BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003148
         (844 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score = 1263 bits (3267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/846 (71%), Positives = 707/846 (83%), Gaps = 3/846 (0%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAK--TTPKDSPSIGSLKNCKTLNELKQPHCHILKQ 58
           MA TL+ S L+ ATPT   L NQ++ K  T  + SP+ GS K CKT+ ELKQ H  I K 
Sbjct: 1   MAATLHLSTLIPATPTSVALPNQNELKILTKHRSSPT-GSFKKCKTMTELKQLHSQITKN 59

Query: 59  GLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGL 118
           GL H P  ++ ++ +C +MGTFESL YAQKA + +I+DN    T +M++SLIRG+S  GL
Sbjct: 60  GLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGL 119

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
           G +AI ++ +L   G +PD FTFPFVL+ACTKS+A  EG QVHGAIVKMGF+RD+FVEN 
Sbjct: 120 GYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENS 179

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           LI+FYGECG+I   RRVFD+MSERNVVSWTSLI   A+R   KEAV LFFEMVE GI+PN
Sbjct: 180 LIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPN 239

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           SVTMV VISACAKLQ+L+LG++VC  I EL ++ NALMVNALVDMYMKCGA+D A+++F 
Sbjct: 240 SVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFD 299

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           EC D+NLVL NTIMSNYVR GLARE LA+L EML HGPRPDR+TMLSAVSA ++L D+ C
Sbjct: 300 ECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSC 359

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G+ CHGYVLRNGLEGWD++CN +I+MYMKCGKQEMACR+FD M NKT VSWNSLIAG ++
Sbjct: 360 GKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVR 419

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           NGD+ESA ++FS MP  D +SWNTM+G L QE+MF+EA+ELFRVM SE I  D+VTMVGV
Sbjct: 420 NGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGV 479

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
           ASACGYLGALDLAKWI+ YI+K  IH DM L TALVDMFARCGDPQ AMQVF +M KRDV
Sbjct: 480 ASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDV 539

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
           SAWTAAIGAMAMEGNG  A+ELF+EML+QGIKPD +VFV +LTA SHGGLV QGWH+FRS
Sbjct: 540 SAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRS 599

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M DI+G++PQ VHYGCMVDLLGRAGLL EAL LI SM +EPNDVIWGSLLAAC+ H+NVD
Sbjct: 600 MKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVD 659

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           IAAYAAERI+ELDPE++G+HVLLSNIYASAG+W +VA+VRL +KE+G  K+PGSSSIE+N
Sbjct: 660 IAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEIN 719

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           GK+ EFT+GDESHPEM +I  ML+E+ CRLRD GYVPDLTNVLLDV+E+EK+YLLS HSE
Sbjct: 720 GKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSE 779

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLA+AF LIST + MPIRV KNLR+C DCHSFAKLVSK Y REIIVRDNNRFHFF+QG C
Sbjct: 780 KLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFC 839

Query: 839 SCSDFW 844
           SC D+W
Sbjct: 840 SCGDYW 845


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score = 1232 bits (3187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/824 (70%), Positives = 691/824 (83%), Gaps = 1/824 (0%)

Query: 21  TNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           T   +A    KDS    SL+ CKTLN+LKQ HC I K GL   PS ++K+V   A++ + 
Sbjct: 14  TQIKEADPMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASP 73

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
           ESL YA+KAF+ + +D  +   LFM NSLIRGYS  GLG EAI LYV +   G+ P+ +T
Sbjct: 74  ESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYT 133

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           FPFVL+ CTK +AF EG+QVHG++VKMG + DVF++NCLI+FY ECG +  G +VF+ MS
Sbjct: 134 FPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMS 193

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           ERNVVSWTSLIC  AR D PKEAV LFFEMVE GI+P+SVTMVCVISACAKL++L++G+R
Sbjct: 194 ERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGER 253

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           VCAYI ELG+K N +MVNALVDMYMKCGA+D AK+LF EC DRNLVL NTI+SNY R GL
Sbjct: 254 VCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGL 313

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           AREALAILDEML  GPRPDRVTMLSA+SASAQL DL  G++CHGYV+RNGLEGWDSI N 
Sbjct: 314 AREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNV 373

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMYMKCGK EMACR+FD MSNKTVVSWNSL AG I+NGDVESA EVF+++P R+ + W
Sbjct: 374 IIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFW 433

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           NTM+ GL Q+++FE+A+ELFR M  E IK DRVTM+G+ASACGYLGA +LAKW++ YIEK
Sbjct: 434 NTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEK 493

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           NGI CDM+L TALVDMFARCGDPQ AMQVF +M +RDVSAWTAAIG MAMEGNGE A  L
Sbjct: 494 NGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGL 553

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           FN+ML QG+KPD ++FV VLTACSHGG V QG H+F  M D HG+SPQI HYGCMVDLLG
Sbjct: 554 FNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLG 612

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAGLL EA DLIKSMP+EPNDV+WGSLLAAC+ H+NV++A YAAERI EL P+++GVHVL
Sbjct: 613 RAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVL 672

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSNIYASAGKWT+VARVRL ++E+G+RK+PGSSS++VNG +HEFTSGDESHPEM +I+ M
Sbjct: 673 LSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALM 732

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L+EMNCR  DAG++PDL+NVLLDVDEQEK+YLLS HSEKLA+AFGLI+T ++MPIRVVKN
Sbjct: 733 LQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKN 792

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCHSFAK+ S +Y+REIIVRDNNRFHFFRQG CSC D+W
Sbjct: 793 LRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score = 1165 bits (3014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/846 (66%), Positives = 681/846 (80%), Gaps = 12/846 (1%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           MA TL PS  +L   ++       +A    ++S S   L NCKTL ELKQ HC ++K+GL
Sbjct: 1   MATTLFPSSTLLVPASLK------EANPITRNSSS-KLLVNCKTLKELKQLHCDMMKKGL 53

Query: 61  -GHKP-SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGL 118
             HKP S ++K++ +  Q+GT ESL YA+ AF     D+   A+LFMYN LIRGY+  GL
Sbjct: 54  LCHKPASNLNKLIASSVQIGTLESLDYARNAFG---DDDGNMASLFMYNCLIRGYASAGL 110

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
           G +AI LYV++   GI+PDK+TFPF+L+AC+K  A  EGVQVHGA++KMG + D+FV N 
Sbjct: 111 GDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNS 170

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           LI+FY ECG +  GR++FD M ERNVVSWTSLI   + RDL KEAV LFF+M E G++PN
Sbjct: 171 LIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPN 230

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            VTMVCVISACAKL++LELG +VC+YI ELGM+ + +MVNALVDMYMKCG +  A+Q+F 
Sbjct: 231 PVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFD 290

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           EC ++NLV+ NTIMSNYV    A + L ILDEML  GPRPD+VTMLS ++A AQLGDL  
Sbjct: 291 ECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSV 350

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G+  H YVLRNGLEGWD+I N +IDMYMKCGK+E AC++F+HM NKTVV+WNSLIAGL++
Sbjct: 351 GKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVR 410

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           +GD+E A  +F EM  RD +SWNTM+G L Q +MFEEA+ELFR M ++ I  DRVTMVG+
Sbjct: 411 DGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGI 470

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
           ASACGYLGALDLAKW+  YIEKN IH D+QL TALVDMF+RCGDP  AM VF+RMEKRDV
Sbjct: 471 ASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDV 530

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
           SAWTAAIG MAMEGN E A+ELFNEML Q +KPD +VFV +LTACSHGG V+QG  LF S
Sbjct: 531 SAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWS 590

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M   HG+ P IVHYGCMVDLLGRAGLL EA+DLI+SMP+EPNDV+WGSLLAAC+KH+NV+
Sbjct: 591 MEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVE 650

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +A YAAE++T+L PE+ G+HVLLSNIYASAGKWT+VARVRLQMKE+G++K+PGSSSIEV 
Sbjct: 651 LAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQ 710

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           G +HEFTSGDESH E  +I  ML E+NCRL +AGYVPD TNVLLDVDEQEK++LLS HSE
Sbjct: 711 GLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSE 770

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLAMA+GLI+T + +PIRVVKNLR+C DCHSFAKLVSK+Y+REI VRDNNR+HFF++G C
Sbjct: 771 KLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFC 830

Query: 839 SCSDFW 844
           SC D+W
Sbjct: 831 SCRDYW 836


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score = 1105 bits (2859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/833 (64%), Positives = 652/833 (78%), Gaps = 13/833 (1%)

Query: 18  TTLTNQHKAKT-----TPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVC 72
           TT T  H++ +     T    P   SL+ CKTL ELKQ HC++LK+G+ +    I+K++ 
Sbjct: 3   TTTTTLHQSSSPLLLPTTTQKPKNSSLQTCKTLIELKQLHCNMLKKGVFN----INKLIA 58

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-G 131
            C QMGT ESL YA  AF    +D  T  +L+  N+LIRGY+  GL  EAI +Y+ +   
Sbjct: 59  ACVQMGTHESLNYALNAFK---EDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIV 115

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            GI+PD FTFPF+L+AC+K  AF EGVQVHG +VKMG  +D+FV N LI+FY  CG +  
Sbjct: 116 MGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDL 175

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
           GR+VFDEM ERNVVSWTSLI   +  ++ KEAV LFFEMVE G++PN VTMVC ISACAK
Sbjct: 176 GRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAK 235

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L++LELG +VC  + ELG+K+N L+VNAL+DMYMKCG +   +++F E  D+NLV+ NTI
Sbjct: 236 LKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTI 295

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           MSNYV+ GLA E L +LDEML  G RPD+VTMLS ++A AQLGDL  G+  H YV RNGL
Sbjct: 296 MSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGL 355

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           E  D+I N +IDMYMKCGK+E AC++FD MSNKTVV+WNSLIAGL+++G++E A  +F E
Sbjct: 356 ERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGE 415

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           MP  + +SWNTM+G + Q +MFEEA++L R M ++ IK DRVTMVG+ASACGYLGALDLA
Sbjct: 416 MPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLA 475

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           KWIY YIEKN IH DMQL TALVDMF+RCGDP  AM+VF  MEKRDVSAWTAAI   A+E
Sbjct: 476 KWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVE 535

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           GN + A+ELF+EML+Q +K D  VFV +LTA SHGG V+QG  LF +M  IHGVSPQIVH
Sbjct: 536 GNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVH 595

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           YGCMVDLLGRAGLL EA DL+KSMP++PNDVIWGS LAAC+KH+NV+ A YA E+IT+L 
Sbjct: 596 YGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLA 655

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           PEK G+HVLLSNIYASAGKW +VARVRLQMKE+G +K+ GSSSIEV+G + EFTSGDESH
Sbjct: 656 PEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESH 715

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
            E   I  ML+E+NCR+   GYVPD TNVL+DVDEQEK++LLS HSEKLAMA+GLI+T K
Sbjct: 716 TENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGK 775

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +PIRVVKNLR+C DCHSFAKLVSK+Y REI VRDNNR+HFF++G CSC DFW
Sbjct: 776 GIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/845 (61%), Positives = 661/845 (78%), Gaps = 15/845 (1%)

Query: 5   LNPSPLVLATPTVT--TLTNQHK-AKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLG 61
           L+ SP+VLAT T T  +L NQ K  K TP       SLKNCKT++ELK  H  + KQGL 
Sbjct: 8   LHLSPMVLATTTTTKPSLLNQSKCTKATPS------SLKNCKTIDELKMFHRSLTKQGLD 61

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
           +  S I+K+V    ++GT ESL++A++ F+    ++E+  T FMYNSLIRGY+  GL  E
Sbjct: 62  NDVSTITKLVARSCELGTRESLSFAKEVFE----NSESYGTCFMYNSLIRGYASSGLCNE 117

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           AI L++ +   GI PDK+TFPF L+AC KS A G G+Q+HG IVKMG+ +D+FV+N L++
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSV 240
           FY ECG++   R+VFDEMSERNVVSWTS+IC  ARRD  K+AV LFF MV +E + PNSV
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           TMVCVISACAKL++LE G++V A+I   G++ N LMV+ALVDMYMKC A+D AK+LF E 
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
              NL LCN + SNYVR GL REAL + + M+  G RPDR++MLSA+S+ +QL ++L G+
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
            CHGYVLRNG E WD+ICN +IDMYMKC +Q+ A RIFD MSNKTVV+WNS++AG ++NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS-ERIKVDRVTMVGVA 479
           +V++A E F  MP ++ +SWNT++ GL Q ++FEEA+E+F  M S E +  D VTM+ +A
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           SACG+LGALDLAKWIY YIEKNGI  D++L T LVDMF+RCGDP+ AM +F  +  RDVS
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
           AWTAAIGAMAM GN E+A+ELF++M+ QG+KPD + FVG LTACSHGGLV QG  +F SM
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
             +HGVSP+ VHYGCMVDLLGRAGLL EA+ LI+ MP+EPNDVIW SLLAAC+   NV++
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657

Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
           AAYAAE+I  L PE++G +VLLSN+YASAG+W ++A+VRL MKE+G+RK PG+SSI++ G
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717

Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEK 779
           K HEFTSGDESHPEM NI +ML E++ R    G+VPDL+NVL+DVDE+EK ++LS HSEK
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEK 777

Query: 780 LAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCS 839
           LAMA+GLIS++K   IR+VKNLR+C DCHSFAK  SKVY+REII+RDNNRFH+ RQG CS
Sbjct: 778 LAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCS 837

Query: 840 CSDFW 844
           C DFW
Sbjct: 838 CGDFW 842


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score = 1060 bits (2742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/844 (61%), Positives = 660/844 (78%), Gaps = 15/844 (1%)

Query: 5   LNPSPLVLATPTVT--TLTNQHK-AKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLG 61
           L+ SP+VLAT T T  +L NQ K  K TP       SLKNCKT++ELK  H  + KQGL 
Sbjct: 8   LHLSPMVLATTTTTKPSLLNQSKCTKATP------SSLKNCKTIDELKMFHRSLTKQGLD 61

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
           +  S I+K+V    ++GT ESL++A++ F+    ++E+  T FMYNSLIRGY+  GL  E
Sbjct: 62  NDVSTITKLVARSCELGTRESLSFAKEVFE----NSESYGTCFMYNSLIRGYASSGLCNE 117

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           AI L++ +   GI PDK+TFPF L+AC KS A G G+Q+HG IVKMG+ +D+FV+N L++
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSV 240
           FY ECG++   R+VFDEMSERNVVSWTS+IC  ARRD  K+AV LFF MV +E + PNSV
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           TMVCVISACAKL++LE G++V A+I   G++ N LMV+ALVDMYMKC A+D AK+LF E 
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
              NL LCN + SNYVR GL REAL + + M+  G RPDR++MLSA+S+ +QL ++L G+
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
            CHGYVLRNG E WD+ICN +IDMYMKC +Q+ A RIFD MSNKTVV+WNS++AG ++NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS-ERIKVDRVTMVGVA 479
           +V++A E F  MP ++ +SWNT++ GL Q ++FEEA+E+F  M S E +  D VTM+ +A
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           SACG+LGALDLAKWIY YIEKNGI  D++L T LVDMF+RCGDP+ AM +F  +  RDVS
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
           AWTAAIGAMAM GN E+A+ELF++M+ QG+KPD + FVG LTACSHGGLV QG  +F SM
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
             +HGVSP+ VHYGCMVDLLGRAGLL EA+ LI+ MP+EPNDVIW SLLAAC+   NV++
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657

Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
           AAYAAE+I  L PE++G +VLLSN+YASAG+W ++A+VRL MKE+G+RK PG+SSI++ G
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717

Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEK 779
           K HEFTSGDESHPEM NI +ML E++ R    G+VPDL+NVL+DVDE+EK ++LS HSEK
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEK 777

Query: 780 LAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCS 839
           LAMA+GLIS++K   IR+VKNLR+C DCHSFAK  SKVY+REII+RDNNRFH+ RQG CS
Sbjct: 778 LAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCS 837

Query: 840 CSDF 843
           C DF
Sbjct: 838 CGDF 841


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score = 1050 bits (2715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/843 (61%), Positives = 653/843 (77%), Gaps = 14/843 (1%)

Query: 5   LNPSPLVLATPTVT-TLTNQHK-AKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGH 62
           L+ SP+VLA  T   +L NQ K  K TP       SLKNCKT++ELK  H  + KQGL  
Sbjct: 8   LHFSPMVLAISTSKPSLPNQSKRTKATP------SSLKNCKTIDELKMFHLSLTKQGLDD 61

Query: 63  KPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEA 122
             S I+K+V    ++GT ESL++A++ F+    + E+  T FMYNSLIRGY+  GL  EA
Sbjct: 62  DVSAITKLVARSCELGTRESLSFAKEVFE----NGESYGTCFMYNSLIRGYASSGLCKEA 117

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           I L++ +   GI PDK+TFPF L+ C KS   G G+Q+HG I+KM + +D+FV+N L++F
Sbjct: 118 ILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHF 177

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVT 241
           Y ECG++   R+VFDEMSERNVVSWTS+IC  ARR+  K+AV LFF MV +E + PNSVT
Sbjct: 178 YAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVT 237

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           MVCVISACAKL++LE G++V  +I + G++ N LM++ALVDMYMKC A+D AK+LF E  
Sbjct: 238 MVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYG 297

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
             NL LCN + SNYVR GL +EAL +L+ M+  G RPDR++MLSA+S+ +QL ++L G+ 
Sbjct: 298 ASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKS 357

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
           CHGYVLRNG E WD+ICN +IDMYMKC +Q+ A RIFD MSNKTVV+WNS++AG I+NG+
Sbjct: 358 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGE 417

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVAS 480
           V++A E F+ MP ++ +SWNT++  L QENM+EEA+E+F  M S+  + VD VTM+ +AS
Sbjct: 418 VDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIAS 477

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           ACG+LGALDLAKWIY YIEKN I  D++L T LVDMF+RCGDP+ AM +F  +  RDVSA
Sbjct: 478 ACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 537

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           WTAAIGAMAM GN E+A+ELFNEM+ QG+KPD +VF+G LTAC HGGLV QG  +F SM 
Sbjct: 538 WTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSME 597

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            +HGVSP+ VHYGCMVDLLGRAGLL EAL LIK MP EPNDVIW SLLAAC+   NV++A
Sbjct: 598 KLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMA 657

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
           A+AAE+I  L PE++G +VLLSN+YASAG+W ++A+VRL MKE+G+RK PG+S I++ GK
Sbjct: 658 AFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGK 717

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
            HEFTSGDESHPEM  I +ML E++ R  D G+VPDL+NVL+DVDEQEK ++LS HSEKL
Sbjct: 718 THEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKL 777

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           AMAFGLIS++K   IR+VKNLR+C  CHSFAK  SKVY+REII+RDNNRFHF RQG CSC
Sbjct: 778 AMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSC 837

Query: 841 SDF 843
           SDF
Sbjct: 838 SDF 840


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/595 (55%), Positives = 420/595 (70%), Gaps = 40/595 (6%)

Query: 289 AVDTAKQLFGECK-----DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           ++D A++ F   K     D  L + N+++  Y   GL REA+ +   ML+ G  P+  T 
Sbjct: 75  SLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTF 134

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
              +S   ++     G   HG V++ GLE    I N +I  Y +CG  +   ++F+ MS 
Sbjct: 135 PFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE 194

Query: 404 KTVVSWNSLIAGL-----------------------------IKNGDVESAREVFSEMPG 434
           + VVSW SLI G                              +K G +++A+ +F E   
Sbjct: 195 RNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVD 254

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-- 492
           R+ + +NT+L    ++ +  EA+ +   ML +  + DRVTM+   SA   L  L   K  
Sbjct: 255 RNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVC 314

Query: 493 ---WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
              W++ YIEKNGI CDM+L TALVDMFARCGDPQ AMQVF +M +RDVSAWTAAIG MA
Sbjct: 315 HGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMA 374

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
           MEGNGE A  LFN+ML QG+KPD ++FV VLTACSHGG V QG H+F  M D HG+SPQI
Sbjct: 375 MEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQI 433

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HYGCMVDLLGRAGLL EA DLIKSMP+EPNDV+WGSLLAAC+ H+NV++A YAAERI E
Sbjct: 434 EHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINE 493

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           L P+++GVHVLLSNIYASAGKWT+VARVRL ++E+G+RK+PGSSS++VNG +HEFTSGDE
Sbjct: 494 LAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDE 553

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SHPEM +I+ ML+EMNCR  DAG++PDL+NVLLDVDEQEK+YLLS HSEKLA+AFGLI+T
Sbjct: 554 SHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIAT 613

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            ++MPIRVVKNLR+C DCHSFAK+ S +Y+REIIVRDNNRFHFFRQG CSC D+W
Sbjct: 614 GRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668



 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/557 (43%), Positives = 322/557 (57%), Gaps = 83/557 (14%)

Query: 21  TNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           T   +A    KDS    SL+ CKTLN+LKQ HC I K GL   PS ++K+V   A++ + 
Sbjct: 14  TQIKEADPMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASP 73

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
           ESL YA+KAF+ + +D  +   LFM NSLIRGYS  GLG EAI LYV +   G+ P+ +T
Sbjct: 74  ESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYT 133

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           FPFVL+ CTK +AF EG+QVHG++VKMG + DVF++NCLI+FY ECG +  G +VF+ MS
Sbjct: 134 FPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMS 193

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           ERNVVSWTSLIC  AR D PKEAV LFFEM+                             
Sbjct: 194 ERNVVSWTSLICGYARGDRPKEAVSLFFEML----------------------------- 224

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
                       N +MVNALVDMYMKCGA+D AK+LF EC DRNLVL NTI+SNY R GL
Sbjct: 225 ------------NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGL 272

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG-----YVLRNGLEGWD 375
           AREALAILDEML  GPRPDRVTMLSA+SASAQL DL  G++CHG     Y+ +NG+    
Sbjct: 273 AREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDM 332

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +   ++DM+ +CG  + A ++F+ M+ + V +W + I  +   G+ E A  +F++    
Sbjct: 333 RLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQ---- 388

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                                      ML + +K D V  V V +AC + G ++    I+
Sbjct: 389 ---------------------------MLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF 421

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR--MEKRDVSAWTAAIGAMAMEGN 553
           + +E +GI   ++    +VD+  R G  + A  + +   ME  DV  W + + A  +  N
Sbjct: 422 SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDV-VWGSLLAACRVHKN 480

Query: 554 GEQAV---ELFNEMLRQ 567
            E A    E  NE+  Q
Sbjct: 481 VEMATYAAERINELAPQ 497


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 289/688 (42%), Positives = 442/688 (64%), Gaps = 2/688 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           QVH   +K G + +  ++N ++ F    E GD    RR+FDE+ E N+  W ++I   +R
Sbjct: 57  QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSR 116

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
            D P+  V L+ EM+  G+KP+  T   +     +   LE G ++  ++ + G++ N  +
Sbjct: 117 LDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFV 176

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             ALV MY+ CG +DTA+ +F  C   +++  N I+S Y ++G   E+  +   M     
Sbjct: 177 HTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQV 236

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            P  VT++  +SA ++L DL  G+  H YV    +E    + N MIDMY  CG+ + A  
Sbjct: 237 LPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALG 296

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           IF  M+N+ ++SW ++++G    G+++ AR  F +MP +D++SW  M+ G  + N F+EA
Sbjct: 297 IFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEA 356

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +ELFR M +  +K D  TMV V +AC +LGAL+L +WI  YI++N I  D+ +  AL+DM
Sbjct: 357 LELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDM 416

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CGD  +A  +FR M +RD   WTA I  +A+ G+GE+A+++F+ ML+  I PD I +
Sbjct: 417 YFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITY 476

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVL+AC+H GLV++G   F  MT  HG+ P I HYGC+VDLL RAG L EA ++I++MP
Sbjct: 477 IGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP 536

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           ++ N ++WG+LLA C+ ++  D+A    ++I EL+P+   V+VLL NIYA+  +W ++  
Sbjct: 537 IKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRE 596

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R  M ++GI+K PG S IE+NG+VHEF +GD SHP+  NI + L +M   L+ AGY PD
Sbjct: 597 LRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPD 656

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           ++ V LD+ E++K+  +  HSEKLA+AFGLI++   + IR+ KNLR+C DCH+ AKLVSK
Sbjct: 657 ISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSK 716

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VY+RE+IVRD  RFH F+ G CSC D+W
Sbjct: 717 VYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  275 bits (703), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 175/595 (29%), Positives = 291/595 (48%), Gaps = 80/595 (13%)

Query: 29  TPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCA--QMGTFESLTYA 86
           +P   P I  L+ C+++++L+Q HC  +K+GL   P   ++V+  C   + G F+   YA
Sbjct: 36  SPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ---YA 92

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ FD   + N     LF++N++IRGYS +      +SLY+E+   G+ PD++TFPF+  
Sbjct: 93  RRLFDEIPEPN-----LFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 147

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
             T+  A   G Q+HG ++K G   +VFV   L+  Y  CG +   R VFD   + +V++
Sbjct: 148 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVIT 207

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W  +I A  +    +E+  LF  M ++ + P +VT+V V+SAC+KL++L  G +V +Y+ 
Sbjct: 208 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 267

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG---LAR- 322
              +++N ++ NA++DMY  CG +D+A  +F    +R+++   TI+S +  LG   +AR 
Sbjct: 268 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 327

Query: 323 ---------------------------EALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
                                      EAL +   M     +PD  TM+S ++A A LG 
Sbjct: 328 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 387

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L  G     Y+ RN ++    + N +IDMY KCG  + A  IF  MS +   +W ++I G
Sbjct: 388 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 447

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
           L  NG  E A ++FS                                ML   I  D +T 
Sbjct: 448 LAVNGHGEKALDMFSN-------------------------------MLKASILPDEITY 476

Query: 476 VGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +GV SAC + G +D   K+      ++GI  ++     LVD+ AR G  + A +V   M 
Sbjct: 477 IGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP 536

Query: 535 -KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS----IVFVGVLTACS 584
            K +   W A +    +    + A  +  ++L   ++PD+    ++   +  AC 
Sbjct: 537 IKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYVLLCNIYAACK 589


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 289/688 (42%), Positives = 442/688 (64%), Gaps = 2/688 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           QVH   +K G + +  ++N ++ F    E GD    RR+FDE+ E N+  W ++I   +R
Sbjct: 36  QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSR 95

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
            D P+  V L+ EM+  G+KP+  T   +     +   LE G ++  ++ + G++ N  +
Sbjct: 96  LDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFV 155

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             ALV MY+ CG +DTA+ +F  C   +++  N I+S Y ++G   E+  +   M     
Sbjct: 156 HTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQV 215

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            P  VT++  +SA ++L DL  G+  H YV    +E    + N MIDMY  CG+ + A  
Sbjct: 216 LPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALG 275

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           IF  M+N+ ++SW ++++G    G+++ AR  F +MP +D++SW  M+ G  + N F+EA
Sbjct: 276 IFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEA 335

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +ELFR M +  +K D  TMV V +AC +LGAL+L +WI  YI++N I  D+ +  AL+DM
Sbjct: 336 LELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDM 395

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CGD  +A  +FR M +RD   WTA I  +A+ G+GE+A+++F+ ML+  I PD I +
Sbjct: 396 YFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITY 455

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVL+AC+H GLV++G   F  MT  HG+ P I HYGC+VDLL RAG L EA ++I++MP
Sbjct: 456 IGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP 515

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           ++ N ++WG+LLA C+ ++  D+A    ++I EL+P+   V+VLL NIYA+  +W ++  
Sbjct: 516 IKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRE 575

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R  M ++GI+K PG S IE+NG+VHEF +GD SHP+  NI + L +M   L+ AGY PD
Sbjct: 576 LRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPD 635

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           ++ V LD+ E++K+  +  HSEKLA+AFGLI++   + IR+ KNLR+C DCH+ AKLVSK
Sbjct: 636 ISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSK 695

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VY+RE+IVRD  RFH F+ G CSC D+W
Sbjct: 696 VYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/607 (29%), Positives = 294/607 (48%), Gaps = 80/607 (13%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCA 75
           T    T+      +P   P I  L+ C+++++L+Q HC  +K+GL   P   ++V+  C 
Sbjct: 2   TTIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCC 61

Query: 76  --QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
             + G F+   YA++ FD   + N     LF++N++IRGYS +      +SLY+E+   G
Sbjct: 62  THEYGDFQ---YARRLFDEIPEPN-----LFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG 113

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + PD++TFPF+    T+  A   G Q+HG ++K G   +VFV   L+  Y  CG +   R
Sbjct: 114 VKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTAR 173

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            VFD   + +V++W  +I A  +    +E+  LF  M ++ + P +VT+V V+SAC+KL+
Sbjct: 174 GVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLK 233

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +L  G +V +Y+    +++N ++ NA++DMY  CG +D+A  +F    +R+++   TI+S
Sbjct: 234 DLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVS 293

Query: 314 NYVRLG---LAR----------------------------EALAILDEMLLHGPRPDRVT 342
            +  LG   +AR                            EAL +   M     +PD  T
Sbjct: 294 GFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFT 353

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M+S ++A A LG L  G     Y+ RN ++    + N +IDMY KCG  + A  IF  MS
Sbjct: 354 MVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS 413

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            +   +W ++I GL  NG  E A ++FS                                
Sbjct: 414 QRDKFTWTAMIVGLAVNGHGEKALDMFSN------------------------------- 442

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           ML   I  D +T +GV SAC + G +D   K+      ++GI  ++     LVD+ AR G
Sbjct: 443 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG 502

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS----IVF 576
             + A +V   M  K +   W A +    +    + A  +  ++L   ++PD+    ++ 
Sbjct: 503 RLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYVLL 560

Query: 577 VGVLTAC 583
             +  AC
Sbjct: 561 CNIYAAC 567


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 320/870 (36%), Positives = 502/870 (57%), Gaps = 63/870 (7%)

Query: 8   SPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYI 67
           SP +   PT+    N   + +  +    I  LK+C  + E    H H++   L H P   
Sbjct: 15  SPSIHKPPTL----NPKTSHSVLRPHWIIDLLKSCSNIREFSPIHAHLITANLIHDPEIT 70

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
           S+V+   A + +  +L  A +   Y    +E  + +  +N+L+      G   E +  Y 
Sbjct: 71  SQVL---AFLLSVNNLDCAHQILSY---SHEPESII--WNTLLENKLKEGCPQEVLECYY 122

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +   G+L D  TF F+++AC K+     G +VHG I+K GF R+  + N L+  Y +CG
Sbjct: 123 HMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCG 182

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            + +  ++F++M+ R+V+SW ++I     + + +EA+ LF EM+  G+ P+ +TMV ++S
Sbjct: 183 KLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVS 242

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA------------------ 289
            CAKL++LE+G R+  YI +  +     ++N LVDMY KCG                   
Sbjct: 243 TCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDV 302

Query: 290 ---------------VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
                          +D A+QLF +  +R+LV   T+MS YV+ G   E+L +  +M   
Sbjct: 303 VLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFE 362

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
              PD V +++ +SA   L D   GR  H +++  G+     + N ++D+Y KCGK + A
Sbjct: 363 NVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEA 422

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            R F+ +  K+  SWNS++ G  ++G V+ AR+ F+++P +D +SWNTM+    + ++F 
Sbjct: 423 LRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFN 482

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           E+ E+F  M S  +K D+ T++ + S+C  +GAL+   W+  YIEKN I  D  L TAL+
Sbjct: 483 ESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALI 542

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+ +CG  + A ++F ++ +++V  WTA + A AMEG   +A++L+ EM  +G+KPD +
Sbjct: 543 DMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHV 602

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ +L ACSHGGLV++G+  F  +   + + P I HYGCMVDLLGR G L E +  I+ 
Sbjct: 603 TFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIER 662

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+EP+  IW SL+ AC+ H NV++A  A +++ E+DP  +G HVLLSNIYA AG+W +V
Sbjct: 663 MPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDV 722

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           ++VR ++ E G+ K PG + IE NG VHEF +   S+    +I  ML+++  RL     +
Sbjct: 723 SKVRTKLHETGVPKQPGFTMIEQNGVVHEFVA---SNLVSADILCMLQDIERRLLVKQEL 779

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
            D T               S HSE+LA+AFGLI+  +  PIRVV ++R+C DCHS  KL+
Sbjct: 780 SDTT---------------SQHSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLI 824

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S+ YDREI++RDN RFH F  G CSC D+W
Sbjct: 825 SQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 308/712 (43%), Positives = 432/712 (60%), Gaps = 41/712 (5%)

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           F  P VL AC + S    G ++HG ++K G DRDVFV N L+  YGEC  +   R VFD+
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M ER+VVSW+++I + +R      A+ L  EM    ++P+ V MV +++  A   N+ +G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 259 DRVCAYI------DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             + AY+      + +G+        AL+DMY KCG +  A+QLF     + +V    ++
Sbjct: 215 KAMHAYVIRNSNNEHMGVPT----TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMI 270

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           +  +R     E   +   M      P+ +TMLS +      G L  G+  H Y+LRNG  
Sbjct: 271 AGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFS 330

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
              ++   ++DMY KC                                D+ +AR +F   
Sbjct: 331 VSLALATALVDMYGKCS-------------------------------DIRNARALFDST 359

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             RD + W  ML    Q N  ++A  LF  M +  ++  +VT+V + S C   GALDL K
Sbjct: 360 QNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK 419

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
           W+++YI+K  +  D  L TALVDM+A+CGD   A ++F     RD+  W A I   AM G
Sbjct: 420 WVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHG 479

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            GE+A+++F EM RQG+KP+ I F+G+L ACSH GLV +G  LF  M    G+ PQI HY
Sbjct: 480 YGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHY 539

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GCMVDLLGRAGLL EA ++IKSMP++PN ++WG+L+AAC+ H+N  +   AA ++ E++P
Sbjct: 540 GCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEP 599

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           E  G +VL+SNIYA+A +W++ A VR  MK  G++K PG S IEVNG VHEF  GD+SHP
Sbjct: 600 ENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHP 659

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           ++  I+ ML EM  +L +AGYVPD + VLL++DE+EK+  L++HSEKLAMAFGLIST+ +
Sbjct: 660 QIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPS 719

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PIR+VKNLR+C DCH+  KL+SK+Y R IIVRD NRFH FR+G CSC D+W
Sbjct: 720 TPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 165/323 (51%), Gaps = 10/323 (3%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           T  T+  + ++I G        E   L++ +    I P++ T   ++  C  + A   G 
Sbjct: 259 TQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGK 318

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+H  I++ GF   + +   L++ YG+C DI + R +FD    R+V+ WT+++ A A+ +
Sbjct: 319 QLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQAN 378

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
              +A  LF +M   G++P  VT+V ++S CA    L+LG  V +YID+  ++ + ++  
Sbjct: 379 CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT 438

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           ALVDMY KCG ++ A +LF E   R++ + N I++ +   G   EAL I  EM   G +P
Sbjct: 439 ALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKP 498

Query: 339 DRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           + +T +  + A +  G +  G     +M H + L   +E +      M+D+  + G  + 
Sbjct: 499 NDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHY----GCMVDLLGRAGLLDE 554

Query: 394 ACRIFDHMSNK-TVVSWNSLIAG 415
           A  +   M  K   + W +L+A 
Sbjct: 555 AHEMIKSMPIKPNTIVWGALVAA 577



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 9/250 (3%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           KQ H +IL+ G     +  + +V      G    +  A+  FD     +  +  + ++ +
Sbjct: 318 KQLHAYILRNGFSVSLALATALV---DMYGKCSDIRNARALFD-----STQNRDVMIWTA 369

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           ++  Y+      +A +L+ ++   G+ P K T   +L+ C  + A   G  VH  I K  
Sbjct: 370 MLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER 429

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            + D  +   L++ Y +CGDI    R+F E   R++  W ++I   A     +EA+ +F 
Sbjct: 430 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 489

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVDMYMKC 287
           EM  +G+KPN +T + ++ AC+    +  G ++    +   G+         +VD+  + 
Sbjct: 490 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 549

Query: 288 GAVDTAKQLF 297
           G +D A ++ 
Sbjct: 550 GLLDEAHEMI 559


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 304/740 (41%), Positives = 448/740 (60%), Gaps = 31/740 (4%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           ++   I GY   G   +A+ LY ++   GI PDK  F  V+ AC   S    G +VH  I
Sbjct: 87  VWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDI 146

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           +  GF+ DV V   L + Y +CG + + R+VFD M +R+VVSW ++I   ++   P EA+
Sbjct: 147 IARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEAL 206

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            LF EM   GIKPNS T+V V+  CA L  LE G ++  Y    G++++ L+VN LV+MY
Sbjct: 207 ALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMY 266

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KCG V+TA +LF     R++   N I+  Y       EALA  + M + G +P+ +TM+
Sbjct: 267 AKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMV 326

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A A L  L  G+  HGY +R+G E  D + N +++MY KCG               
Sbjct: 327 SVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCG--------------- 371

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                           +V SA ++F  MP ++ ++WN ++ G +Q     EA+ LF  M 
Sbjct: 372 ----------------NVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQ 415

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           ++ IK D   +V V  AC +  AL+  K I+ Y  ++G   ++ + T LVD++A+CG+  
Sbjct: 416 AQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVN 475

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A ++F RM ++DV +WT  I A  + G+GE A+ LF++M   G K D I F  +LTACS
Sbjct: 476 TAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACS 535

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLV+QG   F+ M   +G++P++ HY C+VDLLGRAG L EA  +IK+M +EP+  +W
Sbjct: 536 HAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVW 595

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
           G+LL AC+ H N+++   AA+ + ELDP+ +G +VLLSNIYA A +W +VA++R  MKE+
Sbjct: 596 GALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEK 655

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
           G++K PG S + V+  V  F  GD +HP+   I +ML  +  ++R AGYVP+    L DV
Sbjct: 656 GVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDV 715

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           +E+ K+ +LS HSEKLA++FG+I+TS  +PIR++KNLR+C DCH+  K +SK+  REIIV
Sbjct: 716 EEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIV 775

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD NRFH  + G CSC D+W
Sbjct: 776 RDANRFHHVKNGFCSCGDYW 795



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 228/452 (50%), Gaps = 33/452 (7%)

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N V W   I    +     +A+ L+++M   GI P+ +  + VI AC    +L+ G +V 
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
             I   G +++ ++  AL  MY KCG+++ A+Q+F     R++V  N I++ Y + G   
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EALA+  EM ++G +P+  T++S +   A L  L  G+  H Y +R+G+E    + N ++
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           +MY KCG    A ++F+ M  + V SWN++I                             
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAII----------------------------- 294

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
             GG +  +   EA+  F  M    IK + +TMV V  AC +L AL+  + I+ Y  ++G
Sbjct: 295 --GGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSG 352

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
              +  +  ALV+M+A+CG+   A ++F RM K++V AW A I   +  G+  +A+ LF 
Sbjct: 353 FESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFI 412

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           EM  QGIKPDS   V VL AC+H   + QG  +    T   G    +V    +VD+  + 
Sbjct: 413 EMQAQGIKPDSFAIVSVLPACAHFLALEQGKQI-HGYTIRSGFESNVVVGTGLVDIYAKC 471

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           G +  A  L + MP E + V W +++ A   H
Sbjct: 472 GNVNTAQKLFERMP-EQDVVSWTTMILAYGIH 502



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 15/254 (5%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
            L + +Q H + ++ G        + +V   A+ G   S   A K F+   K N     +
Sbjct: 337 ALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNS---AYKLFERMPKKN-----V 388

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
             +N++I GYS  G   EA++L++E+   GI PD F    VL AC    A  +G Q+HG 
Sbjct: 389 VAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGY 448

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
            ++ GF+ +V V   L++ Y +CG++   +++F+ M E++VVSWT++I A       ++A
Sbjct: 449 TIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDA 508

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID----ELGMKANALMVNA 279
           + LF +M E G K + +    +++AC+   +  L D+   Y      + G+         
Sbjct: 509 LALFSKMQETGTKLDHIAFTAILTACS---HAGLVDQGLQYFQCMKSDYGLAPKLEHYAC 565

Query: 280 LVDMYMKCGAVDTA 293
           LVD+  + G +D A
Sbjct: 566 LVDLLGRAGHLDEA 579



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 6/144 (4%)

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           + +   W   I      G   +A+ L+ +M R GI PD +VF+ V+ AC     +  G  
Sbjct: 82  RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAA-CQ 652
           +   +    G    ++    +  +  + G L  A  +   MP    DV+ W +++A   Q
Sbjct: 142 VHEDII-ARGFESDVIVGTALASMYTKCGSLENARQVFDRMP--KRDVVSWNAIIAGYSQ 198

Query: 653 KHQNVD-IAAYAAERITELDPEKS 675
             Q  + +A ++  ++  + P  S
Sbjct: 199 NGQPYEALALFSEMQVNGIKPNSS 222


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 300/770 (38%), Positives = 459/770 (59%), Gaps = 10/770 (1%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           FE +  A++ F        T   +  ++S+I  Y+      +A   +  +    I P++ 
Sbjct: 104 FEDVASAEQVFRRM-----TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           TF  +L AC   S   +G ++H  +  MG + DV V   LI  Y +CG+I     VF +M
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           +ERNVVSWT++I A A+     EA  L+ +M++ GI PN+VT V ++++C   + L  G 
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           R+ ++I E G++ + ++ NAL+ MY KC +V  A+++F     R+++  + +++ Y + G
Sbjct: 279 RIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSG 338

Query: 320 LAR-----EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
                   E   +L+ M   G  P++VT +S + A    G L  GR  H  + + G E  
Sbjct: 339 YKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELD 398

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
            S+   + +MY KCG    A ++F  M+NK VV+W S ++  IK GD+ SA +VFSEMP 
Sbjct: 399 RSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPT 458

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           R+ +SWN M+ G  Q     +  EL   M +E  + DRVT++ +  ACG L  L+  K +
Sbjct: 459 RNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLV 518

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +A   K G+  D  +AT+L+ M+++CG    A  VF +M  RD  AW A +      G+G
Sbjct: 519 HAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDG 578

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
            +AV+LF  ML++ + P+ I    V++ACS  GLV +G  +FR M +   ++P+  HYGC
Sbjct: 579 LEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGC 638

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           MVDLLGRAG L EA + I+SMP EP+  +W +LL AC+ H NV +A  AA  I EL+P  
Sbjct: 639 MVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSY 698

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
           + V++ LSNIYA AG+W +  +VR  M ++G++K  G SSIE++G++H F + D +HPE+
Sbjct: 699 ASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEI 758

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
           + I + L  +   +++AGY PD+  VL DVD+ +K+  L HHSEKLA+A+GL+ T    P
Sbjct: 759 DAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTP 818

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           IR++KNLR+C DCH+  K +SK+  REI+ RD NRFH+F  G+CSC DFW
Sbjct: 819 IRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 159/567 (28%), Positives = 265/567 (46%), Gaps = 63/567 (11%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           EAI L   +   G+L +  T+  V+  C K+  F +G  VH  + ++G + D+++ N LI
Sbjct: 39  EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           NFY +  D+    +VF  M+ R+VV+W+S+I A A  + P +A   F  M +  I+PN +
Sbjct: 99  NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T + ++ AC     LE G ++   +  +GM+ +  +  AL+ MY KCG +  A ++F + 
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            +RN+V    I+    +     EA  + ++ML  G  P+ VT +S +++      L  GR
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H ++   GLE    + N +I MY KC   + A  IFD MS + V+SW+++IAG  ++G
Sbjct: 279 RIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSG 338

Query: 421 --DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
             D ES  EVF                            +L   M  E +  ++VT + +
Sbjct: 339 YKDKESIDEVF----------------------------QLLERMRREGVFPNKVTFMSI 370

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC   GAL+  + I+A + K G   D  L TA+ +M+A+CG    A QVF +M  ++V
Sbjct: 371 LRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV 430

Query: 539 SAWTA-------------------------------AIGAMAMEGNGEQAVELFNEMLRQ 567
            AWT+                                I   A  G+  +  EL + M  +
Sbjct: 431 VAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAE 490

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G +PD +  + +L AC     + +G  L  +     G+    V    ++ +  + G + E
Sbjct: 491 GFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAE 549

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKH 654
           A  +   M    + V W ++LA   +H
Sbjct: 550 ARTVFDKMS-NRDTVAWNAMLAGYGQH 575



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 228/493 (46%), Gaps = 43/493 (8%)

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           +EA+ L   + + G+  NS T  CVI  CAK +  E G  V   +DELG++ +  + N+L
Sbjct: 38  REAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSL 97

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           ++ Y K   V +A+Q+F     R++V  +++++ Y       +A    + M      P+R
Sbjct: 98  INFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNR 157

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           +T LS + A      L  GR  H  V   G+E   ++   +I MY KCG+  +AC +F  
Sbjct: 158 ITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M+ + VVSW ++I                                   Q     EA EL+
Sbjct: 218 MTERNVVSWTAIIQ-------------------------------ANAQHRKLNEAFELY 246

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
             ML   I  + VT V + ++C    AL+  + I+++I + G+  DM +A AL+ M+ +C
Sbjct: 247 EQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKC 306

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG-----NGEQAVELFNEMLRQGIKPDSIV 575
              Q A ++F RM KRDV +W+A I   A  G     + ++  +L   M R+G+ P+ + 
Sbjct: 307 NSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVT 366

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F+ +L AC+  G + QG  +   ++ + G          + ++  + G + EA  +   M
Sbjct: 367 FMSILRACTAHGALEQGRQIHAELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV-LLSNIYASAGKWTNV 694
               N V W S L+   K  ++     +AE++    P ++ V   L+   YA  G    V
Sbjct: 426 -ANKNVVAWTSFLSMYIKCGDLS----SAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKV 480

Query: 695 ARVRLQMKEQGIR 707
             +   MK +G +
Sbjct: 481 FELLSSMKAEGFQ 493



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 104/214 (48%), Gaps = 2/214 (0%)

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
           L +     EA++L  ++    + V+  T   V   C      +  K ++  +++ G+  D
Sbjct: 31  LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + L  +L++ +++  D   A QVFRRM  RDV  W++ I A A   +  +A + F  M  
Sbjct: 91  IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
             I+P+ I F+ +L AC++  ++ +G  +  ++    G+   +     ++ +  + G + 
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKI-HTIVKAMGMETDVAVATALITMYSKCGEIS 209

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            A ++   M  E N V W +++ A  +H+ ++ A
Sbjct: 210 VACEVFHKM-TERNVVSWTAIIQANAQHRKLNEA 242


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 303/707 (42%), Positives = 435/707 (61%), Gaps = 4/707 (0%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFD 197
           T P  L    KS A  +  Q+H   +  G   +  V   +I F    E GD+   R VFD
Sbjct: 20  TPPLSLIKTCKSMA--QLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFD 77

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
            M   N   W ++I   +R   P  AV ++ EM+E G+ P+  T   ++    +   ++ 
Sbjct: 78  TMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKC 137

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G  +  +I +LG  +N  + NAL+ +Y   G V  A+ +F      ++V  N ++S Y R
Sbjct: 138 GRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNR 197

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
                E++ + DEM      P  +T++S +SA ++L DL  G+  H YV    +E    +
Sbjct: 198 SKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVL 257

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N +IDMY  CG  + A  IFD+M ++ V+SW +++ G    G V  AR  F +MP RD 
Sbjct: 258 ENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDF 317

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           +SW  M+ G  Q N F+E + LFR M +  IK D  TMV + +AC +LGAL+L +WI AY
Sbjct: 318 VSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAY 377

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           I+KN I  D  +  AL+DM+  CG+ ++A+++F  M  RD  +WTA I  +A+ G GE+A
Sbjct: 378 IDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEA 437

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +++F++ML+  I PD +  +GVL AC+H G+V++G   F  MT  HG+ P + HYGCMVD
Sbjct: 438 LDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVD 497

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGRAG L EA ++IK+MPV+PN ++WGSLL AC+ H++ ++A  AA++I EL+PE   V
Sbjct: 498 LLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAV 557

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +VLL NIYA+  +W  +  VR  M ++GI+K PG S IE+NG VHEF +GD+ HP+   I
Sbjct: 558 YVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEI 617

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
            S L EM+  L+ AGY PD + V LD+ E+EK+  +  HSEKLA+AFGLIS+   + IR+
Sbjct: 618 YSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRI 677

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VKNLR+C DCH  AKLVSKVY+RE+IVRD  RFH FR GSCSC D+W
Sbjct: 678 VKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 182/608 (29%), Positives = 304/608 (50%), Gaps = 80/608 (13%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCA 75
           + TTL+       +   +P +  +K CK++ +LKQ H   +  GL   P   ++++  C 
Sbjct: 3   SATTLSPPPTHLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCC 62

Query: 76  --QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
             ++G  E   YA+  FD     N      F++N++I+GYS +G    A+S+Y E+   G
Sbjct: 63  KHELGDME---YARMVFDTMPGPNH-----FVWNNMIKGYSRVGCPNSAVSMYCEMLERG 114

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           ++PD++T+PF+L   T+ +A   G ++H  IVK+GF  +VFV+N LI+ Y   G++   R
Sbjct: 115 VMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVAR 174

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            VFD  S+ +VV+W  +I    R     E++ LF EM    + P+S+T+V V+SAC+KL+
Sbjct: 175 GVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLK 234

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +L +G RV  Y+ +L ++   ++ NAL+DMY  CG +DTA  +F   K R+++    I++
Sbjct: 235 DLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVT 294

Query: 314 NYVRL---GLAR----------------------------EALAILDEMLLHGPRPDRVT 342
            +  L   GLAR                            E L++  EM     +PD  T
Sbjct: 295 GFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFT 354

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M+S ++A A LG L  G     Y+ +N ++    + N +IDMY  CG  E A RIF+ M 
Sbjct: 355 MVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMP 414

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           ++  +SW ++I GL  NG  E                               EA+++F  
Sbjct: 415 HRDKISWTAVIFGLAINGYGE-------------------------------EALDMFSQ 443

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCG 521
           ML   I  D VT +GV  AC + G +D  K  +A +  ++GI  ++     +VD+  R G
Sbjct: 444 MLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAG 503

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS----IVF 576
             + A +V + M  K +   W + +GA  +  + E A     ++L   ++P++    ++ 
Sbjct: 504 HLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILE--LEPENGAVYVLL 561

Query: 577 VGVLTACS 584
             +  AC+
Sbjct: 562 CNIYAACN 569


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 331/846 (39%), Positives = 475/846 (56%), Gaps = 65/846 (7%)

Query: 7   PSPLVLATPTVTTLTNQHKAKT----TPKDSPSIGSLKN--CKTLNELKQPHCHILKQGL 60
           PSPL ++  +    TNQ+ + T      +  P++  ++      LNE +Q H H +K   
Sbjct: 13  PSPLPISIHSFQN-TNQYHSPTLKFTQSQPKPNVPHIQQELHINLNETQQLHGHFIKTS- 70

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
                        C       S      A + Y      S+   +++ LI  Y       
Sbjct: 71  -----------SNC-------SYRVPLAALESY------SSNAAIHSFLITSYIKNNCPA 106

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +A  +Y  + G     D F  P VL AC    +F  G +VHG +VK GF  DVFV N LI
Sbjct: 107 DAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALI 166

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
             Y E G +   R +FD++  ++VVSW+++I +  R  L  EA+ L  +M    +KP+ +
Sbjct: 167 MMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEI 226

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGM--KANALMVNALVDMYMKCGAVDTAKQLFG 298
            M+ +    A+L +L+LG  + AY+   G   K+   +  AL+DMY+KC  +  A+++F 
Sbjct: 227 GMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFD 286

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
                +++    +++ Y+      E + +  +ML  G  P+ +TMLS V      G L  
Sbjct: 287 GLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALEL 346

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G++ H + LRNG      +    IDMY KCG                             
Sbjct: 347 GKLLHAFTLRNGFTLSLVLATAFIDMYGKCG----------------------------- 377

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
             DV SAR VF     +D + W+ M+    Q N  +EA ++F  M    I+ +  TMV +
Sbjct: 378 --DVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSL 435

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
              C   G+L++ KWI++YI+K GI  DM L T+ VDM+A CGD   A ++F     RD+
Sbjct: 436 LMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDI 495

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
           S W A I   AM G+GE A+ELF EM   G+ P+ I F+G L ACSH GL+ +G  LF  
Sbjct: 496 SMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHK 555

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M    G +P++ HYGCMVDLLGRAGLL EA +LIKSMP+ PN  ++GS LAAC+ H+N+ 
Sbjct: 556 MVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIK 615

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +  +AA++   L+P KSG +VL+SNIYASA +W +VA +R  MK++GI K PG SSIEVN
Sbjct: 616 LGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVN 675

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           G +HEF  GD  HP+   +  M+ EM  +L DAGY PD++ VL ++D+++K   L++HSE
Sbjct: 676 GLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSE 735

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLAMA+GLIST+  +PIR+VKNLR+C DCH+  KL+SK+Y REIIVRD NRFH F++GSC
Sbjct: 736 KLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSC 795

Query: 839 SCSDFW 844
           SC D+W
Sbjct: 796 SCCDYW 801


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/744 (39%), Positives = 443/744 (59%), Gaps = 5/744 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           ++S+I  Y+      +A   +  +    I P++ TF  +L AC   S   +  ++H  + 
Sbjct: 147 WSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVK 206

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             G + DV V   LI  Y +CG+I     +F +M ERNVVSWT++I A A+     EA  
Sbjct: 207 ASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFE 266

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L+ +M++ GI PN+VT V ++++C   + L  G R+ ++I E G++ + ++ NAL+ MY 
Sbjct: 267 LYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYC 326

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR-----EALAILDEMLLHGPRPDR 340
           KC  +  A++ F     R+++  + +++ Y + G        E   +L+ M   G  P++
Sbjct: 327 KCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNK 386

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           VT +S + A +  G L  GR  H  + + G E   S+   + +MY KCG    A ++F  
Sbjct: 387 VTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSK 446

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M NK VV+W SL+   IK GD+ SA +VFSEM  R+ +SWN M+ G  Q     +  EL 
Sbjct: 447 MENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELL 506

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
             M  E  + DRVT++ +  ACG L AL+  K ++A   K G+  D  +AT+L+ M+++C
Sbjct: 507 SSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKC 566

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           G+   A  VF ++  RD  AW A +      G G +AV+LF  ML++ + P+ I F  V+
Sbjct: 567 GEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVI 626

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
           +AC   GLV +G  +FR M +   + P   HYGCMVDLLGRAG L EA + I+ MP EP+
Sbjct: 627 SACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPD 686

Query: 641 DVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQ 700
             +W +LL AC+ H NV +A +AA  I  L+P  + V+V LSNIYA AG+W +  +VR  
Sbjct: 687 ISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKV 746

Query: 701 MKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNV 760
           M ++G++K  G SSIE++G++H F + D +HPE+++I + L  +   +++AGY PD+  V
Sbjct: 747 MDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFV 806

Query: 761 LLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDR 820
           L DVDE +K+  L HHSEKLA+A+GL+ T    PIR++KNLR+C DCH+  K +SK+  R
Sbjct: 807 LHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKR 866

Query: 821 EIIVRDNNRFHFFRQGSCSCSDFW 844
           EI+ RD NRFH+F+ G+CSC DFW
Sbjct: 867 EIVARDANRFHYFKNGTCSCGDFW 890



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 238/521 (45%), Gaps = 45/521 (8%)

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           KEA+ L   + + G+  NS T  C+I  CAKL+  E G  V   +DELG+  +  + N+L
Sbjct: 60  KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           ++ Y K G V + +Q+F     R++V  +++++ Y       +A    + M      P+R
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           +T LS + A      L   R  H  V  +G+E   ++   +I MY KCG+  +AC IF  
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  + VVSW ++I                                   Q     EA EL+
Sbjct: 240 MKERNVVSWTAIIQ-------------------------------ANAQHRKLNEAFELY 268

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
             ML   I  + VT V + ++C    AL+  + I+++I + G+  D+ +A AL+ M+ +C
Sbjct: 269 EKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKC 328

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG-----NGEQAVELFNEMLRQGIKPDSIV 575
              Q A + F RM KRDV +W+A I   A  G     + ++  +L   M R+G+ P+ + 
Sbjct: 329 NCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVT 388

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F+ +L ACS  G + QG  +   ++ +   S + +    + ++  + G + EA  +   M
Sbjct: 389 FMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTA-IFNMYAKCGSIYEAEQVFSKM 447

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERI-TELDPEKSGVHVLLSNIYASAGKWTNV 694
               N V W SLL    K  ++     +AE++ +E+         L+   YA +G    V
Sbjct: 448 E-NKNVVAWASLLTMYIKCGDLT----SAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKV 502

Query: 695 ARVRLQMKEQGIR--KLPGSSSIEVNGKVHEFTSGDESHPE 733
             +   MK +G +  ++   S +E  G +     G   H E
Sbjct: 503 FELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAE 543



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 201/460 (43%), Gaps = 74/460 (16%)

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           + G  +EA+ +L  +   G   +  T    +   A+L     G+M H  +   GL     
Sbjct: 55  KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + N++I+ Y K G      ++F  M+ + VV+W+S+IA    N                 
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGN----------------- 157

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                         N   +A + F  M    I+ +R+T + +  AC     L+ A+ I+ 
Sbjct: 158 --------------NHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT 203

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            ++ +G+  D+ +ATAL+ M+++CG+   A ++F++M++R+V +WTA I A A      +
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV------ 610
           A EL+ +ML+ GI P+++ FV +L +C+    +N+G  +   +++  G+   +V      
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISE-RGLETDVVVANALI 322

Query: 611 -------------------------HYGCMVDLLGRAGL-----LGEALDLIKSMPVE-- 638
                                     +  M+    ++G      L E   L++ M  E  
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382

Query: 639 -PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS-GVHVLLSNIYASAGKWTNVAR 696
            PN V + S+L AC  H  ++        I+++  E    +   + N+YA  G      +
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQ 442

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
           V  +M+ + +  +  +S + +  K  + TS ++   EM+ 
Sbjct: 443 VFSKMENKNV--VAWASLLTMYIKCGDLTSAEKVFSEMST 480



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 110/223 (49%), Gaps = 2/223 (0%)

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
           L +    +EA++L  ++    + V+  T   +   C  L   +  K ++  +++ G+  D
Sbjct: 53  LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + L  +L++ +++ GD     QVFRRM  RDV  W++ I A A   +  +A + F  M  
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
             I+P+ I F+ +L AC++  ++ +   +  ++    G+   +     ++ +  + G + 
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREI-HTVVKASGMETDVAVATALITMYSKCGEIS 231

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            A ++ + M  E N V W +++ A  +H+ ++ A    E++ +
Sbjct: 232 LACEIFQKMK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ 273


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 308/806 (38%), Positives = 479/806 (59%), Gaps = 45/806 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+ C+ + +  Q    ++  G   K S+ +  +   +    F ++  + + F +    N 
Sbjct: 33  LQKCQNIKQFNQILSQMILSGF-FKDSFAASRLLKFSTELPFININQSYQIFSHIENPNG 91

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
                F+ N++++GY       +AI +Y  +    +  D +T+P +  +C+   A  +G 
Sbjct: 92  -----FICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGK 146

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +   ++K+GFD DV+++N LIN Y  CG++ D R+VFD  S  ++VSW S++       
Sbjct: 147 CIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSML------- 199

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
               A Y+    VEE                AK    ++ DR+         + N +  N
Sbjct: 200 ----AGYVLVGNVEE----------------AK----DVYDRMP--------ERNVIASN 227

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +++ ++ K G V+ A +LF E K ++LV  + ++S Y +  +  EAL +  EM  +G   
Sbjct: 228 SMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMV 287

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D V +LS +SA ++L  ++ G++ HG V++ G+E + ++ N +I MY  C +   A ++F
Sbjct: 288 DEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLF 347

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                   +SWNS+I+G +K G++E AR +F  MP +D++SW+ M+ G  Q++ F E + 
Sbjct: 348 SESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLV 407

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF+ M  E  K D   +V V SAC +L ALD  KWI+AYI KNG+  ++ L T L++M+ 
Sbjct: 408 LFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYM 467

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           + G  + A++VF+ +E++ VS W A I  +AM G  +++++ F+EM   G+ P+ I FV 
Sbjct: 468 KLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVA 527

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL AC H GLV++G   F SM   H + P I HYGCMVDLLGRAG+L EA +LI+SMP+ 
Sbjct: 528 VLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMA 587

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+   WG+LL AC+K+ + +       ++ EL P+  G +VLLSNIYAS G W +V  VR
Sbjct: 588 PDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVR 647

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
             M++ G+ K PG S IE +G+VHEF +GD++HP+  +I  ML EM  +L+  GY PD  
Sbjct: 648 GMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTR 707

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            V LD+DE+EK+  L  HSEKLA+AFGLI+     PIR+VKNLR+C DCH+ AKL+SK +
Sbjct: 708 EVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAF 767

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
           +REI+VRD +RFH F+QGSCSC D+W
Sbjct: 768 NREIVVRDRHRFHHFKQGSCSCMDYW 793


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 310/809 (38%), Positives = 468/809 (57%), Gaps = 42/809 (5%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L++C    +L   KQ H HIL+ G+      I+ ++      G   S+  A++ FD +  
Sbjct: 51  LQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCG---SVNEARRLFDKF-- 105

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
              ++ ++  +N +I GY+  GLG EA +L+  +   G+ PDKFTF  +L+AC+  +A  
Sbjct: 106 ---SNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALN 162

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G +VH  +++ G   +  V N LI+ Y +CG + D RRVFD M+ R+ VSWT+L  A A
Sbjct: 163 WGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 222

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                +E++  +  M++EG++P+ +T + V+SAC  L  LE G ++ A I E    ++  
Sbjct: 223 ESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVR 282

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  AL  MY+KCGAV  A+++F    +R+++  NT++   V  G   EA  +   ML   
Sbjct: 283 VSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKEC 342

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
             PDRVT L+ +SA A+ G L CG+  H   +++GL       N +I+MY K G      
Sbjct: 343 VAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAG------ 396

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                     ++ AR+VF  MP RD +SW  ++GG        E
Sbjct: 397 -------------------------SMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVE 431

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           +   F+ ML + ++ +++T + V  AC    AL   K I+A + K GI  D+ +A AL+ 
Sbjct: 432 SFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMS 491

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ +CG  + A++V   M  RDV  W   IG +A  G G +A++ F  M  + ++P++  
Sbjct: 492 MYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATT 551

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FV V++AC    LV +G   F SM   +G+ P   HY CMVD+L RAG LGEA D+I +M
Sbjct: 552 FVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTM 611

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P +P+  +WG+LLAAC+ H NV+I   AAE+  +L+P+ +G +V LS IYA+AG W +VA
Sbjct: 612 PFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVA 671

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           ++R  MKE+G++K PG S IEV G+VH F +GD+SHP    I S L  +  +++  GYVP
Sbjct: 672 KLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVP 731

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           D   V+ D+D++ K+  + HHSEKLA+A+GLIST    PIRV KNLR+C DCH+  K +S
Sbjct: 732 DTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFIS 791

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+  REII RD +RFH F+ G CSC D+W
Sbjct: 792 KITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 165/520 (31%), Positives = 263/520 (50%), Gaps = 49/520 (9%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D + +  +L +C K+     G QVH  I++ G   +V++ N L+  Y  CG + + RR+F
Sbjct: 43  DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           D+ S ++VVSW  +I   A R L +EA  LF  M +EG++P+  T V ++SAC+    L 
Sbjct: 103 DKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALN 162

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
            G  V   + E G+  NA + NAL+ MY KCG+V  A+++F     R+ V   T+   Y 
Sbjct: 163 WGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 222

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
             G A+E+L     ML  G RP R+T ++ +SA   L  L  G+  H  ++ +       
Sbjct: 223 ESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVR 282

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +   +  MY+KCG  + A  +F+ + N+ V++WN++I GL+ +G +              
Sbjct: 283 VSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQL-------------- 328

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                            EEA  +F  ML E +  DRVT + + SAC   G L   K I+A
Sbjct: 329 -----------------EEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHA 371

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
              K+G+  D++   AL++M+++ G  + A QVF RM KRDV +WTA +G  A  G   +
Sbjct: 372 RAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVE 431

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           +   F +ML+QG++ + I ++ VL ACS+   +  G        +IH    ++V  G   
Sbjct: 432 SFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWG-------KEIHA---EVVKAGIFA 481

Query: 617 DLLGRAGLL------GEALDLIK-SMPVEPNDVI-WGSLL 648
           DL     L+      G   D I+ S  +   DV+ W +L+
Sbjct: 482 DLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLI 521



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 219/419 (52%), Gaps = 37/419 (8%)

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           ++G + +S   V ++ +C K ++L +G +V  +I   GMK N  ++N L+ +Y+ CG+V+
Sbjct: 37  QKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN 96

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A++LF +  ++++V  N ++S Y   GL +EA  +   M   G  PD+ T +S +SA +
Sbjct: 97  EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS 156

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
               L  GR  H  V+  GL    ++ N +I MY KCG    A R+FD M+++  VSW  
Sbjct: 157 SPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW-- 214

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
                                         T+ G   +    +E+++ +  ML E ++  
Sbjct: 215 -----------------------------TTLTGAYAESGYAQESLKTYHAMLQEGVRPS 245

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           R+T + V SACG L AL+  K I+A I ++  H D++++TAL  M+ +CG  + A +VF 
Sbjct: 246 RITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFE 305

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            +  RDV AW   IG +   G  E+A  +F+ ML++ + PD + ++ +L+AC+  G +  
Sbjct: 306 CLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLAC 365

Query: 592 GWHLF-RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLL 648
           G  +  R++ D  G+   +     ++++  +AG + +A  +   MP    DV+ W +L+
Sbjct: 366 GKEIHARAVKD--GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP--KRDVVSWTALV 420



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 157/323 (48%), Gaps = 35/323 (10%)

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +L  +   G + D    +  + +  +  DL  G+  H ++LR G++    I NT++ +Y+
Sbjct: 31  VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
            CG    A R+FD  SNK+VVSWN +I+G    G                       LG 
Sbjct: 91  HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRG-----------------------LG- 126

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                  +EA  LF +M  E ++ D+ T V + SAC    AL+  + ++  + + G+  +
Sbjct: 127 -------QEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANN 179

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             +  AL+ M+A+CG  + A +VF  M  RD  +WT   GA A  G  +++++ ++ ML+
Sbjct: 180 ATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQ 239

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           +G++P  I ++ VL+AC     + +G  +   + +    S   V    +  +  + G + 
Sbjct: 240 EGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTA-LTKMYIKCGAVK 298

Query: 627 EALDLIKSMPVEPNDVI-WGSLL 648
           +A ++ + +P    DVI W +++
Sbjct: 299 DAREVFECLP--NRDVIAWNTMI 319


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/640 (44%), Positives = 417/640 (65%), Gaps = 2/640 (0%)

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W  +I +  +R+ P+ A+ ++ ++ +   + ++     V+ AC ++   +LG  +  ++ 
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           + G+  +  + NAL+ MY +C  V+ A+ +F +  +R++V  +T++ +  R      AL 
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT--MIDM 384
           ++ EM     RP  V M+S V+  A   ++  G+  H YV+RN       +  T  ++DM
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KCG   +A ++F+ ++ KTVVSW ++IAG I++  +E AR +F     RD + W  ML
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
               Q N  ++A  LF  M +  ++  +VT+V + S C   GALDL KW+++YI+K  + 
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            D  L TALVDM+A+CGD   A ++F     RD+  W A I   AM G GE+A+++F EM
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
            RQG+KP+ I F+G+L ACSH GLV +G  LF  M    G+ PQI HYGCMVDLLGRAGL
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 511

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA ++IKSMP++PN ++WG+L+AAC+ H+N  +   AA ++ E++PE  G +VL+SNI
Sbjct: 512 LDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNI 571

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YA+A +W++ A VR  MK  G++K PG S IEVNG VHEF  GD+SHP++  I+ ML EM
Sbjct: 572 YAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 631

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
             +L +AGYVPD + VLL++DE+EK+  L++HSEKLAMAFGLIST+ + PIR+VKNLR+C
Sbjct: 632 RRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVC 691

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH+  KL+SK+Y R IIVRD NRFH FR+G CSC D+W
Sbjct: 692 NDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 253/593 (42%), Gaps = 121/593 (20%)

Query: 3   LTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGH 62
           L  NP+PL                  TP  SPS   L    TL + KQ H HI+K    H
Sbjct: 34  LKFNPTPL-----------------QTPPTSPSQHDLS---TLEQTKQIHAHIIKTHFHH 73

Query: 63  KPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEA 122
                                   Q   + +      SA    +N +I  Y+       A
Sbjct: 74  A----------------------LQIPLNDFPSGLSPSAQ---WNFVITSYTKRNQPRNA 108

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           +++Y +L       D F  P VL AC + S    G ++HG ++K G DRDVFV N L+  
Sbjct: 109 LNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLM 168

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           YGEC  +   R VFD+M ER+VVSW+++I + +R      A+ L  EM    ++P+ V M
Sbjct: 169 YGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAM 228

Query: 243 VCVISACAKLQNLELGDRVCAYI------DELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           V +++  A   N+ +G  + AY+      + +G+        AL+DMY KCG +  A+QL
Sbjct: 229 VSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPT----TTALLDMYAKCGHLGLARQL 284

Query: 297 FG-------------------------------ECKDRNLVLCNTIMSNYVRLGLAREAL 325
           F                                  ++R++++   ++S Y +     +A 
Sbjct: 285 FNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAF 344

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDM 384
            + D+M   G RP +VT++S +S  A  G L  G+  H Y+ +  +E  D I NT ++DM
Sbjct: 345 NLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV-DCILNTALVDM 403

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KCG    A R+F    ++ +  WN++I G   +G  E A ++F+EM            
Sbjct: 404 YAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME----------- 452

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGI 503
                                + +K + +T +G+  AC + G +   K ++   +   G+
Sbjct: 453 --------------------RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL 492

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
              ++    +VD+  R G    A ++ + M  K +   W A + A  +  N +
Sbjct: 493 VPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 545


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 281/688 (40%), Positives = 427/688 (62%), Gaps = 2/688 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H   +KMG   D   +  +I F    E G ++  R+VFD + +  +  W ++I   +R
Sbjct: 25  QIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSR 84

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
            + P+  V ++  M+   IKP+  T   ++    +   L+ G  +  +  + G  +N  +
Sbjct: 85  INHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFV 144

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             A + M+  C  VD A+++F       +V  N ++S Y R+   +++  +  EM   G 
Sbjct: 145 QKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGV 204

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            P+ VT++  +SA ++L DL  G+  + Y+    +E    + N +IDM+  CG+ + A  
Sbjct: 205 SPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQS 264

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +FD+M N+ V+SW S++ G    G ++ AR+ F ++P RD++SW  M+ G  + N F EA
Sbjct: 265 VFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEA 324

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + LFR M    +K D  TMV + +AC +LGAL+L +W+  YI+KN I  D  +  AL+DM
Sbjct: 325 LALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDM 384

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CG+  +A +VF+ M  +D   WTA I  +A+ G+GE+A+ +F+ M+   I PD I +
Sbjct: 385 YFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITY 444

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVL AC+H G+V +G   F SMT  HG+ P + HYGCMVDLLGRAG L EA ++I +MP
Sbjct: 445 IGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMP 504

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           V+PN ++WGSLL AC+ H+NV +A  AA++I EL+PE   V+VLL NIYA+  +W N+ +
Sbjct: 505 VKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQ 564

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR  M E+GI+K PG S +E+NG V+EF +GD+SHP+   I + L  M   L  AGY PD
Sbjct: 565 VRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPD 624

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
            + V LD+ E++K+  L  HSEKLA+A+ LIS+   + IR+VKNLR+C DCH  AKLVS+
Sbjct: 625 TSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVSE 684

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            Y+RE+IVRD  RFH FR GSCSC++FW
Sbjct: 685 AYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 274/559 (49%), Gaps = 71/559 (12%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           +SP I  L+ CK++ +LKQ H H +K GL   P +  +V+  C    +   + YA++ FD
Sbjct: 8   ESP-ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHES-GKMIYARQVFD 65

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
                     TLF++N++I+GYS I      +S+Y+ +    I PD+FTFPF+L   T++
Sbjct: 66  AI-----PQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRN 120

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
            A   G  +    VK GFD ++FV+   I+ +  C  +   R+VFD      VV+W  ++
Sbjct: 121 MALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIML 180

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
               R    K++  LF EM + G+ PNSVT+V ++SAC+KL++LE G  +  YI+   ++
Sbjct: 181 SGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVE 240

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG---LAR------ 322
            N ++ N L+DM+  CG +D A+ +F   K+R+++   +I++ +  +G   LAR      
Sbjct: 241 RNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQI 300

Query: 323 ----------------------EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
                                 EALA+  EM +   +PD  TM+S ++A A LG L  G 
Sbjct: 301 PERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE 360

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
               Y+ +N ++    + N +IDMY KCG    A ++F  M +K   +W ++I GL  NG
Sbjct: 361 WVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAING 420

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
                                            EEA+ +F  M+   I  D +T +GV  
Sbjct: 421 HG-------------------------------EEALAMFSNMIEASITPDEITYIGVLC 449

Query: 481 ACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDV 538
           AC + G ++  +  +  +  ++GI  ++     +VD+  R G  + A +V   M  K + 
Sbjct: 450 ACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNS 509

Query: 539 SAWTAAIGAMAMEGNGEQA 557
             W + +GA  +  N + A
Sbjct: 510 IVWGSLLGACRVHKNVQLA 528


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 286/749 (38%), Positives = 444/749 (59%), Gaps = 32/749 (4%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           DN  +  L  + S+I G +  G   +A +L+  +   G+ PDK  F  +L AC    A  
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           +G +VH  + ++G+D +++V   +++ Y +CG + D   VFD +  RNVVSWT++I   A
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +     EA   F +M+E GI+PN VT + ++ AC+    L+ G ++  +I E G  ++  
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  AL+ MY KCG++  A ++F +   +N+V  N +++ YV+      ALA    +L  G
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+  T  S ++       L  G+  H  +++ GLE    + N ++ M++ CG      
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG------ 563

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                    D+ SA+ +F++MP RD +SWNT++ G  Q    + 
Sbjct: 564 -------------------------DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQV 598

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A + F++M    IK D++T  G+ +AC    AL   + ++A I +    CD+ + T L+ 
Sbjct: 599 AFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLIS 658

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ +CG  + A QVF ++ K++V +WT+ I   A  G G++A+ELF +M ++G+KPD I 
Sbjct: 659 MYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWIT 718

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FVG L+AC+H GL+ +G H F+SM + + + P++ HYGCMVDL GRAGLL EA++ I  M
Sbjct: 719 FVGALSACAHAGLIEEGLHHFQSMKEFN-IEPRMEHYGCMVDLFGRAGLLNEAVEFIIKM 777

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
            VEP+  +WG+LL ACQ H NV++A  AA++  ELDP  +GV V+LSNIYA+AG W  VA
Sbjct: 778 QVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVA 837

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           ++R  M ++G+ K PG S IEV+GKVH F S D++HP+   I + L  ++  +R  GYVP
Sbjct: 838 KMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVP 897

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           D   VL DV++ EK+  L +HSE+LA+ +GL+ T    PI + KNLR+C DCH+  K +S
Sbjct: 898 DTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFIS 957

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+  R+II RD+NRFH F+ G CSC DFW
Sbjct: 958 KITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 169/561 (30%), Positives = 282/561 (50%), Gaps = 33/561 (5%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D+     ++ +N L+ GY   GL  EA  L+ ++    + PDK TF  +LNAC  +  
Sbjct: 167 IFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
             +G +++  I+K G+D D+FV   LIN + +CGDI D  +VFD +  R++V+WTS+I  
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            AR    K+A  LF  M EEG++P+ V  V ++ AC   + LE G +V A + E+G    
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  A++ MY KCG+++ A ++F   K RN+V    +++ + + G   EA    ++M+ 
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  P+RVT +S + A +    L  G+    +++  G    D +   ++ MY KCG  + 
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A R+F+ +S + VV+WN++I   +                               Q   +
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYV-------------------------------QHEQY 495

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           + A+  F+ +L E IK +  T   + + C    +L+L KW++  I K G+  D+ ++ AL
Sbjct: 496 DNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNAL 555

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           V MF  CGD   A  +F  M KRD+ +W   I      G  + A + F  M   GIKPD 
Sbjct: 556 VSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDK 615

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I F G+L AC+    + +G  L   +T+       +V  G ++ +  + G + +A  +  
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTG-LISMYTKCGSIEDAHQVFH 674

Query: 634 SMPVEPNDVIWGSLLAACQKH 654
            +P + N   W S++A   +H
Sbjct: 675 KLP-KKNVYSWTSMIAGYAQH 694



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 274/571 (47%), Gaps = 47/571 (8%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           IKD + +      N+++   S  G   EA+ +   +    I   + T+  +L  C K   
Sbjct: 72  IKDTQKA------NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
            G+G +++  I K G   D+F+ N LIN Y +CG+ +  +++FD+M E++V SW  L+  
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             +  L +EA  L  +MV++ +KP+  T V +++ACA  +N++ G  +   I + G   +
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  AL++M++KCG +  A ++F     R+LV   ++++   R G  ++A  +   M  
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMYMKCGK 390
            G +PD+V  +S + A      L  G+  H    R    GWD+   +   ++ MY KCG 
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHA---RMKEVGWDTEIYVGTAILSMYTKCGS 362

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A  +FD +  + VVSW ++IAG  ++G +                            
Sbjct: 363 MEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI---------------------------- 394

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
              +EA   F  M+   I+ +RVT + +  AC    AL   + I  +I + G   D ++ 
Sbjct: 395 ---DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           TAL+ M+A+CG  + A +VF ++ K++V AW A I A       + A+  F  +L++GIK
Sbjct: 452 TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511

Query: 571 PDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           P+S  F  +L  C     +  G W  F  M    G+   +     +V +    G L  A 
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAK 569

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           +L   MP + + V W +++A   +H    +A
Sbjct: 570 NLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 286/749 (38%), Positives = 444/749 (59%), Gaps = 32/749 (4%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           DN  +  L  + S+I G +  G   +A +L+  +   G+ PDK  F  +L AC    A  
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           +G +VH  + ++G+D +++V   +++ Y +CG + D   VFD +  RNVVSWT++I   A
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +     EA   F +M+E GI+PN VT + ++ AC+    L+ G ++  +I E G  ++  
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  AL+ MY KCG++  A ++F +   +N+V  N +++ YV+      ALA    +L  G
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+  T  S ++       L  G+  H  +++ GLE    + N ++ M++ CG      
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG------ 563

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                    D+ SA+ +F++MP RD +SWNT++ G  Q    + 
Sbjct: 564 -------------------------DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQV 598

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A + F++M    IK D++T  G+ +AC    AL   + ++A I +    CD+ + T L+ 
Sbjct: 599 AFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLIS 658

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ +CG  + A QVF ++ K++V +WT+ I   A  G G++A+ELF +M ++G+KPD I 
Sbjct: 659 MYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWIT 718

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FVG L+AC+H GL+ +G H F+SM + + + P++ HYGCMVDL GRAGLL EA++ I  M
Sbjct: 719 FVGALSACAHAGLIEEGLHHFQSMKEFN-IEPRMEHYGCMVDLFGRAGLLNEAVEFIIKM 777

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
            VEP+  +WG+LL ACQ H NV++A  AA++  ELDP  +GV V+LSNIYA+AG W  VA
Sbjct: 778 QVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVA 837

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           ++R  M ++G+ K PG S IEV+GKVH F S D++HP+   I + L  ++  +R  GYVP
Sbjct: 838 KMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVP 897

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           D   VL DV++ EK+  L +HSE+LA+ +GL+ T    PI + KNLR+C DCH+  K +S
Sbjct: 898 DTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFIS 957

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+  R+II RD+NRFH F+ G CSC DFW
Sbjct: 958 KITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 168/561 (29%), Positives = 281/561 (50%), Gaps = 33/561 (5%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D+     ++ +N L+ GY   GL  EA  L+ ++    + PDK TF  +LNAC  +  
Sbjct: 167 IFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARN 226

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
             +G +++  I+K G+D D+FV   LIN + +CGDI D  +VFD +  R++V+WTS+I  
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            AR    K+A  LF  M EEG++P+ V  V ++ AC   + LE G +V A + E+G    
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  A++ MY KCG+++ A ++F   K RN+V    +++ + + G   EA    ++M+ 
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  P+RVT +S + A +    L  G+    +++  G    D +   ++ MY KCG  + 
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A R+F+ +S + VV+WN++I   +                               Q   +
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYV-------------------------------QHEQY 495

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           + A+  F+ +L E IK +  T   + + C    +L+L KW++  I K G+  D+ ++ AL
Sbjct: 496 DNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNAL 555

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           V MF  CGD   A  +F  M KRD+ +W   I      G  + A + F  M   GIKPD 
Sbjct: 556 VSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDK 615

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I F G+L AC+    + +G  L   +T+       +V  G ++ +  + G + +A  +  
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTG-LISMYTKCGSIEDAHQVFH 674

Query: 634 SMPVEPNDVIWGSLLAACQKH 654
            +P + N   W S++    +H
Sbjct: 675 KLP-KKNVYSWTSMITGYAQH 694



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 274/571 (47%), Gaps = 47/571 (8%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           IKD + +      N+++   S  G   EA+ +   +    I   + T+  +L  C K   
Sbjct: 72  IKDTQKA------NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
            G+G +++  I K G   D+F+ N LIN Y +CG+ +  +++FD+M E++V SW  L+  
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             +  L +EA  L  +MV++ +KP+  T V +++ACA  +N++ G  +   I + G   +
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  AL++M++KCG +  A ++F     R+LV   ++++   R G  ++A  +   M  
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMYMKCGK 390
            G +PD+V  +S + A      L  G+  H    R    GWD+   +   ++ MY KCG 
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHA---RMKEVGWDTEIYVGTAILSMYTKCGS 362

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A  +FD +  + VVSW ++IAG  ++G +                            
Sbjct: 363 MEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI---------------------------- 394

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
              +EA   F  M+   I+ +RVT + +  AC    AL   + I  +I + G   D ++ 
Sbjct: 395 ---DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           TAL+ M+A+CG  + A +VF ++ K++V AW A I A       + A+  F  +L++GIK
Sbjct: 452 TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511

Query: 571 PDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           P+S  F  +L  C     +  G W  F  M    G+   +     +V +    G L  A 
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAK 569

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           +L   MP + + V W +++A   +H    +A
Sbjct: 570 NLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/691 (41%), Positives = 433/691 (62%), Gaps = 5/691 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  +++ G   D F  + LI          +   ++VFD++   N+ +W +LI A A 
Sbjct: 53  QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112

Query: 217 RDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              P +++ +F  M+ +    P+  T   +I A ++L+ L  G      + ++ + ++  
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVF 172

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           ++N+L+  Y KCG +    ++F     R++V  N++++ +V+ G   EAL +  EM    
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN 232

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+ +TM+  +SA A+  D   GR  H Y+ RN +    ++ N M+DMY KCG  E A 
Sbjct: 233 VKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAK 292

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           R+FD M  K +VSW +++ G  K G+ ++A+ +F  MP +D  +WN ++    Q    +E
Sbjct: 293 RLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKE 352

Query: 456 AMELFR-VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           A+ELF  + LS+  K D VT+V   SAC  LGA+DL  WI+ YI+K G+  +  L T+L+
Sbjct: 353 ALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLI 412

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+ +CGD Q+A+ VF  +E++DV  W+A I  +AM G+G+ A+ LF++M    +KP+++
Sbjct: 413 DMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAV 472

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F  +L ACSH GLV +G   F  M  ++GV P + HY CMVD+LGRAGLL EA++LI+ 
Sbjct: 473 TFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEK 532

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+ P   +WG+LL AC  H+NV +A  A  ++ EL+P   G +VLLSNIYA AGKW  V
Sbjct: 533 MPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRV 592

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           + +R  M++ G++K PG SSIEV+G VHEF  GD SHP    I + L E+  RL   GYV
Sbjct: 593 SGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYV 652

Query: 755 PDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           P+ +++L  V+E++ K+  L  HSEKLA+AFGLIST ++ PIR+VKNLR+C DCHS AKL
Sbjct: 653 PNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKL 712

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VSK+YDREI++RD  RFH FR+G CSC D+W
Sbjct: 713 VSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 178/602 (29%), Positives = 294/602 (48%), Gaps = 81/602 (13%)

Query: 7   PSPLVLATPTVTTLTNQHKAKTTPKDS------PSIGSLKNCKTLNELKQPHCHILKQGL 60
           P+P +++ P   +L   +    T  +       P++  +  C    +LKQ H  +L+ GL
Sbjct: 4   PNPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGL 63

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
              P   S+++ T A +  F SL YAQ+ FD     N     L+ +N+LIR Y+      
Sbjct: 64  FFDPFSASRLI-TAAALSPFPSLDYAQQVFDQIPHPN-----LYTWNTLIRAYASSSNPH 117

Query: 121 EAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
           +++ +++  L      PDKFTFPF++ A ++      G   HG ++K+    DVF+ N L
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           I+FY +CG++  G RVF  +  R+VVSW S+I A  +   P+EA+ LF EM  + +KPN 
Sbjct: 178 IHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNG 237

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           +TMV V+SACAK  + E G  V +YI+   +  +  + NA++DMY KCG+V+ AK+LF +
Sbjct: 238 ITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDK 297

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEM--------------------------LL 333
             ++++V   T++  Y ++G    A  I D M                          L 
Sbjct: 298 MPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELF 357

Query: 334 H------GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           H        +PD VT++S +SA AQLG +  G   H Y+ + G++    +  ++IDMY K
Sbjct: 358 HELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCK 417

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  + A  +F  +  K V  W+++IAGL  +G             G+D           
Sbjct: 418 CGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGH------------GKD----------- 454

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCD 506
                   A+ LF  M  +++K + VT   +  AC ++G ++  +  +  +E   G+   
Sbjct: 455 --------AIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPG 506

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRD-VSAWTAAIGAMAMEGN---GEQAVELFN 562
           ++    +VD+  R G  + A+++  +M      S W A +GA  +  N    EQA     
Sbjct: 507 VKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLI 566

Query: 563 EM 564
           E+
Sbjct: 567 EL 568


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 292/717 (40%), Positives = 434/717 (60%), Gaps = 19/717 (2%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C K      G QVH  +V  G D   F+ + L+  Y + G + D RR+FD+MSERN
Sbjct: 16  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 75

Query: 204 VVSWTSLI-CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           V SWT+++   C   D  +E + LF+ MV EG++P+      V  AC++L+N  +G  V 
Sbjct: 76  VFSWTAIMEMYCGLGDY-EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 134

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
            Y+  +G + N+ +  +++DM++KCG +D A++ F E + +++ + N ++S Y   G  +
Sbjct: 135 DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFK 194

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS---ICN 379
           +AL +  +M+L G +P+ +T+ SAVSA   L  L  GR  HGY ++  +E  DS   + N
Sbjct: 195 KALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK--VEELDSDLLVGN 252

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA--GLIKNGDVESARE---------- 427
           +++D Y KC   E+A R F  +    +VSWN+++A  G  + GD ++A E          
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           VFSE+  RD + WN+++    Q      A++L R M    ++V+ VTMV    AC  L A
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L   K I+ +I + G+     +  +L+DM+ RCG  Q++ ++F  M +RD+ +W   I  
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
             M G G  AV LF +    G+KP+ I F  +L+ACSH GL+ +GW  F+ M   + + P
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 492

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
            +  Y CMVDLL RAG   E L+ I+ MP EPN  +WGSLL AC+ H N D+A YAA  +
Sbjct: 493 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 552

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
            EL+P+ SG +VL++NIY++AG+W + A++R  MKE+G+ K PG S IEV  K+H F  G
Sbjct: 553 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 612

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           D SHP M  IS+ +  +   +++ GYVPD   VL DVDE EK++ L  HSEK+A+AFGLI
Sbjct: 613 DTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLI 672

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ST+   P+R++KNLR+C DCHS  K +SKV  R+II+RDN RFH F  G CSC D+W
Sbjct: 673 STTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 269/586 (45%), Gaps = 100/586 (17%)

Query: 28  TTPKDSPSIGS--LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFES 82
           T P +   I +  L+ C+ L  L+   Q H  ++  G+       S+++    Q G  E 
Sbjct: 4   TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 63

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
              A++ FD   + N     +F + +++  Y  +G   E I L+  +   G+ PD F FP
Sbjct: 64  ---ARRMFDKMSERN-----VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFP 115

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            V  AC++   +  G  V+  ++ +GF+ +  V+  +++ + +CG +   RR F+E+  +
Sbjct: 116 KVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK 175

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV- 261
           +V  W  ++     +   K+A+ +F +MV EG+KPNS+T+   +SAC  L  L  G  + 
Sbjct: 176 DVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 235

Query: 262 --CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--------------------- 298
             C  ++EL   ++ L+ N+LVD Y KC +V+ A++ FG                     
Sbjct: 236 GYCIKVEEL--DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQ 293

Query: 299 ----------------------ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
                                 E   R++V+ N+I+S   + G +  AL +L EM L   
Sbjct: 294 YGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 353

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
             + VTM+SA+ A ++L  L  G+  H +++R GL+  + I N++IDMY +CG  + + R
Sbjct: 354 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 413

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENM 452
           IFD M  + +VSWN +I+    +G    A  +F +        +HI++  +L   +   +
Sbjct: 414 IFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGL 473

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            EE  + F++M +E                    A+D A   YA                
Sbjct: 474 IEEGWKYFKMMKTEY-------------------AMDPAVEQYA---------------C 499

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           +VD+ +R G     ++   +M  + + + W + +GA  +  N + A
Sbjct: 500 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLA 545


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 293/736 (39%), Positives = 438/736 (59%), Gaps = 31/736 (4%)

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           ++ G++ +G  +     + EL   G  PD +T PFV+ AC        G  +H  + K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            D D FV   L++ Y +C +I D R +FD+M ER++V+WT +I   A      E++ LF 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M EEG+ P+ V MV V+ ACAKL  +     +  YI     + + ++  A++DMY KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            V++A+++F   +++N++  + +++ Y   G  R+AL +   ML  G  PD++T+ S + 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A + L +L  GR+ H  V + GL+    +C  ++DMY KC                    
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR------------------- 281

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
                       ++E AR +F +MP RD ++W  M+GG  +     E++ LF  M  E +
Sbjct: 282 ------------EIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGV 329

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             D+V MV V  AC  LGA+  A+ I  YI++     D+ L TA++DM A+CG  + A +
Sbjct: 330 VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 389

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F RME+++V +W+A I A    G G +A++LF  MLR GI P+ I  V +L ACSH GL
Sbjct: 390 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 449

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V +G   F  M + + V   + HY C+VDLLGRAG L EAL LI+SM VE ++ +WG+ L
Sbjct: 450 VEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFL 509

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
            AC+ H++V +A  AA  + EL P+  G ++LLSNIYA+AG+W +VA+ R  M ++ ++K
Sbjct: 510 GACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKK 569

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
           +PG + IEV+ K H+F+ GD +HP    I  ML+ +  +L   GYVPD   VL DVDE+ 
Sbjct: 570 IPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEEL 629

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K  +L  HSEKLA+AFGLI+T +  PIR++KNLR+C DCH+F KLVS +  R IIVRD N
Sbjct: 630 KIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDAN 689

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F++G+CSC D+W
Sbjct: 690 RFHHFKEGACSCGDYW 705



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 235/471 (49%), Gaps = 46/471 (9%)

Query: 91  DYYIKDNETSATLFMYNSL-----------IRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           D Y+K  E     F+++ +           I GY+  G   E++ L+ ++   G++PDK 
Sbjct: 73  DMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKV 132

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
               V+ AC K  A  +   +   I +  F  DV +   +I+ Y +CG +   R +FD M
Sbjct: 133 AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRM 192

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
            E+NV+SW+++I A       ++A+ LF  M+  G+ P+ +T+  ++ AC+ L+NL++G 
Sbjct: 193 EEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGR 252

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            +   + + G+  +  +  ALVDMY KC  ++ A+ LF +  +R+LV    ++  Y   G
Sbjct: 253 LIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECG 312

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
            A E+L + D+M   G  PD+V M++ V A A+LG +   R    Y+ R   +  D I  
Sbjct: 313 NANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQ-LDVILG 371

Query: 380 T-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           T MIDM+ KCG  E A  IFD M  K V+SW+++IA    +G             GR   
Sbjct: 372 TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ------------GR--- 416

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                           +A++LF +ML   I  +++T+V +  AC + G ++     ++ +
Sbjct: 417 ----------------KALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLM 460

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
            E   +  D++  T +VD+  R G    A+++   M  ++D   W A +GA
Sbjct: 461 WEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 277/654 (42%), Positives = 417/654 (63%), Gaps = 3/654 (0%)

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKL 252
           +VFD++   N+ +W +LI A A    P + + +F +M+ E  + PNS T   VI A  ++
Sbjct: 85  KVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV 144

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            +L  G  +   + +    ++  + N+L+  Y   G +D+A  +F +  ++++V  N+++
Sbjct: 145 SSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMI 204

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           S +V+ G   EAL +   M +   RP+RVTM+  +SA A+  DL  GR    Y+ RNG++
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID 264

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + N M+DMY+KCG  E A R+FD M  K +VSW ++I G  K GD ++AR VF  M
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVM 324

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFR-VMLSERIKVDRVTMVGVASACGYLGALDLA 491
           P  D  +WN ++    Q    +EA+ +FR + L++  K + VT+    +AC  LGA+DL 
Sbjct: 325 PREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG 384

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
            WI+ YI+K GI  +  + T+L+DM+++CG  ++A++VF  +E+RDV  W+A I  +AM 
Sbjct: 385 GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMH 444

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G+G  A++LF++M    +KP+++ F  +L ACSH GLV++G   F  M  ++GV P   H
Sbjct: 445 GHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKH 504

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y CMVD+LGRAG L EA++LI+ MP+ P+  +WG+LL AC+ + NV++A  A  R+ E D
Sbjct: 505 YACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETD 564

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
               G +VLLSNIYA AGKW  V+R+R  MK  G+ K PG SSIEVNG +HEF  GD SH
Sbjct: 565 SNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSH 624

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTS 790
           P    I S L E+  R++  GYV D +++L  V+E+  K++ L+ HSEKLA+A+GLI   
Sbjct: 625 PLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRME 684

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            + PIR+VKNLR+C DCHS AKL+SK+Y+R+I++RD  RFH F  G+CSC D+W
Sbjct: 685 PSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 179/592 (30%), Positives = 296/592 (50%), Gaps = 74/592 (12%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           MA   NP   V  +   T LT  ++ K+ P   P +  +  C     LKQ H H+L+ GL
Sbjct: 1   MATLGNPLASVPISSNPTILTANNEQKSNPSTVPIL--IDKCANKKHLKQLHAHMLRTGL 58

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
              P   +K+   CA + +  SL YA K FD   + N     L+ +N+LIR ++     +
Sbjct: 59  FFDPPSATKLFTACA-LSSPSSLDYACKVFDQIPRPN-----LYTWNTLIRAFASSPKPI 112

Query: 121 EAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
           + + ++++ L      P+ +TFPFV+ A T+ S+   G  +HG ++K  F  D+F+ N L
Sbjct: 113 QGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSL 172

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           I+FY   GD+     VF ++ E+++VSW S+I    +   P+EA+ LF  M  E  +PN 
Sbjct: 173 IHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNR 232

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           VTMV V+SACAK  +LE G   C YI+  G+  N ++ NA++DMY+KCG+++ A++LF +
Sbjct: 233 VTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDK 292

Query: 300 CKDRNLV-------------------------------LCNTIMSNYVRLGLAREALAIL 328
            +++++V                                 N ++S+Y + G  +EALAI 
Sbjct: 293 MEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIF 352

Query: 329 DEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
            E+ L+   +P+ VT+ S ++A AQLG +  G   H Y+ + G++    I  ++IDMY K
Sbjct: 353 RELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSK 412

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  E A  +F  +  + V  W+++IAGL  +G   +A ++FS+M               
Sbjct: 413 CGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKM--------------- 457

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCD 506
            QE                ++K + VT   +  AC + G +D  +  +  +    G+   
Sbjct: 458 -QET---------------KVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPG 501

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
            +    +VD+  R G  + A+++  +M      S W A +GA  + GN E A
Sbjct: 502 SKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELA 553



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 138/322 (42%), Gaps = 48/322 (14%)

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCG-----KQEMACRIFDHMSNKTVVSWNSLIA 414
           +  H ++LR GL  +D    T   ++  C        + AC++FD +    + +WN+LI 
Sbjct: 47  KQLHAHMLRTGL-FFDPPSAT--KLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLI- 102

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                         F+  P         + G L    M  E         S+R   +  T
Sbjct: 103 ------------RAFASSP-------KPIQGLLVFIQMLHE---------SQRFP-NSYT 133

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              V  A   + +L   + I+  + K     D+ ++ +L+  ++  GD   A  VF ++ 
Sbjct: 134 FPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIV 193

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-W 593
           ++D+ +W + I      G+ E+A++LF  M  +  +P+ +  VGVL+AC+    +  G W
Sbjct: 194 EKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRW 253

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQ 652
                  + +G+   ++    M+D+  + G L +A  L   M  E  D++ W +++    
Sbjct: 254 AC--DYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKM--EEKDIVSWTTMIDGYA 309

Query: 653 KHQNVDIAAYAAERITELDPEK 674
           K  + D    AA R+ ++ P +
Sbjct: 310 KVGDYD----AARRVFDVMPRE 327


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 300/821 (36%), Positives = 464/821 (56%), Gaps = 71/821 (8%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D      ++ +N L+ GY       EA  L+ ++   G+ PDK+TF ++LNAC  +  
Sbjct: 161 IFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKN 220

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
             +G ++   I+  G+D D+FV   LIN + +CG + D  +VF+ +  R++++WTS+I  
Sbjct: 221 VDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITG 280

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            AR    K+A  LF  M EEG++P+ V  V ++ AC   + LE G RV A + E+G+   
Sbjct: 281 LARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE 340

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  AL+ MY KCG+++ A ++F   K RN+V    +++ + + G   EA    ++M+ 
Sbjct: 341 IYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE 400

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCH------GYV----LRNGLEGWDSIC----- 378
            G  P+RVT +S + A ++   L  GR  H      GY+    +R  L    + C     
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMD 460

Query: 379 ----------------NTMIDMYMKCGKQEMACRIFDHM-------SNKTVVS------- 408
                           N MI  Y++  K + A   F  +        + T  S       
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520

Query: 409 --------W-----------------NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
                   W                 N+L++  +  GD+ SA  +F++MP RD +SWNT+
Sbjct: 521 PDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTI 580

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G  Q    + A + F++M    +K D++T  G+ +AC    AL   + ++A I +  +
Sbjct: 581 IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAAL 640

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
            CD+ + T L+ M+ +CG    A  VF  + K++V +WT+ I   A  G G++A+ELF +
Sbjct: 641 DCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQ 700

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M ++G+KPD I FVG L+AC+H GL+ +G H F SM D + + P++ HYGCMVDL GRAG
Sbjct: 701 MQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFN-IEPRMEHYGCMVDLFGRAG 759

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
           LL EA++ I  M V+P+  +WG+LL ACQ H +V++A   A++  ELDP   GV+V+LSN
Sbjct: 760 LLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSN 819

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           IYA+AG W  V ++R  M ++G+ K PG S IEV+G+VH F S D++HP++  I + L  
Sbjct: 820 IYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGR 879

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           ++  ++  GYVPD   VL DV++ EK++ L HHSE+LA+A+GL+ T    PI + KNLR+
Sbjct: 880 LHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRV 939

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH+  KL+SK+  R+II RD+NRFH F+ G CSC DFW
Sbjct: 940 CGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 170/593 (28%), Positives = 286/593 (48%), Gaps = 64/593 (10%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIG-----------------------LG--------VE 121
           +IK ++    +FM+N LI  Y+  G                       LG         E
Sbjct: 129 HIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEE 188

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A  L+ ++   G+ PDK+TF ++LNAC  +    +G ++   I+  G+D D+FV   LIN
Sbjct: 189 AFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALIN 248

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            + +CG + D  +VF+ +  R++++WTS+I   AR    K+A  LF  M EEG++P+ V 
Sbjct: 249 MHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVA 308

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
            V ++ AC   + LE G RV A + E+G+     +  AL+ MY KCG+++ A ++F   K
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
            RN+V    +++ + + G   EA    ++M+  G  P+RVT +S + A ++   L  GR 
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H  +++ G    D +   ++ MY KCG    A  +F+ +S + VV+WN++I   +    
Sbjct: 429 IHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYV---- 484

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
                                      Q   ++ A+  F+ +L E IK D  T   + + 
Sbjct: 485 ---------------------------QHEKYDNAVATFQALLKEGIKPDSSTFTSILNV 517

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C    AL+L KW+ + I + G   D+ +  ALV MF  CGD   AM +F  M +RD+ +W
Sbjct: 518 CKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSW 577

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
              I      G  + A + F  M   G+KPD I F G+L AC+    + +G  L   +T+
Sbjct: 578 NTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITE 637

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
                  +V  G ++ +  + G + +A  +  ++P + N   W S++    +H
Sbjct: 638 AALDCDVVVGTG-LISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQH 688



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 262/549 (47%), Gaps = 35/549 (6%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           N+ +   S  G   EA+ + + +    I   + T+  +L  C K    G+G ++H  I  
Sbjct: 73  NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
                D+F+ N LI+ Y +CG+    +++FDEM +++V SW  L+    +    +EA  L
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
             +MV++G+KP+  T V +++ACA  +N++ G  + + I   G   +  +  AL++M++K
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           CG VD A ++F     R+L+   ++++   R    ++A  +   M   G +PD+V  +S 
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           + A      L  G+  H  +   GL+    +   ++ MY KCG  E A  +F+ +  + V
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           VSW ++IAG  ++G +                               EEA   F  M+  
Sbjct: 373 VSWTAMIAGFAQHGRM-------------------------------EEAFLFFNKMIES 401

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            I+ +RVT + +  AC    AL   + I+  I K G   D ++ TAL+ M+A+CG    A
Sbjct: 402 GIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDA 461

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
             VF R+ K++V AW A I A       + AV  F  +L++GIKPDS  F  +L  C   
Sbjct: 462 RNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSP 521

Query: 587 GLVNQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
             +  G W   +S+    G    +     +V +    G L  A++L   MP E + V W 
Sbjct: 522 DALELGKW--VQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWN 578

Query: 646 SLLAACQKH 654
           +++A   +H
Sbjct: 579 TIIAGFVQH 587



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 261/552 (47%), Gaps = 43/552 (7%)

Query: 30  PKDSPSIGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P     +  LK C   + L + K+ H  + + GL  +    + ++    + G+ E    A
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMED---A 360

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
            + F+     N  S T     ++I G++  G   EA   + ++   GI P++ TF  +L 
Sbjct: 361 LEVFNLVKGRNVVSWT-----AMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILG 415

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           AC++ SA  +G Q+H  I+K G+  D  V   L++ Y +CG ++D R VF+ +S++NVV+
Sbjct: 416 ACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVA 475

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W ++I A  + +    AV  F  +++EGIKP+S T   +++ C     LELG  V + I 
Sbjct: 476 WNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLII 535

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
             G +++  + NALV M++ CG + +A  LF +  +R+LV  NTI++ +V+ G  + A  
Sbjct: 536 RAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFD 595

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
               M   G +PD++T    ++A A    L  GR  H  +    L+    +   +I MY 
Sbjct: 596 YFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYT 655

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG  + A  +F ++  K V SW S+I G  ++G  + A E+F +M              
Sbjct: 656 KCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQ------------- 702

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                              E +K D +T VG  SAC + G +      +  ++   I   
Sbjct: 703 ------------------QEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPR 744

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           M+    +VD+F R G    A++   +M+ K D   W A +GA  +  + E A ++  + L
Sbjct: 745 MEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKL 804

Query: 566 RQGIKPDSIVFV 577
                 D +  +
Sbjct: 805 ELDPNDDGVYVI 816



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 159/350 (45%), Gaps = 40/350 (11%)

Query: 396 RIFDHMS----NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           RI +H+        +  WN LI+   K G+  SA+++F EMP +D  SWN +LGG  Q  
Sbjct: 125 RIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHR 184

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
            +EEA  L   M+ + +K D+ T V + +AC     +D    +++ I   G   D+ + T
Sbjct: 185 RYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGT 244

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL++M  +CG    A++VF  + +RD+  WT+ I  +A     +QA  LF  M  +G++P
Sbjct: 245 ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQP 304

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI---------------------- 609
           D + FV +L AC+H   + QG  +   M ++ G+  +I                      
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEV-GLDTEIYVGTALLSMYTKCGSMEDALEV 363

Query: 610 ---------VHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNV 657
                    V +  M+    + G + EA      M    +EPN V + S+L AC +   +
Sbjct: 364 FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSAL 423

Query: 658 DIAAYAAERITELDP-EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
                  +RI +        V   L ++YA  G   +   V  ++ +Q +
Sbjct: 424 KQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNV 473


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/703 (41%), Positives = 434/703 (61%), Gaps = 12/703 (1%)

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG--DIVD-GRRVFDEMSERNVVSWTS 209
           +F +G+Q+H   +  G    +F  + LI+F+   G  D +D  R +F ++   N+  W +
Sbjct: 21  SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNT 80

Query: 210 LICACARRDLPKEAVYLFFEMVEEGI-KPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           +I   +R D P+EA+ L+  M+ +GI  PN+ T   ++++CA+L +LE G  V ++I + 
Sbjct: 81  MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 140

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G +++  + NAL+ +Y   G ++ A+ LF E   R+LV  NT++  Y  +     AL + 
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 200

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMY 385
            EM   G  PD  T ++  S  + L +   G+  H  V +N L   DS   + + ++DMY
Sbjct: 201 GEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKN-LRSIDSNILLKSAIVDMY 259

Query: 386 MKCGKQEMACRIFDHM-SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
            KCG   +A R+F  M ++K+  +W+S++ G  + G++  AR++F+ M  RD ISW  M+
Sbjct: 260 AKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMI 319

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGI 503
            G +Q     EA+ELF+ M +  IK D VT+V V SAC  LGA DL K +Y  YIE    
Sbjct: 320 SGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVF 379

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEK--RDVSAWTAAIGAMAMEGNGEQAVELF 561
           + +  L  A++DM+A+CG    A+++FRR+ K  +    + + I  +A  G GE A+ +F
Sbjct: 380 NQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVF 439

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
            E++  G+KPD + FVGVL AC H GL+ +G  LF SM + +G+ PQ+ HYGCMVDLLGR
Sbjct: 440 RELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGR 499

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
            G L EA DL++ MP E N VIW +LL+AC+ H NV I   A +++ E++ +    +VLL
Sbjct: 500 YGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLL 559

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNI A A +W    +VR  M++ GIRK PG S IE+ G +H F + D+SHP+   I  ML
Sbjct: 560 SNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELML 619

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
           ++M  RL+ AGYVP+   V+ D+DE+EK+ ++S+HSEKLA+AFGL+  S T  IR+VKNL
Sbjct: 620 KDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNL 679

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH   KLVS++Y REI VRD  RFH FR GSCSC DFW
Sbjct: 680 RICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 176/580 (30%), Positives = 284/580 (48%), Gaps = 79/580 (13%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           ++  S+  L++CK+  +  Q H   +  GL H+   IS+++   + +G+ + L +++  F
Sbjct: 8   ENPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLF 67

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP-DKFTFPFVLNACT 149
                 N     LFM+N++IRGYS      EAI LY+ +   GI P + FTFPF+LN+C 
Sbjct: 68  SQIDCPN-----LFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCA 122

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
           + S+   G +VH  I+K GF+ D+FV N LI+ Y   G++   R +FDE   R++VS+ +
Sbjct: 123 RLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNT 182

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA--YIDE 267
           +I   A  + P+ A+ LF EM   GI P+  T V + S C+ L    +G ++ A  Y + 
Sbjct: 183 MIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNL 242

Query: 268 LGMKANALMVNALVDMYMK--------------------------------CGAVDTAKQ 295
             + +N L+ +A+VDMY K                                CG ++ A++
Sbjct: 243 RSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARK 302

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           LF    +R+++    ++S Y + G   EAL +  EM   G +PD VT+++ +SA A+LG 
Sbjct: 303 LFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGA 362

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMI-DMYMKCGKQEMACRIFDHMSN--KTVVSWNSL 412
              G+  +   + NG+   ++I    + DMY KCG  + A  IF  +    KT   +NS+
Sbjct: 363 FDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSM 422

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           IAGL ++G                       LG        E A+ +FR ++S  +K D 
Sbjct: 423 IAGLAQHG-----------------------LG--------ETAITVFRELISTGLKPDE 451

Query: 473 VTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           VT VGV  ACG+ G ++  K ++ +     GI   M+    +VD+  R G  + A  + +
Sbjct: 452 VTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQ 511

Query: 532 RMEKRDVSA-WTAAIGAMAMEGN---GEQAVELFNEMLRQ 567
           +M     S  W A + A    GN   GE A +   EM  Q
Sbjct: 512 KMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQ 551


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 275/692 (39%), Positives = 431/692 (62%), Gaps = 6/692 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCL--INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q H  +++ G   D +  + L  I        +   R+VFDE+ + N  +W +LI A A 
Sbjct: 49  QTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYAS 108

Query: 217 RDLPKEAVYLFFEMV--EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
              P  +++ F +MV  E    PN  T   +I A A++ +L LG  +     +  + ++ 
Sbjct: 109 GPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDV 168

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + N+L+  Y  CG +D+A ++F   K++++V  N++++ +V+ G   +AL +  +M   
Sbjct: 169 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 228

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
             +   VTM+  +SA A++ DL  GR    Y+  N +    ++ N M+DMY KCG  E A
Sbjct: 229 DVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 288

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            R+FD M  K  V+W +++ G   + D E+AREV + MP +D ++WN ++    Q     
Sbjct: 289 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPN 348

Query: 455 EAMELFR-VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           EA+ +F  + L + IK++++T+V   SAC  +GAL+L +WI++YI+KNGI  +  + +AL
Sbjct: 349 EALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSAL 408

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           + M+++CGD ++A +VF  +EKRDV  W+A IG +AM G G +AV++F +M    +KP+ 
Sbjct: 409 IHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNG 468

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           + F  V  ACSH GLV++   LF  M   +G+ P+  HY C+VD+LGR+G L +A+  I+
Sbjct: 469 VTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIE 528

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           +MP+ P+  +WG+LL AC+ H N+ +A  A  R+ EL+P   G HVLLSNIYA +GKW N
Sbjct: 529 AMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDN 588

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           V+ +R  M+  G++K PG SSIE++G +HEF SGD +HP    +   L E+  +L+  GY
Sbjct: 589 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 648

Query: 754 VPDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
            P++++VL  ++E+E K+  L+ HSEKLA+ +GLIST     IRV+KNLR+C DCH+ AK
Sbjct: 649 EPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAK 708

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L+S++Y+REIIVRD  RFH FR G CSC+DFW
Sbjct: 709 LISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 180/590 (30%), Positives = 294/590 (49%), Gaps = 76/590 (12%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDS-PSIGSLKNCKTLNELKQPHCHILKQG 59
           MA+     PL L  P     +N ++  T  + S  +I  +  C +L +LKQ H H+++ G
Sbjct: 1   MAIFSTAQPLSL--PRHPNFSNPNQPTTNNERSRHTISLIDRCSSLRQLKQTHAHMIRTG 58

Query: 60  LGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLG 119
           +   P   SK+    A + +F SL YA+K FD   + N      F +N+LIR Y+     
Sbjct: 59  MFSDPYSASKLFAIAA-LSSFASLEYARKVFDEIPQPNS-----FTWNTLIRAYASGPDP 112

Query: 120 VEAISLYVELAGF--GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
           V +I  ++++        P+K+TFPF++ A  + S+   G  +HG  +K     DVFV N
Sbjct: 113 VCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVAN 172

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
            LI+ Y  CGD+    +VF  + E++VVSW S+I    ++  P +A+ LF +M  E +K 
Sbjct: 173 SLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA 232

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           + VTMV V+SACAK+++LE G RVC+YI+E  +  N  + NA++DMY KCG+++ AK+LF
Sbjct: 233 SHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLF 292

Query: 298 G--ECKD-----------------------------RNLVLCNTIMSNYVRLGLAREALA 326
              E KD                             +++V  N ++S Y + G   EAL 
Sbjct: 293 DAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALL 352

Query: 327 ILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
           +  E+ L    + +++T++S +SA AQ+G L  GR  H Y+ +NG++    + + +I MY
Sbjct: 353 VFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMY 412

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            KCG  E A  +F+ +  + V  W+++I                               G
Sbjct: 413 SKCGDLEKAREVFNSVEKRDVFVWSAMI-------------------------------G 441

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIH 504
           GL       EA+++F  M    +K + VT   V  AC + G +D A+ ++  +E + GI 
Sbjct: 442 GLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIV 501

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            + +    +VD+  R G  ++A++    M      S W A +GA  +  N
Sbjct: 502 PEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 551


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 273/691 (39%), Positives = 430/691 (62%), Gaps = 5/691 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q HG +++ G   D +  + L           +   R+VFDE+ + N  +W +LI A A 
Sbjct: 48  QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107

Query: 217 RDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              P  +++ F +MV E    PN  T   +I A A++ +L LG  +     +  + ++  
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + N+L+  Y  CG +D+A ++F   K++++V  N++++ +V+ G   +AL +  +M    
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +   VTM+  +SA A++ +L  GR    Y+  N +    ++ N M+DMY KCG  E A 
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           R+FD M  K  V+W +++ G   + D E+AREV + MP +D ++WN ++    Q     E
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347

Query: 456 AMELFR-VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           A+ +F  + L + +K++++T+V   SAC  +GAL+L +WI++YI+K+GI  +  + +AL+
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            M+++CGD +++ +VF  +EKRDV  W+A IG +AM G G +AV++F +M    +KP+ +
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F  V  ACSH GLV++   LF  M   +G+ P+  HY C+VD+LGR+G L +A+  I++
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+ P+  +WG+LL AC+ H N+++A  A  R+ EL+P   G HVLLSNIYA  GKW NV
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           + +R  M+  G++K PG SSIE++G +HEF SGD +HP    +   L E+  +L+  GY 
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647

Query: 755 PDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           P+++ VL  ++E+E K+  L+ HSEKLA+ +GLIST     IRV+KNLR+C DCHS AKL
Sbjct: 648 PEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKL 707

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +S++YDREIIVRD  RFH FR G CSC+DFW
Sbjct: 708 ISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 181/588 (30%), Positives = 292/588 (49%), Gaps = 74/588 (12%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           MA+     PL L  P     +N ++  T  + S  I  ++ C +L +LKQ H H+++ G 
Sbjct: 1   MAIFSTAQPLSL--PRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGT 58

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
              P   SK+    A + +F SL YA+K FD   K N      F +N+LIR Y+     V
Sbjct: 59  FSDPYSASKLFAMAA-LSSFASLEYARKVFDEIPKPNS-----FAWNTLIRAYASGPDPV 112

Query: 121 EAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
            +I  ++++       P+K+TFPF++ A  + S+   G  +HG  VK     DVFV N L
Sbjct: 113 LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSL 172

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           I+ Y  CGD+    +VF  + E++VVSW S+I    ++  P +A+ LF +M  E +K + 
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG- 298
           VTMV V+SACAK++NLE G +VC+YI+E  +  N  + NA++DMY KCG+++ AK+LF  
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292

Query: 299 -ECKD-----------------------------RNLVLCNTIMSNYVRLGLAREALAIL 328
            E KD                             +++V  N ++S Y + G   EAL + 
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352

Query: 329 DEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
            E+ L    + +++T++S +SA AQ+G L  GR  H Y+ ++G+     + + +I MY K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  E +  +F+ +  + V  W+++I                               GGL
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMI-------------------------------GGL 441

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCD 506
                  EA+++F  M    +K + VT   V  AC + G +D A+ ++  +E N GI  +
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            +    +VD+  R G  ++A++    M      S W A +GA  +  N
Sbjct: 502 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 286/700 (40%), Positives = 427/700 (61%), Gaps = 35/700 (5%)

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG--ECGDIVDGRRVFDEMSERNVVS 206
           T  ++  +  Q H  +++     +    + LI+F      GD+   R++F +M   +   
Sbjct: 19  THCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFI 78

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
             ++I   AR   P EAV L++ MVE G+  ++ T   V++ACA+L  ++LG R    + 
Sbjct: 79  CNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVL 138

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           + G  ++  ++NAL+  Y  CG+   A  +F E   R++V  N +++ ++  GL+ +A  
Sbjct: 139 KNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198

Query: 327 ILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
           +LDEM  L   RPD VTM+S V A AQLG+L  G+  H Y    GL+    + N ++DMY
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMY 258

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            KC                                D+ESA+EVF+ +  +D +SW +ML 
Sbjct: 259 CKCD-------------------------------DIESAQEVFNRIREKDVLSWTSMLS 287

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
           GL +   F+EA+ LF+ M   +I++D +T+VGV SAC   GALD  K+I+  I+K  I+C
Sbjct: 288 GLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINC 347

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D+ L TALVDM+A+CG    A+QVFRRM  R+V  W A IG +AM G+GE A+ LF++M 
Sbjct: 348 DLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQME 407

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
              + PD + F+ +L ACSH GLV++G  +F++M +   + P++ HYGC+VDLL RA  +
Sbjct: 408 HDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKV 467

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
            +AL  I++MP++ N V+W +LL AC+   + D+A     R+ EL+P+  G +V+LSN+Y
Sbjct: 468 DDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLY 527

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
           A   +W +  ++R QMK +GI K PG S IE+NG +H+F +GD SH +   I +M+ EM 
Sbjct: 528 AGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMT 587

Query: 746 CRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
            R+  D G+VP   NVL D++E+EK++ L  HSEKLA+A GLIST    PIR+VKNLR+C
Sbjct: 588 RRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVC 647

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCHSF K+ SKVY+REI+ RD +RFH F++GSCSC DFW
Sbjct: 648 NDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 162/543 (29%), Positives = 275/543 (50%), Gaps = 43/543 (7%)

Query: 35  SIGSLK-NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           S+  LK +C ++++ KQ H  +L+  L H P + SK++   A +     L YA+K F   
Sbjct: 13  SVDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLA-LSHSGDLNYARKLFT-- 69

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
                 +   F+ N++IRGY+      EA+SLY  +   G+  D +T+PFVL AC +  A
Sbjct: 70  ---QMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGA 126

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G + H  ++K GF  D+FV N LI FY  CG       VFDE + R+VV+W  +I A
Sbjct: 127 VKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINA 186

Query: 214 CARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
              + L ++A  L  EM + + ++P+ VTMV ++ ACA+L NLE G  + +Y  ELG+  
Sbjct: 187 HLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDE 246

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N  + NA++DMY KC  +++A+++F   ++++++   +++S   + G  +EALA+  +M 
Sbjct: 247 NLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQ 306

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           L+    D +T++  +SA AQ G L  G+  H  + +  +     +   ++DMY KCG  +
Sbjct: 307 LNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSID 366

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +A ++F  M  + V +WN+LI GL  +G                                
Sbjct: 367 LALQVFRRMRVRNVFTWNALIGGLAMHGHG------------------------------ 396

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLAT 511
            E+A+ LF  M  +++  D VT + +  AC + G +D    ++ A   K  I   M+   
Sbjct: 397 -EDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYG 455

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            +VD+  R      A+     M  K +   W   +GA    G+ + A ++   ++   ++
Sbjct: 456 CVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIE--LE 513

Query: 571 PDS 573
           PDS
Sbjct: 514 PDS 516


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 294/813 (36%), Positives = 459/813 (56%), Gaps = 40/813 (4%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           + P+   L+ C +L EL+Q    + K GL  +  + +K+V    + G+ +      +  D
Sbjct: 37  EHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
                   S    +Y+++++G++ +    +A+  +V +    + P  + F ++L  C   
Sbjct: 97  --------SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 148

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
           +    G ++HG +VK GF  D+F    L N Y +C  + + R+VFD M ER++VSW +++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
              ++  + + A+ +   M EE +KP+ +T+V V+ A + L+ + +G  +  Y    G  
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           +   +  ALVDMY KCG+++TA+QLF    +RN+V  N+++  YV+    +EA+ I  +M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
           L  G +P  V+++ A+ A A LGDL  GR  H   +  GL+   S+ N++I MY KC   
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK-- 386

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
                                        +V++A  +F ++  R  +SWN M+ G  Q  
Sbjct: 387 -----------------------------EVDTAASMFGKLQSRTLVSWNAMILGFAQNG 417

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              +A+  F  M S  +K D  T V V +A   L     AKWI+  + ++ +  ++ + T
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           ALVDM+A+CG    A  +F  M +R V+ W A I      G G+ A+ELF EM +  IKP
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           + + F+ V++ACSH GLV  G   F  M + + +   + HYG MVDLLGRAG L EA D 
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 597

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I  MPV+P   ++G++L ACQ H+NV+ A  AAER+ EL+P+  G HVLL+NIY +A  W
Sbjct: 598 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 657

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             V +VR+ M  QG+RK PG S +E+  +VH F SG  +HP+   I + L ++ C +++A
Sbjct: 658 EKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA 717

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           GYVPD TN++L V+   K+ LLS HSEKLA++FGL++T+    I V KNLR+C DCH+  
Sbjct: 718 GYVPD-TNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNAT 776

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K +S V  REI+VRD  RFH F+ G+CSC D+W
Sbjct: 777 KYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 296/826 (35%), Positives = 477/826 (57%), Gaps = 40/826 (4%)

Query: 19  TLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMG 78
           TL+ +    +     P+   L+ C ++ EL Q    ++K GL ++  + +K+V   ++ G
Sbjct: 36  TLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYG 95

Query: 79  TFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
              S+  A + F+    D++  A   +Y+++++GY+       A++    +    + P  
Sbjct: 96  ---SINEAARVFEPI--DDKLDA---LYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV 147

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           + F ++L  C  ++    G ++HG ++   F  +VF    ++N Y +C  I D  ++FD 
Sbjct: 148 YNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDR 207

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M ER++VSW ++I   ++    K+A+ L   M +EG +P+S+T+V V+ A A +  L +G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             +  Y    G      +  AL DMY KCG+V+TA+ +F     + +V  N++M  YV+ 
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G   +A+A+ ++ML  G  P  VT++ A+ A A LGDL  G+  H +V +  L    S+ 
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N++I MY KC + ++A  IF++++ +T VSWN++I G  +NG V  A   FSEM      
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKS---- 443

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                LG                      +K D  TMV V  A   L     AKWI+  I
Sbjct: 444 -----LG----------------------MKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            ++ +  ++ + TALVDM+++CG    A ++F  +  R V  W A I      G G  A+
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           +LF++M +  ++P+ I ++ V++ACSH GLV++G   F+SM   +G+ P + HYG MVDL
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAG + EA D I++MP+ P   ++G++L AC+ H+N+++   AA+++ EL+P++ G H
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYH 656

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLL+NIYAS  KW+ VA VR  M+++G++K PG S +E+  +VH F SG  +HP+   I 
Sbjct: 657 VLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIY 716

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
           + L E+   ++ AGYVPD TN++LDV++  ++ LL+ HSEKLA+AFGL++TS    I V 
Sbjct: 717 AFLEELVYEIKAAGYVPD-TNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVR 775

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH+  K +S V  REIIVRD  RFH F+ G CSC D+W
Sbjct: 776 KNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 283/749 (37%), Positives = 437/749 (58%), Gaps = 31/749 (4%)

Query: 96   DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            D   + ++  +  +I GY+  G    A  ++ ++   G++P++ T+  VLNA +  +A  
Sbjct: 303  DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 156  EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
             G  VH  I+  G + D+ V   L+  Y +CG   D R+VF+++  R++++W ++I   A
Sbjct: 363  WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422

Query: 216  RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                 +EA  ++ +M  EG+ PN +T V +++AC     L  G  + + + + G   +  
Sbjct: 423  EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482

Query: 276  MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
            + NAL+ MY +CG++  A+ LF +   ++++    ++    + GL  EALA+  +M   G
Sbjct: 483  VQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG 542

Query: 336  PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
             +P+RVT  S ++A +    L  GR  H  V+  GL     + NT+++MY  CG      
Sbjct: 543  LKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCG------ 596

Query: 396  RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                      V+ AR+VF  M  RD +++N M+GG    N+ +E
Sbjct: 597  -------------------------SVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKE 631

Query: 456  AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
            A++LF  +  E +K D+VT + + +AC   G+L+ AK I++ + K+G   D  L  ALV 
Sbjct: 632  ALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVS 691

Query: 516  MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
             +A+CG    A+ VF +M KR+V +W A IG  A  G G+  ++LF  M  +GIKPD + 
Sbjct: 692  TYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVT 751

Query: 576  FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
            FV +L+ACSH GL+ +G   F SM+   G++P I HYGCMVDLLGRAG L E   LIK+M
Sbjct: 752  FVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTM 811

Query: 636  PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
            P + N  IWG+LL AC+ H NV +A  AAE   +LDP+ + V+V LS++YA+AG W + A
Sbjct: 812  PFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAA 871

Query: 696  RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
            ++R  M+++G+ K PG S IEV  K+H F + D SHPE   I + L ++   ++  GYVP
Sbjct: 872  KLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVP 931

Query: 756  DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
            D  +V+ DVDE EK+  + HHSE+LA+A+GLIST    PIR+ KNLR+C DCH+  K ++
Sbjct: 932  DTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFIT 991

Query: 816  KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K+ DREI+ RD NRFH F+ G CSC D+W
Sbjct: 992  KIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 176/619 (28%), Positives = 307/619 (49%), Gaps = 42/619 (6%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  + +L   ++ H HI++         ++ ++    Q G+ E      +A   + K
Sbjct: 148 LKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIE------EARQVWNK 201

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            N T  T+  +N+++ GY   G   EA+ L  E+   G+   + T   +L++C   SA  
Sbjct: 202 LNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALE 261

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G ++H   +K     DV V NC++N Y +CG I + R VFD+M  ++VVSWT +I   A
Sbjct: 262 CGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYA 321

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                + A  +F +M +EG+ PN +T + V++A +    L+ G  V ++I   G +++  
Sbjct: 322 DCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLA 381

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  ALV MY KCG+    +Q+F +  +R+L+  NT++      G   EA  I  +M   G
Sbjct: 382 VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREG 441

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
             P+++T +  ++A      L  GR  H  V+++G     S+ N +I MY +CG  + A 
Sbjct: 442 MMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDAR 501

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            +F+ M  K ++SW ++I GL K+G                       LG         E
Sbjct: 502 LLFNKMVRKDIISWTAMIGGLAKSG-----------------------LGA--------E 530

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A+ +F+ M    +K +RVT   + +AC    ALD  + I+  + + G+  D  +A  LV+
Sbjct: 531 ALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVN 590

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M++ CG  + A QVF RM +RD+ A+ A IG  A    G++A++LF+ +  +G+KPD + 
Sbjct: 591 MYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVT 650

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           ++ +L AC++ G +     +  S+    G          +V    + G   +AL +   M
Sbjct: 651 YINMLNACANSGSLEWAKEI-HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM 709

Query: 636 PVEPNDVIWGSLLAACQKH 654
            ++ N + W +++  C +H
Sbjct: 710 -MKRNVISWNAIIGGCAQH 727



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 278/563 (49%), Gaps = 45/563 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K  H HIL  G     +  + +V   A+ G+++     ++ F+  +  +     L  +N+
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKD---CRQVFEKLVNRD-----LIAWNT 416

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +I G +  G   EA  +Y ++   G++P+K T+  +LNAC   +A   G ++H  +VK G
Sbjct: 417 MIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDG 476

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           F  D+ V+N LI+ Y  CG I D R +F++M  ++++SWT++I   A+  L  EA+ +F 
Sbjct: 477 FMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQ 536

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M + G+KPN VT   +++AC+    L+ G R+   + E G+  +A + N LV+MY  CG
Sbjct: 537 DMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCG 596

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +V  A+Q+F     R++V  N ++  Y    L +EAL + D +   G +PD+VT ++ ++
Sbjct: 597 SVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 656

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A A  G L   +  H  VL++G     S+ N ++  Y KCG    A  +FD M  + V+S
Sbjct: 657 ACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVIS 716

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           WN++I                               GG  Q    ++ ++LF  M  E I
Sbjct: 717 WNAII-------------------------------GGCAQHGRGQDVLQLFERMKMEGI 745

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAM 527
           K D VT V + SAC + G L+  +  +  + ++ GI   ++    +VD+  R G      
Sbjct: 746 KPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVE 805

Query: 528 QVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD-SIVFVGVLTACSH 585
            + + M  + +   W A +GA  + GN   A       L+  + PD + V+V +    + 
Sbjct: 806 ALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLK--LDPDNAAVYVALSHMYAA 863

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQ 608
            G+ +    L R + +  GV+ +
Sbjct: 864 AGMWDSAAKL-RKLMEQRGVTKE 885



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 267/556 (48%), Gaps = 74/556 (13%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM--SE 201
           +L  C +      G +VH  I++     D +  N LIN Y +CG I + R+V++++  +E
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTE 206

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R V SW +++    +    +EA+ L  EM + G+     T + ++S+C     LE G  +
Sbjct: 207 RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266

Query: 262 CAYIDELGMKANAL----MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
             +++   MKA  L    + N +++MY KCG++  A+++F + + +++V    I+  Y  
Sbjct: 267 --HVE--AMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYAD 322

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
            G +  A  I  +M   G  P+R+T ++ ++A +    L  G+  H ++L  G E   ++
Sbjct: 323 CGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAV 382

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
              ++ MY KCG  +   ++F+ + N+ +++WN++I GL + G+ E A E++ +M     
Sbjct: 383 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQM----- 437

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                      +E M                  +++T V + +AC    AL   + I++ 
Sbjct: 438 ----------QREGMMP----------------NKITYVILLNACVNPTALHWGREIHSR 471

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           + K+G   D+ +  AL+ M+ARCG  + A  +F +M ++D+ +WTA IG +A  G G +A
Sbjct: 472 VVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEA 531

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM------TDIHGVSP---- 607
           + +F +M + G+KP+ + +  +L ACS    ++ G  + + +      TD H  +     
Sbjct: 532 LAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNM 591

Query: 608 --------------------QIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDVIW 644
                                IV Y  M+       L  EAL L   +  E   P+ V +
Sbjct: 592 YSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTY 651

Query: 645 GSLLAACQKHQNVDIA 660
            ++L AC    +++ A
Sbjct: 652 INMLNACANSGSLEWA 667



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 237/516 (45%), Gaps = 77/516 (14%)

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           ++G + NS   + ++  C ++++L  G  V  +I +     +   VNAL++MY++CG+++
Sbjct: 134 QQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIE 193

Query: 292 TAKQLFGECK--DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
            A+Q++ +    +R +   N ++  YV+ G   EAL +L EM  HG    R T +  +S+
Sbjct: 194 EARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSS 253

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                 L CGR  H   ++  L    ++ N +++MY KCG    A  +FD M  K+VVSW
Sbjct: 254 CKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSW 313

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
             +I G    G  E A E+F +M                                 E + 
Sbjct: 314 TIIIGGYADCGHSEIAFEIFQKMQ-------------------------------QEGVV 342

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +R+T + V +A     AL   K ++++I   G   D+ + TALV M+A+CG  +   QV
Sbjct: 343 PNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQV 402

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS----- 584
           F ++  RD+ AW   IG +A  GN E+A E++++M R+G+ P+ I +V +L AC      
Sbjct: 403 FEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTAL 462

Query: 585 ------HGGLVNQGWH------------------------LFRSMTDIHGVSPQIVHYGC 614
                 H  +V  G+                         LF  M     V   I+ +  
Sbjct: 463 HWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKM-----VRKDIISWTA 517

Query: 615 MVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           M+  L ++GL  EAL + + M    ++PN V + S+L AC     +D      +++ E  
Sbjct: 518 MIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAG 577

Query: 672 -PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
               + V   L N+Y+  G   +  +V  +M ++ I
Sbjct: 578 LATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI 613



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 10/176 (5%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           N  +L   K+ H  +LK G     S  + +V T A+ G+F     A   FD  +K N  S
Sbjct: 660 NSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSD---ALLVFDKMMKRNVIS 716

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
                +N++I G +  G G + + L+  +   GI PD  TF  +L+AC+ +    EG + 
Sbjct: 717 -----WNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRY 771

Query: 161 HGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
             ++ +  G    +    C+++  G  G + +   +   M  + N   W +L+ AC
Sbjct: 772 FCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGAC 827



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 36/193 (18%), Positives = 88/193 (45%), Gaps = 15/193 (7%)

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           + AM++ + +  +  +V+    + +   C  +  L   + ++ +I ++    D     AL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 514 VDMFARCGDPQRAMQVFRRME--KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           ++M+ +CG  + A QV+ ++   +R V +W A +      G  E+A++L  EM + G+  
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLF------RSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
                + +L++C     +  G  +       R + D++  +       C++++  + G +
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN-------CILNMYAKCGSI 295

Query: 626 GEALDLIKSMPVE 638
            EA ++   M  +
Sbjct: 296 HEAREVFDKMETK 308


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 306/831 (36%), Positives = 473/831 (56%), Gaps = 45/831 (5%)

Query: 14  TPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCT 73
           TP+  T    H  K      PS   L+ C ++ EL Q    I+K GL  +  + +K+V  
Sbjct: 64  TPSSRTYIPSHVYK-----HPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSL 118

Query: 74  CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
             + G   SL  A + F   I+D        +Y+++++GY+      +A+S +  +   G
Sbjct: 119 FCKFG---SLHEAARVFQP-IEDKIDE----LYHTMLKGYARNSSLDDAVSFFCRMRYDG 170

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P  + F ++L  C  ++   +G ++H  ++  GF  +VF    ++N Y +C  + +  
Sbjct: 171 VRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAY 230

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           ++FD M ER++V W ++I   A+    K A+ L   M EEG +P+S+T+V ++ A A + 
Sbjct: 231 KMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +L +G  +  Y    G ++   +  ALVDMY KCG+V TA+ +F     + +V  N+++ 
Sbjct: 291 SLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMID 350

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            YV+ G    A+ I  +M+        VT++ A+ A A LGD+  GR  H  + +  L  
Sbjct: 351 GYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGS 410

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
             S+ N++I MY KC + ++A  IF+++ +KT+VSWN++I G  +NG +           
Sbjct: 411 DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRI----------- 459

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                                EA++ F  M  + IK D  TMV V  A   L  L  AKW
Sbjct: 460 --------------------NEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKW 499

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+  + +  +  ++ +ATALVDM+A+CG    A ++F  M++R V+ W A I      G 
Sbjct: 500 IHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGL 559

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G+ A+ELF +M ++ IKP+ + F+ VL+ACSH GLV +G+  F SM   +G+ P + HYG
Sbjct: 560 GKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYG 619

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
            MVDLLGRA  L EA D I+ MP+EP   ++G++L AC+ H+NV++   AA RI +LDP+
Sbjct: 620 AMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPD 679

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G HVLL+NIYA+A  W  VARVR  M+++GI+K PG S +E+  +VH F SG  SHP+
Sbjct: 680 DGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQ 739

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I + L  +  R++ AGY+PD TN + DV++  K+ LL+ HSEKLA+AF L++TS   
Sbjct: 740 AKKIYAFLETLGNRIKAAGYMPD-TNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGT 798

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            I + KNLR+C DCH+  K +S V  REIIVRD  RFH F+ G+CSC D+W
Sbjct: 799 TIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 292/813 (35%), Positives = 455/813 (55%), Gaps = 40/813 (4%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           + P+   L+ C +L EL+     I K GL  +  + +K+V    + G+ +      +  D
Sbjct: 37  EHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPID 96

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
             +          +Y ++++G++ +    +A+  +V +    + P  + F ++L  C   
Sbjct: 97  KKLN--------VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDE 148

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
           +    G ++HG +VK GF  D+F    L N Y +C  + + R+VFD M ER++VSW +++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIV 208

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
              ++  + + A+ +   M EE +KP+ +T+V V+ A + L+ + +G  +  Y    G  
Sbjct: 209 AGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFD 268

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           +   +  ALVDMY KCG++ TA+ LF    +RN+V  N+++  YV+    +EA+ I  +M
Sbjct: 269 SLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKM 328

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
           L  G +P  V+++ A+ A A LGDL  GR  H   +   L+   S+ N++I MY KC   
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCK-- 386

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
                                        +V++A  +F ++  R  +SWN M+ G  Q  
Sbjct: 387 -----------------------------EVDTAASMFGKLQSRTIVSWNAMILGFAQNG 417

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  F  M +  +K D  T V V +A   L     AKWI+  + +N +  ++ + T
Sbjct: 418 RPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTT 477

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           ALVDM+A+CG    A  +F  M +R V+ W A I      G G+ A+ELF EM +  I+P
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRP 537

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           + + F+ V++ACSH GLV  G   F  M + + + P + HYG MVDLLGRAG L EA D 
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDF 597

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I  MPV+P   ++G++L ACQ H+NV+ A   AER+ EL+PE  G HVLL+NIY +A  W
Sbjct: 598 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMW 657

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             V +VR+ M  QG+RK PG S +E+  +VH F SG  +HP    I + L ++ C++++A
Sbjct: 658 EKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEA 717

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           GYVPD TN++L +++  K+ LLS HSEKLA++FGL++T+    I V KNLR+C DCH+  
Sbjct: 718 GYVPD-TNLILGLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNAT 776

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K +S V  REIIVRD  RFH F+ G+CSC D+W
Sbjct: 777 KYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 300/811 (36%), Positives = 462/811 (56%), Gaps = 46/811 (5%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPS-YISKVVCTC-AQMGTFESLTYAQKAFDYY 93
           L++C    +L   KQ H HIL+ G+  KP+ YI+  +    A  G   S+  A++ FD +
Sbjct: 35  LQSCVKAKDLAVGKQVHEHILRCGV--KPNVYITNTLLKLYAHCG---SVNEARQLFDKF 89

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
                ++ ++  +N +I GY+  GL  EA +L+  +    + PDKFTF  +L+AC+  + 
Sbjct: 90  -----SNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAV 144

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G ++H  +++ G   D  V N LI+ Y +CG + D RRVFD M+ R+ VSWT+L  A
Sbjct: 145 LNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA 204

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A     +E++  +  M++E ++P+ +T + V+SAC  L  LE G ++ A+I E    ++
Sbjct: 205 YAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSD 264

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  AL  MYMKCGA   A+++F     R+++  NT++  +V  G   EA      ML 
Sbjct: 265 VRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLE 324

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  PDR T  + +SA A+ G L  G+  H    ++GL       N +I+MY K G  + 
Sbjct: 325 EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKD 384

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++FD M  + VVS                               W T+LG     +  
Sbjct: 385 ARQVFDRMPKRDVVS-------------------------------WTTLLGRYADCDQV 413

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
            E+   F+ ML + +K +++T + V  AC    AL   K I+A + K G+  D+ +  AL
Sbjct: 414 VESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNAL 473

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           + M+ +CG  + A++VF  M  RDV  W   IG +   G G +A++ +  M  +G++P++
Sbjct: 474 MSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNA 533

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
             FV VL+AC    LV +G   F  M+  +G+ P   HY CMVD+L RAG L EA D+I 
Sbjct: 534 ATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVIL 593

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           ++P++P+  +WG+LLAAC+ H NV+I   AAE   +L+P+ +G++V LS IYA+AG W +
Sbjct: 594 TIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRD 653

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           VA++R  MKE+G++K PG S IE+ G+VH F + D+SHP    I + L  +  +++  GY
Sbjct: 654 VAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGY 713

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VPD   V+ D+D++ K+  + HHSEKLA+A+GLIST    PIR+ KNLR+C DCH+  K 
Sbjct: 714 VPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKF 773

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +SK+  REII RD +RFH F+ G CSC D+W
Sbjct: 774 ISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 213/418 (50%), Gaps = 37/418 (8%)

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
           +G + +S   V ++ +C K ++L +G +V  +I   G+K N  + N L+ +Y  CG+V+ 
Sbjct: 22  KGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNE 81

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A+QLF +  ++++V  N ++S Y   GLA+EA  +   M      PD+ T +S +SA + 
Sbjct: 82  ARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSS 141

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
              L  GR  H  V+  GL    ++ N +I MY KCG    A R+FD M+++  VSW   
Sbjct: 142 PAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW--- 198

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
                                        T+ G   +    EE+++ +  ML ER++  R
Sbjct: 199 ----------------------------TTLTGAYAESGYGEESLKTYHAMLQERVRPSR 230

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           +T + V SACG L AL+  K I+A+I ++  H D++++TAL  M+ +CG  + A +VF  
Sbjct: 231 ITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFEC 290

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +  RDV AW   I      G  E+A   F+ ML +G+ PD   +  VL+AC+  G + +G
Sbjct: 291 LSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARG 350

Query: 593 WHLF-RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLL 648
             +  R+  D  G+   +     ++++  +AG + +A  +   MP    DV+ W +LL
Sbjct: 351 KEIHARAAKD--GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP--KRDVVSWTTLL 404



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 31/266 (11%)

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +L  +   GP+ D    +  + +  +  DL  G+  H ++LR G++    I NT++ +Y 
Sbjct: 15  VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
            CG    A ++FD  SNK+VVSWN +I+G    G                          
Sbjct: 75  HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRG-------------------------- 108

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                + +EA  LF +M  ER++ D+ T V + SAC     L+  + I+  + + G+  D
Sbjct: 109 -----LAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLAND 163

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             +  AL+ M+A+CG  + A +VF  M  RD  +WT   GA A  G GE++++ ++ ML+
Sbjct: 164 TTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQ 223

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQG 592
           + ++P  I ++ VL+AC     + +G
Sbjct: 224 ERVRPSRITYMNVLSACGSLAALEKG 249


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 286/733 (39%), Positives = 445/733 (60%), Gaps = 8/733 (1%)

Query: 120 VEAISL-YVELAGFGILPDKFTFPF--VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE 176
           +EA+S+  + L  F  L +   F    +L+   K S+  +  +VH  +++ G   D F  
Sbjct: 1   MEALSVPSISLQNFSTLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSA 60

Query: 177 NCLI--NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           + L   +       +   R +FD++ + N+ +W +LI A A    P ++  +F +++++ 
Sbjct: 61  SKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKC 120

Query: 235 IK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
              PN  T   VI A ++L+   +G  V     +L    +  ++N+LV  Y  CG +  A
Sbjct: 121 EDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMA 180

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           ++LF     +++V  N+++S + +     +AL +  +M      P+ VTM+  +SA A+ 
Sbjct: 181 ERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKK 240

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
            DL  GR    Y+ R G++   ++CN M+DMY KCG  + A ++FD M  + V SW  ++
Sbjct: 241 LDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIML 300

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF-RVMLSERIKVDR 472
            G  K GD ++AR VF+ MP ++  +WN ++    Q    +EA+ +F  + LS+  K D 
Sbjct: 301 DGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDE 360

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           VT+V   SAC  LGA+DL  WI+ YI++ GI  +  L ++LVDM+A+CG  ++A++VF  
Sbjct: 361 VTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYS 420

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +E+RDV  W+A I  + M G G+ A++LF EM    +KP+S+ F  VL ACSH GLV++G
Sbjct: 421 VEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEG 480

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F  M  ++GV P++ HY CMVD+LGRAG L EA++LI  M   P+  +WG+LL AC 
Sbjct: 481 RVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACS 540

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H NV++   A++++ +L+P   G  VLLSNIYA  G+W  V+ +R  M++  ++K PG 
Sbjct: 541 LHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGC 600

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE-KKY 771
           SSIE NG VHEF  GD +HP  +NI S L E+  +L+  GY P+ +++L  ++E + K+ 
Sbjct: 601 SSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQ 660

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
            LS HSEKLA+AFGL++ + + PIRVVKNLR+C DCH+FAKLVS+VYDR+I++RD  RFH
Sbjct: 661 ALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFH 720

Query: 832 FFRQGSCSCSDFW 844
            FR G CSC D+W
Sbjct: 721 HFRDGHCSCMDYW 733



 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 179/555 (32%), Positives = 291/555 (52%), Gaps = 72/555 (12%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           + ++  C +  +LK+ H  +L+ GL   P   SK+  T + + +F +L YA+  FD   +
Sbjct: 29  LSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLF-TASALSSFSTLDYARNLFDQIPQ 87

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF-GILPDKFTFPFVLNACTKSSAF 154
            N     L+ +N+LIR Y+      ++  ++++L      LP+KFTFPFV+ A ++  A 
Sbjct: 88  PN-----LYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKAS 142

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  VHG  +K+ F  D+++ N L+ FYG CGD+    R+F  +S ++VVSW S+I A 
Sbjct: 143 RVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAF 202

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A+ + P++A+ LF +M  E + PNSVTMV V+SACAK  +LE G  VC+YI+  G+K + 
Sbjct: 203 AQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDL 262

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRN------------------------------ 304
            + NA++DMY KCG+VD A++LF E  +R+                              
Sbjct: 263 TLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVK 322

Query: 305 -LVLCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMC 362
            +   N ++S Y + G  +EALAI +E+ L    +PD VT++S +SA AQLG +  G   
Sbjct: 323 EIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWI 382

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H Y+ R G+     + ++++DMY KCG  E A  +F  +  + V  W+++IAGL  +G  
Sbjct: 383 HVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRG 442

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           ++A ++F EM                     +EA          ++K + VT   V  AC
Sbjct: 443 KAAIDLFFEM---------------------QEA----------KVKPNSVTFTNVLCAC 471

Query: 483 GYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSA 540
            + G +D  +  +  +E   G+  +M+    +VD+  R G  + AM++   M      S 
Sbjct: 472 SHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASV 531

Query: 541 WTAAIGAMAMEGNGE 555
           W A +GA ++  N E
Sbjct: 532 WGALLGACSLHMNVE 546



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 190/401 (47%), Gaps = 37/401 (9%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS+I  ++      +A+ L++++    ++P+  T   VL+AC K      G  V   I 
Sbjct: 195 WNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIE 254

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT----------------- 208
           + G   D+ + N +++ Y +CG + D +++FDEM ER+V SWT                 
Sbjct: 255 RKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARL 314

Query: 209 --------------SLICACARRDLPKEAVYLFFEMVEEGI-KPNSVTMVCVISACAKLQ 253
                          LI A  +   PKEA+ +F E+    I KP+ VT+V  +SACA+L 
Sbjct: 315 VFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLG 374

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            ++LG  +  YI   G+  N  ++++LVDMY KCG+++ A ++F   ++R++ + + +++
Sbjct: 375 AIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIA 434

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM-CHGYVLRNGLE 372
                G  + A+ +  EM     +P+ VT  + + A +  G +  GR+  H      G+ 
Sbjct: 435 GLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVV 494

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDV---ESAREV 428
                   M+D+  + G  E A  + + MS     S W +L+     + +V   E A + 
Sbjct: 495 PEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQ 554

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
             ++  R+H +   +     +   +E+  EL ++M    +K
Sbjct: 555 LLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELK 595


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 295/826 (35%), Positives = 475/826 (57%), Gaps = 40/826 (4%)

Query: 19  TLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMG 78
           TL+ +    +     P+   L+ C ++ EL Q    ++K GL ++  + +K+V   ++ G
Sbjct: 36  TLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYG 95

Query: 79  TFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
              S+  A + F+    D++  A   +Y+++++GY+       A++    +    + P  
Sbjct: 96  ---SINEAARVFEPI--DDKLDA---LYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV 147

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           + F ++L  C  ++    G ++HG ++   F  +VF    ++N Y +C  I D  ++FD 
Sbjct: 148 YNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDR 207

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M ER++VSW ++I   ++    K+A+ L   M +EG +P+S+T+V V+ A A +  L +G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             +  Y    G      +  AL DMY KCG+V+TA+ +F     + +V  N++M  YV+ 
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G   +A+A+ ++ML  G  P  VT++ A+ A A LGDL  G+  H +V +  L    S+ 
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N++I MY KC + ++A  IF++++ +T VSWN++I G  +NG V  A   FSEM      
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKS---- 443

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                LG                      +K D  TMV V  A   L     AKWI+  I
Sbjct: 444 -----LG----------------------MKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            ++ +  ++ + TALVDM+++CG    A ++F  +  R V  W A I      G G  A+
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           +LF++M +  ++P+ I ++ V++ACSH GLV++G   F+SM   +G+ P + HYG MVDL
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAG + EA D I++MP+ P   ++G+   AC+ H+N+++   AA+++ EL+P++ G H
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYH 656

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLL+NIYAS  KW+ VA VR  M+++G++K PG S +E+  +VH F SG  +HP+   I 
Sbjct: 657 VLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIY 716

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
           + L E+   ++ AGYVPD TN++LDV++  ++ LL+ HSEKLA+AFGL++TS    I V 
Sbjct: 717 AFLEELVYEIKAAGYVPD-TNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVR 775

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH+  K +S V  REIIVRD  RFH F+ G CSC D+W
Sbjct: 776 KNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 286/734 (38%), Positives = 434/734 (59%), Gaps = 67/734 (9%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSE 201
           +L+ C     F    Q+H  I+K G    +F  + LI F      GDI     +F+ + E
Sbjct: 35  LLSKCQSIRTFK---QIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            N+  W S+I   +    P  A+  F  M+  G++PNS T   ++ +CAKL +   G ++
Sbjct: 92  PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAV------------------------------- 290
            A++ +LG  ++  +  +L++MY + G +                               
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           D A+QLF E   +++V  N +++ Y ++G ++EAL + ++M      P+  T++S +SA 
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           AQ   L  G     ++   GL     + N +IDMY KCG                     
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCG--------------------- 310

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                     D+++ARE+F +M  RD ISWN M+GG T    ++EA+ LFR ML+  ++ 
Sbjct: 311 ----------DLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEP 360

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
             +T + +  +C +LGA+DL KWI+AYI KN       L+T+L+D++A+CG+   A QVF
Sbjct: 361 TEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVF 420

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
             M+ + +++W A I  +AM G  ++A ELF++M   GI+P+ I FVG+L+AC H GLV+
Sbjct: 421 DGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            G   F SM   + +SP+  HYGCM+DLLGRAGL  EA  L+++M V+P+  IWGSLL A
Sbjct: 481 LGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA 540

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H  V++    AER+ EL+P+  G +VLLSNIYA AGKW +VAR+R ++ ++G++K+P
Sbjct: 541 CRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVP 600

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G ++IEV+  VHEF  GD+ HP+  +I  ML E++ +L+  G+V D + VL D+DE+ K+
Sbjct: 601 GCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKE 660

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
             LSHHSEKLA+AFGLIST    PIR++KNLR+C +CHS  KL+SK+++REII RD NRF
Sbjct: 661 GALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRF 720

Query: 831 HFFRQGSCSCSDFW 844
           H F+ GSCSC+D+W
Sbjct: 721 HHFKDGSCSCNDYW 734



 Score =  281 bits (720), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 177/576 (30%), Positives = 299/576 (51%), Gaps = 72/576 (12%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           ++ PS+  L  C+++   KQ H HI+K GL +    +SK++   A +     ++YA   F
Sbjct: 28  QEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSA-VSRSGDISYAISLF 86

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           +   + N     LF++NS+IRG S       A+  +V +   G+ P+ +TFPF+L +C K
Sbjct: 87  NSIEEPN-----LFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAK 141

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD------------------- 191
            ++  EG Q+H  ++K+GF  DVF+   LIN Y + G++ +                   
Sbjct: 142 LASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTAL 201

Query: 192 ------------GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
                        R++FDEM  ++VVSW ++I   A+    KEA+ LF +M +  + PN 
Sbjct: 202 IAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNE 261

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            T+V V+SACA+   L+LG+ + ++I++ G+ +N  +VNAL+DMY KCG + TA++LF +
Sbjct: 262 STIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDD 321

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
             +R+++  N ++  Y  +   +EALA+  EML  G  P  +T LS + + A LG +  G
Sbjct: 322 MLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG 381

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           +  H Y+ +N      S+  ++ID+Y KCG    A ++FD M  K++ SWN++I GL  +
Sbjct: 382 KWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMH 441

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G  + A E+FS+M                                S+ I+ + +T VG+ 
Sbjct: 442 GQADKAFELFSKMS-------------------------------SDGIEPNEITFVGIL 470

Query: 480 SACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRD 537
           SAC + G +DL +  + + ++   I    Q    ++D+  R G  + A  + + ME K D
Sbjct: 471 SACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPD 530

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            + W + +GA    G  E   EL  E L + ++PD+
Sbjct: 531 GAIWGSLLGACRDHGRVELG-ELVAERLFE-LEPDN 564


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 286/771 (37%), Positives = 451/771 (58%), Gaps = 23/771 (2%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           FES+ + Q+              +  +N++I  Y+  G   EA+ LY  +   G+  D  
Sbjct: 65  FESMDWRQR-------------NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHV 111

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           TF  VL AC   S+  +G ++H  +   G D    + N L+  Y   G + D +R+F  +
Sbjct: 112 TFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL 168

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             R+  SW ++I A ++      A+ +F EM +  +KPNS T + VIS  +  + L  G 
Sbjct: 169 QTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGR 227

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ A I   G   + ++  AL++MY KCG+   A+++F + K R++V  N ++  YV  G
Sbjct: 228 KIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNG 287

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              EAL +  ++ + G +  + T +S + A + +  L  GR+ H ++L  GL+   ++  
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG---DVESAREVFSEMPGRD 436
            +++MY KCG  E A ++F+ M N+  V+W++LI     NG   D   AR+VF  +  RD
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIY 495
            ISWN M+    Q      AM++FR M  +  +K D VT + V  AC  LG L   K ++
Sbjct: 408 TISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           A I ++ +  ++ +   L++M+ARCG  + A ++F   +++ V +WTA + A +  G   
Sbjct: 468 AQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A++LF EM  +G+KPD + +  +L  C+HGG + QGW  F  M ++H ++P   H+  M
Sbjct: 528 EALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAM 587

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLLGR+G L +A +L++SMP EP+ V W + L AC+ H  +++   AAER+ ELDP  +
Sbjct: 588 VDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSST 647

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
             ++ +SNIYA+ G W  VA VR +M+E+G++KLPG S IEV+GK+HEF+SG + HP  +
Sbjct: 648 APYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTD 707

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT-MP 794
            I   L  ++  +R AGYVPD   VL DV E EK+ +L +HSEK+A+AFGL+S+  +  P
Sbjct: 708 EICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEP 767

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH-FFRQGSCSCSDFW 844
           IRVVKNLR+C DCH+  K ++++  R+IIVRD NRFH F   G CSC D+W
Sbjct: 768 IRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 169/579 (29%), Positives = 278/579 (48%), Gaps = 48/579 (8%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD  TF  VL +C+      EG  +H  I    F+RD  V N LI+ YG+C  +VD R V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 196 FDEMS--ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL- 252
           F+ M   +RNVVSW ++I A A+     EA+ L++ M  +G+  + VT V V+ AC+ L 
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
           Q  E+ +RV       G+ +   + NALV MY + G+V  AK++F   + R+    N ++
Sbjct: 125 QGREIHNRVFYS----GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
             + + G    AL I  EM     +P+  T ++ +S  +    L  GR  H  ++ NG +
Sbjct: 181 LAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               +   +I+MY KCG    A  +FD M  + +VSWN +I   + NGD           
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGD----------- 288

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                               F EA+EL++ +  E  K  + T V +  AC  + AL   +
Sbjct: 289 --------------------FHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR 328

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++++I + G+  ++ +ATALV+M+A+CG  + A +VF  M+ RD  AW+  IGA A  G
Sbjct: 329 LVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNG 388

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G+ A +      R G + D+I +  ++T     G       +FR MT   G+ P  V +
Sbjct: 389 YGKDARKARKVFDRLGSR-DTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTF 447

Query: 613 GCMVDLLGRAGLLGEALDL---IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
             +++     G L E   L   I    +E N V+  +L+    +  +++     AER+  
Sbjct: 448 IAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE----EAERLFA 503

Query: 670 LDPEKSGVH-VLLSNIYASAGKWTNVARVRLQMKEQGIR 707
              EK+ V    +   ++  G++     +  +M  +G++
Sbjct: 504 AAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 197/417 (47%), Gaps = 39/417 (9%)

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           +P++VT + V+ +C+   ++  G  +   I     + + ++ NAL+ MY KC ++  A+ 
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 296 LFG--ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           +F   + + RN+V  N +++ Y + G + EAL +   M L G   D VT +S + A + L
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
                GR  H  V  +GL+ + S+ N ++ MY + G    A R+F  +  +   SWN++I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
               ++GD   A  +F EM                                   +K +  
Sbjct: 181 LAHSQSGDWSGALRIFKEMKC--------------------------------DVKPNST 208

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T + V S       L   + I+A I  NG   D+ +ATAL++M+ +CG    A +VF +M
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKM 268

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
           +KRD+ +W   IG   + G+  +A+EL+ ++  +G K     FV +L ACS    + QG 
Sbjct: 269 KKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG- 327

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            L  S     G+  ++     +V++  + G L EA  +  +M    + V W +L+ A
Sbjct: 328 RLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 34/293 (11%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY--- 92
           +G+  + K L + +  H HIL++GL  + +  + +V   A+ G+ E    A+K F+    
Sbjct: 315 LGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEE---ARKVFNAMKN 371

Query: 93  -----------------YIKDNETSATLF---------MYNSLIRGYSCIGLGVEAISLY 126
                            Y KD   +  +F          +N++I  Y   G  V A+ ++
Sbjct: 372 RDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIF 431

Query: 127 VELAG-FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
            E+ G  G+ PD  TF  VL AC       E   +H  I +   + +V V N LIN Y  
Sbjct: 432 REMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYAR 491

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
           CG + +  R+F    E+ VVSWT+++ A ++     EA+ LF EM  EG+KP+ VT   +
Sbjct: 492 CGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSI 551

Query: 246 ISACAKLQNLELGDRVCAYIDEL-GMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +  C    +LE G R    + EL  +   A    A+VD+  + G +  AK+L 
Sbjct: 552 LFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELL 604



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 151/344 (43%), Gaps = 49/344 (14%)

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           +PD VT L+ + + +  GD++ GR  H  +  +  E    + N +I MY KC     A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 397 IFDHMS--NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
           +F+ M    + VVSWN++IA   +NG    A  ++          W   L GL       
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLY----------WRMNLQGL------- 106

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
                           D VT V V  AC  L      + I+  +  +G+     LA ALV
Sbjct: 107 --------------GTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALV 149

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            M+AR G    A ++F+ ++ RD ++W A I A +  G+   A+ +F EM +  +KP+S 
Sbjct: 150 TMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNST 208

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            ++ V++  S   ++ +G  +   +   +G    +V    ++++ G+ G   EA ++   
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIV-ANGFDTDLVVATALINMYGKCGSSHEAREVFDK 267

Query: 635 MPVEPNDVIW----------GSLLAACQKHQNVDIAAYAAERIT 668
           M  + + V W          G    A + +Q +D+  +   + T
Sbjct: 268 MK-KRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKAT 310


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/720 (39%), Positives = 425/720 (59%), Gaps = 65/720 (9%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  I+K G     F  + LI F      G++     +F+ + + N   W ++I   + 
Sbjct: 50  QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSL 109

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
              P  A+  +  M+  G++PNS T   ++ +CAK+   + G ++  ++ +LG++++  +
Sbjct: 110 SSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFV 169

Query: 277 VNALVDMYMKCGAV-------------------------------DTAKQLFGECKDRNL 305
             +L++MY + G +                               D A++LF E   R+ 
Sbjct: 170 HTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDA 229

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  N +++ Y + G   EALA   EM      P+  TM++ +SA AQ G L  G     +
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +  +GL     + N +IDMY KCG                               D++ A
Sbjct: 290 IEDHGLGSNLRLVNALIDMYSKCG-------------------------------DLDKA 318

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           R++F  +  +D ISWN M+GG +  N ++EA+ LFR M    ++ + VT V +  AC YL
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYL 378

Query: 486 GALDLAKWIYAYIEKNGIH-CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           GALDL KWI+AYI+K  +   +  L T+L+DM+A+CG+ + A QVF  M+ + + +W A 
Sbjct: 379 GALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAM 438

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I  +AM G+   A+ELF +M  +G +PD I FVGVL+ACSH GLV  G   F SM + + 
Sbjct: 439 ISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYD 498

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           +SP++ HYGCM+DLLGRAGL  EA  L+K+M ++P+  IWGSLL AC+ H NV++  +AA
Sbjct: 499 ISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAA 558

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           + + EL+PE  G +VLLSNIYA+AG+W +VAR+R ++ ++G++K+PG SSIEV+  VHEF
Sbjct: 559 KHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEF 618

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
             GD+ H +  +I  ML E++  L  AG+VPD + VL D+DE+ K+  LSHHSEKLA+AF
Sbjct: 619 LVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAF 678

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GLIST     IR+VKNLR+C +CHS  KL+SK+++REII RD NRFH F+ GSCSC D+W
Sbjct: 679 GLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 191/590 (32%), Positives = 298/590 (50%), Gaps = 73/590 (12%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           MAL      LV+  PT+             ++ PS+  L  CK+   LKQ H  I+K GL
Sbjct: 1   MALASFSPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGL 60

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
            +    +SK++  CA +  F +L+YA   F+   + N+     F++N++IRG S     V
Sbjct: 61  HNTQFALSKLIEFCA-ISPFGNLSYALLLFESIEQPNQ-----FIWNTMIRGNSLSSSPV 114

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
            AI  YV +   G+ P+ +TFPF+L +C K  A  EG Q+HG ++K+G + D FV   LI
Sbjct: 115 GAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLI 174

Query: 181 NFYGECGDI-------------------------------VDGRRVFDEMSERNVVSWTS 209
           N Y + G++                                D RR+F+E+  R+ VSW +
Sbjct: 175 NMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNA 234

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I   A+    +EA+  F EM    + PN  TMV V+SACA+  +LELG+ V ++I++ G
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHG 294

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           + +N  +VNAL+DMY KCG +D A+ LF    +++++  N ++  Y  +   +EALA+  
Sbjct: 295 LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFR 354

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMK 387
           +M      P+ VT +S + A A LG L  G+  H Y+ +   GL    S+  ++IDMY K
Sbjct: 355 KMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN-TSLWTSLIDMYAK 413

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  E A ++F  M  K++ SWN++I+GL  +G                           
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHG--------------------------- 446

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCD 506
              NM   A+ELFR M  E  + D +T VGV SAC + G ++L +  + + +E   I   
Sbjct: 447 -HANM---ALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPK 502

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +Q    ++D+  R G    A  + + ME K D + W + +GA  + GN E
Sbjct: 503 LQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/684 (40%), Positives = 415/684 (60%), Gaps = 6/684 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H   +K G   +      +I F    E GD+   R+VFDE+ + +V  W ++I   +R
Sbjct: 53  QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSR 112

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANAL 275
            +  +  V L+  M+   IKP+  T   ++    K   L+ G  +  +    G + +N  
Sbjct: 113 INCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLF 172

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM--LL 333
           +    + ++  CG V+ A+++F       +V  N ++S Y R     E+  +  EM    
Sbjct: 173 VQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKC 232

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQE 392
               P+ VT++  +SA ++L DL+ G+  +   ++ G+   + I  N +IDM+  CG+ +
Sbjct: 233 ECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMD 292

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +FD M  + V+SW S++ G      ++ AR+ F +MP RD++SW  M+ G  + N 
Sbjct: 293 AARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNR 352

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           F+E + LFR M    +K D  TMV + +AC +LGAL+L +W   YI+KN I  D  +  A
Sbjct: 353 FKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNA 412

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+DM+ +CG+ ++A ++F  M+K+D   WTA I  +A  G+GE+A+ +F+ ML   + PD
Sbjct: 413 LIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPD 472

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            I ++GV+ AC+H GLV +G H F +M   HG+ P + HYGCMVDLLGRAG L EAL++I
Sbjct: 473 EITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVI 532

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
            +MPV+PN ++WGSLL AC+ H+NV +A  AA  I EL+PE   V+VLL NIYA+  KW 
Sbjct: 533 MNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWK 592

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
           N+  VR  M E+GI+K+PG S +E+NG V+EF +GD+SHP+   I + L  M   L +AG
Sbjct: 593 NLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAG 652

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y PD + V LDV E++K+  L  HSEKLA+A+ LIS+ K + IR+VKNLR+C DCH  A 
Sbjct: 653 YSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAM 712

Query: 813 LVSKVYDREIIVRDNNRFHFFRQG 836
           +VSKVY+RE+IVRD  RFH FR G
Sbjct: 713 VVSKVYNRELIVRDKTRFHHFRHG 736



 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 172/594 (28%), Positives = 286/594 (48%), Gaps = 85/594 (14%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES--LTYAQKAF 90
           SP I  L+ C T+ E+ Q H   +K GL     +++KV+  C    T ES  + YA+K F
Sbjct: 37  SP-ISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCC---TKESGDVYYARKVF 92

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           D          ++F++N++I+GYS I      +SLY  +    I PD FTFPF+L   TK
Sbjct: 93  D-----EIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK 147

Query: 151 SSAFGEG-VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
             A   G V ++ A++    D ++FV+   I+ +  CG +   R++FD      VV+W  
Sbjct: 148 DMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNV 207

Query: 210 LICACARRDLPKEAVYLFFEMVE--EGIKPNSVTMVCVISACAKLQNLELGDRVC-AYID 266
           ++    R    +E+  LF EM +  E + PNSVT+V ++SAC+KL++L  G  +   YI 
Sbjct: 208 VLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIK 267

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS------------- 313
           E  ++ N ++ NAL+DM+  CG +D A+ +F E K R+++   +I++             
Sbjct: 268 EGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARK 327

Query: 314 ------------------NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
                              Y+R+   +E L +  +M +   +PD  TM+S ++A A LG 
Sbjct: 328 YFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGA 387

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L  G     Y+ +N ++    I N +IDMY KCG  E A +IF+ M  K   +W ++I G
Sbjct: 388 LELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVG 447

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
           L  NG                                 EEA+ +F  ML   +  D +T 
Sbjct: 448 LANNGHG-------------------------------EEALTMFSYMLEASVTPDEITY 476

Query: 476 VGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +GV  AC ++G +   K  ++ +  ++GI  ++     +VD+  R G  + A++V   M 
Sbjct: 477 IGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMP 536

Query: 535 -KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS----IVFVGVLTAC 583
            K +   W + +GA  +  N + A    NE+L   ++P++    ++   +  AC
Sbjct: 537 VKPNSIVWGSLLGACRVHKNVQLAEMAANEILE--LEPENGAVYVLLCNIYAAC 588


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/771 (36%), Positives = 453/771 (58%), Gaps = 23/771 (2%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           FES+ + Q+              +  +N++I  Y+  G   EA+ LY  +   G+  D  
Sbjct: 65  FESMDWRQR-------------NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHV 111

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           TF  VL AC   S+  +G ++H  +   G D    + N L+  Y   G + D +R+F  +
Sbjct: 112 TFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL 168

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             R+  SW ++I A ++      A+ +F EM  + +KPNS T + VIS  +  + L  G 
Sbjct: 169 QTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGR 227

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ A I   G  ++ ++  AL++MY KCG+   A+++F + K R++V  N ++  YV+ G
Sbjct: 228 KIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNG 287

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              EAL +  ++ + G +  + T +S + A + +  L  GR+ H ++L  GL+   ++  
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG---DVESAREVFSEMPGRD 436
            +++MY KCG  E A ++F+ M N+  V+W++LI     NG   D   AR+VF  +  RD
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIY 495
            I WN M+    Q      AM++FR M  +  +K D VT + V  AC  LG L   K ++
Sbjct: 408 TICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           A I ++ +  ++ +   L++M+ARCG  + A ++F   +++ V +WTA + A +  G   
Sbjct: 468 AQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A++LF EM  +G+KPD + +  +L  C+HGG + QGW  F  M ++HG++P   H+  M
Sbjct: 528 EALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAM 587

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLLGR+G L +A +L++SMP EP+ V W + L AC+ H  +++   AAER+ ELDP  +
Sbjct: 588 VDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSST 647

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
             ++ +SNIYA+ G W  VA VR +M+E+G++KLPG S IEV+GK+HEF+SG + HP  +
Sbjct: 648 APYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTD 707

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT-MP 794
            I   L  ++  +R AGYVPD   VL DV E EK+ +L +HSEK+A+AFGL+S+  +  P
Sbjct: 708 EICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEP 767

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH-FFRQGSCSCSDFW 844
           IRVVKNLR+C DCH+  K ++++  R+II+RD NRFH F   G CSC D+W
Sbjct: 768 IRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 169/579 (29%), Positives = 279/579 (48%), Gaps = 48/579 (8%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD  TF  VL +C+      EG  +H  I    F+RD  V N LI+ YG+C  +VD R V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 196 FDEMS--ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL- 252
           F+ M   +RNVVSW ++I A A+     EA+ L++ M  +G+  + VT V V+ AC+ L 
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
           Q  E+ +RV       G+ +   + NALV MY + G+V  AK++F   + R+    N ++
Sbjct: 125 QGREIHNRVFYS----GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
             + + G    AL I  EM     +P+  T ++ +S  +    L  GR  H  ++ NG +
Sbjct: 181 LAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               +   +I+MY KCG    A  +FD M  + +VSWN +I   ++NGD           
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGD----------- 288

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                               F EA+EL++ +  E  K  + T V +  AC  + AL   +
Sbjct: 289 --------------------FHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR 328

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++++I + G+  ++ +ATALV+M+A+CG  + A +VF  M+ RD  AW+  IGA A  G
Sbjct: 329 LVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNG 388

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G+ A +      R G + D+I +  ++T     G       +FR MT   G+ P  V +
Sbjct: 389 YGKDARKARKVFDRLGSR-DTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTF 447

Query: 613 GCMVDLLGRAGLLGEALDL---IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
             +++     G L E   L   I    +E N V+  +L+    +  +++     AER+  
Sbjct: 448 IAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE----EAERLFA 503

Query: 670 LDPEKSGVH-VLLSNIYASAGKWTNVARVRLQMKEQGIR 707
              EK+ V    +   ++  G++     +  +M  +G++
Sbjct: 504 AAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 196/417 (47%), Gaps = 39/417 (9%)

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           +P++VT + V+ +C+   ++  G  +   I     + + ++ NAL+ MY KC ++  A+ 
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 296 LFG--ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           +F   + + RN+V  N +++ Y + G + EAL +   M L G   D VT +S + A + L
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
                GR  H  V  +GL+ + S+ N ++ MY + G    A R+F  +  +   SWN++I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
               ++GD   A  +F EM                                   +K +  
Sbjct: 181 LAHSQSGDWSGALRIFKEMKC--------------------------------DMKPNST 208

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T + V S       L   + I+A I  NG   D+ +ATAL++M+ +CG    A +VF +M
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKM 268

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
           +KRD+ +W   IG     G+  +A+EL+ ++  +G K     FV +L ACS    + QG 
Sbjct: 269 KKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG- 327

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            L  S     G+  ++     +V++  + G L EA  +  +M    + V W +L+ A
Sbjct: 328 RLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 34/293 (11%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY--- 92
           +G+  + K L + +  H HIL++GL  + +  + +V   A+ G+ E    A+K F+    
Sbjct: 315 LGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEE---ARKVFNAMKN 371

Query: 93  -----------------YIKDNETSATLF---------MYNSLIRGYSCIGLGVEAISLY 126
                            Y KD   +  +F          +N++I  Y   G  V A+ ++
Sbjct: 372 RDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIF 431

Query: 127 VELAG-FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
            E+ G  G+ PD  TF  VL AC       E   +H  I +   + +V V N LIN Y  
Sbjct: 432 REMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYAR 491

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
           CG + +  R+F    E+ VVSWT+++ A ++     EA+ LF EM  EG+KP+ VT   +
Sbjct: 492 CGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSI 551

Query: 246 ISACAKLQNLELGDRVCAYIDEL-GMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +  C    +LE G R    + EL G+   A    A+VD+  + G +  AK+L 
Sbjct: 552 LFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELL 604



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 152/339 (44%), Gaps = 42/339 (12%)

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           +PD VT L+ + + +  GD+  GR  H  +  +  E    + N +I MY KC     A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 397 IFDHMS--NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
           +F+ M    + VVSWN++IA   +NG    A  ++          W   L GL       
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLY----------WRMNLQGL------- 106

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
                           D VT V V  AC  L      + I+  +  +G+     LA ALV
Sbjct: 107 --------------GTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALV 149

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            M+AR G    A ++F+ ++ RD ++W A I A +  G+   A+ +F EM +  +KP+S 
Sbjct: 150 TMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNST 208

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            ++ V++  S   ++ +G  +   +   +G    +V    ++++ G+ G   EA ++   
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIV-ANGFDSDLVVATALINMYGKCGSSHEAREVFDK 267

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           M  +  D++  +++  C   QN D    A E   +LD E
Sbjct: 268 M--KKRDMVSWNVMIGCYV-QNGDFHE-ALELYQKLDME 302


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 315/863 (36%), Positives = 467/863 (54%), Gaps = 78/863 (9%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H H++K G    PS  + +V   ++   F    YA+K     + D  +   +  ++SL+ 
Sbjct: 4   HAHLIKFGFSRDPSLRNHLVTLYSKCRRF---GYARK-----LVDESSELDVVSWSSLLS 55

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
           GY   G   EA+ ++ E+   G+  ++FTFP VL AC+       G +VHG  V  GF+ 
Sbjct: 56  GYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFES 115

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           D FV N L+  Y +CG + D RR+F  + ERNVVSW +L     + +L  EAV LF EMV
Sbjct: 116 DGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMV 175

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
             GI PN  ++  +++ACA LQ  +LG ++   + ++G+  +    NALVDMY K G ++
Sbjct: 176 RSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIE 235

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A  +F +    ++V  N I++  V       AL +LDEM   G RP+  T+ SA+ A A
Sbjct: 236 GAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACA 295

Query: 352 QLGDLLCGRMCHGYVLR------------------------NGLEGWDSI-------CNT 380
            +G    GR  H  +++                        +    +DS+        N 
Sbjct: 296 AMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNA 355

Query: 381 MIDMYMKCGKQEMACRIFDHMS------NKTVVSW------------------------- 409
           +I  Y +CG    A  +F  M       N+T +S                          
Sbjct: 356 LISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSG 415

Query: 410 --------NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                   NSL+    K   ++ A ++F E    D +++ +M+   +Q    EEA++L+ 
Sbjct: 416 IYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYL 475

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M    IK D      + +AC  L A +  K ++ +  K G  CD+  + +LV+M+A+CG
Sbjct: 476 QMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCG 535

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             + A + F  +  R + +W+A IG  A  G+G++A+ LFN+MLR G+ P+ I  V VL 
Sbjct: 536 SIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLC 595

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           AC+H GLVN+G   F  M  + G+ P   HY CM+DLLGR+G L EA++L+ S+P E + 
Sbjct: 596 ACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADG 655

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            +WG+LL A + H+N+++   AA+ + +L+PEKSG HVLL+NIYASAG W NVA+VR  M
Sbjct: 656 FVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFM 715

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           K+  ++K PG S IE+  KV+ F  GD SH   + I + L ++   L  AGY   +   +
Sbjct: 716 KDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDI 775

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +VD+ EK+ LL HHSEKLA+AFGLI+T    PIRV KNLR+C DCH+F K V K+  RE
Sbjct: 776 HNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSRE 835

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           IIVRD NRFH F+ GSCSC D+W
Sbjct: 836 IIVRDINRFHHFKDGSCSCGDYW 858



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/588 (27%), Positives = 270/588 (45%), Gaps = 75/588 (12%)

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           +++H  ++K GF RD  + N L+  Y +C      R++ DE SE +VVSW+SL+    + 
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
              +EA+ +F EM   G+K N  T   V+ AC+  ++L +G +V       G +++  + 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N LV MY KCG +D +++LFG   +RN+V  N + S YV+  L  EA+ +  EM+  G  
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           P+  ++   ++A A L +   GR  HG +L+ GL+      N ++DMY K G+ E A  +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F  +++  VVSWN++IAG + +   + A  +  EM G             T+ NMF    
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSG-----------TRPNMF---- 285

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
                           T+     AC  +G  +L + +++ + K   H D+  A  LVDM+
Sbjct: 286 ----------------TLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMY 329

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           ++C     A + +  M K+D+ AW A I   +  G+   AV LF++M  + I  +     
Sbjct: 330 SKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLS 389

Query: 578 GVLTACS-----------HGGLVNQG----WHLFRSMTDIHGVSPQI------------- 609
            VL + +           H   +  G    +++  S+ D +G    I             
Sbjct: 390 TVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE 449

Query: 610 --VHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAA 664
             V Y  M+    + G   EAL L   M    ++P+  I  SLL AC      +++AY  
Sbjct: 450 DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNAC-----ANLSAYEQ 504

Query: 665 ERITELDPEKSGVHV------LLSNIYASAGKWTNVARVRLQMKEQGI 706
            +   +   K G          L N+YA  G   +  R   ++  +GI
Sbjct: 505 GKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGI 552


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 286/690 (41%), Positives = 427/690 (61%), Gaps = 39/690 (5%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  +++ G   D F  + ++ F    E G +   R VF ++      +  S+I  C  
Sbjct: 6   QIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTD 65

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
           ++L +EA+  + EM+ +G+ P+  T   +  +C   +N   G ++  +  +LG  ++   
Sbjct: 66  KNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTYA 122

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL-HG 335
            N L++MY  CG + +A+++F + +D+ +V   T++  + +     EA+ + D M+    
Sbjct: 123 QNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSEN 182

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMA 394
            +P+ VT+++ ++A A+  DL   +  H Y+  +G  G   + NT ++D+Y KCG     
Sbjct: 183 VKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGF-GRHVVLNTVLMDVYCKCG----- 236

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
           C                          V+ AR++F +   ++  SWN M+ G  +++ +E
Sbjct: 237 C--------------------------VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYE 270

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           EA+ LFR M ++ IK D+VTM  +  AC +LGAL+L KW++AYI+K  I  D+ L TALV
Sbjct: 271 EALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALV 330

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+A+CG  + A+QVF  M ++DV  WTA I  +AM G  E A++ F+EM  +G+KPD+I
Sbjct: 331 DMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAI 390

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            FVGVL ACSH G V++G   F SM+D +G+ P I HYG +VD+LGRAG + EA +LIKS
Sbjct: 391 TFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKS 450

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+ P+  + G LL AC+ H N++ A  AA+++ E+DP  SG +VLLSNIY S+ KW   
Sbjct: 451 MPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEA 510

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
            R R  M E+G+RK PG S IEV+G VHEF  GD SH + + I+ ML +M  +L++AGYV
Sbjct: 511 KRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYV 570

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           PD + VL D+ E+EK+  LS HSEKLA+AFGL+STS   PIRVVKNLR+C DCHS  KL+
Sbjct: 571 PDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLI 630

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SK+Y+REIIVRD NRFH F+ G+CSC  FW
Sbjct: 631 SKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 176/524 (33%), Positives = 271/524 (51%), Gaps = 43/524 (8%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           +++LKQ H  +L+ GL   P   SK+V  C+ +    SL YA+  F      N TS T  
Sbjct: 1   MSQLKQIHAQMLRTGLFFDPFTASKIVAFCS-LQESGSLQYARLVFSQI--PNPTSYTC- 56

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
             NS+IRG +   L  EA+  Y E+   G++PD++TFP +  +C  SS   EG Q+H   
Sbjct: 57  --NSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHS 111

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            K+GF  D + +N L+N Y  CG +V  R+VFD+M ++ VVSW ++I   A+ D P EAV
Sbjct: 112 TKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAV 171

Query: 225 YLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            LF  M++ E +KPN VT+V V++ACA+ ++L +  R+  YIDE G   + ++   L+D+
Sbjct: 172 RLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDV 231

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG V  A+ LF + +++NL   N +++ +V      EAL +  EM   G + D+VTM
Sbjct: 232 YCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTM 291

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            S + A   LG L  G+  H Y+ +  ++   ++   ++DMY KCG  E A ++F  M  
Sbjct: 292 ASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPE 351

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K V++W +LI GL   G  E+A + F EM    HI                         
Sbjct: 352 KDVMTWTALILGLAMCGQAENALQYFDEM----HI------------------------- 382

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
             + +K D +T VGV +AC + G +D       +  +  GI   ++    LVD+  R G 
Sbjct: 383 --KGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGR 440

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
              A ++ + M    D       +GA  + GN E A     ++L
Sbjct: 441 IAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLL 484



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 41/401 (10%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           PS+   K+C+  +E KQ HCH  K G        + ++   +  G    L  A+K F   
Sbjct: 92  PSL--FKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGC---LVSARKVF--- 143

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSS 152
             D     T+  + ++I  ++      EA+ L+   +    + P++ T   VL AC ++ 
Sbjct: 144 --DKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARAR 201

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
                 ++H  I + GF R V +   L++ Y +CG +   R +FD+  E+N+ SW  +I 
Sbjct: 202 DLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMIN 261

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
                   +EA+ LF EM  +GIK + VTM  ++ AC  L  LELG  + AYI +  +  
Sbjct: 262 GHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDV 321

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +  +  ALVDMY KCG+++TA Q+F E  +++++    ++      G A  AL   DEM 
Sbjct: 322 DVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMH 381

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           + G +PD +T +  ++A +  G            +  G+  +    N+M D Y   G Q 
Sbjct: 382 IKGVKPDAITFVGVLAACSHAG-----------FVDEGISHF----NSMSDTY---GIQ- 422

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
                       T+  +  L+  L + G +  A E+   MP
Sbjct: 423 -----------PTIEHYGGLVDILGRAGRIAEAEELIKSMP 452


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 295/812 (36%), Positives = 458/812 (56%), Gaps = 42/812 (5%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           PS   L+ C +L EL Q    I+K G  ++  + +K++    +   F S+T A + F+  
Sbjct: 46  PSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCK---FNSITEAARVFEPV 102

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
               +      +Y+++++GY+      +A+  Y  +    ++P  + F ++L    ++  
Sbjct: 103 EHKLDV-----LYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLD 157

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G ++HG ++  GF  ++F    ++N Y +C  I D  ++F+ M +R++VSW +++  
Sbjct: 158 LRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAG 217

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A+    + AV +  +M E G KP+S+T+V V+ A A L+ L +G  +  Y    G +  
Sbjct: 218 YAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYM 277

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  A++D Y KCG+V +A+ +F     RN+V  NT++  Y + G + EA A   +ML 
Sbjct: 278 VNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLD 337

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQE 392
            G  P  V+M+ A+ A A LGDL  GR  H  +L     G+D S+ N++I MY KC + +
Sbjct: 338 EGVEPTNVSMMGALHACANLGDLERGRYVH-RLLDEKKIGFDVSVMNSLISMYSKCKRVD 396

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +A  +F ++ +KTVV+WN++I G  +NG V  A  +F EM   D                
Sbjct: 397 IAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHD---------------- 440

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
                          IK D  T+V V +A   L     AKWI+    +  +  ++ + TA
Sbjct: 441 ---------------IKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTA 485

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+D  A+CG  Q A ++F  M++R V  W A I      G+G +A++LFNEM    +KP+
Sbjct: 486 LIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPN 545

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            I F+ V+ ACSH GLV +G + F SM + +G+ P + HYG MVDLLGRAG L +A   I
Sbjct: 546 EITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFI 605

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           + MPV+P   + G++L AC+ H+NV++    A+ + +LDP+  G HVLL+N+YASA  W 
Sbjct: 606 QDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWD 665

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            VARVR  M+++GI+K PG S +E+  +VH F SG  +HP+   I + L  +   ++ AG
Sbjct: 666 KVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAG 725

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           YVPD TN + DV+E  K+ LLS HSE+LA+AFGL++T     I + KNLR+C DCH   K
Sbjct: 726 YVPD-TNSIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATK 784

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S V  REIIVRD  RFH F+ G CSC D+W
Sbjct: 785 YISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 281/702 (40%), Positives = 425/702 (60%), Gaps = 39/702 (5%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG--ECGDIVDGRRVFDEMSER 202
           L  CT  S      Q+H  +++     D F  + ++ F    + G +   R VF+++   
Sbjct: 47  LEKCTTMSQLK---QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNP 103

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
              +  S+I     ++LP++A+  +  M+ +G+ P+  T   +  +C  L     G ++ 
Sbjct: 104 TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLH 160

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
            +  +LG  ++A + N L++MY  CG + +A+++F +  ++++V   T++  Y +  L  
Sbjct: 161 CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPH 220

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EA+ +   M +   +P+ +T+++ ++A A+  DL   +  H Y+   G+     + + ++
Sbjct: 221 EAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALM 280

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           D+Y KCG   +A                               R++F++MP ++   WN 
Sbjct: 281 DVYCKCGCYPLA-------------------------------RDLFNKMPEKNLFCWNI 309

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           M+ G  +++ +EEA+ LF  M    +K D+VTM  +  AC +LGAL+L KW++ YIEK  
Sbjct: 310 MINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEK 369

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
           I  D+ L TALVDM+A+CG  + AM+VF+ M ++DV  WTA I  +AM G G +A+ELF+
Sbjct: 370 IEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFH 429

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           EM    +KPD+I FVGVL ACSH GLVN+G   F SM + +G+ P I HYGCMVD+LGRA
Sbjct: 430 EMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRA 489

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G + EA DLI++MP+ P+  +   LL+AC+ H N+ +A  AA+++ ELDP+  G +VLLS
Sbjct: 490 GRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLS 549

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           NIY+S   W    ++R  M E+ I+K PG S+IEV G VHEF  GD SHP+ + I   L 
Sbjct: 550 NIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLD 609

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           +M  RL+ AGYVPD + VL D+DE+EK+  LS HSEKLA+AFGL+ST+   PIRVVKNLR
Sbjct: 610 DMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLR 669

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCHS  K +S+VY+REIIVRD NRFH F +GSCSC DFW
Sbjct: 670 VCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 185/558 (33%), Positives = 280/558 (50%), Gaps = 76/558 (13%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P + SL+ C T+++LKQ H  +L+  L   P   SK+V  CA +    SL YA+  F+  
Sbjct: 42  PCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCA-LHDSGSLPYARLVFNQI 100

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
                 + T F  NS+IRGY+   L  +AI  Y  +   G+ PD+FTFP +  +C     
Sbjct: 101 -----PNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GV 152

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
             EG Q+H    K+GF  D +++N L+N Y  CG +V  R+VFD+M  ++VVSW ++I A
Sbjct: 153 LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 212

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A+ DLP EA+ LF  M    +KPN +T+V V++ACA+ ++LE   +V  YIDE G+  +
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
            ++ +AL+D+Y KCG    A+ LF +  ++NL   N +++ +V      EAL++ +EM L
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQL 332

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G + D+VTM S + A   LG L  G+  H Y+ +  +E   ++   ++DMY KCG  E 
Sbjct: 333 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 392

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A R+F  M  K V++W +LI GL   G                         GL      
Sbjct: 393 AMRVFQEMPEKDVMTWTALIVGLAMCGQ------------------------GL------ 422

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATA 512
            +A+ELF  M    +K D +T VGV +AC + G ++    +  +   K GI   ++    
Sbjct: 423 -KALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGC 481

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           +VDM  R G    A  + + M                                   + PD
Sbjct: 482 MVDMLGRAGRIAEAEDLIQNMP----------------------------------MAPD 507

Query: 573 SIVFVGVLTACS-HGGLV 589
             V VG+L+AC  HG LV
Sbjct: 508 YFVLVGLLSACRIHGNLV 525


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/833 (35%), Positives = 461/833 (55%), Gaps = 27/833 (3%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVV-----CTCA 75
           +K K  P    SI  L  C  L +LK   + H  +++ G+       S  V     C C 
Sbjct: 135 NKVKANPLTVSSI--LPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCV 192

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL 135
           +         AQ  FD     +     +  +NSL   Y   G   + ++++ E+   G+ 
Sbjct: 193 R--------EAQTVFDLMPHRD-----VVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVK 239

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD  T   +L+AC+       G  +HG  +K G   +VFV N L+N Y  C  + + + V
Sbjct: 240 PDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAV 299

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FD M  RNV++W SL         P++ + +F EM   G+KP+ + M  ++ AC++L++L
Sbjct: 300 FDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDL 359

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           + G  +  +  + GM  +  +  ALV++Y  C  V  A+ +F     RN+V  N++ S Y
Sbjct: 360 KSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCY 419

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           V  G  ++ L +  EM+L+G +PD VTMLS + A + L DL  G++ HG+ +R+G+    
Sbjct: 420 VNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV 479

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP-- 433
            +CN ++ +Y KC     A  +FD + ++ V SWN ++     N + E    +FS+M   
Sbjct: 480 FVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRD 539

Query: 434 --GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
               D I+W+ ++GG  + +  EEAME+FR M +   K D  T+  +  AC     L + 
Sbjct: 540 EVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMG 599

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K I+ Y+ ++    D+    ALVDM+A+CG    +  VF  M  +DV +W   I A  M 
Sbjct: 600 KEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMH 659

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           GNG++A+ LF +ML   +KPDS  F  VL+ACSH  LV +G  +F SM+  H V P+  H
Sbjct: 660 GNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEH 719

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y C+VD+  RAG L EA   I+ MP+EP  + W + LA C+ ++NV++A  +A+++ E+D
Sbjct: 720 YTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEID 779

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           P  S  +V L NI  +A  W+  +++R  MKE+GI K PG S   V  +VH F +GD+S+
Sbjct: 780 PNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSN 839

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
            E + I + L E+  +++ AGY PD   VL D+D++EK   L +HSEKLA+AFG+++ + 
Sbjct: 840 MESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNG 899

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              IRV KNLR+C DCH+  K +S V    I+VRD+ RFH F+ G+CSC DFW
Sbjct: 900 QSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 257/512 (50%), Gaps = 32/512 (6%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D+  +  +  +NSL   Y   G   + ++++ ++    +  +  T   +L  C+      
Sbjct: 99  DDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLK 158

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G ++HG +V+ G   DVFV +  +NFY +C  + + + VFD M  R+VV+W SL     
Sbjct: 159 SGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYV 218

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
               P++ + +F EMV +G+KP+ VT+ C++SAC+ LQ+L+ G  +  +  + GM  N  
Sbjct: 219 NCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVF 278

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + NALV++Y  C  V  A+ +F     RN++  N++ S YV  G  ++ L +  EM L+G
Sbjct: 279 VSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNG 338

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +PD + M S + A +QL DL  G+  HG+ +++G+     +C  ++++Y  C     A 
Sbjct: 339 VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQ 398

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            +FD M ++ VV+WNSL +  +  G            P                    ++
Sbjct: 399 TVFDLMPHRNVVTWNSLSSCYVNCG-----------FP--------------------QK 427

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
            + +FR M+   +K D VTM+ +  AC  L  L   K I+ +  ++G+  D+ +  AL+ 
Sbjct: 428 GLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLS 487

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           ++A+C   + A  VF  +  R+V++W   + A       E+ + +F++M R  +K D I 
Sbjct: 488 LYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEIT 547

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
           +  V+  C     + +   +FR M  + G  P
Sbjct: 548 WSVVIGGCVKNSRIEEAMEIFRKMQTM-GFKP 578



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 249/537 (46%), Gaps = 39/537 (7%)

Query: 117 GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE 176
           GL  EAI +Y      GI PDK  F  V  AC  S    +  Q H    + G   DV + 
Sbjct: 19  GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N  I+ YG+C  +   RRVFD++  R+VV+W SL         P++ + +F +M    +K
Sbjct: 79  NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            N +T+  ++  C+ LQ+L+ G  +  ++   GM  +  + +A V+ Y KC  V  A+ +
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F     R++V  N++ S YV  G  ++ L +  EM+L G +PD VT+   +SA + L DL
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDL 258

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G+  HG+ L++G+     + N ++++Y  C     A  +FD M ++ V++WNSL +  
Sbjct: 259 KSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCY 318

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
           +  G  +    VF EM             GL                    +K D + M 
Sbjct: 319 VNCGFPQKGLNVFREM-------------GLNG------------------VKPDPMAMS 347

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            +  AC  L  L   K I+ +  K+G+  D+ + TALV+++A C   + A  VF  M  R
Sbjct: 348 SILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR 407

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           +V  W +        G  ++ + +F EM+  G+KPD +  + +L ACS    +  G  + 
Sbjct: 408 NVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG-KVI 466

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA---LDLIKSMPVEPNDVIWGSLLAA 650
                 HG+   +     ++ L  +   + EA    DLI    V      W  +L A
Sbjct: 467 HGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVAS----WNGILTA 519



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 140/333 (42%), Gaps = 34/333 (10%)

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           GL  EA+ I       G +PD+   ++   A A   D L  +  H    R G+    SI 
Sbjct: 19  GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  I  Y KC      C                          VE AR VF ++  RD +
Sbjct: 79  NAFIHAYGKC-----KC--------------------------VEGARRVFDDLVARDVV 107

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +WN++          ++ + +FR M   ++K + +T+  +   C  L  L   K I+ ++
Sbjct: 108 TWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFV 167

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            ++G+  D+ +++A V+ +A+C   + A  VF  M  RDV  W +        G  ++ +
Sbjct: 168 VRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGL 227

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
            +F EM+  G+KPD +    +L+ACS    +  G          HG+   +     +V+L
Sbjct: 228 NVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG-KAIHGFALKHGMVENVFVSNALVNL 286

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
                 + EA  +   MP   N + W S LA+C
Sbjct: 287 YESCLCVREAQAVFDLMP-HRNVITWNS-LASC 317


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 292/819 (35%), Positives = 455/819 (55%), Gaps = 42/819 (5%)

Query: 29  TPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
            P  +  +  L +CK+   L   ++ H   ++ GL       + ++   A+ G+ E    
Sbjct: 123 APDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEE--- 179

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD   K +  S T+      I GY+  G    A  ++ ++   G++P++ T+  VL
Sbjct: 180 AREVFDKMEKKSVVSWTI-----TIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVL 234

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           NA +  +A   G  VH  I+  G + D  V   L+  Y +CG   D R+VF+++  R+++
Sbjct: 235 NAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLI 294

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           +W ++I   A     +EA  ++ +M  EG+ PN +T V +++AC     L  G  + + +
Sbjct: 295 AWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRV 354

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            + G  ++  + NAL+ MY +CG++  A+ +F +   ++++    ++    + G   EAL
Sbjct: 355 AKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEAL 414

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
            +  EM   G  P+RVT  S ++A +    L  GR  H  V+  GL     + NT+++MY
Sbjct: 415 TVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMY 474

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
             CG                                V+ AR+VF  M  RD +++N M+G
Sbjct: 475 SMCG-------------------------------SVKDARQVFDRMIQRDIVAYNAMIG 503

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
           G    N+ +EA++LF  +  E +K D+VT + + +AC   G+L+ A+ I+  + K G   
Sbjct: 504 GYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFS 563

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D  +  ALV  +A+CG    A  VF +M KR+V +W A IG  A  G G+ A++LF  M 
Sbjct: 564 DTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMK 623

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
            +G+KPD + FV +L+ACSH GL+ +G   F SM+    + P I HYGCMVDLLGRAG L
Sbjct: 624 MEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQL 683

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
            EA  LIK+MP + N  IWG+LL AC+ H NV +A  AAE   +LD + + V+V LS++Y
Sbjct: 684 DEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMY 743

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
           A+AG W + A++R  M+++G+ K PG S I+V  K+H F + D SHP+   I + L  + 
Sbjct: 744 AAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLT 803

Query: 746 CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             ++  GYVPD  +V+ DVDE EK+  + HHSE+LA+A+GLIST     I + KNLR+C 
Sbjct: 804 HAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCP 863

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCH+  K +SK+ DREII RD NRFH F+ G CSC D+W
Sbjct: 864 DCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/552 (25%), Positives = 261/552 (47%), Gaps = 66/552 (11%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS--E 201
           +L  C +      G QVH  I++     D +  N LIN Y +CG I + R+V+ ++S  E
Sbjct: 29  MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYME 88

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R V SW +++    +    ++A+ L  +M + G+ P+  T++  +S+C     LE G  +
Sbjct: 89  RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
                + G+  +  + N +++MY KCG+++ A+++F + + +++V     +  Y   G +
Sbjct: 149 HFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRS 208

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
             A  I  +M   G  P+R+T +S ++A +    L  G+  H  +L  G E   ++   +
Sbjct: 209 ETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTAL 268

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           + MY KCG  +   ++F+ + N+ +++WN++I GL + G  E A EV+++M         
Sbjct: 269 VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQ-------- 320

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                                   E +  +++T V + +AC    AL   K I++ + K 
Sbjct: 321 -----------------------REGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKA 357

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G   D+ +  AL+ M++RCG  + A  VF +M ++DV +WTA IG +A  G G +A+ ++
Sbjct: 358 GFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVY 417

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM------TDIH------------ 603
            EM + G++P+ + +  +L ACS    +  G  + + +      TD H            
Sbjct: 418 QEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMC 477

Query: 604 ------------GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLL 648
                        +   IV Y  M+       L  EAL L   +  E   P+ V + ++L
Sbjct: 478 GSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 537

Query: 649 AACQKHQNVDIA 660
            AC    +++ A
Sbjct: 538 NACANSGSLEWA 549



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 239/511 (46%), Gaps = 67/511 (13%)

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           ++G + NS   + ++  C ++++L  G +V  +I +     +   VNAL++MY++CG+++
Sbjct: 16  QQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIE 75

Query: 292 TAKQLFGECK--DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
            A+Q++ +    +R +   N ++  Y++ G   +AL +L +M  HG  PDR T++S +S+
Sbjct: 76  EARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSS 135

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
               G L  GR  H   ++ GL     + N +++MY KCG  E A  +FD M  K+VVSW
Sbjct: 136 CKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSW 195

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
              I G    G  E+A E+F +M                                 E + 
Sbjct: 196 TITIGGYADCGRSETAFEIFQKME-------------------------------QEGVV 224

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +R+T + V +A     AL   K +++ I   G   D  + TALV M+A+CG  +   QV
Sbjct: 225 PNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQV 284

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F ++  RD+ AW   IG +A  G  E+A E++N+M R+G+ P+ I +V +L AC +   +
Sbjct: 285 FEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAAL 344

Query: 590 NQGWHL--------FRSMTDIHG----------------------VSPQIVHYGCMVDLL 619
           + G  +        F S   +                        V   ++ +  M+  L
Sbjct: 345 HWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGL 404

Query: 620 GRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD-PEKS 675
            ++G   EAL + + M    VEPN V + S+L AC     ++      +++ E      +
Sbjct: 405 AKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDA 464

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
            V   L N+Y+  G   +  +V  +M ++ I
Sbjct: 465 HVGNTLVNMYSMCGSVKDARQVFDRMIQRDI 495


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 278/715 (38%), Positives = 425/715 (59%), Gaps = 39/715 (5%)

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A +LY  +    +  D +T+P ++ AC+   +  E  QVH  ++K+GFD DV+V N LIN
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            +  C ++ D  RVF+E S  + VSW S++         +EA +++ +M E  I      
Sbjct: 257 CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI------ 310

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
                                            +  N+++ ++   G V  A +LF E  
Sbjct: 311 ---------------------------------IASNSMIVLFGMRGLVVEACKLFDEML 337

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           ++++V  + +++ + +  +  EA+     M   G   D V  +SA+SA A L  +  G++
Sbjct: 338 EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKL 397

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H   L+ G E + ++ N +I MY KCG   +A ++FD      ++SWNS+I+G +K   
Sbjct: 398 IHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNL 457

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           V++A+ +F  MP +D +SW++M+ G  Q ++F+E + LF+ M     K D  T+V V SA
Sbjct: 458 VDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISA 517

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  L AL+  KW++AYI++NG+  ++ L T L+DM+ +CG  + A++VF  M ++ +S W
Sbjct: 518 CARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTW 577

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            A I  +AM G  E ++++F+ M +  + P+ I F+GVL AC H GLV++G H F SM  
Sbjct: 578 NALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIH 637

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            H + P + HYGCMVDLLGRAG L EA +L+  MP+ P+   WG+LL AC+KH + ++  
Sbjct: 638 DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGR 697

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
               ++ EL P+  G HVLLSNIYAS GKW +V  +R  M +  + K+PG S IE NG +
Sbjct: 698 RVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVI 757

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           HEF +GD++HP+M+ I  ML EM  +L+  GY PD+  VLLDVDE+EK+  L  HSEKLA
Sbjct: 758 HEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLA 817

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           +AFGLI+ S   PIR++KNLR+C DCH+ AKL+SK + R+I+VRD +RFH F QG
Sbjct: 818 IAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 221/526 (42%), Gaps = 101/526 (19%)

Query: 47  ELKQPHCHILKQGLGHKPSYISKVVCTCAQM--------------GTFESLTYAQKAFDY 92
           E KQ H H+LK G      Y+   +  C  +                 +S+++      Y
Sbjct: 231 EAKQVHNHVLKLGFD-SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGY 289

Query: 93  ----------YIKDNETSATLFMYNSLIRGYSCIGLGVEA-------------------- 122
                     +I       ++   NS+I  +   GL VEA                    
Sbjct: 290 IEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIA 349

Query: 123 -----------ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
                      I  +V +   G++ D+      L+AC        G  +H   +K+G + 
Sbjct: 350 CFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTES 409

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDE-------------------------------MS 200
            + ++N LI  Y +CGDI+  R++FDE                               M 
Sbjct: 410 YINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP 469

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           E++VVSW+S+I   A+ DL  E + LF EM   G KP+  T+V VISACA+L  LE G  
Sbjct: 470 EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKW 529

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V AYI   G+  N ++   L+DMYMKCG V+TA ++F    ++ +   N ++      GL
Sbjct: 530 VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGL 589

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWD 375
              +L +   M      P+ +T +  + A   +G +  G+     M H + ++  ++ + 
Sbjct: 590 VESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHY- 648

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMP- 433
                M+D+  + GK + A  + + M     V +W +L+    K+GD E  R V  ++  
Sbjct: 649 ---GCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE 705

Query: 434 -GRDHISWNTMLGGL-TQENMFEEAMELFRVMLSERI-KVDRVTMV 476
              DH  ++ +L  +   +  +++ +E+  +M   R+ K+   +M+
Sbjct: 706 LQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMI 751



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 187/468 (39%), Gaps = 105/468 (22%)

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
           A  + + P  A  L+  M+   +  ++ T   +I AC+  ++     +V  ++ +LG  +
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +  + N L++ +  C  +  A ++F E    + V  N+I++ Y+ +G   EA  I  +M 
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM- 305

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
                P+R  + S                                 N+MI ++   G   
Sbjct: 306 -----PERSIIAS---------------------------------NSMIVLFGMRGLVV 327

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            AC++FD M  K +V+W++LIA                                  Q  M
Sbjct: 328 EACKLFDEMLEKDMVTWSALIA-------------------------------CFQQNEM 356

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           +EEA+  F  M    + VD V  V   SAC  L  +++ K I++   K G    + L  A
Sbjct: 357 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNA 416

Query: 513 LVDMFARCGD-------------------------------PQRAMQVFRRMEKRDVSAW 541
           L+ M+++CGD                                  A  +F  M ++DV +W
Sbjct: 417 LIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSW 476

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMT 600
           ++ I   A     ++ + LF EM   G KPD    V V++AC+    + QG W    +  
Sbjct: 477 SSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKW--VHAYI 534

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
             +G++  ++    ++D+  + G +  AL++   M +E     W +L+
Sbjct: 535 KRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 41/207 (19%)

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           Q N    A  L++ MLS  +  D  T   +  AC    +   AK ++ ++ K G   D+ 
Sbjct: 190 QTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVY 249

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +   L++ F+ C +   A +VF      D  +W + +      GN E+A  ++++M  + 
Sbjct: 250 VRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERS 309

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
                                                   I+    M+ L G  GL+ EA
Sbjct: 310 ----------------------------------------IIASNSMIVLFGMRGLVVEA 329

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQ 655
             L   M +E + V W +L+A  Q+++
Sbjct: 330 CKLFDEM-LEKDMVTWSALIACFQQNE 355


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 257/650 (39%), Positives = 407/650 (62%), Gaps = 31/650 (4%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F ++ E +  ++  +I     +  P EA+ LF EM E  ++P+  T  C++  C++LQ 
Sbjct: 80  IFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQA 139

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G+++ A I + G  ++  + N L+ MY  CG V+ A+++F E  +RN+   N++ + 
Sbjct: 140 LSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAG 199

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y + G   E + +  EML    R D VT++S ++A  +L DL  G   + YV   GL+G 
Sbjct: 200 YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGN 259

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
            ++  +++DMY KCG+                               V++AR +F +M  
Sbjct: 260 PTLITSLVDMYAKCGQ-------------------------------VDTARRLFDQMDR 288

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           RD ++W+ M+ G +Q +   EA++LF  M    I  + +TMV + S+C  LGAL+  KW+
Sbjct: 289 RDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWV 348

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           + +I+K  +   + L TAL+D +A+CG  + +++VF +M  ++V +WT  I  +A  G G
Sbjct: 349 HFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQG 408

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           ++A+E F  ML + ++P+ + F+GVL+ACSH GLV++G  LF SM+   G+ P+I HYGC
Sbjct: 409 KKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGC 468

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           MVD+LGRAGL+ EA   IK+MP++PN VIW +LLA+C+ H+NV+I   + +++  L+P  
Sbjct: 469 MVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTH 528

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
           SG ++LLSNIYAS G+W +  +VR +MKE+GI+K PG S IE++G +HEF + D  H + 
Sbjct: 529 SGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQS 588

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
             I + + +M  +++ AGYVP+     LD +E +K+  +SHHSEKLA+AFGLI +     
Sbjct: 589 EEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTT 648

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           IR+ KNLR+C DCH+  KLVSKV++REI+VRD  RFH F++GSCSC+D+W
Sbjct: 649 IRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 188/572 (32%), Positives = 303/572 (52%), Gaps = 53/572 (9%)

Query: 1   MALTLNPSPLVLA-TPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQG 59
           MA+TL   PL+ A TPT  T      + +   ++P    L+ CKT+ +L + H H++K  
Sbjct: 1   MAVTL---PLLPAKTPTAKT------SISLFPENPKTLILEQCKTIRDLNEIHAHLIKTR 51

Query: 60  LGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLG 119
           L  KP  +++ +   A +    S+ YA   F   I + ++ A    YN +IRG++     
Sbjct: 52  LLLKPK-VAENLLESAAILLPTSMDYAVSIF-RQIDEPDSPA----YNIMIRGFTLKQSP 105

Query: 120 VEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
            EAI L+ E+    + PD+FTFP +L  C++  A  EG Q+H  I+K GF    FV+N L
Sbjct: 106 HEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTL 165

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           I+ Y  CG++   RRVFDEMSERNV +W S+     +    +E V LF EM+E  I+ + 
Sbjct: 166 IHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDE 225

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           VT+V V++AC +L +LELG+ +  Y++E G+K N  ++ +LVDMY KCG VDTA++LF +
Sbjct: 226 VTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQ 285

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              R++V  + ++S Y +    REAL +  EM      P+ +TM+S +S+ A LG L  G
Sbjct: 286 MDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETG 345

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           +  H ++ +  ++   ++   ++D Y KCG  E +  +F  M  K V+SW  LI GL  N
Sbjct: 346 KWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASN 405

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G             G+                   +A+E F +ML + ++ + VT +GV 
Sbjct: 406 GQ------------GK-------------------KALEYFYLMLEKNVEPNDVTFIGVL 434

Query: 480 SACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRD 537
           SAC + G +D  + ++  + ++ GI   ++    +VD+  R G  + A Q  + M  + +
Sbjct: 435 SACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPN 494

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
              W   + +  +  N    VE+  E L+Q I
Sbjct: 495 AVIWRTLLASCKVHKN----VEIGEESLKQLI 522



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 121/271 (44%), Gaps = 33/271 (12%)

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
           A ++    ++ A  +F ++   D  ++N M+ G T +    EA+ LF+ M    ++ D  
Sbjct: 66  AAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEF 125

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T   +   C  L AL   + I+A I K G      +   L+ M+A CG+ + A +VF  M
Sbjct: 126 TFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEM 185

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH------GG 587
            +R+V  W +        GN E+ V+LF+EML   I+ D +  V VLTAC        G 
Sbjct: 186 SERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGE 245

Query: 588 LVNQ---------GWHLFRSMTDIHGVSPQ---------------IVHYGCMVDLLGRAG 623
            +N+            L  S+ D++    Q               +V +  M+    +A 
Sbjct: 246 WINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQAS 305

Query: 624 LLGEALDLIKSMP---VEPNDVIWGSLLAAC 651
              EALDL   M    ++PN++   S+L++C
Sbjct: 306 RCREALDLFHEMQKANIDPNEITMVSILSSC 336


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 283/750 (37%), Positives = 429/750 (57%), Gaps = 33/750 (4%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D  + + +F++N +I  YS  G   E+I+L+ ++   GI P+ +TF  +L      +   
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           EG QVHG I K+GF+    V N LI+FY     +   +++FDE+++R+V+SW S+I    
Sbjct: 269 EGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYV 328

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY-IDELGMKANA 274
           +  L    + +F +M+  G+  +  TMV V  ACA +  L LG  + +Y I    +    
Sbjct: 329 KNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREV 388

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
              N L+DMY KCG +++A ++F    ++ +V   ++++ YVR GL+  A+ + DEM   
Sbjct: 389 RFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSR 448

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G  PD   + S ++A A  G+L  G++ H Y+  N LE    + N + DMY KCG     
Sbjct: 449 GVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCG----- 503

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                                      ++ A +VFS M  +D ISWNTM+GG T+ ++  
Sbjct: 504 --------------------------SMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPN 537

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           EA+ LF  M  E  K D  T+  +  AC  L ALD  + I+ Y  +NG   D  +  A+V
Sbjct: 538 EALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVV 596

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+ +CG    A  +F  +  +D+ +WT  I    M G G +A+  FN+M   GI+PD +
Sbjct: 597 DMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEV 656

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ +L ACSH GL+++GW +F  M     + P + HY CMVDLL R G L +A   IK+
Sbjct: 657 SFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKA 716

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP++P+  IWG+LL  C+ H +V +A   AERI EL+PE +G +VLL+NIYA A KW  V
Sbjct: 717 MPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEV 776

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
            ++R ++ ++G++K PG S IE+ GK++ F +GD S P+   I  +L+ +  ++++ GY 
Sbjct: 777 QKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYS 836

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           P     LL+ DE+EK+  L  HSEKLAMAFG+++      IRV KNLR+C DCH  AK +
Sbjct: 837 PKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFM 896

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SK   REII+RD++RFH F+ GSCSC  +W
Sbjct: 897 SKSASREIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 257/534 (48%), Gaps = 37/534 (6%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C +  +  +G +V   I   G   D  +   L+  Y +CGD+ +GR VFD++SE  
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +  W  +I   +      E++ LF +M+E GIKPNS T   ++   A +  +E G +V  
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            I +LG  +   +VN+L+  Y     V  A++LF E  DR+++  N+++S YV+ GL   
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMI 382
            + I  +ML+ G   D  TM++   A A +G LL G++ H Y ++   L+      NT++
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY KCG    A R+F+ M  KTVVSW S+I G ++ G  + A ++F EM  R  +    
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVP--- 452

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
                                       D   +  + +AC   G L   K ++ YI +N 
Sbjct: 453 ----------------------------DVYAVTSILNACAINGNLKSGKIVHDYIRENN 484

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
           +  +  ++ AL DM+A+CG  + A  VF  M+K+DV +W   IG         +A+ LF 
Sbjct: 485 LETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFA 544

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           EM R+  KPD      +L AC+    +++G  +       +G S        +VD+  + 
Sbjct: 545 EMQRES-KPDGTTVACILPACASLAALDKGREI-HGYALRNGYSEDKYVTNAVVDMYVKC 602

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKH--QNVDIAAYAAERITELDPEK 674
           GLL  A  L   +P   + V W  ++A    H   +  I  +   R+T ++P++
Sbjct: 603 GLLVLARSLFDMIP-NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDE 655



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 2/140 (1%)

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            + AMEL  +  S+    D      +   C    ++   + + + IE +G+  D  L   
Sbjct: 133 LKNAMEL--LCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVK 190

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           LV M+ +CGD +    VF ++ +  +  W   I   +  GN  +++ LF +ML  GIKP+
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 250

Query: 573 SIVFVGVLTACSHGGLVNQG 592
           S  F  +L   +    V +G
Sbjct: 251 SYTFSSILKCFAAVARVEEG 270


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/819 (35%), Positives = 454/819 (55%), Gaps = 43/819 (5%)

Query: 30  PKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P     I  L  C +  EL   K+ H  I+K G    P   + ++    + G    L  A
Sbjct: 126 PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG---DLPRA 182

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ F        +   +  YN+++  Y+      E + L+ +++  GI PDK T+  +L+
Sbjct: 183 RQVFA-----GISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLD 237

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           A T  S   EG ++H   V+ G + D+ V   L+     CGD+   ++ F  +++R+VV 
Sbjct: 238 AFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVV 297

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           + +LI A A+     EA   ++ M  +G+  N  T + +++AC+  + LE G  + ++I 
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           E G  ++  + NAL+ MY +CG +  A++LF     R+L+  N I++ Y R     EA+ 
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +  +M   G +P RVT L  +SA A       G+M H  +LR+G++    + N +++MY 
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           +CG    A  +F+    + V+SWNS+IAG  ++G  E+A ++F EM              
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQ------------- 524

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                             +E ++ D +T   V S C    AL+L K I+  I ++G+  D
Sbjct: 525 ------------------NEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + L  AL++M+ RCG  Q A  VF  ++ RDV +WTA IG  A +G   +A+ELF +M  
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 567 QGIK-PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
           +G + PD   F  +L+AC+H GLV +G+ +F SM   +GV P I HYGC+V LLGRA   
Sbjct: 627 EGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRF 686

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
            EA  LI  MP  P+  +W +LL AC+ H N+ +A +AA    +L+     V++LLSN+Y
Sbjct: 687 QEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVY 746

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
           A+AG+W +VA++R  M+ +GIRK PG S IEV+  +HEF + D SHPE   I + L+ ++
Sbjct: 747 AAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLS 806

Query: 746 CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             + +AGY PD  +VL D+ +  ++  L  HSE+LA+A+GLI T    PIR+ KNLR+C 
Sbjct: 807 VEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICG 866

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCH+ +K +SK+  REII RD+NRFH F+ G CSC D+W
Sbjct: 867 DCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 186/642 (28%), Positives = 317/642 (49%), Gaps = 47/642 (7%)

Query: 15  PTVTTLTNQHKAKTTPKDSPS-IGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKV 70
           P    ++N H+ + T  D  + +  L+NC   + L E K+ H  +++ G+G    ++S +
Sbjct: 9   PDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVG-PDIFLSNL 67

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           +          S+  A + F    + +  S     +NSLI  Y+  G   +A  L+ E+ 
Sbjct: 68  LIN--MYVKCRSVLDAHQVFKEMPRRDVIS-----WNSLISCYAQQGFKKKAFQLFEEMQ 120

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
             G +P+K T+  +L AC   +    G ++H  I+K G+ RD  V+N L++ YG+CGD+ 
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
             R+VF  +S R+VVS+ +++   A++   KE + LF +M  EGI P+ VT + ++ A  
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
               L+ G R+     E G+ ++  +  ALV M ++CG VD+AKQ F    DR++V+ N 
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNA 300

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++   + G   EA      M   G   +R T LS ++A +    L  G++ H ++  +G
Sbjct: 301 LIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
                 I N +I MY +CG    A  +F  M  + ++SWN++IAG  +  D         
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDR-------- 412

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                                   EAM L++ M SE +K  RVT + + SAC    A   
Sbjct: 413 -----------------------GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            K I+  I ++GI  +  LA AL++M+ RCG    A  VF   + RDV +W + I   A 
Sbjct: 450 GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQ 509

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G+ E A +LF EM  + ++PD+I F  VL+ C +   +  G  +   +T+  G+   + 
Sbjct: 510 HGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE-SGLQLDVN 568

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAAC 651
               ++++  R G L +A ++  S+  +  DV+ W +++  C
Sbjct: 569 LGNALINMYIRCGSLQDARNVFHSL--QHRDVMSWTAMIGGC 608


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/691 (39%), Positives = 422/691 (61%), Gaps = 5/691 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYG--ECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  +++     D +  + L+  Y    C  ++  + VF+++ + N+  W +LI   A 
Sbjct: 90  QIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYAS 149

Query: 217 RDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              P ++  +F  M+    + PN  T   +  A ++L+ L LG  +   + +  + ++  
Sbjct: 150 SSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLF 209

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           ++N+L++ Y   GA D A ++F     +++V  N +++ +   GL  +AL +  EM +  
Sbjct: 210 ILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKD 269

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+ +TM+S +SA A+  DL  GR    Y+  NG      + N M+DMY+KCG    A 
Sbjct: 270 VKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAK 329

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            +F+ MS K +VSW +++ G  K G+ + A  +F  MP +   +WN ++    Q      
Sbjct: 330 DLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRV 389

Query: 456 AMELFRVM-LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           A+ LF  M LS+  K D VT++    A   LGA+D   WI+ YI+K+ I+ +  LAT+L+
Sbjct: 390 ALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLL 449

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+A+CG+  +AM+VF  +E++DV  W+A IGA+AM G G+ A++LF+ ML   IKP+++
Sbjct: 450 DMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAV 509

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F  +L AC+H GLVN+G  LF  M  ++G+ PQI HY C+VD+ GRAGLL +A   I+ 
Sbjct: 510 TFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEK 569

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+ P   +WG+LL AC +H NV++A  A + + EL+P   G  VLLSNIYA AG W  V
Sbjct: 570 MPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKV 629

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           + +R  M++  ++K P  SSI+VNG VHEF  GD SHP    I S L E++ + +  GY 
Sbjct: 630 SNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYK 689

Query: 755 PDLTNVL-LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           PD++N+L L  ++   +  L+ HSEKLA+AFGLIST+ + PIR+VKN+R+C DCH+FAKL
Sbjct: 690 PDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKL 749

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VS++YDR+I++RD  RFH FR G CSC D+W
Sbjct: 750 VSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/586 (29%), Positives = 275/586 (46%), Gaps = 85/586 (14%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +  C    +LKQ H H+L+      P   SK++ T   + +   L YA+  F+   + N 
Sbjct: 79  IDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLL-TAYAISSCSCLIYAKNVFNQIPQPN- 136

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEG 157
               L+ +N+LIRGY+      ++  +++  L      P+KFTFPF+  A ++      G
Sbjct: 137 ----LYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLG 192

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             +HG ++K     D+F+ N LINFYG  G      RVF  M  ++VVSW ++I A A  
Sbjct: 193 SVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALG 252

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            LP +A+ LF EM  + +KPN +TMV V+SACAK  +LE G  +C+YI+  G   + ++ 
Sbjct: 253 GLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILN 312

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM------ 331
           NA++DMY+KCG ++ AK LF +  ++++V   T++  + +LG   EA  I D M      
Sbjct: 313 NAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTA 372

Query: 332 --------------------LLH------GPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
                               L H        +PD VT++ A+ ASAQLG +  G   H Y
Sbjct: 373 AWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVY 432

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           + ++ +     +  +++DMY KCG    A  +F  +  K V  W+++I  L   G  ++ 
Sbjct: 433 IKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKA- 491

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                         A++LF  ML   IK + VT   +  AC + 
Sbjct: 492 ------------------------------ALDLFSSMLEAYIKPNAVTFTNILCACNHA 521

Query: 486 GALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTA 543
           G ++  + ++  +E   GI   +Q    +VD+F R G  ++A     +M     +A W A
Sbjct: 522 GLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGA 581

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
            +GA +  GN E A   +  +L              L  C+HG  V
Sbjct: 582 LLGACSRHGNVELAELAYQNLLE-------------LEPCNHGAFV 614


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 280/722 (38%), Positives = 413/722 (57%), Gaps = 67/722 (9%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  I+K G     F  + LI F      GD+     +F  +   N V W  +I   + 
Sbjct: 46  QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSS 105

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
            + P  A+  +  M+  G +PN  T   +  +C K++    G +V A++ +LG++ NA +
Sbjct: 106 SESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFV 165

Query: 277 VNALVDMYMKCGAV-------------------------------DTAKQLFGECKDRNL 305
             +L++MY + G +                               D A++LF E   R++
Sbjct: 166 HTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDV 225

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD-LLCGRMCHG 364
           V  N ++S Y + G   EA+A  +EM      P+  TMLS +SA AQ G  L  G     
Sbjct: 226 VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           ++   GL     + N +IDMY+KCG                               D+E 
Sbjct: 286 WIEDRGLGSNIRLVNGLIDMYVKCG-------------------------------DLEE 314

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A  +F ++  ++ +SWN M+GG T  + ++EA+ LFR M+   I  + VT + +  AC  
Sbjct: 315 ASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACAN 374

Query: 485 LGALDLAKWIYAYIEKN--GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           LGALDL KW++AY++KN   +   + L T+L+DM+A+CGD   A ++F  M  + ++ W 
Sbjct: 375 LGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWN 434

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           A I   AM G+ + A+ LF+ M  +G  PD I FVGVLTAC H GL++ G   F SM   
Sbjct: 435 AMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQD 494

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           + VSP++ HYGCM+DL GRAGL  EA  L+K+M ++P+  IW SLL AC+ H+ +++A  
Sbjct: 495 YKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAES 554

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
            A+ + EL+PE    +VLLSNIYA AG+W +VA++R ++ +  ++K+PG SSIEV+  VH
Sbjct: 555 VAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVH 614

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           EF  GD+ HP+ N I  ML E++ RL  AG+VPD + VL D+DE+ K+ +LSHHSEKLA+
Sbjct: 615 EFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAI 674

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGLIST     IR++KNLR+C +CHS  KL+SK+++REII RD NRFH F+ GSCSC D
Sbjct: 675 AFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKD 734

Query: 843 FW 844
           +W
Sbjct: 735 YW 736



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 180/578 (31%), Positives = 284/578 (49%), Gaps = 77/578 (13%)

Query: 10  LVLATPTVTTLTNQHKAKTTP----KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPS 65
           +VLA+P  T         + P     D PS+  L NCKTL  LKQ H  I+K GL +   
Sbjct: 2   VVLASPVSTLQVLSFSDPSPPYKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHF 61

Query: 66  YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
            +SK++  CA +     L+YA   F      N       ++N +IRG S       A+  
Sbjct: 62  ALSKLIEFCA-VSPHGDLSYALSLFKTIRNPNHV-----IWNHMIRGLSSSESPFLALEY 115

Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           YV +   G  P+++TFP +  +CTK     EG QVH  ++K+G + + FV   LIN Y +
Sbjct: 116 YVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQ 175

Query: 186 CGDIVDGRRV-------------------------------FDEMSERNVVSWTSLICAC 214
            G++V+ R V                               FDE+  R+VVSW ++I   
Sbjct: 176 NGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGY 235

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL-QNLELGDRVCAYIDELGMKAN 273
           A+    +EA+  F EM    + PN  TM+ V+SACA+   +L+LG+ V ++I++ G+ +N
Sbjct: 236 AQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSN 295

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +VN L+DMY+KCG ++ A  LF + +D+N+V  N ++  Y  +   +EAL +   M+ 
Sbjct: 296 IRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQ 355

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQ 391
               P+ VT LS + A A LG L  G+  H YV +N   ++   ++  ++IDMY KCG  
Sbjct: 356 SNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDL 415

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
            +A RIFD M+ K++ +WN++I+G   +G  ++                           
Sbjct: 416 AVAKRIFDCMNTKSLATWNAMISGFAMHGHTDT--------------------------- 448

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLA 510
               A+ LF  M SE    D +T VGV +AC + G L L  ++  + I+   +   +   
Sbjct: 449 ----ALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHY 504

Query: 511 TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
             ++D+F R G    A  + + ME K D + W + +GA
Sbjct: 505 GCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGA 542



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 210/430 (48%), Gaps = 8/430 (1%)

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM--YMKCGAVDTAKQLFGEC 300
           + ++S C  LQ L+   ++ + I + G+      ++ L++       G +  A  LF   
Sbjct: 32  LTLLSNCKTLQTLK---QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           ++ N V+ N ++           AL     M+  G  P+  T  S   +  ++     G+
Sbjct: 89  RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H +VL+ GLE    +  ++I+MY + G+   A  +FD  S +  VS+ +LI G    G
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
            ++ ARE+F E+P RD +SWN M+ G  Q    EEAM  F  M   ++  +  TM+ V S
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268

Query: 481 ACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           AC   G +L L  W+ ++IE  G+  +++L   L+DM+ +CGD + A  +F +++ ++V 
Sbjct: 269 ACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVV 328

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRS 598
           +W   IG        ++A+ LF  M++  I P+ + F+ +L AC++ G ++ G W     
Sbjct: 329 SWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYV 388

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
             ++  +   +  +  ++D+  + G L  A  +   M  + +   W ++++    H + D
Sbjct: 389 DKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWNAMISGFAMHGHTD 447

Query: 659 IAAYAAERIT 668
            A     R+T
Sbjct: 448 TALGLFSRMT 457


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 291/806 (36%), Positives = 454/806 (56%), Gaps = 46/806 (5%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVV---CTCAQMGTFESLTYAQKAFDYYIKDNET 99
           K+L E K+ H H LK       S + K+     +C Q      +  A++ FD        
Sbjct: 22  KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQ------VVLARRLFD-----EIP 70

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           + ++ ++N +IR Y+  G    AI LY  +   G+ P+K+T+PFVL AC+   A  +GV+
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H      G + DVFV   L++FY +CG +V+ +R+F  MS R+VV+W ++I  C+   L
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             +AV L  +M EEGI PNS T+V V+    + + L  G  +  Y          ++   
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR-P 338
           L+DMY KC  +  A+++F     RN V  + ++  YV     +EAL + D+M+L     P
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDP 310

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
             VT+ S + A A+L DL  GR  H Y+++ G      + NT++ MY KCG         
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGV-------- 362

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                  ++ A   F EM  +D +S++ ++ G  Q      A+ 
Sbjct: 363 -----------------------IDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALS 399

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           +FR+M    I  D  TM+GV  AC +L AL      + Y+   G   D  +  AL+DM++
Sbjct: 400 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A +VF RM++ D+ +W A I    + G G +A+ LF+++L  G+KPD I F+ 
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L++CSH GLV +G   F +M+    + P++ H  CMVD+LGRAGL+ EA   I++MP E
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+  IW +LL+AC+ H+N+++    +++I  L PE +G  VLLSNIY++AG+W + A +R
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
           +  K+ G++K+PG S IE+NG VH F  GD+SH +++ I+  L E+   ++  GY  + +
Sbjct: 640 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 699

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            V  DV+E+EK+ +L +HSEKLA+AFG+++     PI V KNLR+C DCH+  K ++ + 
Sbjct: 700 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLIT 759

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            REI VRD NRFH F+ G+C+C DFW
Sbjct: 760 KREITVRDANRFHHFKNGTCNCGDFW 785


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 301/884 (34%), Positives = 470/884 (53%), Gaps = 89/884 (10%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           L+   +T++       T+P   P I  L+ CKTL   K  H  I   G     SY     
Sbjct: 10  LSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAY 69

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
             C    + E+++  Q+          + +T+F +N+LIR    +GL  + +  Y ++  
Sbjct: 70  IECG--ASAEAVSLLQRLI-------PSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G LPD +TFPFVL AC +  +   G  VH  +   G   +VF+ N ++  YG CG + D
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180

Query: 192 GRRVFDEMSER---NVVSWTSLICACARRDLPKEAVYLFFEMVEE---GIKPNSVTMVCV 245
             ++FDE+ ER   ++VSW S++ A  +    + A+ + F M       ++P+++T+V +
Sbjct: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           + ACA +  L+ G +V  +    G+  +  + NALV MY KC  ++ A ++F   K +++
Sbjct: 241 LPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDV 300

Query: 306 VLCNTIMSNYVRLGL-----------------------------------AREALAILDE 330
           V  N +++ Y ++G                                      EAL +  +
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 360

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE-GWDS------ICNTMID 383
           M L+G  P+ VT+ S +S  A +G LL G+  H YV++N L   W+       + N +ID
Sbjct: 361 MQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLID 420

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KC    +A  IFD +  K                              ++ ++W  M
Sbjct: 421 MYAKCKSYRVARSIFDSIEGKD-----------------------------KNVVTWTVM 451

Query: 444 LGGLTQENMFEEAMELFRVMLSER--IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           +GG  Q     +A++LF  +  ++  +K +  T+     AC  LG L L + ++AY  +N
Sbjct: 452 IGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRN 511

Query: 502 GIHCD-MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
               + + +   L+DM+++ GD   A  VF  M+ R+V +WT+ +    M G GE+A+ L
Sbjct: 512 ENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHL 571

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F++M + G   D I F+ VL ACSH G+V+QG   F  M    G++P   HY CMVDLLG
Sbjct: 572 FDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLG 631

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAG L EA++LIK+M +EP  V+W +LL+A + H N+++  YAA ++TEL  E  G + L
Sbjct: 632 RAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTL 691

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSN+YA+A +W +VAR+R  MK  GIRK PG S I+       F  GD SHPE   I ++
Sbjct: 692 LSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNL 751

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L ++  R++D GYVP  +  L DVD++EK  LL  HSEKLA+A+G+++T+   PIR+ KN
Sbjct: 752 LLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKN 811

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCHS    +S + D EI++RD++RFH F++GSCSC  +W
Sbjct: 812 LRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 293/800 (36%), Positives = 446/800 (55%), Gaps = 40/800 (5%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           K+L + K+ H  I+  G+    +  +K+V      G    L   +K FD  + D      
Sbjct: 108 KSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCG---DLVQGRKIFDKIMNDK----- 159

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F++N L+  Y+ IG   E++SL+ ++   G++ + +TF  VL          E  +VHG
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            ++K+GF  +  V N LI  Y + G +     +FDE+SE +VVSW S+I  C        
Sbjct: 220 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 279

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + +F +M+  G++ +  T+V V+ ACA + NL LG  +  +  +       +  N L+D
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 339

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG ++ A ++F +  D  +V   +I++ YVR GL  +A+ + DEM   G RPD  T
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + S V A A    L  GR  H YV++NG+     + N +I+MY KCG             
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG------------- 446

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                              VE AR VFS++P +D +SWNTM+GG +Q  +  EA+ELF  
Sbjct: 447 ------------------SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLD 488

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           M  ++ K D +TM  V  AC  L ALD  + I+ +I + G   D+ +A ALVDM+A+CG 
Sbjct: 489 M-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGL 547

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              A  +F  + K+D+ +WT  I    M G G +A+  FNEM   GI+PD   F  +L A
Sbjct: 548 LVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNA 607

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CSH GL+N+GW  F SM +  GV P++ HY C+VDLL R G L +A   I+SMP++P+  
Sbjct: 608 CSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTT 667

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           IWG LL+ C+ H +V +A   AE I EL+P+ +  +V+L+N+YA A KW  V ++R +M+
Sbjct: 668 IWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQ 727

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
           ++G ++ PG S IEV GK + F +G+  HP+   I  +L ++  ++++  Y      VL+
Sbjct: 728 KRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLI 787

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           + D+ EK+ +   HSEK AMAFG+++      +RV KN R+C DCH   K +SK    EI
Sbjct: 788 NEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEI 847

Query: 823 IVRDNNRFHFFRQGSCSCSD 842
           ++RD+NRFH F+ G CSC D
Sbjct: 848 VLRDSNRFHHFKDGLCSCRD 867



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 270/547 (49%), Gaps = 48/547 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL  C +  +  +G +VH  I+  G   D  +   L+  Y  CGD+V GR++FD++    
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V  W  L+   A+    +E+V LF +M + G+  N  T  CV+   A L  ++   RV  
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y+ +LG  +N  +VN+L+  Y K G V++A  LF E  + ++V  N++++  V  G +  
Sbjct: 220 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 279

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            L I  +ML+ G   D  T++S + A A +G+L  GR  HG+ ++          NT++D
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 339

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG    A  +F  M + T+VSW S+IA  ++ G                       
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREG----------------------- 376

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
                   ++ +A+ LF  M S+ ++ D  T+  +  AC    +LD  + +++Y+ KNG+
Sbjct: 377 --------LYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGM 428

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             ++ +  AL++M+A+CG  + A  VF ++  +D+ +W   IG  +      +A+ELF +
Sbjct: 429 GSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLD 488

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRS--MTDIHGVSPQIVHYGCMVD 617
           M +Q  KPD I    VL AC+    +++G     H+ R    +D+H           +VD
Sbjct: 489 MQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACA-------LVD 540

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH--QNVDIAAYAAERITELDPEKS 675
           +  + GLL  A  L   +P + + + W  ++A    H   N  I+ +   RI  ++P++S
Sbjct: 541 MYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDES 599

Query: 676 GVHVLLS 682
               +L+
Sbjct: 600 SFSAILN 606



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 45/312 (14%)

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S +   A+   L  G+  H  ++ NG+   +++   ++ MY+ CG      +IFD + N 
Sbjct: 99  SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V  WN L++   K G+                               F E++ LF+ M 
Sbjct: 159 KVFLWNLLMSEYAKIGN-------------------------------FRESVSLFKKMQ 187

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              +  +  T   V      LG +   K ++ Y+ K G   +  +  +L+  + + G  +
Sbjct: 188 KLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVE 247

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A  +F  + + DV +W + I    + G     +E+F +ML  G++ D    V VL AC+
Sbjct: 248 SAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACA 307

Query: 585 HGGLVNQGWHLFRSMTDIHG------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           + G ++ G  L       HG       S ++V    ++D+  + G L  A ++   M  +
Sbjct: 308 NIGNLSLGRAL-------HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG-D 359

Query: 639 PNDVIWGSLLAA 650
              V W S++AA
Sbjct: 360 TTIVSWTSIIAA 371


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 293/800 (36%), Positives = 447/800 (55%), Gaps = 40/800 (5%)

Query: 43   KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
            K+L + K+ H  I+  G+    +  +K+V      G    L   +K FD  + D      
Sbjct: 383  KSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCG---DLVQGRKIFDKIMNDK----- 434

Query: 103  LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            +F++N L+  Y+ IG   E++SL+ ++   G++ + +TF  VL          E  +VHG
Sbjct: 435  VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494

Query: 163  AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             ++K+GF  +  V N LI  Y + G +     +FDE+SE +VVSW S+I  C        
Sbjct: 495  YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554

Query: 223  AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
             + +F +M+  G++ +  T+V V+ A A + NL LG  +  +  +       +  N L+D
Sbjct: 555  GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614

Query: 283  MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            MY KCG ++ A ++F +  D  +V   + ++ YVR GL  +A+ + DEM   G RPD  T
Sbjct: 615  MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674

Query: 343  MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            + S V A A    L  GR  H YV++NG+     + N +I+MY KCG             
Sbjct: 675  VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG------------- 721

Query: 403  NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                               VE AR VFS++P +D +SWNTM+GG +Q ++  EA+ELF  
Sbjct: 722  ------------------SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLD 763

Query: 463  MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
            M  ++ K D +TM  V  AC  L ALD  + I+ +I + G   D+ +A ALVDM+A+CG 
Sbjct: 764  M-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGL 822

Query: 523  PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
               A  +F  + K+D+ +WT  I    M G G +A+  FNEM   GI+PD   F  +L A
Sbjct: 823  LVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNA 882

Query: 583  CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
            CSH GL+N+GW  F SM +  GV P++ HY C+VDLL R G L +A   I+SMP++P+  
Sbjct: 883  CSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTT 942

Query: 643  IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
            IWG LL+ C+ H +V +A   AE I EL+P+ +  +V+L+N+YA A KW  V ++R +M+
Sbjct: 943  IWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQ 1002

Query: 703  EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
            ++G ++ PG S IEV GK + F +G+  HP+   I  +LR++  ++++  Y      VL+
Sbjct: 1003 KRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLI 1062

Query: 763  DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
            + D+ EK+ +   HSEK AMAFG+++      +RV KN R+C DCH   K +SK   REI
Sbjct: 1063 NEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREI 1122

Query: 823  IVRDNNRFHFFRQGSCSCSD 842
            ++RD+NRFH F+ G CSC D
Sbjct: 1123 VLRDSNRFHHFKDGLCSCRD 1142



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 271/547 (49%), Gaps = 48/547 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL  C +  +  +G +VH  I+  G   D  +   L+  Y  CGD+V GR++FD++    
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V  W  L+   A+    +E+V LF +M + G+  N  T  CV+   A L  ++   RV  
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y+ +LG  +N  +VN+L+  Y K G V++A  LF E  + ++V  N++++  V  G +  
Sbjct: 495 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            L I  +ML+ G   D  T++S + A A +G+L  GR  HG+ ++          NT++D
Sbjct: 555 GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG    A  +F  M + T+VSW S IA  ++ G                       
Sbjct: 615 MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREG----------------------- 651

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
                   ++ +A+ LF  M S+ ++ D  T+  +  AC    +LD  + +++Y+ KNG+
Sbjct: 652 --------LYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGM 703

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             ++ +  AL++M+A+CG  + A  VF ++  +D+ +W   IG  +      +A+ELF +
Sbjct: 704 GSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLD 763

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI-----VHYGC-MVD 617
           M +Q  KPD I    VL AC+    +++G        +IHG   +      +H  C +VD
Sbjct: 764 MQKQ-FKPDDITMACVLPACAGLAALDKG-------REIHGHILRRGYFSDLHVACALVD 815

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH--QNVDIAAYAAERITELDPEKS 675
           +  + GLL  A  L   +P + + + W  ++A    H   N  I+ +   RI  ++P++S
Sbjct: 816 MYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDES 874

Query: 676 GVHVLLS 682
              V+L+
Sbjct: 875 SFSVILN 881



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 128/312 (41%), Gaps = 45/312 (14%)

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S +   A+   L  G+  H  ++ NG+   +++   ++ MY+ CG      +IFD + N 
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V  WN L++   K G+                               F E++ LF+ M 
Sbjct: 434 KVFLWNLLMSEYAKIGN-------------------------------FRESVSLFKKMQ 462

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              +  +  T   V      LG +   K ++ Y+ K G   +  +  +L+  + + G  +
Sbjct: 463 KLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVE 522

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A  +F  + + DV +W + I    + G     +E+F +ML  G++ D    V VL A +
Sbjct: 523 SAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWA 582

Query: 585 HGGLVNQGWHLFRSMTDIHG------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           + G ++ G  L       HG       S ++V    ++D+  + G L  A ++   M  +
Sbjct: 583 NIGNLSLGRAL-------HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG-D 634

Query: 639 PNDVIWGSLLAA 650
              V W S +AA
Sbjct: 635 TTIVSWTSTIAA 646


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 295/809 (36%), Positives = 451/809 (55%), Gaps = 42/809 (5%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  + +L   KQ H  ++  G        + +V   A+   F     +++ FD   +
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLD---SKRLFDEIPE 220

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            N  S     +N+L   Y  I    EA+ L+ E+   GI P++F+   ++NACT      
Sbjct: 221 RNVVS-----WNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSS 275

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G  +HG ++K+G+D D F  N L++ Y + GD+ D   VF+++ + ++VSW ++I  C 
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCV 335

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
             +  ++A+ L  +M   GI PN  T+   + ACA +   ELG ++ + + ++ M+++  
Sbjct: 336 LHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLF 395

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +   LVDMY KC  ++ A+  F    +++L+  N I+S Y +     EAL++  EM   G
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
              ++ T+ + + ++A L  +   R  HG  +++G      + N++ID Y KC       
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH----- 510

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                     VE A  +F E    D +S+ +M+    Q    EE
Sbjct: 511 --------------------------VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEE 544

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A++LF  M    +K DR     + +AC  L A +  K ++ +I K G   D+    +LV+
Sbjct: 545 ALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVN 604

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+A+CG    A + F  + +R + +W+A IG +A  G+G QA++LFN+ML++G+ P+ I 
Sbjct: 605 MYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHIT 664

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
            V VL AC+H GLV +    F SM ++ G  P   HY CM+DLLGRAG + EA++L+  M
Sbjct: 665 LVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKM 724

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P E N  +WG+LL A + H++V++   AAE +  L+PEKSG HVLL+NIYASAGKW NVA
Sbjct: 725 PFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVA 784

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
            VR  M++  ++K PG S IEV  KV+ F  GD SH     I + L E++  +  AGYVP
Sbjct: 785 EVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVP 844

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
            +   L DV++ EK+ LL HHSEKLA+AFGLI+T +  PIRV KNLR+C DCH+  K + 
Sbjct: 845 MVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYIC 904

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+  REIIVRD NRFH F+ GSCSC D+W
Sbjct: 905 KIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 206/714 (28%), Positives = 329/714 (46%), Gaps = 83/714 (11%)

Query: 1   MALTLNPSPLVLAT-------PTVTTLTNQ-HKAKTTPKDSPSIGSLKNCKTLNELK--- 49
           + L   P+P ++ T       P  T + N   K   TP        L  C T   L+   
Sbjct: 17  LHLPFKPAPKLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGL 76

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H HI K GL   PS  + ++   ++   F    YA+K     + D  +   L  +++L
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRNF---GYARK-----LVDESSEPDLVSWSAL 128

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           I GY+  GLG  A+  + E+   G+  ++FTF  VL AC+       G QVHG +V  GF
Sbjct: 129 ISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGF 188

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           + DVFV N L+  Y +C + +D +R+FDE+ ERNVVSW +L     + D   EAV LF+E
Sbjct: 189 EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYE 248

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           MV  GIKPN  ++  +++AC  L++   G  +  Y+ +LG   +    NALVDMY K G 
Sbjct: 249 MVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +  A  +F + K  ++V  N +++  V      +AL +L +M   G  P+  T+ SA+ A
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKA 368

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            A +G    GR  H  +++  +E    +   ++DMY KC   E A   F+ +  K +++W
Sbjct: 369 CAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAW 428

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N++I+G             +S+        W  M           EA+ LF  M  E I 
Sbjct: 429 NAIISG-------------YSQY-------WEDM-----------EALSLFVEMHKEGIG 457

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            ++ T+  +  +   L  + + + ++    K+G H D+ +  +L+D + +C   + A ++
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F      D+ ++T+ I A A  G GE+A++LF EM    +KPD  V   +L AC++    
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577

Query: 590 NQGWHLF---------------RSMTDIHG---------------VSPQIVHYGCMVDLL 619
            QG  L                 S+ +++                    IV +  M+  L
Sbjct: 578 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 637

Query: 620 GRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
            + G   +AL L   M    V PN +   S+L AC     V  A    E + EL
Sbjct: 638 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEEL 691


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 296/815 (36%), Positives = 455/815 (55%), Gaps = 46/815 (5%)

Query: 34  PSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           PS+  LK C    +L   KQ H  ++  G        + +V   A+ G F     A+  F
Sbjct: 14  PSV--LKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD---ARSLF 68

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           D  I D     ++  +N+L   Y    +  EA+SL+ ++   GI P++F+   ++N CT 
Sbjct: 69  DA-IPDR----SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
                +G ++HG ++K+G+D D F  N L++ Y + G + D   VFDE+++ ++VSW ++
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I  C   +    A+ L  EM + G+ PN  T+   + ACA +   ELG ++ + + ++ M
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
            +++ +   L+DMY KC ++D A+ +F    +R+++  N ++S + +     EA ++   
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303

Query: 331 MLLHGPRPDRVTMLSAVSASAQL-GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           M   G   ++ T+ + + + A L  + +C R  H   L++G E  + + N++ID Y KCG
Sbjct: 304 MHTEGIGFNQTTLSTVLKSIAALQANYMC-RQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
                                           VE A  VF E P  D + + +++    Q
Sbjct: 363 H-------------------------------VEDATRVFEESPIVDLVLFTSLVTAYAQ 391

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
           +   EEA+ L+  M    IK D      + +AC  L A +  K ++ +I K G   D+  
Sbjct: 392 DGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFA 451

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
             +LV+M+A+CG  + A   F R+  R + +W+A IG +A  G G++A++LF +ML+ G+
Sbjct: 452 GNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGV 511

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
            P+ I  V VL AC+H GLV +  H F SM  + G+ P   HY CM+DLLGRAG L  A+
Sbjct: 512 PPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAM 571

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           +L+  MP + N ++WG+LL A + H+N+D+   AAE +  L+PEKSG HVLL+NIYAS G
Sbjct: 572 ELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVG 631

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
            W  VARVR  MK+  ++K PG S +EV  KV+ F  GD SH     I + L E++  L+
Sbjct: 632 MWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLK 691

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
            AGYVP +   L DV+  EK+ LL HHSEKLA+AFGLI+T    PIRV KNLR+C DCH+
Sbjct: 692 KAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHT 751

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             K +SK+  REIIVRD NRFH FR+GSCSC ++W
Sbjct: 752 VLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 266/555 (47%), Gaps = 66/555 (11%)

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            GI  ++F FP VL ACT +     G QVHG +V  GFD D FV N L+  Y +CG   D
Sbjct: 4   LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R +FD + +R+VVSW +L       D+  EAV LF +MV  GI+PN  ++  +I+ C  
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L++   G ++  Y+ +LG  ++A   NALVDMY K G ++ A  +F E    ++V  N I
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           ++  V       AL +L EM   G  P+  T+ SA+ A A +     GR  H  +++  +
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243

Query: 372 EGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
            G DS     +IDMY KC   + A  +F  M  + +++WN++I+G  +N           
Sbjct: 244 -GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQN----------- 291

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                             +E+  EEA  LF +M +E I  ++ T+  V  +   L A  +
Sbjct: 292 ------------------EED--EEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYM 331

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            + I+A   K+G   D  +  +L+D + +CG  + A +VF      D+  +T+ + A A 
Sbjct: 332 CRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQ 391

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL------FRSMTDIHG 604
           +G GE+A+ L+ EM  +GIKPDS V   +L AC+      QG  +      F  M+DI  
Sbjct: 392 DGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFA 451

Query: 605 VSP------------------------QIVHYGCMVDLLGRAGLLGEALDLIKSM---PV 637
            +                          IV +  M+  L + G   EAL L K M    V
Sbjct: 452 GNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGV 511

Query: 638 EPNDVIWGSLLAACQ 652
            PN +   S+L AC 
Sbjct: 512 PPNHITLVSVLCACN 526



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 33/331 (9%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M L G + +     S + A     DL+ G+  HG V+  G +  + + N+++ +Y KCG 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  +FD + +++VVSWN+L +             V S+M G                
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCY-----------VHSDMHG---------------- 93

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
               EA+ LF  M+   I+ +  ++  + + C  L      + I+ Y+ K G   D   A
Sbjct: 94  ----EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSA 149

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            ALVDM+A+ G  + A  VF  + K D+ +W A I    +     +A+EL  EM + G+ 
Sbjct: 150 NALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMC 209

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           P+       L AC+   L   G  L  S+  +   S   +  G ++D+  +   + +A  
Sbjct: 210 PNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG-LIDMYSKCNSMDDARL 268

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
           + K MP E + + W ++++   +++  + AA
Sbjct: 269 VFKLMP-ERDMIAWNAVISGHSQNEEDEEAA 298


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 285/796 (35%), Positives = 446/796 (56%), Gaps = 41/796 (5%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K  H  +L  G G    YI   +        F  L  A+K F+     +  S     +NS
Sbjct: 135 KSIHDRVLDMGFG-SDLYIGNALID--MYCRFNDLDKARKVFEEMPLRDVVS-----WNS 186

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI GY+  G   EA+ +Y      G++PD +T   VL AC    +  EG  +HG I K+G
Sbjct: 187 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG 246

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
             +DV V N L++ Y +   ++DGRR+FD+M  R+ VSW ++IC  ++  L +E++ LF 
Sbjct: 247 IKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFM 306

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           EMV +  KP+ +T+  ++ AC  L +LE G  V  Y+   G + +    N L++MY KCG
Sbjct: 307 EMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCG 365

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +  ++++F   K ++ V  N++++ Y++ G   EA+ +  +M+    +PD VT +  +S
Sbjct: 366 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLS 424

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
            S QLGDL  G+  H  + + G      + NT++DMY KC                    
Sbjct: 425 MSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC-------------------- 464

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
                      G++  + +VF  M  RD I+WNT++            + +   M +E +
Sbjct: 465 -----------GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGV 513

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             D  TM+ +   C  L A    K I+  I K G+  D+ +   L++M+++CG  + + Q
Sbjct: 514 TPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQ 573

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           VF+ M+ +DV  WTA I A  M G G++AV  F EM   GI PD + FV ++ ACSH GL
Sbjct: 574 VFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGL 633

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V +G + F  M   + + P+I HY C+VDLL R+ LL +A D I SMP++P+  IWG+LL
Sbjct: 634 VEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALL 693

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           +AC+   + +IA   +ERI EL+P+ +G +VL+SNIYA+ GKW  V  +R  +K +G++K
Sbjct: 694 SACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKK 753

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG S +E+  KV+ F +G +   +   ++ +L  +   +   GY+ +L  VL D+DE E
Sbjct: 754 DPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDE 813

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K+ +L  HSE+LA+AFGL++T    P++V+KNLR+C DCH+  K +SK+  RE++VRD N
Sbjct: 814 KRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDAN 873

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F+ G+CSC D+W
Sbjct: 874 RFHVFKDGACSCGDYW 889



 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 178/614 (28%), Positives = 309/614 (50%), Gaps = 42/614 (6%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L +  T  +L + H  I+  GL H   + +K++   A+   F   T +   F    +  
Sbjct: 22  ALASAATTTQLHKLHSLIITLGLHHSVIFSAKLI---AKYAHFRDPTSSFSVF----RLA 74

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
             S  ++++NS+IR  +  GL  EA+SLY E     + PD +TFP V+NAC     F   
Sbjct: 75  SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             +H  ++ MGF  D+++ N LI+ Y    D+   R+VF+EM  R+VVSW SLI      
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
               EA+ +++     G+ P+S TM  V+ AC  L ++E GD +   I+++G+K + ++ 
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N L+ MY K   +   +++F +   R+ V  NT++  Y ++GL  E++ +  EM ++  +
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFK 313

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD +T+ S + A   LGDL  G+  H Y++ +G E   +  N +I+MY KCG    +  +
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F  M  K  VSWNS+I   I+NG                                F+EAM
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGS-------------------------------FDEAM 402

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           +LF++M ++ +K D VT V + S    LG L L K ++  + K G + ++ ++  LVDM+
Sbjct: 403 KLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMY 461

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG+   +++VF  M+ RD+  W   I +     +    + + + M  +G+ PD    +
Sbjct: 462 AKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATML 521

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            +L  CS      QG  +   +  + G+   +     ++++  + G L  +  + K M  
Sbjct: 522 SILPVCSLLAAKRQGKEIHGCIFKL-GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT 580

Query: 638 EPNDVIWGSLLAAC 651
           + + V W +L++AC
Sbjct: 581 K-DVVTWTALISAC 593


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 277/765 (36%), Positives = 437/765 (57%), Gaps = 38/765 (4%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  L  A+K F+     +  S     +NSLI GY+  G   EA+ +Y      G++PD +
Sbjct: 222 FNDLDKARKVFEEMPLRDVVS-----WNSLISGYNANGYWNEALEIYYRFRNLGVVPDSY 276

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   VL AC    +  EG  +HG I K+G  +DV V N L++ Y +   ++DGRR+FD+M
Sbjct: 277 TMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM 336

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             R+ VSW ++IC  ++  L +E++ LF EMV +  KP+ +T+  ++ AC  L +LE G 
Sbjct: 337 VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGK 395

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            V  Y+   G + +    N L++MY KCG +  ++++F   K ++ V  N++++ Y++ G
Sbjct: 396 YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNG 455

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              EA+ +  +M+    +PD VT +  +S S QLGDL  G+  H  + + G      + N
Sbjct: 456 SFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSN 514

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           T++DMY KC                               G++  + +VF  M  RD I+
Sbjct: 515 TLVDMYAKC-------------------------------GEMGDSLKVFENMKARDIIT 543

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           WNT++            + +   M +E +  D  TM+ +   C  L A    K I+  I 
Sbjct: 544 WNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIF 603

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G+  D+ +   L++M+++CG  + + QVF+ M+ +DV  WTA I A  M G G++AV 
Sbjct: 604 KLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVR 663

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            F EM   GI PD + FV ++ ACSH GLV +G + F  M   + + P+I HY C+VDLL
Sbjct: 664 AFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLL 723

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            R+ LL +A D I SMP++P+  IWG+LL+AC+   + +IA   +ERI EL+P+ +G +V
Sbjct: 724 SRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYV 783

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           L+SN+YA+ GKW  V  +R  +K +G++K PG S +E+  KV+ F +G +   +   ++ 
Sbjct: 784 LVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNK 843

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           +L  +   +   GY+ +L  VL D+DE EK+ +L  HSE+LA+AFGL++T    P++V+K
Sbjct: 844 LLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMK 903

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+  K +SK+  RE++VRD NRFH F+ G+CSC D+W
Sbjct: 904 NLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 183/640 (28%), Positives = 316/640 (49%), Gaps = 42/640 (6%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           L +  + TL   H+       S    +L +  T  +L + H  I+  GL H   + +K++
Sbjct: 55  LFSRVMKTLRVLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLI 114

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
              A+   F   T +   F    +    S  ++ +NS+IR  +  GL  EA+SLY E   
Sbjct: 115 ---AKYAHFRDPTSSFSVF----RLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQR 167

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
             + PD +TFP V+NAC     F     +H  ++ MGF  D+++ N LI+ Y    D+  
Sbjct: 168 IRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDK 227

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R+VF+EM  R+VVSW SLI          EA+ +++     G+ P+S TM  V+ AC  
Sbjct: 228 ARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGG 287

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L ++E GD +   I+++G+K + ++ N L+ MY K   +   +++F +   R+ V  NT+
Sbjct: 288 LGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 347

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +  Y ++GL  E++ +  EM ++  +PD +T+ S + A   LGDL  G+  H Y++ +G 
Sbjct: 348 ICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 406

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           E   +  N +I+MY KCG    +  +F  M  K  VSWNS+I   I+NG           
Sbjct: 407 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGS---------- 456

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                                F+EAM+LF++M ++ +K D VT V + S    LG L L 
Sbjct: 457 ---------------------FDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLG 494

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K ++  + K G + ++ ++  LVDM+A+CG+   +++VF  M+ RD+  W   I +    
Sbjct: 495 KELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS 554

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
            +    + + + M  +G+ PD    + +L  CS      QG  +   +  + G+   +  
Sbjct: 555 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL-GLESDVPV 613

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
              ++++  + G L  +  + K M  + + V W +L++AC
Sbjct: 614 GNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISAC 652


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 284/736 (38%), Positives = 416/736 (56%), Gaps = 32/736 (4%)

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +++GY+       A+S +  +    + P  + F ++L  C  +S    G ++HG+++  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           F  ++F    ++N Y +C  I D   +FD M ER++V W ++I   A+    K A+ L  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M EEG +P+S+T+V ++ A A  + L +G  V  Y+   G ++   +  ALVDMY KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +V  A+ +F     R +V  N+++  YV+ G A  A+ I  +ML  G +P  VT++ A+ 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A A LGDL  G+  H  V +  L+   S+ N++I MY KC +                  
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKR------------------ 282

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
                        V+ A ++F  +  +  +SWN M+ G  Q     EA+  F  M S  I
Sbjct: 283 -------------VDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI 329

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           K D  TMV V  A   L     AKWI+  + +  +  ++ + TALVDM+A+CG    A +
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F  M  R V  W A I      G G+ +VELF EM +  IKP+ I F+  L+ACSH GL
Sbjct: 390 LFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGL 449

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V +G   F SM   +G+ P + HYG MVDLLGRAG L +A D I+ MP++P   ++G++L
Sbjct: 450 VEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAML 509

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
            AC+ H+NVD+   AA  I +L+P+  G HVLL+NIYA+A  W  VA+VR  M++ G++K
Sbjct: 510 GACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQK 569

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG S +E+  +VH F SG  SHP+   I S L  +   +R AGYVPD TN + DV++  
Sbjct: 570 TPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPD-TNSIHDVEDDV 628

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K  LL+ HSEKLA+AFGL++TS   PI + KNLR+C DCH+  K +S V  REIIVRD +
Sbjct: 629 KVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 688

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F+ G CSC D+W
Sbjct: 689 RFHLFKDGVCSCGDYW 704



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 237/476 (49%), Gaps = 37/476 (7%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           Y + D      L  +N++I GY+  G    A+ L + ++  G  PD  T   +L A   +
Sbjct: 85  YNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADT 144

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
                G+ VHG +++ GF+  V V   L++ Y +CG +   R +FD M  R VVSW S+I
Sbjct: 145 RLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMI 204

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
               +    + A+ +F +M++EG++P +VT++  + ACA L +LE G  V   +D+L + 
Sbjct: 205 DGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLD 264

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           ++  ++N+L+ MY KC  VD A  +F   +++ LV  N ++  Y + G   EAL    EM
Sbjct: 265 SDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEM 324

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
                +PD  TM+S + A A+L      +  HG V+R  L+    +   ++DMY KCG  
Sbjct: 325 QSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAI 384

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             A ++FD M+ + V++WN++I G   +G                       LG      
Sbjct: 385 HTARKLFDMMNARHVITWNAMIDGYGTHG-----------------------LG------ 415

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLA 510
             + ++ELF+ M    IK + +T +   SAC + G ++     +  ++K+ GI   M   
Sbjct: 416 --KTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHY 473

Query: 511 TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAV-ELF 561
            A+VD+  R G   +A    ++M  K  ++ + A +GA  +  N   GE+A  E+F
Sbjct: 474 GAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIF 529


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 290/806 (35%), Positives = 453/806 (56%), Gaps = 46/806 (5%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVV---CTCAQMGTFESLTYAQKAFDYYIKDNET 99
           K+L E K+ H H LK       S + K+     +C Q      +  A++ FD        
Sbjct: 22  KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQ------VVLARRLFD-----EIP 70

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           + ++ ++N +IR Y+  G    AI LY  +   G+ P+K+T+PFVL AC+   A  +GV+
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H      G + DVFV   L++FY +CG +V+ +R+F  MS R+VV+W ++I  C+   L
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             +AV L  +M EEGI PNS T+V V+    + + L  G  +  Y          ++   
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR-P 338
           L+DMY KC  +  A+++F     RN V  + ++  YV     +EAL + D+M+L     P
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDP 310

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
             VT+ S + A A+L DL  GR  H Y+++ G      + NT++ MY KCG         
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGV-------- 362

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                  ++ A   F  M  +D +S++ ++ G  Q      A+ 
Sbjct: 363 -----------------------IDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALS 399

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           +FR+M    I  D  TM+GV  AC +L AL      + Y+   G   D  +  AL+DM++
Sbjct: 400 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A +VF RM++ D+ +W A I    + G G +A+ LF+++L  G+KPD I F+ 
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L++CSH GLV +G   F +M+    + P++ H  CMVD+LGRAGL+ EA   I++MP E
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+  IW +LL+AC+ H+N+++    +++I  L PE +G  VLLSNIY++AG+W + A +R
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
           +  K+ G++K+PG S IE+NG VH F  GD+SH +++ I+  L E+   ++  GY  + +
Sbjct: 640 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 699

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            V  DV+E+EK+ +L +HSEKLA+AFG+++     PI V KNLR+C DCH+  K ++ + 
Sbjct: 700 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVIT 759

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            REI VRD NRFH F+ G+C+C DFW
Sbjct: 760 KREITVRDANRFHHFKNGTCNCGDFW 785


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 279/793 (35%), Positives = 443/793 (55%), Gaps = 39/793 (4%)

Query: 52   HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
            H HI + G        + ++   A+ G    L  A++ F+   K +     L  +N++I 
Sbjct: 408  HSHISEVGHSSDVQIGNSLISMYARCG---DLPRARELFNTMPKRD-----LISWNAIIA 459

Query: 112  GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
            GY+      EA+ LY ++   G+ P + TF  +L+ACT SSA+ +G  +H  I++ G   
Sbjct: 460  GYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKS 519

Query: 172  DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
            +  + N L+N Y  CG I++ + VF+    R+++SW S+I   A+    + A  LF EM 
Sbjct: 520  NGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMK 579

Query: 232  EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            +EG++P+ +T   V+  C   + LELG ++   I E G++ +  + NAL++MY++CG++ 
Sbjct: 580  KEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQ 639

Query: 292  TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
             A ++F   + RN++    ++  +   G  R+A  +  +M   G +P + T  S + A  
Sbjct: 640  DAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACM 699

Query: 352  QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
                L  G+    ++L +G E    + N +I  Y K                        
Sbjct: 700  SSACLDEGKKVIAHILNSGYELDTGVGNALISAYSK------------------------ 735

Query: 412  LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
                   +G +  AR+VF +MP RD +SWN M+ G  Q  +   A++    M  + + ++
Sbjct: 736  -------SGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLN 788

Query: 472  RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
            + + V + +AC    AL+  K ++A I K  +  D+++  AL+ M+A+CG  + A +VF 
Sbjct: 789  KFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFD 848

Query: 532  RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
               +++V  W A I A A  G   +A++ FN M ++GIKPD   F  +L+AC+H GLV +
Sbjct: 849  NFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVME 908

Query: 592  GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
            G  +F S+   HG+SP I HYGC+V LLGRAG   EA  LI  MP  P+  +W +LL AC
Sbjct: 909  GNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGAC 968

Query: 652  QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
            + H NV +A +AA    +L+     V+VLLSN+YA+AG+W +VA++R  M+ +GIRK PG
Sbjct: 969  RIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 1028

Query: 712  SSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
             S IEV+  +HEF + D SHPE   I   L+ ++  +  AGY PD   VL ++D++ ++ 
Sbjct: 1029 RSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQET 1088

Query: 772  LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
             L  HSE+LA+A+GL+ T    PIR+ KNLR+C DCH+ +K +SK+  REII RD+NRFH
Sbjct: 1089 SLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFH 1148

Query: 832  FFRQGSCSCSDFW 844
             F+ G CSC DFW
Sbjct: 1149 TFKNGKCSCEDFW 1161



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 173/630 (27%), Positives = 304/630 (48%), Gaps = 56/630 (8%)

Query: 30  PKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P     I  L  C +  EL   K+ H  I++ G    P   + ++      G  E L  A
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLL---NMYGKCEDLPSA 237

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ F    + +  S     YN+++  Y+      E I L+ +++  GI PDK T+  +L+
Sbjct: 238 RQVFSGIYRRDVVS-----YNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLD 292

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           A T  S   EG ++H   V  G + D+ V   L   +  CGD+   ++  +  ++R+VV 
Sbjct: 293 AFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVV 352

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           + +LI A A+    +EA   +++M  +G+  N  T + V++AC+  + L  G+ + ++I 
Sbjct: 353 YNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           E+G  ++  + N+L+ MY +CG +  A++LF     R+L+  N I++ Y R     EA+ 
Sbjct: 413 EVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMK 472

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +  +M   G +P RVT L  +SA         G+M H  +LR+G++    + N +++MY 
Sbjct: 473 LYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYR 532

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           +CG    A  +F+    + ++SWNS+IAG  ++G  E+A ++F EM              
Sbjct: 533 RCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMK------------- 579

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                              E ++ D++T   V   C    AL+L + I+  I ++G+  D
Sbjct: 580 ------------------KEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLD 621

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + L  AL++M+ RCG  Q A +VF  +  R+V +WTA IG  A +G   +A ELF +M  
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN 681

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRSMTDIH-GVSPQIVHYGCMVDLLGR 621
            G KP    F  +L AC     +++G     H+  S  ++  GV         ++    +
Sbjct: 682 DGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVG------NALISAYSK 735

Query: 622 AGLLGEALDLIKSMPVEPNDVI-WGSLLAA 650
           +G + +A  +   MP    D++ W  ++A 
Sbjct: 736 SGSMTDARKVFDKMP--NRDIMSWNKMIAG 763



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 200/731 (27%), Positives = 336/731 (45%), Gaps = 89/731 (12%)

Query: 20  LTNQHKAKTTPKDSPS-IGSLKNC---KTLNELKQPHCHILKQGLGHK---PSYISKVVC 72
           L+N ++ + T  +  + +  ++NC   ++L E K+ H  +++ G+G      + +  +  
Sbjct: 69  LSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYV 128

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
            C       S++ A + F    + +  S     +NSLI  Y+  G   +A  L+ E+   
Sbjct: 129 KC------RSVSDAHQVFLKMPRRDVIS-----WNSLISCYAQQGFKKKAFQLFEEMQTA 177

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G +P K T+  +L AC   +    G ++H  I++ G+ RD  V+N L+N YG+C D+   
Sbjct: 178 GFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSA 237

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R+VF  +  R+VVS+ +++   A++   +E + LF +M  EGI P+ VT + ++ A    
Sbjct: 238 RQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTP 297

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             L+ G R+       G+ ++  +  AL  M+++CG V  AKQ      DR++V+ N ++
Sbjct: 298 SMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALI 357

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           +   + G   EA     +M   G   +R T LS ++A +    L  G + H ++   G  
Sbjct: 358 AALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHS 417

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               I N++I MY +CG    A  +F+ M  + ++SWN++IAG  +  D           
Sbjct: 418 SDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDR---------- 467

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                                 EAM+L++ M SE +K  RVT + + SAC    A    K
Sbjct: 468 ---------------------GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I+  I ++GI  +  LA AL++M+ RCG    A  VF     RD+ +W + I   A  G
Sbjct: 507 MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH----------------GGL---VNQGW 593
           + E A +LF EM ++G++PD I F  VL  C +                 GL   VN G 
Sbjct: 567 SYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGN 626

Query: 594 HLFR------SMTDIHGVSPQIVHYGCM--VDLLGRAGLLGE---ALDLIKSMP---VEP 639
            L        S+ D + V   + H   M    ++G     GE   A +L   M     +P
Sbjct: 627 ALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKP 686

Query: 640 NDVIWGSLLAACQKHQNVD----IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
               + S+L AC     +D    + A+      ELD   +GV   L + Y+ +G  T+  
Sbjct: 687 VKSTFSSILKACMSSACLDEGKKVIAHILNSGYELD---TGVGNALISAYSKSGSMTDAR 743

Query: 696 RVRLQMKEQGI 706
           +V  +M  + I
Sbjct: 744 KVFDKMPNRDI 754



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/640 (26%), Positives = 293/640 (45%), Gaps = 53/640 (8%)

Query: 15  PTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           P   T  N   A TTP              L+E K+ H   + +GL       + +    
Sbjct: 282 PDKVTYINLLDAFTTPS------------MLDEGKRIHKLAVNEGLNSDIRVGTALATMF 329

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
            + G       A +AF            + +YN+LI   +  G   EA   Y ++   G+
Sbjct: 330 VRCGDVAGAKQALEAF--------ADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGV 381

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           + ++ T+  VLNAC+ S A G G  +H  I ++G   DV + N LI+ Y  CGD+   R 
Sbjct: 382 VMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARE 441

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F+ M +R+++SW ++I   ARR+   EA+ L+ +M  EG+KP  VT + ++SAC     
Sbjct: 442 LFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSA 501

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
              G  +   I   G+K+N  + NAL++MY +CG++  A+ +F   + R+++  N++++ 
Sbjct: 502 YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAG 561

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           + + G    A  +  EM   G  PD++T  S +        L  GR  H  ++ +GL+  
Sbjct: 562 HAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLD 621

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
            ++ N +I+MY++CG  + A  +F  + ++ V+SW ++I G    G+             
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGED------------ 669

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
                               +A ELF  M ++  K  + T   +  AC     LD  K +
Sbjct: 670 -------------------RKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKV 710

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
            A+I  +G   D  +  AL+  +++ G    A +VF +M  RD+ +W   I   A  G G
Sbjct: 711 IAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLG 770

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
             A++   +M  QG+  +   FV +L ACS    + +G  +   +     +   +     
Sbjct: 771 GTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVK-RKMQGDVRVGAA 829

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           ++ +  + G L EA ++  +   E N V W +++ A  +H
Sbjct: 830 LISMYAKCGSLEEAQEVFDNF-TEKNVVTWNAMINAYAQH 868


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 294/745 (39%), Positives = 424/745 (56%), Gaps = 60/745 (8%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           YN LI  Y+   L   + + Y+ + +      D F  P +L AC ++S+   G ++HG  
Sbjct: 55  YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            K GF  DVFV N L+N Y +CG +V  R VFD+M ER+VVSWT+++    R     EA+
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEAL 174

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-----DELGMKANALMVNA 279
            L  EM   G+K + V ++ +I+    L +++ G  V  YI     DE   K    M  A
Sbjct: 175 RLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDE---KMEVSMTTA 231

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+DMY K G + +A++LF     R++V    +++  +R     E     + ML     P+
Sbjct: 232 LIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPN 291

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            +T+LS ++    +G L  G+  H Y+LRNG     ++   +IDMY KCG+   A  +F+
Sbjct: 292 EITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFN 351

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            +  K V  W+ LI+                      H+S              ++   L
Sbjct: 352 GVKKKDVKIWSVLISAYA-------------------HVS------------CMDQVFNL 380

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  ML+  +K + VTMV + S C   GALDL KW +AYI ++G+  D+ L TAL++M+A+
Sbjct: 381 FVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAK 440

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CGD   A  +F    +RD+  W   +   +M G G++A+ELF+EM   G++P+ I FV +
Sbjct: 441 CGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSI 500

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
             ACSH GL+                     HYGC+VDLLGRAG L EA ++I++MP+ P
Sbjct: 501 FHACSHSGLME--------------------HYGCLVDLLGRAGHLDEAHNIIENMPMRP 540

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
           N +IWG+LLAAC+ H+N+ +   AA +I ELDP+  G  VL SNIYASA +W +V  VR 
Sbjct: 541 NTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVRE 600

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            M   G++K PG S IEV+G VH F SGD++  +   +  M+ EM  +LR++GY P+   
Sbjct: 601 AMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAA 660

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           VLL++DE+EK+  LS+HSEKLA AFGLIST+   PIR+VKNLR+C DCH+  KL+SK+Y 
Sbjct: 661 VLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYG 720

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           R IIVRD NRFH F +G CSC  +W
Sbjct: 721 RTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 222/514 (43%), Gaps = 85/514 (16%)

Query: 58  QGLGHKPSYISKVVCTCAQMGTFES---LTYAQKAFDYYIKDNETSATLFM--------- 105
            G   K  + S V    A M  +E    L  A+  FD   + +  S T  +         
Sbjct: 111 HGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAF 170

Query: 106 --YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
                L+R    +G+ +  ++L   +A FG L D                   G  VHG 
Sbjct: 171 GEALRLVREMQFVGVKLSGVALISLIAVFGNLLD----------------MKSGRAVHGY 214

Query: 164 IVKMGFDR--DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           IV+   D   +V +   LI+ Y + G +   +R+FD +S+R+VVSWT +I  C R     
Sbjct: 215 IVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLD 274

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           E    F  M+EE + PN +T++ +I+ C  +  L+LG    AY+   G   +  +V AL+
Sbjct: 275 EGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALI 334

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY KCG V  A+ LF   K +++ + + ++S Y  +    +   +  EML +  +P+ V
Sbjct: 335 DMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNV 394

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDH 400
           TM+S +S  A+ G L  G+  H Y+ R+GLE  D I  T +I+MY KCG   +A  +F+ 
Sbjct: 395 TMVSLLSLCAEAGALDLGKWTHAYINRHGLE-VDVILETALINMYAKCGDVTIARSLFNE 453

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
              + +  WN+++AG   +G  + A E+FSEM                            
Sbjct: 454 AMQRDIRMWNTMMAGFSMHGCGKEALELFSEME--------------------------- 486

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
               S  ++ + +T V +  AC + G                    M+    LVD+  R 
Sbjct: 487 ----SHGVEPNDITFVSIFHACSHSGL-------------------MEHYGCLVDLLGRA 523

Query: 521 GDPQRAMQVFRRMEKR-DVSAWTAAIGAMAMEGN 553
           G    A  +   M  R +   W A + A  +  N
Sbjct: 524 GHLDEAHNIIENMPMRPNTIIWGALLAACKLHKN 557



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 179/381 (46%), Gaps = 30/381 (7%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSC-IGLGVEAISLYVELAGFGILPDKFTF 141
           L  AQ+ FD   K +  S T+ M    IR  SC +  G +  +  +E   F   P++ T 
Sbjct: 242 LASAQRLFDRLSKRSVVSWTV-MIAGCIR--SCRLDEGAKNFNRMLEEKLF---PNEITL 295

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             ++  C        G   H  +++ GF   + +   LI+ YG+CG +   R +F+ + +
Sbjct: 296 LSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKK 355

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           ++V  W+ LI A A      +   LF EM+   +KPN+VTMV ++S CA+   L+LG   
Sbjct: 356 KDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWT 415

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            AYI+  G++ + ++  AL++MY KCG V  A+ LF E   R++ + NT+M+ +   G  
Sbjct: 416 HAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCG 475

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLG---------DLLCGRMCHGYVLRNGLE 372
           +EAL +  EM  HG  P+ +T +S   A +  G         DLL GR  H     N +E
Sbjct: 476 KEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEHYGCLVDLL-GRAGHLDEAHNIIE 534

Query: 373 GWDSICNTMI--------DMYMKCGKQEMACRI---FDHMSNKTVVSWNSLIAGLIKNGD 421
                 NT+I         ++      E+A R     D  +    V  +++ A   +  D
Sbjct: 535 NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 594

Query: 422 VESAREVFSE--MPGRDHISW 440
           V S RE  S   M     +SW
Sbjct: 595 VTSVREAMSHSGMKKEPGLSW 615


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 293/809 (36%), Positives = 463/809 (57%), Gaps = 45/809 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
            ++C  +N  KQ H  +L  G       ++++V   A +G    L+ +   F +  + N 
Sbjct: 58  FRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLG---DLSLSSTTFKHIQRKN- 113

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF-GILPDKFTFPFVLNACTKSSAFGEG 157
               +F +NS++  Y   G   +++    EL    G+ PD +TFP VL AC    +  +G
Sbjct: 114 ----IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADG 166

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
            ++H  ++KMGF+ DV+V   LI+ Y   G +    +VF +M  R+V SW ++I    + 
Sbjct: 167 EKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQN 226

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
               EA+ +   M  E +K ++VT+  ++  CA+  ++  G  V  Y+ + G++++  + 
Sbjct: 227 GNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVS 286

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           NAL++MY K G +  A+++F   + R+LV  N+I++ Y +      AL    EML  G R
Sbjct: 287 NALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMR 346

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACR 396
           PD +T++S  S   QL D   GR  HG+V+R   LE    I N +++MY K G       
Sbjct: 347 PDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGS------ 400

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    ++ AR VF ++P RD ISWNT++ G  Q  +  EA
Sbjct: 401 -------------------------IDCARAVFEQLPSRDVISWNTLITGYAQNGLASEA 435

Query: 457 MELFRVMLSERIKV-DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           ++ + +M   R  V ++ T V +  A  ++GAL     I+  + KN +  D+ +AT L+D
Sbjct: 436 IDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLID 495

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ +CG  + AM +F  + +     W A I ++ + G+GE+A++LF +M   G+K D I 
Sbjct: 496 MYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHIT 555

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FV +L+ACSH GLV++    F +M   + + P + HYGCMVDL GRAG L +A +L+ +M
Sbjct: 556 FVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNM 615

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P++ +  IWG+LLAAC+ H N ++  +A++R+ E+D E  G +VLLSNIYA+ GKW    
Sbjct: 616 PIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAV 675

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           +VR   +++G+RK PG SS+ V   V  F +G++SHP+   I   LR +N +++  GYVP
Sbjct: 676 KVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVP 735

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           D + VL DV+E EK+ +L+ HSE+LA+ FG+IST    PIR+ KNLR+C DCH+  K +S
Sbjct: 736 DYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYIS 795

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+ +REIIVRD+NRFH F+ G CSC D+W
Sbjct: 796 KITEREIIVRDSNRFHHFKDGICSCGDYW 824


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/686 (39%), Positives = 408/686 (59%), Gaps = 31/686 (4%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +H A++++G D D ++ N ++ F    G+     R+ D+  E N+  + ++I      D
Sbjct: 28  HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLND 87

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             +E++ ++  M +EG+ P+S T   V+ ACA++ + ELG ++ + + + G +A+A +  
Sbjct: 88  CFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKI 147

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L+++Y KCG +D A ++F +  D+N       +S YV +G  REA+ +   +L  G RP
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D  +++  +SA  + GDL  G     Y+  NG+     +   ++D Y KCG         
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCG--------- 258

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                 ++E AR VF  M  ++ +SW++M+ G     + +EA++
Sbjct: 259 ----------------------NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALD 296

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF  ML+E +K D   MVGV  +C  LGAL+L  W    I  N    +  L TAL+DM+A
Sbjct: 297 LFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYA 356

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG   RA +VFR M K+D   W AAI  +AM G+ + A+ LF +M + GIKPD   FVG
Sbjct: 357 KCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVG 416

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L AC+H GLV +G   F SM  +  ++P+I HYGCMVDLLGRAG L EA  LIKSMP+E
Sbjct: 417 LLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPME 476

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
            N ++WG+LL  C+ H++  +     +++  L+P  SG +VLLSNIYA++ KW   A++R
Sbjct: 477 ANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIR 536

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
             M E+G++K+PG S IEV+G VH+F  GD SHP    I + L E+   L+ AGYVP   
Sbjct: 537 SIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTD 596

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
           +VL D++E+EK++ +  HSEKLA+AFGLIST+    I VVKNLR+C DCH   K +S++ 
Sbjct: 597 HVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIA 656

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            REIIVRDNNRFH F  G CSC D+W
Sbjct: 657 GREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 248/512 (48%), Gaps = 55/512 (10%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L  LK  H  +L+ GL      ++KV+          S  +    + + I D      +F
Sbjct: 23  LKHLKHIHAALLRLGLDEDTYLLNKVLRF--------SFNFGNTNYSFRILDQTKEPNIF 74

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           ++N++IRG        E+I +Y  +   G+ PD FTFPFVL AC +      GV++H  +
Sbjct: 75  LFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV 134

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           VK G + D FV+  LIN Y +CG I +  +VFD++ ++N  SWT+ I         +EA+
Sbjct: 135 VKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAI 194

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            +F  ++E G++P+S ++V V+SAC +  +L  G+ +  YI E GM  N  +  ALVD Y
Sbjct: 195 DMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFY 254

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KCG ++ A+ +F    ++N+V  ++++  Y   GL +EAL +  +ML  G +PD   M+
Sbjct: 255 GKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMV 314

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS--ICNTMIDMYMKCGKQEMACRIFDHMS 402
             + + A+LG L  G      +  NG E  D+  +   +IDMY KCG+ + A  +F  M 
Sbjct: 315 GVLCSCARLGALELGDWASNLI--NGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR 372

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K  V WN+ I+GL  +G V                               ++A+ LF  
Sbjct: 373 KKDRVVWNAAISGLAMSGHV-------------------------------KDALGLFGQ 401

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA------LVDM 516
           M    IK DR T VG+  AC + G ++  +  +     N + C   L         +VD+
Sbjct: 402 MEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYF-----NSMECVFTLTPEIEHYGCMVDL 456

Query: 517 FARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
             R G    A Q+ + M  + +   W A +G 
Sbjct: 457 LGRAGCLDEAHQLIKSMPMEANAIVWGALLGG 488



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/170 (18%), Positives = 73/170 (42%), Gaps = 24/170 (14%)

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K I+A + + G+  D  L   ++      G+   + ++  + ++ ++  +   I  + + 
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ--I 609
              ++++E+++ M ++G+ PDS  F  VL AC+            R +    GV     +
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACA------------RVLDSELGVKMHSLV 134

Query: 610 VHYGC---------MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           V  GC         +++L  + G +  A  +   +P + N   W + ++ 
Sbjct: 135 VKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIP-DKNFASWTATISG 183


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/701 (38%), Positives = 424/701 (60%), Gaps = 8/701 (1%)

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTS 209
           ++F +  Q+H  +++     D +  + L     +     +   R+VFD++ + N+ SW  
Sbjct: 150 TSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNI 209

Query: 210 LICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           LI A A    P ++V +F  M+ +    PN  T   +I A A+ +   +G  V     + 
Sbjct: 210 LIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKT 269

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNTIMSNYVRLGLAREALA 326
               +  ++N+L+  Y  CG +D A  +F   E  ++++V  N++++ +V+ G   +AL 
Sbjct: 270 SFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALD 329

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           + + M   G  P+ VTM+S +SA A+  +L  GR    Y+ RN +    ++CN  IDM++
Sbjct: 330 LFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFV 389

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG+ E+A  +FD+M  + VVSW ++I G  K  +   AR++F  MP +D  +WN ++ G
Sbjct: 390 KCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISG 449

Query: 447 LTQENMFEEAMELFRVMLSER--IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
             Q    +EA+ +FR +   +   + D+VT++   SAC  LGA+D+ +WI+ YI+K  I 
Sbjct: 450 YEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQ 509

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            +  LAT+L+DM+++ GD ++A++VF  +  +DV  W+A I  +AM G GE A+ELF +M
Sbjct: 510 LNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDM 569

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
               +KP+S+ F  +L ACSH GLV++G  LF  M  ++GV P+  HY CMVD+LGRAG 
Sbjct: 570 QETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGH 629

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EAL  I+ MP+ P+  +WG+LL AC  H N+++A  A  R+ E++P   G +VLLSN+
Sbjct: 630 LEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNL 689

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YA  G W  V+ +R QM++ G++K  G SSIE++G VHEF  GD +HP   +I + L E+
Sbjct: 690 YAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEI 749

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
             RLR  GYV +   +L  V+E+E K+  L  HSEK+A+AFGLI       IR+VKNLR+
Sbjct: 750 MARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRV 809

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH+ AK+VSKVY R+I++RD  RFH F  G CSC D+W
Sbjct: 810 CRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 186/573 (32%), Positives = 286/573 (49%), Gaps = 81/573 (14%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
            + C +  +LKQ H  +L+    H P Y +  + T A   +F +L YA+K FD   + N 
Sbjct: 146 FQQCTSFKQLKQIHAQMLRTNKLHDP-YAASELFTAAAFSSFSALDYARKVFDQIPQPN- 203

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVEL---AGFGILPDKFTFPFVLNACTKSSAFG 155
               L+ +N LIR  +     ++++ +++ +   + FG  P+KFTFP ++ A  +   F 
Sbjct: 204 ----LYSWNILIRALATSSDPIQSVLVFIRMLHDSPFG--PNKFTFPVLIKAVAERRCFL 257

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD--EMSERNVVSWTSLICA 213
            G  VHG  +K  F  DVFV N LI+FY  CG +     VF+  E + +++VSW S++  
Sbjct: 258 VGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTG 317

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             +   P +A+ LF  M  EG+ PN+VTMV V+SACAK  NL LG +VC YID   M  N
Sbjct: 318 FVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN 377

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL---GLAR-------- 322
             + NA +DM++KCG V+ A+ LF   + R++V   TI+  Y ++   G+AR        
Sbjct: 378 LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR 437

Query: 323 --------------------EALAILDEMLL--HGPRPDRVTMLSAVSASAQLGDLLCGR 360
                               EALAI  E+ L   G RPD+VT+LS +SA AQLG +  G 
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE 497

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             HGY+ +  ++   ++  ++IDMY K G  E A  +F  + NK V  W+++IAGL    
Sbjct: 498 WIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGL---- 553

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
                      M GR                  E A+ELF  M   ++K + VT   +  
Sbjct: 554 ----------AMHGRG-----------------EAAIELFLDMQETQVKPNSVTFTNLLC 586

Query: 481 ACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDV 538
           AC + G +D  K ++  +E+  G+    +  + +VD+  R G  + A++    M      
Sbjct: 587 ACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSA 646

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           S W A +GA  + GN E A +  + +L   I+P
Sbjct: 647 SVWGALLGACCIHGNLELAEKACSRLLE--IEP 677


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 279/744 (37%), Positives = 432/744 (58%), Gaps = 44/744 (5%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  + Y ++ F++    N      FM+N +IR Y        A +LY  +    +  D +
Sbjct: 25  FIHIDYTRRIFNFIENTN-----CFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNY 79

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+P ++ AC+   +  E  QVH  ++K+GFD DV+V N LIN +  C ++ D  RVF+E 
Sbjct: 80  TYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNES 139

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           S  + VSW S++         +EA +++ +M E  I                        
Sbjct: 140 SVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI------------------------ 175

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
                          +  N+++ ++   G V  A +LF E  ++++V  + +++ + +  
Sbjct: 176 ---------------IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNE 220

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           +  EA+     M   G   D V  +SA+SA A L  +  G++ H   L+ G E + ++ N
Sbjct: 221 MYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQN 280

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            +I MY KCG   +A ++FD      ++SWNS+I+G +K   V++A+ +F  MP +D +S
Sbjct: 281 ALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVS 340

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           W++M+ G  Q ++F+E + LF+ M     K D  T+V V SAC  L AL+  KW++AYI+
Sbjct: 341 WSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIK 400

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           +NG+  ++ L T L+DM+ +CG  + A++VF  M ++ +S W A I  +AM G  E +++
Sbjct: 401 RNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLD 460

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           +F+ M +  + P+ I F+GVL AC H GLV++G H F SM   H + P + HYGCMVDLL
Sbjct: 461 MFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLL 520

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L EA +L+  MP+ P+   WG+LL AC+KH + ++      ++ EL P+  G HV
Sbjct: 521 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHV 580

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSNIYAS GKW +V  +R  M +  + K+PG S IE NG +HEF +GD++HP+M+ I  
Sbjct: 581 LLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIED 640

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           ML EM  +L+  GY PD+  VLLDVDE+EK+  L  HSEKLA+AFGLI+ S   PIR++K
Sbjct: 641 MLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMK 700

Query: 800 NLRLCCDCHSFAKLVSKVYDREII 823
           NLR+C DCH+ AKL+SK + R+I+
Sbjct: 701 NLRICNDCHTAAKLISKAFCRKIV 724



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 219/519 (42%), Gaps = 104/519 (20%)

Query: 47  ELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY-------------- 92
           E KQ H H+LK G      Y+   +  C  + +  ++T A + F+               
Sbjct: 96  EAKQVHNHVLKLGFD-SDVYVRNTLINCFSVCS--NMTDACRVFNESSVLDSVSWNSILA 152

Query: 93  -YIKDNETSATLFMY-----------NSLIRGYSCIGLGVEA------------------ 122
            YI+         +Y           NS+I  +   GL VEA                  
Sbjct: 153 GYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSAL 212

Query: 123 -------------ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
                        I  +V +   G++ D+      L+AC        G  +H   +K+G 
Sbjct: 213 IACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGT 272

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDE------------------------------- 198
           +  + ++N LI  Y +CGDI+  R++FDE                               
Sbjct: 273 ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDS 332

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M E++VVSW+S+I   A+ DL  E + LF EM   G KP+  T+V VISACA+L  LE G
Sbjct: 333 MPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG 392

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             V AYI   G+  N ++   L+DMYMKCG V+TA ++F    ++ +   N ++      
Sbjct: 393 KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMN 452

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEG 373
           GL   +L +   M      P+ +T +  + A   +G +  G+     M H + ++  ++ 
Sbjct: 453 GLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKH 512

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
           +      M+D+  + GK + A  + + M     V +W +L+    K+GD E  R V  ++
Sbjct: 513 Y----GCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKL 568

Query: 433 P--GRDHISWNTMLGGL-TQENMFEEAMELFRVMLSERI 468
                DH  ++ +L  +   +  +++ +E+  +M   R+
Sbjct: 569 IELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRV 607


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 269/629 (42%), Positives = 389/629 (61%), Gaps = 7/629 (1%)

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ----NLELGDRVCAYIDELGMKANALM 276
           ++AV  +  M+  G +P++ T   ++ A A+      +      V A++  LGM  NA +
Sbjct: 1   EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            ++LV  Y   G    A+ L GEC     V  N ++S + R G   E+     +M   G 
Sbjct: 61  ASSLVAAYTAGGDGAAARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118

Query: 337 RPDRVTMLSAVSASAQ-LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            P  VT +S +SA  +   D+L G   HG V+ +G+     + N ++DMY +C     A 
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAW 178

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           ++FD M  ++VVSW SL++GL + G V+ AR++F  MP RD +SW  M+ G      F E
Sbjct: 179 KVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFRE 238

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A+E+FR M    +  D  TMV V +AC  LGAL++ +W+  Y+ + GI  D  +  AL+D
Sbjct: 239 ALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALID 298

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+++CG  +RA+ VF+ M  RD   WTA I  +A+ G  E+A+E+F+ M+R    PD + 
Sbjct: 299 MYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVT 358

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F+GVLTAC+H GLV++G   F SM + + ++P +VHYGC++DLLGRAG + EALD I  M
Sbjct: 359 FIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQM 418

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P+ PN  IWG+LLAAC+ H N +I    AER+ ELDPE S V++LLSNIYA   +W +V 
Sbjct: 419 PMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVR 478

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           R+R  + E+GI+K PG S IE++G +HEF +GD+SHP    I S L  +   L + GY P
Sbjct: 479 RLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFP 538

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           D+T V ++V E+EKK +L  HSEKLA+AF L+S+     IR+VKNLR+C DCH+  KL+S
Sbjct: 539 DVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLIS 598

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++Y RE++VRD  RFH FR G CSC D+W
Sbjct: 599 RLYGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 210/495 (42%), Gaps = 72/495 (14%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTK----SSAFGEGVQVHGAIVKMGFDRDVFVE 176
           +A++ Y  +   G  PD +TFP +L A  +    S +      VH  +V++G  R+  V 
Sbjct: 2   DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           + L+  Y   GD    R +  E      V+W +LI    R     E+   F +M   G  
Sbjct: 62  SSLVAAYTAGGDGAAARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGAA 119

Query: 237 PNSVTMVCVISACAK-LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC-------- 287
           P  VT V V+SAC K  +++ LG +V   +   G+  +  + NALVDMY +C        
Sbjct: 120 PTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWK 179

Query: 288 -----------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
                                  G VD A+ LF    +R+ V    ++  YV     REA
Sbjct: 180 VFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREA 239

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +  EM       D  TM+S ++A AQLG L  G     Y+ R G++    + N +IDM
Sbjct: 240 LEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDM 299

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KCG  E A  +F  M ++   +W ++I GL  NG                        
Sbjct: 300 YSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNG------------------------ 335

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGI 503
                    EEA+E+F  M+      D VT +GV +AC + G +D  +  + + IE   I
Sbjct: 336 -------YEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNI 388

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFN 562
             ++     ++D+  R G    A+    +M    + + W   + A  + GN E   EL  
Sbjct: 389 APNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIG-ELVA 447

Query: 563 EMLRQGIKPDSIVFV 577
           E L +    +S+V++
Sbjct: 448 ERLLELDPENSMVYI 462



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 182/412 (44%), Gaps = 56/412 (13%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H H+++ G+G      S +V      G   +        D          T   +N+LI 
Sbjct: 46  HAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGECD----------TPVAWNALIS 95

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA-FGEGVQVHGAIVKMGFD 170
           G++  G   E+   +V++A  G  P   T+  VL+AC K +     G+QVHG +V  G  
Sbjct: 96  GHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVL 155

Query: 171 RDVFVENCLINFYGECGD------IVDG-------------------------RRVFDEM 199
            D+ VEN L++ Y EC D      + DG                         R +FD M
Sbjct: 156 PDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRM 215

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
            ER+ VSWT++I         +EA+ +F EM    +  +  TMV VI+ACA+L  LE+G+
Sbjct: 216 PERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGE 275

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            V  Y+   G+K +A + NAL+DMY KCG+++ A  +F     R+      I+      G
Sbjct: 276 WVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNG 335

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGW 374
              EA+ +   M+     PD VT +  ++A    G +  GR     M   Y +   +  +
Sbjct: 336 YEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHY 395

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHM---SNKTVVSWNSLIAGLIKNGDVE 423
             I    ID+  + GK   A    D M    N T+  W +L+A    +G+ E
Sbjct: 396 GCI----IDLLGRAGKITEALDTIDQMPMTPNSTI--WGTLLAACRVHGNSE 441


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 297/810 (36%), Positives = 456/810 (56%), Gaps = 34/810 (4%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I +L NC+ L +++Q H      G+       +K++   +    + +L  A   FD    
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSY---YRALDDAYGLFDGMCV 141

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S     ++ ++ G++ +G  +     + EL   G  PD +T PFV+ AC       
Sbjct: 142 RDSVS-----WSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC------- 189

Query: 156 EGVQVHGAIVKMGFDRDVF-VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
                          RD+  ++  L++ Y +C +I D R +FD+M ER++V+WT +I   
Sbjct: 190 ---------------RDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGY 234

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A      E++ LF +M EEG+ P+ V MV V+ ACAKL  +     +  YI     + + 
Sbjct: 235 AECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV 294

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           ++  A++DMY KCG V++A+++F   +++N++  + +++ Y   G  R+AL +   ML  
Sbjct: 295 ILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSS 354

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G  PD++T+ S + A     +L   R  H     +G+     + N ++  Y      + A
Sbjct: 355 GMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDA 414

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
             +FD M  +  VSW+ ++ G  K GD  +    F E+        N  L      N   
Sbjct: 415 YGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNAN--- 471

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           E++ LF  M  E +  D+V MV V  AC  LGA+  A+ I  YI++     D+ L TA++
Sbjct: 472 ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMI 531

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM A+CG  + A ++F RME+++V +W+A I A    G G +A++LF  MLR GI P+ I
Sbjct: 532 DMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKI 591

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
             V +L ACSH GLV +G   F  M + + V   + HY C+VDLLGRAG L EAL LI+S
Sbjct: 592 TLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIES 651

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           M VE ++ +WG+ L AC+ H++V +A  AA  + EL P+  G ++LLSNIYA+AG+W +V
Sbjct: 652 MTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDV 711

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           A+ R  M ++ ++K+PG + IEV+ K H+F+ GD +HP    I  ML+ +  +L   GYV
Sbjct: 712 AKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYV 771

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           PD   VL DVDE+ K  +L  HSEKLA+AFGLI+T +  PIR++KNLR+C DCH+F KLV
Sbjct: 772 PDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLV 831

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S +  R IIVRD NRFH F++G+CSC D+W
Sbjct: 832 SAITGRVIIVRDANRFHHFKEGACSCGDYW 861



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 241/544 (44%), Gaps = 90/544 (16%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           F ++A        +  QVH      G   ++ V N LI FY     + D   +FD M  R
Sbjct: 83  FYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 142

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + VSW+ ++   A+          F E++  G +P++ T+  VI AC  L+NL++     
Sbjct: 143 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM----- 197

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                           ALVDMY+KC  ++ A+ LF + ++R+LV    ++  Y   G A 
Sbjct: 198 ----------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 241

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-M 381
           E+L + ++M   G  PD+V M++ V A A+LG +   R+   Y+ R   +  D I  T M
Sbjct: 242 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ-LDVILGTAM 300

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           IDMY KCG  E A  IFD M  K V+SW+++IA    +G             GR      
Sbjct: 301 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ------------GR------ 342

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                        +A++LFR+MLS  +  D++T+  +  AC     L   + ++A    +
Sbjct: 343 -------------KALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVH 389

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME---------- 551
           G+  ++ +A  LV  ++       A  +F  M  RD  +W+  +G  A            
Sbjct: 390 GMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF 449

Query: 552 ------------------GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
                             GN  +++ LF++M  +G+ PD +  V V+ AC+  G +++  
Sbjct: 450 RELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA- 508

Query: 594 HLFRSMTDI---HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
              R++ D          ++    M+D+  + G +  A ++   M  E N + W +++AA
Sbjct: 509 ---RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAA 564

Query: 651 CQKH 654
              H
Sbjct: 565 YGYH 568


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/752 (37%), Positives = 444/752 (59%), Gaps = 38/752 (5%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF-GILPDKFTFPFVLNACTKSSAF 154
           D      ++ +NS+I  Y   G   EAI  + +L        D +TFP VL AC      
Sbjct: 132 DQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTL 188

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
            +G ++H  + K+GF  DVFV   LI+ Y   G +   R +FD+M  R++ SW ++I   
Sbjct: 189 VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGL 248

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +     +A+ +  EM  EGI  +SVT+  ++  CA+L ++     +  Y+ + G++   
Sbjct: 249 IQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL 308

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + NAL++MY K G +  A+++F +   R++V  N+I++ Y +      A     +M L+
Sbjct: 309 FVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLN 368

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEM 393
           G  PD +T++S  S +AQ  D    R  HG+++R G L     I N ++DMY K G    
Sbjct: 369 GLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGV--- 425

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                                       ++SA +VF+ +P +D +SWNT++ G TQ  + 
Sbjct: 426 ----------------------------IDSAHKVFNLIPVKDVVSWNTLISGYTQNGLA 457

Query: 454 EEAMELFRVMLSER-IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            EA+E++R+M   R IK+++ T V + +A  ++GAL     I+ ++ K  +H D+ + T 
Sbjct: 458 SEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTC 517

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+D++ +CG    AM +F ++ +     W A I    + G+GE+A++LF EM  +G+KPD
Sbjct: 518 LIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPD 577

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + F+ +L+ACSH GLV++G   F  M + +G+ P + HYGCMVDLLGRAG L  A D I
Sbjct: 578 HVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFI 636

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           K MP+ P+  IWG+LL AC+ H N+++  +A++R+ E+D E  G +VLLSNIYA+ GKW 
Sbjct: 637 KDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWE 696

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            V +VR   +E+G++K PG SSIEVN +V  F +G++SHP+   I + LR +  +++  G
Sbjct: 697 GVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLG 756

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y+PD + VL DV+E EK+++L+ HSE+LA+AFG+IST     IR+ KNLR+C DCH+  K
Sbjct: 757 YIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATK 816

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S++ +REI+VRD+ RFH F+ G CSC D+W
Sbjct: 817 FISRITEREIVVRDSKRFHHFKNGICSCGDYW 848



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 256/520 (49%), Gaps = 50/520 (9%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           ++  F  + ++CTK+       ++H  +V  G  +  F+   L+N Y   GD+   R  F
Sbjct: 75  EEIDFNSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTF 131

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFE-MVEEGIKPNSVTMVCVISACAKLQNL 255
           D++  ++V +W S+I A  R    +EA+  F++ ++    + +  T   V+ AC   Q L
Sbjct: 132 DQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTL 188

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
             G ++  ++ +LG + +  +  +L+ MY + G V  A+ LF +   R++   N ++S  
Sbjct: 189 VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGL 248

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           ++ G A +AL +LDEM L G   D VT+ S +   AQLGD+    + H YV+++GLE   
Sbjct: 249 IQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL 308

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + N +I+MY K G    A ++F  M  + VVSWNS+IA   +N D  +AR  F +M   
Sbjct: 309 FVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKM--- 365

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                   L GL                     + D +T+V +AS          ++ ++
Sbjct: 366 -------QLNGL---------------------EPDLLTLVSLASIAAQSRDYKNSRSVH 397

Query: 496 AYIEKNGIHCD-MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
            +I + G   + + +  A++DM+A+ G    A +VF  +  +DV +W   I      G  
Sbjct: 398 GFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLA 457

Query: 555 EQAVELFNEMLR-QGIKPDSIVFVGVLTACSHGGLVNQGW----HLFRSMTDIHGVSPQI 609
            +A+E++  M   + IK +   +V +L A +H G + QG     HL +  T++H     +
Sbjct: 458 SEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIK--TNLH---LDV 512

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
               C++DL G+ G L +A+ L   +P E + V W ++++
Sbjct: 513 FVGTCLIDLYGKCGRLVDAMCLFYQVPRE-SSVPWNAIIS 551



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 248/524 (47%), Gaps = 50/524 (9%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           LK C+TL + ++ HC + K G        + ++   ++ G    +  A+  F     D+ 
Sbjct: 182 LKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGF---VGIARSLF-----DDM 233

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
               +  +N++I G    G   +A+ +  E+   GI  D  T   +L  C +        
Sbjct: 234 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTAT 293

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +H  ++K G + ++FV N LIN Y + G++ D ++VF +M  R+VVSW S+I A  + D
Sbjct: 294 LIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQND 353

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV- 277
            P  A   FF+M   G++P+ +T+V + S  A+ ++ +    V  +I   G    A+++ 
Sbjct: 354 DPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIG 413

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LLHGP 336
           NA++DMY K G +D+A ++F     +++V  NT++S Y + GLA EA+ +   M      
Sbjct: 414 NAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREI 473

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           + ++ T +S ++A A +G L  G   HG++++  L     +   +ID+Y KCG+   A  
Sbjct: 474 KLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMC 533

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENM 452
           +F  +  ++ V WN++I+    +G  E A ++F EM       DH+++ ++L   +   +
Sbjct: 534 LFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGL 593

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            +E                                    KW +  +++ GI   ++    
Sbjct: 594 VDE-----------------------------------GKWFFHLMQEYGIKPSLKHYGC 618

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +VD+  R G  + A    + M    D S W A +GA  + GN E
Sbjct: 619 MVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE 662


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/709 (38%), Positives = 417/709 (58%), Gaps = 35/709 (4%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R+VF  N L++ Y + G + D R VF EM ER+ VSWT ++    R     EA+ +F +M
Sbjct: 94  RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
           V +G+ P   T+  V+S+CA  +   +G +V +++ +LG+ +   + N++++MY KCG  
Sbjct: 154 VTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDA 213

Query: 291 DTAK-------------------------------QLFGECKDRNLVLCNTIMSNYVRLG 319
           +TA+                                LF    DR +V  N +++ Y + G
Sbjct: 214 ETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273

Query: 320 LAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           L  +AL     ML +    PD  T+ S +SA A LG +  G+  H Y+LR+ +     + 
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333

Query: 379 NTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           N +I MY K G  E A  +     M++  V+S+ +L+ G +K GD++ ARE+F  M  RD
Sbjct: 334 NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRD 393

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            ++W  M+ G  Q    +EAMELFR+M+    + +  T+  V S C  L  L+  K I+ 
Sbjct: 394 VVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHC 453

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
              ++       ++ ++V M+AR G    A +VF R+  +++   WT+ I A+A  G GE
Sbjct: 454 KAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGE 513

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
            AV LF EMLR G+KPD I FVGVL+AC+H G V++G   F+ + D HG+ P++ HY CM
Sbjct: 514 DAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACM 573

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLL RAGL  EA + I+ MPVEP+ + WGSLL+AC+ H+N D+A  AAE++  +DP  S
Sbjct: 574 VDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNS 633

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G +  LSN+Y++ G+W + A++  + K++ ++K  G S   +  +VH F + D  HP+ +
Sbjct: 634 GAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRD 693

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            +     +M   ++ AG+VPDL +VL DVD++ K+ +LS HSEKLA+AFGL+ST +   +
Sbjct: 694 TVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTL 753

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R++KNLR+C DCH+  K +SKV DREII+RD  RFH F+ G CSC D+W
Sbjct: 754 RIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 239/528 (45%), Gaps = 100/528 (18%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +  ++ G + +G   EAI +++++   G+ P +FT   VL++C  + A G G +VH  +V
Sbjct: 130 WTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVV 189

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV--------------------- 204
           K+G    V V N ++N YG+CGD    R VF+ M ER+V                     
Sbjct: 190 KLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALS 249

Query: 205 ----------VSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQ 253
                     VSW ++I    +  L  +A++ F  M+    + P+  T+  V+SACA L 
Sbjct: 250 LFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLG 309

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC--KDRNLVLCNTI 311
            + +G +V AYI    M     + NAL+ MY K G+V+ A+ +  +    D N++    +
Sbjct: 310 MVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTAL 369

Query: 312 MSNYVRLGLAR-------------------------------EALAILDEMLLHGPRPDR 340
           +  YV+LG  +                               EA+ +   M+  GP P+ 
Sbjct: 370 LEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNS 429

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T+ + +S  A L  L  G+  H   +R+  E   S+ N+++ MY + G    A R+FD 
Sbjct: 430 YTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDR 489

Query: 401 MS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
           +   K  V+W S+I  L ++G                       LG        E+A+ L
Sbjct: 490 VHWRKETVTWTSMIVALAQHG-----------------------LG--------EDAVGL 518

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFA 518
           F  ML   +K DR+T VGV SAC ++G +D  K  +  ++ K+GI  +M     +VD+ A
Sbjct: 519 FEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLA 578

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           R G    A +  ++M  + D  AW + + A  +  N + A EL  E L
Sbjct: 579 RAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLA-ELAAEKL 625



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLL----------CGRMCHGYVLRNGLEGWDSICNTMI 382
           LH   P   T ++A S S     LL           GR  H   ++ GL     +CN ++
Sbjct: 8   LHAGAPR--TAMAAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLL 65

Query: 383 DMYMKCGKQEM-----ACRIFDHM--SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
             Y             A R+FD +  + + V +WNSL++   K+G +  AR VF+EMP R
Sbjct: 66  SYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPER 125

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           D +SW  M+ GL +   F EA+++F  M+++ +   + T+  V S+C    A  + + ++
Sbjct: 126 DPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVH 185

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           +++ K G+   + +A ++++M+ +CGD + A  VF RM +R VS+W A +   A  G  +
Sbjct: 186 SFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMD 245

Query: 556 QAVELFNEMLRQGIKPDSIV--FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            A+ LF  M      PD  +  +  V+   +  GL  +    F  M     ++P
Sbjct: 246 LALSLFENM------PDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAP 293



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 150/337 (44%), Gaps = 64/337 (18%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           + +A++ FD       ++  +  + ++I GY   G   EA+ L+  +   G  P+ +T  
Sbjct: 379 MKHAREMFDVM-----SNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVA 433

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL+ C   +    G Q+H   ++   ++   V N ++  Y   G +   RRVFD +  R
Sbjct: 434 AVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWR 493

Query: 203 N-VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
              V+WTS+I A A+  L ++AV LF EM+  G+KP+ +T V V+SAC  +         
Sbjct: 494 KETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHV--------- 544

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY------ 315
                                     G VD  K+ F + +D++ ++    MS+Y      
Sbjct: 545 --------------------------GFVDEGKRYFQQLQDKHGIVPE--MSHYACMVDL 576

Query: 316 -VRLGLAREALAILDEMLLHGPRPDRV---TMLSA--VSASAQLGDLLCGRMCHGYVLRN 369
             R GL  EA   + +M +    PD +   ++LSA  V  +A L +L   ++     +  
Sbjct: 577 LARAGLFSEAQEFIQQMPVE---PDAIAWGSLLSACRVHKNADLAELAAEKLLS---IDP 630

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           G  G     + + ++Y  CG+   A +I+    +K+V
Sbjct: 631 GNSG---AYSALSNVYSACGRWNDAAKIWKRRKDKSV 664


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 287/802 (35%), Positives = 446/802 (55%), Gaps = 39/802 (4%)

Query: 43   KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
            K L E K  H  I   G+  +    +K+V      G   +L   ++ FD+ + DN+    
Sbjct: 465  KCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCG---ALREGRRIFDHILSDNK---- 517

Query: 103  LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            +F++N ++  Y+ IG   E+I L+ ++   GI  + +TF  +L         GE  ++HG
Sbjct: 518  VFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHG 577

Query: 163  AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             + K+GF     V N LI  Y + G++    ++FDE+ +R+VVSW S+I  C        
Sbjct: 578  CVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHS 637

Query: 223  AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            A+  F +M+   +  +  T+V  ++ACA + +L LG  +     +       +  N L+D
Sbjct: 638  ALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLD 697

Query: 283  MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            MY KCG ++ A Q F +   + +V   ++++ YVR GL  +A+ +  EM   G  PD  +
Sbjct: 698  MYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYS 757

Query: 343  MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            M S + A A    L  GR  H Y+ +N +     + N ++DMY KCG             
Sbjct: 758  MTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGS------------ 805

Query: 403  NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                               +E A  VFS++P +D +SWNTM+GG ++ ++  EA++LF  
Sbjct: 806  -------------------MEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAE 846

Query: 463  MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
            M  E  + D +TM  +  ACG L AL++ + I+  I +NG   ++ +A AL+DM+ +CG 
Sbjct: 847  MQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGS 905

Query: 523  PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
               A  +F  + ++D+  WT  I    M G G +A+  F +M   GIKPD I F  +L A
Sbjct: 906  LVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYA 965

Query: 583  CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
            CSH GL+N+GW  F SM     + P++ HY CMVDLL R G L +A +LI++MP++P+  
Sbjct: 966  CSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDAT 1025

Query: 643  IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
            IWG+LL  C+ H +V++A   AE + EL+P+ +G +VLL+NIYA A KW  V ++R ++ 
Sbjct: 1026 IWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIG 1085

Query: 703  EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
            ++G++K PG S IEV GK   F S D +HP+  +I S+L  +  ++++ G+ P +   L+
Sbjct: 1086 KRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALI 1145

Query: 763  DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
            +  + EK+  L  HSEKLAMAFG+++      IRV KNLR+C DCH  AK +SK   REI
Sbjct: 1146 NAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREI 1205

Query: 823  IVRDNNRFHFFRQGSCSCSDFW 844
            I+RD+NRFH F+ G CSC DFW
Sbjct: 1206 ILRDSNRFHHFKDGFCSCRDFW 1227



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 262/547 (47%), Gaps = 49/547 (8%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D   +  +L  C +     EG  VH  I   G   +  +   L+  Y  CG + +GRR+F
Sbjct: 450 DLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIF 509

Query: 197 DE-MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           D  +S+  V  W  ++   A+    +E++YLF +M + GI  NS T  C++   A L  +
Sbjct: 510 DHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRV 569

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
               R+   + +LG  +   +VN+L+  Y K G VD+A +LF E  DR++V  N+++S  
Sbjct: 570 GECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGC 629

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           V  G +  AL    +ML+     D  T++++V+A A +G L  GR  HG  ++       
Sbjct: 630 VMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREV 689

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
              NT++DMY KCG                               ++  A + F +M  +
Sbjct: 690 MFNNTLLDMYSKCG-------------------------------NLNDAIQAFEKMGQK 718

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
             +SW +++    +E ++++A+ LF  M S+ +  D  +M  V  AC    +LD  + ++
Sbjct: 719 TVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVH 778

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
            YI KN +   + ++ AL+DM+A+CG  + A  VF ++  +D+ +W   IG  +      
Sbjct: 779 NYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPN 838

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL----VNQGWH--LFRSMTDIHGVSPQI 609
           +A++LF EM ++  +PD I    +L AC  G L    + +G H  + R     +G S ++
Sbjct: 839 EALKLFAEMQKES-RPDGITMACLLPAC--GSLAALEIGRGIHGCILR-----NGYSSEL 890

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH--QNVDIAAYAAERI 667
                ++D+  + G L  A  L   +P E + + W  +++ C  H   N  IA +   RI
Sbjct: 891 HVANALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVMISGCGMHGLGNEAIATFQKMRI 949

Query: 668 TELDPEK 674
             + P++
Sbjct: 950 AGIKPDE 956



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           NT +    +      A+EL R  +S++ ++D      +   C     L   K +++ I  
Sbjct: 422 NTKICKFCEVGDLRNAVELLR--MSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISS 479

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRR-MEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           NGI  +  L   LV M+  CG  +   ++F   +    V  W   +   A  G+  +++ 
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
           LF +M + GI  +S  F  +L   +  G V +
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGE 571


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/709 (38%), Positives = 417/709 (58%), Gaps = 35/709 (4%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R+VF  N L++ + + G + D R VF EM ER+ VSWT ++    R     EA+    +M
Sbjct: 96  RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG-- 288
             +G  P   T+  V+S+CA  Q   +G +V +++ +LG+ +   + N++++MY KCG  
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDS 215

Query: 289 -----------------------------AVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
                                         +D A+ LF    DR++V  N +++ Y + G
Sbjct: 216 ETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275

Query: 320 LAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           L  +AL +   ML      PD  T+ S +SA A LG++  G+  H Y+LR  +     + 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 379 NTMIDMYMKCGKQEMACRIFDHM--SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           N +I  Y K G  E A RI D    ++  V+S+ +L+ G +K GD+ESARE+F  M  RD
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            ++W  M+ G  Q    +EA++LFR M++   + +  T+  V S C  L  LD  K I+ 
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGE 555
              ++ +     ++ A++ M+AR G    A ++F ++  +++   WT+ I A+A  G GE
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +AV LF EMLR G++PD I +VGVL+ACSH G VN+G   +  + + H ++P++ HY CM
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLL RAGL  EA + I+ MPVEP+ + WGSLL+AC+ H+N ++A  AAE++  +DP  S
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G +  ++N+Y++ G+W++ AR+    KE+ +RK  G S   +  K+H F + D  HP+ +
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            + +M   M   ++ AG+VPDL +VL DVD++ K+ LLS HSEKLA+AFGLIST +   +
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           RV+KNLR+C DCH+  K +SKV DREIIVRD  RFH FR G CSC D+W
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 233/528 (44%), Gaps = 100/528 (18%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +  ++ G +  G   EAI   +++   G  P +FT   VL++C  + A   G +VH  +V
Sbjct: 132 WTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVV 191

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDE--------------------------- 198
           K+G    V V N ++N YG+CGD      VF+                            
Sbjct: 192 KLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAES 251

Query: 199 ----MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQ 253
               M +R++VSW ++I    +  L  +A+ LF  M+ E  + P+  T+  V+SACA L 
Sbjct: 252 LFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLG 311

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV----------------------- 290
           N+ +G +V AYI    M  N+ + NAL+  Y K G+V                       
Sbjct: 312 NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTAL 371

Query: 291 ----------DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                     ++A+++FG   +R++V    ++  Y + G   EA+ +   M+  GP P+ 
Sbjct: 372 LEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNS 431

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T+ + +S  A L  L  G+  H   +R+ LE   S+ N +I MY + G    A R+FD 
Sbjct: 432 YTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQ 491

Query: 401 MS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
           +   K  ++W S+I  L ++G                                 EEA+ L
Sbjct: 492 VCWRKETITWTSMIVALAQHGQ-------------------------------GEEAVGL 520

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFA 518
           F  ML   ++ DR+T VGV SAC + G ++  K  Y  I+ ++ I  +M     +VD+ A
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           R G    A +  RRM  + D  AW + + A  +  N E A EL  E L
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA-ELAAEKL 627



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 200/426 (46%), Gaps = 38/426 (8%)

Query: 265 IDELGM-KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            DE+ + + N    N+L+ M+ K G +  A+ +F E  +R+ V    ++    R G   E
Sbjct: 88  FDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE 147

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           A+  L +M   G  P + T+ + +S+ A       GR  H +V++ GL     + N++++
Sbjct: 148 AIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN 207

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG  E A  +F+ M  ++V SWN++++     G ++ A  +F  MP R  +SWN M
Sbjct: 208 MYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAM 267

Query: 444 LGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           + G  Q  +  +A++LF  ML E  +  D  T+  V SAC  LG + + K ++AYI +  
Sbjct: 268 IAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTE 327

Query: 503 IHCDMQLATALVDMFARC---------------------------------GDPQRAMQV 529
           +  + Q+  AL+  +A+                                  GD + A ++
Sbjct: 328 MAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREM 387

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M  RDV AWTA I      G  ++A++LF  M+  G +P+S     VL+ C+    +
Sbjct: 388 FGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACL 447

Query: 590 NQGWHLF-RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + G  +  R++  +   S  + +   ++ +  R+G    A  +   +      + W S++
Sbjct: 448 DYGKQIHCRAIRSLLEQSSSVSN--AIITMYARSGSFPWARRMFDQVCWRKETITWTSMI 505

Query: 649 AACQKH 654
            A  +H
Sbjct: 506 VALAQH 511



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 168/382 (43%), Gaps = 68/382 (17%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
           ++  +N++I GY+  GL  +A+ L+   L    + PD+FT   VL+AC        G QV
Sbjct: 260 SIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQV 319

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE---------------------- 198
           H  I++     +  V N LI+ Y + G + + RR+ D+                      
Sbjct: 320 HAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIG 379

Query: 199 -----------MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                      M+ R+VV+WT++I    +     EA+ LF  M+  G +PNS T+  V+S
Sbjct: 380 DMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 439

Query: 248 ACAKLQNLELGDRV-CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNL 305
            CA L  L+ G ++ C  I  L ++ ++ + NA++ MY + G+   A+++F + C  +  
Sbjct: 440 VCASLACLDYGKQIHCRAIRSL-LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 498

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           +   +++    + G   EA+ + +EML  G  PDR+T +  +SA +  G           
Sbjct: 499 ITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG----------- 547

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
            +  G   +D I N                   +H     +  +  ++  L + G    A
Sbjct: 548 FVNEGKRYYDQIKN-------------------EHQIAPEMSHYACMVDLLARAGLFSEA 588

Query: 426 REVFSEMPGR-DHISWNTMLGG 446
           +E    MP   D I+W ++L  
Sbjct: 589 QEFIRRMPVEPDAIAWGSLLSA 610



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 176/427 (41%), Gaps = 93/427 (21%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           H++   P +      L  C  L  +   KQ H +IL+  + +     + ++ T A+ G+ 
Sbjct: 289 HESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSV 348

Query: 81  ESLTYAQKAFDY-----------------YIK--DNETSATLF---------MYNSLIRG 112
           E+   A++  D                  Y+K  D E++  +F          + ++I G
Sbjct: 349 EN---ARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 405

Query: 113 YSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD 172
           Y   G   EAI L+  +   G  P+ +T   VL+ C   +    G Q+H   ++   ++ 
Sbjct: 406 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 465

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERN-VVSWTSLICACARRDLPKEAVYLFFEMV 231
             V N +I  Y   G     RR+FD++  R   ++WTS+I A A+    +EAV LF EM+
Sbjct: 466 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 525

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
             G++P+ +T V V+SAC+                                     G V+
Sbjct: 526 RAGVEPDRITYVGVLSACS-----------------------------------HAGFVN 550

Query: 292 TAKQLFGECKDRNLVLCNTIMSNY-------VRLGLAREALAILDEMLLHGPRPDRV--- 341
             K+ + + K+ + +     MS+Y        R GL  EA   +  M +    PD +   
Sbjct: 551 EGKRYYDQIKNEHQIAPE--MSHYACMVDLLARAGLFSEAQEFIRRMPVE---PDAIAWG 605

Query: 342 TMLSA--VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           ++LSA  V  +A+L +L   ++    +  N    + +I N    +Y  CG+   A RI+ 
Sbjct: 606 SLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIAN----VYSACGRWSDAARIWK 659

Query: 400 HMSNKTV 406
               K V
Sbjct: 660 ARKEKAV 666


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 291/738 (39%), Positives = 430/738 (58%), Gaps = 69/738 (9%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSER 202
           LN   K        Q+H  I+K G +  VFV++ LI+F      GD+     +F+E  + 
Sbjct: 32  LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQH 91

Query: 203 ---NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              NV  W SLI   +    P  +++LF  M+  G++PNS T   +  +C K +    G 
Sbjct: 92  HKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGK 151

Query: 260 RVCAYIDELGMKAN-------------------------------ALMVNALVDMYMKCG 288
           ++ A+  +L +  N                               A+   AL+  Y+  G
Sbjct: 152 QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG 211

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +D A++LF E   +++V  N ++S YV+ G   EA+    EM      P++ TM+  +S
Sbjct: 212 CLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLS 271

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A         G+    +V  NG      + N +IDMY KCG+ ++A              
Sbjct: 272 ACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIA-------------- 317

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
                            RE+F  +  +D ISWNTM+GG +  +++EEA+ LF VML   +
Sbjct: 318 -----------------RELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNV 360

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAM 527
           K + VT +G+  AC  LGALDL KW++AYI+KN  +  +  L T+L+DM+A+CG  + A 
Sbjct: 361 KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAE 420

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI-KPDSIVFVGVLTACSHG 586
           +VFR M  R++++W A +   AM G+ E+A+ LF+EM+ +G+ +PD I FVGVL+AC+  
Sbjct: 421 RVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQA 480

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GLV+ G   FRSM   +G+SP++ HYGCM+DLL RA    EA  L+K+M +EP+  IWGS
Sbjct: 481 GLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGS 540

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL+AC+ H  V+   Y AER+ +L+PE +G  VLLSNIYA AG+W +VAR+R ++ ++G+
Sbjct: 541 LLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGM 600

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
           +K+PG +SIE++G VHEF  GD+ HPE NNI  ML E++  L + G+VP+ + VL D+DE
Sbjct: 601 KKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDE 660

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           + K+  LS HSEKLA++FGLI T     IR+VKNLR+C +CHS  KL+SK+++REII RD
Sbjct: 661 EWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARD 720

Query: 827 NNRFHFFRQGSCSCSDFW 844
            NRFH F+ G CSC+D W
Sbjct: 721 RNRFHHFKDGFCSCNDCW 738



 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 180/595 (30%), Positives = 288/595 (48%), Gaps = 84/595 (14%)

Query: 1   MALTLNPSPLVL----ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHIL 56
           + +T +PSP +L    A+     +  QH         P +  L+ CK +N  KQ H  I+
Sbjct: 2   LLVTSSPSPSILHFLPASDPPYKILEQH---------PYLNLLEKCKNINTFKQIHSLII 52

Query: 57  KQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCI 116
           K GL +     SK++  CA +     L+YA   F+           +F++NSLIRGYS  
Sbjct: 53  KTGLNNTVFVQSKLIHFCA-VSPSGDLSYALSLFEE--NQQHHKHNVFIWNSLIRGYSLS 109

Query: 117 GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE 176
              + ++ L+  +  +G+ P+  TFPF+  +CTK+ A  EG Q+H   +K+    +  V 
Sbjct: 110 SSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVH 169

Query: 177 NCLINFYGECGD-------------------------------IVDGRRVFDEMSERNVV 205
             +I+ Y   G+                               + D RR+FDE+  ++VV
Sbjct: 170 TSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVV 229

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW ++I    +    +EA+  F+EM E  + PN  TMV V+SAC   ++ ELG  + +++
Sbjct: 230 SWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWV 289

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            + G  +N  + NAL+DMY KCG  D A++LF   ++++++  NT++  Y  L L  EAL
Sbjct: 290 RDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEAL 349

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV---LRNGLEGWDSICNTMI 382
           A+ + ML    +P+ VT L  + A A LG L  G+  H Y+   LRN      S+  ++I
Sbjct: 350 ALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNA--SLWTSLI 407

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY KCG  E A R+F  M ++ + SWN++++G   +G  E A  +FSEM  +       
Sbjct: 408 DMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKG------ 461

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKN 501
                           LFR         D +T VGV SAC   G +DL  ++  + I+  
Sbjct: 462 ----------------LFR--------PDDITFVGVLSACTQAGLVDLGHQYFRSMIQDY 497

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           GI   +Q    ++D+ AR    + A  + + ME + D + W + + A    G  E
Sbjct: 498 GISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE 552



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 201/425 (47%), Gaps = 41/425 (9%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           S    K  +E KQ H H LK  L   P   + V+   A +G    + +A+  FD     +
Sbjct: 140 SCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVG---EMDFARLVFDKSSLRD 196

Query: 98  ETSATLFM--------------------------YNSLIRGYSCIGLGVEAISLYVELAG 131
             S T  +                          +N++I GY   G   EAI  + E+  
Sbjct: 197 AVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQE 256

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
             +LP+K T   VL+AC  + +   G  +   +   GF  ++ + N LI+ Y +CG+   
Sbjct: 257 ANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDI 316

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R +FD + E++V+SW ++I   +   L +EA+ LF  M+   +KPN VT + ++ ACA 
Sbjct: 317 ARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACAC 376

Query: 252 LQNLELGDRVCAYIDE-LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
           L  L+LG  V AYID+ L   +NA +  +L+DMY KCG ++ A+++F     RNL   N 
Sbjct: 377 LGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNA 436

Query: 311 IMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGR-----MCHG 364
           ++S +   G A  ALA+  EM+  G  RPD +T +  +SA  Q G +  G      M   
Sbjct: 437 MLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQD 496

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVE 423
           Y +   L+ +      MID+  +  K E A  +  +M  +   + W SL++    +G VE
Sbjct: 497 YGISPKLQHY----GCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE 552

Query: 424 SAREV 428
               V
Sbjct: 553 FGEYV 557


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 289/800 (36%), Positives = 446/800 (55%), Gaps = 47/800 (5%)

Query: 49  KQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           KQ   HI++ G     ++ + + K+   C  M        A++ FD    +N+T  T   
Sbjct: 81  KQVRDHIIQSGRQLNIYELNTLIKLHSICGNM------LEARQTFDSV--ENKTVVT--- 129

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I GY+ +G   EA +L+ ++    + P   TF  VL+AC+  +    G + H  ++
Sbjct: 130 WNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVI 189

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+GF  D  +   L++ Y + G +   R+VFD + +R+V ++  +I   A+    ++A  
Sbjct: 190 KVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQ 249

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF+ M +EG KPN ++ + ++  C+  + L  G  V A     G+  +  +  AL+ MYM
Sbjct: 250 LFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYM 309

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
            CG+++ A+++F + K R++V    ++  Y       +A  +   M   G +PDR+T + 
Sbjct: 310 GCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIH 369

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNK 404
            ++A A   DL   R  H  V+R G  G D + +T ++ MY KCG               
Sbjct: 370 IINACASSADLSLAREIHSQVVRAGF-GTDLLVDTALVHMYAKCGA-------------- 414

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                            ++ AR+VF  M  RD +SW+ M+G   +    EEA E F +M 
Sbjct: 415 -----------------IKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMK 457

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              ++ D VT + + +ACG+LGALDL   IY    K  +   + +  AL++M  + G  +
Sbjct: 458 RNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIE 517

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
           RA  +F  M +RDV  W   IG  ++ GN  +A++LF+ ML++  +P+S+ FVGVL+ACS
Sbjct: 518 RARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACS 577

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
             G V +G   F  + D  G+ P +  YGCMVDLLGRAG L EA  LI  MP++PN  IW
Sbjct: 578 RAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIW 637

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LLAAC+ + N+D+A  AAER    +P    V+V LS++YA+AG W NVA+VR  M+ +
Sbjct: 638 STLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESR 697

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
           G+RK  G + IEV GK+H F   D SHP+   I + L  +   ++  GY+P   NVL +V
Sbjct: 698 GVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNV 757

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
            EQEK+  +S+HSEKLA+A+G++S     PIR+ KNLR+C DCHS +K +SKV  REII 
Sbjct: 758 GEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIA 817

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD +RFH F+ G CSC D+W
Sbjct: 818 RDASRFHHFKNGVCSCGDYW 837



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 263/550 (47%), Gaps = 64/550 (11%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D  T+  +   C      G G QV   I++ G   +++  N LI  +  CG++++ R+ F
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           D +  + VV+W ++I   A+    KEA  LF +MV+E ++P+ +T + V+ AC+    L+
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
           LG    A + ++G  ++  +  ALV MY+K G++D A+Q+F     R++   N ++  Y 
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           + G   +A  +   M   G +P+R++ LS +   +    L  G+  H   +  GL     
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +   +I MYM CG  E A R+FD M  + VVSW  +I G  +N ++              
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNI-------------- 345

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                            E+A  LF  M  E I+ DR+T + + +AC     L LA+ I++
Sbjct: 346 -----------------EDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHS 388

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            + + G   D+ + TALV M+A+CG  + A QVF  M +RDV +W+A IGA    G GE+
Sbjct: 389 QVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEE 448

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR------------------S 598
           A E F+ M R  ++PD + ++ +L AC H G ++ G  ++                   +
Sbjct: 449 AFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALIN 508

Query: 599 MTDIHG------------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDVI 643
           M   HG            V   +V +  M+      G   EALDL   M  E   PN V 
Sbjct: 509 MNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVT 568

Query: 644 WGSLLAACQK 653
           +  +L+AC +
Sbjct: 569 FVGVLSACSR 578



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%)

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           +D  T V +   C  L    L K +  +I ++G   ++     L+ + + CG+   A Q 
Sbjct: 59  IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
           F  +E + V  W A I   A  G+ ++A  LF +M+ + ++P  I F+ VL ACS
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACS 173


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 295/773 (38%), Positives = 442/773 (57%), Gaps = 20/773 (2%)

Query: 72   CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
            C C +M      + A++ FD   + N  S     +  +I GY  I    EA  ++V++  
Sbjct: 306  CHCYRM------SEARELFDQMPERNSVS-----WMVMISGYVHISDYWEAWDVFVKMCR 354

Query: 132  FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
                PD+  F  VL+A T          +    +K G++ DV V + ++N Y   G +  
Sbjct: 355  TVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDL 414

Query: 192  GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
                F+ M ERN  SWT++I A A+     +A+ L+ E V E        M+   +   +
Sbjct: 415  AMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLY-ERVPEQTVATKTAMMTAYAQVGR 473

Query: 252  LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
            +Q   L        DE+ +  N +  NA++  Y + G +  AK LF +   +N      +
Sbjct: 474  IQKARL------IFDEI-LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAM 526

Query: 312  MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
            ++ +V+   +REAL +L E+   G  P   +  SA+SA A +GD+  GR+ H   ++ G 
Sbjct: 527  IAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGC 586

Query: 372  EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
            +    + N +I MY KCG  E    +F  +  K  VSWNSLI+GL +N  ++ AR VF +
Sbjct: 587  QFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEK 646

Query: 432  MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
            MP RD +SW  ++    Q    E A++LF  ML+  IK +++T+  + SACG LGA+ L 
Sbjct: 647  MPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG 706

Query: 492  KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
            +  +A I K G    + +  +L+ M+ +CG  +    VF  M + D+  W A +   A  
Sbjct: 707  EQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQN 765

Query: 552  GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
            G G++A+++F +M  +GI PD + F+GVL ACSH GLV++GW  F SMT  +G+ P + H
Sbjct: 766  GLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYH 825

Query: 612  YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
            Y CMVDLLGRAG L EA  LI++MPV+P+ VIW +LL AC+ H+NV++    AER+ ++ 
Sbjct: 826  YTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMT 885

Query: 672  PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
              KS  +VLLSN++AS G W  VA +R  MK+QG+ K PG S I+V  K+H F +GD +H
Sbjct: 886  KPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTH 945

Query: 732  PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
             ++  I S L+E     R  GY+PD   VL DV+E++K+  L +HSEKLA+ FG++ST  
Sbjct: 946  DQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPN 1005

Query: 792  TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              PI+++KNLR+C DCH+F K +SKV  R+II+RD NRFH FR GSCSC D+W
Sbjct: 1006 GSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 157/642 (24%), Positives = 284/642 (44%), Gaps = 119/642 (18%)

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL 135
           ++G    +  A++ F+  I+ +  S     +NS+I GYS  G   EA  L+    G  I 
Sbjct: 180 ELGRLGRVEEARRVFNEMIQRDVVS-----WNSMINGYSQNGKVDEARLLFDAFVGKNIR 234

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
               T+  +L    K     E  +V  ++     +R+V   N +I+ Y + GD+ + R++
Sbjct: 235 ----TWTILLTGYAKEGRIEEAREVFESMT----ERNVVSWNAMISGYVQNGDLKNARKL 286

Query: 196 FDEMSERNVVSWTSLI---CACAR----RDL----PK--------------------EAV 224
           FDEM E+NV SW S++   C C R    R+L    P+                    EA 
Sbjct: 287 FDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAW 346

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            +F +M     +P+    V V+SA   L +LEL   +     + G + + ++ +A+++ Y
Sbjct: 347 DVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAY 406

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            + G++D A   F    +RN     T+++ + + G   +A+ + + +    P     T  
Sbjct: 407 TRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV----PEQTVATKT 462

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           + ++A AQ+G +   R+                                   IFD + N 
Sbjct: 463 AMMTAYAQVGRIQKARL-----------------------------------IFDEILNP 487

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF-RVM 463
            VV+WN++IAG  +NG ++ A+++F +MP ++  SW  M+ G  Q     EA+EL   + 
Sbjct: 488 NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
            S  +  D  +     SAC  +G +++ + I++   K G   +  +   L+ M+A+CG+ 
Sbjct: 548 RSGSVPSDS-SFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNV 606

Query: 524 QRAMQVFR-------------------------------RMEKRDVSAWTAAIGAMAMEG 552
           +    VFR                               +M KRDV +WTA I A    G
Sbjct: 607 EDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAG 666

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           +GE A++LF +ML +GIKP+ +    +L+AC + G +  G   F ++    G    +   
Sbjct: 667 HGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG-EQFHALIFKLGFDTFLFVG 725

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             ++ +  + G   +   + + MP E + + W ++L  C ++
Sbjct: 726 NSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQN 765



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 176/373 (47%), Gaps = 18/373 (4%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N  +    + G V+ A+++F E   R++V  N++++ Y + G   EA  + D  +    R
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
               T    ++  A+ G +   R     +    +  W    N MI  Y++ G  + A ++
Sbjct: 235 ----TWTILLTGYAKEGRIEEAREVFESMTERNVVSW----NAMISGYVQNGDLKNARKL 286

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD M  K V SWNS++ G      +  ARE+F +MP R+ +SW  M+ G    + + EA 
Sbjct: 287 FDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAW 346

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           ++F  M     + D+   V V SA   L  L+L   +     K G   D+ + +A+++ +
Sbjct: 347 DVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAY 406

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            R G    AM  F  M +R+  +WT  I A A  G  + A++L+  +  Q +   +    
Sbjct: 407 TRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKT---- 462

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            ++TA +  G + +   +F  +     ++P +V +  ++    + G+L EA DL + MPV
Sbjct: 463 AMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPV 517

Query: 638 EPNDVIWGSLLAA 650
           + N   W +++A 
Sbjct: 518 K-NSASWAAMIAG 529



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 154/331 (46%), Gaps = 26/331 (7%)

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
           CNT I    + G+ E A R+F+ M  + VVSWNS+I G  +NG V+ AR +F    G++ 
Sbjct: 174 CNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI 233

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL--GALDLAKWIY 495
            +W  +L G  +E   EEA E+F  M +ER  V    M+      GY+  G L  A+ ++
Sbjct: 234 RTWTILLTGYAKEGRIEEAREVFESM-TERNVVSWNAMIS-----GYVQNGDLKNARKLF 287

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
             + +  +        ++V  +  C     A ++F +M +R+  +W   I       +  
Sbjct: 288 DEMPEKNVAS----WNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYW 343

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI---HGVSPQIVHY 612
           +A ++F +M R   +PD  +FV VL+A +  GL      L  S+  I    G    +V  
Sbjct: 344 EAWDVFVKMCRTVARPDQSIFVVVLSAIT--GL--DDLELIGSLRPIAIKTGYEGDVVVG 399

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
             +++   R G L  A+   ++MP E N+  W +++AA  +   +D A    ER+ E   
Sbjct: 400 SAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAAFAQCGRLDDAIQLYERVPE--- 455

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           +       +   YA  G+   + + RL   E
Sbjct: 456 QTVATKTAMMTAYAQVGR---IQKARLIFDE 483



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 141/307 (45%), Gaps = 34/307 (11%)

Query: 20  LTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQ 76
           L   H++ + P DS    +L  C  + ++   +  H   +K G       ++ ++   A+
Sbjct: 543 LIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAK 602

Query: 77  MGTFESLTYAQKAF-----------------DYYIKDNET------SATLFMYNSLIRGY 113
            G  E  ++  +                   +Y + D            +  + ++I  Y
Sbjct: 603 CGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAY 662

Query: 114 SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDV 173
              G G  A+ L++++   GI P++ T   +L+AC    A   G Q H  I K+GFD  +
Sbjct: 663 VQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFL 722

Query: 174 FVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE 233
           FV N LI  Y +CG   DG  VF+EM E ++++W +++  CA+  L KEA+ +F +M  E
Sbjct: 723 FVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVE 781

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKCGA 289
           GI P+ ++ + V+ AC+   +  L D   A+ + +  K   + +      +VD+  + G 
Sbjct: 782 GILPDQMSFLGVLCACS---HAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGY 838

Query: 290 VDTAKQL 296
           +  A+ L
Sbjct: 839 LSEAEAL 845


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 296/800 (37%), Positives = 446/800 (55%), Gaps = 47/800 (5%)

Query: 49  KQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           KQ   HI++ G     ++ + + K+   C       ++T A++ FD    +N+T  T   
Sbjct: 77  KQVRDHIIQGGRQLNIYELNTLIKLYSICG------NVTEARQIFDSV--ENKTVVT--- 125

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+LI GY+ +G   EA +L+ ++   G+ P   TF  VL+AC+  +    G +VH  +V
Sbjct: 126 WNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVV 185

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             GF  D  +   L++ Y + G + D R+VFD +  R+V ++  ++   A+    ++A  
Sbjct: 186 TAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFE 245

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF+ M + G+KPN ++ + ++  C   + L  G  V A     G+  +  +  +L+ MY 
Sbjct: 246 LFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYT 305

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
            CG+++ A+++F   K R++V    ++  Y   G   +A  +   M   G +PDR+T + 
Sbjct: 306 TCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMH 365

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNK 404
            ++A A   +L   R  H  V   G  G D + +T ++ MY KCG               
Sbjct: 366 IMNACAISANLNHAREIHSQVDIAGF-GTDLLVSTALVHMYAKCGA-------------- 410

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                            ++ AR+VF  MP RD +SW+ M+G   +     EA E F +M 
Sbjct: 411 -----------------IKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMK 453

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              I+ D VT + + +ACG+LGALD+   IY    K  +   + L  AL+ M A+ G  +
Sbjct: 454 RSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVE 513

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
           RA  +F  M +RDV  W A IG  ++ GN  +A+ LF+ ML++  +P+S+ FVGVL+ACS
Sbjct: 514 RARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACS 573

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
             G V++G   F  + +  G+ P +  YGCMVDLLGRAG L EA  LIKSMPV+P   IW
Sbjct: 574 RAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIW 633

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            SLL AC+ H N+D+A  AAER   +DP    V+V LS++YA+AG W NVA+VR  M+ +
Sbjct: 634 SSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESR 693

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
           GIRK  G + IEV GKVH F   D SHP +  I + L  +   ++  GY+P   NVL DV
Sbjct: 694 GIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDV 753

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
            EQ+K+  +S+HSEKLA+A+G++S     PIR+ KNLR+C DCHS +K +SKV  REII 
Sbjct: 754 GEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIA 813

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD +RFH F+ G CSC D+W
Sbjct: 814 RDASRFHHFKDGVCSCGDYW 833



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 262/531 (49%), Gaps = 33/531 (6%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D  T+  +   CT+      G QV   I++ G   +++  N LI  Y  CG++ + R++F
Sbjct: 56  DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           D +  + VV+W +LI   A+    KEA  LF +MV+EG++P+ +T + V+ AC+    L 
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
            G  V A +   G  ++  +  ALV MY+K G++D A+Q+F     R++   N ++  Y 
Sbjct: 176 WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYA 235

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           + G   +A  +   M   G +P++++ LS +        L  G+  H   +  GL     
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR 295

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +  ++I MY  CG  E A R+FD+M  + VVSW  +I G  +NG++              
Sbjct: 296 VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNI-------------- 341

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                            E+A  LF  M  E I+ DR+T + + +AC     L+ A+ I++
Sbjct: 342 -----------------EDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHS 384

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            ++  G   D+ ++TALV M+A+CG  + A QVF  M +RDV +W+A IGA    G G +
Sbjct: 385 QVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTE 444

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A E F+ M R  I+PD + ++ +L AC H G ++ G  ++        VS  +     ++
Sbjct: 445 AFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVS-HVPLGNALI 503

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
            +  + G +  A  +  +M V  + + W +++     H N   A Y  +R+
Sbjct: 504 IMNAKHGSVERARYIFDTM-VRRDVITWNAMIGGYSLHGNAREALYLFDRM 553



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 241/521 (46%), Gaps = 46/521 (8%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD-YYIKDNETSATL 103
           LN  K+ H  ++  G        + +V    + G+ +    A++ FD  +I+D  T    
Sbjct: 174 LNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDD---ARQVFDGLHIRDVST---- 226

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
             +N ++ GY+  G   +A  L+  +   G+ P+K +F  +L+ C    A   G  VH  
Sbjct: 227 --FNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQ 284

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
            +  G   D+ V   LI  Y  CG I   RRVFD M  R+VVSWT +I   A     ++A
Sbjct: 285 CMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDA 344

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
             LF  M EEGI+P+ +T + +++ACA   NL     + + +D  G   + L+  ALV M
Sbjct: 345 FGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHM 404

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCGA+  A+Q+F     R++V  + ++  YV  G   EA      M      PD VT 
Sbjct: 405 YAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTY 464

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           ++ ++A   LG L  G   +   ++  L     + N +I M  K G  E A  IFD M  
Sbjct: 465 INLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVR 524

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           + V++WN++I G   +G+                                 EA+ LF  M
Sbjct: 525 RDVITWNAMIGGYSLHGNA-------------------------------REALYLFDRM 553

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAY-IEKNGIHCDMQLATALVDMFARCGD 522
           L ER + + VT VGV SAC   G +D  +  + Y +E  GI   ++L   +VD+  R G+
Sbjct: 554 LKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGE 613

Query: 523 PQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN---GEQAVE 559
              A  + + M  +  S+ W++ + A  + GN    E+A E
Sbjct: 614 LDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAE 654



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 203/420 (48%), Gaps = 35/420 (8%)

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           E G   +S T V +   C +L++  LG +V  +I + G + N   +N L+ +Y  CG V 
Sbjct: 50  EGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVT 109

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A+Q+F   +++ +V  N +++ Y ++G  +EA A+  +M+  G  P  +T LS + A +
Sbjct: 110 EARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACS 169

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
               L  G+  H  V+  G      I   ++ MY+K G  + A ++FD +  + V ++N 
Sbjct: 170 SPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNV 229

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           ++ G  K+GD                               +E+A ELF  M    +K +
Sbjct: 230 MVGGYAKSGD-------------------------------WEKAFELFYRMQQVGLKPN 258

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           +++ + +   C    AL   K ++A     G+  D+++AT+L+ M+  CG  + A +VF 
Sbjct: 259 KISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFD 318

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            M+ RDV +WT  I   A  GN E A  LF  M  +GI+PD I ++ ++ AC+    +N 
Sbjct: 319 NMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNH 378

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAA 650
              +  S  DI G    ++    +V +  + G + +A  +  +MP    DV+ W +++ A
Sbjct: 379 AREI-HSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP--RRDVVSWSAMIGA 435


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 283/748 (37%), Positives = 430/748 (57%), Gaps = 42/748 (5%)

Query: 97  NETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
           +E  ATLF +   +  YS + L ++  S Y+  +GF    D F F  +L+          
Sbjct: 37  SEFPATLFKF---LNFYSSLPLPLDH-SDYIPYSGFDF--DSF-FSSLLDHSVHKRHLN- 88

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
             Q+H  +V  G     F+    +N     G+I   R+VFDE  E +V  W ++I   + 
Sbjct: 89  --QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSS 146

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
            +   +A+ ++  M   G+ P+  T+ CV+ AC+ +  LE+G RV   I  LG +++  +
Sbjct: 147 HNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFV 206

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            N LV +Y KCG V+ A+ +F    DRN+V   +++S Y + GL  EAL I  +M     
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNV 266

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           +PD + ++S + A   + DL  G+  HG V++ GLE    +  ++  MY KCG+      
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQ------ 320

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    V  AR  F +M   + + WN M+ G  +     EA
Sbjct: 321 -------------------------VMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEA 355

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + LF+ M+S+ I+ D +T+     AC  +G+LDLAKW+  YI K     D+ + TAL+DM
Sbjct: 356 VGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDM 415

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           FA+CG    A +VF R   +DV  W+A I    + G G+ A++LF  M + G+ P+ + F
Sbjct: 416 FAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTF 475

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           VG+LTAC+H GLV +GW LF SM   +G+  +  HY C+VDLLGR+G L EA D I +MP
Sbjct: 476 VGLLTACNHSGLVEEGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMP 534

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           +EP   +WG+LL AC+ +++V +  YAAE++  LDP  +G +V LSN+YAS+  W +VA+
Sbjct: 535 IEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAK 594

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR+ M+E+G+ K  G S IE+NGK+  F  GD+SHP    I   L  +  RL++AG++P 
Sbjct: 595 VRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPH 654

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           + +VL D++++EK+  L +HSE+LA+A+GLIST+    +R+ KNLR C +CHS  KL+SK
Sbjct: 655 IESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISK 714

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + +REI+VRD NRFH F+ G CSC D+W
Sbjct: 715 LVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  249 bits (635), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 258/518 (49%), Gaps = 45/518 (8%)

Query: 47  ELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMY 106
            L Q H  ++  GL      ++K V     +G    + YA+K FD +        ++F++
Sbjct: 86  HLNQIHAQLVVSGLVESGFLVTKFVNASWNIG---EIGYARKVFDEF-----PEPSVFLW 137

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           N++IRGYS      +AI +Y  +   G+ PD FT P VL AC+       G +VHG I +
Sbjct: 138 NAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFR 197

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
           +GF+ DVFV+N L+  Y +CG +   R VF+ + +RN+VSWTS+I    +  LP EA+ +
Sbjct: 198 LGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRI 257

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F +M +  +KP+ + +V V+ A   +++LE G  +   + ++G++    ++ +L  MY K
Sbjct: 258 FGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAK 317

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           CG V  A+  F + +  N+++ N ++S Y + G   EA+ +  EM+    R D +T+ SA
Sbjct: 318 CGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSA 377

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKT 405
           + A AQ+G L   +    Y+ +      D   NT +IDM+ KCG  ++A  +FD   +K 
Sbjct: 378 ILACAQVGSLDLAKWMGDYINKTEYRN-DVFVNTALIDMFAKCGSVDLAREVFDRTLDKD 436

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           VV W+++I G   +G             G+D                   A++LF  M  
Sbjct: 437 VVVWSAMIVGYGLHGR------------GQD-------------------AIDLFYAMKQ 465

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             +  + VT VG+ +AC + G ++    ++  ++  GI    Q    +VD+  R G    
Sbjct: 466 AGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNE 525

Query: 526 AMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
           A      M  +  VS W A +GA  +  +   GE A E
Sbjct: 526 AYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAE 563


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/771 (36%), Positives = 441/771 (57%), Gaps = 68/771 (8%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  +L    +      G  VH  I+K G    V++ N L+ FY + G +     VFDEM 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 201 ERNVVSWTSLICACARR-----------DLPK--------------------EAVYLFFE 229
            ++  SW +LI   A++           ++P                      A+++F +
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA----------------- 272
           M+ E + P+  T+  V+S+CA  Q L++G ++ +++ +LG+ +                 
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192

Query: 273 --------------NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
                         N    NAL+ +YM+ G  + A   F +  DR++V  N+++S Y + 
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252

Query: 319 GLAREALAILDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           G   EALAI  +ML + P  +PD  T+ S +SA A L  L  G+  H Y+LR   E   +
Sbjct: 253 GYNLEALAIFSKML-NEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 377 ICNTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
           + N +I MY K G  E+A  I +H   SN  ++++ SL+ G  K G+V+ ARE+F+++  
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           RD ++W  M+ G  Q  ++ +A+ELFR+M++E  + +  T+  + S    L  L+  K I
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
           +A   K G      +  AL+ M+A+ G+   A +VF     K+++ +WT+ I A+A  G 
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G++A+ LF  ML  G+KPD I +VGVL+AC+H GLV QG   +  MT++H + P + HY 
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYA 551

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CM+DL GRAGLL EA   I+SMP+EP+++ WGSLLA+C+ H+N D+A  AAER+  +DP 
Sbjct: 552 CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPG 611

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
            SG ++ L+N+Y++ GKW N A+ R  MK++G+RK  G S I +  +VH F   D  HP+
Sbjct: 612 NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQ 671

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
            + I  ++ E+   ++  G++PD  +VL D++E+ K+ +L +HSEKLA+AFGL++T +  
Sbjct: 672 KDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENT 731

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +R++KNLR+C DCHS  K +SK+  REIIVRD  RFH F+ GSCSC D+W
Sbjct: 732 ALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 263/600 (43%), Gaps = 128/600 (21%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD----------------YYIK 95
           HC I+K+GL      ++ ++   A+ G   SL +A   FD                Y  +
Sbjct: 33  HCQIIKKGLHLGVYLMNNLMTFYAKTG---SLRFAHHVFDEMPLKSTFSWNTLISGYAKQ 89

Query: 96  DN-ETSATLFM---------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
            N E S  L           + ++I GY+  GL   AI ++ ++    + P +FT   VL
Sbjct: 90  GNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVL 149

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS----- 200
           ++C  +     G ++H  +VK+G    V V   L+N Y +CGD V  + VFD M+     
Sbjct: 150 SSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNIS 209

Query: 201 --------------------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEE- 233
                                     +R++VSW S+I   +++    EA+ +F +M+ E 
Sbjct: 210 TWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEP 269

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT- 292
            +KP++ T+  ++SACA L+ L +G ++ AYI     + +  + NAL+ MY K G V+  
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329

Query: 293 --------------------------------AKQLFGECKDRNLVLCNTIMSNYVRLGL 320
                                           A+++F + +DR++V    ++  YV+ GL
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             +AL +   M+  GP P+  T+ + +S S+ L  L  G+  H   ++ G     S+ N 
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449

Query: 381 MIDMYMKCGKQEMACRIFD-HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +I MY K G   +A R+FD     K +VSW S+I  L ++G                   
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG------------------- 490

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI- 498
               LG        +EA+ LF  MLS  +K D +T VGV SAC ++G ++  +  Y  + 
Sbjct: 491 ----LG--------KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMT 538

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           E + I   +     ++D++ R G  Q A      M  + D  AW + + +  +  N + A
Sbjct: 539 EVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 290/761 (38%), Positives = 439/761 (57%), Gaps = 44/761 (5%)

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLNA 147
           A   Y  D+  +  ++ +N +I GY   G   E I  + + +   G+ PD  TFP VL A
Sbjct: 103 ALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKA 162

Query: 148 CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
           C   +   +G ++H   +K GF  DV+V   LI+ Y   G +V+ R +FDEM  R++ SW
Sbjct: 163 CRNVT---DGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSW 219

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKP-NSVTMVCVISACAKLQNLELGDRVCAYID 266
            ++I    +    KEA+ L      +G++  +SVT+V ++SAC +  +   G  + +Y  
Sbjct: 220 NAMISGYCQSGNAKEALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           + G+++   + N L+D+Y + G++   +++F     R+L+  N+I+  Y        A+ 
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIL 334

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMY 385
           +  EM L   +PD +T++S  S  +QLG++   R   G+ LR G    D +I N ++ MY
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            K G                                V+SAR VF+ +P +D ISWNT++ 
Sbjct: 395 AKLGL-------------------------------VDSARAVFNWLPNKDVISWNTIIS 423

Query: 446 GLTQENMFEEAMELFRVMLSE--RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           G  Q     EA+E++ +M  E   I  ++ T V V  AC   GAL     ++  + KNG+
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 483

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
           + D+ + T+L DM+ +CG    A+ +F ++ + +   W   I      G+GE+AV LF E
Sbjct: 484 YLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 543

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           ML +G+KPD I FV +L+ACSH GLV++G   F  M   +G++P + HYGCMVDL GRAG
Sbjct: 544 MLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAG 603

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L  AL+ IKSMP++P+  IWG+LL+AC+ H NVD+   A+E + E++PE  G HVLLSN
Sbjct: 604 QLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSN 663

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           +YASAGKW  V  +R     +G+RK PG SS+EV+ KV  F +G+++HP    +   L  
Sbjct: 664 MYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTA 723

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           ++ +L+  GYVPD   VL DV++ EK+++L  HSE+LAMAF LI+T     IR+ KNLR+
Sbjct: 724 LHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRV 783

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCHS  K +SK+ +REIIVRD+NRFH F+ G CSC D+W
Sbjct: 784 CGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 252/529 (47%), Gaps = 58/529 (10%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           PS+  LK C+ + +  + HC  LK G        + ++    + G   ++  A+  FD  
Sbjct: 157 PSV--LKACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYG---AVVNARILFDEM 211

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
              +  S     +N++I GY   G   EA++L   L       D  T   +L+ACT++  
Sbjct: 212 PTRDMGS-----WNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAGD 262

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
           F  GV +H   +K G + ++FV N LI+ Y E G + D ++VFD M  R+++SW S+I A
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKA 322

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
               + P  A+ LF EM    I+P+ +T++ + S  ++L  +    R C  +    ++  
Sbjct: 323 YELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEI----RACRSVQGFTLRKG 378

Query: 274 ALMV-----NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
             +      NA+V MY K G VD+A+ +F    +++++  NTI+S Y + G A EA+ + 
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMY 438

Query: 329 DEMLLHGPR--PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           + M   G     ++ T +S + A +Q G L  G   HG +L+NGL     +  ++ DMY 
Sbjct: 439 NIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYG 498

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG+ + A  +F  +     V WN+LIA    +G  E A  +F E               
Sbjct: 499 KCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE--------------- 543

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHC 505
                           ML E +K D +T V + SAC + G +D  +W +  ++ + GI  
Sbjct: 544 ----------------MLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITP 587

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            ++    +VD++ R G  + A+   + M  + D S W A + A  + GN
Sbjct: 588 SLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGN 636



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 232/495 (46%), Gaps = 46/495 (9%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  +V     ++V +   L+N Y   G++   R  FD +  R+V +W  +I    R   
Sbjct: 73  LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGY 132

Query: 220 PKEAVYLF-FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             E +  F   M+  G++P+  T   V+ AC   +N+  G+++     + G   +  +  
Sbjct: 133 SSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAA 189

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L+ +Y + GAV  A+ LF E   R++   N ++S Y + G A+EAL + D     G R 
Sbjct: 190 SLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSD-----GLRA 244

Query: 339 -DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            D VT++S +SA  + GD   G   H Y +++GLE    + N +ID+Y + G  +   ++
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKV 304

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD M  + ++SWNS+I     N           E P R                    A+
Sbjct: 305 FDRMYVRDLISWNSIIKAYELN-----------EQPLR--------------------AI 333

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDM 516
            LF+ M   RI+ D +T++ +AS    LG +   + +  +  + G    D+ +  A+V M
Sbjct: 334 LLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG--IKPDSI 574
           +A+ G    A  VF  +  +DV +W   I   A  G   +A+E++N M  +G  I  +  
Sbjct: 394 YAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQG 453

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            +V VL ACS  G + QG  L   +   +G+   +     + D+ G+ G L +AL L   
Sbjct: 454 TWVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVGTSLADMYGKCGRLDDALSLFYQ 512

Query: 635 MPVEPNDVIWGSLLA 649
           +P   N V W +L+A
Sbjct: 513 IP-RVNSVPWNTLIA 526



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 186/436 (42%), Gaps = 76/436 (17%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD-EM 331
           N  +   LV++Y   G V  A+  F    +R++   N ++S Y R G + E +      M
Sbjct: 85  NVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFM 144

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
           L  G +PD  T  S + A   + D   G   H   L+ G          M D+Y+     
Sbjct: 145 LSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGF---------MWDVYVAASLI 192

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
            + CR                       G V +AR +F EMP RD  SWN M+ G  Q  
Sbjct: 193 HLYCRY----------------------GAVVNARILFDEMPTRDMGSWNAMISGYCQSG 230

Query: 452 MFEEAMELFRVMLSERIK-VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
             +EA+      LS+ ++ +D VT+V + SAC   G  +    I++Y  K+G+  ++ ++
Sbjct: 231 NAKEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
             L+D++A  G  +   +VF RM  RD+ +W + I A  +     +A+ LF EM    I+
Sbjct: 286 NKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQ 345

Query: 571 PDSIVFV---------GVLTACS--HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           PD +  +         G + AC    G  + +GW L     DI   +  +V Y       
Sbjct: 346 PDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFL----EDITIGNAVVVMY------- 394

Query: 620 GRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
            + GL+  A  +   +P    DVI W ++++   ++     A+ A E    ++ E     
Sbjct: 395 AKLGLVDSARAVFNWLP--NKDVISWNTIISGYAQN---GFASEAIEMYNIMEEEG---- 445

Query: 679 VLLSNIYASAGKWTNV 694
                I A+ G W +V
Sbjct: 446 ---GEISANQGTWVSV 458



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 13/174 (7%)

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           Y   L  AK ++A +  +    ++ ++  LV+++   G+   A   F  +  RDV AW  
Sbjct: 63  YCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNL 122

Query: 544 AIGAMAMEGNGEQAVELFN-EMLRQGIKPDSIVFVGVLTAC---SHGGLVNQGWHLFRSM 599
            I      G   + +  F+  ML  G++PD   F  VL AC   + G  ++     F  M
Sbjct: 123 MISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFGFM 182

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA-CQ 652
            D++ V+  ++H  C      R G +  A  L   MP       W ++++  CQ
Sbjct: 183 WDVY-VAASLIHLYC------RYGAVVNARILFDEMPTRDMGS-WNAMISGYCQ 228


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 283/709 (39%), Positives = 413/709 (58%), Gaps = 35/709 (4%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R+ F  N L++ Y + G + D   VF EM +R+ VSWT +I    R     +AV  F +M
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
           V EG  P+  T+  V+S+CA ++   +G +V  ++ +LG+ +   + N+++ MY KCG  
Sbjct: 339 VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDA 398

Query: 291 DTAKQLFGECK-------------------------------DRNLVLCNTIMSNYVRLG 319
           +TA+ +F   +                               +R++V  NTI++ Y + G
Sbjct: 399 ETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG 458

Query: 320 LAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           L   AL     ML      PD  T+ S +SA A L  L  G+  H Y+LR G+     I 
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIM 518

Query: 379 NTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           N +I  Y K G  E A RI D   +++  V+S+ +L+ G +K GD + ARE+F  M  RD
Sbjct: 519 NALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRD 578

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            I+W  M+ G  Q    +EAMELFR M+    + +  T+  V SAC  L  LD  K I+ 
Sbjct: 579 VIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHC 638

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGE 555
              ++     + ++ A++ ++AR G    A +VF ++  +++   WT+ I AMA  G GE
Sbjct: 639 KAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGE 698

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           QAV LF EM+R G+KPD I +VGVL+AC+H G V++G   +  M + HG+ PQ+ HY CM
Sbjct: 699 QAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACM 758

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDL  RAGLL EA + I+ MPV P+ V+WGSLLAAC+  +N D+A  AA ++  +DP  S
Sbjct: 759 VDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNS 818

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G +  L+N+Y++ G+W + AR+    K++G++K  G S   V GKVH F + D  HP+ +
Sbjct: 819 GAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRD 878

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
           +I     EM   ++ AG+VPDL +VL DVD++ K+ LLS HSEKLA+AFGLIST +   +
Sbjct: 879 SIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 938

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R++KNLR+C DCH+  K +SK  DREIIVRD  RFH FR G CSC D+W
Sbjct: 939 RIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 12/257 (4%)

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK-----QEMACRIFDHM--SNKTVVSWN 410
            GR  H + ++ GL     +CN ++  Y   G      +E  C +FD +  + +   +WN
Sbjct: 227 AGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARC-LFDDIPYARRNAFTWN 285

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           SL++   K+G +  A  VF+EMP RD +SW  M+ GL +   F +A++ F  M+SE    
Sbjct: 286 SLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAP 345

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
            + T+  V S+C  + A  + + ++ ++ K G+   + +A +++ M+ +CGD + A  VF
Sbjct: 346 SQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVF 405

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
            RM+ R VS+W   +     +G  E AV +F  M+ + I    + +  ++   +  GL  
Sbjct: 406 ERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VSWNTIIAGYNQNGLDG 461

Query: 591 QGWHLFRSMTDIHGVSP 607
                F  M     + P
Sbjct: 462 MALKFFSRMLSASSMEP 478



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 33/287 (11%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY-------- 92
           N + L   KQ H +IL+ G+      ++ ++ T A+ G+ E+   A++  D         
Sbjct: 492 NLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVET---ARRIMDQAVVADLNV 548

Query: 93  ---------YIK--DNETSATLF---------MYNSLIRGYSCIGLGVEAISLYVELAGF 132
                    Y+K  D + +  +F          + ++I GY   G   EA+ L+  +   
Sbjct: 549 ISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILI 608

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G  P+  T   VL+AC   +    G Q+H   ++   ++ V V N +I  Y   G +   
Sbjct: 609 GPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLA 668

Query: 193 RRVFDEMSERN-VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
           RRVFD++  R   ++WTS+I A A+  L ++AV LF EMV  G+KP+ +T V V+SACA 
Sbjct: 669 RRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAH 728

Query: 252 LQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
              ++ G R    + +E G+         +VD++ + G +  A +  
Sbjct: 729 AGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFI 775


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 285/739 (38%), Positives = 420/739 (56%), Gaps = 70/739 (9%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSER 202
           LN   K        Q+H  I+K G    +F ++ LI F       D+     +F  +  +
Sbjct: 29  LNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88

Query: 203 --NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
             N+  W +LI A +    P  +++LF +M+  G+ PNS T   +  +CAK +      +
Sbjct: 89  PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148

Query: 261 VCAYIDELGMK-------------------------------ANALMVNALVDMYMKCGA 289
           + A+  +L +                                 +A+   AL+  Y+  G 
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           VD A++LF E   +++V  N +++ YV+ G   EALA    M      P++ TM+S +SA
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
              L  L  G+    +V   G      + N ++DMY KCG                    
Sbjct: 269 CGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCG-------------------- 308

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                      ++ +AR++F  M  +D I WNTM+GG    +++EEA+ LF VML E + 
Sbjct: 309 -----------EIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVT 357

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKN----GIHCDMQLATALVDMFARCGDPQR 525
            + VT + V  AC  LGALDL KW++AYI+KN    G   ++ L T+++ M+A+CG  + 
Sbjct: 358 PNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEV 417

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A QVFR M  R +++W A I  +AM G+ E+A+ LF EM+ +G +PD I FVGVL+AC+ 
Sbjct: 418 AEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQ 477

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G V  G   F SM   +G+SP++ HYGCM+DLL R+G   EA  L+ +M +EP+  IWG
Sbjct: 478 AGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWG 537

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           SLL AC+ H  V+   Y AER+ EL+PE SG +VLLSNIYA AG+W +VA++R ++ ++G
Sbjct: 538 SLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKG 597

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K+PG +SIE++G VHEF  GD+ HP+  NI  ML E++  L + G+VPD + VL D+D
Sbjct: 598 MKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMD 657

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+ K+  L+ HSEKLA+AFGLIST     IR+VKNLR+C +CHS  KL+SK+++REII R
Sbjct: 658 EEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIAR 717

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH F+ G CSC+D W
Sbjct: 718 DRNRFHHFKDGFCSCNDRW 736



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 176/594 (29%), Positives = 284/594 (47%), Gaps = 77/594 (12%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           L+ P V  L +        ++ P +  L  C  +  LKQ H  I+K GL +     SK++
Sbjct: 5   LSPPFVHFLPSSDPPYKLLENHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLI 64

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
             CA +     L+YA   F      +     +F++N+LIR +S       ++ L+ ++  
Sbjct: 65  EFCA-LSPSRDLSYALSLFHSI---HHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLH 120

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD--- 188
            G+ P+  TFP +  +C KS A  E  Q+H   +K+       V   LI+ Y + G+   
Sbjct: 121 SGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRH 180

Query: 189 ----------------------------IVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
                                       + D RR+FDE+  ++VVSW ++I    +    
Sbjct: 181 ARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRF 240

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           +EA+  F  M E  + PN  TMV V+SAC  L++LELG  + +++ + G   N  +VNAL
Sbjct: 241 EEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNAL 300

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           VDMY KCG + TA++LF   +D++++L NT++  Y  L L  EAL + + ML     P+ 
Sbjct: 301 VDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPND 360

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN-----TMIDMYMKCGKQEMAC 395
           VT L+ + A A LG L  G+  H Y+ +N L+G  ++ N     ++I MY KCG  E+A 
Sbjct: 361 VTFLAVLPACASLGALDLGKWVHAYIDKN-LKGTGNVNNVSLWTSIIVMYAKCGCVEVAE 419

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           ++F  M ++++ SWN++I+GL  NG                                 E 
Sbjct: 420 QVFRSMGSRSLASWNAMISGLAMNGHA-------------------------------ER 448

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALV 514
           A+ LF  M++E  + D +T VGV SAC   G ++L    ++ + K+ GI   +Q    ++
Sbjct: 449 ALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMI 508

Query: 515 DMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           D+ AR G    A  +   ME + D + W + + A  + G    GE   E   E+
Sbjct: 509 DLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFEL 562



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 209/466 (44%), Gaps = 50/466 (10%)

Query: 2   ALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNC---KTLNELKQPHCHILKQ 58
           A +L P+P    T ++   +    +   P         K+C   K  +E KQ H H LK 
Sbjct: 101 AHSLTPTP----TSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKL 156

Query: 59  GLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM------------- 105
            L   P   + ++   +Q+G    L +A+  FD     +  S T  +             
Sbjct: 157 ALHLHPHVHTSLIHMYSQVG---ELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDAR 213

Query: 106 -------------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
                        +N++I GY   G   EA++ +  +    + P++ T   VL+AC    
Sbjct: 214 RLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLR 273

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
           +   G  +   +   GF +++ + N L++ Y +CG+I   R++FD M +++V+ W ++I 
Sbjct: 274 SLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIG 333

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE----L 268
                 L +EA+ LF  M+ E + PN VT + V+ ACA L  L+LG  V AYID+     
Sbjct: 334 GYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGT 393

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G   N  +  +++ MY KCG V+ A+Q+F     R+L   N ++S     G A  AL + 
Sbjct: 394 GNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLF 453

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMID 383
           +EM+  G +PD +T +  +SA  Q G +  G      M   Y +   L+ +      MID
Sbjct: 454 EEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHY----GCMID 509

Query: 384 MYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREV 428
           +  + GK + A  +  +M        W SL+     +G VE    V
Sbjct: 510 LLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYV 555


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 274/689 (39%), Positives = 414/689 (60%), Gaps = 43/689 (6%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGE--CGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H   +K       FV + L+  Y +    D+   R +FD +  R+++ W ++I     
Sbjct: 31  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
                + + LF E+V E + P++ T+ CVI  CA+L  ++ G ++     ++G  ++  +
Sbjct: 91  NQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 149

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             +LV+MY KCG +D A+++F    D+++VL N+++  Y R G    AL + +EM     
Sbjct: 150 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM----- 204

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            P+R     A S +               VL +GL               KCGK E A +
Sbjct: 205 -PER----DAFSWT---------------VLVDGLS--------------KCGKVESARK 230

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +FD M  + +VSWN++I G +K+GD +SA E+F +MP  D ++WN M+ G      F +A
Sbjct: 231 LFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDA 290

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +++F +ML    +    T+V V SA   L  L   +WI++Y+EKNG   D  L T+L++M
Sbjct: 291 VKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEM 350

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +A+CG  + A+ VFR ++K+ V  WTA I  + + G    A+ LF EM + G+KP++I+F
Sbjct: 351 YAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIF 410

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVL AC+H GLV+ G   F  M + + + P + HYGC+VD+L RAG L EA + I++MP
Sbjct: 411 IGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMP 470

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           + PN VIW SLL   + H  +DI  YAA+R+ E+ PE  G ++LLSN+YA++G W  V+ 
Sbjct: 471 ISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSH 530

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR  M ++G RK PG SS+E  G +HEF  GD SHP+   I + + EM  +L+  G+VPD
Sbjct: 531 VREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPD 590

Query: 757 LTNVLLDVD-EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
            T VLL ++ E+EK+  L +HSE+LA+AFGLI+    +PIR++KNLR+C DCHS  KL+S
Sbjct: 591 TTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLS 650

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+Y REIIVRDN RFH F+ GSCSC D+W
Sbjct: 651 KIYSREIIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 242/534 (45%), Gaps = 56/534 (10%)

Query: 46  NELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
            E++Q H   LK  + + P ++S  +           L YA+  FD   +      +L  
Sbjct: 27  QEVEQLHAFSLKTAIFNHP-FVSSRLLALYSDPKINDLGYARSIFDRIQR-----RSLIH 80

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I+ Y       + I L+ EL     LPD FT P V+  C +     EG Q+HG  +
Sbjct: 81  WNTIIKCYVENQFSHDGIVLFHELV-HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLAL 139

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+GF  DVFV+  L+N Y +CG+I   R+VFD M +++VV W SLI   AR      A+ 
Sbjct: 140 KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQ 199

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF EM E      +V +V  +S C K+++           D++  + N +  NA+++ YM
Sbjct: 200 LFEEMPERDAFSWTV-LVDGLSKCGKVESAR------KLFDQMPCR-NLVSWNAMINGYM 251

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G  D+A +LF +    +LV  N +++ Y   G   +A+ +   ML  G RP   T++S
Sbjct: 252 KSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVS 311

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +SA + L  L  GR  H Y+ +NG E    +  ++I+MY KCG  E A  +F  +  K 
Sbjct: 312 VLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKK 371

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V  W ++I GL  +G                               M   A+ LF  M  
Sbjct: 372 VGHWTAIIVGLGIHG-------------------------------MANHALALFLEMCK 400

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQ 524
             +K + +  +GV +AC + G +D  +  +   + +  I   ++    LVD+  R G  +
Sbjct: 401 TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLE 460

Query: 525 RAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEMLRQGIKPDSI 574
            A      M    +   W + +G     G    GE A +   E     + P++I
Sbjct: 461 EAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIE-----VAPETI 509


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 272/709 (38%), Positives = 416/709 (58%), Gaps = 35/709 (4%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R+VF  N L++ + + G + D R VF EM ER+ VSWT ++    R     EA+    +M
Sbjct: 96  RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
             +G  P   T+  V+S+CA  Q   +G +V +++ +LG+ +   + N++++MY KCG  
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDA 215

Query: 291 DTA-------------------------------KQLFGECKDRNLVLCNTIMSNYVRLG 319
           +TA                               + LF     R++V  N +++ Y + G
Sbjct: 216 ETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275

Query: 320 LAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           L  +AL +   ML      PD  T+ S +SA A LG++  G+  H Y+LR  +     + 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 379 NTMIDMYMKCGKQEMACRIFDHM--SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           N +I  Y K G  E A RI D    ++  V+S+ +L+ G +K GD+ESARE+F  M  RD
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            ++W  M+ G  Q    +EA++LFR M++   + +  T+  V S C  L  LD  K I+ 
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGE 555
              ++ +     ++ A++ M+AR G    A ++F ++  +++   WT+ I A+A  G GE
Sbjct: 456 RAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +AV LF EMLR G++PD I +VGVL+ACSH G VN+G   +  + + H ++P++ HY CM
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLL RAGL  EA + I+ MPVEP+ + WGSLL+AC+ H+N ++A  AAE++  +DP  S
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G +  ++N+Y++ G+W++ AR+    KE+ +RK  G S   +  K+H F + D  HP+ +
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            + +M   M   ++ AG+VPDL +VL DVD++ K+ LLS HSEKLA+AFGLIST +   +
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           RV+KNLR+C DCH+  K +SKV DREIIVRD  RFH FR G CSC D+W
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 232/528 (43%), Gaps = 100/528 (18%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +  ++ G +  G   EAI   +++   G  P +FT   VL++C  + A   G +VH  +V
Sbjct: 132 WTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVV 191

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV--------------------- 204
           K+G    V V N ++N YG+CGD      VF+ M  R+V                     
Sbjct: 192 KLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAES 251

Query: 205 ----------VSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQ 253
                     VSW ++I    +  L  +A+ LF  M+ E  + P+  T+  V+SACA L 
Sbjct: 252 LFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLG 311

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV----------------------- 290
           N+ +G +V AYI    M  N+ + NAL+  Y K G+V                       
Sbjct: 312 NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTAL 371

Query: 291 ----------DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                     ++A+++FG   +R++V    ++  Y + G   EA+ +   M+  GP P+ 
Sbjct: 372 LEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNS 431

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T+ + +S  A L  L  G+  H   +R+ LE   S+ N +I MY + G    A R+FD 
Sbjct: 432 YTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQ 491

Query: 401 MS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
           +   K  ++W S+I  L ++G                                 EEA+ L
Sbjct: 492 VCWRKETITWTSMIVALAQHGQ-------------------------------GEEAVGL 520

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFA 518
           F  ML   ++ DR+T VGV SAC + G ++  K  Y  I+ ++ I  +M     +VD+ A
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           R G    A +  RRM  + D  AW + + A  +  N E A EL  E L
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA-ELAAEKL 627



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 201/426 (47%), Gaps = 38/426 (8%)

Query: 265 IDELGM-KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            DE+ + + N    N+L+ M+ K G +  A+ +F E  +R+ V    ++    R G   E
Sbjct: 88  FDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE 147

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           A+  L +M   G  P + T+ + +S+ A       GR  H +V++ GL     + N++++
Sbjct: 148 AIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN 207

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG  E A  +F+ M  ++V SWN++++     G ++ A  +F  MPGR  +SWN M
Sbjct: 208 MYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAM 267

Query: 444 LGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           + G  Q  +  +A++LF  ML E  +  D  T+  V SAC  LG + + K ++AYI +  
Sbjct: 268 IAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTE 327

Query: 503 IHCDMQLATALVDMFARC---------------------------------GDPQRAMQV 529
           +  + Q+  AL+  +A+                                  GD + A ++
Sbjct: 328 MAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREM 387

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M  RDV AWTA I      G  ++A++LF  M+  G +P+S     VL+ C+    +
Sbjct: 388 FGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACL 447

Query: 590 NQGWHLF-RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + G  +  R++  +   S  + +   ++ +  R+G    A  +   +      + W S++
Sbjct: 448 DYGKQIHCRAIRSLLERSSSVSN--AIITMYARSGSFPWARRMFDQVCWRKETITWTSMI 505

Query: 649 AACQKH 654
            A  +H
Sbjct: 506 VALAQH 511



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 168/382 (43%), Gaps = 68/382 (17%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
           ++  +N++I GY+  GL  +A+ L+   L    + PD+FT   VL+AC        G QV
Sbjct: 260 SIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQV 319

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE---------------------- 198
           H  I++     +  V N LI+ Y + G + + RR+ D+                      
Sbjct: 320 HAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIG 379

Query: 199 -----------MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                      M+ R+VV+WT++I    +     EA+ LF  M+  G +PNS T+  V+S
Sbjct: 380 DMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 439

Query: 248 ACAKLQNLELGDRV-CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNL 305
            CA L  L+ G ++ C  I  L ++ ++ + NA++ MY + G+   A+++F + C  +  
Sbjct: 440 VCASLACLDYGKQIHCRAIRSL-LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 498

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           +   +++    + G   EA+ + +EML  G  PDR+T +  +SA +  G           
Sbjct: 499 ITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG----------- 547

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
            +  G   +D I N                   +H     +  +  ++  L + G    A
Sbjct: 548 FVNEGKRYYDQIKN-------------------EHQIAPEMSHYACMVDLLARAGLFSEA 588

Query: 426 REVFSEMPGR-DHISWNTMLGG 446
           +E    MP   D I+W ++L  
Sbjct: 589 QEFIRRMPVEPDAIAWGSLLSA 610



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 176/427 (41%), Gaps = 93/427 (21%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           H++   P +      L  C  L  +   KQ H +IL+  + +     + ++ T A+ G+ 
Sbjct: 289 HESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSV 348

Query: 81  ESLTYAQKAFDY-----------------YIK--DNETSATLF---------MYNSLIRG 112
           E+   A++  D                  Y+K  D E++  +F          + ++I G
Sbjct: 349 EN---ARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 405

Query: 113 YSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD 172
           Y   G   EAI L+  +   G  P+ +T   VL+ C   +    G Q+H   ++   +R 
Sbjct: 406 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERS 465

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERN-VVSWTSLICACARRDLPKEAVYLFFEMV 231
             V N +I  Y   G     RR+FD++  R   ++WTS+I A A+    +EAV LF EM+
Sbjct: 466 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 525

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
             G++P+ +T V V+SAC+                                     G V+
Sbjct: 526 RAGVEPDRITYVGVLSACS-----------------------------------HAGFVN 550

Query: 292 TAKQLFGECKDRNLVLCNTIMSNY-------VRLGLAREALAILDEMLLHGPRPDRV--- 341
             K+ + + K+ + +     MS+Y        R GL  EA   +  M +    PD +   
Sbjct: 551 EGKRYYDQIKNEHQIAPE--MSHYACMVDLLARAGLFSEAQEFIRRMPVE---PDAIAWG 605

Query: 342 TMLSA--VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           ++LSA  V  +A+L +L   ++    +  N    + +I N    +Y  CG+   A RI+ 
Sbjct: 606 SLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIAN----VYSACGRWSDAARIWK 659

Query: 400 HMSNKTV 406
               K V
Sbjct: 660 ARKEKAV 666


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 279/754 (37%), Positives = 435/754 (57%), Gaps = 66/754 (8%)

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G  +H  I+K G    VF+ N L+NFY + G I D  RVFDEM  ++V SW  ++   A+
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 217 -----------RDLPK--------------------EAVYLFFEMVEEGIKPNSVTMVCV 245
                       ++P+                     A+ +F EMV + + P   T+  V
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY--------------------- 284
           +++CA ++ L +G +V +++ + G+ +   + N+L++MY                     
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211

Query: 285 ----------MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL- 333
                     M+ G VD A+  F +  +R++V  N ++S Y + G  REAL I  +ML+ 
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
              +PD+ T+ SA+SA A L +L  G+  H +++R   + + ++ N +I MY K G  E+
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331

Query: 394 ACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           A +I +   +SN  V+++ +L+ G +K GD+  AR +F  +  RD ++W  M+ G  Q  
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
             ++AMELFR M+ E  K +  T+  + S    L +LD  + I+A   ++G    + ++ 
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSN 451

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           AL+ M+A+ G    A  VF  +  KRD   WT+ I A+A  G GE+A+ LF  ML  GIK
Sbjct: 452 ALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIK 511

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD I +VGVL+AC+H GLV QG   +  M + H + P   HY CM+DL GRAGLL EA  
Sbjct: 512 PDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHA 571

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            I++MP+EP+ + WGSLLA+C+ H+NV++A  AAER+  ++PE SG +  L+N+Y++ G+
Sbjct: 572 FIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQ 631

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W N A +R  MK++G++K  G S +++  KVH F   D  HP+ + I  M+ ++   ++ 
Sbjct: 632 WENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKK 691

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            G+VPD  +VL D++E+ K+ +LSHHSEKLA+AFGLI T +   +R++KNLR+C DCHS 
Sbjct: 692 MGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSA 751

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +SK+  REIIVRD  RFH F+ G CSC D+W
Sbjct: 752 IKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 158/335 (47%), Gaps = 41/335 (12%)

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S +  S +  D   G+  H  +++ GL     + N +++ Y K G    A R+FD M  K
Sbjct: 18  SFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVK 77

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
           +V SWN +++G  K G +E A  VF EMP  D +SW  M+ G  Q   FE A+ +FR M+
Sbjct: 78  SVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           S+ +   + T+  V ++C  +  L + + +++++ K+G+   + +A +L++M+A+ GDP 
Sbjct: 138 SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPV 197

Query: 525 RAMQVFRRME-------------------------------KRDVSAWTAAIGAMAMEGN 553
            A  VF RM+                               +RDV +W A I      G 
Sbjct: 198 TAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGF 257

Query: 554 GEQAVELFNEML-RQGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRSMTDIHGVSPQ 608
             +A+++F++ML     KPD       L+AC++   +  G     H+ R+  D  G    
Sbjct: 258 DREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN 317

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
                 ++ +  ++G +  A  +I+   +   DVI
Sbjct: 318 -----ALISMYSKSGGVEIAQKIIEQSMISNLDVI 347


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/709 (39%), Positives = 412/709 (58%), Gaps = 35/709 (4%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R+ F  N L++ Y + G + D R VF +M ER+ VSWT ++    R     +AV  F +M
Sbjct: 95  RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
           V EG+ P+   +  V+S+CA  +   +G +V +++ +LG+ +   + N+++ MY KCG  
Sbjct: 155 VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDA 214

Query: 291 DTAKQLFGECK-------------------------------DRNLVLCNTIMSNYVRLG 319
           +TA+ +F   K                               +R++V  N I++ Y + G
Sbjct: 215 ETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNG 274

Query: 320 LAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           L   AL     ML      PD  T+ S +SA A L  L  G+  H Y+LR G+     I 
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334

Query: 379 NTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           N +I  Y K G  E A RI D   +++  V+S+ +L+ G +K GD + AREVF  M  RD
Sbjct: 335 NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRD 394

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            I+W  M+ G  Q    +EAMELFR M+    + +  T+  V SAC  L  L   K I+ 
Sbjct: 395 VIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHC 454

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGE 555
              ++     + ++ A++ ++AR G    A +VF ++  +++   WT+ I A+A  G GE
Sbjct: 455 RAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGE 514

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           QA+ LF EMLR G+KPD + ++GV +AC+H G +++G   +  M + HG+ P++ HY CM
Sbjct: 515 QAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACM 574

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLL RAGLL EA + I+ MPV P+ V+WGSLLAAC+  +N D+A  AAE++  +DP+ S
Sbjct: 575 VDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNS 634

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G +  L+N+Y++ G+W + AR+    K++ ++K  G S   V  KVH F + D  HP+ +
Sbjct: 635 GAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRD 694

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            I     EM   ++ AG+VPDL +VL DVD++ K+ LLS HSEKLA+AFGLIST +   +
Sbjct: 695 AICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 754

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R++KNLR+C DCH+  K +SKV DREIIVRD  RFH FR G CSC D+W
Sbjct: 755 RIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 156/599 (26%), Positives = 259/599 (43%), Gaps = 105/599 (17%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +  ++ G +  G   +A+  ++++ G G+ P +F    VL++C  + A G G +VH  ++
Sbjct: 131 WTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVI 190

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS------------------------- 200
           K+G    V V N ++  YG+CGD    R VF+ M                          
Sbjct: 191 KLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALS 250

Query: 201 ------ERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQ 253
                 ER++VSW ++I    +  L   A+  F  M+    ++P+  T+  V+SACA L+
Sbjct: 251 MFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLR 310

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC--KDRNLVLCNTI 311
            L++G ++ +YI   GM  ++ ++NAL+  Y K G+V+TA+++  +    D N++    +
Sbjct: 311 MLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTAL 370

Query: 312 MSNYVRLGLAREALAILD-------------------------------EMLLHGPRPDR 340
           +  YV+LG  ++A  + D                                M+  GP P+ 
Sbjct: 371 LEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNS 430

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T+ + +SA A L  L  G+  H   +R+  E   S+ N +I +Y + G   +A R+FD 
Sbjct: 431 HTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQ 490

Query: 401 MS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
           +   K  V+W S+I  L ++G                       LG        E+A+ L
Sbjct: 491 ICWRKETVTWTSMIVALAQHG-----------------------LG--------EQAIVL 519

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFA 518
           F  ML   +K DRVT +GV SAC + G +D  K  Y   + ++GI  +M     +VD+ A
Sbjct: 520 FEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLA 579

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS---- 573
           R G    A +  +RM    D   W + + A  +  N + A EL  E L   I PD+    
Sbjct: 580 RAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLA-ELAAEKL-LSIDPDNSGAY 637

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
                V +AC       + W L +             H    V + G   +L    D I
Sbjct: 638 SALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAI 696



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 196/419 (46%), Gaps = 37/419 (8%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           + NA   N+L+ MY K G +  A+ +F +  +R+ V    ++    R G   +A+    +
Sbjct: 94  RRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLD 153

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M+  G  P +  + + +S+ A       GR  H +V++ GL     + N+++ MY KCG 
Sbjct: 154 MVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGD 213

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A  +F+ M  ++  SWN++++     G ++ A  +F  M  R  +SWN ++ G  Q 
Sbjct: 214 AETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQN 273

Query: 451 NMFEEAMELF-RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
            + + A++ F R++ +  ++ D  T+  V SAC  L  L + K +++YI + G+    Q+
Sbjct: 274 GLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQI 333

Query: 510 ATALVDMFARC---------------------------------GDPQRAMQVFRRMEKR 536
             AL+  +A+                                  GD ++A +VF  M  R
Sbjct: 334 MNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR 393

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           DV AWTA I      G  ++A+ELF  M+R G +P+S     VL+AC+    +  G  + 
Sbjct: 394 DVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIH 453

Query: 597 -RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            R++  +   S  + +   ++ +  R+G +  A  +   +      V W S++ A  +H
Sbjct: 454 CRAIRSLQEQSVSVSN--AIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQH 510



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 171/368 (46%), Gaps = 43/368 (11%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAF 154
           +N    ++  +N++I GY+  GL   A+  +   L    + PD+FT   VL+AC      
Sbjct: 253 ENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRML 312

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR-------------------- 194
             G Q+H  I++ G      + N LI+ Y + G +   RR                    
Sbjct: 313 KMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLE 372

Query: 195 -------------VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
                        VFD M+ R+V++WT++I    +     EA+ LF  M+  G +PNS T
Sbjct: 373 GYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHT 432

Query: 242 MVCVISACAKLQNLELGDRV-CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE- 299
           +  V+SACA L  L  G ++ C  I  L  + +  + NA++ +Y + G+V  A+++F + 
Sbjct: 433 LAAVLSACASLAYLGYGKQIHCRAIRSL-QEQSVSVSNAIITVYARSGSVPLARRVFDQI 491

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
           C  +  V   +++    + GL  +A+ + +EML  G +PDRVT +   SA    G +  G
Sbjct: 492 CWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKG 551

Query: 360 RMCHGYVL-RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM--SNKTVVSWNSLIAG- 415
           +  +  +L  +G+    S    M+D+  + G    A      M  +  TVV W SL+A  
Sbjct: 552 KRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVV-WGSLLAAC 610

Query: 416 -LIKNGDV 422
            + KN D+
Sbjct: 611 RVRKNADL 618



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 127/256 (49%), Gaps = 10/256 (3%)

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE----MACRIFDHM--SNKTVVSWNS 411
            GR  H + ++ GL     +CN ++  Y + G        A R+FD +  + +   +WNS
Sbjct: 43  AGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNS 102

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           L++   K+G +  AR VF++MP RD +SW  M+ GL +   F +A++ F  M+ E +   
Sbjct: 103 LLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPS 162

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           +  +  V S+C    A  + + +++++ K G+   + +A +++ M+ +CGD + A  VF 
Sbjct: 163 QFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 222

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
           RM+ R  S+W A +     +G  + A+ +F  M  + I    + +  ++   +  GL + 
Sbjct: 223 RMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI----VSWNAIIAGYNQNGLDDM 278

Query: 592 GWHLFRSMTDIHGVSP 607
               F  M     + P
Sbjct: 279 ALKFFSRMLTASSMEP 294



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 33/287 (11%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY-------- 92
           N + L   KQ H +IL+ G+ +    ++ ++ T A+ G+ E+   A++  D         
Sbjct: 308 NLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVET---ARRIMDKAVVADLNV 364

Query: 93  ---------YIK--DNETSATLF---------MYNSLIRGYSCIGLGVEAISLYVELAGF 132
                    Y+K  D + +  +F          + ++I GY   G   EA+ L+  +   
Sbjct: 365 ISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRS 424

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G  P+  T   VL+AC   +  G G Q+H   ++   ++ V V N +I  Y   G +   
Sbjct: 425 GPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLA 484

Query: 193 RRVFDEMSERN-VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
           RRVFD++  R   V+WTS+I A A+  L ++A+ LF EM+  G+KP+ VT + V SAC  
Sbjct: 485 RRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTH 544

Query: 252 LQNLELGDRVC-AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
              ++ G R     ++E G+         +VD+  + G +  A +  
Sbjct: 545 AGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFI 591


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/763 (34%), Positives = 451/763 (59%), Gaps = 12/763 (1%)

Query: 88   KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
            K FD   + N+ +     +NS+I   +  G   +A+ L++ +   G   ++F    +L A
Sbjct: 332  KVFDEMGERNQVT-----WNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMA 386

Query: 148  CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
                +  G+G ++HG +V+   + D+ + + L++ Y +CG + +  +VF  + ERN VS+
Sbjct: 387  SAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSY 446

Query: 208  TSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
             +L+    +    +EA+ L+ +M  E+GI+P+  T   +++ CA  +N   G ++ A++ 
Sbjct: 447  NALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 506

Query: 267  ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
               +  N ++   LV MY +CG ++ AK++F    +RN    N+++  Y + G  +EAL 
Sbjct: 507  RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 566

Query: 327  ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
            +  +M L+G +PD  ++ S +S+   L D   GR  H +++RN +E    +   ++DMY 
Sbjct: 567  LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYA 626

Query: 387  KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
            KCG  + A +++D    K V+  N +++  + +G    A+ +F +M  R+   WN++L G
Sbjct: 627  KCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAG 686

Query: 447  LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHC 505
               + + +E+   F  ML   I+ D +TMV + + C  L AL+    +++ I K G ++C
Sbjct: 687  YANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNC 746

Query: 506  DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
             + L TALVDM+++CG   +A  VF  M  +++ +W A I   +  G  ++A+ L+ EM 
Sbjct: 747  SVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMP 806

Query: 566  RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
            ++G+ P+ + F+ +L+ACSH GLV +G  +F SM + + +  +  HY CMVDLLGRAG L
Sbjct: 807  KKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRL 866

Query: 626  GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
             +A + ++ MP+EP    WG+LL AC+ H+++D+   AA+R+ ELDP+  G +V++SNIY
Sbjct: 867  EDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIY 926

Query: 686  ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
            A+AG+W  V  +R  MK +G++K PG S IE+N ++  F +G ++HP+   I + LR + 
Sbjct: 927  AAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLT 986

Query: 746  CRLRDAGYVPDLTNVLLDVDE----QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
             + +  GY+PD + +L +V +    +E++YLL  HSE+LA++ GLIS  K   IRV KNL
Sbjct: 987  LQSKGLGYIPDTSFILQNVKDIKEEEEEEYLL-QHSERLALSLGLISLPKKSTIRVFKNL 1045

Query: 802  RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            R+C DCH+  K +SK+  R II RD NRFH F  G CSC D+W
Sbjct: 1046 RICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 278/573 (48%), Gaps = 40/573 (6%)

Query: 14  TPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKV 70
           +P  T++  +  +   P    S+  +++C   N     K  H  ++  G       ++K+
Sbjct: 55  SPKPTSIHTKPASDVNPLPYSSL--IQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKI 112

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           +   A+ G  + L YA+K F+   + N T+     +N++I  Y+ +   +E + LY  + 
Sbjct: 113 LMLYARSGCLDDLCYARKLFEEMPERNLTA-----WNTMILAYARVDDYMEVLRLYGRMR 167

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G   DKFTFP V+ AC      G   Q+  ++VK G + ++FV   L++ Y   G + 
Sbjct: 168 GSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMD 227

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           D     DE+   +VV+W ++I    +    +EA  +F  M++ G+ P++ T    +  C 
Sbjct: 228 DAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCG 287

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            L++ + G +V + +   G K +  + NAL+DMY KC   ++  ++F E  +RN V  N+
Sbjct: 288 ALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNS 347

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           I+S   + G   +AL +   M   G + +R  + S + ASA L D+  GR  HG+++RN 
Sbjct: 348 IISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL 407

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           L     + + ++DMY KCG  E A ++F  +  +  VS+N+L+AG ++ G  E A E++ 
Sbjct: 408 LNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYH 467

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
           +M   D                               I+ D+ T   + + C      + 
Sbjct: 468 DMQSEDG------------------------------IQPDQFTFTTLLTLCANQRNDNQ 497

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            + I+A++ +  I  ++ + T LV M++ CG    A ++F RM +R+  +W + I     
Sbjct: 498 GRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQ 557

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
            G  ++A+ LF +M   GIKPD      +L++C
Sbjct: 558 NGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 289/824 (35%), Positives = 469/824 (56%), Gaps = 41/824 (4%)

Query: 21  TNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           +N    +      PS+  L+NC +  EL Q    I+K G  ++  + +KV+    + G  
Sbjct: 36  SNSIPTRVYSHRHPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFG-- 93

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
            S + A + F++     +      +Y+ +++GY+      +A+  ++ +    +      
Sbjct: 94  -SNSEAARVFEHVELKLDV-----LYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGD 147

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L  C ++    +G ++HG I+  GF+ ++FV   +++ Y +C  I +  ++F+ M 
Sbjct: 148 YACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQ 207

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            +++VSWT+L+   A+    K A+ L  +M E G KP+SVT+V ++ A A ++ L +G  
Sbjct: 208 HKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRS 267

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           +  Y    G ++   + NAL+DMY KCG+   A+ +F   + + +V  NT++    + G 
Sbjct: 268 IHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGE 327

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           + EA A   +ML  G  P RVTM+  + A A LGDL  G   H  + +  L+   S+ N+
Sbjct: 328 SEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNS 387

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +I MY KC + ++A  IF+++  KT V+WN++I G  +NG V                  
Sbjct: 388 LISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCV------------------ 428

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
                        +EA+ LF +M S+ IK+D  T+VGV +A         AKWI+    +
Sbjct: 429 -------------KEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVR 475

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
             +  ++ ++TALVDM+A+CG  + A ++F  M++R V  W A I      G G++ ++L
Sbjct: 476 ACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDL 535

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           FNEM +  +KP+ I F+ V++ACSH G V +G  LF+SM + + + P + HY  MVDLLG
Sbjct: 536 FNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLG 595

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAG L +A + I+ MP++P   + G++L AC+ H+NV++   AA+++ +LDP++ G HVL
Sbjct: 596 RAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVL 655

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           L+NIYAS   W  VA+VR  M+++G+ K PG S +E+  ++H F SG  +HPE   I + 
Sbjct: 656 LANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAF 715

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L  +   ++ AGYVPD  + + DV+E  KK LLS HSE+LA+AFGL++TS    + + KN
Sbjct: 716 LETLGDEIKAAGYVPD-PDSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKN 774

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH   K +S V  REIIVRD  RFH F+ GSCSC D+W
Sbjct: 775 LRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 301/813 (37%), Positives = 454/813 (55%), Gaps = 56/813 (6%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           SLK+ K ++   + +  ++   LG K   +S +   C        L  A + FD    + 
Sbjct: 109 SLKDGKEVDNFIRGNGFVIDSNLGSK---LSLMYTNCGD------LKEASRVFD----EV 155

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
           +    LF +N L+   +  G    +I L+ ++   G+  D +TF  V  + +   +   G
Sbjct: 156 KIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
            Q+HG I+K GF     V N L+ FY +   +   R+VFDEM+ER+V+SW S+I      
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA----N 273
            L ++ + +F +M+  GI+ +  T+V V + CA  + + LG  V      +G+KA     
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV----HSIGVKACFSRE 330

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
               N L+DMY KCG +D+AK +F E  DR++V   ++++ Y R GLA EA+ + +EM  
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQE 392
            G  PD  T+ + ++  A+   L  G+  H ++  N L G+D  + N ++DMY KCG   
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL-GFDIFVSNALMDMYAKCGS-- 447

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
                                        ++ A  VFSEM  +D ISWNT++GG ++   
Sbjct: 448 -----------------------------MQEAELVFSEMRVKDIISWNTIIGGYSKNCY 478

Query: 453 FEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
             EA+ LF ++L E R   D  T+  V  AC  L A D  + I+ YI +NG   D  +A 
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 538

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           +LVDM+A+CG    A  +F  +  +D+ +WT  I    M G G++A+ LFN+M + GI+ 
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 598

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I FV +L ACSH GLV++GW  F  M     + P + HY C+VD+L R G L +A   
Sbjct: 599 DEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRF 658

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I++MP+ P+  IWG+LL  C+ H +V +A   AE++ EL+PE +G +VL++NIYA A KW
Sbjct: 659 IENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKW 718

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             V R+R ++ ++G+RK PG S IE+ G+V+ F +GD S+PE  NI + LR++  R+ + 
Sbjct: 719 EQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEE 778

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           GY P     L+D +E EK+  L  HSEKLAMA G+IS+     IRV KNLR+C DCH  A
Sbjct: 779 GYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMA 838

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K +SK+  REI++RD+NRFH F+ G CSC  FW
Sbjct: 839 KFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 261/556 (46%), Gaps = 65/556 (11%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D  T   VL  C  S +  +G +V   I   GF  D  + + L   Y  CGD+ +  RVF
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           DE+     + W  L+   A+      ++ LF +M+  G++ +S T  CV  + + L+++ 
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
            G+++  +I + G      + N+LV  Y+K   VD+A+++F E  +R+++  N+I++ YV
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
             GLA + L++  +ML+ G   D  T++S  +  A    +  GR  H   ++      D 
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
            CNT++DMY KCG  + A  +F  MS+++VVS+ S+IAG  + G                
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG---------------- 376

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                  L G        EA++LF  M  E I  D  T+  V + C     LD  K ++ 
Sbjct: 377 -------LAG--------EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           +I++N +  D+ ++ AL+DM+A+CG  Q A  VF  M  +D+ +W   IG  +      +
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481

Query: 557 AVELFNEMLRQG-IKPDSIVFVGVLTACS-----------HGGLVNQGW----HLFRSMT 600
           A+ LFN +L +    PD      VL AC+           HG ++  G+    H+  S+ 
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 601 DIHG---------------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDV 642
           D++                 S  +V +  M+   G  G   EA+ L   M    +E +++
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601

Query: 643 IWGSLLAACQKHQNVD 658
            + SLL AC     VD
Sbjct: 602 SFVSLLYACSHSGLVD 617



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 94/233 (40%), Gaps = 39/233 (16%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           NT L    +    E A++L  V  S +  +D  T+  V   C    +L   K +  +I  
Sbjct: 65  NTQLRRFCESGNLENAVKLLCV--SGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           NG   D  L + L  M+  CGD + A +VF  ++      W   +  +A  G+   ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F +M+  G++ DS  F  V  +             F S+  +HG                
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKS-------------FSSLRSVHG---------------- 213

Query: 621 RAGLLGEALD--LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
                GE L   ++KS   E N V   SL+A   K+Q VD A    + +TE D
Sbjct: 214 -----GEQLHGFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERD 260


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 276/769 (35%), Positives = 452/769 (58%), Gaps = 10/769 (1%)

Query: 80   FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
            +  + +A+  FD     NE S     +++++ GY  +GL  EA+ L+ ++ G G+ P+ F
Sbjct: 321  YGHMAHARYVFDEMRHRNEAS-----WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGF 375

Query: 140  TFPFVLNACTKSSAFG-EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
                ++ AC++S     EG QVHG +VK G   DV+V   L++FYG  G + + +++F+E
Sbjct: 376  MVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEE 435

Query: 199  MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
            M + NVVSWTSL+   +    P E + ++  M +EG+  N  T   V S+C  L++  LG
Sbjct: 436  MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 495

Query: 259  DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             +V  +I + G + +  + N+L+ M+    +V+ A  +F    + +++  N ++S Y   
Sbjct: 496  YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 555

Query: 319  GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
            GL RE+L     M       +  T+ S +S  + + +L  GR  HG V++ GL+    IC
Sbjct: 556  GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 615

Query: 379  NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE---MPGR 435
            NT++ +Y + G+ E A  +F  M+ + ++SWNS++A  +++G      ++ +E   M   
Sbjct: 616  NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKP 675

Query: 436  DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
            D ++WN ++GG  +     EA++ ++++  + I  + +TMV +A A   L  L+  + ++
Sbjct: 676  DRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLA-ATANLAVLEEGQQLH 734

Query: 496  AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
              + K G   D+ +  A +DM+ +CG+    +++  +   R   +W   I A A  G  +
Sbjct: 735  GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQ 794

Query: 556  QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
            +A E F+EML+ G KPD + FV +L+AC+HGGLV++G   + SMT   GV P I H  C+
Sbjct: 795  KARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCI 854

Query: 616  VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
            +DLLGR+G L  A   IK MPV PND+ W SLLAAC+ H N+++A   AE + ELDP   
Sbjct: 855  IDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDD 914

Query: 676  GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
              +VL SN+ A++GKW +V  +R +M    I+K P  S +++  KVH F  G++ HP+ +
Sbjct: 915  SAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQAS 974

Query: 736  NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
             IS+ L E+    ++AGYVPD +  L D+DE++K+Y L +HSE+LA+AFGLI+T ++  +
Sbjct: 975  RISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTL 1034

Query: 796  RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            R+ KNLR+C DCHS  K VS +  R+I++RD  RFH F  G CSC D+W
Sbjct: 1035 RIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 220/490 (44%), Gaps = 89/490 (18%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C    A  +G  +H  ++  GF  D+ +   LI FY + GD++  R VFD M ER+
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSWT+++   ++    ++A  LF +M   G+K N                         
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN------------------------- 130

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
                         +ALVD + KCG ++ A  LFG   +R++V  N ++  Y   G A +
Sbjct: 131 --------------HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 176

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV----------------- 366
           +  +   ML  G  PD  T+ S + ASA+ G L+     HG +                 
Sbjct: 177 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 236

Query: 367 -------------LRNGL-----------------EGWDSICNTMIDMYMKCGKQEMACR 396
                        LR G+                 EG  ++ N +IDMY K G+ E A R
Sbjct: 237 AYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKR 296

Query: 397 IFDHMSNKTVVSWNSLIAGLIKN--GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            FD M  K V+SW SLI+G  K+  G +  AR VF EM  R+  SW+TML G  +  ++E
Sbjct: 297 AFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYE 356

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATAL 513
           EA+ LF  M    ++ +   +  + +AC   G + D    ++ ++ K GI  D+ + TAL
Sbjct: 357 EAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTAL 416

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           V  +   G    A ++F  M   +V +WT+ +   +  GN  + + ++  M ++G+  + 
Sbjct: 417 VHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQ 476

Query: 574 IVFVGVLTAC 583
             F  V ++C
Sbjct: 477 NTFATVTSSC 486



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 152/658 (23%), Positives = 279/658 (42%), Gaps = 91/658 (13%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I GY+  G   ++  ++  +   G++PD +T   VL A  +        Q+HG I 
Sbjct: 161 WNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIIT 220

Query: 166 KMGF-------------------------------DRDVF----------------VENC 178
           ++G+                                +D+F                + N 
Sbjct: 221 QLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNA 280

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA----------------------- 215
           LI+ Y + G+I D +R FDEM E+NV+SWTSLI   A                       
Sbjct: 281 LIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEA 340

Query: 216 ----------RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL-ELGDRVCAY 264
                     R  L +EAV LF +M   G++PN   +  +I+AC++   + + G +V  +
Sbjct: 341 SWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGF 400

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           + + G+  +  +  ALV  Y   G V  A++LF E  D N+V   ++M  Y   G   E 
Sbjct: 401 VVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEV 460

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +   M   G   ++ T  +  S+   L D + G    G++++ G E   S+ N++I M
Sbjct: 461 LNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM 520

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           +      E AC +FDHM+   ++SWN++I+    +G    +   F  M    + + +T L
Sbjct: 521 FSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTL 580

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL----GALDLAKWIY-AYIE 499
             L       + ++  R +    +K+   + V + +    L    G  + A+ ++ A  E
Sbjct: 581 SSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE 640

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           ++ I  +  +A  + D   +C D  + +    +M K D   W A IG  A      +AV+
Sbjct: 641 RDLISWNSMMACYVQD--GKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVK 698

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            +  +  +GI  + I  V  L A ++  ++ +G  L   +  + G    +      +D+ 
Sbjct: 699 AYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVIKL-GFESDLHVTNAAMDMY 756

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           G+ G + + L ++   P+  + + W  L++A  +H     A      + +L P+   V
Sbjct: 757 GKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHV 813



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 19/277 (6%)

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           E  +++ S   ++D    + +   C    A      I+ ++  NG   D+ L T L+  +
Sbjct: 16  EALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFY 75

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            + GD   A  VF  M +R V +WTA +   +  G  E+A  LF++M   G+K +    V
Sbjct: 76  VKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH-ALV 134

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM-- 635
              + C   G +    +LF +M +       +V +  M+      G   ++  + +SM  
Sbjct: 135 DFHSKC---GKMEDASYLFGTMME-----RDVVSWNAMIGGYAVQGFADDSFCMFRSMLR 186

Query: 636 -PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV-LLSNIYASAGKWTN 693
             + P+    GS+L A  +   + IA      IT+L      +   LL N YA  G   +
Sbjct: 187 GGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRS 246

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHE--FTSGD 728
              +R  M    ++K   SS+  + G  HE  +T G+
Sbjct: 247 AKDLRKGM----LKKDLFSSTALITGYAHEGIYTMGN 279


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 279/771 (36%), Positives = 440/771 (57%), Gaps = 68/771 (8%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  +L    +      G  VH  I+K G    V++ N L+ FY + G +     VFDEM 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 201 ERNVVSWTSLICACARR-----------DLPK--------------------EAVYLFFE 229
            ++  SW +LI   A++           ++P                      A+++F +
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA----------------- 272
           M+ E + P+  T+  V+S+CA  Q L++G ++ +++ +LG+ +                 
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192

Query: 273 --------------NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
                         N    NAL+ +YM+ G  + A   F +  DR++V  N+++S Y + 
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252

Query: 319 GLAREALAILDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           G   EAL I  +ML + P  +PD  T+ S +SA A L  L  G+  H Y+LR   E   +
Sbjct: 253 GYNLEALVIFSKML-NEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 377 ICNTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
           + N +I MY K G  E+A  I +H   SN  ++++ SL+ G  K G+V+ ARE+F+++  
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           RD ++W  M+ G  Q  ++ +A+ELFR+M++E  + +  T+  + S    L  L+  K I
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
           +A   K G      +  AL+ M+A+ G+   A +VF     K+++ +WT+ I A+A  G 
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G++A+ LF  ML  G+KPD I +VGVL+AC+H GLV QG   +  MT++H + P + HY 
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYA 551

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CM+DL GRAGLL EA   I+SMP+EP+++ WGSLLA+C+ H+N D+A  AAER+  +DP 
Sbjct: 552 CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPG 611

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
            SG ++ L+N+Y++ GKW N A+ R  MK++G+RK  G S I +  +VH F   D  HP+
Sbjct: 612 NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQ 671

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
            + I  ++ E+   ++  G++PD  +VL D++E+ K+ +L +HSEKLA+AFGL++T +  
Sbjct: 672 KDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENT 731

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +R++KNLR+C DCHS  K +SK+  REIIVRD  RFH F+ GSCSC D+W
Sbjct: 732 ALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 263/600 (43%), Gaps = 128/600 (21%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD----------------YYIK 95
           HC I+K+GL      ++ ++   A+ G   SL +A   FD                Y  +
Sbjct: 33  HCQIIKKGLHLGVYLMNNLMTFYAKTG---SLRFAHHVFDEMPLKSTFSWNTLISGYAKQ 89

Query: 96  DN-ETSATLFM---------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
            N E S  L           + ++I GY+  GL   AI ++ ++    + P +FT   VL
Sbjct: 90  GNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVL 149

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS----- 200
           ++C  +     G ++H  +VK+G    V V   L+N Y +CGD V  + VFD M+     
Sbjct: 150 SSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNIS 209

Query: 201 --------------------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEE- 233
                                     +R++VSW S+I   +++    EA+ +F +M+ E 
Sbjct: 210 TWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEP 269

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT- 292
            +KP++ T+  ++SACA L+ L +G ++ AYI     + +  + NAL+ MY K G V+  
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329

Query: 293 --------------------------------AKQLFGECKDRNLVLCNTIMSNYVRLGL 320
                                           A+++F + +DR++V    ++  YV+ GL
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             +AL +   M+  GP P+  T+ + +S S+ L  L  G+  H   ++ G     S+ N 
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449

Query: 381 MIDMYMKCGKQEMACRIFD-HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +I MY K G   +A R+FD     K +VSW S+I  L ++G                   
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG------------------- 490

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI- 498
               LG        +EA+ LF  MLS  +K D +T VGV SAC ++G ++  +  Y  + 
Sbjct: 491 ----LG--------KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMT 538

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           E + I   +     ++D++ R G  Q A      M  + D  AW + + +  +  N + A
Sbjct: 539 EVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLA 598


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 302/881 (34%), Positives = 467/881 (53%), Gaps = 88/881 (9%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
            + C T   L Q H H+   GL   P   +K++ + AQ+G FES   +++ FD + K + 
Sbjct: 8   FRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFES---SKRVFDTFPKPDS 64

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK-----FTFPFVLNACTKSSA 153
                FM+  LI+ Y   G   EA+SLY E+    +  D+     F FP VL AC+    
Sbjct: 65  -----FMWGVLIKCYVWGGFFEEAVSLYHEM----VYQDQTQISNFVFPSVLKACSGFGD 115

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G +VHG ++K GF+ D  VE  L+  YGE   + D  + FD M  R+VV+W+S++  
Sbjct: 116 LSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLN 175

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             +     E + +F +M+ E ++P+SVTM+ V  AC++L +L LG  V  Y+    +++N
Sbjct: 176 FVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESN 235

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
           A + N+L+ MY K G + +A++LF     R       ++S Y + G  +EAL +  +M  
Sbjct: 236 ASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQE 295

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG-------------------- 373
               P++VTM+  + A A+LG +  GR  HG+V+R  ++                     
Sbjct: 296 FKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLR 355

Query: 374 -----WDSI-------CNTMIDMYMKCGKQEMACRIFDHMSNKTVVS------------- 408
                +++I        NT+I ++ + G+ E A  +F  M  + ++              
Sbjct: 356 DCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACG 415

Query: 409 -------------------------WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
                                     N+LI    K G V SA ++F ++  +  ++WN+M
Sbjct: 416 TISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSM 475

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G +Q     EA+ LF  M    +K+D++T + V  AC +LG L+  KW++  +   G+
Sbjct: 476 ICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGL 535

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D  L TAL DM+++CG+ Q A  VF RM +R + +W+  I    M G     + LFN+
Sbjct: 536 RKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQ 595

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           ML  GIKP+ I F+ +L+ACSH G V +G   F SM++  GV P+  H+ CMVDLL RAG
Sbjct: 596 MLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEF-GVEPKHDHFACMVDLLSRAG 654

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L  A  +I S+P   N  IWG+LL  C+ H+ +DI     + + ++D   +G + LLSN
Sbjct: 655 DLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSN 714

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           IYA  G W    +VR  MK +G+RK+PG S+IE++ K++ F  GD SH +  +I   L  
Sbjct: 715 IYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLEN 774

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
               +    Y  +  N ++   +  K+  +  HSEKLA+AFG+I+T     +R+ KNLR+
Sbjct: 775 FRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRV 834

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCHSFAK+ SK+  REII+RD NRFH FR GSCSC+D+W
Sbjct: 835 CRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 297/803 (36%), Positives = 442/803 (55%), Gaps = 42/803 (5%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
            L  +K+ H H +  GL       + +V   A+ G+ +    A+  FD  ++ +     +
Sbjct: 146 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDD---ARVVFDGMVERD-----I 197

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC--TKSSAFGEGVQVH 161
           F +  +I G +  G G EA SL++++   G LP+  T+  +LNA   T + A     +VH
Sbjct: 198 FSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVH 257

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
               K GF  D+ V N LI+ Y +CG I D R VFD M +R+V+SW ++I   A+     
Sbjct: 258 KHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGH 317

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA  +F +M +EG  P+S T + +++        E    V  +  E+G+ ++  + +A V
Sbjct: 318 EAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFV 377

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            MY++CG++D A+ +F +   RN+   N ++    +    REAL++  +M   G  PD  
Sbjct: 378 HMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDAT 437

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T ++ +SA+     L   +  H Y +  GL     + N ++ MY KCG            
Sbjct: 438 TFVNILSANVGEEALEWVKEVHSYAIDAGLVDL-RVGNALVHMYAKCG------------ 484

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                   N++ A           ++VF +M  R+  +W  M+ GL Q     EA  LF 
Sbjct: 485 --------NTMYA-----------KQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFL 525

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            ML E I  D  T V + SAC   GAL+  K ++++    G+  D+++  ALV M+A+CG
Sbjct: 526 QMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCG 585

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
               A +VF  M +RDV +WT  IG +A  G G  A++LF +M  +G KP+   FV VL+
Sbjct: 586 SVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLS 645

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV++G   F S+T  +G+ P + HY CMVDLLGRAG L EA   I +MP+EP D
Sbjct: 646 ACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGD 705

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
             WG+LL AC  + N+++A +AA+   +L P+ +  +VLLSNIYA+ G W     VR  M
Sbjct: 706 APWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMM 765

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           + +GIRK PG S IEV+ ++H F  GD SHPE   I + L+++  RL+  GYVPD   VL
Sbjct: 766 QRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVL 825

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            + D++ K+  L  HSEKLA+ +GL+ T    PIRV KNLR+C DCH+  K +SKV  RE
Sbjct: 826 RNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGRE 885

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+ RD  RFH F+ G CSC D+W
Sbjct: 886 IVARDAKRFHHFKDGVCSCGDYW 908



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 238/476 (50%), Gaps = 33/476 (6%)

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +I GY+  G   +A+ +Y ++   G  P++ T+  +L AC    +   G ++H  I++ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           F  DV VE  L+N Y +CG I D + +FD+M ERNV+SWT +I   A     +EA + F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M  EG  PNS T V +++A A    LE    V ++    G+  +  + NALV MY K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           ++D A+ +F    +R++     ++    + G  +EA ++  +M   G  P+  T LS ++
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 349 ASA--QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           ASA    G L   +  H +  + G      + N +I MY KCG  + A  +FD M ++ V
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           +SWN++I GL +NG                                  EA  +F  M  E
Sbjct: 301 ISWNAMIGGLAQNG-------------------------------CGHEAFTIFLKMQQE 329

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
               D  T + + +     GA +  K ++ +  + G+  D+++ +A V M+ RCG    A
Sbjct: 330 GFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDA 389

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
             +F ++  R+V+ W A IG +A +  G +A+ LF +M R+G  PD+  FV +L+A
Sbjct: 390 QLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA 445


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 281/752 (37%), Positives = 438/752 (58%), Gaps = 38/752 (5%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAF 154
           D      ++ +NS+I  Y   G   EAI  + +L     I PD +TFP VL AC      
Sbjct: 175 DQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTL 231

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
            +G ++H    K+GF  +VFV   LI+ Y   G     R +FD+M  R++ SW ++I   
Sbjct: 232 VDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +     +A+ +  EM  EGIK N VT+V ++  C +L ++     +  Y+ + G++ + 
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + NAL++MY K G ++ A++ F +    ++V  N+I++ Y +      A     +M L+
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS-ICNTMIDMYMKCGKQEM 393
           G +PD +T++S  S  AQ  D    R  HG+++R G    D  I N ++DMY K G    
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGL--- 468

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                                       ++SA +VF  +P +D ISWNT++ G  Q  + 
Sbjct: 469 ----------------------------LDSAHKVFEIIPVKDVISWNTLITGYAQNGLA 500

Query: 454 EEAMELFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            EA+E++++M   + I  ++ T V +  A  ++GAL     I+  + K  +H D+ +AT 
Sbjct: 501 SEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATC 560

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+D++ +CG    AM +F ++ +     W A I    + G+ E+ ++LF EML +G+KPD
Sbjct: 561 LIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPD 620

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + FV +L+ACSH G V +G   FR M + +G+ P + HYGCMVDLLGRAG L  A D I
Sbjct: 621 HVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFI 679

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           K MP++P+  IWG+LL AC+ H N+++  +A++R+ E+D +  G +VLLSNIYA+ GKW 
Sbjct: 680 KDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWE 739

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            V +VR   +E+G++K PG S+IEVN KV  F +G++SHP+   I   LR +  +++  G
Sbjct: 740 GVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 799

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y+PD + VL DV+E EK+++L+ HSE+LA+AFG+IST    PIR+ KNLR+C DCH+  K
Sbjct: 800 YIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATK 859

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S++  REI+VRD+NRFH F+ G CSC D+W
Sbjct: 860 FISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 161/589 (27%), Positives = 282/589 (47%), Gaps = 59/589 (10%)

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G   ++  F F+ ++ TK+  F + +  H  +V  G  + +F+   L+N Y   GD+ 
Sbjct: 112 GLGNQNEEIDFNFLFDSSTKT-PFAKCL--HALLVVAGKVQSIFISTRLVNLYANLGDVS 168

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE--MVEEGIKPNSVTMVCVISA 248
             R  FD++ +++V +W S+I A        EA+  F++  +V E I+P+  T   V+ A
Sbjct: 169 LSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSE-IRPDFYTFPPVLKA 227

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C  L +   G ++  +  +LG + N  +  +L+ MY + G    A+ LF +   R++   
Sbjct: 228 CGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSW 284

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N ++S  ++ G A +AL +LDEM L G + + VT++S +    QLGD+    + H YV++
Sbjct: 285 NAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIK 344

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           +GLE    + N +I+MY K G  E A + F  M    VVSWNS+IA   +N D  +A   
Sbjct: 345 HGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGF 404

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           F +M                Q N F+                D +T+V +AS        
Sbjct: 405 FVKM----------------QLNGFQP---------------DLLTLVSLASIVAQSRDC 433

Query: 489 DLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
             ++ ++ +I + G +  D+ +  A+VDM+A+ G    A +VF  +  +DV +W   I  
Sbjct: 434 KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITG 493

Query: 548 MAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM--TDIHG 604
            A  G   +A+E++  M   + I P+   +V +L A +H G + QG  +   +  T++H 
Sbjct: 494 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLH- 552

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA--ACQKHQNVDIAAY 662
               +    C++D+ G+ G L +A+ L   +P E + V W ++++      H    +  +
Sbjct: 553 --LDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEKTLKLF 609

Query: 663 AAERITELDPEKSGVHVLLS----NIYASAGKWTNVARVRLQMKEQGIR 707
                  + P+      LLS    + +   GKW      RL M+E GI+
Sbjct: 610 GEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC----FRL-MQEYGIK 653



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 247/520 (47%), Gaps = 42/520 (8%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           LK C TL + ++ HC   K G        + ++   ++ G F  +  A+  F     D+ 
Sbjct: 225 LKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFG-FTGI--ARSLF-----DDM 276

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
               +  +N++I G    G   +A+ +  E+   GI  +  T   +L  C +       +
Sbjct: 277 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM 336

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +H  ++K G + D+FV N LIN Y + G++ D R+ F +M   +VVSW S+I A  + D
Sbjct: 337 LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQND 396

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMV 277
            P  A   F +M   G +P+ +T+V + S  A+ ++ +    V  +I   G +  + ++ 
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LLHGP 336
           NA+VDMY K G +D+A ++F     ++++  NT+++ Y + GLA EA+ +   M      
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEI 516

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            P++ T +S + A A +G L  G   HG V++  L     +   +ID+Y KCG+   A  
Sbjct: 517 IPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMS 576

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F  +  ++ V+WN++I+    +G  E   ++F EM                        
Sbjct: 577 LFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEM------------------------ 612

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
                  L E +K D VT V + SAC + G ++  KW +  +++ GI   ++    +VD+
Sbjct: 613 -------LDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDL 665

Query: 517 FARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
             R G  + A    + M  + D S W A +GA  + GN E
Sbjct: 666 LGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 705


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 301/901 (33%), Positives = 469/901 (52%), Gaps = 90/901 (9%)

Query: 14   TPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCT 73
            +P   T  N   A TTP              L+E K+ H   +++GL       + +V  
Sbjct: 226  SPDKVTYINLLDAFTTPS------------MLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273

Query: 74   CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
            C + G  +S   A++AF            + +YN+LI   +  G  VEA   Y  +   G
Sbjct: 274  CVRCGDVDS---AKQAFK-----GTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG 325

Query: 134  ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
            +  ++ T+  +LNAC+ S A   G  +H  I + G   DV + N LI+ Y  CGD+   R
Sbjct: 326  VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAR 385

Query: 194  RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
             +F  M +R+++SW ++I   ARR+   EA+ L+ +M  EG+KP  VT + ++SACA   
Sbjct: 386  ELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSS 445

Query: 254  NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
                G  +   I   G+K+N  + NAL++MY +CG++  A+ +F   + R+++  N++++
Sbjct: 446  AYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIA 505

Query: 314  NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA------------------------ 349
             + + G    A  +  EM      PD +T  S +S                         
Sbjct: 506  GHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQL 565

Query: 350  SAQLGDLL------CGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMS 402
               LG+ L      CG +     + + L+  D +  T MI      G+   A  +F  M 
Sbjct: 566  DVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQ 625

Query: 403  N--------------------------KTVVSW-------------NSLIAGLIKNGDVE 423
            N                          K V+++             N+LI+   K+G + 
Sbjct: 626  NEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMT 685

Query: 424  SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
             AREVF +MP RD +SWN ++ G  Q  + + A+E    M  + +  ++ + V + +AC 
Sbjct: 686  DAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACS 745

Query: 484  YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
               AL+  K ++A I K  +  D+++  AL+ M+A+CG    A +VF  + +++V  W A
Sbjct: 746  SFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNA 805

Query: 544  AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
             I A A  G   +A+  FN M ++GIKPD   F  +L+AC+H GLV +G+ +F SM   +
Sbjct: 806  MINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEY 865

Query: 604  GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
            GV P I HYGC+V LLGRA    EA  LI  MP  P+  +W +LL AC+ H N+ +A +A
Sbjct: 866  GVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHA 925

Query: 664  AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
            A    +L+     V++LLSN+YA+AG+W +VA++R  M+ +GIRK PG S IEV+  +HE
Sbjct: 926  ANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHE 985

Query: 724  FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
            F + D SHPE   I + L+ ++  + +AGY PD  +VL D+ +  ++  L  HSE+LA+A
Sbjct: 986  FIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIA 1045

Query: 784  FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
            +GLI T    PIR+ KNLR+C DCH+ +K +SK+  REII RD+NRFH F+ G CSC D+
Sbjct: 1046 YGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDY 1105

Query: 844  W 844
            W
Sbjct: 1106 W 1106



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 181/658 (27%), Positives = 315/658 (47%), Gaps = 46/658 (6%)

Query: 30  PKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P     I  L  C +  EL   K+ H  I+K G    P   + ++    + G    L  A
Sbjct: 126 PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG---DLPRA 182

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ F        +   +  YN+++  Y+      E + L+ +++  GI PDK T+  +L+
Sbjct: 183 RQVFA-----GISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLD 237

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           A T  S   EG ++H   V+ G + D+ V   L+     CGD+   ++ F   ++R+VV 
Sbjct: 238 AFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVV 297

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           + +LI A A+     EA   ++ M  +G+  N  T + +++AC+  + LE G  + ++I 
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           E G  ++  + NAL+ MY +CG +  A++LF     R+L+  N I++ Y R     EA+ 
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +  +M   G +P RVT L  +SA A       G+M H  +LR+G++    + N +++MY 
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           +CG    A  +F+    + V+SWNS+IAG  ++G  E+A ++F EM              
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQ------------- 524

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                             +E ++ D +T   V S C    AL+L K I+  I ++G+  D
Sbjct: 525 ------------------NEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + L  AL++M+ RCG  Q A  VF  ++ RDV +WTA IG  A +G   +A+ELF +M  
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           +G +P    F  +L  C+    +++G  +   + +  G          ++    ++G + 
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILN-SGYELDTGVGNALISAYSKSGSMT 685

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD--PEKSGVHVLLS 682
           +A ++   MP   + V W  ++A   ++     A   A ++ E D  P K     LL+
Sbjct: 686 DAREVFDKMPSR-DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLN 742



 Score =  276 bits (705), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 184/642 (28%), Positives = 316/642 (49%), Gaps = 47/642 (7%)

Query: 15  PTVTTLTNQHKAKTTPKDSPS-IGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKV 70
           P    ++N H+ + T  +  + +  L+NC   + L E K+ H  +++  +G    ++S +
Sbjct: 9   PDREDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVG-PDIFLSNL 67

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           +          S+  A + F    + +  S     +NSLI  Y+  G   +A  L+ E+ 
Sbjct: 68  LIN--MYVKCRSVLDAHQVFKEMPRRDVIS-----WNSLISCYAQQGFKKKAFQLFEEMQ 120

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
             G +P+K T+  +L AC   +    G ++H  I+K G+ RD  V+N L++ YG+CGD+ 
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
             R+VF  +S R+VVS+ +++   A++   KE + LF +M  EGI P+ VT + ++ A  
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
               L+ G R+     E G+ ++  +  ALV M ++CG VD+AKQ F    DR++V+ N 
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNA 300

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++   + G   EA      M   G   +R T LS ++A +    L  G++ H ++  +G
Sbjct: 301 LIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
                 I N +I MY +CG    A  +F  M  + ++SWN++IAG  +  D         
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDR-------- 412

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                                   EAM L++ M SE +K  RVT + + SAC    A   
Sbjct: 413 -----------------------GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            K I+  I ++GI  +  LA AL++M+ RCG    A  VF   + RDV +W + I   A 
Sbjct: 450 GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQ 509

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G+ E A +LF EM  + ++PD+I F  VL+ C +   +  G  +   +T+  G+   + 
Sbjct: 510 HGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE-SGLQLDVN 568

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAAC 651
               ++++  R G L +A ++  S+  +  DV+ W +++  C
Sbjct: 569 LGNALINMYIRCGSLQDARNVFHSL--QHRDVMSWTAMIGGC 608


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 294/802 (36%), Positives = 441/802 (54%), Gaps = 42/802 (5%)

Query: 45   LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
            L  +K+ H H +  GL       + +V   A+ G+ +    A+  FD       T   +F
Sbjct: 336  LEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDD---ARVVFD-----GMTERDIF 387

Query: 105  MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG-EGVQV-HG 162
             +  +I G +  G G EA SL++++   G LP+  T+  +LNA   +S    E V+V H 
Sbjct: 388  SWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHK 447

Query: 163  AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
               + GF  D+ + N LI+ Y +CG I D R VFD M +R+V+SW +++   A+     E
Sbjct: 448  HAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHE 507

Query: 223  AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            A  +F +M +EG+ P+S T + +++       LE  + V  +  E G+ ++  + +A + 
Sbjct: 508  AFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIH 567

Query: 283  MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            MY++CG++D A+ LF +   R++   N ++    +    REAL++  +M   G  PD  T
Sbjct: 568  MYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATT 627

Query: 343  MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
             ++ +SA+     L   +  H +    GL     + N ++  Y KCG             
Sbjct: 628  FINILSANVDEEALEWVKEVHSHATDAGLVDL-RVGNALVHTYSKCG------------- 673

Query: 403  NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                              +V+ A++VF +M  R+  +W  M+GGL Q     +A   F  
Sbjct: 674  ------------------NVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQ 715

Query: 463  MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
            ML E I  D  T V + SAC   GAL+  K ++ +    G+  D+++  ALV M+A+CG 
Sbjct: 716  MLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGS 775

Query: 523  PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
               A  VF  M +RDV +WT  IG +A  G G +A++ F +M  +G KP+   +V VLTA
Sbjct: 776  IDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTA 835

Query: 583  CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
            CSH GLV++G   F SMT  +G+ P + HY CMVDLLGRAGLL EA   I +MP+EP+D 
Sbjct: 836  CSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDA 895

Query: 643  IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
             WG+LL AC  + N+++A +AA+   +L P+ +  +VLLSNIYA+ GKW     VR  M+
Sbjct: 896  PWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQ 955

Query: 703  EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
             +GIRK PG S IEV+ ++H F  GD SHPE   I + L ++  RL+  GYVPD   VL 
Sbjct: 956  RKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLR 1015

Query: 763  DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
            + D++ K+  L  HSEKLA+ +GL+ T    PIRV KNLR+C DCH+  K +SK+  REI
Sbjct: 1016 NTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREI 1075

Query: 823  IVRDNNRFHFFRQGSCSCSDFW 844
            + RD  RFH F+ G CSC D+W
Sbjct: 1076 VARDAKRFHHFKDGVCSCGDYW 1097



 Score =  249 bits (635), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 165/590 (27%), Positives = 282/590 (47%), Gaps = 45/590 (7%)

Query: 7   PSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSY 66
           PS LV A  +V     Q     T KD+ ++  ++  + +      + +IL++ L  +   
Sbjct: 76  PSVLVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDIL 135

Query: 67  ISKVVCTCA-QMGTFESLTYAQKAFDYYIK-----------DNETSATLFMYNSLIRGYS 114
           ++K V  C  + G  ++L  A K    YI+           D      ++++ ++I GY+
Sbjct: 136 LAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYA 195

Query: 115 CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF 174
             G   +A+ +Y ++      P++ T+  +L AC        G ++H  I++ GF  DV 
Sbjct: 196 EYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVR 255

Query: 175 VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           VE  L+N Y +CG I D + +FD+M ERNV+SWT +I   A     +EA +LF +M  EG
Sbjct: 256 VETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREG 315

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
             PNS T V +++A A    LE    V ++    G+  +  + NALV MY K G++D A+
Sbjct: 316 FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDAR 375

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS--AQ 352
            +F    +R++     ++    + G  +EA ++  +M  +G  P+  T LS ++AS  A 
Sbjct: 376 VVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAS 435

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
              L   ++ H +    G      I N +I MY KCG  + A  +FD M ++ V+SWN++
Sbjct: 436 TSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAM 495

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           + GL +NG                                  EA  +F  M  E +  D 
Sbjct: 496 MGGLAQNG-------------------------------CGHEAFTVFLQMQQEGLVPDS 524

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            T + + +  G   AL+    ++ +  + G+  D ++ +A + M+ RCG    A  +F +
Sbjct: 525 TTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDK 584

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
           +  R V+ W A IG  A +  G +A+ LF +M R+G  PD+  F+ +L+A
Sbjct: 585 LSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA 634



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 234/454 (51%), Gaps = 31/454 (6%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI  D F++  +L  C K        QVH  I+K G +++++V N L+  Y  CG +   
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCA 172

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R+VFD++ ++N+  WT++I   A     ++A+ ++ +M +E  +PN +T + ++ AC   
Sbjct: 173 RQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCP 232

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            NL+ G ++ A+I + G +++  +  ALV+MY+KCG+++ A+ +F +  +RN++    ++
Sbjct: 233 VNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMI 292

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
                 G  +EA  +  +M   G  P+  T +S ++A+A  G L   +  H + +  GL 
Sbjct: 293 GGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA 352

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + N ++ MY K G  + A  +FD M+ + + SW  +I GL ++G  + A  +F +M
Sbjct: 353 LDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQM 412

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                           Q N     +  +  +L+             ASA     AL+  K
Sbjct: 413 ----------------QRNGCLPNLTTYLSILN-------------ASAIASTSALEWVK 443

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++ + E+ G   D+++  AL+ M+A+CG    A  VF  M  RDV +W A +G +A  G
Sbjct: 444 VVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNG 503

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            G +A  +F +M ++G+ PDS  ++ +L   +HG
Sbjct: 504 CGHEAFTVFLQMQQEGLVPDSTTYLSLLN--THG 535



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 10/253 (3%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           + L  +K+ H H    GL       + +V T ++ G   ++ YA++ FD  ++ N T+ T
Sbjct: 639 EALEWVKEVHSHATDAGLV-DLRVGNALVHTYSKCG---NVKYAKQVFDDMVERNVTTWT 694

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +     +I G +  G G +A S ++++   GI+PD  T+  +L+AC  + A     +VH 
Sbjct: 695 M-----MIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHN 749

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             V  G   D+ V N L++ Y +CG I D R VFD+M ER+V SWT +I   A+     E
Sbjct: 750 HAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLE 809

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR-VCAYIDELGMKANALMVNALV 281
           A+  F +M  EG KPN  + V V++AC+    ++ G R   +   + G++        +V
Sbjct: 810 ALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMV 869

Query: 282 DMYMKCGAVDTAK 294
           D+  + G ++ A+
Sbjct: 870 DLLGRAGLLEEAE 882


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 277/707 (39%), Positives = 411/707 (58%), Gaps = 36/707 (5%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  +L  C +  +  +G +VH AI+K G   + ++EN L++ Y +CG + D RRVFD + 
Sbjct: 50  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +RN+VSWT++I A    +   EA   +  M   G KP+ VT V +++A    + L+LG +
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V   I E G++    +  +LV MY KCG +  A+ +F    ++N+V    +++ Y + G 
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL--EGWDSIC 378
              AL +L+ M      P+++T  S +        L  G+  H Y++++G   E W  + 
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELW--VV 287

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N++I MY KCG                                +E AR++FS++P RD +
Sbjct: 288 NSLITMYCKCG-------------------------------GLEEARKLFSDLPHRDVV 316

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +W  M+ G  Q    +EA+ LFR M  + IK D++T   V ++C     L   K I+  +
Sbjct: 317 TWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL 376

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI-GAMAMEGNGEQA 557
              G + D+ L +ALV M+A+CG    A  VF +M +R+V AWTA I G  A  G   +A
Sbjct: 377 VHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREA 436

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +E F++M +QGIKPD + F  VL+AC+H GLV +G   FRSM   +G+ P + HY C VD
Sbjct: 437 LEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVD 496

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGRAG L EA ++I SMP  P   +WG+LL+AC+ H +V+    AAE + +LDP+  G 
Sbjct: 497 LLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGA 556

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +V LS+IYA+AG++ +  +VR  M+++ + K PG S IEV+GKVH F   D+SHPE   I
Sbjct: 557 YVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQI 616

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
              L ++  ++++ GYVPD   VL DVDE++K+ +L  HSE+LA+ +GL+ T   MPIR+
Sbjct: 617 YVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRI 676

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VKNLR+C DCH+  K +SKV  REII RD  RFH F  G CSC DFW
Sbjct: 677 VKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 244/531 (45%), Gaps = 46/531 (8%)

Query: 37  GSLKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           G L+ C  L  L+Q    H  ILK G+       + ++   A+ G   SLT A++ FD  
Sbjct: 52  GLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCG---SLTDARRVFDS- 107

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I+D      +  + ++I  +      +EA   Y  +   G  PDK TF  +LNA T    
Sbjct: 108 IRDR----NIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPEL 163

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G +VH  IV+ G + +  V   L+  Y +CGDI   R +FD + E+NVV+WT LI  
Sbjct: 164 LQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAG 223

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A++     A+ L   M +  + PN +T   ++  C     LE G +V  YI + G    
Sbjct: 224 YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE 283

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +VN+L+ MY KCG ++ A++LF +   R++V    +++ Y +LG   EA+ +   M  
Sbjct: 284 LWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G +PD++T  S +++ +    L  G+  H  ++  G      + + ++ MY KCG  + 
Sbjct: 344 QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDD 403

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A  +F+ MS + VV+W ++I G                                 Q    
Sbjct: 404 ASLVFNQMSERNVVAWTAIITGCC------------------------------AQHGRC 433

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATA 512
            EA+E F  M  + IK D+VT   V SAC ++G ++  +  +  +  + GI   ++  + 
Sbjct: 434 REALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSC 493

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
            VD+  R G  + A  V   M      S W A + A  +  +   GE+A E
Sbjct: 494 FVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAE 544



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 4/230 (1%)

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
           L +    +EA+ +   M+ +  +V      G+   C  L +L+  + ++A I K+GI  +
Sbjct: 22  LCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 81

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             L   L+ M+A+CG    A +VF  +  R++ +WTA I A        +A + +  M  
Sbjct: 82  RYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
            G KPD + FV +L A ++  L+  G  +   + +  G+  +      +V +  + G + 
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEA-GLELEPRVGTSLVGMYAKCGDIS 200

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI--TELDPEK 674
           +A  +   +P E N V W  L+A   +   VD+A    E +   E+ P K
Sbjct: 201 KARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNK 249


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 275/808 (34%), Positives = 455/808 (56%), Gaps = 42/808 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L N  TL++L Q    ++  G+ +  S I+K+      +G   ++ + ++ F+   K + 
Sbjct: 21  LNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLG---AVAHVRQLFNKVSKPD- 76

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGEG 157
               LF++N LIRG+S  GL   +I LY  L     + PD FT+ F ++A ++      G
Sbjct: 77  ----LFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVG 132

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           V +H   +  G   ++FV + +++ Y +       R+VFD M ER+ V W ++I   +R 
Sbjct: 133 VLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRN 192

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
              ++++ +F +M++ G+  +S T+  V++A A+LQ   LG  +     + G+ ++  ++
Sbjct: 193 SYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL 252

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
             L+ +Y KCG     + LF +    +L+  N ++S Y        A+ +  E+L  G R
Sbjct: 253 TGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQR 312

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            +  T++  +        L   R+     L+ G+    S+   +  +Y         CR+
Sbjct: 313 VNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVY---------CRL 363

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                  +V+ AR++F E P +   SWN M+ G TQ  + + A+
Sbjct: 364 ----------------------NEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAI 401

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF+ M+ + +  + VT+  + SAC  LGAL + KW++  I+   +  ++ ++TALVDM+
Sbjct: 402 SLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMY 460

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG    A Q+F  M  ++V  W A I    + G+G++A++LF EML+ GI P  + F+
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFL 520

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            +L ACSH GLV++G  +F SM + +G  P   HY CMVD+LGRAG L  AL+ I+ MP+
Sbjct: 521 SILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPL 580

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           EP   +WG+LL AC  H+N ++A  A++R+ +LDPE  G +VLLSNIY++   +   A V
Sbjct: 581 EPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASV 640

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD- 756
           R  +K++ + K PG + IE++ + + FTSGD SHP+   I  ML ++  ++R+AGY  + 
Sbjct: 641 RQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAET 700

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           +T  L DV+++EK+ +++ HSEKLA+AFGLIST     IR++KNLR+C DCH+  K +SK
Sbjct: 701 VTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISK 760

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + +R I+VRD NRFH F+ G CSC D+W
Sbjct: 761 ITERVIVVRDANRFHHFKNGICSCGDYW 788


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 271/679 (39%), Positives = 403/679 (59%), Gaps = 31/679 (4%)

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + G   D ++ N ++    +  D    R +F ++ + N+  W ++I      D   +A+ 
Sbjct: 39  RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            +  M  EG  PN+ T   V+ ACA+L +L+LG ++   + + G   +  +  +LV +Y 
Sbjct: 99  FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYA 158

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG ++ A ++F +  D+N+V    I+S Y+ +G  REA+ +   +L     PD  T++ 
Sbjct: 159 KCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVR 218

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +SA  QLGDL  G   H  ++  G+     +  +++DMY KCG                
Sbjct: 219 VLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCG---------------- 262

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                          ++E AR VF  MP +D +SW  M+ G     + +EA++LF  M  
Sbjct: 263 ---------------NMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E +K D  T+VGV SAC  LGAL+L +W+   +++N    +  L TAL+D++A+CG   R
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSR 367

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A +VF+ M+++D   W A I  +AM G  + +  LF ++ + GIKPD   F+G+L  C+H
Sbjct: 368 AWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTH 427

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV++G   F SM     ++P I HYGCMVDLLGRAGLL EA  LI++MP+E N ++WG
Sbjct: 428 AGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWG 487

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC+ H++  +A  A +++ EL+P  SG +VLLSNIY++  KW   A+VRL M E+ 
Sbjct: 488 ALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKR 547

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           I+K PG S IEV+G VHEF  GD+ HP    I + L E+  +++ AGYVP    VL D++
Sbjct: 548 IQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIE 607

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+EK++ L  HSEKLA+AFGLIS + T  IRVVKNLR+C DCH   KL+S +  REI VR
Sbjct: 608 EEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVR 667

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           DNNRFH FR+GSCSC+D+W
Sbjct: 668 DNNRFHCFREGSCSCNDYW 686



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 242/491 (49%), Gaps = 41/491 (8%)

Query: 59  GLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGL 118
           GL H  +Y+  ++  C       S  ++   +  ++        +F++N++IRG      
Sbjct: 41  GLCHD-NYLLNMILRC-------SFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDC 92

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
             +AI  Y  +   G LP+ FTFPFVL AC +      GV++H  +VK GFD DVFV+  
Sbjct: 93  FDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTS 152

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           L+  Y +CG + D  +VFD++ ++NVVSWT++I         +EA+ +F  ++E  + P+
Sbjct: 153 LVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPD 212

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           S T+V V+SAC +L +L  G+ +   I E+GM  N  +  +LVDMY KCG ++ A+ +F 
Sbjct: 213 SFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFD 272

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
              ++++V    ++  Y   GL +EA+ +  +M     +PD  T++  +SA A+LG L  
Sbjct: 273 GMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALEL 332

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G    G V RN       +   +ID+Y KCG    A  +F  M  K  V WN++I+GL  
Sbjct: 333 GEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAM 392

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           NG V+ +  +F ++           LG                      IK D  T +G+
Sbjct: 393 NGYVKISFGLFGQV---------EKLG----------------------IKPDGNTFIGL 421

Query: 479 ASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KR 536
              C + G +D  +  +  + +   +   ++    +VD+  R G    A Q+ R M  + 
Sbjct: 422 LCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEA 481

Query: 537 DVSAWTAAIGA 547
           +   W A +GA
Sbjct: 482 NAIVWGALLGA 492



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 219/445 (49%), Gaps = 28/445 (6%)

Query: 39  LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  L +L+   + H  ++K G        + +VC  A+ G  E    A K FD    
Sbjct: 119 LKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED---AHKVFDDIPD 175

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            N  S T     ++I GY  +G   EAI ++  L    + PD FT   VL+ACT+     
Sbjct: 176 KNVVSWT-----AIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLN 230

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G  +H  I++MG  R+VFV   L++ Y +CG++   R VFD M E+++VSW ++I   A
Sbjct: 231 SGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYA 290

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              LPKEA+ LF +M  E +KP+  T+V V+SACA+L  LELG+ V   +D      N +
Sbjct: 291 LNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPV 350

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  AL+D+Y KCG++  A ++F   K+++ V+ N I+S     G  + +  +  ++   G
Sbjct: 351 LGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLG 410

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
            +PD  T +  +      G +  GR     M   + L   +E +      M+D+  + G 
Sbjct: 411 IKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHY----GCMVDLLGRAGL 466

Query: 391 QEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT----MLG 445
            + A ++  +M      + W +L+     + D + A     ++   +   WN+    +L 
Sbjct: 467 LDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELE--PWNSGNYVLLS 524

Query: 446 GLTQENM-FEEAMELFRVMLSERIK 469
            +   N+ ++EA ++   M  +RI+
Sbjct: 525 NIYSANLKWDEAAKVRLSMNEKRIQ 549


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 283/729 (38%), Positives = 421/729 (57%), Gaps = 42/729 (5%)

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           +I L+ ++   G+  D +TF  V  + +   +   G Q+HG I+K GF     V N L+ 
Sbjct: 28  SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVA 87

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
           FY +   +   R+VFDEM+ER+V+SW S+I       L ++ + +F +M+  GI+ +  T
Sbjct: 88  FYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 147

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKA----NALMVNALVDMYMKCGAVDTAKQLF 297
           +V V + CA  + + LG  V      +G+KA         N L+DMY KCG +D+AK +F
Sbjct: 148 IVSVFAGCADSRLISLGRAV----HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 203

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
            E  DR++V   ++++ Y R GLA EA+ + +EM   G  PD  T+ + ++  A+   L 
Sbjct: 204 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 263

Query: 358 CGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
            G+  H ++  N L G+D  + N ++DMY KCG                           
Sbjct: 264 EGKRVHEWIKENDL-GFDIFVSNALMDMYAKCGS-------------------------- 296

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTM 475
                ++ A  VFSEM  +D ISWNT++GG ++     EA+ LF ++L E R   D  T+
Sbjct: 297 -----MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 351

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
             V  AC  L A D  + I+ YI +NG   D  +A +LVDM+A+CG    A  +F  +  
Sbjct: 352 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 411

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
           +D+ +WT  I    M G G++A+ LFN+M + GI+ D I FV +L ACSH GLV++GW  
Sbjct: 412 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 471

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           F  M     + P + HY C+VD+L R G L +A   I++MP+ P+  IWG+LL  C+ H 
Sbjct: 472 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 531

Query: 656 NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
           +V +A   AE++ EL+PE +G +VL++NIYA A KW  V R+R ++ ++G+RK PG S I
Sbjct: 532 DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 591

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           E+ G+V+ F +GD S+PE  NI + LR++  R+ + GY P     L+D +E EK+  L  
Sbjct: 592 EIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCG 651

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLAMA G+IS+     IRV KNLR+C DCH  AK +SK+  REI++RD+NRFH F+ 
Sbjct: 652 HSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKD 711

Query: 836 GSCSCSDFW 844
           G CSC  FW
Sbjct: 712 GHCSCRGFW 720



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 164/511 (32%), Positives = 255/511 (49%), Gaps = 46/511 (9%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           S  + ++++  +Q H  ILK G G + S  + +V    +    +S   A+K FD      
Sbjct: 53  SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS---ARKVFD-----E 104

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
            T   +  +NS+I GY   GL  + +S++V++   GI  D  T   V   C  S     G
Sbjct: 105 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 164

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             VH   VK  F R+    N L++ Y +CGD+   + VF EMS+R+VVS+TS+I   AR 
Sbjct: 165 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 224

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            L  EAV LF EM EEGI P+  T+  V++ CA+ + L+ G RV  +I E  +  +  + 
Sbjct: 225 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 284

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           NAL+DMY KCG++  A+ +F E + ++++  NTI+  Y +   A EAL++ + +LL   R
Sbjct: 285 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN-LLLEEKR 343

Query: 338 --PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
             PD  T+   + A A L     GR  HGY++RNG      + N+++DMY KCG   +A 
Sbjct: 344 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 403

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            +FD +++K +VSW  +IAG   +G                                 +E
Sbjct: 404 MLFDDIASKDLVSWTVMIAGYGMHG-------------------------------FGKE 432

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQLATAL 513
           A+ LF  M    I+ D ++ V +  AC + G +D   W +  I ++   I   ++    +
Sbjct: 433 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVD-EGWRFFNIMRHECKIEPTVEHYACI 491

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTA 543
           VDM AR GD  +A +    M    D + W A
Sbjct: 492 VDMLARTGDLIKAYRFIENMPIPPDATIWGA 522



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 235/497 (47%), Gaps = 65/497 (13%)

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FDE+     + W  L+   A+      ++ LF +M+  G++ +S T  CV  + + L+++
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
             G+++  +I + G      + N+LV  Y+K   VD+A+++F E  +R+++  N+I++ Y
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           V  GLA + L++  +ML+ G   D  T++S  +  A    +  GR  H   ++      D
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
             CNT++DMY KCG  + A  +F  MS+++VVS+ S+IAG  + G               
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG--------------- 225

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                   L G        EA++LF  M  E I  D  T+  V + C     LD  K ++
Sbjct: 226 --------LAG--------EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 269

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
            +I++N +  D+ ++ AL+DM+A+CG  Q A  VF  M  +D+ +W   IG  +      
Sbjct: 270 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 329

Query: 556 QAVELFNEMLRQG-IKPDSIVFVGVLTACS-----------HGGLVNQGW----HLFRSM 599
           +A+ LFN +L +    PD      VL AC+           HG ++  G+    H+  S+
Sbjct: 330 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 389

Query: 600 TDIHG---------------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPND 641
            D++                 S  +V +  M+   G  G   EA+ L   M    +E ++
Sbjct: 390 VDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 449

Query: 642 VIWGSLLAACQKHQNVD 658
           + + SLL AC     VD
Sbjct: 450 ISFVSLLYACSHSGLVD 466


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 270/687 (39%), Positives = 407/687 (59%), Gaps = 68/687 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF+ + E N++ W +++   A    P  A+ ++  MV  G  PNS +   ++ +CAK + 
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD----------------------- 291
            E G ++ A + +LG   +  +  +L+ MY + G ++                       
Sbjct: 80  FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139

Query: 292 --------TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
                   +A+++F E  +R++V  N +++ YV  G   EAL +  EM+    RPD  T+
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLR----NGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           +S VSA AQ G +  GR  H +V      +G      I N +ID+Y KCG          
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG---------- 249

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                DVE+A  +F  +  +D +SWNT++GG T  N+++EA+ L
Sbjct: 250 ---------------------DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLL 288

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQLATALVDMF 517
           F+ ML      + VT++ V  AC +LGA+D+ +WI+ YI+K   G+  +  L T+L+DM+
Sbjct: 289 FQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMY 348

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CGD + A QVF  M  R +S+W A I   AM G    A +LF+ M    ++PD I FV
Sbjct: 349 AKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFV 408

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           G+L+ACSH GL++ G  +F+SMT  + ++P++ HYGCM+DLLG +GL  EA ++I +MP+
Sbjct: 409 GLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPM 468

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           EP+ VIW SLL AC+KH N+++A   A+++ +++PE SG +VLLSNIYA+AG+W +VARV
Sbjct: 469 EPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARV 528

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  +  +G++K+PG SSIEV+  VHEF  GD+ HP    I  ML EM+ +L +AG+ PD 
Sbjct: 529 RGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDT 588

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
           + VL +++E+ K+  L HHSEKLA+AFGLIST     + +VKNLR+C +CH   KL+SK+
Sbjct: 589 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 648

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
           Y REI+ RD  RFH FR G CSC D+W
Sbjct: 649 YKREIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 164/539 (30%), Positives = 272/539 (50%), Gaps = 77/539 (14%)

Query: 74  CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
           C     F+ L YA   F+   + N     L ++N+++RG++     V A+ +YV +   G
Sbjct: 5   CVVSPHFDGLPYAISVFETIQEPN-----LLIWNTMLRGHASSSDPVSALEMYVRMVSLG 59

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG------------------------- 168
            LP+ ++FPF+L +C KS AF EG Q+H  ++K+G                         
Sbjct: 60  HLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDAR 119

Query: 169 --FD----RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             FD    RDV     LI  Y   GD    R+VFDE++ER+VVSW ++I         +E
Sbjct: 120 KVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEE 179

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----GMKANALMVN 278
           A+ LF EM+   ++P+  T+V V+SACA+  ++ELG +V +++D+     G  ++  +VN
Sbjct: 180 ALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVN 239

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           AL+D+Y KCG V+TA  LF     +++V  NT++  Y    L +EAL +  EML  G  P
Sbjct: 240 ALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP 299

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACR 396
           + VT+LS + A A LG +  GR  H Y+ +   G+    S+  ++IDMY KCG  E A +
Sbjct: 300 NDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQ 359

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F+ M  +++ SWN++I G   +G   +A ++FS M G                      
Sbjct: 360 VFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRG---------------------- 397

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVD 515
                     R++ D +T VG+ SAC + G LDL + I+  + ++  +   ++    ++D
Sbjct: 398 ---------NRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMID 448

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +    G  + A ++   M  + D   W + + A    GN E A     ++++  I+P++
Sbjct: 449 LLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIK--IEPEN 505



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 199/417 (47%), Gaps = 41/417 (9%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F   ++ NL++ NT++  +        AL +   M+  G  P+  +    + + A+
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
                 GR  H  VL+ G  G D   +T +I MY + G  E A ++FD  S++ VVS  +
Sbjct: 77  SKAFEEGRQIHAQVLKLGC-GLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTA 135

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           LI G    GD  SAR+VF E+  RD +SWN M+ G  +   +EEA+ELF+ M+   ++ D
Sbjct: 136 LITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195

Query: 472 RVTMVGVASACGYLGALDLAK----WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
             T+V V SAC   G+++L +    W+    + +G    +++  AL+D++++CGD + A 
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            +F  +  +DV +W   IG        ++A+ LF EMLR G  P+ +  + VL AC+H G
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315

Query: 588 LVNQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM----------- 635
            ++ G W        + GV+ +      ++D+  + G +  A  +  SM           
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375

Query: 636 -----------------------PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
                                   VEP+D+ +  LL+AC     +D+     + +T+
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ 432



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 199/434 (45%), Gaps = 49/434 (11%)

Query: 39  LKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD---- 91
           LK+C   K   E +Q H  +LK G G      + ++   A+ G  E    A+K FD    
Sbjct: 71  LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLED---ARKVFDASSH 127

Query: 92  ----------------------YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
                                   + D  T   +  +N++I GY   G   EA+ L+ E+
Sbjct: 128 RDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEM 187

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM----GFDRDVFVENCLINFYGE 185
               + PD+ T   V++AC +S +   G QVH  +       GF   + + N LI+ Y +
Sbjct: 188 MRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSK 247

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
           CGD+     +F+ +S ++VVSW +LI      +L KEA+ LF EM+  G  PN VT++ V
Sbjct: 248 CGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSV 307

Query: 246 ISACAKLQNLELGDRVCAYIDE--LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
           + ACA L  +++G  +  YID+   G+     +  +L+DMY KCG ++ A Q+F     R
Sbjct: 308 LPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR 367

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR--- 360
           +L   N ++  +   G A  A  +   M  +   PD +T +  +SA +  G L  GR   
Sbjct: 368 SLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIF 427

Query: 361 --MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLI 417
             M   Y L   LE +      MID+    G  + A  +   M      V W SL+    
Sbjct: 428 KSMTQDYNLTPKLEHY----GCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACK 483

Query: 418 KNGDVESAREVFSE 431
           K+G++E A E F++
Sbjct: 484 KHGNLELA-ESFAQ 496


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/808 (34%), Positives = 455/808 (56%), Gaps = 42/808 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L N  TL++L Q    ++  G+ +  S I+K+      +G   ++ + ++ F+   K + 
Sbjct: 21  LNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLG---AVAHVRQLFNKVSKPD- 76

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEG 157
               LF++N LIRG+S  GL   +I LY  L     L PD FT+ F ++A ++      G
Sbjct: 77  ----LFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVG 132

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           V +H   +  G   ++FV + +++ Y +       R+VFD M ER+ V W ++I   +R 
Sbjct: 133 VLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRN 192

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
              ++++ +F +M++ G+  +S T+  V++A A+LQ   LG  +     + G+ ++  ++
Sbjct: 193 SYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL 252

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
             L+ +Y KCG     + LF +    +L+  N ++S Y        A+ +  E+L  G R
Sbjct: 253 TGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQR 312

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            +  T++  +        L   R+     L+ G+    S+   +  +Y         CR+
Sbjct: 313 VNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVY---------CRL 363

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                  +V+ AR++F E P +   SWN M+ G TQ  + + A+
Sbjct: 364 ----------------------NEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAI 401

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF+ M+ + +  + VT+  + SAC  LGAL + KW++  I+   +  ++ ++TALVDM+
Sbjct: 402 SLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMY 460

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG    A Q+F  M  ++V  W A I    + G+G++A++LF EML+ GI P  + F+
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFL 520

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            +L ACSH GLV++G  +F SM + +G  P   HY CMVD+LGRAG L  AL+ I+ MP+
Sbjct: 521 SILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPL 580

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           EP   +WG+LL AC  H+N ++A  A++R+ +LDPE  G +VLLSNIY++   +   A V
Sbjct: 581 EPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASV 640

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD- 756
           R  +K++ + K PG + IE++ + + FTSGD SHP+   I  ML ++  ++R+AGY  + 
Sbjct: 641 RQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAET 700

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           +T  L DV+++EK+ +++ HSEKLA+AFGLIST     IR++KNLR+C DCH+  K +SK
Sbjct: 701 VTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISK 760

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + +R I+VRD NRFH F+ G CSC D+W
Sbjct: 761 ITERVIVVRDANRFHHFKNGICSCGDYW 788


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 320/891 (35%), Positives = 469/891 (52%), Gaps = 97/891 (10%)

Query: 5   LNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKP 64
           L P P +L    +TT      + TT   S        CK+L   +  H  +L QGL H P
Sbjct: 27  LKPKPPLL---FLTTFFFSTASSTTDLTSTL---FHQCKSLASAELTHQQLLVQGLPHDP 80

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           ++I  +  T      F S     KA     + + +S T+F +N LIR    +G   + + 
Sbjct: 81  THIISMYLT------FNS---PAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQ 131

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           LY  +   G  PD +TFPFVL AC +  +F  G  VH  +   GF+ +VFV N L++ YG
Sbjct: 132 LYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYG 191

Query: 185 ECGDIVDGRRVFDEMSERNV---VSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSV 240
            CG   + R+VFDEM ER V   VSW S++ A  +      A+ +F  M E+ GI+P++V
Sbjct: 192 RCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAV 251

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           ++V V+ ACA +     G +V  Y    G+  +  + NA+VDMY KCG ++ A ++F   
Sbjct: 252 SLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERM 311

Query: 301 K-----------------------------------DRNLVLCNTIMSNYVRLGLAREAL 325
           K                                   + N+V  + +++ Y + GL  EAL
Sbjct: 312 KVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEAL 371

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE------GWD-SIC 378
            +  +MLL G  P+ VT++S +S  A  G LL G+  H + ++  L       G D  + 
Sbjct: 372 DVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVI 431

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH- 437
           N +IDMY KC   +                               +AR +F  +P +D  
Sbjct: 432 NALIDMYSKCKSPK-------------------------------AARAMFDLIPPKDRS 460

Query: 438 -ISWNTMLGGLTQENMFEEAMELFRVMLSER--IKVDRVTMVGVASACGYLGALDLAKWI 494
            ++W  ++GG  Q     EA+ELF  ML     +  +  T+     AC  LGAL   + I
Sbjct: 461 VVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQI 520

Query: 495 YAYIEKNGIHCDMQL-ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           +AY+ +N     M   A  L+DM+++ GD   A  VF  M +R+  +WT+ +    M G 
Sbjct: 521 HAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGR 580

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           GE+A+++F EM +  + PD + FV VL ACSH G+V+QG + F  M    GV P   HY 
Sbjct: 581 GEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYA 640

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVDLL RAG L EA++LI+ MP++P   +W +LL+AC+ + NV++  YAA ++ EL+  
Sbjct: 641 CMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESG 700

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G + LLSNIYA+A  W +VAR+R  MK  GI+K PG S ++       F +GD SHP 
Sbjct: 701 NDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPM 760

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I  +LR++  R++  GYVPD    L DVD++EK  LLS HSEKLA+A+G+++T+   
Sbjct: 761 SQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGA 820

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           PIR+ KNLR C DCHS    +S + + EIIVRD++RFH F+ GSCSC  +W
Sbjct: 821 PIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 296/809 (36%), Positives = 447/809 (55%), Gaps = 48/809 (5%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           SLK+ K ++   + +  +L   LG K   ++ +   C        L  A + FD      
Sbjct: 109 SLKDGKEVDNFIRGNGFVLDSNLGSK---LALMYTNCGD------LKEASRVFDQV---- 155

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
           +    LF +N L+   +  G    +I L+ ++   G+  D +TF  V  + +   +   G
Sbjct: 156 KIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGG 214

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
            Q+HG I+K GF     V N L+ FY +   +   R+VFDEM+ER+V+SW S+I      
Sbjct: 215 EQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            L ++ + +F +M+  GI+ +  T+V V + CA  + + LG  V  +  +          
Sbjct: 275 GLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFC 334

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N L+DMY KCG +D+AK +F E   R++V   ++++ Y R GLA EA+ + +EM   G  
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACR 396
           PD  T+ + ++  A+   L  G+  H ++  N + G+D  + N ++DMY KCG       
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDM-GFDIFVSNALMDMYAKCGS------ 447

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    +  A  VFSEM  +D ISWNT++GG ++     EA
Sbjct: 448 -------------------------MREAELVFSEMRVKDIISWNTVIGGYSKNCYANEA 482

Query: 457 MELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           + LF ++L E R   D  T+  V  AC  L A D  + I+ YI +NG   D  +A +LVD
Sbjct: 483 LSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+A+CG    A  +F  +  +D+ +WT  I    M G G++A+ LFN+M + GI+PD I 
Sbjct: 543 MYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEIS 602

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FV +L ACSH GLV++GW  F  M     + P + HY C+VD+L R G L +A   I++M
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENM 662

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P+ P+  IWG+LL  C+ H +V +A   AE++ EL+PE +G +VL++NIYA A KW  V 
Sbjct: 663 PIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVK 722

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           R+R ++ ++G+RK PG S IE+ G+V+ F +GD S+PE   I + LR +  R+ + GY P
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSP 782

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
                L+D +E EK+  L  HSEKLAMA G+IS+     IRV KNLR+C DCH  AK +S
Sbjct: 783 LTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMS 842

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+  REI++RD+NRFH F+ G CSC  FW
Sbjct: 843 KLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 261/556 (46%), Gaps = 65/556 (11%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D  T   VL  C  S +  +G +V   I   GF  D  + + L   Y  CGD+ +  RVF
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           D++     + W  L+   A+      ++ LF +M+  G++ +S T  CV  + + L+++ 
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
            G+++  YI + G      + N+LV  Y+K   VD+A+++F E  +R+++  N+I++ YV
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
             GLA + L++  +ML  G   D  T++S  +  A    +  GR  H + ++      D 
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
            CNT++DMY KCG  + A  +F  MS ++VVS+ S+IAG  + G                
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREG---------------- 376

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                  L G        EA++LF  M  E I  D  T+  V + C     LD  K ++ 
Sbjct: 377 -------LAG--------EAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHE 421

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           +I++N +  D+ ++ AL+DM+A+CG  + A  VF  M  +D+ +W   IG  +      +
Sbjct: 422 WIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANE 481

Query: 557 AVELFNEML-RQGIKPDSIVFVGVLTACS-----------HGGLVNQGW----HLFRSMT 600
           A+ LFN +L  +   PD      VL AC+           HG ++  G+    H+  S+ 
Sbjct: 482 ALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 601 DIHG---------------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDV 642
           D++                 S  +V +  M+   G  G   EA+ L   M    +EP+++
Sbjct: 542 DMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEI 601

Query: 643 IWGSLLAACQKHQNVD 658
            + SLL AC     VD
Sbjct: 602 SFVSLLYACSHSGLVD 617



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           NT L    +    + A++L  V  S +  +D  T+  V   C    +L   K +  +I  
Sbjct: 65  NTQLRRFCESGNLKNAVKLLHV--SGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           NG   D  L + L  M+  CGD + A +VF +++      W   +  +A  G+   ++ L
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
           F +M+  G++ DS  F  V  + S    VN G  L
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQL 217


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/697 (38%), Positives = 409/697 (58%), Gaps = 35/697 (5%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           + + G + D R VF EM ER+ VSWT ++    R     EA+    +M  +G  P   T+
Sbjct: 2   FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG-------------- 288
             V+S+CA  Q   +G +V +++ +LG+ +   + N++++MY KCG              
Sbjct: 62  TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121

Query: 289 -----------------AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
                             +D A+ LF    DR++V  N +++ Y + GL  +AL +   M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181

Query: 332 LLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           L      PD  T+ S +SA A LG++  G+  H Y+LR  +     + N +I  Y K G 
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 241

Query: 391 QEMACRIFDHM--SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
            E A RI D    ++  V+S+ +L+ G +K GD+ESARE+F  M  RD ++W  M+ G  
Sbjct: 242 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 301

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           Q    +EA++LFR M++   + +  T+  V S C  L  LD  K I+    ++ +     
Sbjct: 302 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS 361

Query: 509 LATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
           ++ A++ M+AR G    A ++F ++  +++   WT+ I A+A  G GE+AV LF EMLR 
Sbjct: 362 VSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA 421

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G++PD I +VGVL+ACSH G VN+G   +  + + H ++P++ HY CMVDLL RAGL  E
Sbjct: 422 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 481

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A + I+ MPVEP+ + WGSLL+AC+ H+N ++A  AAE++  +DP  SG +  ++N+Y++
Sbjct: 482 AQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSA 541

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
            G+W++ AR+    KE+ +RK  G S   +  K+H F + D  HP+ + + +M   M   
Sbjct: 542 CGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEE 601

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           ++ AG+VPDL +VL DVD++ K+ LLS HSEKLA+AFGLIST +   +RV+KNLR+C DC
Sbjct: 602 IKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDC 661

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H+  K +SKV DREIIVRD  RFH FR G CSC D+W
Sbjct: 662 HAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 233/528 (44%), Gaps = 100/528 (18%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +  ++ G +  G   EAI   +++   G  P +FT   VL++C  + A   G +VH  +V
Sbjct: 26  WTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVV 85

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDE--------------------------- 198
           K+G    V V N ++N YG+CGD      VF+                            
Sbjct: 86  KLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAES 145

Query: 199 ----MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQ 253
               M +R++VSW ++I    +  L  +A+ LF  M+ E  + P+  T+  V+SACA L 
Sbjct: 146 LFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLG 205

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV----------------------- 290
           N+ +G +V AYI    M  N+ + NAL+  Y K G+V                       
Sbjct: 206 NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTAL 265

Query: 291 ----------DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                     ++A+++FG   +R++V    ++  Y + G   EA+ +   M+  GP P+ 
Sbjct: 266 LEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNS 325

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T+ + +S  A L  L  G+  H   +R+ LE   S+ N +I MY + G    A R+FD 
Sbjct: 326 YTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQ 385

Query: 401 MS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
           +   K  ++W S+I  L ++G                                 EEA+ L
Sbjct: 386 VCWRKETITWTSMIVALAQHGQ-------------------------------GEEAVGL 414

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFA 518
           F  ML   ++ DR+T VGV SAC + G ++  K  Y  I+ ++ I  +M     +VD+ A
Sbjct: 415 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 474

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           R G    A +  RRM  + D  AW + + A  +  N E A EL  E L
Sbjct: 475 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA-ELAAEKL 521



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 190/407 (46%), Gaps = 37/407 (9%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           M+ K G +  A+ +F E  +R+ V    ++    R G   EA+  L +M   G  P + T
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + + +S+ A       GR  H +V++ GL     + N++++MY KCG  E A  +F+ M 
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            ++V SWN++++     G ++ A  +F  MP R  +SWN M+ G  Q  +  +A++LF  
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 463 MLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC- 520
           ML E  +  D  T+  V SAC  LG + + K ++AYI +  +  + Q+  AL+  +A+  
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 521 --------------------------------GDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
                                           GD + A ++F  M  RDV AWTA I   
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF-RSMTDIHGVSP 607
              G  ++A++LF  M+  G +P+S     VL+ C+    ++ G  +  R++  +   S 
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            + +   ++ +  R+G    A  +   +      + W S++ A  +H
Sbjct: 361 SVSN--AIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 405



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 168/382 (43%), Gaps = 68/382 (17%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
           ++  +N++I GY+  GL  +A+ L+   L    + PD+FT   VL+AC        G QV
Sbjct: 154 SIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQV 213

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE---------------------- 198
           H  I++     +  V N LI+ Y + G + + RR+ D+                      
Sbjct: 214 HAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIG 273

Query: 199 -----------MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                      M+ R+VV+WT++I    +     EA+ LF  M+  G +PNS T+  V+S
Sbjct: 274 DMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 333

Query: 248 ACAKLQNLELGDRV-CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNL 305
            CA L  L+ G ++ C  I  L ++ ++ + NA++ MY + G+   A+++F + C  +  
Sbjct: 334 VCASLACLDYGKQIHCRAIRSL-LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 392

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           +   +++    + G   EA+ + +EML  G  PDR+T +  +SA +  G           
Sbjct: 393 ITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG----------- 441

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
            +  G   +D I N                   +H     +  +  ++  L + G    A
Sbjct: 442 FVNEGKRYYDQIKN-------------------EHQIAPEMSHYACMVDLLARAGLFSEA 482

Query: 426 REVFSEMPGR-DHISWNTMLGG 446
           +E    MP   D I+W ++L  
Sbjct: 483 QEFIRRMPVEPDAIAWGSLLSA 504



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 176/427 (41%), Gaps = 93/427 (21%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           H++   P +      L  C  L  +   KQ H +IL+  + +     + ++ T A+ G+ 
Sbjct: 183 HESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSV 242

Query: 81  ESLTYAQKAFDY-----------------YIK--DNETSATLF---------MYNSLIRG 112
           E+   A++  D                  Y+K  D E++  +F          + ++I G
Sbjct: 243 EN---ARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299

Query: 113 YSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD 172
           Y   G   EAI L+  +   G  P+ +T   VL+ C   +    G Q+H   ++   ++ 
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERN-VVSWTSLICACARRDLPKEAVYLFFEMV 231
             V N +I  Y   G     RR+FD++  R   ++WTS+I A A+    +EAV LF EM+
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
             G++P+ +T V V+SAC+                                     G V+
Sbjct: 420 RAGVEPDRITYVGVLSACS-----------------------------------HAGFVN 444

Query: 292 TAKQLFGECKDRNLVLCNTIMSNY-------VRLGLAREALAILDEMLLHGPRPDRV--- 341
             K+ + + K+ + +     MS+Y        R GL  EA   +  M +    PD +   
Sbjct: 445 EGKRYYDQIKNEHQIAPE--MSHYACMVDLLARAGLFSEAQEFIRRMPVE---PDAIAWG 499

Query: 342 TMLSA--VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           ++LSA  V  +A+L +L   ++    +  N    + +I N    +Y  CG+   A RI+ 
Sbjct: 500 SLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIAN----VYSACGRWSDAARIWK 553

Query: 400 HMSNKTV 406
               K V
Sbjct: 554 ARKEKAV 560


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 320/891 (35%), Positives = 469/891 (52%), Gaps = 97/891 (10%)

Query: 5   LNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKP 64
           L P P +L    +TT      + TT   S        CK+L   +  H  +L QGL H P
Sbjct: 8   LKPKPPLL---FLTTFFFSTASSTTDLTSTL---FHQCKSLASAELIHQQLLVQGLPHDP 61

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           ++I  +  T      F S     KA     + + +S T+F +N LIR    +G   + + 
Sbjct: 62  THIISMYLT------FNS---PAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQ 112

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           LY  +   G  PD +TFPFVL AC +  +F  G  VH  +   GF+ +VFV N L++ YG
Sbjct: 113 LYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYG 172

Query: 185 ECGDIVDGRRVFDEMSERNV---VSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSV 240
            CG   + R+VFDEM ER V   VSW S++ A  +      A+ +F  M E+ GI+P++V
Sbjct: 173 RCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAV 232

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           ++V V+ ACA +     G +V  Y    G+  +  + NA+VDMY KCG ++ A ++F   
Sbjct: 233 SLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERM 292

Query: 301 K-----------------------------------DRNLVLCNTIMSNYVRLGLAREAL 325
           K                                   + N+V  + +++ Y + GL  EAL
Sbjct: 293 KVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEAL 352

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE------GWD-SIC 378
            +  +M L G  P+ VT++S +S  A  G LL G+  H + ++  L       G D  + 
Sbjct: 353 DVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVI 412

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH- 437
           N +IDMY KC   +                               +AR +F  +P +D  
Sbjct: 413 NALIDMYSKCKSPK-------------------------------AARAMFDLIPPKDRS 441

Query: 438 -ISWNTMLGGLTQENMFEEAMELFRVMLSER--IKVDRVTMVGVASACGYLGALDLAKWI 494
            ++W  ++GG  Q     EA+ELF  ML     +  +  T+     AC  LGAL   + I
Sbjct: 442 VVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQI 501

Query: 495 YAYIEKNGIHCDMQL-ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           +AY+ +N     M   A  L+DM+++ GD   A  VF  M +R+  +WT+ +    M G 
Sbjct: 502 HAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGR 561

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           GE+A+++F EM + G+ PD + FV VL ACSH G+V+QG + F  M    GV P   HY 
Sbjct: 562 GEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYA 621

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVDLL RAG L EA++LI+ MP++P   +W +LL+AC+ + NV++  YAA ++ EL+  
Sbjct: 622 CMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESG 681

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G + LLSNIYA+A  W +VAR+R  MK  GI+K PG S ++       F +GD SHP 
Sbjct: 682 NDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPM 741

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I  +LR++  R++  GYVPD    L DVD++EK  LLS HSEKLA+A+G+++T+   
Sbjct: 742 SQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGA 801

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           PIR+ KNLR C DCHS    +S + + EIIVRD++RFH F+ GSCSC  +W
Sbjct: 802 PIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/805 (35%), Positives = 458/805 (56%), Gaps = 60/805 (7%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
             + L+Q H  I+   L H   +++ ++  C ++        A   + + + ++  +  +
Sbjct: 13  NFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRL-------RAPPHYTHLLFNSTLNPNV 65

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F++ S++R YS +    + + ++  + G G+ PD F +P ++      SA   G+  H  
Sbjct: 66  FVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIK-----SAGNGGIGFHAH 120

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS--ERNVVSWTSLICACARRDLPK 221
           ++K+G   D FV N +I+ Y   G I   R+VFDE+   ER V  W +++    + +   
Sbjct: 121 VLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEG 180

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           +A +LF  M E     N +T   +++  AK+++L                          
Sbjct: 181 QAQWLFDVMPER----NVITWTAMVTGYAKVKDL-------------------------- 210

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
                    + A++ F    +R++V  N ++S Y + GLA E L + DEM+  G  PD  
Sbjct: 211 ---------EAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDET 261

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T ++ +SA +  GD          + +  ++    +   ++DMY KCG    A RIFD +
Sbjct: 262 TWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDEL 321

Query: 402 -SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
            + +  V+WN++I+   + G+++SARE+F+ MPGR+ ++WN+M+ G  Q      A+ELF
Sbjct: 322 GAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 381

Query: 461 RVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           + M++ +++  D VTMV V SACG+LGAL+L  W+  ++ +N I   +    A++ M++R
Sbjct: 382 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 441

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG  + A +VF+ M  RDV ++   I   A  G+G +A+ L + M   GI+PD + F+GV
Sbjct: 442 CGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGV 501

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           LTACSH GL+ +G  +F S+ D     P I HY CMVDLLGR G L +A   ++ MP+EP
Sbjct: 502 LTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEP 556

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
           +  ++GSLL A + H+ V++   AA ++ EL+P+ SG  +LLSNIYASAG+W +V R+R 
Sbjct: 557 HAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIRE 616

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            MK+ G++K  G S +E  GK+H+F   D SH   ++I  +L E+  ++R+AGY+ D + 
Sbjct: 617 AMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSC 676

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           VL DV+E+EK+ ++  HSEKLA+ + L+ +     IRVVKNLR+C DCH+  K++SK+  
Sbjct: 677 VLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEG 736

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           R IIVRDNNRFH F  G CSC D+W
Sbjct: 737 RVIIVRDNNRFHCFNDGLCSCKDYW 761


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 276/714 (38%), Positives = 410/714 (57%), Gaps = 39/714 (5%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRR 194
           PD FTFP ++ A    ++     Q+H   +++G    +VF    L++ Y   G + +  R
Sbjct: 67  PDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFDEM ER+V +W +++    R     +AV L   MV EG+  ++VT+  V+  C  L +
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
             L   +  Y  + G+     + NAL+D+Y K G +  A  +FG    R+LV  N+I+S 
Sbjct: 184 RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA 243

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
             + G    A+ +   M+  G  PD +T++S  SA AQ GD L  +  H YV R G +  
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVG 303

Query: 375 DSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
           D I  N M+DMY K  K                               +++A++VF  +P
Sbjct: 304 DIIAGNAMVDMYAKMSK-------------------------------IDAAQKVFDNLP 332

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAK 492
            RD +SWNT++ G  Q  +  EA+ ++  M + E +K  + T V V  A  YLG L    
Sbjct: 333 DRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGM 392

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++A   K G++ D+ + T L+D++A+CG    AM +F  M +R    W A I  + + G
Sbjct: 393 RMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHG 452

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           +G +A+ LF++M ++ IKPD + FV +L ACSH GLV+QG   F  M  ++G+ P   HY
Sbjct: 453 HGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHY 512

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CMVD+LGRAG L EA + I+SMP++P+  +WG+LL AC+ H NV++   A++ + ELDP
Sbjct: 513 TCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDP 572

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG--DES 730
           E  G +VL+SN+YA  GKW  V  VR  ++ Q ++K PG SS+EV G V  F SG   E 
Sbjct: 573 ENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEP 632

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           HP+   I   L ++  +++ AGYVPD + VL DV+E EK+ +L++HSE+LA+AFG+I+T 
Sbjct: 633 HPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTP 692

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              P+ + KNLR+C DCHS  K +SK+ +REIIVRD NRFH F+ G CSC DFW
Sbjct: 693 PGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 231/478 (48%), Gaps = 37/478 (7%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L + + A  Y + D      +  +N+++ G        +A++L   + G G+  D  T  
Sbjct: 113 LRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLS 172

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL  C         + +H   VK G   ++FV N LI+ YG+ G + +   VF  M+ R
Sbjct: 173 SVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALR 232

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR-V 261
           ++V+W S+I A  +      AV LF  M+E G+ P+ +T+V + SA A+  + ELG + V
Sbjct: 233 DLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGD-ELGAKSV 291

Query: 262 CAYIDELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
             Y+   G     ++  NA+VDMY K   +D A+++F    DR++V  NT+++ Y++ GL
Sbjct: 292 HCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGL 351

Query: 321 AREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           A EA+ I ++M  H G +P + T +S + A + LG L  G   H   ++ GL     +  
Sbjct: 352 ANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTT 411

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            +ID+Y KCGK   A  +F+HM  ++   WN++IAGL  +G    A  +FS+M       
Sbjct: 412 CLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQ------ 465

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                                     E IK D VT V + +AC + G +D  +  +  ++
Sbjct: 466 -------------------------QEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQ 500

Query: 500 K-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
              GI    +  T +VDM  R G    A +  + M  K D + W A +GA  + GN E
Sbjct: 501 TVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVE 558


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 300/823 (36%), Positives = 445/823 (54%), Gaps = 75/823 (9%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL---AGFGILPDKFTFPFVLNACTKSS 152
           D  +S T+F +N+LI  Y   G   EA+ +Y  +   A  G+ PD  T   VL A     
Sbjct: 119 DGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEG 178

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNVVSWTSLI 211
               G +VHG  VK G DR  FV N LI  Y +CG +    RVF+ M + R+V SW S+I
Sbjct: 179 DGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMI 238

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
             C +  +  +A+ LF  M    +  NS T V V+  C +L  L LG  + A + + G +
Sbjct: 239 SGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSE 298

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            N +  NAL+ MY KCG VD+A ++F E  +++ +  N+++S YV+ GL  EA+  + EM
Sbjct: 299 VN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEM 357

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN------------ 379
           L  G +PD   ++S  SA   LG LL G+  H Y ++  L+    + N            
Sbjct: 358 LRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYI 417

Query: 380 -------------------TMIDMYMKCGKQEMACRIF----------DHMSNKTVVSW- 409
                              T+I  Y +  +   A  IF          D M   +++   
Sbjct: 418 EYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEAC 477

Query: 410 ------------------NSLIAGLIKN---------GDVESAREVFSEMPGRDHISWNT 442
                             N L+  ++KN         G+V  + ++F  +  +D ++W +
Sbjct: 478 SGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTS 537

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           M+       +  EA+ LF  M S  ++ D V +V +  A G L +L   K ++ ++ +  
Sbjct: 538 MINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRN 597

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
            H +  + ++LVDM++ CG    A++VF  ++ +D+  WTA I A  M G+G+QA++LF 
Sbjct: 598 FHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFK 657

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
            ML+ G+ PD + F+ +L ACSH  LVN+G      M   + + P   HY C+VDLLGR+
Sbjct: 658 RMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRS 717

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G   EA + IKSMP++P  V+W SLL AC+ H+N ++A  AA R+ EL+P+  G +VL+S
Sbjct: 718 GQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVS 777

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           N++A  GKW N   VR ++ E+G+RK P  S IE+   VH FT+ D SH +   I+  L 
Sbjct: 778 NVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLA 837

Query: 743 EMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
           E+  RLR + GY  D  +VL DV E+EK  +L  HSE+LA++FGLI+T   MP+R+ KNL
Sbjct: 838 EITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNL 897

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH F KLVSK++DR+I+VRD NRFH F  GSCSC DFW
Sbjct: 898 RVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 254/556 (45%), Gaps = 70/556 (12%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF--DRDVFVENCLINFYGECGDIV 190
           G  P +  + +VL+      A  +GVQVH   V  G     D F+   L+  YG+CG + 
Sbjct: 53  GRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVA 112

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM---VEEGIKPNSVTMVCVIS 247
           D R +FD MS R V SW +LI A        EA+ ++  M      G+ P+  T+  V+ 
Sbjct: 113 DARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLK 172

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD-RNLV 306
           A     +   G  V     + G+  +  + NAL+ MY KCG +D+A ++F    D R++ 
Sbjct: 173 ASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVA 232

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
             N+++S  ++ G+  +AL +   M       +  T +  +    +L  L  GR  H  +
Sbjct: 233 SWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAAL 292

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           L++G E  +  CN ++ MY KCG+ + A R+F  +  K  +SWNS+++  ++NG      
Sbjct: 293 LKSGSE-VNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNG------ 345

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
                                    ++ EA+E    ML    + D   +V ++SA G+LG
Sbjct: 346 -------------------------LYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG 380

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
            L   K ++AY  K  +  D Q+   L+DM+ +C   + +  VF RM  +D  +WT  I 
Sbjct: 381 WLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIIT 440

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS--HGGLVNQGWHLF-------- 596
             A      +A+E+F E  ++GIK D ++   +L ACS     L+ +  H +        
Sbjct: 441 CYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLD 500

Query: 597 ----RSMTDIHGVSPQIVH---------------YGCMVDLLGRAGLLGEALDL---IKS 634
                 + DI+G   ++ H               +  M++    +GLL EAL L   ++S
Sbjct: 501 LVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQS 560

Query: 635 MPVEPNDVIWGSLLAA 650
             V+P+ V   S+L A
Sbjct: 561 TDVQPDSVALVSILGA 576


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/647 (40%), Positives = 390/647 (60%), Gaps = 53/647 (8%)

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
           P+ A+  +  M +  I+ +S  +  V+ AC+++    +G  +  +  + G+ ++  +VNA
Sbjct: 90  PRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNA 149

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL--GLAREALAILDEM------ 331
           L+ MY +CG++ +A+ LF +  +R++V  +T++  Y+ L  G ++ ++     M      
Sbjct: 150 LMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIR 209

Query: 332 ---LLHGPR-----------PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
              L  G R           P+ +TMLS + +   +G +  G+  H Y+LRNG     ++
Sbjct: 210 CNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLAL 269

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
              ++DMY KCG                               ++ SAR +F  M  +D 
Sbjct: 270 ATALVDMYGKCG-------------------------------EIRSARAIFDSMKNKDV 298

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           ++W  M+    Q N  + A +LF  M    ++ + +TMV + S C   GALD+ KW +AY
Sbjct: 299 MTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAY 358

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           I+K G+  D+ L TAL+DM+A+CGD   A ++F     RD+  W   +    M G GE+A
Sbjct: 359 IDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKA 418

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           ++LF EM   G+KP+ I F+G L ACSH GLV +G  LF  M    G+ P++ HYGCMVD
Sbjct: 419 LKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVD 478

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGRAGLL EA  +I+SMPV PN  IWG++LAAC+ H+N ++   AA  +  L+P+  G 
Sbjct: 479 LLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGY 538

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
            VL+SNIYA+A +W +VA +R  +K+ GI+K PG SSIEVNG VH+F  GD +HP +  I
Sbjct: 539 KVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKI 598

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
           S ML EM+ +L++AGY+PD + VL ++DE+EK+  L++HSEKLAMAFGLIST+   PIRV
Sbjct: 599 SEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRV 658

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VKNLR+C DCH+  KL+SK+Y R IIVRD NRFH FR+GSCSC  +W
Sbjct: 659 VKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 222/469 (47%), Gaps = 57/469 (12%)

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A++ Y  +    I  D F  P VL AC++ S    G ++HG  VK G   DVFV N L+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSW----------------------TSLICACARRDL 219
            Y ECG +V  R +FD+MSER+VVSW                      T++I    R + 
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            +E   LF  M+EE + PN +TM+ +I +C  +  ++LG R+ AYI   G   +  +  A
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           LVDMY KCG + +A+ +F   K+++++    ++S Y +      A  +  +M  +G RP+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIF 398
            +TM+S +S  A  G L  G+  H Y+ + G+E  D I  T +IDMY KCG    A R+F
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVE-VDVILKTALIDMYAKCGDISGAQRLF 391

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
               ++ + +WN ++AG   +G  E A ++F+EM           LG             
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEM---------ETLG------------- 429

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMF 517
                    +K + +T +G   AC + G +   K ++   I   G+   ++    +VD+ 
Sbjct: 430 ---------VKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLL 480

Query: 518 ARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
            R G    A ++   M    +++ W A + A  +  N         E+L
Sbjct: 481 GRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELL 529



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 182/342 (53%), Gaps = 14/342 (4%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           ++  + ++I GY       E   L+V +    + P+  T   ++ +C    A   G ++H
Sbjct: 196 SIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLH 255

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             I++ GF   + +   L++ YG+CG+I   R +FD M  ++V++WT++I A A+ +   
Sbjct: 256 AYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCID 315

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            A  LF +M + G++PN +TMV ++S CA    L++G    AYID+ G++ + ++  AL+
Sbjct: 316 YAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALI 375

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY KCG +  A++LF E  DR++   N +M+ Y   G   +AL +  EM   G +P+ +
Sbjct: 376 DMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDI 435

Query: 342 TMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           T + A+ A +  G ++ G     +M H + L   +E +      M+D+  + G  + A +
Sbjct: 436 TFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHY----GCMVDLLGRAGLLDEAYK 491

Query: 397 IFDHMS-NKTVVSWNSLIAG--LIKNGDVE--SAREVFSEMP 433
           + + M     +  W +++A   + KN ++   +ARE+ +  P
Sbjct: 492 MIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEP 533



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 9/249 (3%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K+ H +IL+ G G   +  + +V    + G   S   A+  FD     +  +  +  + +
Sbjct: 252 KRLHAYILRNGFGMSLALATALVDMYGKCGEIRS---ARAIFD-----SMKNKDVMTWTA 303

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +I  Y+       A  L+V++   G+ P++ T   +L+ C  + A   G   H  I K G
Sbjct: 304 MISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQG 363

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            + DV ++  LI+ Y +CGDI   +R+F E  +R++ +W  ++         ++A+ LF 
Sbjct: 364 VEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFT 423

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVDMYMKC 287
           EM   G+KPN +T +  + AC+    +  G  +    I + G+         +VD+  + 
Sbjct: 424 EMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRA 483

Query: 288 GAVDTAKQL 296
           G +D A ++
Sbjct: 484 GLLDEAYKM 492


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/702 (36%), Positives = 429/702 (61%), Gaps = 1/702 (0%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDV-FVENCLINFYGECGDIVDGRRVFDEMSER 202
           + +A + +++     QVH  I++   DR    +   +I+       +     VF+ + + 
Sbjct: 26  LFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKP 85

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
                   +   +R + P++ + ++  M  +G+  +  +   ++ A +++++L  G  + 
Sbjct: 86  ETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIH 145

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
               +LG  ++  +   LV MY  CG +  A+ +F +   R++V  + ++  Y + GL  
Sbjct: 146 GLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFN 205

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +AL + +EM  +   PD + + + +SA  + G+L  G+M H +++ N +     + + ++
Sbjct: 206 DALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALV 265

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY  CG  ++A  +F+ M+ K +V+  +++ G  K G +E+AR VF++M  +D + W+ 
Sbjct: 266 TMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSA 325

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           M+ G  + +  +EA+ LF  M S  IK D+VTM+ V +AC +LGALD AKWI+ +++KNG
Sbjct: 326 MISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNG 385

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
               + +  AL++M+A+CG  +RA ++F +M +++V +WT  I A AM G+   A+  F+
Sbjct: 386 FGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFH 445

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           +M  + I+P+ I FVGVL ACSH GLV +G  +F SM + H ++P+ VHYGCMVDL GRA
Sbjct: 446 QMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRA 505

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
            LL EAL+L+++MP+ PN +IWGSL+AAC+ H  +++  +AA+R+ ELDP+  G HV LS
Sbjct: 506 NLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLS 565

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           NIYA A +W +V +VR  MK +GI K  G S  E+N ++HEF   D SH   + I   L 
Sbjct: 566 NIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLY 625

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           E+  +L+  GY P+  ++L+D++E+EKK ++  HSEKLA+ +GL+       IR++KNLR
Sbjct: 626 EVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLR 685

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH+F KL SKVY+REI+VRD  RFH ++ G CSC D+W
Sbjct: 686 VCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 259/553 (46%), Gaps = 71/553 (12%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
             +L +  +L  LKQ H  IL+  L    S + K+V +   + +  SL YA   F+  I 
Sbjct: 27  FSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSS--SLDYALSVFNL-IP 83

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
             ET     + N  +R  S      + + +Y  +   G+  D+F+FP +L A ++  +  
Sbjct: 84  KPETH----LCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLV 139

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           EG+++HG   K+GFD D FV+  L+  Y  CG I + R +FD+M  R+VV+W+ +I    
Sbjct: 140 EGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYC 199

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +  L  +A+ LF EM    ++P+ + +  V+SAC +  NL  G  +  +I E  +  +  
Sbjct: 200 QSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPH 259

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL--------------- 320
           + +ALV MY  CG++D A  LF +   +NLV    +++ Y +LG                
Sbjct: 260 LQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKD 319

Query: 321 ----------------AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
                            +EAL + +EM   G +PD+VTMLS ++A A LG L   +  H 
Sbjct: 320 LVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHL 379

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           +V +NG  G   I N +I+MY KCG  E A RIFD M  K V+SW  +I+    +GD  S
Sbjct: 380 FVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGS 439

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A   F +M                                 E I+ + +T VGV  AC +
Sbjct: 440 ALRFFHQME-------------------------------DENIEPNGITFVGVLYACSH 468

Query: 485 LGALDLAKWI-YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWT 542
            G ++  + I Y+ I ++ I         +VD+F R    + A+++   M    +V  W 
Sbjct: 469 AGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWG 528

Query: 543 AAIGAMAMEGNGE 555
           + + A  + G  E
Sbjct: 529 SLMAACRVHGEIE 541


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 312/918 (33%), Positives = 451/918 (49%), Gaps = 153/918 (16%)

Query: 39  LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L+ C+ L  L+   Q H  ++  G+       S+++    Q G  E    A++ FD   +
Sbjct: 96  LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED---ARRMFDKMSE 152

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL---------- 145
            N     +F + +++  Y  +G   E I L+  +   G+ PD F FP V           
Sbjct: 153 RN-----VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYR 207

Query: 146 ----------------NACTKSS-------------------------AFGEGVQVHGAI 164
                           N+C K S                          F   + V G  
Sbjct: 208 VGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYT 267

Query: 165 VKMGFDR---------------DVFVENCLINFYGECGDIVDGRRVFDEMS-----ERNV 204
            K  F +               D    N +I+ Y + G   +  + F EM      + NV
Sbjct: 268 SKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNV 327

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV--- 261
           VSWT+LI    +     EA+ +F +MV EG+KPNS+T+   +SAC  L  L  G  +   
Sbjct: 328 VSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGY 387

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
           C  ++EL   ++ L+ N+LVD Y KC +V+ A++ FG  K  +LV  N +++ Y   G  
Sbjct: 388 CIKVEEL--DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGD-------------------------- 355
            EA+ +L EM   G  PD +T    V+   Q GD                          
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505

Query: 356 ---------LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
                    L  G+  HGYVLRN +E    + + +I MY  C   E+AC           
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVAC----------- 554

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                                VFSE+  RD + WN+++    Q      A++L R M   
Sbjct: 555 --------------------SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS 594

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            ++V+ VTMV    AC  L AL   K I+ +I + G+     +  +L+DM+ RCG  Q++
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKS 654

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            ++F  M +RD+ +W   I    M G G  AV LF +    G+KP+ I F  +L+ACSH 
Sbjct: 655 RRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHS 714

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GL+ +GW  F+ M   + + P +  Y CMVDLL RAG   E L+ I+ MP EPN  +WGS
Sbjct: 715 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 774

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+ H N D+A YAA  + EL+P+ SG +VL++NIY++AG+W + A++R  MKE+G+
Sbjct: 775 LLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGV 834

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            K PG S IEV  K+H F  GD SHP M  IS+ +  +   +++ GYVPD   VL DVDE
Sbjct: 835 TKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDE 894

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
            EK++ L  HSEK+A+AFGLIST+   P+R++KNLR+C DCHS  K +SKV  R+II+RD
Sbjct: 895 DEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRD 954

Query: 827 NNRFHFFRQGSCSCSDFW 844
           N RFH F  G CSC D+W
Sbjct: 955 NYRFHHFVDGVCSCGDYW 972



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 167/622 (26%), Positives = 275/622 (44%), Gaps = 113/622 (18%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L  C K      G QVH  +V  G D   F+ + L+  Y + G + D RR+FD+MS
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 201 ERNVVSWTSLI-CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           ERNV SWT+++   C   D  +E + LF+ MV EG++P+      V  AC++L+N  +G 
Sbjct: 152 ERNVFSWTAIMEMYCGLGDY-EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            V  Y+  +G + N+ +  +++DM++KCG +D A++ F E + +++ + N ++S Y   G
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD------------------------ 355
             ++AL  + +M L G +PD+VT  + +S  AQ G                         
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 356 --LLCGRMCHGY------VLRNG-LEGWDSICNTMIDMYMKCGKQEM---------ACRI 397
             L+ G   +GY      V R   LEG      T+      C    +          C  
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
            + + +  +V  NSL+    K   VE AR  F  +   D +SWN ML G       EEA+
Sbjct: 391 VEELDSDLLVG-NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAI 449

Query: 458 ELFRVMLSERIKVDRV-----------------------------------TMVGVASAC 482
           EL   M  + I+ D +                                   T+ G  +AC
Sbjct: 450 ELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAAC 509

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           G +  L L K I+ Y+ +N I     + +AL+ M++ C   + A  VF  +  RDV  W 
Sbjct: 510 GQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH-------- 594
           + I A A  G    A++L  EM    ++ +++  V  L ACS    + QG          
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629

Query: 595 -------LFRSMTDIHG-------------VSPQ--IVHYGCMVDLLGRAGLLGEALDL- 631
                  +  S+ D++G             + PQ  +V +  M+ + G  G   +A++L 
Sbjct: 630 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689

Query: 632 --IKSMPVEPNDVIWGSLLAAC 651
              ++M ++PN + + +LL+AC
Sbjct: 690 QQFRTMGLKPNHITFTNLLSAC 711



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 170/398 (42%), Gaps = 47/398 (11%)

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           R G+   A  +L  M L  P        S +    +L +L  G   H  ++ NG++  + 
Sbjct: 66  RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + + ++++Y + G  E A R+FD MS + V SW +++      GD               
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGD--------------- 170

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                           +EE ++LF +M++E ++ D      V  AC  L    + K +Y 
Sbjct: 171 ----------------YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           Y+   G   +  +  +++DMF +CG    A + F  +E +DV  W   +     +G  ++
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A++  ++M   G+KPD + +  +++  +  G   +    F  M  +    P +V +  ++
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334

Query: 617 DLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQK----HQNVDIAAYAAERITE 669
               + G   EAL + + M +E   PN +   S ++AC          +I  Y   ++ E
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI-KVEE 393

Query: 670 LDPEKSGVHVLLSNI---YASAGKWTNVARVRLQMKEQ 704
           LD +     +L+ N    Y +  +   VAR +  M +Q
Sbjct: 394 LDSD-----LLVGNSLVDYYAKCRSVEVARRKFGMIKQ 426


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/586 (45%), Positives = 369/586 (62%), Gaps = 9/586 (1%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           R C ++D     +  +   AL D     G++  A+ +F +  +     CN+I+  Y    
Sbjct: 3   RTCLFVDPFS-ASKIVAFCALHD----SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKN 57

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           L R+A+     M+L G  PDR T  S   +    G L  G+  H +  + G      I N
Sbjct: 58  LPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQN 114

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP-GRDHI 438
           T+++MY  CG    A ++FD M NK+VVSW ++I    +      A ++F  M    +  
Sbjct: 115 TLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLF 174

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
            WN M+ G  +++ +EEA+ LF  M    +K D+VTM  +  AC +LGAL+L KW++ YI
Sbjct: 175 CWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYI 234

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
           EK  I  D+ L TALVDM+A+CG  + AM+VF+ M ++DV  WTA I  +AM G G +A+
Sbjct: 235 EKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKAL 294

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           ELF+EM    +KPD+I FVGVL ACSH GLVN+G   F SM + +G+ P I HYGCMVD+
Sbjct: 295 ELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDM 354

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAG + EA DLI++MP+ P+  +   LL+AC+ H N+ +A  AA+++ ELDP+  G +
Sbjct: 355 LGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTY 414

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLLSNIY+S   W    ++R  M E+ I+K PG S+IEV G VHEF  GD SHP+ + I 
Sbjct: 415 VLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIY 474

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
             L +M  RL+ AGYVPD + VL D+DE+EK+  LS HSEKLA+AFGL+ST+   PIRVV
Sbjct: 475 ETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVV 534

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCHS  K +S+VY+REIIVRD NRFH F +GSCSC DFW
Sbjct: 535 KNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 185/373 (49%), Gaps = 50/373 (13%)

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
           +L+  L   P   SK+V  CA +    SL YA+  F+        + T F  NS+IRGY+
Sbjct: 1   MLRTCLFVDPFSASKIVAFCA-LHDSGSLPYARLVFNQI-----PNPTTFTCNSIIRGYT 54

Query: 115 CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF 174
              L  +AI  Y  +   G+ PD+FTFP +  +C       EG Q+H    K+GF  D +
Sbjct: 55  NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAY 111

Query: 175 VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF------ 228
           ++N L+N Y  CG +V  R+VFD+M  ++VVSW ++I A A+ DLP EA+ LF       
Sbjct: 112 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 171

Query: 229 --------------------------EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
                                     EM   G+K + VTM  ++ AC  L  LELG  + 
Sbjct: 172 NLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLH 231

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
            YI++  ++ +  +  ALVDMY KCG++++A ++F E  +++++    ++      G   
Sbjct: 232 VYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGL 291

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSI 377
           +AL +  EM +   +PD +T +  ++A +  G +  G      M + Y ++  +E +   
Sbjct: 292 KALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHY--- 348

Query: 378 CNTMIDMYMKCGK 390
              M+DM  + G+
Sbjct: 349 -GCMVDMLGRAGR 360



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 35/292 (11%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV--------CTCAQMGTFESLT- 84
           PS+   K+C  L E KQ HCH  K G     +YI   +        C  +    F+ +  
Sbjct: 82  PSL--FKSCGVLCEGKQLHCHSTKLGFASD-AYIQNTLMNMYSNCGCLVSARKVFDKMVN 138

Query: 85  ------------YAQKAFDY----YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVE 128
                       YAQ    +      +  E ++ LF +N +I G+       EA+SL+ E
Sbjct: 139 KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNE 198

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           +   G+  DK T   +L ACT   A   G  +H  I K   + DV +   L++ Y +CG 
Sbjct: 199 MQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGS 258

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           I    RVF EM E++V++WT+LI   A      +A+ LF EM    +KP+++T V V++A
Sbjct: 259 IESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 318

Query: 249 CAKLQNLELGDRVCAYIDEL----GMKANALMVNALVDMYMKCGAVDTAKQL 296
           C+   +  L +   AY + +    G++ +      +VDM  + G +  A+ L
Sbjct: 319 CS---HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDL 367


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 301/865 (34%), Positives = 456/865 (52%), Gaps = 84/865 (9%)

Query: 26  AKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
           + + P+ +P    +  CKT++++K  H  +L  G       I  +  T   + T+ S+  
Sbjct: 24  STSAPEITPPF--IHKCKTISQVKLIHQKLLSFG-------ILTLNLTSHLISTYISVGC 74

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
              A     +   + A ++ +NSLIR Y   G   + + L+  +      PD +TFPFV 
Sbjct: 75  LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVF 134

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC + S+   G   H   +  GF  +VFV N L+  Y  C  + D R+VFDEMS  +VV
Sbjct: 135 KACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV 194

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           SW S+I + A+   PK A+ +F  M  E G +P+++T+V V+  CA L    LG ++  +
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY--------- 315
                M  N  + N LVDMY KCG +D A  +F     +++V  N +++ Y         
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314

Query: 316 VRL--------------------------GLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           VRL                          GL  EAL +  +ML  G +P+ VT++S +S 
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374

Query: 350 SAQLGDLLCGRMCHGYVLR-------NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            A +G L+ G+  H Y ++       NG    + + N +IDMY KC K + A  +FD +S
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K                              RD ++W  M+GG +Q     +A+EL   
Sbjct: 435 PKE-----------------------------RDVVTWTVMIGGYSQHGDANKALELLSE 465

Query: 463 MLSE--RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFAR 519
           M  E  + + +  T+     AC  L AL + K I+AY  +N  +   + ++  L+DM+A+
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG    A  VF  M  ++   WT+ +    M G GE+A+ +F+EM R G K D +  + V
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L ACSH G+++QG   F  M  + GVSP   HY C+VDLLGRAG L  AL LI+ MP+EP
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 645

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
             V+W + L+ C+ H  V++  YAAE+ITEL     G + LLSN+YA+AG+W +V R+R 
Sbjct: 646 PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRS 705

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            M+ +G++K PG S +E       F  GD++HP    I  +L +   R++D GYVP+   
Sbjct: 706 LMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGF 765

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
            L DVD++EK  LL  HSEKLA+A+G+++T +   IR+ KNLR+C DCH+    +S++ D
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
            +II+RD++RFH F+ GSCSC  +W
Sbjct: 826 HDIILRDSSRFHHFKNGSCSCKGYW 850


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 279/752 (37%), Positives = 436/752 (57%), Gaps = 38/752 (5%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAF 154
           D      ++ +NS+I  Y   G   EAI  + +L     I PD +TFP VL AC      
Sbjct: 175 DQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTL 231

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
            +G ++H    K+GF  +VFV   LI+ Y   G     R +FD+M  R++ SW ++I   
Sbjct: 232 VDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +     +A+ +  EM  EGIK N VT+V ++  C +L ++     +  Y+ + G++ + 
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + NAL++MY K G ++ A++ F +    ++V  N+I++ Y +      A     +M L+
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS-ICNTMIDMYMKCGKQEM 393
           G +PD +T++S  S  AQ  D    R  HG+++R G    D  I N ++DMY K G    
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGL--- 468

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                                       ++SA +VF  +  +D ISWNT++ G  Q  + 
Sbjct: 469 ----------------------------LDSAHKVFEIILVKDVISWNTLITGYAQNGLA 500

Query: 454 EEAMELFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            EA+E++++M   + I  ++ T V +  A  ++GAL     I+  + K  +H D+ +AT 
Sbjct: 501 SEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATC 560

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+D++ +CG    AM +F ++ +     W A I    + G+ E+ ++LF EML +G+KPD
Sbjct: 561 LIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPD 620

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + FV +L+ACSH G V +G   FR M + +G+ P + HYGCMVDLLGRAG L  A   I
Sbjct: 621 HVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYGFI 679

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           K MP++P+  IWG+LL AC+ H N+++  +A++R+ E+D +  G +VLLSNIYA+ GKW 
Sbjct: 680 KDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWE 739

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            V +VR   +E+G++K PG S+IEVN KV  F +G++SHP+   I   LR +  +++  G
Sbjct: 740 GVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 799

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y+PD + VL DV+E EK+++L+ HSE+LA+AFG+IST    PIR+ KNLR+C DCH+  K
Sbjct: 800 YIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATK 859

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S++  REI+VRD+NRFH F+ G CSC D+W
Sbjct: 860 FISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 282/589 (47%), Gaps = 59/589 (10%)

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G   ++  F F+ ++ TK+  F + +  H  +V  G  + +F+   L+N Y   GD+ 
Sbjct: 112 GLGNQNEEIDFNFLFDSSTKT-PFAKCL--HALLVVAGKVQSIFISTRLVNLYANLGDVS 168

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE--MVEEGIKPNSVTMVCVISA 248
             R  FD++ +++V +W S+I A        EA+  F++  +V E I+P+  T   V+ A
Sbjct: 169 LSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSE-IRPDFYTFPPVLKA 227

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C  L +   G R+  +  +LG + N  +  +L+ MY + G    A+ LF +   R++   
Sbjct: 228 CGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSW 284

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N ++S  ++ G A +AL +LDEM L G + + VT++S +    QLGD+    + H YV++
Sbjct: 285 NAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIK 344

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           +GLE    + N +I+MY K G  E A + F  M    VVSWNS+IA   +N D  +A   
Sbjct: 345 HGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGF 404

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           F +M                Q N F+                D +T+V +AS        
Sbjct: 405 FVKM----------------QLNGFQP---------------DLLTLVSLASIVAQSRDC 433

Query: 489 DLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
             ++ ++ +I + G +  D+ +  A+VDM+A+ G    A +VF  +  +DV +W   I  
Sbjct: 434 KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITG 493

Query: 548 MAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM--TDIHG 604
            A  G   +A+E++  M   + I P+   +V +L A +H G + QG  +   +  T++H 
Sbjct: 494 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLH- 552

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA--ACQKHQNVDIAAY 662
               +    C++D+ G+ G L +A+ L   +P E + V W ++++      H    +  +
Sbjct: 553 --LDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEKTLKLF 609

Query: 663 AAERITELDPEKSGVHVLLS----NIYASAGKWTNVARVRLQMKEQGIR 707
                  + P+      LLS    + +   GKW      RL M+E GI+
Sbjct: 610 GEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC----FRL-MQEYGIK 653



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 247/520 (47%), Gaps = 42/520 (8%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           LK C TL + ++ HC   K G        + ++   ++ G F  +  A+  F     D+ 
Sbjct: 225 LKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFG-FTGI--ARSLF-----DDM 276

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
               +  +N++I G    G   +A+ +  E+   GI  +  T   +L  C +       +
Sbjct: 277 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM 336

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +H  ++K G + D+FV N LIN Y + G++ D R+ F +M   +VVSW S+I A  + D
Sbjct: 337 LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQND 396

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMV 277
            P  A   F +M   G +P+ +T+V + S  A+ ++ +    V  +I   G +  + ++ 
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LLHGP 336
           NA+VDMY K G +D+A ++F     ++++  NT+++ Y + GLA EA+ +   M      
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEI 516

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            P++ T +S + A A +G L  G   HG V++  L     +   +ID+Y KCG+   A  
Sbjct: 517 IPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMS 576

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F  +  ++ V+WN++I+    +G  E   ++F EM                        
Sbjct: 577 LFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEM------------------------ 612

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
                  L E +K D VT V + SAC + G ++  KW +  +++ GI   ++    +VD+
Sbjct: 613 -------LDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDL 665

Query: 517 FARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
             R G  + A    + M  + D S W A +GA  + GN E
Sbjct: 666 LGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIE 705


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 270/706 (38%), Positives = 409/706 (57%), Gaps = 35/706 (4%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  +L  C +  +  +G +VH AI+K G   + ++EN L++ Y +CG + D RRVFD + 
Sbjct: 99  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +RN+VSWT++I A    +   EA   +  M   G KP+ VT V +++A    + L++G +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V   I + G++    +  +LV MY KCG +  A+ +F +  ++N+V    +++ Y + G 
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL--EGWDSIC 378
              AL +L++M      P+++T  S +        L  G+  H Y++++G   E W  + 
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIW--VV 336

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N +I MY KCG                                ++ AR++F ++P RD +
Sbjct: 337 NALITMYCKCG-------------------------------GLKEARKLFGDLPHRDVV 365

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +W  M+ G  Q    +EA++LFR M  + IK D++T     ++C     L   K I+  +
Sbjct: 366 TWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL 425

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
              G   D+ L +ALV M+A+CG    A  VF +M +R+V AWTA I   A  G   +A+
Sbjct: 426 VHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREAL 485

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           E F +M +QGIKPD + F  VL+AC+H GLV +G   FRSM   +G+ P + HY C VDL
Sbjct: 486 EYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDL 545

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAG L EA ++I +MP +P   +WG+LL+AC+ H +V+    AAE + +LDP+  G +
Sbjct: 546 LGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAY 605

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           V LSNIYA+AG++ +  +VR  M+++ + K PG S IEV+GKVH F   D+SHPE   I 
Sbjct: 606 VALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIY 665

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
           + L ++  ++++ GYVPD   VL DVDE++K   L  HSE+LA+ +GL+ T    PIR+V
Sbjct: 666 AELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIV 725

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH+ +K +SKV  REII RD +RFH F  G CSC DFW
Sbjct: 726 KNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 171/611 (27%), Positives = 284/611 (46%), Gaps = 70/611 (11%)

Query: 37  GSLKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           G L+ C  L  L+Q    H  ILK G+       + ++   A+ G   SLT A++ FD  
Sbjct: 101 GLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCG---SLTDARRVFDG- 156

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I+D      +  + ++I  +      +EA   Y  +   G  PDK TF  +LNA T    
Sbjct: 157 IRDR----NIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPEL 212

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G +VH  I K G + +  V   L+  Y +CGDI   + +FD++ E+NVV+WT LI  
Sbjct: 213 LQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAG 272

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A++     A+ L  +M +  + PN +T   ++  C     LE G +V  YI + G    
Sbjct: 273 YAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE 332

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +VNAL+ MY KCG +  A++LFG+   R++V    +++ Y +LG   EA+ +   M  
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ 392

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G +PD++T  SA+++ +    L  G+  H  ++  G      + + ++ MY KCG  + 
Sbjct: 393 QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDD 452

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQ 449
           A  +F+ MS + VV+W ++I G  ++G    A E F +M  +    D +++ ++L   T 
Sbjct: 453 ARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTH 512

Query: 450 ENMFEEAMELFRVM-LSERIK--VDRVT-MVGVASACGYL-------------------G 486
             + EE  + FR M L   IK  V+  +  V +    G+L                   G
Sbjct: 513 VGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWG 572

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLA---------TALVDMFARCGDPQRAMQVFRRMEKRD 537
           AL  A  I++ +E+     +  L           AL +++A  G  + A +V + MEKRD
Sbjct: 573 ALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRD 632

Query: 538 V-----SAWTAAIGAMAM----EGNGEQAVELFNEMLR-------QGIKPDSIVFV---- 577
           V      +W    G + +    + +  +A E++ E+ +       QG  PD+   +    
Sbjct: 633 VVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVD 692

Query: 578 ---GVLTACSH 585
               V T CSH
Sbjct: 693 EEQKVQTLCSH 703


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/807 (34%), Positives = 437/807 (54%), Gaps = 43/807 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +    TL++L Q H  I+  GL +    ++K+    + +   +     Q +  +    N 
Sbjct: 17  INRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAID-----QASLLFSTIPN- 70

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEG 157
               LF+YN LIR +S       A+SLY  L     L PD FT+ FV++  +        
Sbjct: 71  --PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLL 128

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
                  +  GF  D+FV + ++  Y +   +   R+VFD M ER+ V W +++    + 
Sbjct: 129 HAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKN 185

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
               EA+ +F +MV+ GI  +S T+  V+   A+LQ+L LG  +     ++G  ++A ++
Sbjct: 186 SCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVI 245

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
             L  +Y KCG ++TA+ LFG+    +LV  N ++S Y        ++ +  E+L+ G +
Sbjct: 246 TGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEK 305

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            +  +++  +      G L   R  HG+                      C K  +    
Sbjct: 306 VNSSSIVGLIPVFFPFGHLHLTRCIHGF----------------------CTKSGVVSNS 343

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
               +  TV S         +  ++ESAR +F E   +   SWN M+ G  Q  + E+A+
Sbjct: 344 SVSTALTTVYS---------RLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAI 394

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF+ M    ++ + VT+  + SAC  LGAL L KW++  I +     ++ ++TAL+DM+
Sbjct: 395 SLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMY 454

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG    A ++F  M +++   W A I    + G G +A+ LFNEML   + P  + F+
Sbjct: 455 AKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFL 514

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL ACSH GLV +G  +FRSM   HG  P   HY CMVDLLGRAG L +ALD I+ MPV
Sbjct: 515 SVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPV 574

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           EP   +WG+LL AC  H++ ++A  A++++ ELDP+  G +VLLSNIY++   +   A V
Sbjct: 575 EPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASV 634

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  +K + + K PG + IEV   +H FTSGD+SHP+   I +ML ++  ++R+AG+  + 
Sbjct: 635 RGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTET 694

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
              L DV+E+EK+ ++  HSEKLA+AFGLI++     IR++KNLR+C DCH+  K +SK+
Sbjct: 695 GTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKI 754

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +R I+VRD NRFH F+ G CSC D+W
Sbjct: 755 TERVIVVRDANRFHHFKDGICSCGDYW 781


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 286/833 (34%), Positives = 472/833 (56%), Gaps = 50/833 (6%)

Query: 17  VTTLTNQHKAKTTP--KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           + +++  +K+ TT   KD+       +C  +N  K+ H  +L  G        +K++   
Sbjct: 5   LKSVSKFYKSATTSLHKDADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLY 64

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS----LYVELA 130
              G    ++ ++  FDY  K N     +F +NS+I  Y   G   EA++    L+    
Sbjct: 65  VTHG---DISLSRSTFDYIHKKN-----IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCG 116

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G  + PD +TFP +L AC    +  +G +VH  + KMGF+ DVFV   L++ Y   G + 
Sbjct: 117 GGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLD 173

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
              +VF +M  ++V SW ++I    +      A+ +   M  EG+K +++T+  ++  CA
Sbjct: 174 VAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCA 233

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
           +  ++  G  +  ++ + G+ ++  + NAL++MY K G +  A+ +F + + R+LV  N+
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           I++ Y +      AL     M L G RPD +T++S  S  +QL D    R   G+V+R  
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRRE 353

Query: 371 LEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
               D  I N +++MY K G   M C                             A  VF
Sbjct: 354 WLDKDVVIGNALVNMYAKLGY--MNC-----------------------------AHTVF 382

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-DRVTMVGVASACGYLGAL 488
            ++P +D ISWNT++ G TQ  +  EA++ + +M   R  + ++ T V +  A  ++GAL
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
                I+A + KN ++ D+ +AT L+D++ +CG  + AM +F  + +     W A I ++
Sbjct: 443 QQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASL 502

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
            + G GE+A++LF +ML + +K D I FV +L+ACSH GLV++G   F  M   +G+ P 
Sbjct: 503 GIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPS 562

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
           + HYGCMVDLLGRAG L +A +L+++MP++P+  IWG+LL+AC+ + N ++   A++R+ 
Sbjct: 563 LKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           E+D E  G +VLLSNIYA+  KW  V +VR   +++G+RK PG SS+ V  K   F +G+
Sbjct: 623 EVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGN 682

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           ++HP+   I   L+ ++ +++  GYVPD + V  D++E EK+ +L+ HSE+LA+AFG+IS
Sbjct: 683 QTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIIS 742

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           T    PIR+ KNLR+C DCH+  K +S++ +REI+VRD+NRFH F+ G CSC+
Sbjct: 743 TPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/683 (38%), Positives = 403/683 (59%), Gaps = 64/683 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF+ + E N++ W ++    A    P  A+ L+  M+  G+ PNS T   ++ +CAKL+ 
Sbjct: 19  VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKC--------------------------- 287
            + G ++  ++ +LG + +  +  +L+ MY++                            
Sbjct: 79  SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138

Query: 288 ----GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
               G +++A+ +F E   +++V  N ++S YV  G  +EAL +  EM+    RPD  TM
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           ++ +SASA+ G +  GR  H ++  +G      I N +ID Y KCG              
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCG-------------- 244

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                            ++E+A  +F  +  +D ISWN ++GG T  N+++EA+ LF+ M
Sbjct: 245 -----------------EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEM 287

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCG 521
           L      + VTM+ +  AC +LGA+D+ +WI+ YI+K   G+     L T+L+DM+++CG
Sbjct: 288 LRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCG 347

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           D + A QVF  M  + + AW A I   AM G    A ++F+ M +  IKPD I FVG+L+
Sbjct: 348 DIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH G+++ G H+FRSMT  + ++P++ HYGCM+DLLG +GL  EA ++I +M +EP+ 
Sbjct: 408 ACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDG 467

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           VIW SLL AC+ H NV++    A+ + +++P   G +VLLSNIYA+AG+W  VAR+R  +
Sbjct: 468 VIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLL 527

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            ++G++K+PG SSIE++  VHEF  GD+ HP    I  ML EM   L++AG+VPD + VL
Sbjct: 528 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVL 587

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +++E+ K+  L HHSEKLA+AFGLIST     + +VKNLR+C +CH   KL+SK+Y RE
Sbjct: 588 QEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKRE 647

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           II RD  RFH FR G CSC+D+W
Sbjct: 648 IIARDRTRFHHFRDGVCSCNDYW 670



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 167/535 (31%), Positives = 273/535 (51%), Gaps = 73/535 (13%)

Query: 74  CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
           C     FE L YA   F+   + N     L ++N++ RG++     V A+ LYV +   G
Sbjct: 4   CILSPHFEGLPYAISVFETIQEPN-----LLIWNTMFRGHALSPDPVSALKLYVCMISLG 58

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +LP+ +TFPF+L +C K  A  EG+Q+HG ++K+G++ D++V   LI+ Y +   + D  
Sbjct: 59  LLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAH 118

Query: 194 RVFDEMSERNVVSWTSLICACARR-----------DLP--------------------KE 222
           +VFD  S R+VVS+T+L+   A R           ++P                    KE
Sbjct: 119 KVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKE 178

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+ LF EM++  ++P+  TMV VISA A+  ++ELG +V ++I + G  +N  +VNAL+D
Sbjct: 179 ALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALID 238

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            Y KCG ++TA  LF     ++++  N ++  Y  L L +EAL +  EML  G  P+ VT
Sbjct: 239 FYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVT 298

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           MLS + A A LG +  GR  H Y+ +   G+    S+  ++IDMY KCG  E A ++F+ 
Sbjct: 299 MLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNS 358

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M +K++ +WN++I G   +G   +A ++FS M   +                        
Sbjct: 359 MLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNE------------------------ 394

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
                  IK D +T VG+ SAC + G LDL + I+  +  N  I   ++    ++D+   
Sbjct: 395 -------IKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGH 447

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            G  + A ++   M  + D   W + + A  M GN E   +    + +  I+P++
Sbjct: 448 SGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFK--IEPNN 500



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 206/411 (50%), Gaps = 35/411 (8%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F   ++ NL++ NT+   +        AL +   M+  G  P+  T    + + A+
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           L     G   HG+VL+ G E    +  ++I MY++  + E A ++FD  S++ VVS+ +L
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           + G    G +ESAR +F E+P +D +SWN M+ G  +   ++EA+ELF+ M+   ++ D 
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            TMV V SA    G+++L + ++++I  +G   ++++  AL+D +++CG+ + A  +F  
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +  +DV +W   IG        ++A+ LF EMLR G  P+ +  + +L AC+H G ++ G
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315

Query: 593 -W-HLF---------------RSMTDI----------HGVSPQIVH-----YGCMVDLLG 620
            W H++                S+ D+          H V   ++H     +  M+    
Sbjct: 316 RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA 375

Query: 621 RAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
             G    A D+   M    ++P+D+ +  LL+AC     +D+  +    +T
Sbjct: 376 MHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMT 426


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 274/712 (38%), Positives = 409/712 (57%), Gaps = 37/712 (5%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCLINFYGECGDIVDGRRV 195
           D FTFP +L A   +   G   Q+H   +++G  R D F    L++ Y   G + D  R 
Sbjct: 70  DAFTFPPLLRA---AQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FDEM  R+V +W +++    R     EAV LF  MV EG+  ++VT+  V+  C  L + 
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
            L   +  Y  + G+     + NA++D+Y K G ++  +++F     R+LV  N+I+S +
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            + G    A+ +   M   G  PD +T+LS  SA AQ GD+  GR  H Y++R G +  D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 376 SIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
            I  N ++DMY K  K E A R+FD M  +  VSWN+LI G ++NG    A  V+  M  
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHM-- 364

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           + H                            E +K  + T V V  A  +LGAL     +
Sbjct: 365 QKH----------------------------EGLKPIQGTFVSVLPAYSHLGALQQGTRM 396

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +A   K G++ D+ + T ++D++A+CG    AM +F +  +R    W A I  + + G+G
Sbjct: 397 HALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHG 456

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
            +A+ LF++M ++GI PD + FV +L ACSH GLV+QG + F  M   +G+ P   HY C
Sbjct: 457 AKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYAC 516

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           MVD+ GRAG L +A D I++MP++P+  IWG+LL AC+ H NV++   A++ + ELDP+ 
Sbjct: 517 MVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKN 576

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES--HP 732
            G +VL+SN+YA  GKW  V  VR  ++ Q ++K PG SSIEV   V+ F SG++   HP
Sbjct: 577 VGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHP 636

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           +   I   L ++  ++R  GYVPD + VL DV+E EK+ +L++HSE+LA+AFG+I+T   
Sbjct: 637 QHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPR 696

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            P+ + KNLR+C DCH+  K +SK+ +REIIVRD+NRFH F+ G CSC DFW
Sbjct: 697 TPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/573 (43%), Positives = 365/573 (63%)

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           A + ++   VD       +D A ++F + ++ NL + N ++  +       +A     + 
Sbjct: 51  AASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQS 110

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
              G  PD +T    V +  +L  +  G   HG+++++G E    + N+++ MY   G  
Sbjct: 111 QRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDT 170

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           E A  IF  M    VVSW S+I G  K GDVESAR++F +MP ++ ++W+TM+ G  Q N
Sbjct: 171 EAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNN 230

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
            F++A+ELF+V+ S+ ++ +   MV V S+C +LGAL+L +  + Y+ KNG+  ++ L T
Sbjct: 231 HFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGT 290

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           ALVDM+ARCG   +A+ VF  + +RD  +WTA I  +AM G  E++++ F  M+  G+ P
Sbjct: 291 ALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTP 350

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
             I F  VL+ACSHGGLV +G+ +F SM   H V P++ HYGCMVDLLGRAG L EA   
Sbjct: 351 RDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERF 410

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           +  MPV+PN  +WG+LL AC+ H+N +I     + + +L P+ SG +VLLSNIYA+A +W
Sbjct: 411 VLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEW 470

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             V  +R  MK +G++K PG S IE++G+VH+FT GD SHPEM+ I  M  E+  R+R A
Sbjct: 471 EKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAA 530

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           GY  +  + L D+DE+EK+  L  HSEKLA+AFG++ +    PIR+VKNLR+C DCH+  
Sbjct: 531 GYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTAT 590

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KL+SKV+ RE+IVRD NRFH FRQG CSC D+W
Sbjct: 591 KLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 213/443 (48%), Gaps = 63/443 (14%)

Query: 27  KTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT-Y 85
           KT    +P + SL+ C  L  LK  H ++++  +       S+++  C    +  SL  Y
Sbjct: 12  KTLRLKNPKLFSLETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDY 71

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A + F      N     LF++N++IRG+S      +A   YV+    G+LPD  TFPF++
Sbjct: 72  ASRIFSQIQNPN-----LFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLV 126

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG--------------------- 184
            +CTK      G Q HG I+K GF++DV+V+N L++ Y                      
Sbjct: 127 KSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVV 186

Query: 185 ----------ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
                     +CGD+   R++FD+M E+N+V+W+++I   A+ +   +AV LF  +  +G
Sbjct: 187 SWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQG 246

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           ++ N   MV VIS+CA L  LELG+R   Y+ + GM  N ++  ALVDMY +CG++D A 
Sbjct: 247 VRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAV 306

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            +F +  +R+ +    +++     G +  +L     M+  G  P  +T  + +SA +   
Sbjct: 307 WVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACS--- 363

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNT------------MIDMYMKCGKQEMACRIFDHMS 402
                   HG ++  G + ++S+               M+D+  + GK E A R    M 
Sbjct: 364 --------HGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMP 415

Query: 403 NK-TVVSWNSLIAG--LIKNGDV 422
            K     W +L+    + KN ++
Sbjct: 416 VKPNAPVWGALLGACRIHKNAEI 438



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 41/206 (19%)

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR-------AMQVFRRMEKRDVSAWTAA 544
           K I+AY+ +  I CD+  A+ L+   A C DP         A ++F +++  ++  + A 
Sbjct: 34  KIIHAYMIRTHIICDVFAASRLI---AFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAM 90

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGW 593
           I   +   N +QA   + +  RQG+ PD++ F  ++ +C+           HG ++  G+
Sbjct: 91  IRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGF 150

Query: 594 -----------HLFRSMTDIHGVS--------PQIVHYGCMVDLLGRAGLLGEALDLIKS 634
                      H++ +  D    +          +V +  M+    + G +  A  L   
Sbjct: 151 EKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQ 210

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIA 660
           MP E N V W ++++   ++ + D A
Sbjct: 211 MP-EKNLVTWSTMISGYAQNNHFDKA 235


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/753 (37%), Positives = 430/753 (57%), Gaps = 43/753 (5%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLNACTKSSAF 154
           D+  +  ++ +N +I GY   G   E I  + + +   G+ PD  TFP VL AC      
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 166

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
            +G ++H   +K GF  DV+V   LI+ Y     + + R +FDEM  R++ SW ++I   
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226

Query: 215 ARRDLPKEAVYLFFEMVEEGIKP-NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            +    KEA+ L       G++  +SVT+V ++SAC +  +   G  + +Y  + G+++ 
Sbjct: 227 CQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             + N L+D+Y + G +   +++F     R+L+  N+I+  Y        A+++  EM L
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL 341

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQE 392
              +PD +T++S  S  +QLGD+   R   G+ LR G    D +I N ++ MY K G   
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL-- 399

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
                                        V+SAR VF+ +P  D ISWNT++ G  Q   
Sbjct: 400 -----------------------------VDSARAVFNWLPNTDVISWNTIISGYAQNGF 430

Query: 453 FEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
             EA+E++ +M  E  I  ++ T V V  AC   GAL     ++  + KNG++ D+ + T
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           +L DM+ +CG  + A+ +F ++ + +   W   I      G+GE+AV LF EML +G+KP
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I FV +L+ACSH GLV++G   F  M   +G++P + HYGCMVD+ GRAG L  AL  
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           IKSM ++P+  IWG+LL+AC+ H NVD+   A+E + E++PE  G HVLLSN+YASAGKW
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             V  +R     +G+RK PG SS+EV+ KV  F +G+++HP    +   L  +  +L+  
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           GYVPD   VL DV++ EK+++L  HSE+LA+AF LI+T     IR+ KNLR+C DCHS  
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVT 790

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K +SK+ +REIIVRD+NRFH F+ G CSC D+W
Sbjct: 791 KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 258/529 (48%), Gaps = 59/529 (11%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           PS+  LK C+T+ +  + HC  LK G        + ++   ++   ++++  A+  FD  
Sbjct: 157 PSV--LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR---YKAVGNARILFDEM 211

Query: 94  -IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
            ++D  +      +N++I GY   G   EA++L   L       D  T   +L+ACT++ 
Sbjct: 212 PVRDMGS------WNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG 261

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
            F  GV +H   +K G + ++FV N LI+ Y E G + D ++VFD M  R+++SW S+I 
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
           A    + P  A+ LF EM    I+P+ +T++ + S  ++L ++    R C  +    ++ 
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI----RACRSVQGFTLRK 377

Query: 273 NALMV-----NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
              +      NA+V MY K G VD+A+ +F    + +++  NTI+S Y + G A EA+ +
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 437

Query: 328 LDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
            + M   G    ++ T +S + A +Q G L  G   HG +L+NGL     +  ++ DMY 
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 497

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG+ E A  +F  +     V WN+LIA    +G  E A  +F EM              
Sbjct: 498 KCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM-------------- 543

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHC 505
                            L E +K D +T V + SAC + G +D  +W +  ++ + GI  
Sbjct: 544 -----------------LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            ++    +VDM+ R G  + A++  + M  + D S W A + A  + GN
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 228/494 (46%), Gaps = 45/494 (9%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  +V     ++V +   L+N Y   G++   R  FD +  R+V +W  +I    R   
Sbjct: 73  LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132

Query: 220 PKEAVYLF-FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             E +  F   M+  G+ P+  T   V+ AC  + +   G+++     + G   +  +  
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L+ +Y +  AV  A+ LF E   R++   N ++S Y + G A+EAL      L +G R 
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRA 244

Query: 339 -DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            D VT++S +SA  + GD   G   H Y +++GLE    + N +ID+Y + G+     ++
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD M  + ++SWNS+I     N           E P R                    A+
Sbjct: 305 FDRMYVRDLISWNSIIKAYELN-----------EQPLR--------------------AI 333

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDM 516
            LF+ M   RI+ D +T++ +AS    LG +   + +  +  + G    D+ +  A+V M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIV 575
           +A+ G    A  VF  +   DV +W   I   A  G   +A+E++N M  +G I  +   
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           +V VL ACS  G + QG  L   +   +G+   +     + D+ G+ G L +AL L   +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512

Query: 636 PVEPNDVIWGSLLA 649
           P   N V W +L+A
Sbjct: 513 P-RVNSVPWNTLIA 525



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 184/435 (42%), Gaps = 75/435 (17%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD-EM 331
           N  +   LV++Y   G V  A+  F   ++R++   N ++S Y R G + E +      M
Sbjct: 85  NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
           L  G  PD  T  S + A   + D   G   H   L+ G          M D+Y+     
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGF---------MWDVYVAA--- 189

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
                              SLI    +   V +AR +F EMP RD  SWN M+ G  Q  
Sbjct: 190 -------------------SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
             +EA+ L   + +    +D VT+V + SAC   G  +    I++Y  K+G+  ++ ++ 
Sbjct: 231 NAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
            L+D++A  G  +   +VF RM  RD+ +W + I A  +     +A+ LF EM    I+P
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346

Query: 572 DSIVFV---------GVLTACS--HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           D +  +         G + AC    G  + +GW L     DI   +  +V Y        
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL----EDITIGNAVVVMY-------A 395

Query: 621 RAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           + GL+  A  +   +P    DVI W ++++   ++     A+ A E    ++ E      
Sbjct: 396 KLGLVDSARAVFNWLP--NTDVISWNTIISGYAQN---GFASEAIEMYNIMEEE------ 444

Query: 680 LLSNIYASAGKWTNV 694
               I A+ G W +V
Sbjct: 445 --GEIAANQGTWVSV 457


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 296/865 (34%), Positives = 469/865 (54%), Gaps = 83/865 (9%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFES-LTYAQKAFDYY-IKDNETSATLFMYN 107
           Q HCH         P   S VV   A+    +S   +AQ+ FD   ++D      L  +N
Sbjct: 25  QLHCHA-------NPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRD------LKQHN 71

Query: 108 SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
            L+  YS      EA+ L+V L   G+ PD +T   VL+ C  S     G QVH   VK 
Sbjct: 72  QLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKC 131

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
           G    + V N L++ Y + G++ DGRRVFDEM +R+VVSW SL+   +      +   LF
Sbjct: 132 GLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELF 191

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
             M  EG +P+  T+  VI+A A    + +G ++ A + +LG +   L+ N+L+ M  K 
Sbjct: 192 CLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKS 251

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +  A+ +F   ++++ V  N++++ +V  G   EA    + M L G +P   T  S +
Sbjct: 252 GMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVI 311

Query: 348 SASAQLGDLLCGRMCHGYVLRNGL------------------------------EGWDSI 377
            + A L +L   R+ H   L++GL                               G  S+
Sbjct: 312 KSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSV 371

Query: 378 CN--TMIDMYMKCGKQEMACRIF----------DHMSNKTVVS----------------- 408
            +   MI  Y++ G  + A  +F          +H +  T+++                 
Sbjct: 372 VSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKT 431

Query: 409 --------WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
                     +L+   +K G++  A +VF  +  +D I+W+ ML G  Q    EEA ++F
Sbjct: 432 NYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIF 491

Query: 461 RVMLSERIKVDRVTMVGVASAC-GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
             +  E IK +  T   + +AC     +++  K  +AY  K  ++  + ++++LV ++A+
Sbjct: 492 HQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAK 551

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
            G+ + A ++F+R ++RD+ +W + I   A  G  ++A+E+F EM ++ ++ D+I F+GV
Sbjct: 552 RGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGV 611

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           ++AC+H GLV +G + F  M + H ++P + HY CM+DL  RAG+LG+A+D+I  MP  P
Sbjct: 612 ISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPP 671

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
              +W  +LAA + H+N+++   AAE+I  L+P+ S  +VLLSNIYA+AG W     VR 
Sbjct: 672 AATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRK 731

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            M ++ ++K PG S IEV  K + F +GD SHP  ++I S L E+N RLRD GY PD   
Sbjct: 732 LMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNY 791

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           V  D+++++K+ +LSHHSE+LA+AFGLI+T   +P+++VKNLR+C DCHSF KLVS V  
Sbjct: 792 VFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEK 851

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           R I+VRD+NRFH F+ G CSC D+W
Sbjct: 852 RYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 228/467 (48%), Gaps = 34/467 (7%)

Query: 19  TLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCA 75
           T  N   A   P  +     +K+C +L EL   +  HC  LK GL    + ++ ++    
Sbjct: 291 TFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALT 350

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL 135
           +    +       AF  +   +   + +  + ++I GY   G   +A++L+  +   G+ 
Sbjct: 351 KCKEIDD------AFSLFSLMHGVQSVV-SWTAMISGYLQNGDTDQAVNLFSLMRREGVK 403

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P+ FT+  +L    + + F    ++H  ++K  +++   V   L++ + + G+I D  +V
Sbjct: 404 PNHFTYSTILT--VQHAVFIS--EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKV 459

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQN 254
           F+ +  ++V++W++++   A+    +EA  +F ++  EGIKPN  T   +I+AC A   +
Sbjct: 460 FELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTAS 519

Query: 255 LELGDRVCAYIDELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +E G +  AY  +L +  NAL V ++LV +Y K G +++A ++F   K+R+LV  N+++S
Sbjct: 520 VEQGKQFHAYAIKLRLN-NALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMIS 578

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLR 368
            Y + G A++AL + +EM       D +T +  +SA A  G +  G+     M + + + 
Sbjct: 579 GYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHIN 638

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVE---- 423
             +E +    + MID+Y + G    A  I + M      + W  ++A    + ++E    
Sbjct: 639 PTMEHY----SCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKL 694

Query: 424 SAREVFSEMPGRDHISWNTMLGGL-TQENMFEEAMELFRVMLSERIK 469
           +A ++ S  P   H +   +L  +      + E + + ++M   R+K
Sbjct: 695 AAEKIISLEP--QHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVK 739


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 283/744 (38%), Positives = 423/744 (56%), Gaps = 39/744 (5%)

Query: 107 NSLIRGYSCIGLGVEAISL--YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           N+LI  +S   L   A  L  ++    +   PD FTFP ++ A   +++     Q+H   
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93

Query: 165 VKMGFDR-DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +++G  R  VF    L++ Y   G I +  +VFDEMSER+V +W +++    R     EA
Sbjct: 94  LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           V LF  MV EG+  ++VT+  V+  C  L +  L   +  Y  + G+     + NAL+D+
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y K G ++ A+ +F   + R+LV  N+I+S   + G    AL +   M   G  PD +T+
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMS 402
           +S  SA AQ GD    +  H YV+R G +  D I  N ++DMY K    E A R+FD M 
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMP 333

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            +  VSWN+LI G ++NG    A E +  M  + H                         
Sbjct: 334 VQDSVSWNTLITGYMQNGLANEAVERYGHM--QKH------------------------- 366

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
              E +K  + T V V  A  +LGAL     ++A   K G++ D+ + T L+D++A+CG 
Sbjct: 367 ---EGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGK 423

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              AM +F +M +R    W A I  + + G+G +A+ LF+ M ++GIKPD + FV +L A
Sbjct: 424 LAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAA 483

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CSH GLV+QG   F  M   + + P   HY CM D+LGRAG L EA + I++MP++P+  
Sbjct: 484 CSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSA 543

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WG+LL AC+ H NV++   A++ + ELDPE  G +VL+SN+YA  GKW  V  VR  ++
Sbjct: 544 VWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVR 603

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGD--ESHPEMNNISSMLREMNCRLRDAGYVPDLTNV 760
            Q ++K PG SSIEV   V+ F SG+  E HP+   I + LR +  ++R  GYV D + V
Sbjct: 604 RQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFV 663

Query: 761 LLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDR 820
           L DV++ EK+++L++HSE+LA+AFG+I+T    P+ + KNLR+C DCH+  K +S++ +R
Sbjct: 664 LQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITER 723

Query: 821 EIIVRDNNRFHFFRQGSCSCSDFW 844
           EIIVRD+NRFH F+ G CSC DFW
Sbjct: 724 EIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 219/480 (45%), Gaps = 41/480 (8%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L + + +  Y + D  +   +  +N+++ G        EA+ L+  + G G+  D  T  
Sbjct: 114 LRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVS 173

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL  C         + +H   VK G D+++FV N LI+ YG+ G + + + VF  M  R
Sbjct: 174 SVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECR 233

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           ++V+W S+I  C +R     A+ +F  M   G+ P+ +T+V + SA A+  +      + 
Sbjct: 234 DLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLH 293

Query: 263 AYIDELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            Y+   G   + ++  NA+VDMY K   ++ A+++F     ++ V  NT+++ Y++ GLA
Sbjct: 294 CYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLA 353

Query: 322 REALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            EA+     M  H G +  + T +S + A + LG L  G   H   ++ GL     +   
Sbjct: 354 NEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTC 413

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----D 436
           +ID+Y KCGK   A  +F+ M  ++   WN++I+GL  +G    A  +FS M       D
Sbjct: 414 LIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPD 473

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
           H+++ ++L   +   + ++    F VM   ++  D +  +    AC              
Sbjct: 474 HVTFVSLLAACSHAGLVDQGRSFFDVM---QVTYD-IVPIAKHYAC-------------- 515

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
                           + DM  R G    A    + M  K D + W A +GA  + GN E
Sbjct: 516 ----------------MADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVE 559



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 151/328 (46%), Gaps = 4/328 (1%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +NS+I G    G    A+ ++  + G G+ PD  T   + +A  +         +H 
Sbjct: 235 LVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHC 294

Query: 163 AIVKMGFD-RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
            +++ G+D  D+   N +++ Y +  +I   +R+FD M  ++ VSW +LI    +  L  
Sbjct: 295 YVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLAN 354

Query: 222 EAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           EAV  +  M + EG+K    T V V+ A + L  L+ G R+ A   ++G+  +  +   L
Sbjct: 355 EAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCL 414

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           +D+Y KCG +  A  LF +   R+    N I+S     G   EAL +   M   G +PD 
Sbjct: 415 IDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDH 474

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYV-LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           VT +S ++A +  G +  GR     + +   +         M DM  + G+ + A     
Sbjct: 475 VTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQ 534

Query: 400 HMSNKT-VVSWNSLIAGLIKNGDVESAR 426
           +M  K     W +L+     +G+VE  +
Sbjct: 535 NMPIKPDSAVWGALLGACRIHGNVEMGK 562



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 136/288 (47%), Gaps = 33/288 (11%)

Query: 14  TPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCT 73
           +P V TL +   A     D  S  SL            HC+++++G       +  ++  
Sbjct: 267 SPDVLTLVSLASAIAQGGDGRSAKSL------------HCYVMRRGWD-----VDDIIAG 309

Query: 74  CAQMGTFESLT---YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
            A +  +  L+    AQ+ FD     +  S     +N+LI GY   GL  EA+  Y  + 
Sbjct: 310 NAIVDMYAKLSNIEAAQRMFDSMPVQDSVS-----WNTLITGYMQNGLANEAVERYGHMQ 364

Query: 131 GF-GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              G+   + TF  VL A +   A  +G+++H   +K+G + DV+V  CLI+ Y +CG +
Sbjct: 365 KHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKL 424

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            +   +F++M  R+   W ++I          EA+ LF  M +EGIKP+ VT V +++AC
Sbjct: 425 AEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNA----LVDMYMKCGAVDTA 293
           +   +  L D+  ++ D + +  + + +      + DM  + G +D A
Sbjct: 485 S---HAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEA 529


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/840 (33%), Positives = 454/840 (54%), Gaps = 71/840 (8%)

Query: 14  TPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKV 70
           +P  T++  +  +   P    S+  +++C   N     K  H  ++  G       ++K+
Sbjct: 55  SPKPTSIHTKPASDVNPLPYSSL--IQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKI 112

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           +   A+ G  + L YA+K F+   + N T+     +N++I  Y+ +   +EA  ++  + 
Sbjct: 113 LMLYARSGCLDDLCYARKLFEEMPERNLTA-----WNTMILAYARVDDYMEAWGIFDRML 167

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
             G+ PD FTF   L  C    +   G QVH  ++  GF  D FV N LI+ Y +C D  
Sbjct: 168 KIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEE 227

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM--VEEGIKPNSVTMVCVISA 248
              +VFDEM ERN V+W S+I A A+     +A+ LF  M   E+GI+P+  T   +++ 
Sbjct: 228 SCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTL 287

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA  +N   G ++ A++    +  N ++   LV MY +CG ++ AK++F    +RN    
Sbjct: 288 CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW 347

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N+++  Y + G  +EAL +  +M L+G +PD  ++ S +S+   L D   GR  H +++R
Sbjct: 348 NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR 407

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           N +E    +   ++DMY KCG  + A +++D    K                        
Sbjct: 408 NTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKK------------------------ 443

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
                 R+   WN++L G   + + +E+   F  ML   I+ D +TMV + +        
Sbjct: 444 -----DRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL------- 491

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
                             + L TALVDM+++CG   +A  VF  M  +++ +W A I   
Sbjct: 492 ------------------LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGY 533

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
           +  G  ++A+ L+ EM ++G+ P+ + F+ +L+ACSH GLV +G  +F SM + + +  +
Sbjct: 534 SKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAK 593

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
             HY CMVDLLGRAG L +A + ++ MP+EP    WG+LL AC+ H+++D+   AA+R+ 
Sbjct: 594 AEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLF 653

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           ELDP+  G +V++SNIYA+AG+W  V  +R  MK +G++K PG S IE+N ++  F +G 
Sbjct: 654 ELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGS 713

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE----QEKKYLLSHHSEKLAMAF 784
           ++HP+   I + LR +  + +  GY+PD + +L +V +    +E++YLL  HSE+LA++ 
Sbjct: 714 KTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLL-QHSERLALSL 772

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GLIS  K   IRV KNLR+C DCH+  K +SK+  R II RD NRFH F  G CSC D+W
Sbjct: 773 GLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/824 (34%), Positives = 439/824 (53%), Gaps = 42/824 (5%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           HK+   P        L  C  +   K   Q H  I+K GL  +    + +V   ++ G  
Sbjct: 205 HKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWG-- 262

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
            +L  A++ F    + +  S     YNSLI G +  G    A+ L+ ++    + PD  T
Sbjct: 263 -NLIAAEQIFSKMHRRDRIS-----YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVT 316

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
              +L+AC    A  +G Q+H  ++KMG   D+ +E  L++ Y +C DI      F    
Sbjct: 317 VASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTE 376

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
             NVV W  ++ A  +     E+ ++F +M  EG+ PN  T   ++  C  L  L+LG++
Sbjct: 377 TENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQ 436

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           +   + + G + N  + + L+DMY K G +DTA+ +    ++ ++V    +++ Y +  L
Sbjct: 437 IHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDL 496

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             EAL +  EM   G R D +   SA+SA A +  L  G+  H     +G     SI N 
Sbjct: 497 FAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNA 556

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++ +Y +CG+                                + A   F ++  +D+ISW
Sbjct: 557 LVSLYARCGR-------------------------------AQDAYLAFEKIDAKDNISW 585

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N ++ G  Q    EEA+++F  M    ++ +  T     SA      +   K I+A + K
Sbjct: 586 NALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIK 645

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
            G   + + +  L+ ++++CG  + A + F  M +++V +W A I   +  G G +AV L
Sbjct: 646 TGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSL 705

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F EM + G+ P+ + FVGVL+ACSH GLVN+G   FRSM+  HG+ P+  HY C+VDLLG
Sbjct: 706 FEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLG 765

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RA LL  A + I+ MP+EP+ +IW +LL+AC  H+N++I  +AA  + EL+PE S  +VL
Sbjct: 766 RAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVL 825

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSN+YA +GKW    R R  MK++G++K PG S IEV   +H F  GD  HP    I   
Sbjct: 826 LSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEY 885

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           + ++N R  + GYV D  N+L DV++++K      HSEKLA+AFGL+S + TMPIRV+KN
Sbjct: 886 IDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKN 945

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH++ K VSK+ +R I+VRD  RFH F  G CSC D+W
Sbjct: 946 LRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 176/652 (26%), Positives = 319/652 (48%), Gaps = 53/652 (8%)

Query: 28  TTPKDSPSIGSLKNCK----TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
            TP +S     L+ C          +Q H  I+  G G  P   + ++   ++ G  +  
Sbjct: 107 VTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVD-- 164

Query: 84  TYAQKAFD-YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
             A+  F+  ++KD+ +      + ++I G S  G   EAI L+ ++    ++P  + F 
Sbjct: 165 -LAKLVFERLFLKDSVS------WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFS 217

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL+ACTK   F  G Q+HG IVK G   + FV N L+  Y   G+++   ++F +M  R
Sbjct: 218 SVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRR 277

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + +S+ SLI   A+R     A+ LF +M  + +KP+ VT+  ++SACA +     G ++ 
Sbjct: 278 DRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLH 337

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           +Y+ ++GM ++ ++  +L+D+Y+KC  ++TA + F   +  N+VL N ++  Y +LG   
Sbjct: 338 SYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLS 397

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           E+  I  +M + G  P++ T  S +     LG L  G   H  V+++G +    +C+ +I
Sbjct: 398 ESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLI 457

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY K G+ + A  I   +  + VVSW ++IA                            
Sbjct: 458 DMYAKHGELDTARGILQRLREEDVVSWTAMIA---------------------------- 489

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
              G TQ ++F EA++LF+ M ++ I+ D +      SAC  + AL+  + I+A    +G
Sbjct: 490 ---GYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISG 546

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
              D+ +  ALV ++ARCG  Q A   F +++ +D  +W A I   A  G+ E+A+++F+
Sbjct: 547 YSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFS 606

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           +M + G++ +   F   ++A ++   + QG  +   M    G   +      ++ L  + 
Sbjct: 607 QMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKC 665

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           G + +A      MP E N V W +++    +H       Y +E ++  +  K
Sbjct: 666 GSIEDAKREFFEMP-EKNVVSWNAMITGYSQH------GYGSEAVSLFEEMK 710



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 292/611 (47%), Gaps = 42/611 (6%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           N  +L + K+ H  I K G   +    S+++      G  ++   A K FD     +  S
Sbjct: 22  NSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDN---AIKLFD-----DIPS 73

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA-FGEGVQ 159
           + +  +N +I G     L  + + L+  +    + PD+ TF  VL AC+   A F    Q
Sbjct: 74  SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQ 133

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  I+  GF     V N LI+ Y + G +   + VF+ +  ++ VSW ++I   ++   
Sbjct: 134 IHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGR 193

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             EA+ LF +M +  + P       V+SAC K++  +LG+++  +I + G+ +   + NA
Sbjct: 194 EDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNA 253

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           LV +Y + G +  A+Q+F +   R+ +  N+++S   + G +  AL + ++M L   +PD
Sbjct: 254 LVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPD 313

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            VT+ S +SA A +G    G+  H YV++ G+     I  +++D+Y+KC         FD
Sbjct: 314 CVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKC---------FD 364

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                 +E+A E F      + + WN ML    Q     E+  +
Sbjct: 365 ----------------------IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWI 402

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M  E +  ++ T   +   C  LGALDL + I+  + K+G   ++ + + L+DM+A+
Sbjct: 403 FLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK 462

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
            G+   A  + +R+ + DV +WTA I          +A++LF EM  QGI+ D+I F   
Sbjct: 463 HGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSA 522

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           ++AC+    +NQG  +  + + I G S  +     +V L  R G   +A    + +  + 
Sbjct: 523 ISACAGIQALNQGQQI-HAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKD 581

Query: 640 NDVIWGSLLAA 650
           N + W +L++ 
Sbjct: 582 N-ISWNALISG 591



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 256/544 (47%), Gaps = 41/544 (7%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI  +  T+ ++   C  S +  +  ++H  I K GFD +  + + LI+ Y   G++ + 
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            ++FD++   NV  W  +I     + L  + + LF  M+ E + P+  T   V+ AC+  
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124

Query: 253 QN-LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +   ++ +++ A I   G  ++ L+ N L+D+Y K G VD AK +F     ++ V    +
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +S   + G   EA+ +  +M      P      S +SA  ++     G   HG++++ GL
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
                +CN ++ +Y + G    A +IF  M  +  +S+NSLI+GL + G        FS 
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRG--------FS- 295

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                                 + A++LF  M  + +K D VT+  + SAC  +GA    
Sbjct: 296 ----------------------DRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKG 333

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K +++Y+ K G+  D+ +  +L+D++ +C D + A + F   E  +V  W   + A    
Sbjct: 334 KQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQL 393

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           GN  ++  +F +M  +G+ P+   +  +L  C+  G ++ G  +    T +     Q   
Sbjct: 394 GNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH---TQVIKSGFQFNV 450

Query: 612 YGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
           Y C  ++D+  + G L  A  +++ +  E + V W +++A   +H   D+ A A +   E
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH---DLFAEALKLFQE 506

Query: 670 LDPE 673
           ++ +
Sbjct: 507 MENQ 510



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 191/422 (45%), Gaps = 34/422 (8%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M E GI+ N  T + +   C    +L    ++ A I + G     ++ + L+D+Y+  G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           VD A +LF +    N+   N ++S  +   LA + L +   M+     PD  T  S + A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 350 -SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
            S            H  ++ +G      +CN +ID+Y K G  ++A  +F+ +  K  VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W ++I+GL +NG     RE                          +EA+ LF  M    +
Sbjct: 181 WVAMISGLSQNG-----RE--------------------------DEAILLFCQMHKSAV 209

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
                    V SAC  +    L + ++ +I K G+  +  +  ALV +++R G+   A Q
Sbjct: 210 IPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F +M +RD  ++ + I  +A  G  ++A++LF +M    +KPD +    +L+AC+  G 
Sbjct: 270 IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGA 329

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
             +G  L   +  + G+S  ++  G ++DL  +   +  A +   +   E N V+W  +L
Sbjct: 330 GYKGKQLHSYVIKM-GMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETE-NVVLWNVML 387

Query: 649 AA 650
            A
Sbjct: 388 VA 389


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 283/773 (36%), Positives = 425/773 (54%), Gaps = 36/773 (4%)

Query: 75  AQMGTFESLTYAQKAFDYYIK-DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
           A  G F  +  A++ FD Y+    E +A    +N++I  Y       +AI ++ E+   G
Sbjct: 143 AVYGGFGMVDEARRMFDEYVGVGGERNAV--SWNTMISAYVKNDQSGDAIGVFREMVWSG 200

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
             P++F F  V+NACT S     G QVHGA+V+ G+++DVF  N L++ Y + GDI    
Sbjct: 201 ERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAA 260

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            VF++M   +VVSW + I  C        A+ L  +M   G+ PN  T+  V+ ACA   
Sbjct: 261 TVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAG 320

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
              LG ++  ++ +     +  +   LVDMY K G +D A+++F     R+L+L N ++S
Sbjct: 321 AFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALIS 380

Query: 314 NYVRLGLAREALAILDEMLLHGPRPD--RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
                G   E L++   M   G   D  R T+ S + ++A    +   R  H    + GL
Sbjct: 381 GCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGL 440

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
                + N +ID Y KCG+ + A +                               VF E
Sbjct: 441 LSDSHVINGLIDSYWKCGQLDYAIK-------------------------------VFKE 469

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
               D IS  TM+  L+Q +  E+A++LF  ML + ++ D   +  + +AC  L A +  
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K ++A++ K     D+    ALV  +A+CG  + A   F  + +R + +W+A IG +A  
Sbjct: 530 KQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQH 589

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G+G++A++LF+ ML +G+ P+ I    VL+AC+H GLV+     F SM +  G+     H
Sbjct: 590 GHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEH 649

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y CM+D+LGRAG L +A++L+ +MP + N  +WG+LL A + H++ ++   AAE++  L+
Sbjct: 650 YACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLE 709

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           PEKSG HVLL+N YASAG W  +A+VR  MK+  ++K P  S +E+  KVH F  GD+SH
Sbjct: 710 PEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSH 769

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
           P   +I   L E+   +  AGYVP++   L DVD  EK+ LLSHHSE+LA+AF LIST  
Sbjct: 770 PMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPS 829

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             PIRV KNLR+C DCH   K +SK+  REII+RD NRFH F  G+CSC D+W
Sbjct: 830 GAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 175/603 (29%), Positives = 277/603 (45%), Gaps = 73/603 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           ++SL+  YS  G+  +A+  +  + G G+  ++F  P VL  C     F  G QVH   V
Sbjct: 71  WSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAPDVRF--GAQVHALAV 127

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM----SERNVVSWTSLICACARRDLPK 221
                 DVFV N L+  YG  G + + RR+FDE      ERN VSW ++I A  + D   
Sbjct: 128 ATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSG 187

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           +A+ +F EMV  G +PN     CV++AC   ++LE G +V   +   G + +    NALV
Sbjct: 188 DAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALV 247

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY K G ++ A  +F +    ++V  N  +S  V  G    AL +L +M   G  P+  
Sbjct: 248 DMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVF 307

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+ S + A A  G    GR  HG++++   +  + +   ++DMY K G  + A ++FD M
Sbjct: 308 TLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFM 367

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             + ++ WN+LI+G   +G                                  E + LF 
Sbjct: 368 PRRDLILWNALISGCSHDG-------------------------------RHGEVLSLFH 396

Query: 462 VMLSERIKVD--RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
            M  E + +D  R T+  V  +     A+   + ++A  EK G+  D  +   L+D + +
Sbjct: 397 RMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWK 456

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG    A++VF+     D+ + T  + A++   +GE A++LF +MLR+G++PDS V   +
Sbjct: 457 CGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSL 516

Query: 580 LTACSHGGLVNQG----WHLFR---------------------SMTD----IHGVSPQ-I 609
           L AC+      QG     HL +                     S+ D      G+  + I
Sbjct: 517 LNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGI 576

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           V +  M+  L + G    ALDL   M    V PN +   S+L+AC     VD A    E 
Sbjct: 577 VSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFES 636

Query: 667 ITE 669
           + E
Sbjct: 637 MKE 639



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 198/428 (46%), Gaps = 41/428 (9%)

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
           T  S F  G  +H  ++K G        N L+  Y  C      R VFDE+ +   VSW+
Sbjct: 16  TSRSLFA-GAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWS 72

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           SL+ A +   +P++A+  F  M   G+  N   +  V+  CA   ++  G +V A     
Sbjct: 73  SLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP--DVRFGAQVHALAVAT 129

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGEC----KDRNLVLCNTIMSNYVRLGLAREA 324
            +  +  + NALV +Y   G VD A+++F E      +RN V  NT++S YV+   + +A
Sbjct: 130 RLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDA 189

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           + +  EM+  G RP+       V+A     DL  GR  HG V+R G E      N ++DM
Sbjct: 190 IGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDM 249

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y K G  EMA  +F+ M    VVSWN+ I+G + +              G DH       
Sbjct: 250 YSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTH--------------GHDH------- 288

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
                      A+EL   M S  +  +  T+  V  AC   GA +L + I+ ++ K    
Sbjct: 289 ----------RALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVAD 338

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            D  +A  LVDM+A+ G    A +VF  M +RD+  W A I   + +G   + + LF+ M
Sbjct: 339 FDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM 398

Query: 565 LRQGIKPD 572
            ++G+  D
Sbjct: 399 RKEGLDLD 406


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 300/852 (35%), Positives = 448/852 (52%), Gaps = 82/852 (9%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +  CKT++++K  H  +L  G       I  +  T   + T+ SL     A     +   
Sbjct: 35  IHKCKTISQVKLIHQKLLSFG-------ILTLNLTSHLISTYISLGCLSHAVSLLRRFPP 87

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           + A ++ +NSLIR Y   G   + +S +  +      PD +TFPFV  AC + S+   G 
Sbjct: 88  SDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGD 147

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
             H      GF  +VFV N L+  Y  CG + D R+VFDEM   +VVSW S+I + A+  
Sbjct: 148 SSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLG 207

Query: 219 LPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            PK A+ +F +M  E G +P+ +T+V V+  CA +    LG +   +     M  N  + 
Sbjct: 208 KPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVG 267

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY---------VRL---------- 318
           N LVDMY K G +D A  +F     +++V  N +++ Y         VRL          
Sbjct: 268 NCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIK 327

Query: 319 ----------------GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
                           GL  EAL +  +ML  G +P+ VT++S +S  A +G L+ G+  
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387

Query: 363 HGYVLR-------NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           H Y ++       NG    + + N +IDMY KC K ++A  +FD +S K           
Sbjct: 388 HCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKE---------- 437

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE--RIKVDRV 473
                              RD ++W  M+GG +Q     +A+EL   M  E  + + +  
Sbjct: 438 -------------------RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRR 532
           T+     AC  L AL + K I+AY  +N  +   + ++  L+DM+A+CGD   A  VF  
Sbjct: 479 TISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDN 538

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M +++   WT+ +    M G GE+A+ +F EM R G K D +  + VL ACSH G+++QG
Sbjct: 539 MMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F  M    GVSP   HY C+VDLLGRAG L  AL LI+ MP+EP  V+W +LL+ C+
Sbjct: 599 MEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCR 658

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H  V++  YAA++ITEL     G + LLSN+YA+AG+W +V R+R  M+ +GI+K PG 
Sbjct: 659 IHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGC 718

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           S +E       F  GD++HP    I  +L +   R++D GYVP+    L DVD++EK  L
Sbjct: 719 SWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDL 778

Query: 773 LSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHF 832
           L  HSEKLA+A+G+++T +   IR+ KNLR+C DCH+    +S++ D EII+RD++RFH 
Sbjct: 779 LFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHH 838

Query: 833 FRQGSCSCSDFW 844
           F+ G CSC  +W
Sbjct: 839 FKNGLCSCKGYW 850


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/634 (42%), Positives = 388/634 (61%), Gaps = 4/634 (0%)

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
           C  A R+   +AV  +  M+  G  P++ T   ++ A A+  +      V A++ + GM 
Sbjct: 19  CLVAARE---DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMG 75

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            NA +  +LV  Y   G    A+ L  E +    V+ N ++S + R     EA     +M
Sbjct: 76  RNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDM 135

Query: 332 LLHGPRPDRVTMLSAVSASAQ-LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
              G  P  VT +S +SA  +  GD+L G   HG V+ +G+     + N ++DMY +C  
Sbjct: 136 ARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECAD 195

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A ++FD M  ++VVSW SL++GL + G V+ AR++F  MP RD +SW  M+ G  Q 
Sbjct: 196 MESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQA 255

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
             F EA+E+FR M    +  D  TMV V +AC  LGAL++ +W+  Y+ + GI  D  + 
Sbjct: 256 ARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVG 315

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            AL+DM+++CG  +RA+ VF+ M  RD   WTA I  +A+ G GE+A+E+F+ M+     
Sbjct: 316 NALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSET 375

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD + F+GVLTAC+H GLV++G   F SM + + ++P +VHYGC++DL GRAG + EALD
Sbjct: 376 PDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALD 435

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            I  MP+ PN  IWG+LLAAC+ H N +I     ER+ ++DPE S V+ LLSNIYA   +
Sbjct: 436 AIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNR 495

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W +V R+R  + E+GI+K PG S IE+NG +HEF +GD+SHP    I   L  +   L +
Sbjct: 496 WEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNN 555

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            GY PD+T V ++V E+EK+ +L  HSEKLA+AF L+S+     IR+VKNLR+C DCH+ 
Sbjct: 556 VGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNA 615

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KL+S++Y RE++VRD  RFH FR G CSC D+W
Sbjct: 616 IKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 207/490 (42%), Gaps = 66/490 (13%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +A++ Y  +   G +PD +TFP +L A  + S+      VH  +VK G  R+  V   L+
Sbjct: 26  DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
             Y   GD    R +  E      V W +LI    R     EA   F +M   G  P  V
Sbjct: 86  TAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPV 145

Query: 241 TMVCVISACAK-LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC------------ 287
           T V V+SAC K   ++ LG +V   +   G+  +  + NALVDMY +C            
Sbjct: 146 TYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDG 205

Query: 288 -------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
                              G VD A+ LFG   +R+ V    ++  YV+    REAL + 
Sbjct: 206 MQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMF 265

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            EM       D  TM+S ++A AQLG L  G     Y+ R G++    + N +IDMY KC
Sbjct: 266 REMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKC 325

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G  E A  +F  M ++   +W ++I GL  NG  E                         
Sbjct: 326 GSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGE------------------------- 360

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDM 507
                 EA+E+F  M+      D VT +GV +AC + G +D  +  +  + E   I  ++
Sbjct: 361 ------EAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNV 414

Query: 508 QLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
                ++D+F R G    A+    +M    + + W   + A  + GN E   EL  E L 
Sbjct: 415 VHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIG-ELVTERLL 473

Query: 567 QGIKPDSIVF 576
           Q    +S V+
Sbjct: 474 QMDPENSTVY 483



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 216/480 (45%), Gaps = 59/480 (12%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P + ++    +   ++  H H++K G+G      + +V       T  +      A    
Sbjct: 48  PLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV-------TAYAAGGDGAAARAL 100

Query: 94  IKDNETSATLFMYNSLIRGYS-CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           + + E   T  ++N+LI G++ C   G EA   +V++A  G  P   T+  VL+AC K +
Sbjct: 101 LSERERD-TPVVWNALISGHNRCRRFG-EACCSFVDMARAGAAPTPVTYVSVLSACGKGT 158

Query: 153 A-FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
                G+QVHG +V  G   D+ VEN L++ Y EC D+    ++FD M  R+VVSWTSL+
Sbjct: 159 GDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLL 218

Query: 212 CACAR-------RDL----P--------------------KEAVYLFFEMVEEGIKPNSV 240
               R       RDL    P                    +EA+ +F EM    +  +  
Sbjct: 219 SGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEF 278

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           TMV VI+ACA+L  LE+G+ V  Y+   G+K +A + NAL+DMY KCG+++ A  +F + 
Sbjct: 279 TMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
             R+      I+      G   EA+ +   M+     PD VT +  ++A    G +  GR
Sbjct: 339 HHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGR 398

Query: 361 -----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM---SNKTVVSWNSL 412
                M   Y +   +  +  I    ID++ + GK   A    D M    N T+  W +L
Sbjct: 399 EFFLSMRETYNIAPNVVHYGCI----IDLFGRAGKITEALDAIDQMPMTPNSTI--WGTL 452

Query: 413 IAGLIKNGDVESAR---EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           +A    +G+ E      E   +M   +   +  +     + N +E+   L   ++ + IK
Sbjct: 453 LAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIK 512


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 272/806 (33%), Positives = 443/806 (54%), Gaps = 45/806 (5%)

Query: 40  KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           K C T   L + H  +++ G  H  + ++K+      +G     T   +A  + +   + 
Sbjct: 17  KAC-TFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGA----TRHARALFFSVPKPD- 70

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGV 158
              +F++N LI+G+S       +IS Y  L     L PD FT+ F ++A    +    G+
Sbjct: 71  ---IFLFNVLIKGFS-FSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GM 123

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +H   V  GFD ++FV + L++ Y +   +   R+VFD+M +R+ V W ++I    R  
Sbjct: 124 CLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNC 183

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
              ++V +F +MV +G++ +S T+  V+ A A++Q +++G  +     +LG   +  ++ 
Sbjct: 184 CYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLT 243

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            L+ ++ KC  VDTA+ LFG  +  +LV  N ++S +   G    A+    E+L+ G R 
Sbjct: 244 GLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRV 303

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
              TM+  +  S+  G L       G+ +++G     S+   +  +Y +  + ++A ++F
Sbjct: 304 SSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLF 363

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           D  S KTV +                               WN M+ G  Q  + E A+ 
Sbjct: 364 DESSEKTVAA-------------------------------WNAMISGYAQSGLTEMAIS 392

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF+ M++     + VT+  + SAC  LGAL   K ++  I+   +  ++ ++TAL+DM+A
Sbjct: 393 LFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYA 452

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG+   A Q+F    +++   W   I    + G G++A++LFNEML  G +P S+ F+ 
Sbjct: 453 KCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLS 512

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL ACSH GLV +G  +F +M + + + P   HY CMVD+LGRAG L +AL+ I+ MPVE
Sbjct: 513 VLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVE 572

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P   +WG+LL AC  H++ ++A  A+ER+ ELDP   G +VLLSNIY+    +   A VR
Sbjct: 573 PGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVR 632

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
             +K++ + K PG + IEVNG  H F  GD SH +  +I + L E+  ++R+ GY  +  
Sbjct: 633 EAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETV 692

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
             L DV+E+EK+ + + HSEKLA+AFGLI+T     IR++KNLR+C DCH+  K +SK+ 
Sbjct: 693 TALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKIT 752

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
           +R I+VRD NRFH F+ G CSC D+W
Sbjct: 753 ERVIVVRDANRFHHFKDGICSCGDYW 778


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/783 (35%), Positives = 430/783 (54%), Gaps = 74/783 (9%)

Query: 136 PDKFTFPFVLNACT--------KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           P   +   +L  CT        KS+       VH  ++K G    V++ N L+N Y + G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRD-----------LPK--------------- 221
             +  R++FDEM  R   SW +++ A A+R            LP+               
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123

Query: 222 -----EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
                +A+ +  EM+ EGI+P+  T+  V+++ A  + LE G +V ++I +LG++ N  +
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183

Query: 277 VNALVDMYMKCG-------------------------------AVDTAKQLFGECKDRNL 305
            N+L++MY KCG                                +D A   F +  +R++
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           V  N+++S Y + G    AL +  +ML      PDR T+ S +SA A L  L  G   H 
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHS 303

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK--TVVSWNSLIAGLIKNGDV 422
           +++  G +    + N +I MY +CG  E A R+ +    K   +  + +L+ G IK GD+
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
             A+ +F  +  RD ++W  M+ G  Q  ++ EA+ LFR M+ E  + +  T+  + S  
Sbjct: 364 NEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVA 423

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
             L +L   K I+    K+G    + ++ AL+ M+A+ G    A + F  +  +RD  +W
Sbjct: 424 SSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSW 483

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           T+ I A+A  G+ E+A+ELF  ML +G++PD I +VGV +AC+H GLVNQG   F  M D
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
           +  + P + HY CMVDL GRAGLL EA + I+ MP+EP+ V WGSLL+AC+ ++N+D+  
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGK 603

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
            AAER+  L+PE SG +  L+N+Y++ GKW   A++R  MK+  ++K  G S IEV  KV
Sbjct: 604 VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKV 663

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           H F   D  HP+ N I   ++++   ++  GYVPD  +VL D++E+ K+ +L HHSEKLA
Sbjct: 664 HAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLA 723

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +AFGLIST     +R++KNLR+C DCH+  K +SK+  REIIVRD  RFH F+ G CSC 
Sbjct: 724 IAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCR 783

Query: 842 DFW 844
           D+W
Sbjct: 784 DYW 786



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 152/330 (46%), Gaps = 56/330 (16%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+  FD  +KD +  A    + ++I GY   GL  EAI+L+  + G    P+ +T   +L
Sbjct: 366 AKNIFDS-LKDRDVVA----WTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAML 420

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNV 204
           +  +  ++ G G Q+HG+ VK G    V V N LI  Y + G I    R FD +  ER+ 
Sbjct: 421 SVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDT 480

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           VSWTS+I A A+    +EA+ LF  M+ EG++P+ +T V V SAC               
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT-------------- 526

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV-------R 317
                                  G V+  +Q F   KD + ++    +S+Y        R
Sbjct: 527 ---------------------HAGLVNQGRQYFDMMKDVDKII--PTLSHYACMVDLFGR 563

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS- 376
            GL +EA   +++M +    PD VT  S +SA     ++  G++    +L   LE  +S 
Sbjct: 564 AGLLQEAQEFIEKMPI---EPDVVTWGSLLSACRVYKNIDLGKVAAERLLL--LEPENSG 618

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
             + + ++Y  CGK E A +I   M +  V
Sbjct: 619 AYSALANLYSACGKWEEAAKIRKSMKDGRV 648


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 247/569 (43%), Positives = 360/569 (63%), Gaps = 17/569 (2%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A+QLF    + ++   N +   Y R+   +  +++  EML    +PD  T         +
Sbjct: 67  ARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTR 126

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
              L  GR  H +V++ GL+      N +I+MY  CG  +MA  IFD      VV+WN++
Sbjct: 127 SVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAM 186

Query: 413 IAG-----------------LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           I+G                  +  G V++AR+ F +MP RDH+SW  M+ G  + N ++E
Sbjct: 187 ISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKE 246

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A+ LFR M + +IK D  TMV V +AC  LGAL+L +WI  YI+KN +  D  +  AL+D
Sbjct: 247 ALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALID 306

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ +CG+ + A+ +F  + +RD   WTA +  +A+ G GE+A+ +F++ML+  + PD + 
Sbjct: 307 MYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVT 366

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           +VGVL+AC+H G+V++G   F SMT  HG+ P I HYGCMVDLLG+AG L EA ++IK+M
Sbjct: 367 YVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNM 426

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P++PN ++WG+LL AC+ H++ ++A  A E+I EL+P    V+VL  NIYA+  KW  + 
Sbjct: 427 PMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLR 486

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
            +R  M ++GI+K PG S IE+NG VHEF +GD+SHP+   I   L +M   L+ AGY P
Sbjct: 487 ELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSP 546

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           + + V LD+ E++K+  +  HSEKLA+AFGLI++   + IR+VKNLR+C DCH  AKLVS
Sbjct: 547 NTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVS 606

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KVYDRE+IVRD  RFH FR GSCSC D+W
Sbjct: 607 KVYDREVIVRDRTRFHHFRHGSCSCKDYW 635



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 226/498 (45%), Gaps = 60/498 (12%)

Query: 26  AKTTP-KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
           ++++P  ++P +   + CK++  LKQ H   +K G+   P   +K++  C     F  + 
Sbjct: 7   SQSSPVTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSR-EFGDMC 65

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
           YA++ FD          ++F +N + +GYS I      +SLY+E+    + PD +T+PF+
Sbjct: 66  YARQLFD-----TIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFL 120

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG---------------DI 189
               T+S A   G ++H  +VK G D +VF  N LIN Y  CG               D+
Sbjct: 121 FKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDV 180

Query: 190 VD---------------------------------GRRVFDEMSERNVVSWTSLICACAR 216
           V                                   R+ F +M ER+ VSWT++I    R
Sbjct: 181 VTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLR 240

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
            +  KEA+ LF EM    IKP+  TMV V++ACA+L  LELG+ +  YID+  +K +  +
Sbjct: 241 LNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFV 300

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            NAL+DMY KCG V+ A  +F     R+      ++      G   EAL +  +ML    
Sbjct: 301 GNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASV 360

Query: 337 RPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            PD VT +  +SA    G +  G +       R+G+E   +    M+D+  K G  + A 
Sbjct: 361 TPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAH 420

Query: 396 RIFDHMSNK-TVVSWNSLIAGLIKNGDVESAR---EVFSEMPGRDHISWNTMLGGLTQEN 451
            I  +M  K   + W +L+     + D E A    E   E+   +   +          N
Sbjct: 421 EIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACN 480

Query: 452 MFEEAMELFRVMLSERIK 469
            +++  EL +VM+   IK
Sbjct: 481 KWDKLRELRQVMMDRGIK 498



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 201/459 (43%), Gaps = 83/459 (18%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H   +K G   +  ++N +++F    E GD+   R++FD + E +V SW  +    +R
Sbjct: 32  QIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSR 91

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
              PK  V L+ EM+E  +KP+  T   +     +   L+LG  +  ++ + G+ +N   
Sbjct: 92  IACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFA 151

Query: 277 VNALVDMYMKCGAVDTAKQLFG-ECK---------------------------------- 301
            NAL++MY  CG +D A+ +F   CK                                  
Sbjct: 152 HNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTG 211

Query: 302 -------------DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
                        +R+ V    ++  Y+RL   +EAL +  EM     +PD  TM+S ++
Sbjct: 212 QVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLT 271

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A AQLG L  G     Y+ +N ++    + N +IDMY KCG  EMA  IF+ +  +   +
Sbjct: 272 ACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFT 331

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W +++ GL  NG  E                               EA+ +F  ML   +
Sbjct: 332 WTAMVVGLAINGCGE-------------------------------EALNMFSQMLKASV 360

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAM 527
             D VT VGV SAC + G +D  K  +A +  ++GI  ++     +VD+  + G  + A 
Sbjct: 361 TPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAH 420

Query: 528 QVFRRMEKRDVS-AWTAAIGAMAMEGNGEQAVELFNEML 565
           ++ + M  +  S  W A +GA  +  + E A     ++L
Sbjct: 421 EIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQIL 459


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 270/807 (33%), Positives = 437/807 (54%), Gaps = 43/807 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +    T   L Q H   +  G     + ++K+     ++  F +  +A+  F    K + 
Sbjct: 19  INKASTFPHLAQTHAQFILNGYRFDLATLTKLT---QKLFDFSATRHARALFFSVPKPD- 74

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEG 157
               +F++N L+RG+S       +ISLY  L     + PD FT+ F + AC+        
Sbjct: 75  ----IFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL--- 127

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           + +H   +  G+  +VFV + L++ Y +   +V  R+VFD M ER+ V W ++I    + 
Sbjct: 128 MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKN 187

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
               +++ LF EMV +G++ +S T+  V+ A A+LQ L++G  +     ++G      ++
Sbjct: 188 CCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVL 247

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
             L+ +Y KCG V+TA+ LF      +L+  N ++S +   G    ++ +  E+L  G R
Sbjct: 248 TGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGER 307

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
               T++  +   +  G L      HG+ +++G+    ++      +Y K          
Sbjct: 308 VSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLN-------- 359

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                  +++ AR +F E P +  ++WN M+ G TQ    E A+
Sbjct: 360 -----------------------EIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAI 396

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF+ M+      + VT+  + SAC  LG+L   KW++  I+   +  ++ ++TALVDM+
Sbjct: 397 SLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMY 456

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG+   A Q+F  M +++   W   I    + G G +A++L+NEML  G  P ++ F+
Sbjct: 457 AKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFL 516

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL ACSH GLV +G  +F +M + + + P I HY CMVD+LGR+G L +AL+ IK MPV
Sbjct: 517 SVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPV 576

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           EP   +WG+LL AC  H++ DIA  A+ER+ ELDP   G +VLLSNIY+    +   A +
Sbjct: 577 EPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASI 636

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  +K++ + K PG + IEVNG  H F SGD SH    +I + L ++  ++R+ GY  + 
Sbjct: 637 RQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAET 696

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
              L DV+E+EK+  ++ HSEKLA+AFGLI+T     IR++KNLR+C DCH+  K +SK+
Sbjct: 697 VPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKI 756

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +R I+VRD NRFH F+ G CSC D+W
Sbjct: 757 TERVIVVRDANRFHHFKDGICSCGDYW 783


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/644 (40%), Positives = 384/644 (59%), Gaps = 32/644 (4%)

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDR 260
           R+  S+  LI +  R   P++A++LF EM+++  + P+  T+   + +C+++ +L +G  
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V AY  + G   +  ++N+L+ MY  CG V  A  LF   + + ++  N +++ YV+ G 
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            +E + +   ML      D VT+LS  +A  +LGD   G+    Y    G+    ++   
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++DMY KCG                               +++ AR +F  M  RD ++W
Sbjct: 313 LVDMYAKCG-------------------------------ELDKARRLFDRMHSRDVVAW 341

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           + M+ G TQ +   EA+ +F  M    +  + VTMV V SAC  LGAL+  KW+++YI +
Sbjct: 342 SAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRR 401

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
             +   + L TALVD +A+CG  + A++ F  M  R+   WTA I  MA  G   +A+EL
Sbjct: 402 KDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALEL 461

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F+ ML   I+P  + F+GVL ACSHG LV +G   F SMT  +G+ P+I HYGCMVDLLG
Sbjct: 462 FSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLG 521

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAGL+ EA   I++MP+EPN V+W +LL+AC  H+NV+I   A ++I  LDP  SG ++L
Sbjct: 522 RAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYIL 581

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSN YAS G+W N A VR +MKE+G+ K+PG S IE+ G + EF + D  HP++  I   
Sbjct: 582 LSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEK 641

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           + EM   ++  GY+P+  +  LDVDE EK+  +SHHSEKLA+AFGL+ +     IR+ KN
Sbjct: 642 VHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKN 701

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCHS  KL+SKVY+REIIVRD NRFH F+ G CSC+D+W
Sbjct: 702 LRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 240/532 (45%), Gaps = 39/532 (7%)

Query: 45  LNELKQPHCHILKQG-LGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           L ++ Q H  +LK G +   P     ++   A      S  +   A   +        + 
Sbjct: 76  LRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHPPRSA 135

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
             YN LIR +   G   +A+ L+VE L    + PD+ T    + +C++      G  V  
Sbjct: 136 RSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQA 195

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
              K GF  D FV N LI+ Y  CGD+V    +F  +  + V++W ++I    +    KE
Sbjct: 196 YAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKE 255

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            V +F  M+E     + VT++ V +AC +L +  LG  +  Y +E GM  +  +  ALVD
Sbjct: 256 VVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVD 315

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG +D A++LF     R++V  + ++S Y +    REALAI +EM      P+ VT
Sbjct: 316 MYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVT 375

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M+S +SA A LG L  G+  H Y+ R  L     +   ++D Y KCG  + A + F+ M 
Sbjct: 376 MVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMP 435

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            +   +W +LI G+  NG                                  EA+ELF  
Sbjct: 436 VRNTWTWTALIKGMASNGRS-------------------------------REALELFSS 464

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG 521
           ML   I+   VT +GV  AC +   ++  +  +  + ++ GI   ++    +VD+  R G
Sbjct: 465 MLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAG 524

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
               A Q  R M  + +   W A + A  +  N    VE+  E L+Q +  D
Sbjct: 525 LIDEAYQFIRNMPIEPNAVVWRALLSACTVHKN----VEIGEEALKQIVPLD 572


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/684 (39%), Positives = 397/684 (58%), Gaps = 65/684 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF+   E N++ W +++   A        + ++  MV  G  PN+ T   ++ +CAK + 
Sbjct: 39  VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKT 98

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
            E G ++ A + +LG + +     +L+ MY + G ++ A+++F     R++V C  +++ 
Sbjct: 99  FEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITG 158

Query: 315 YVRLGLAR-------------------------------EALAILDEMLLHGPRPDRVTM 343
           Y   G  R                               EAL +  EM+    RPD  T+
Sbjct: 159 YASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTL 218

Query: 344 LSAVSASAQLGDLLCGRMCHGYVL-RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           +S +SA AQ G +  GR  H  V   +G      I N  I +Y KCG             
Sbjct: 219 VSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG------------- 265

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                             DVE A  +F  +  +D +SWNT++GG T  N+++EA+ LF+ 
Sbjct: 266 ------------------DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQE 307

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARC 520
           ML      + VTM+ V  AC +LGA+D+ +WI+ YI+K   G+     L T+L+DM+A+C
Sbjct: 308 MLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKC 367

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           GD + A QVF  M  + +S+W A I   AM G    A +LF+ M + GI+PD I  VG+L
Sbjct: 368 GDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLL 427

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
           +ACSH GL++ G H+F+S+T  + ++P++ HYGCM+DLLG AGL  EA ++I  MP+EP+
Sbjct: 428 SACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPD 487

Query: 641 DVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQ 700
            VIW SLL AC+ H N+++A   A+++ E++PE SG +VLLSNIYA+AG+W +VAR+R  
Sbjct: 488 GVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREV 547

Query: 701 MKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNV 760
           +  +G++K+PG SSIE++  VHEF  GD+ HP+   I  ML EM+  L +AG+VPD + V
Sbjct: 548 LNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEV 607

Query: 761 LLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDR 820
           L +++E+ K+  L HHSEKLA+AFGLIST     + VVKNLR+C +CH   KL+SK+Y R
Sbjct: 608 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKR 667

Query: 821 EIIVRDNNRFHFFRQGSCSCSDFW 844
           EI+ RD  RFH FR G CSC D+W
Sbjct: 668 EIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 168/558 (30%), Positives = 278/558 (49%), Gaps = 74/558 (13%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H  ++K GL +    +SK++  C     F+ L YA   F+   + N     L ++N+++R
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPN-----LLIWNTMLR 56

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG--- 168
           G +     V  + +YV +   G +P+ +TFPF+L +C KS  F EG Q+H  ++K+G   
Sbjct: 57  GLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCEL 116

Query: 169 ------------------------FD----RDVFVENCLINFYGECGDIVDGRRVFDEMS 200
                                   FD    RDV     LI  Y   GD+   R+VFD ++
Sbjct: 117 DRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXIT 176

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           ER+VVSW ++I         +EA+ LF EM+   ++P+  T+V V+SACA+  ++ELG  
Sbjct: 177 ERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGRE 236

Query: 261 VCAYIDE-LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           +   +D+  G  ++  +VNA + +Y KCG V+ A  LF     +++V  NT++  Y  + 
Sbjct: 237 IHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMN 296

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSI 377
           L +EAL +  EML  G  P+ VTMLS + A A LG +  GR  H Y+ +   G+    ++
Sbjct: 297 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSAL 356

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
             ++IDMY KCG  E A ++F+ M +K++ SWN++I G   +G   +A ++FS M     
Sbjct: 357 RTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMR---- 412

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                                         I+ D +T+VG+ SAC + G LDL + I+  
Sbjct: 413 ---------------------------KNGIEPDDITLVGLLSACSHSGLLDLGRHIFKS 445

Query: 498 IEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           + ++  I   ++    ++D+    G  + A ++   M  + D   W + + A  M GN E
Sbjct: 446 VTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLE 505

Query: 556 QAVELFNEMLRQGIKPDS 573
            A E F + L + I+P++
Sbjct: 506 LA-ESFAQKLME-IEPEN 521



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 140/338 (41%), Gaps = 47/338 (13%)

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI----SWNTMLGGLTQ 449
           A  +F+      ++ WN+++ GL  + D+ S  E++  M    H+    ++  +L    +
Sbjct: 36  AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
              FEE  ++   ++    ++DR     + S     G L+ A+ ++    +     D+  
Sbjct: 96  SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQR----DVVS 151

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
            TAL+  +A  GD + A +VF  + +RDV +W A I         E+A+ELF EM+R  +
Sbjct: 152 CTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNV 211

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG------ 623
           +PD    V VL+AC+  G +  G  +   + D HG    +      + L  + G      
Sbjct: 212 RPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIAS 271

Query: 624 -------------------------LLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQ 655
                                    L  EAL L + M      PNDV   S+L AC    
Sbjct: 272 GLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLG 331

Query: 656 NVDIA----AYAAERITELDPEKSGVHVLLSNIYASAG 689
            +DI      Y  +R+  +    S +   L ++YA  G
Sbjct: 332 AIDIGRWIHVYIDKRLKGV-TNGSALRTSLIDMYAKCG 368


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/806 (34%), Positives = 459/806 (56%), Gaps = 45/806 (5%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C  ++  KQ H  ++  G        +K++   A +G    + +A+  FD        + 
Sbjct: 53  CTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLG---DIPHARLTFD-----QIQTK 104

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQV 160
            ++ +NS+I  Y+ IG    A+  + E      L  D +TFP V+ AC       +G +V
Sbjct: 105 DVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKV 161

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           H  ++K+GF+ DV++    I+FY   G +     +FD M  R++ +W ++I         
Sbjct: 162 HCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKV 221

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
            EA+ +F EM  + +  +SVT+  ++  C +L ++  G  +  Y  +LG++ +  + NAL
Sbjct: 222 AEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNAL 281

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           ++MY K G + +A+ +F + K R++V  N++++ + +      AL + ++M   G  PD 
Sbjct: 282 INMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDL 341

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACRIFD 399
           +T++S  S +A+LG+ L  R  HG+V R      D ++ N +IDMY K G          
Sbjct: 342 LTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGF--------- 392

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                 ++SAR+VF  +P +D ISWN+++ G +Q  +  EA+++
Sbjct: 393 ----------------------IDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDV 430

Query: 460 FRVMLSERIKV-DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           +  M      V ++ T V + +A   LGAL      +  + KN ++ D+ ++T LVDM+ 
Sbjct: 431 YSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYG 490

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A+ +F  +  +   +W A I    + G G +AV+LF EM  +G+KPD I FV 
Sbjct: 491 KCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVS 550

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L+ACSH GLV++G   F+ M + +G+ P + HYGCMVDL GRAG L +A + +K+MPV 
Sbjct: 551 LLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVR 610

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+  +WG+LL AC+ H+NV++    ++ + +++ E  G +VLLSNIYA  G W  V  VR
Sbjct: 611 PDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVR 670

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
              +++G++K PG SSIEV+ K+  F +G+++HP+   I S LR +  +++  GYVPD  
Sbjct: 671 SLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYN 730

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            VL DV++ EK+ +L+ HSE+LAMAFG+IST     +++ KNLR+C DCH+  K +SK+ 
Sbjct: 731 FVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKIT 790

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
           +REIIVRD+NRFH F+ G CSC D+W
Sbjct: 791 EREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 261/542 (48%), Gaps = 63/542 (11%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           ++ C  L++ ++ HC +LK G      +   V    + +  +    +   A + +  DN 
Sbjct: 149 IRACGNLDDGRKVHCLVLKLG------FECDVYIAASFIHFYSRFGFVSLACNLF--DNM 200

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
               +  +N++I G+   G   EA+ ++ E+    +  D  T   +L  C +      GV
Sbjct: 201 MIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGV 260

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +H   +K+G + D+FV N LIN Y + G++     +F++M  R++VSW SL+ A  +  
Sbjct: 261 LIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNK 320

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL-------ELGDRVCAYIDELGMK 271
            P  A+ ++ +M   G+ P+ +T+V + S  A+L N            R C ++ ++ + 
Sbjct: 321 KPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALG 380

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
                 NA++DMY K G +D+A+++F     ++++  N++++ Y + GLA EA+ +   M
Sbjct: 381 ------NAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSM 434

Query: 332 LLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
             + G  P++ T +S ++A +QLG L  G   HG +++N L     +   ++DMY KCGK
Sbjct: 435 RYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGK 494

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGG 446
              A  +F  + +++ VSWN++I+    +G    A ++F EM       DHI++ ++L  
Sbjct: 495 LADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLL-- 552

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHC 505
                                            SAC + G +D  +W +  +++  GI  
Sbjct: 553 ---------------------------------SACSHSGLVDEGQWCFQLMQETYGIRP 579

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            ++    +VD+F R G  ++A    + M  R DVS W A +GA  +  N E    + + +
Sbjct: 580 SLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHL 639

Query: 565 LR 566
           L+
Sbjct: 640 LK 641



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 103/263 (39%), Gaps = 48/263 (18%)

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           Y   + LAK ++A +  +G    + L+  L++ +A  GD   A   F +++ +DV  W +
Sbjct: 52  YCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNS 111

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTAC------------------- 583
            I A A  G+   AV+ FNE L    ++ D   F  V+ AC                   
Sbjct: 112 MISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFE 171

Query: 584 -------------SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
                        S  G V+   +LF +M     +   I  +  M+      G + EAL+
Sbjct: 172 CDVYIAASFIHFYSRFGFVSLACNLFDNM-----MIRDIGTWNAMISGFYLNGKVAEALE 226

Query: 631 LIKSM---PVEPNDVIWGSLLAACQKHQN----VDIAAYAAERITELDPEKSGVHVLLSN 683
           +   M    V  + V   SLL  C +  +    V I  YA +   E D         L N
Sbjct: 227 VFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNA---LIN 283

Query: 684 IYASAGKWTNVARVRLQMKEQGI 706
           +YA  G+  +   +  QMK + I
Sbjct: 284 MYAKFGELRSAETIFNQMKVRDI 306


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 274/819 (33%), Positives = 449/819 (54%), Gaps = 43/819 (5%)

Query: 30  PKDSPSIGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  +  +  L+ C   K ++  ++ H H+  +G          ++   AQ G   S+  A
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCG---SVPEA 58

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           Q+ F+   + +     +F +  +I  Y   G    A+ ++ ++    ++P K T+  +LN
Sbjct: 59  QQVFEILERKD-----VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILN 113

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           AC  + +  +G+++HG I++ GF+ DVFV   LIN Y +CG +      F  +  R+VVS
Sbjct: 114 ACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS 173

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           WT++I AC + D    A +L+  M  +G+ PN +T+  V +A      L  G  V   + 
Sbjct: 174 WTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVS 233

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
              M+++  ++N+ V+M+   G +  A++LF +  DR++V  N +++ YV+     EA+ 
Sbjct: 234 SGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVR 293

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +   +   G + + +T +  ++    L  L  G++ H  V   G +    +   ++ +Y 
Sbjct: 294 LFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYG 353

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           +C     A +IF  M +K V++W  +     +NG                          
Sbjct: 354 RCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNG-------------------------- 387

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                  +EA++LF+ M  E  +    T+V V   C +L AL   + I+++I +N    +
Sbjct: 388 -----FRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRME 442

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           M + TAL++M+ +CG    AM VF +M KRD+  W + +GA A  G  ++ ++LFN+M  
Sbjct: 443 MVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQL 502

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
            G+K D++ FV VL+A SH G V  G+  F +M     ++P    YGC+VDLLGRAG + 
Sbjct: 503 DGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQ 562

Query: 627 EALDLI-KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
           EA+D++ K     P+ ++W +LL AC+ H   D A  AAE++ E DP  SG +V+LSN+Y
Sbjct: 563 EAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVY 622

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
           A+AG W  V R+R  M+ +G++K PG SSIE+  +VHEF  GD SHP  + I + L  +N
Sbjct: 623 AAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLN 682

Query: 746 CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             +R AGY+PD   +L DV+++ K+ +L +HSE+LA+AFGLIST    P+RV+KNLR+C 
Sbjct: 683 SEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCS 742

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCH+  K +SK+  REI+VRD +RFH F+ G CSC D+W
Sbjct: 743 DCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 210/519 (40%), Gaps = 93/519 (17%)

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           KP++   V ++  C+  +N++ G RV  ++ + G + N L+   L+ MY +CG+V  A+Q
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F   + +++     ++  Y + G    AL +  +M      P +VT ++ ++A A    
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L  G   HG +L+ G EG   +   +I+MY KCG    A   F  + ++ VVSW ++IA 
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
            +                               Q + F  A  L+R M  + +  +++T+
Sbjct: 181 CV-------------------------------QHDQFALARWLYRRMQLDGVVPNKITL 209

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
             V +A G    L   K++Y  +    +  D+++  + V+MF   G    A ++F  M  
Sbjct: 210 YTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVD 269

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV------GVLTACSHGGLV 589
           RDV  W   I       N  +AV LF  + + G+K + I FV        LT+ + G ++
Sbjct: 270 RDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVI 329

Query: 590 N-----------------------------QGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           +                             Q W +F  M      S  ++ +  M     
Sbjct: 330 HELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMG-----SKDVITWTVMCVAYA 384

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSL---------LAACQK----HQNVDIAAYAAERI 667
           + G   EAL L + M +E       +L         LAA QK    H ++    +  E +
Sbjct: 385 QNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMV 444

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
            E           L N+Y   GK      V  +M ++ I
Sbjct: 445 VE---------TALINMYGKCGKMAEAMSVFEKMAKRDI 474


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 254/668 (38%), Positives = 394/668 (58%), Gaps = 31/668 (4%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           + +I+ Y     + +   VF  +    V++W S+I     + L   A+  F EM   G  
Sbjct: 43  SIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRC 102

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+      V+ +C  + +L  G+ V  +I  LGM  +    NAL++MY K   +D+ +++
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKV 162

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F     +++V  NT+++ Y + G+  +AL ++ EM     +PD  T+ S +   ++  D+
Sbjct: 163 FELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDV 222

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
           L G+  HGYV+R G++    I ++++DMY K  +                          
Sbjct: 223 LKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR-------------------------- 256

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
                +E +  VFS +  RD ISWN+++ G  Q   + EA+ LFR M+S +++   V   
Sbjct: 257 -----IEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFS 311

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V  AC +L  L L K ++ Y+ + G   ++ +A+ALVDM+++CG+ Q A ++F RM   
Sbjct: 312 SVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLH 371

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D  +WTA I   A+ G+G +AV LF EM RQG+KP+ + FV VLTACSH GLV++ W  F
Sbjct: 372 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 431

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
            SMT ++G++ ++ HY  + DLLGRAG L EA D I  M VEP   +W +LL++C  H+N
Sbjct: 432 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKN 491

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
           +++A   AE+I  +D E  G +VL+ N+YAS G+W  +A++RL+++++G+RK P  S IE
Sbjct: 492 LELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIE 551

Query: 717 VNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHH 776
           +  K H F SGD SHP M+ I+  L+ +  ++   GYV D + VL DVDE+ K+ LL  H
Sbjct: 552 MKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGH 611

Query: 777 SEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           SE+LA+AFG+I+T     IRV KN+R+C DCH   K +SK+ +REIIVRDN+RFH F +G
Sbjct: 612 SERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRG 671

Query: 837 SCSCSDFW 844
           SCSC D+W
Sbjct: 672 SCSCGDYW 679



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 246/519 (47%), Gaps = 46/519 (8%)

Query: 43  KTLNELKQPHCHILK-QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           K+ ++ KQ H   ++ Q L H  + I  V+     +          K  +        S 
Sbjct: 19  KSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLVFKTLE--------SP 68

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
            +  + S+IR ++   L   A++ +VE+   G  PD   FP VL +CT       G  VH
Sbjct: 69  PVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G IV++G D D++  N L+N Y +   I   R+VF+ M  ++VVS+ ++I   A+  + +
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYE 188

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           +A+ +  EM    +KP++ T+  V+   ++  ++  G  +  Y+   G+ ++  + ++LV
Sbjct: 189 DALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLV 248

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY K   ++ ++++F     R+ +  N++++ YV+ G   EAL +  +M+    RP  V
Sbjct: 249 DMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAV 308

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
              S + A A L  L  G+  HGYVLR G      I + ++DMY KCG  + A +IFD M
Sbjct: 309 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRM 368

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
           +    VSW ++I G                + G  H                 EA+ LF 
Sbjct: 369 NLHDEVSWTAIIMG--------------HALHGHGH-----------------EAVSLFE 397

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIY--AYIEKNGIHCDMQLATALVDMFAR 519
            M  + +K ++V  V V +AC ++G +D A W Y  +  +  G++ +++   A+ D+  R
Sbjct: 398 EMKRQGVKPNQVAFVAVLTACSHVGLVDEA-WGYFNSMTKVYGLNQELEHYAAVADLLGR 456

Query: 520 CGDPQRAMQVFRRMEKRDV-SAWTAAIGAMAMEGNGEQA 557
            G  + A     +M      S W+  + + ++  N E A
Sbjct: 457 AGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELA 495


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/791 (34%), Positives = 448/791 (56%), Gaps = 37/791 (4%)

Query: 58  QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
            G+  K   +S V    A +  +      ++A   +  ++     L  +NS+I G+S  G
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVF--EHMPERNLVSWNSIICGFSENG 181

Query: 118 LGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFV 175
              E+ + + E+       +PD  T   VL  C       +G+ VHG  VK+G + ++ V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241

Query: 176 ENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG- 234
            N LI+ Y +C  + + + +FD+  ++N+VSW S+I   AR +      YL  +M  E  
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301

Query: 235 -IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
            +K +  T++ V+  C +   L+    +  Y    G+++N L+ NA +  Y +CGA+ ++
Sbjct: 302 KMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSS 361

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           +++F     + +   N ++  Y +    R+AL +  +M   G  PD  T+ S + A +++
Sbjct: 362 ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 421

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
             L  G   HG+ LRNGL     I  +++ +Y+ CGK   A  +FD M ++++V      
Sbjct: 422 KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLV------ 475

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
                                    SWN M+ G +Q  + +EA+ LFR MLS+ I+   +
Sbjct: 476 -------------------------SWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEI 510

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
            ++ V  AC  L AL L K ++ +  K  +  D+ ++++++DM+A+ G    + ++F R+
Sbjct: 511 AIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRL 570

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
            ++DV++W   I    + G G++A+ELF +MLR G+KPD   F G+L ACSH GLV  G 
Sbjct: 571 REKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGL 630

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
             F  M ++H + P++ HY C+VD+LGRAG + +AL LI+ MP +P+  IW SLL++C+ 
Sbjct: 631 EYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRI 690

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H N+ +    A ++ EL+PEK   +VL+SN++A +GKW +V RVR +MK+ G++K  G S
Sbjct: 691 HGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCS 750

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            IEV GKVH F  GDE  PE+  +    R +  ++   GY PD  +VL D++E++K  +L
Sbjct: 751 WIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGIL 810

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
             HSEKLA++FGL++T+K +P+RV KNLR+C DCH+ AK +SKV +R+I+VRDN RFH F
Sbjct: 811 RGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHF 870

Query: 834 RQGSCSCSDFW 844
           R G CSC D+W
Sbjct: 871 RDGICSCGDYW 881



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 217/467 (46%), Gaps = 40/467 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           +L AC +      G ++H  +     F  D  +   +I  Y  CG   D R VFD++  +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRV 261
           N+  W +++ A  R +L ++A+ +F E++     KP++ T+ CVI ACA L +L LG  +
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
                ++ + ++  + NAL+ MY KCG V+ A ++F    +RNLV  N+I+  +   G  
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 322 REALAILDEMLLHGPR--PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           +E+     EML+      PD  T+++ +   A   D+  G   HG  ++ GL     + N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           ++IDMY KC     A  +FD    K +VSWNS+I G  +  DV     +  +M   D   
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTED--- 300

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                                      ++K D  T++ V   C     L   K ++ Y  
Sbjct: 301 --------------------------AKMKADEFTILNVLPVCLERSELQSLKELHGYSW 334

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           ++G+  +  +A A +  + RCG    + +VF  M+ + VS+W A +   A   +  +A++
Sbjct: 335 RHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALD 394

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
           L+ +M   G+ PD      +L ACS    ++ G        +IHG +
Sbjct: 395 LYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG-------EEIHGFA 434



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 13/178 (7%)

Query: 42  CKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           C  L+ L   K+ HC  LK  L       S ++   A+ G    +  +Q+ FD   + + 
Sbjct: 519 CSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC---IGLSQRIFDRLREKDV 575

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            S     +N +I GY   G G EA+ L+ ++   G+ PD FTF  +L AC+ +    +G+
Sbjct: 576 AS-----WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGL 630

Query: 159 QVHGAIVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEM-SERNVVSWTSLICAC 214
           +    ++ +   +  +    C+++  G  G I D  R+ +EM  + +   W+SL+ +C
Sbjct: 631 EYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSC 688


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 290/809 (35%), Positives = 441/809 (54%), Gaps = 48/809 (5%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L+ C+ L  ++Q H  I   G      ++   +      G   S+  A+ AFD   + N
Sbjct: 33  ALRQCQDLESVRQIHDRI--SGAASANVFLGNEIVRA--YGKCGSVASARAAFDAIARKN 88

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
           + S     + S++  Y+  G    A+ LY  +    + P+   +  VL AC    A  EG
Sbjct: 89  DYS-----WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEG 140

Query: 158 VQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
             +H  I    G   DV +EN L+  Y +CG + D +R+F+ MS R+V SW ++I A A+
Sbjct: 141 KAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQ 200

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
               +EA+ L+ +M    ++P+  T   V+SAC+ L  L+ G ++ A I   G + +  +
Sbjct: 201 SGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSL 257

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            NAL+ MY +C  +D A ++F     R++V  + +++ +    L  EA+    +M L G 
Sbjct: 258 QNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGV 317

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           RP+  T  S + A A +GDL  GR  H  +L NG +                        
Sbjct: 318 RPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYK------------------------ 353

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                   T+V+  +L+      G ++ AR +F ++  RD   W  ++GG +++      
Sbjct: 354 -------ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGV 406

Query: 457 MELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           +EL+R M  + ++   ++    V SAC  LGA   A+  ++ IE +G+  D  LAT+LV+
Sbjct: 407 LELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVN 466

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M++R G+ + A QVF +M  RD  AWT  I   A  G    A+ L+ EM  +G +P  + 
Sbjct: 467 MYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELT 526

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F+ VL ACSH GL  QG  LF S+   + + P I HY C++DLL RAG L +A +LI +M
Sbjct: 527 FMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAM 586

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           PVEPNDV W SLL A + H++V  A +AA +IT+LDP     +VLLSN++A  G    +A
Sbjct: 587 PVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMA 646

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
            VR  M  +G++K  GSS IEV  ++HEF  GD SHP    I + L+ ++ ++++AGYVP
Sbjct: 647 SVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVP 706

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           +   VL DV E+EK+ LL  HSEKLA+AFGLI+T+    +R+   LR+C DCHS  K +S
Sbjct: 707 ESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFIS 766

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +  REIIVRD++RFH FR G CSC D+W
Sbjct: 767 AIARREIIVRDSSRFHKFRDGQCSCGDYW 795


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/723 (36%), Positives = 418/723 (57%), Gaps = 71/723 (9%)

Query: 160 VHGAIVKMGFDRDVF-----VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           +H  ++K G     +     +E C+I+ + +   +     VF+ + E N++ W ++    
Sbjct: 52  IHAQMIKTGLHNTNYALSKLLELCVISPHFD--GLPYAISVFETIQEPNLLIWNTMFRGH 109

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A    P  A+ L+  M+  G+ PNS T   ++ +CAK +  + G ++  ++ +LG   + 
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169

Query: 275 LMVNALVDMYMKCGA-------------------------------VDTAKQLFGECKDR 303
            +  +L+ +Y++ G                                +++A++LF E   +
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           ++V  N ++S Y   G  +EAL +  EM+    RPD  TM++ VSA AQ G +  GR  H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
            ++  +G      I N+++D+Y KCG+ E AC                L  GL+      
Sbjct: 290 SWIDDHGFGSNLKIVNSLMDLYSKCGELETAC---------------GLFEGLLY----- 329

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
                      +D ISWNT++GG T  N+++EA+ LF+ ML    + + VTM+ +  AC 
Sbjct: 330 -----------KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACA 378

Query: 484 YLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           +LGA+D+ +WI+ YI+K          L T+L+DM+A+CGD + A QVF  +  + +S+W
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            A I   AM G  + A ++F+ M + GI+PD I FVG+L+ACS  G+++ G H+FR+MT 
Sbjct: 439 NAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQ 498

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            + ++P++ HYGCM+DLLG +GL  EA ++I +M +EP+ VIW SLL AC+   NV++  
Sbjct: 499 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGE 558

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
             A+ + +++PE  G +VLLSNIYA+AG+W  VA++R  + ++G++K+PG SSIE++  V
Sbjct: 559 SFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 618

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           HEF  GD+ HP    I  ML EM   L  AG+VPD + VL +++E+ K+  L HHSEKLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +AFGLIST     + +VKNLR+C +CH   KL+SK+Y REII RD  RFH FR G CSC+
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738

Query: 842 DFW 844
           D+W
Sbjct: 739 DYW 741



 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 188/579 (32%), Positives = 308/579 (53%), Gaps = 75/579 (12%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           ++ PS+  L NCKTL  L+  H  ++K GL +    +SK++  C     F+ L YA   F
Sbjct: 32  RNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVF 91

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           +   + N     L ++N++ RG++     V A+ LYV +   G+LP+ +TFPF+L +C K
Sbjct: 92  ETIQEPN-----LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           S AF EG Q+HG ++K+G+D D+FV   LI+ Y + G + D R+VFD    R+VVS+T+L
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTAL 206

Query: 211 ICACARR-----------DLP--------------------KEAVYLFFEMVEEGIKPNS 239
           I   A R           ++P                    KEA+ LF EM++  I+P+ 
Sbjct: 207 IKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDE 266

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            TMV V+SACA+  ++ELG +V ++ID+ G  +N  +VN+L+D+Y KCG ++TA  LF  
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEG 326

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              ++++  NT++  Y  + L +EAL +  EML  G RP+ VTMLS + A A LG +  G
Sbjct: 327 LLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIG 386

Query: 360 RMCHGYV---LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
           R  H Y+   L++      S+  ++IDMY KCG  E A ++F+ + +K++ SWN++I G 
Sbjct: 387 RWIHVYIDKRLKSATNA-SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
             +G  ++A ++FS M           +G                      I+ D +T V
Sbjct: 446 AMHGRADAAFDIFSRM---------RKIG----------------------IEPDDITFV 474

Query: 477 GVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME- 534
           G+ SAC   G LDL + I+  + ++  I   ++    ++D+    G  + A ++   ME 
Sbjct: 475 GLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEM 534

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           + D   W + + A  + GN E        +++  I+P++
Sbjct: 535 EPDGVIWCSLLKACKIRGNVELGESFAQNLIK--IEPEN 571



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 239/465 (51%), Gaps = 41/465 (8%)

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD---TAKQLFGE 299
           + ++  C  LQ+L L   + A + + G+      ++ L+++ +     D    A  +F  
Sbjct: 37  LSLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFET 93

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
            ++ NL++ NT+   +        AL +   M+  G  P+  T    + + A+      G
Sbjct: 94  IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           +  HG+VL+ G +    +  ++I +Y++ G+ E A ++FD   ++ VVS+ +LI G    
Sbjct: 154 QQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASR 213

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G +ESA+++F E+P +D +SWN M+ G  +   ++EA+ELF+ M+   I+ D  TMV V 
Sbjct: 214 GYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVV 273

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           SAC   G+++L + ++++I+ +G   ++++  +L+D++++CG+ + A  +F  +  +DV 
Sbjct: 274 SACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVI 333

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-W-HLF- 596
           +W   IG        ++A+ LF EMLR G +P+ +  + +L AC+H G ++ G W H++ 
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 597 --------------RSMTDI----------HGVSPQIVH-----YGCMV---DLLGRAGL 624
                          S+ D+          H V   I+H     +  M+    + GRA  
Sbjct: 394 DKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
             +    ++ + +EP+D+ +  LL+AC +   +D+  +    +T+
Sbjct: 454 AFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQ 498


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 255/691 (36%), Positives = 406/691 (58%), Gaps = 31/691 (4%)

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
           F +   +H  ++++  D+D ++ N ++    + G     + VF ++ E N+  W ++I  
Sbjct: 29  FNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRG 88

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
              +D   +A++L+  M   G  PN+ T+  V+ ACA+  ++ LG ++ + + + G   +
Sbjct: 89  LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD 148

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  +L+ +Y+KC   D A ++F +  D+N+V    I++ Y+  G  REA+    ++L 
Sbjct: 149 VFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLE 208

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G +PD  +++  ++A A+LGD   G     Y+  +G+     +  +++DMY+KCG    
Sbjct: 209 MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG---- 264

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                                      ++E A  +FS MP +D +SW+TM+ G     + 
Sbjct: 265 ---------------------------NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           ++A++LF  M SE +K D  TMVGV SAC  LGALDL  W  + +++N    +  L TAL
Sbjct: 298 QQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTAL 357

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +DM+++CG   +A ++F  M+K+D   W A +  ++M G+ +    LF+ + + GI+PD 
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDE 417

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
             F+G+L  C+HGG VN+G   F +M  +  ++P I HYGCMVDLLGRAGLL EA  LI 
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           +MP++PN V+WG+LL  C+ H++  +A    +++ EL+P  SG +V LSNIY+   +W  
Sbjct: 478 NMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEE 537

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
             ++R  MKEQ I+K+   S IE++G VHEF  GD+SH     I + L E+   L+  G+
Sbjct: 538 AEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGH 597

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VP    VL D++E+EK++ L +HSEKLA+AFGLI++     IRVVKNLR+C DCH   KL
Sbjct: 598 VPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKL 657

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +SK+  REII+RD NRFH F  GSCSC D+W
Sbjct: 658 ISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 261/524 (49%), Gaps = 41/524 (7%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
            N+LK  H  +L+  L  + +Y+  ++  CA    F S  Y++  F    + N     +F
Sbjct: 29  FNQLKHIHARLLRLHLD-QDNYLLNLILCCAL--DFGSTNYSKLVFSQVKEPN-----IF 80

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           ++N++IRG        +AI LY  + G G LP+ FT PFVL AC +      G+++H  +
Sbjct: 81  LWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLL 140

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           VK G+D DVFV+  L++ Y +C +  D  +VFD++ ++NVVSWT++I         +EA+
Sbjct: 141 VKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAI 200

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             F +++E G+KP+S ++V V++ACA+L +   G+ +  YI + GM  N  +  +L+DMY
Sbjct: 201 GAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMY 260

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           +KCG ++ A  +F    ++++V  +T++  Y   GL ++AL +  +M     +PD  TM+
Sbjct: 261 VKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMV 320

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
             +SA A LG L  G      + RN       +   +IDMY KCG    A  IF  M  K
Sbjct: 321 GVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKK 380

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
             V WN+++ GL  NG    A+ VFS                            LF ++ 
Sbjct: 381 DRVVWNAMMVGLSMNG---HAKAVFS----------------------------LFSLVE 409

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDP 523
              I+ D  T +G+   C + G ++  +  +  +++   +   ++    +VD+  R G  
Sbjct: 410 KHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLL 469

Query: 524 QRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             A Q+   M  K +   W A +G   +  +   A ++  +++ 
Sbjct: 470 NEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/688 (39%), Positives = 410/688 (59%), Gaps = 40/688 (5%)

Query: 195 VFDEMSERNVVSWTSL-ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           +FD M     +  T+L  C+ A  D P     LF  M   G++P+  T   +   C+   
Sbjct: 59  LFDRMPPSTFLFDTALRACSRAGSD-PHRPFLLFRRMRRAGVRPDGFTFHFLFK-CSSSS 116

Query: 254 NLELGDRVCAYIDELGMK-----ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV-- 306
           +      +C  +    ++     A   + N+L+ MY++ G    A++ F E   ++ V  
Sbjct: 117 SRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAW 176

Query: 307 ------------LCNT-----------------IMSNYVRLGLAREALAILDEMLLHGPR 337
                       LC+T                 +++ Y R   AREA+     ML HG  
Sbjct: 177 TMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIA 236

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD VT+++ +SA A+L DL  GR  H  V   G+   +++   +IDMY KCG    A ++
Sbjct: 237 PDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQV 296

Query: 398 FDHMSN-KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           FD +       SWN++I G  K+G V+ AR +F EM  RD I++N+M+ G        EA
Sbjct: 297 FDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREA 356

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + LF  M    ++VD  T+V + +AC  LGAL   + ++A IE+  +  D+ L TAL+DM
Sbjct: 357 LLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDM 416

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CG    A  VF+RM KRDV  WTA I  +A  G G+ A+E F +M   G +P+S+ +
Sbjct: 417 YMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSY 476

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           + VLTACSH  L+N+G   F  M  ++ + PQI HYGCM+DLLGR+GLL EA+DL+K+MP
Sbjct: 477 IAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMP 536

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           ++PN VIW S+L+AC+ H+++D+A  AAE + +L+P++ GV+V L NIY  + +W N ++
Sbjct: 537 IQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASK 596

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R+ M+E+ ++K  G SSI V G+VH+F   D+SHP +  I +ML E++ RL+  GY P 
Sbjct: 597 IRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPL 656

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
            + + +DVDE+EK+  L  HSEKLA+AFGLI+ +  +P+ + KNLR+C DCHS  KL+S+
Sbjct: 657 TSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISR 716

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +++REIIVRD +RFH FR+G+CSC+DFW
Sbjct: 717 LWNREIIVRDRSRFHHFREGTCSCNDFW 744



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 151/579 (26%), Positives = 249/579 (43%), Gaps = 112/579 (19%)

Query: 43  KTLNELKQPHCHILKQG--LGHKPS--YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +T+ +  + H  +   G  L H PS  ++   +  C +      L YA   FD       
Sbjct: 10  RTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLH-LRYALHLFD------R 62

Query: 99  TSATLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGILPDKFTFPFVLN---ACTKSSAF 154
              + F++++ +R  S  G        L+  +   G+ PD FTF F+     + ++  + 
Sbjct: 63  MPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSL 122

Query: 155 GEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-------------- 199
                +H A ++ M      FV N LI+ Y   G   D RR FDE+              
Sbjct: 123 LLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISG 182

Query: 200 -----------------SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
                              R+V+SWTSLI A +R +  +EAV  F  M+  GI P+ VT+
Sbjct: 183 LAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTV 242

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC--------------- 287
           + V+SACAKL++LELG  +   ++E GM  +  +V AL+DMY KC               
Sbjct: 243 IAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGR 302

Query: 288 -----------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
                            G VD A+ LF E + R+++  N++M+ Y+  G  REAL +   
Sbjct: 303 GPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMS 362

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M  H  R D  T+++ ++A A LG L  GR  H  + +  +E    +   ++DMYMKCG+
Sbjct: 363 MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGR 422

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            + A  +F  M  + V +W ++IAGL  NG                              
Sbjct: 423 VDEATIVFQRMGKRDVHTWTAMIAGLAFNG------------------------------ 452

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQL 509
            M + A+E F  M  +  + + V+ + V +AC +   L+  +  +  +     IH  ++ 
Sbjct: 453 -MGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEH 511

Query: 510 ATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              ++D+  R G    AM + + M  + +   W + + A
Sbjct: 512 YGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSA 550


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/725 (38%), Positives = 418/725 (57%), Gaps = 75/725 (10%)

Query: 160 VHGAIVKMGFDRDVF-----VENCLI--NFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
           +H  ++K G     +     +E C++  NF G    I     VF+ + E N++ W ++  
Sbjct: 21  IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAI----SVFETIQEPNLLIWNTMFR 76

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             A    P  A+ L+  M+  G+ PNS T   ++ +CAKL+  + G ++  ++ +LG + 
Sbjct: 77  GHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYEL 136

Query: 273 NALMVNALVDMYMKCGA-------------------------------VDTAKQLFGECK 301
           +  +  +L+ MY+K G                                +++A+++F E  
Sbjct: 137 DLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIP 196

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
            +++V  N I+S Y   G  +EAL +  EM+    +PD  TM++ VSA AQ G +  GR 
Sbjct: 197 VKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQ 256

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H ++  +GL     I N +ID+Y KCG                               +
Sbjct: 257 VHSWIDDHGLGSNLKIVNALIDLYSKCG-------------------------------E 285

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           VE+A  +F  +  +D ISWNTM+GG T  N+++EA+ LF+ ML      + VTM+ +  A
Sbjct: 286 VETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPA 345

Query: 482 CGYLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           C  LGA+D  +WI+ YI+K   G+     L T+L+DM+A+CGD + A QVF  M  R +S
Sbjct: 346 CAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLS 405

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
           A  A I   AM G    A ++F+ M + GI+PD I FVG+L+ACSH G+++ G  +FRSM
Sbjct: 406 ACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSM 465

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
           T  + ++P++ HYGCM+DLLG  GL  EA ++I +M +EP+ VIW SLL AC+ H NV++
Sbjct: 466 TQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVEL 525

Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
               A+++ +++PE  G +VLLSNIYA+AG+W  VA +R  + ++G++K+PG SSIE++ 
Sbjct: 526 GESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDS 585

Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEK 779
            VHEF  GD+ HP    I  ML EM   L +AG+VPD + VL +++E+ K+  L HHSEK
Sbjct: 586 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEK 645

Query: 780 LAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCS 839
           LA+AFGLIST     + +VKNLR+C +CH   KL+SK+Y REII RD  RFH FR G CS
Sbjct: 646 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 705

Query: 840 CSDFW 844
           C+D+W
Sbjct: 706 CNDYW 710



 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 184/578 (31%), Positives = 303/578 (52%), Gaps = 73/578 (12%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           ++ PS+  L NCKTL  L+  H  ++K GL +    +S+++  C     F+ L YA   F
Sbjct: 1   RNHPSLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVF 60

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           +   + N     L ++N++ RG++     V AI LYV +   G+LP+ +TFPF+L +C K
Sbjct: 61  ETIQEPN-----LLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
                EG Q+HG ++K+G++ D++V   LI+ Y + G   D  +VFD  S R+VVS+T+L
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175

Query: 211 ICACARR-----------DLP--------------------KEAVYLFFEMVEEGIKPNS 239
           I   A R           ++P                    KEA+ LF EM++  +KP+ 
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            TMV V+SACA+  +++LG +V ++ID+ G+ +N  +VNAL+D+Y KCG V+TA  LF  
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
             +++++  NT++  Y  L L +EAL +  EML  G  P+ VTMLS + A AQLG +  G
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355

Query: 360 RMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
           R  H Y+ +   G+    S+  ++IDMY KCG  E A ++F+ M ++T+ + N++I G  
Sbjct: 356 RWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFA 415

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
            +G   +A ++FS M                                   I+ D +T VG
Sbjct: 416 MHGRANAAFDIFSRMR-------------------------------KNGIEPDDITFVG 444

Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-K 535
           + SAC + G LDL + I+  + +N  I   ++    ++D+    G  + A ++   M  +
Sbjct: 445 LLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTME 504

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            D   W + + A  M GN E       ++++  I+P++
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESFAQKLIK--IEPEN 540


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 258/651 (39%), Positives = 389/651 (59%), Gaps = 40/651 (6%)

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           NV SW S+I   AR     EA+  F  M +  +KPN  T  C I +C+ L +L  G +  
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                 G + +  + +ALVDMY KCG +  A+ LF E   RN+V   ++++ YV+   A 
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235

Query: 323 EALAILDEMLLHGPRP--------DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
            AL +  E L+             D + M+S +SA +++ +       HG++++ G EG 
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + NT++D Y KCG+  ++ R+FD M+ + V+SWNS+IA   +NG              
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNG-------------- 341

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKW 493
                            M  E+ME+F  M+ +  I  + VT+  V  AC + G+  L K 
Sbjct: 342 -----------------MSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKC 384

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+  + K G+  ++ + T+++DM+ +CG  + A + F RM +++V +W+A +    M G+
Sbjct: 385 IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGH 444

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
            ++A+E+F EM   G+KP+ I FV VL ACSH GL+ +GWH F++M+    V P + HYG
Sbjct: 445 AKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYG 504

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVDLLGRAG L EA DLIK M + P+ V+WG+LL AC+ H+NVD+   +A ++ ELDP+
Sbjct: 505 CMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPK 564

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G +VLLSNIYA AG+W +V R+R+ MK  G+ K PG S +++ G+VH F  GD  HP+
Sbjct: 565 NCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQ 624

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I   L +++ +L++ GYVPD+T+VL DV  +EK+ +L  HSEKLA+AFG+++T    
Sbjct: 625 HEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGT 684

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            I ++KNLR+C DCH+  K +SK+ DREI+VRD+ RFH FR G CSC D+W
Sbjct: 685 TIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 235/475 (49%), Gaps = 46/475 (9%)

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F+ Y+        +F +NS+I   +  G  VEA+  +  +    + P++ TFP  + +C+
Sbjct: 108 FNKYVD----KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCS 163

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
                  G Q H   +  GF+ D+FV + L++ Y +CG++ D R +FDE+S RN+VSWTS
Sbjct: 164 ALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTS 223

Query: 210 LICACARRDLPKEAVYLFFE-MVEEG-------IKPNSVTMVCVISACAKLQNLELGDRV 261
           +I    + D    A+ LF E +VEE        +  + + MV V+SAC+++    + + V
Sbjct: 224 MITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGV 283

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
             ++ + G + +  + N L+D Y KCG +  ++++F    +R+++  N+I++ Y + G++
Sbjct: 284 HGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMS 343

Query: 322 REALAILDEMLLHGPRPDRVTMLSAV-SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            E++ I   M+  G        LSAV  A A  G    G+  H  V++ GLE    +  +
Sbjct: 344 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS 403

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMY KCGK EMA + FD M  K V SW++++AG   +G  + A EVF EM        
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM-------- 455

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIE 499
             M G                      +K + +T V V +AC + G L+    W  A   
Sbjct: 456 -NMAG----------------------VKPNYITFVSVLAACSHAGLLEEGWHWFKAMSH 492

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAMAMEGN 553
           +  +   ++    +VD+  R G  + A  + + M+ R D   W A +GA  M  N
Sbjct: 493 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKN 547


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 279/770 (36%), Positives = 433/770 (56%), Gaps = 45/770 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+  FD   K       + ++N LIR Y+  G   EAI LY ++ G+GI P++FTFP
Sbjct: 67  LKIARHVFD---KMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFP 123

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           FVL AC+      EG ++H  I ++  + +V+V   L++FY +CG + D + VFD+M +R
Sbjct: 124 FVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKR 183

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           +VV+W S+I   +  +   + V      ++  + PNS T+V V+ A A++ +L  G  + 
Sbjct: 184 DVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIH 243

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD-RNLVLCNTIMSNYVRLGLA 321
            +    G   + ++   ++D+Y KC  +D A+++F      +N V  + ++  YV     
Sbjct: 244 GFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFM 303

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSAS------AQLGDLLCGRMCHGYVLRNGLEGWD 375
           REAL +  ++L+     D V +LSAV+ +      A L DL  G   H Y +++G     
Sbjct: 304 REALELFCQLLM---LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDL 360

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + NT++ MY KCG    A R F+ M  +  VS+ ++I+G ++NG+ E    +F EM   
Sbjct: 361 MVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEM--- 417

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                   L G+  E                     + T+  V  AC +L  L      +
Sbjct: 418 -------QLSGINPE---------------------KATLASVLPACAHLAGLHYGSCSH 449

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
            Y    G   D  +  AL+DM+A+CG    A +VF RM KR + +W   I A  + G G 
Sbjct: 450 CYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGL 509

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+ LF+ M  +G+KPD + F+ +++ACSH GLV +G + F +MT   G+ P++ HY CM
Sbjct: 510 EALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACM 569

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLL RAGL  E    I+ MP+EP+  +WG+LL+AC+ ++NV++    +++I +L PE +
Sbjct: 570 VDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPEST 629

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD-ESHPEM 734
           G  VLLSN+Y++ G+W + A+VR   KEQG  K PG S IE++G VH F  G   SHP++
Sbjct: 630 GNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQL 689

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
             IS+ L E+   ++  GY  + + V  DV+E+EK+ +L +HSEKLA+AFG++S S    
Sbjct: 690 TQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKH 749

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           I V KNLR+C DCH+  K +S V  R+I VRD +RFH F+ G C+C DFW
Sbjct: 750 IIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 259/572 (45%), Gaps = 77/572 (13%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGF--------DRDVFVENCLINFYGECGDIVDGRRV 195
           +L +C +S +   G  +H  ++K           + DV  E  L++ Y  C ++   R V
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEK-LVDLYIACSELKIARHV 73

Query: 196 FDEMSER--NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           FD+M  R  NVV W  LI A A     +EA+ L+++M+  GI PN  T   V+ AC+ L+
Sbjct: 74  FDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALK 133

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
               G  +   I  L +++N  +  ALVD Y KCG +D AK++F +   R++V  N+++S
Sbjct: 134 EASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMIS 193

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            +     + + +A L   + +   P+  T++  + A AQ+  L  G+  HG+ +R G  G
Sbjct: 194 GFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG 253

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              +   ++D+Y KC   + A RIFD M             G++KN              
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMM-------------GIVKN-------------- 286

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVML---SERIKVDRVTMVGVASACGYLGALDL 490
               ++W+ M+G     +   EA+ELF  +L    + I +  VT+  V   C  L  L  
Sbjct: 287 ---EVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLST 343

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
              ++ Y  K+G   D+ +   L+ M+A+CG    AM+ F  M+ RD  ++TA I     
Sbjct: 344 GTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQ 403

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG--WHLF------------ 596
            GN E+ + +F EM   GI P+      VL AC+H   ++ G   H +            
Sbjct: 404 NGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMI 463

Query: 597 -RSMTDIHGVSPQ---------------IVHYGCMVDLLGRAGLLGEALDLIKSMPVE-- 638
             ++ D++    +               IV +  M+   G  G+  EAL L  +M  E  
Sbjct: 464 CNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGL 523

Query: 639 -PNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            P+DV +  L++AC     V    Y    +T+
Sbjct: 524 KPDDVTFICLISACSHSGLVAEGKYWFNAMTQ 555



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 164/348 (47%), Gaps = 21/348 (6%)

Query: 17  VTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCT 73
           V  L  Q +   +P  S  +G L     +N L   K+ H   +++G      ++  VV  
Sbjct: 205 VARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRG------FVGDVVVG 258

Query: 74  CAQM---GTFESLTYAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
              +   G  + + YA++ FD   I  NE +     +++++  Y       EA+ L+ +L
Sbjct: 259 TGILDVYGKCQCIDYARRIFDMMGIVKNEVT-----WSAMVGAYVVCDFMREALELFCQL 313

Query: 130 AGFG---ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
                  I+    T   V+  C   +    G  +H   +K GF  D+ V N L++ Y +C
Sbjct: 314 LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKC 373

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G I    R F+EM  R+ VS+T++I    +    +E + +F EM   GI P   T+  V+
Sbjct: 374 GIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVL 433

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            ACA L  L  G     Y    G  A+ ++ NAL+DMY KCG +DTA+++F     R +V
Sbjct: 434 PACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIV 493

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
             NT++  Y   G+  EAL + D M   G +PD VT +  +SA +  G
Sbjct: 494 SWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSG 541


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/724 (37%), Positives = 413/724 (57%), Gaps = 31/724 (4%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           EAI + +     G++ D F +  VL  C K        QVH  I+K   +++  V N L+
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           + Y ECG + + R VFD + +++  SW ++I         ++A+ LF EM  EG++PN+ 
Sbjct: 71  HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T + ++ ACA L  L+ G  V A I   G++++  +  AL+ MY KCG+++ A+++F   
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            + +++    ++  Y + G  +EA  ++ +M   G +P+ +T +S ++A A  G L   +
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H + L  GLE    +   ++ MY K                               +G
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAK-------------------------------SG 279

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
            ++ AR VF  M  RD +SWN M+G   +     EA +LF  M +E  K D +  + + +
Sbjct: 280 SIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILN 339

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC   GAL+  K I+ +   +G+  D+++ TALV M+++ G    A  VF RM+ R+V +
Sbjct: 340 ACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVS 399

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W A I  +A  G G+ A+E+F  M   G+KPD + FV VL+ACSH GLV++G   + +MT
Sbjct: 400 WNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMT 459

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            ++G+ P + H  CMVDLLGRAG L EA   I +M V+P++  WG+LL +C+ + NV++ 
Sbjct: 460 QVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELG 519

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
              A+   +LDP+ +  +VLLSNIYA AGKW  V+ VR  M+E+GIRK PG S IEV+ K
Sbjct: 520 ELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNK 579

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           +H+F   D SHPE   I+    ++  +++  GY+PD   VL + + ++K+  +  HSEKL
Sbjct: 580 IHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKL 639

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+ +GL+ T    PIRV KNLR+C DCH   KL+SKV  REIIVRD NRFH F+ G CSC
Sbjct: 640 AIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSC 699

Query: 841 SDFW 844
            D+W
Sbjct: 700 GDYW 703



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 212/450 (47%), Gaps = 27/450 (6%)

Query: 33  SPSIGS----LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
            P+ G+    LK C +L+ LK   + H  I   GL    S +          G   S+  
Sbjct: 126 QPNAGTYMIILKACASLSALKWGKEVHACIRHGGL---ESDVRVGTALLRMYGKCGSINE 182

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD     N  +  +  +  +I  Y+  G G EA  L +++   G  P+  T+  +L
Sbjct: 183 ARRIFD-----NLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSIL 237

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           NAC    A     +VH   +  G + DV V   L+  Y + G I D R VFD M  R+VV
Sbjct: 238 NACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVV 297

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW  +I A A      EA  LF +M  EG KP+++  + +++ACA    LE   ++  + 
Sbjct: 298 SWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHA 357

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            + G++ +  +  ALV MY K G++D A+ +F   K RN+V  N ++S   + GL ++AL
Sbjct: 358 LDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDAL 417

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNT 380
            +   M  HG +PDRVT ++ +SA +  G +  GR     M   Y    G+E   S CN 
Sbjct: 418 EVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVY----GIEPDVSHCNC 473

Query: 381 MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           M+D+  + G+   A    D+M+ +    +W +L+      G+VE    V  E    D  +
Sbjct: 474 MVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKN 533

Query: 440 WNT--MLGGLTQENMFEEAMELFRVMLSER 467
             T  +L  +  E    + +   R M+ ER
Sbjct: 534 AATYVLLSNIYAEAGKWDMVSWVRTMMRER 563



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 40/289 (13%)

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
           N   EA+ +    L   +  D    V V   C     L  AK ++  I K+ +  +  + 
Sbjct: 7   NTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM 66

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
             L+ ++  CG  Q A  VF  + K+  ++W A I       + E A+ LF EM  +G++
Sbjct: 67  NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126

Query: 571 PDSIVFVGVLTACS----------------HGGL---VNQGWHLFR------SMTDIHGV 605
           P++  ++ +L AC+                HGGL   V  G  L R      S+ +   +
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186

Query: 606 -----SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQKHQNV 657
                +  I+ +  M+    ++G   EA  L+  M  E   PN + + S+L AC     +
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246

Query: 658 D----IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
                +  +A +   ELD     V   L  +YA +G   +   V  +MK
Sbjct: 247 KWVKRVHRHALDAGLELDVR---VGTALVQMYAKSGSIDDARVVFDRMK 292


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/627 (41%), Positives = 380/627 (60%), Gaps = 33/627 (5%)

Query: 220 PKEAVYLFFEMVE--EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           P++A++LF EM+        +  T  C + +C+++  L++G  V AY  + G+ A+  ++
Sbjct: 99  PEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVL 158

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           ++L+ MY  CG V  A+ +F   ++  +V+ N I++ Y++ G   E + +   ML  G  
Sbjct: 159 SSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVA 218

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            D VT++S V+A  ++GD   G+   G+V   GL     +   ++DMY KCG        
Sbjct: 219 FDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCG-------- 270

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                  ++  AR +F  M  RD ++W+ M+ G TQ +   EA+
Sbjct: 271 -----------------------EIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREAL 307

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF  M   R++ + VTMV V SAC  LGAL+  KW+++Y+ +  +     L TALVD +
Sbjct: 308 GLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFY 367

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG    A++ F  M  ++   WTA I  MA  G G +A+ELF+ M   GI+P  + F+
Sbjct: 368 AKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFI 427

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           GVL ACSH  LV +G   F SM   +G+ P++ HYGCMVDLLGRAGL+ EA   I++MP+
Sbjct: 428 GVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPI 487

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           EPN VIW +LL++C  H+NV I   A ++I  L+P  SG +VLLSNIYASAG+W + A V
Sbjct: 488 EPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMV 547

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R +MK++GI K PG S IE++G V EF + D  HPE+  I   + EM  R++ AGYVP+ 
Sbjct: 548 RKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNT 607

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
            +V L+V+E+EK+  +SHHSEKLA+AFGL+       IR+ KNLR+C DCHS  KL+SKV
Sbjct: 608 ADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKV 667

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
           YDREI+VRD N FH F+ G+CSC+D+W
Sbjct: 668 YDREIVVRDRNIFHHFKDGTCSCNDYW 694



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 242/521 (46%), Gaps = 59/521 (11%)

Query: 64  PSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMY----------------- 106
           PSY+ ++     + G    LT + K+F   ++    S TL  Y                 
Sbjct: 29  PSYLPQLHAALIKSG---ELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPC 85

Query: 107 -NSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
            N L+R +   G   +A+ L++E+  A      D+ T    L +C++  A   G  V   
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
            VK G   D FV + LI+ Y  CGD+   R VFD   E  VV W +++ A  +     E 
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           V +F  M+E G+  + VT+V V++AC ++ + +LG  V  ++DE G+  N  +V AL+DM
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG +  A++LF   + R++V  + ++S Y +    REAL +  EM L    P+ VTM
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S +SA A LG L  G+  H YV R  L     +   ++D Y KCG  + A   F+ M  
Sbjct: 326 VSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV 385

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K   +W +LI G+  NG             GR                   EA+ELF  M
Sbjct: 386 KNSWTWTALIKGMATNGR------------GR-------------------EALELFSSM 414

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGD 522
               I+   VT +GV  AC +   ++  +  +  + ++ GI   ++    +VD+  R G 
Sbjct: 415 REAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGL 474

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
              A Q  R M  + +   W A + + A+  N   GE+A++
Sbjct: 475 VDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALK 515



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 189/419 (45%), Gaps = 22/419 (5%)

Query: 24  HKAKTTPKDSPSIG-SLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGT 79
           H A   P D  +   +LK+C  +  L   +    + +K+GL      +S ++   A  G 
Sbjct: 111 HAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCG- 169

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
              +  A+  FD         + + M+N+++  Y   G  +E + ++  +   G+  D+ 
Sbjct: 170 --DVAAARLVFD-----AAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEV 222

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   V+ AC +      G  V G + + G  R+  +   L++ Y +CG+I   RR+FD M
Sbjct: 223 TLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGM 282

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             R+VV+W+++I    + D  +EA+ LF EM    ++PN VTMV V+SACA L  LE G 
Sbjct: 283 QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGK 342

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            V +Y+    +    ++  ALVD Y KCG +D A + F     +N      ++      G
Sbjct: 343 WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 402

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGW 374
             REAL +   M   G  P  VT +  + A +    +  GR     M   Y ++  +E +
Sbjct: 403 RGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHY 462

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
                 M+D+  + G  + A +    M      V W +L++    + +V    E   ++
Sbjct: 463 ----GCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQI 517



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 35/247 (14%)

Query: 440 WNTMLGGLTQENMFEEAMELFRVML--SERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           +N ++         E+A+ LF  ML  +     D+ T      +C  + ALD+ + + AY
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             K G+  D  + ++L+ M+A CGD   A  VF   E+  V  W A + A    G+  + 
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-W--------------HLFRSMTDI 602
           VE+F  ML  G+  D +  V V+TAC   G    G W               L  ++ D+
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265

Query: 603 HG---------------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIW 644
           +                 S  +V +  M+    +A    EAL L   M    VEPNDV  
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325

Query: 645 GSLLAAC 651
            S+L+AC
Sbjct: 326 VSVLSAC 332



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 113/288 (39%), Gaps = 55/288 (19%)

Query: 26  AKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES 82
           A+  P D   +  L  C  L  L   K  H ++ ++ L       + +V   A+ G  + 
Sbjct: 316 ARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDD 375

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
              A +AF+     N      + + +LI+G +  G G EA+ L+  +   GI P   TF 
Sbjct: 376 ---AVEAFESMPVKNS-----WTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFI 427

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-- 200
            VL AC+ S                          CL+          +GRR FD M+  
Sbjct: 428 GVLMACSHS--------------------------CLVE---------EGRRHFDSMARD 452

Query: 201 ---ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
              +  V  +  ++    R  L  EA Y F   +   I+PN+V    ++S+CA  +N+ +
Sbjct: 453 YGIKPRVEHYGCMVDLLGRAGLVDEA-YQFIRTMP--IEPNAVIWRALLSSCAVHRNVGI 509

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           G+     I  L    +   V  L ++Y   G    A  +  E KDR +
Sbjct: 510 GEEALKQIISLNPSHSGDYV-LLSNIYASAGQWKDAAMVRKEMKDRGI 556


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/743 (36%), Positives = 421/743 (56%), Gaps = 10/743 (1%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +  +I GY  I    +   ++  +   G  PD+  F  VL+A T     G    +  
Sbjct: 188 LVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRP 247

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVD-GRRVFDEMSERNVVSWTSLICACARRDLPK 221
            ++K GF+ DV +   ++N Y      +D   + FD M ERN  +W+++I A +      
Sbjct: 248 LVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRID 307

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            A+ ++     + I P+   ++  ++ C ++    +       + E       +  NA++
Sbjct: 308 AAIAVYGRDPVKSI-PSQTALLTGLARCGRITEARI-------LFEQIPDPIVVSWNAMI 359

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
             YM+ G VD AK+LF     RN +    +++ Y + G + EAL +L  +  +G  P   
Sbjct: 360 TGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLS 419

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           ++ S+  A + +G L  GR  H   ++ G +    +CN +I MY KC   E   ++F+ M
Sbjct: 420 SLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRM 479

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             K  VSWNS IA L++N  +E AR +F  M  RD +SW T++    Q    +EA+E F+
Sbjct: 480 RVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFK 539

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            ML E  K +   +  + S CG LG+  L + I+    K+G+  ++ +A AL+ M+ +CG
Sbjct: 540 TMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG 599

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
               + +VF  ME+RD+  W   I   A  G G +A++++  M   G+ P+ + FVG+L 
Sbjct: 600 CAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLN 658

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV++GW  F+SM+  +G++P + HY CMVDLLGR G +  A   I  MP+EP+ 
Sbjct: 659 ACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDT 718

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           VIW +LL AC+ H+N +I   AAE++   +P  +G +V+LSNIY+S G W  VA +R  M
Sbjct: 719 VIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIM 778

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           K++G+ K PG S +++  KVH F +GD+ H ++  I   L+++   LR  GYVPD   VL
Sbjct: 779 KQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVL 838

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            D+DE++K+  L +HSEKLA+A+GL+ T K MPI+++KNLR+C DCH+F K VS V  R+
Sbjct: 839 HDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRD 898

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I +RD NRFH FR GSCSC DFW
Sbjct: 899 IDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 154/669 (23%), Positives = 282/669 (42%), Gaps = 106/669 (15%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELKQ-----PHCHILKQGLGHKPSYISKVVCTCAQMG 78
           H+A      S  I  L     L E ++     PH  I+        ++ S +   C   G
Sbjct: 28  HRALDKSAHSARIRELARLGRLREAREVFDAMPHRDII--------AWNSMISAYCNS-G 78

Query: 79  TFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
             E    A+  FD     N  +AT+     L+ GY+ +G  ++A  +      F  +P++
Sbjct: 79  MLED---ARILFDAISGGNVRTATI-----LLSGYARLGRVLDARRV------FDGMPER 124

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
            T  +  NA          + +   +      RDV   N ++  Y     +VD   +F +
Sbjct: 125 NTVAW--NAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQ 182

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M +RN+V+WT +I    R +   +   +F  M  EG  P+      V+SA   LQ+L + 
Sbjct: 183 MPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVL 242

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMK-CGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           + +   + + G +++ ++  +++++Y +   A+D A + F    +RN    +T+++    
Sbjct: 243 EVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSH 302

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
            G    A+A+      +G  P +    S  S +A L  L                     
Sbjct: 303 GGRIDAAIAV------YGRDPVK----SIPSQTALLTGL--------------------- 331

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
                    +CG+   A  +F+ + +  VVSWN++I G ++NG V+ A+E+F  MP R+ 
Sbjct: 332 --------ARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNT 383

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           ISW  M+ G  Q    EEA++L + +    +     ++     AC ++GAL+  + +++ 
Sbjct: 384 ISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSL 443

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME----------------------- 534
             K G   +  +  AL+ M+ +C + +   QVF RM                        
Sbjct: 444 AVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDA 503

Query: 535 --------KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
                    RDV +WT  I A A    G++AVE F  ML +  KP+S +   +L+ C   
Sbjct: 504 RHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGL 563

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WG 645
           G    G  +  ++   HG+  +++    ++ +  + G   ++  +  SM  E  D+  W 
Sbjct: 564 GSAKLGQQI-HTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSM--EERDIFTWN 619

Query: 646 SLLAACQKH 654
           + +  C +H
Sbjct: 620 TFITGCAQH 628



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           +I DN  S  +  + ++I  Y+    G EA+  +  +      P+      +L+ C    
Sbjct: 505 HIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLG 564

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
           +   G Q+H   +K G D ++ V N L++ Y +CG   D  +VFD M ER++ +W + I 
Sbjct: 565 SAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFIT 623

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
            CA+  L +EA+ ++  M   G+ PN VT V +++AC+
Sbjct: 624 GCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACS 661



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC 148
           A  + + D+     +F +N+ I G +  GLG EAI +Y  +   G+LP++ TF  +LNAC
Sbjct: 601 ADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNAC 660

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRR-VFDEMSERNVV 205
           + +    EG Q   ++ +  +     +E+  C+++  G  GD+    + ++D   E + V
Sbjct: 661 SHAGLVDEGWQFFKSMSR-DYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTV 719

Query: 206 SWTSLICAC 214
            W++L+ AC
Sbjct: 720 IWSALLGAC 728



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 13/155 (8%)

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D    +A +   AR G  + A +VF  M  RD+ AW + I A    G  E A  LF+ + 
Sbjct: 32  DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
              ++  +I    +L+  +  G V     +F  M + + V+     +  MV    + G +
Sbjct: 92  GGNVRTATI----LLSGYARLGRVLDARRVFDGMPERNTVA-----WNAMVSCYVQNGDI 142

Query: 626 GEALDLIKSMPVEPNDVI-WGSLLAA-CQKHQNVD 658
             A  L  +MP    DV  W S++   C   Q VD
Sbjct: 143 TMARRLFDAMP--SRDVTSWNSMVTGYCHSRQMVD 175


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 254/691 (36%), Positives = 406/691 (58%), Gaps = 31/691 (4%)

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
           F +   +H  ++++  D+D ++ N ++    + G     + VF ++ E N+  W ++I  
Sbjct: 29  FNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRG 88

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
              +D   +A++L+  M   G  PN+ T+  V+ ACA+  ++ LG ++ + + + G   +
Sbjct: 89  LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD 148

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  +L+ +Y+KC   D A ++F +  D+N+V    I++ Y+  G  REA+    ++L 
Sbjct: 149 VFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLE 208

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G +PD  +++  ++A A+LGD   G     Y+  +G+     +  +++DMY+KCG    
Sbjct: 209 MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG---- 264

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                                      ++E A  +FS MP +D +SW+TM+ G     + 
Sbjct: 265 ---------------------------NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           ++A++LF  M SE +K D  TMVGV SAC  LGALDL  W  + +++N    +  L TAL
Sbjct: 298 QQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTAL 357

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +DM+++CG   +A ++F  M+++D   W A +  ++M G+ +    LF+ + + GI+PD 
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDE 417

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
             F+G+L  C+HGG VN+G   F +M  +  ++P I HYGCMVDLLGRAGLL EA  LI 
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           +MP++PN V+WG+LL  C+ H++  +A    +++ EL+P  SG +V LSNIY+   +W  
Sbjct: 478 NMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEE 537

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
             ++R  MKEQ I+K+   S IE++G VHEF  GD+SH     I + L E+   L+  G+
Sbjct: 538 AEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGH 597

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VP    VL D++E+EK++ L +HSEKLA+AFGLI++     IRVVKNLR+C DCH   KL
Sbjct: 598 VPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKL 657

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +SK+  REII+RD NRFH F  GSCSC D+W
Sbjct: 658 ISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 261/524 (49%), Gaps = 41/524 (7%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
            N+LK  H  +L+  L  + +Y+  ++  CA    F S  Y++  F    + N     +F
Sbjct: 29  FNQLKHIHARLLRLHLD-QDNYLLNLILCCAL--DFGSTNYSKLVFSQVKEPN-----IF 80

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           ++N++IRG        +AI LY  + G G LP+ FT PFVL AC +      G+++H  +
Sbjct: 81  LWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLL 140

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           VK G+D DVFV+  L++ Y +C +  D  +VFD++ ++NVVSWT++I         +EA+
Sbjct: 141 VKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAI 200

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             F +++E G+KP+S ++V V++ACA+L +   G+ +  YI + GM  N  +  +L+DMY
Sbjct: 201 GAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMY 260

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           +KCG ++ A  +F    ++++V  +T++  Y   GL ++AL +  +M     +PD  TM+
Sbjct: 261 VKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMV 320

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
             +SA A LG L  G      + RN       +   +IDMY KCG    A  IF  M  K
Sbjct: 321 GVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRK 380

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
             V WN+++ GL  NG    A+ VFS                            LF ++ 
Sbjct: 381 DRVVWNAMMVGLSMNG---HAKAVFS----------------------------LFSLVE 409

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDP 523
              I+ D  T +G+   C + G ++  +  +  +++   +   ++    +VD+  R G  
Sbjct: 410 KHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLL 469

Query: 524 QRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             A Q+   M  K +   W A +G   +  +   A ++  +++ 
Sbjct: 470 NEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/723 (37%), Positives = 418/723 (57%), Gaps = 71/723 (9%)

Query: 160 VHGAIVKMGFDRDVF-----VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           +H  ++K+G     +     +E C+++ + E   +     VF  + E N++ W ++    
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKTIQEPNLLIWNTMFRGH 109

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A    P  A+ L+  M+  G+ PNS T   V+ +CAK +  + G ++  ++ +LG   + 
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169

Query: 275 LMVNALVDMYMKCGA-------------------------------VDTAKQLFGECKDR 303
            +  +L+ MY++ G                                ++ A++LF E   +
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           ++V  N ++S Y   G  +EAL +  +M+    RPD  TM++ VSA AQ G +  GR  H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
            ++  +G      I N +ID+Y KCG                               ++E
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCG-------------------------------ELE 318

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
           +A  +F  +P +D ISWNT++GG T  N+++EA+ LF+ ML      + VTM+ +  AC 
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378

Query: 484 YLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           +LGA+D+ +WI+ YI+K   G+     L T+L+DM+A+CGD + A QVF  +  + +S+W
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            A I   AM G  + + +LF+ M + GI+PD I FVG+L+ACSH G+++ G H+FR+MT 
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            + ++P++ HYGCM+DLLG +GL  EA ++I  M +EP+ VIW SLL AC+ H NV++  
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
             AE + +++PE  G +VLLSNIYASAG+W  VA+ R  + ++G++K+PG SSIE++  V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           HEF  GD+ HP    I  ML EM   L  AG+VPD + VL +++E+ K+  L HHSEKLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +AFGLIST     + +VKNLR+C +CH   KL+SK+Y REII RD  RFH FR G CSC+
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738

Query: 842 DFW 844
           D+W
Sbjct: 739 DYW 741



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 186/578 (32%), Positives = 303/578 (52%), Gaps = 73/578 (12%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           ++ PS+  L NCKTL  L+  H  ++K GL +    +SK++  C     FE L YA   F
Sbjct: 32  RNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVF 91

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
               + N     L ++N++ RG++     V A+ LYV +   G+LP+ +TFPFVL +C K
Sbjct: 92  KTIQEPN-----LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           S AF EG Q+HG ++K+G D D++V   LI+ Y + G + D  +VFD+   R+VVS+T+L
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206

Query: 211 ICACARR-----------DLP--------------------KEAVYLFFEMVEEGIKPNS 239
           I   A R           ++P                    KEA+ LF +M++  ++P+ 
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            TMV V+SACA+  ++ELG +V  +ID+ G  +N  +VNAL+D+Y KCG ++TA  LF  
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              ++++  NT++  Y  + L +EAL +  EML  G  P+ VTMLS + A A LG +  G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386

Query: 360 RMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
           R  H Y+ +   G+    S+  ++IDMY KCG  E A ++F+ + +K++ SWN++I G  
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
            +G  +++ ++FS M           +G                      I+ D +T VG
Sbjct: 447 MHGRADASFDLFSRM---------RKIG----------------------IQPDDITFVG 475

Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG-DPQRAMQVFRRMEK 535
           + SAC + G LDL + I+  + ++  +   ++    ++D+    G   +    +     +
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME 535

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            D   W + + A  M GN E   E F E L + I+P++
Sbjct: 536 PDGVIWCSLLKACKMHGNVELG-ESFAENLIK-IEPEN 571


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 288/795 (36%), Positives = 434/795 (54%), Gaps = 38/795 (4%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H   +  G G      + +V   A  G F  +  A++ F+    D+E +A    +N L
Sbjct: 121 QVHAMAMATGFGSDVFVANALV---AMYGGFGFMDDARRVFNE--ADSERNAV--SWNGL 173

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           +  Y       +AI ++ E+   GI P +F F  V+NACT S     G QVH  +V+MG+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGY 233

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           D+DVF  N L++ Y + G +     +F++M + +VVSW +LI  C        A+ L  +
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M   G+ PN  T+  ++ AC+     +LG ++  ++ +    ++  +   LVDMY K   
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A+++F     R+L+LCN ++S     G   EAL++  E+   G   +R T+ + + +
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           +A L      R  H   ++ G      + N +ID Y KC     +C              
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKC-----SC-------------- 454

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                       +  A  VF E    D I+  +M+  L+Q +  E A++LF  ML + ++
Sbjct: 455 ------------LSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +  + +AC  L A +  K ++A++ K     D     ALV  +A+CG  + A   
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 562

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + +R V +W+A IG +A  G+G++A+ELF  M+ +GI P+ I    VL AC+H GLV
Sbjct: 563 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 622

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++    F SM ++ G+     HY CM+DLLGRAG L +A++L+ SMP + N  IWG+LL 
Sbjct: 623 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           A + H++ ++   AAE++  L+PEKSG HVLL+N YASAG W  VA+VR  MK+  I+K 
Sbjct: 683 ASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKE 742

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           P  S IEV  KVH F  GD+SHP    I + L E+   +  AG+VP++   L D+D  EK
Sbjct: 743 PAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEK 802

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + LLSHHSE+LA+AF L+ST    PIRV KNLR+C DCH   K +SK+  REII+RD NR
Sbjct: 803 ELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINR 862

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR G+CSC D+W
Sbjct: 863 FHHFRDGTCSCGDYW 877



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 177/589 (30%), Positives = 272/589 (46%), Gaps = 68/589 (11%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           ++SL+  YS  GL   AI  +  +   G+  ++F  P VL  C   +    G QVH   +
Sbjct: 71  WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GAQVHAMAM 127

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-SERNVVSWTSLICACARRDLPKEAV 224
             GF  DVFV N L+  YG  G + D RRVF+E  SERN VSW  L+ A  + D   +A+
Sbjct: 128 ATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAI 187

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            +F EMV  GI+P      CV++AC   +N+E G +V A +  +G   +    NALVDMY
Sbjct: 188 QVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMY 247

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           MK G VD A  +F +  D ++V  N ++S  V  G    A+ +L +M   G  P+  T+ 
Sbjct: 248 MKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A +  G    GR  HG++++   +  D I   ++DMY K    + A ++FD M ++
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            ++  N+LI+G    G                                 +EA+ LF  + 
Sbjct: 368 DLILCNALISGCSHGG-------------------------------RHDEALSLFYELR 396

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
            E + V+R T+  V  +   L A    + ++A   K G   D  +   L+D + +C    
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLS 456

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A +VF      D+ A T+ I A++   +GE A++LF EMLR+G++PD  V   +L AC+
Sbjct: 457 DANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACA 516

Query: 585 HGGLVNQG----WHLFRS--MTDIHGVS----------------------PQ--IVHYGC 614
                 QG     HL +   M+D    +                      P+  +V +  
Sbjct: 517 SLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSA 576

Query: 615 MVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIA 660
           M+  L + G    AL+L   M    + PN +   S+L AC     VD A
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 202/435 (46%), Gaps = 37/435 (8%)

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           + A   G  +H +++K G        N LI+FY +C      RRVFDE+ +   VSW+SL
Sbjct: 17  AQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSL 74

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           + A +   LP+ A+  F  M  EG+  N   +  V+     + +  LG +V A     G 
Sbjct: 75  VTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGF 131

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILD 329
            ++  + NALV MY   G +D A+++F E   +RN V  N +MS YV+     +A+ +  
Sbjct: 132 GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFG 191

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           EM+  G +P        V+A     ++  GR  H  V+R G +      N ++DMYMK G
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMG 251

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           + ++A  IF+ M +  VVSWN+LI+G + N              G DH            
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLN--------------GHDH------------ 285

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
                 A+EL   M    +  +  T+  +  AC   GA DL + I+ ++ K     D  +
Sbjct: 286 -----RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
              LVDM+A+      A +VF  M  RD+    A I   +  G  ++A+ LF E+ ++G+
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400

Query: 570 KPDSIVFVGVLTACS 584
             +      VL + +
Sbjct: 401 GVNRTTLAAVLKSTA 415


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 288/795 (36%), Positives = 434/795 (54%), Gaps = 38/795 (4%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H   +  G G      + +V   A  G F  +  A++ F+    D+E +A    +N L
Sbjct: 121 QVHAMAMATGFGSDVFVANALV---AMYGGFGFMDDARRVFNE--ADSERNAV--SWNGL 173

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           +  Y       +AI ++ E+   GI P +F F  V+NACT S     G QVH  +V+MG+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGY 233

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           D+DVF  N L++ Y + G +     +F++M + +VVSW +LI  C        A+ L  +
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M   G+ PN  T+  ++ AC+     +LG ++  ++ +    ++  +   LVDMY K   
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A+++F     R+L+LCN ++S     G   EAL++  E+   G   +R T+ + + +
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           +A L      R  H   ++ G      + N +ID Y KC     +C              
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKC-----SC-------------- 454

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                       +  A  VF E    D I+  +M+  L+Q +  E A++LF  ML + ++
Sbjct: 455 ------------LSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +  + +AC  L A +  K ++A++ K     D     ALV  +A+CG  + A   
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 562

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + +R V +W+A IG +A  G+G++A+ELF  M+ +GI P+ I    VL AC+H GLV
Sbjct: 563 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 622

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++    F SM ++ G+     HY CM+DLLGRAG L +A++L+ SMP + N  IWG+LL 
Sbjct: 623 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           A + H++ ++   AAE++  L+PEKSG HVLL+N YASAG W  VA+VR  MK+  I+K 
Sbjct: 683 ASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKE 742

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           P  S IEV  KVH F  GD+SHP    I + L E+   +  AG+VP++   L D+D  EK
Sbjct: 743 PAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEK 802

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + LLSHHSE+LA+AF L+ST    PIRV KNLR+C DCH   K +SK+  REII+RD NR
Sbjct: 803 ELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINR 862

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR G+CSC D+W
Sbjct: 863 FHHFRDGTCSCGDYW 877



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 177/589 (30%), Positives = 272/589 (46%), Gaps = 68/589 (11%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           ++SL+  YS  GL   AI  +  +   G+  ++F  P VL  C   +    G QVH   +
Sbjct: 71  WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GAQVHAMAM 127

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-SERNVVSWTSLICACARRDLPKEAV 224
             GF  DVFV N L+  YG  G + D RRVF+E  SERN VSW  L+ A  + D   +A+
Sbjct: 128 ATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAI 187

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            +F EMV  GI+P      CV++AC   +N+E G +V A +  +G   +    NALVDMY
Sbjct: 188 QVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMY 247

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           MK G VD A  +F +  D ++V  N ++S  V  G    A+ +L +M   G  P+  T+ 
Sbjct: 248 MKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A +  G    GR  HG++++   +  D I   ++DMY K    + A ++FD M ++
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            ++  N+LI+G    G                                 +EA+ LF  + 
Sbjct: 368 DLILCNALISGCSHGG-------------------------------RHDEALSLFYELR 396

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
            E + V+R T+  V  +   L A    + ++A   K G   D  +   L+D + +C    
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLS 456

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A +VF      D+ A T+ I A++   +GE A++LF EMLR+G++PD  V   +L AC+
Sbjct: 457 DANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACA 516

Query: 585 HGGLVNQG----WHLFRS--MTDIHGVS----------------------PQ--IVHYGC 614
                 QG     HL +   M+D    +                      P+  +V +  
Sbjct: 517 SLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSA 576

Query: 615 MVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIA 660
           M+  L + G    AL+L   M    + PN +   S+L AC     VD A
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 201/435 (46%), Gaps = 37/435 (8%)

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           + A   G  +H +++K G        N LI+FY +C      RR FDE+ +   VSW+SL
Sbjct: 17  AQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSL 74

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           + A +   LP+ A+  F  M  EG+  N   +  V+     + +  LG +V A     G 
Sbjct: 75  VTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGF 131

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILD 329
            ++  + NALV MY   G +D A+++F E   +RN V  N +MS YV+     +A+ +  
Sbjct: 132 GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFG 191

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           EM+  G +P        V+A     ++  GR  H  V+R G +      N ++DMYMK G
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMG 251

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           + ++A  IF+ M +  VVSWN+LI+G + N              G DH            
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLN--------------GHDH------------ 285

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
                 A+EL   M    +  +  T+  +  AC   GA DL + I+ ++ K     D  +
Sbjct: 286 -----RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
              LVDM+A+      A +VF  M  RD+    A I   +  G  ++A+ LF E+ ++G+
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400

Query: 570 KPDSIVFVGVLTACS 584
             +      VL + +
Sbjct: 401 GVNRTTLAAVLKSTA 415


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 282/828 (34%), Positives = 468/828 (56%), Gaps = 50/828 (6%)

Query: 17  VTTLTNQHKAKTTP--KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           + +++  +K+ TT   KD+       +C  +N  K+ H  +L  G        +K++   
Sbjct: 5   LKSVSKFYKSATTSLHKDADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLY 64

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS----LYVELA 130
              G    ++ ++  FDY  K N     +F +NS+I  Y   G   EA++    L+    
Sbjct: 65  VTHG---DISLSRSTFDYIHKKN-----IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCG 116

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G  + PD +TFP +L AC    +  +G +VH  + KMGF+ DVFV   L++ Y   G + 
Sbjct: 117 GGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLD 173

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
              +VF +M  ++V SW ++I    +      A+ +   M  EG+K +++T+  ++  CA
Sbjct: 174 VAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCA 233

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
           +  ++  G  +  ++ + G+ ++  + NAL++MY K G +  A+ +F + + R+LV  N+
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           I++ Y +      AL     M L G RPD +T++S  S  +QL D    R   G+V+R  
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRRE 353

Query: 371 LEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
               D +  N +++MY K G   M C                             A  VF
Sbjct: 354 WLDKDVVIGNALVNMYAKLGY--MNC-----------------------------AHTVF 382

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-DRVTMVGVASACGYLGAL 488
            ++P +D ISWNT++ G TQ  +  EA++ + +M   R  + ++ T V +  A  ++GAL
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
                I+A + KN ++ D+ +AT L+D++ +CG  + AM +F  + +     W A I ++
Sbjct: 443 QQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASL 502

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
            + G GE+A++LF +ML + +K D I FV +L+ACSH GLV++G   F  M   +G+ P 
Sbjct: 503 GIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPS 562

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
           + HYGCMVDLLGRAG L +A +L+++MP++P+  IWG+LL+AC+ + N ++   A++R+ 
Sbjct: 563 LKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           E+D E  G +VLLSNIYA+  KW  V +VR   +++G+RK PG SS+ V  K   F +G+
Sbjct: 623 EVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGN 682

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           ++HP+   I   L+ ++ +++  GYVPD + V  D++E EK+ +L+ HSE+LA+AFG+IS
Sbjct: 683 QTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIIS 742

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           T    PIR+ KNLR+C DCH+  K +S++ +REI+VRD+NRFH F+ G
Sbjct: 743 TPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 264/739 (35%), Positives = 428/739 (57%), Gaps = 33/739 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NSLI GY   G   +A+ +Y +    G++PD FT   VL AC    A  EGV VHG I 
Sbjct: 190 WNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G   DV + N L++ Y +   + + RRVF +M+ ++ V+W ++IC  A+    + +V 
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF +M++ G  P+ +++   I AC +  +L++G  V  Y+   G + + +  N L+DMY 
Sbjct: 310 LFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +  A+++F   K ++ V  N++++ Y + G  +E L    +M+    +PD VT + 
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVL 427

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +S  +QL D+  GR  H  V++ G E    I N+++D+Y KCG                
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG---------------- 471

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                          +++   +VFS M   D ISWNT++      +      ++   M +
Sbjct: 472 ---------------EMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRT 516

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E +  D  T++G+   C  L      K I+ YI K+G   ++ +  AL++M+++CG  + 
Sbjct: 517 EGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLEN 576

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
            ++VF+ M+++DV  WTA I A  M G G++A++ F +M   G+ PDS+ F+  + ACSH
Sbjct: 577 CIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSH 636

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G+V +G   F  M   + + P++ HY C+VDLL R+GLL +A + I SMP++P+  +WG
Sbjct: 637 SGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWG 696

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL+AC+   N +IA   +++I EL+ + +G +VL+SNIYA+ GKW  V  VR  MK +G
Sbjct: 697 ALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKG 756

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K PGSS IE+  +V+ F +GD+S  + + +  +L  +   +   GYV DL   L DV+
Sbjct: 757 LKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVE 816

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E +K+ +L  HSE+LA+AFGL++T    P+ V+KNLR+C DCH+  K ++K+  REI+VR
Sbjct: 817 EDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVR 876

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH F+ G+CSC D W
Sbjct: 877 DANRFHRFKDGACSCGDHW 895



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 169/622 (27%), Positives = 299/622 (48%), Gaps = 50/622 (8%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           S  + +L + K   +L+  H  I+  GL     +  K++   AQ+    S     ++   
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSI-- 80

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
                  +  ++++NS+IR  +  GL  +A+  Y E+    + PD FTFP V+N+C +  
Sbjct: 81  -----SPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARIL 135

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G  VH   ++MGF+ D+++ N LI+ Y    D+ + R VF+EMS R+ VSW SLI 
Sbjct: 136 DLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLIS 195

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
                   ++A+ ++ +    G+ P+  TM  V+ AC  L  ++ G  V   I+++G+  
Sbjct: 196 GYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAG 255

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           + ++ N L+ MY K   +  A+++F +   ++ V  NT++  Y +LG    ++ +  +M 
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM- 314

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           + G  PD +++ S + A  Q GDL  G+  H Y++ +G E     CN +IDMY KCG   
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLL 374

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +FD    K  V+WNSLI                                G TQ   
Sbjct: 375 AAQEVFDTTKCKDSVTWNSLI-------------------------------NGYTQSGY 403

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           ++E +E F++M  ER K D VT V + S    L  ++  + I+  + K G   ++ +  +
Sbjct: 404 YKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNS 462

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+D++A+CG+    ++VF  M   D+ +W   I +     +     ++ NEM  +G+ PD
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPD 522

Query: 573 SIVFVGVLTACSHGGLVNQG----WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
               +G+L  CS   +  QG     ++F+S     G    +     ++++  + G L   
Sbjct: 523 EATVLGILPMCSLLAVRRQGKEIHGYIFKS-----GFESNVPIGNALIEMYSKCGSLENC 577

Query: 629 LDLIKSMPVEPNDVIWGSLLAA 650
           + + K M  E + V W +L++A
Sbjct: 578 IKVFKYMK-EKDVVTWTALISA 598


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/626 (40%), Positives = 383/626 (61%), Gaps = 32/626 (5%)

Query: 220 PKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           P++A++LF EM++   + P+  T+ C + +C+++  L++G  + AY  + G+ A+  +++
Sbjct: 99  PEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLS 158

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L+ MY  C  V  A+ LF   ++  +V+ N I++ Y++ G   E + +   ML  G   
Sbjct: 159 SLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAF 218

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D +T++S V+A  ++GD   G+    YV   GL    ++   +IDMY KCG         
Sbjct: 219 DEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCG--------- 269

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                 ++  AR +F  M  RD ++W+ M+ G TQ +   EA+ 
Sbjct: 270 ----------------------ELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALA 307

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF  M    ++ + VTMV V SAC  LGAL+  KW+++YI +  +   + L TALVD +A
Sbjct: 308 LFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYA 367

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A++ F  M  ++   WTA I  MA  G G +A+ELF+ M +  I+P  + F+G
Sbjct: 368 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIG 427

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL ACSH  LV +G   F SMT  +G+ P+  HYGC+VDLLGRAGL+ EA   I++MP+E
Sbjct: 428 VLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE 487

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           PN VIW +LL++C  H+NV+I   A ++I  L+P  SG ++LLSNIYAS G+W N A +R
Sbjct: 488 PNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIR 547

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
            +MK++GI K PG S IE++G V EF + D  HP++  I   + EM  R++ AGY+P+  
Sbjct: 548 KEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTA 607

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
           +V L+VDE EK+  +SHHSEKLA+AFGL+       IR+ KNLR+C DCHS  KL+SKVY
Sbjct: 608 DVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVY 667

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
           +REI+VRD NRFH F+ G+CSC+D+W
Sbjct: 668 NREIVVRDRNRFHHFKDGTCSCNDYW 693



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 243/524 (46%), Gaps = 44/524 (8%)

Query: 48  LKQPHCHILKQG-LGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMY 106
           L Q H  ++K G L   P     ++   A   T   L YA   F    +   ++     Y
Sbjct: 32  LPQLHAALIKSGELTGSPKCFHSLLEAAAASPTL--LPYAVSLFRLGPRPPLSTPC---Y 86

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           N L+R     G   +A+ L+VE+     + PD+ T    L +C++      G  +    V
Sbjct: 87  NVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAV 146

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K G   D FV + LI+ Y  C D+   + +FD + E  VV W ++I A  +     E V 
Sbjct: 147 KRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVE 206

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F  M+E G+  + +T+V V++AC ++ + +LG  V  Y+DE G+  N  ++ AL+DMY 
Sbjct: 207 MFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYA 266

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +  A++LF   + R++V  + ++S Y +    REALA+  EM L    P+ VTM+S
Sbjct: 267 KCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVS 326

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +SA A LG L  G+  H Y+ R  L     +   ++D Y KCG  + A   F+ M  K 
Sbjct: 327 VLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKN 386

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
             +W +LI G+  NG             GR                   EA+ELF  M  
Sbjct: 387 SWTWTALIKGMATNGR------------GR-------------------EALELFSSMRK 415

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQ 524
             I+   VT +GV  AC +   ++  +  +  + ++ GI    +    +VD+  R G   
Sbjct: 416 ASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLID 475

Query: 525 RAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            A Q  R M  + +   W A + + A+  N    VE+  E L+Q
Sbjct: 476 EAYQFIRTMPIEPNAVIWRALLSSCAVHKN----VEIGEEALKQ 515



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 188/416 (45%), Gaps = 21/416 (5%)

Query: 26  AKTTPKDSPSIGSLKNCK---TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES 82
           A   P       +LK+C    TL+  +    + +K+GL      +S ++   A   +   
Sbjct: 113 ASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYA---SCRD 169

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           +  AQ  FD  +++N     + M+N++I  Y   G  +E + ++  +   G+  D+ T  
Sbjct: 170 VAAAQLLFDA-VEEN----GVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLV 224

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            V+ AC +      G  V   + + G  R+  +   LI+ Y +CG++   RR+FD M  R
Sbjct: 225 SVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSR 284

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           +VV+W+++I    + D  +EA+ LF EM    ++PN VTMV V+SACA L  LE G  V 
Sbjct: 285 DVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVH 344

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           +YI    +    ++  ALVD Y KCG +D A + F     +N      ++      G  R
Sbjct: 345 SYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGR 404

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSI 377
           EAL +   M      P  VT +  + A +    +  GR     M   Y ++   E +  +
Sbjct: 405 EALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCV 464

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               +D+  + G  + A +    M      V W +L++    + +VE   E   ++
Sbjct: 465 ----VDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQI 516



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 15/273 (5%)

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +N ++  L      E+A+ LF  ML    +  D+ T+     +C  +  LD+ + I AY 
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K G+  D  + ++L+ M+A C D   A  +F  +E+  V  W A I A    GN  + V
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVHYGCMVD 617
           E+F  ML  G+  D I  V V+TAC   G    G W       D  G+         ++D
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKW--VAEYVDEKGLVRNRNLMTALID 263

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVD--IAAYAAERITELDPEK 674
           +  + G LG+A  L   M  +  DV+ W ++++   +       +A ++  ++ E++P  
Sbjct: 264 MYAKCGELGKARRLFDGM--QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPND 321

Query: 675 SGVHVLLSNIYA----SAGKWTN--VARVRLQM 701
             +  +LS          GKW +  + R RL +
Sbjct: 322 VTMVSVLSACAVLGALETGKWVHSYIRRKRLSL 354



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 101/278 (36%), Gaps = 69/278 (24%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D   S  +  ++++I GY+      EA++L+ E+    + P+  T   VL+AC    A  
Sbjct: 279 DGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALE 338

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS--------------- 200
            G  VH  I +      + +   L++FY +CG I D    F+ M                
Sbjct: 339 TGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMA 398

Query: 201 --------------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKP-- 237
                               E   V++  ++ AC+   L +E    F  M ++ GIKP  
Sbjct: 399 TNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRA 458

Query: 238 ------------------------------NSVTMVCVISACAKLQNLELGDRVCAYIDE 267
                                         N+V    ++S+CA  +N+E+G+     I  
Sbjct: 459 EHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVS 518

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           L    +   +  L ++Y   G    A  +  E KDR +
Sbjct: 519 LNPSHSGDYI-LLSNIYASVGQWKNAAMIRKEMKDRGI 555


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/831 (32%), Positives = 451/831 (54%), Gaps = 45/831 (5%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCA 75
           TV++ T +  A    K++  +   K   +++ L Q H  I+  G  +  S ++K+    +
Sbjct: 5   TVSSATAETTAALISKNT-YLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLS 63

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGI 134
            +G   ++ YA+  F    + +     +F++N L+RG+S       ++S++  L     +
Sbjct: 64  DLG---AIYYARDIFLSVQRPD-----VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDL 115

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
            P+  T+ F ++A +       G  +HG  V  G D ++ + + ++  Y +   + D R+
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQ 253
           VFD M E++ + W ++I    + ++  E++ +F +++ E   + ++ T++ ++ A A+LQ
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            L LG ++ +   + G  ++  ++   + +Y KCG +     LF E +  ++V  N ++ 
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y   G    +L++  E++L G R    T++S V  S   G L+     HGY L++    
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLS 352

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
             S+   +  +Y K                                 ++ESAR++F E P
Sbjct: 353 HASVSTALTTVYSKLN-------------------------------EIESARKLFDESP 381

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
            +   SWN M+ G TQ  + E+A+ LFR M       + VT+  + SAC  LGAL L KW
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++  +        + ++TAL+ M+A+CG    A ++F  M K++   W   I    + G 
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G++A+ +F EML  GI P  + F+ VL ACSH GLV +G  +F SM   +G  P + HY 
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVD+LGRAG L  AL  I++M +EP   +W +LL AC+ H++ ++A   +E++ ELDP+
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G HVLLSNI+++   +   A VR   K++ + K PG + IE+    H FTSGD+SHP+
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
           +  I   L ++  ++R+AGY P+    L DV+E+E++ ++  HSE+LA+AFGLI+T    
Sbjct: 682 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 741

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            IR++KNLR+C DCH+  KL+SK+ +R I+VRD NRFH F+ G CSC D+W
Sbjct: 742 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 287/771 (37%), Positives = 432/771 (56%), Gaps = 48/771 (6%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           ++SL  A K FD     N  S     + +LI+GYS      EAI L+  L G G   + F
Sbjct: 92  YDSLPDAAKLFDEMPDRNTVS-----FVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPF 146

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
            F  VL     +     G  VH  + K+GFD D FV   LI+ Y  CG     R+VFD +
Sbjct: 147 VFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI 206

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             +++VSWT ++      +  +E++ LF  M   G KPN+ T   V+ AC  L+   +G 
Sbjct: 207 EYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGK 266

Query: 260 RV--CA----YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            V  CA    Y++EL +         L+D+Y+K G VD A Q+F E    +++  + +++
Sbjct: 267 AVHGCAFKTSYLEELFVGVE------LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIA 320

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y +   + EA+ +   M      P++ T+ S + A A L DL  G   H +V++ GL+ 
Sbjct: 321 RYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDM 380

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + N ++DMY KCG+ E                 NSL              ++FSE P
Sbjct: 381 NVFVSNALMDMYAKCGRME-----------------NSL--------------QLFSESP 409

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
               +SWNT++ G  Q    E+A+ LF+ ML  +++   VT   V  AC  + AL+    
Sbjct: 410 NCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQ 469

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I++   K     +  +  AL+DM+A+CG+ + A  VF  + + D  +W A I   ++ G 
Sbjct: 470 IHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGL 529

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
             +A++ F  ML    KPD + FVG+L+ACS+ GL+++G   F+SM + + + P   HY 
Sbjct: 530 YGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYT 589

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMV LLGR+G L +A  L+  +P EP+ ++W +LL+AC  H +V++   +A+R+ E++PE
Sbjct: 590 CMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPE 649

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
               HVLLSNIYA+A +W NVA +R  MK +GIRK PG S IE  G+VH F+ GD SHP+
Sbjct: 650 DEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPD 709

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I+ ML  +N + R+ GYVPD ++VLLDV++ +K+  L  HSE+LA+A+GLI T    
Sbjct: 710 TKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSIS 769

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           P+R++KNLR+C DCH+  KL+SK+  R+II+RD NRFH F +G CSC D+W
Sbjct: 770 PLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 247/546 (45%), Gaps = 47/546 (8%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           + + +  +L +C ++     G  +H  I+K G   D+F  N L+NFY +   + D  ++F
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           DEM +RN VS+ +LI   ++     EA+ LF  +  EG + N      V+      +  +
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
           LG  V A + +LG  ++A +  AL+D Y  CG  + A+Q+F   + +++V    +++ YV
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYV 222

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
                 E+L +   M + G +P+  T  S + A   L     G+  HG   +        
Sbjct: 223 ENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELF 282

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +   +ID+Y+K G  + A ++F+ M    V+ W+ +IA   ++   E A E+F  M    
Sbjct: 283 VGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR--- 339

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                    GL   N F                    T+  +  AC  L  L L   I+ 
Sbjct: 340 --------RGLVLPNQF--------------------TLASLLQACASLVDLQLGNQIHC 371

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           ++ K G+  ++ ++ AL+DM+A+CG  + ++Q+F         +W   I      GNGE+
Sbjct: 372 HVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEK 431

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY---- 612
           A+ LF +ML   ++   + +  VL AC+    +  G       + IH +S + ++     
Sbjct: 432 ALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPG-------SQIHSLSVKTIYDKNTV 484

Query: 613 --GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI--T 668
               ++D+  + G + +A  L+  M  E + V W ++++    H     A    E +  T
Sbjct: 485 VGNALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLET 543

Query: 669 ELDPEK 674
           E  P+K
Sbjct: 544 ECKPDK 549



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 185/390 (47%), Gaps = 22/390 (5%)

Query: 55  ILKQGLGHKPSYISKVVCTCA-QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL---- 109
           +LK  +G +   + K V  CA +    E L    +  D YIK  +    L ++  +    
Sbjct: 252 VLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDD 311

Query: 110 -------IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
                  I  Y+      EAI ++  +    +LP++FT   +L AC        G Q+H 
Sbjct: 312 VIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHC 371

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +VK+G D +VFV N L++ Y +CG + +  ++F E      VSW ++I    +    ++
Sbjct: 372 HVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEK 431

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+ LF +M+E  ++   VT   V+ ACA +  LE G ++ +   +     N ++ NAL+D
Sbjct: 432 ALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALID 491

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG +  A+ +F   ++ + V  N ++S Y   GL  EAL   + ML    +PD+VT
Sbjct: 492 MYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVT 551

Query: 343 MLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            +  +SA +  G L  G+     M   Y +    E +      M+ +  + G  + A ++
Sbjct: 552 FVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHY----TCMVWLLGRSGHLDKAAKL 607

Query: 398 FDHMS-NKTVVSWNSLIAGLIKNGDVESAR 426
              +    +V+ W +L++  + + DVE  R
Sbjct: 608 VHEIPFEPSVMVWRALLSACVIHNDVELGR 637


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/709 (36%), Positives = 420/709 (59%), Gaps = 35/709 (4%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           +  F  N +++ Y + G +    +VFD +  R+ VSWT++I    +    ++A+ +F +M
Sbjct: 39  KTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDM 98

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY------ 284
           V++ + P   T+  V+++CA   +  +G +V +++ +LG+ A   + N+L++MY      
Sbjct: 99  VKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDL 158

Query: 285 -------------------------MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
                                    M CG VD A   F    +R++V  N++++   + G
Sbjct: 159 KMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHG 218

Query: 320 LAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
              EAL     +L     +PDR ++ SA+SA A L  L  G+  HGY++R   +   ++ 
Sbjct: 219 FDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVG 278

Query: 379 NTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           N +I MY K G  E+A RI +   +S+  V+++ +L+ G +K GD+  AR++F+ +   D
Sbjct: 279 NALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPD 338

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            ++W  M+ G  Q  +  +A+E+F+ M+SE  + +  T+  + SA   + +L+  K I+A
Sbjct: 339 VVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHA 398

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGE 555
              ++G      +  AL  M+A+ G    A +VF  + + RD  +WT+ I A+A  G GE
Sbjct: 399 SAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGE 458

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+ELF +ML  GIKPD I +VGVL+AC+HGGLV QG   F  M ++H + P + HY CM
Sbjct: 459 EAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACM 518

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDL GRAGLL EA   +++MP+EP+ + WGSLL++C+ ++NVD+A  AAER+  ++P  S
Sbjct: 519 VDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNS 578

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G +  L+N+Y+S GKW + A++R  MK +G++K  G S +++  K H F   D  HP+ +
Sbjct: 579 GAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKD 638

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            I  M+ ++   ++  G+ PD  +VL D++ + K  +L +HSEKLA+AFG+IST +   +
Sbjct: 639 EIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTL 698

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R++KNLR+C DCH+  K +SK+ DREIIVRD  RFH F+ GSCSC D+W
Sbjct: 699 RIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 239/541 (44%), Gaps = 109/541 (20%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++   A+ G  E    A + FD     +  S     + ++I GY+ +G   +AI ++V++
Sbjct: 47  ILSGYAKQGKLEK---AHQVFDLIPVRDSVS-----WTTIIVGYNQMGRFEDAIKIFVDM 98

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
               +LP +FT   VL +C  + + G G +VH  +VK+G    V V N L+N Y + GD+
Sbjct: 99  VKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDL 158

Query: 190 VDGRRVFDEM-------------------------------SERNVVSWTSLICACARRD 218
              + VFD M                               SER++VSW S+I  C +  
Sbjct: 159 KMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHG 218

Query: 219 LPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
              EA+  F  ++++  +KP+  ++   +SACA L+ L  G ++  YI      A+  + 
Sbjct: 219 FDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVG 278

Query: 278 NALVDMYMKCGAVDT---------------------------------AKQLFGECKDRN 304
           NAL+ MY K G V+                                  A+Q+F   KD +
Sbjct: 279 NALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPD 338

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +V    ++  YV+ GL  +A+ +   M+  GPRP+  T+ + +SAS+ +  L  G+  H 
Sbjct: 339 VVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHA 398

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM-SNKTVVSWNSLIAGLIKNGDVE 423
             +R+G     S+ N +  MY K G    A ++F+ +  N+  VSW S+I  L ++G  E
Sbjct: 399 SAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGE 458

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
            A E+F +                               ML+  IK D +T VGV SAC 
Sbjct: 459 EAIELFEQ-------------------------------MLTLGIKPDHITYVGVLSACT 487

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLA--TALVDMFARCGDPQRAMQVFRRME-KRDVSA 540
           + G ++  +  Y  + KN    D  L+    +VD+F R G  Q A +    M  + DV A
Sbjct: 488 HGGLVEQGR-SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIA 546

Query: 541 W 541
           W
Sbjct: 547 W 547



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 170/358 (47%), Gaps = 43/358 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           +NS+I G +  G   EA+  +   L    + PD+F+    L+AC        G Q+HG I
Sbjct: 207 WNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYI 266

Query: 165 VKMGFDR---------------------------------DVFVENCLINFYGECGDIVD 191
           V+  FD                                  DV     L+N Y + GDI  
Sbjct: 267 VRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITP 326

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R++F+ + + +VV+WT++I    +  L  +A+ +F  MV EG +PNS T+  ++SA + 
Sbjct: 327 ARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSS 386

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK-DRNLVLCNT 310
           + +L  G ++ A     G   +  + NAL  MY K G+++ A+++F   + +R+ V   +
Sbjct: 387 VTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTS 446

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++    + GL  EA+ + ++ML  G +PD +T +  +SA    G +  GR    + L   
Sbjct: 447 MIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSY--FDLMKN 504

Query: 371 LEGWDSICNT---MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG--LIKNGDV 422
           +   D   +    M+D++ + G  + A +  ++M     V++W SL++   + KN D+
Sbjct: 505 VHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDL 562



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 128/231 (55%), Gaps = 4/231 (1%)

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + N ++++Y K G    A  +F+ M  KT  SWN++++G  K G +E A +VF  +P RD
Sbjct: 12  LMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRD 71

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            +SW T++ G  Q   FE+A+++F  M+ +++   + T+  V ++C   G+  + K +++
Sbjct: 72  SVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHS 131

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           ++ K G+H  + +A +L++M+A+ GD + A  VF RM+ R+ S+W A I      G  + 
Sbjct: 132 FVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDL 191

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
           A+  F E+L +    D + +  ++  C+  G  N+    F S+     + P
Sbjct: 192 ALAQF-ELLSE---RDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 243/558 (43%), Positives = 354/558 (63%), Gaps = 1/558 (0%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSA 346
           G++  A+ LF   +  ++ + NT++  Y       +A+    EM       PD  T    
Sbjct: 83  GSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLL 142

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           + A +++  L  G   H +V + G     S+ N ++ MY  CG  E A  +FD       
Sbjct: 143 LKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDG 202

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
            SWN +I G +K G  +SAR +F  MP RD +SW+ M+ G  QE+ F+E + LF+ M+ E
Sbjct: 203 ASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGE 262

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
           +I+ +   +V   SAC +LGA++  +WI  Y+E+  +   ++L TAL+DM+++CG  +RA
Sbjct: 263 KIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERA 322

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
           ++VF +M++++V AW+A I  +A+ G G+ A+ LF++M  QG+KP+ + F+G+L ACSH 
Sbjct: 323 LEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHS 382

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
            LV++G   F SMT I+G+ P   H+ CMVDL GRAG+L +A  +IKSMP +PN  IWG+
Sbjct: 383 KLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGA 442

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+ H + ++     +R+ ELDP   G +VLLSNIYA+ G+W  VA +R  M+E+ +
Sbjct: 443 LLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQV 502

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            K PG S I++   +HEF +GD SHP++  I + L EM+  L+ AGY PD   VLLD+DE
Sbjct: 503 SKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDE 562

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EK+  L HHSEKLA+AFGLI T     IR+ KNLR+C DCHS  KL+SK+Y+REIIVRD
Sbjct: 563 EEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRD 622

Query: 827 NNRFHFFRQGSCSCSDFW 844
             RFH FR GSCSC DFW
Sbjct: 623 RCRFHHFRDGSCSCMDFW 640



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/546 (26%), Positives = 256/546 (46%), Gaps = 60/546 (10%)

Query: 8   SPLVLATPTVTTLTNQHKAK-TTPK---DSPSIGSLKNCKTLNELKQPHCHILKQGLGHK 63
           SPL L  P+ + L NQ+     TP+     P +  L +CKTL +L Q H   +  G+   
Sbjct: 9   SPLSL--PSQSNLQNQNPPWIPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGI-FS 65

Query: 64  PSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAI 123
            ++++  + + A +    S+ YA+  F Y I+  +    +F+ N+LIR Y+     ++A+
Sbjct: 66  DNFVASRILSFAALSPHGSIPYARFLF-YRIRKPD----IFIANTLIRAYAFSPNPIDAV 120

Query: 124 SLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
             Y E+    ++ PD  TFP +L AC++  +   G  +H  + K+G+  +V V N L+  
Sbjct: 121 VFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQM 180

Query: 183 YGECGDI------------VDG-------------------RRVFDEMSERNVVSWTSLI 211
           Y  CG I             DG                   RR+F+ M +R+VVSW+ +I
Sbjct: 181 YASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMI 240

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
               +    KE + LF +M+ E I+PN   +V  +SACA L  +E G  +  Y++   ++
Sbjct: 241 NGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVR 300

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
               +  AL+DMY KCG+V+ A ++F + K++N++  + +++     G  ++AL +  +M
Sbjct: 301 LTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQM 360

Query: 332 LLHGPRPDRVTMLSAVSA--SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            + G +P+ VT +  ++A   ++L D  C    H      GL+        M+D+Y + G
Sbjct: 361 EMQGVKPNEVTFIGILNACSHSKLVDEGCS-FFHSMTSIYGLKPNAHHHCCMVDLYGRAG 419

Query: 390 KQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG-- 446
             + A  +   M  K   + W +L+     +GD E   +V     G+  +  +   GG  
Sbjct: 420 MLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQV-----GKRLLELDPNHGGRY 474

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
           +   N++       RV    R+  +R   V     C +   +DL   I+ ++  +  H  
Sbjct: 475 VLLSNIYAACGRWDRVAELRRMMRER--QVSKTPGCSF---IDLGDTIHEFVAGDSSHPQ 529

Query: 507 MQLATA 512
           +++  A
Sbjct: 530 LEMIYA 535


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/559 (44%), Positives = 349/559 (62%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G ++ A ++F +    +  + NTI   Y+R  LAR  + +   ML     P++ T   
Sbjct: 66  KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A      +  G+  H +VL+ G        N +I MY+     E A R+FD+M  + 
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           VVSW SLI G  + G V+ AREVF  MP R+ +SWN M+    Q N   EA  LF  M  
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E + +D+     + SAC  LGAL+  KWI+ YIEK+GI  D +LAT ++DM+ +CG  ++
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 305

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A +VF  + ++ +S+W   IG +AM G GE A+ELF EM R+ + PD I FV VL+AC+H
Sbjct: 306 ASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAH 365

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV +G H F+ MT++ G+ P + H+GCMVDLLGRAGLL EA  LI  MPV P+  + G
Sbjct: 366 SGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLG 425

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +L+ AC+ H N ++     +++ EL+P  SG +VLL+N+YASAG+W +VA+VR  M ++G
Sbjct: 426 ALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRG 485

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K PG S IE    V EF +G  +HP+   I + L E+   +R  GYVPD   VL D+D
Sbjct: 486 VKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDID 545

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+EK+  L +HSEKLA+AFGL+ T     +R+ KNLR+C DCH  +KL+SKVYDREII+R
Sbjct: 546 EEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIR 605

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH FR G CSC D+W
Sbjct: 606 DRNRFHHFRMGGCSCKDYW 624



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 202/456 (44%), Gaps = 55/456 (12%)

Query: 10  LVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISK 69
           L+ A+P   +    HK        P  G L +C T+ ELKQ H  I++ GL      + +
Sbjct: 6   LLQASPPSLSSAKAHKL-------PLYG-LDSCSTMAELKQYHSQIIRLGLSADNDAMGR 57

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           V+  CA +     L YA + FD     +      ++YN++ RGY    L    I +Y  +
Sbjct: 58  VIKFCA-ISKSGDLNYALEVFDKIPHPDA-----YIYNTIFRGYLRWQLARNCIFMYSRM 111

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
               + P+KFT+P ++ AC    A  EG Q+H  ++K GF  D F  N LI+ Y     +
Sbjct: 112 LHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSL 171

Query: 190 VDGRRVFDEMSERNVVSWTSLI-------------------------------CACARRD 218
              RRVFD M +R+VVSWTSLI                                A  + +
Sbjct: 172 EQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSN 231

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
              EA  LF  M  E +  +      ++SAC  L  LE G  +  YI++ G++ ++ +  
Sbjct: 232 RLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLAT 291

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            ++DMY KCG ++ A ++F E   + +   N ++      G    A+ +  EM      P
Sbjct: 292 TVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAP 351

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYV-----LRNGLEGWDSICNTMIDMYMKCGKQEM 393
           D +T ++ +SA A  G +  G+    Y+     L+ G+E +      M+D+  + G  E 
Sbjct: 352 DGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF----GCMVDLLGRAGLLEE 407

Query: 394 ACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREV 428
           A ++ + M  N       +L+     +G+ E   ++
Sbjct: 408 ARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQI 443



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 193/448 (43%), Gaps = 69/448 (15%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMS 200
           + L++C   S   E  Q H  I+++G   D      +I F    + GD+     VFD++ 
Sbjct: 25  YGLDSC---STMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIP 81

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
             +   + ++     R  L +  ++++  M+ + + PN  T   +I AC     +E G +
Sbjct: 82  HPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQ 141

Query: 261 VCAYIDELGMKANALMVNALVDMYM-------------------------------KCGA 289
           + A++ + G  A+   +N L+ MY+                               + G 
Sbjct: 142 IHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGF 201

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           VD A+++F    +RN V  N +++ YV+     EA A+ D M L     D+    S +SA
Sbjct: 202 VDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSA 261

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
              LG L  G+  HGY+ ++G+E    +  T+IDMY KCG  E A  +F+ +  K + SW
Sbjct: 262 CTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSW 321

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N +I GL  +G  E+A E+F EM                                 E + 
Sbjct: 322 NCMIGGLAMHGKGEAAIELFKEME-------------------------------REMVA 350

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
            D +T V V SAC + G ++  K  + Y+ E  G+   M+    +VD+  R G  + A +
Sbjct: 351 PDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARK 410

Query: 529 VFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +   M    D     A +GA  + GN E
Sbjct: 411 LINEMPVNPDAGVLGALVGACRIHGNTE 438


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/709 (36%), Positives = 409/709 (57%), Gaps = 35/709 (4%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           +  F  N +++ + + G++   RRVFDE+ + + VSWT++I       L K AV+ F  M
Sbjct: 77  KTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM 136

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG-- 288
           V  GI P   T   V+++CA  Q L++G +V +++ +LG      + N+L++MY KCG  
Sbjct: 137 VSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDS 196

Query: 289 -----------------------------AVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
                                          D A  LF +  D ++V  N+I++ Y   G
Sbjct: 197 VMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQG 256

Query: 320 LAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
               AL     ML     +PD+ T+ S +SA A    L  G+  H +++R  ++   ++ 
Sbjct: 257 YDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVG 316

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKT--VVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           N +I MY K G  E+A RI +     +  V+++ SL+ G  K GD++ AR +F  +  RD
Sbjct: 317 NALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            ++W  M+ G  Q  +  +A+ LFR+M+ E  K +  T+  V S    L +LD  K ++A
Sbjct: 377 VVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHA 436

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGE 555
              +      + +  AL+ M++R G  + A ++F  +   RD   WT+ I ++A  G G 
Sbjct: 437 VAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGN 496

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+ELF +MLR  +KPD I +VGVL+AC+H GLV QG   F  M ++H + P   HY CM
Sbjct: 497 EAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACM 556

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           +DLLGRAGLL EA + I++MP+EP+ V WGSLL++C+ H+ VD+A  AAE++  +DP  S
Sbjct: 557 IDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNS 616

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G ++ L+N  ++ GKW + A+VR  MK++ ++K  G S +++  KVH F   D  HP+ +
Sbjct: 617 GAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRD 676

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            I  M+ ++   ++  G++PD  +VL D++++ K+ +L HHSEKLA+AF LI+T K   +
Sbjct: 677 AIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTV 736

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R++KNLR+C DCHS  + +S + +REIIVRD  RFH F+ GSCSC D+W
Sbjct: 737 RIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 169/358 (47%), Gaps = 39/358 (10%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLNACTKSSAF 154
           D  T   +  +NS+I GY   G  + A+  +   L    + PDKFT   VL+AC    + 
Sbjct: 235 DQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESL 294

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGEC---------------------------- 186
             G Q+H  IV+   D    V N LI+ Y +                             
Sbjct: 295 KLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLD 354

Query: 187 -----GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
                GDI   R +FD +  R+VV+WT++I   A+  L  +A+ LF  M+ EG KPN+ T
Sbjct: 355 GYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYT 414

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE-C 300
           +  V+S  + L +L+ G ++ A    L   ++  + NAL+ MY + G++  A+++F   C
Sbjct: 415 LAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHIC 474

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
             R+ +   +++ +  + GL  EA+ + ++ML    +PD +T +  +SA   +G +  G+
Sbjct: 475 SYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK 534

Query: 361 MCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
             +  +++N   +E   S    MID+  + G  E A     +M     VV+W SL++ 
Sbjct: 535 -SYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSS 591


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/819 (33%), Positives = 449/819 (54%), Gaps = 43/819 (5%)

Query: 30  PKDSPSIGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  +  +  L+ C   K ++  ++ H H+  +G          ++   AQ G   S+  A
Sbjct: 3   PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCG---SVPEA 59

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           Q+ F+   + +     +F +  +I  Y   G    A+ ++ ++    ++P K T+  +LN
Sbjct: 60  QQVFEILERKD-----VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILN 114

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           AC  + +  +G+++HG I++ GF+ DVFV   LIN Y +CG +      F  +  R+VVS
Sbjct: 115 ACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS 174

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           WT++I AC + D    A +L+  M  +G+ PN +T+  V +A      L  G  + + + 
Sbjct: 175 WTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVS 234

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
              M+++  ++N+ ++M+   G +  A++LF +  DR++V  N +++ YV+     EA+ 
Sbjct: 235 SRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVR 294

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +   +   G + + +T +  ++    L  L  G++ H  V   G +    +   ++ +Y 
Sbjct: 295 LFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYG 354

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           +C     A +IF  M +K V++W  +     +NG                          
Sbjct: 355 RCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNG-------------------------- 388

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                  +EA++LF+ M  E  +    T+V V   C +L AL   + I+++I +NG   +
Sbjct: 389 -----FRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRME 443

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           M + TAL++M+ +CG    A  VF +M KRD+  W + +GA A  G  ++ ++LFN+M  
Sbjct: 444 MVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQL 503

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
            G K D++ FV VL+A SH G V  G+  F +M     ++P    YGC+VDLLGRAG + 
Sbjct: 504 DGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQ 563

Query: 627 EALDLI-KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
           EA+D++ K     P+ ++W +LL AC+ H   D A  AAE++ E DP  SG +V+LSN+Y
Sbjct: 564 EAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVY 623

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
           A+AG W  V R+R  M+ +G++K PG SSIE+  +VHEF  GD SHP  + I + L  +N
Sbjct: 624 AAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLN 683

Query: 746 CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             +R AGY+PD   +L DV+++ K+ +L +HSE+LA+AFGL+ST    P+RV+KNLR+C 
Sbjct: 684 SEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCS 743

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCH+  K +SK+  REI+VRD +RFH F+ G CSC D+W
Sbjct: 744 DCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/520 (23%), Positives = 211/520 (40%), Gaps = 93/520 (17%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
            KP++   V ++  C+  +N++ G RV  ++ + G + N L+   L+ MY +CG+V  A+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           Q+F   + +++     ++  Y + G    AL +  +M      P +VT ++ ++A A   
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            L  G   HG +L+ G EG   +   +I+MY KCG    A   F  + ++ VVSW ++IA
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
             +                               Q + F  A  L+R M  + +  +++T
Sbjct: 181 ACV-------------------------------QHDQFALARWLYRRMQLDGVVPNKIT 209

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +  V +A G    L   K+IY+ +    +  D+++  + ++MF   G    A ++F  M 
Sbjct: 210 LYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMV 269

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV------GVLTACSHGGL 588
            RDV  W   I       N  +AV LF  + + GIK + I FV        LT+ + G +
Sbjct: 270 DRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKV 329

Query: 589 VN-----------------------------QGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           ++                             Q W +F  M      S  ++ +  M    
Sbjct: 330 IHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMG-----SKDVITWTVMCVAY 384

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSL---------LAACQK----HQNVDIAAYAAER 666
            + G   EAL L + M +E       +L         LAA QK    H ++    +  E 
Sbjct: 385 AQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEM 444

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           + E           L N+Y   GK      V  +M ++ I
Sbjct: 445 VVE---------TALINMYGKCGKMAEARSVFEKMAKRDI 475


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 290/810 (35%), Positives = 441/810 (54%), Gaps = 49/810 (6%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L+ C+ L  ++Q H  I   G      ++   +      G   S+  A+ AFD   + N
Sbjct: 33  ALRQCQDLESVRQIHDRI--SGAASANVFLGNEIVRA--YGKCGSVASARVAFDAIARKN 88

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
           + S     + S++  Y+  G    A+ LY  +    + P+   +  VL AC    A  EG
Sbjct: 89  DYS-----WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEG 140

Query: 158 VQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACA 215
             +H  I    G   DV +EN L+  Y +CG + D +R+F+ MS  R+V SW ++I A A
Sbjct: 141 KAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYA 200

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +    +EA+ L+ +M    ++P+  T   V+SAC+ L  L+ G ++ A I   G + +  
Sbjct: 201 QSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLS 257

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + NAL+ MY +C  +D A ++F     R++V  + +++ +    L  EA+    +M L G
Sbjct: 258 LQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG 317

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            RP+  T  S + A A +GDL  GR  H  +L NG +                       
Sbjct: 318 VRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYK----------------------- 354

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                    T+V+  +L+      G ++ AR +F ++  RD   W  ++GG +++     
Sbjct: 355 --------ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTG 406

Query: 456 AMELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
            +EL+R M  + ++   ++    V SAC  LGA   A+  ++ IE +G+  D  LAT+LV
Sbjct: 407 VLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLV 466

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           +M++R G+ + A QVF +M  RD  AWT  I   A  G    A+ L+ EM  +G +P  +
Sbjct: 467 NMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSEL 526

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ VL ACSH GL  QG  LF S+   + + P I HY C++DLL RAG L +A +LI +
Sbjct: 527 TFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINA 586

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MPVEPNDV W SLL A + H++V  A +AA +IT+LDP     +VLLSN++A  G    +
Sbjct: 587 MPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGM 646

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           A VR  M  +G++K  GSS IEV  ++HEF  GD SHP    I + L+ ++ ++++AGYV
Sbjct: 647 ASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYV 706

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           P+   VL DV E+EK+ LL  HSEKLA+AFGLI+T+    +R+   LR+C DCHS  K +
Sbjct: 707 PESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFI 766

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S +  REIIVRD++RFH FR G CSC D+W
Sbjct: 767 SAIARREIIVRDSSRFHKFRDGQCSCGDYW 796


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/718 (37%), Positives = 411/718 (57%), Gaps = 69/718 (9%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR----RVFDEMSERNVVSWTSLICACA 215
           +H  ++K G     +  + LI F        DG      VFD + E N++ W ++    A
Sbjct: 21  IHAKMIKTGLHNTNYALSKLIEF-SVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHA 79

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
               P  A+YL+  M+  G+ PNS T   ++ ACAK +    G ++  ++ +LG   +  
Sbjct: 80  LSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLY 139

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVL---------------------------- 307
           +  +L+ MY+K G  + A+++F +   R++V                             
Sbjct: 140 VHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKD 199

Query: 308 ---CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
               N ++S Y   G  +EAL +  EM+    +PD  TM++ +SA AQ   +  GR  H 
Sbjct: 200 VVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHS 259

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           ++  +G      I N +ID+Y+KCG                               +VE+
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCG-------------------------------EVET 288

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A  +F  +  +D ISWNT++GG T  N+++EA+ LF+ ML      + VTM+ +  AC +
Sbjct: 289 ASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAH 348

Query: 485 LGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           LGA+D+ +WI+ YI+K   G+     L T+L+DM+A+CGD + A QVF  M  R +S+W 
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWN 408

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           A I   AM G    A ++F+ M + GI+PD I FVG+L+ACSH G+++ G H+FRSMT+ 
Sbjct: 409 AMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTED 468

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           + ++P++ HYGCM+DLLG +GL  EA ++I SM ++P+ VIW SLL AC+ H NV++   
Sbjct: 469 YKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGES 528

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
            A+ + +++P+ SG +VLLSNIYA+AG+W  VA+ R  + ++G++K+PG SSIE++  VH
Sbjct: 529 FAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVH 588

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           EF  GD+ HP    I  ML EM   L +AG+VPD + VL +++E+ K+  L HHSEKLA+
Sbjct: 589 EFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 648

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           AFGLIST     + +VKNLR+C +CH   KL+SK+Y REII RD  RFH F  G CSC
Sbjct: 649 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 190/560 (33%), Positives = 294/560 (52%), Gaps = 71/560 (12%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           ++ PS+  L NCKTL  L+  H  ++K GL +    +SK++        F+ LTYA   F
Sbjct: 1   RNHPSLSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVF 60

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           D   + N     L ++N++ RG++     V A+ LYV +   G++P+ +TFPF+L AC K
Sbjct: 61  DSIQEPN-----LLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAK 115

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           S AF EG Q+HG ++K+G D D++V   LI  Y + G   D R+VFD+ S R+VVS+T+L
Sbjct: 116 SKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTAL 175

Query: 211 ICACARR-----------DLP--------------------KEAVYLFFEMVEEGIKPNS 239
           I   A             ++P                    KEA+ LF EM++  +KP+ 
Sbjct: 176 IKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDE 235

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            TMV V+SACA+  ++ELG +V ++ID+ G  +N  +VNAL+D+Y+KCG V+TA  LF  
Sbjct: 236 STMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEG 295

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              ++++  NT++  Y  + L +EAL +  EML  G  P+ VTMLS + A A LG +  G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIG 355

Query: 360 RMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
           R  H Y+ +   G+    S+  ++IDMY KCG  E A ++FD M N+++ SWN++I G  
Sbjct: 356 RWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
            +G    A ++FS M                                 + I+ D +T VG
Sbjct: 416 MHGRANPAFDIFSRMR-------------------------------KDGIEPDDITFVG 444

Query: 478 VASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-K 535
           + SAC + G LDL + I+ +  E   I   ++    ++D+    G  + A ++   ME  
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMD 504

Query: 536 RDVSAWTAAIGAMAMEGNGE 555
            D   W + + A  M GN E
Sbjct: 505 PDGVIWCSLLKACKMHGNVE 524


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  507 bits (1306), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 270/714 (37%), Positives = 413/714 (57%), Gaps = 48/714 (6%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE--CGDIVD 191
            LP    FP  L  C       E  Q+H   +K        V + L+  Y +    ++  
Sbjct: 13  FLPPNLHFP--LQNCGTER---EANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQY 67

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
              +FD + E  +VSW  LI          +A+ LF +++ + + P+S T+ CV+  CA+
Sbjct: 68  AHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCAR 126

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L  L+ G ++   + ++G   +  ++++LV MY KCG ++  +++F   +D+++V  N++
Sbjct: 127 LGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSL 186

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +  Y R G    AL + +EM    P  D  +                             
Sbjct: 187 IDGYARCGEIELALEMFEEM----PEKDSFS----------------------------- 213

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
             W      +ID   K GK E A  +FD M  +  VSWN++I G +K GD  +A+E+F +
Sbjct: 214 --W----TILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQ 267

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           MP R  ++WN+M+ G  +   F +A++LF VML E I  +  T++G  SA   + +L   
Sbjct: 268 MPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTG 327

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           +W+++YI K+G   D  L T L++M+++CG  + A++VFR + K+ +  WT+ I  + M 
Sbjct: 328 RWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMH 387

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G  EQ +ELF+EM R G+KP +I F+GVL ACSH G        F+ MT  +G+ P I H
Sbjct: 388 GLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEH 447

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           YGC++D+L RAG L EA D I+ MP++ N VIW SLL+  +KH N+ +  YAA+ + +L 
Sbjct: 448 YGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLA 507

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           P+ +G +V+LSN+YA+AG W  V +VR  MK++G++K PG SSIE  G +HEF  GD+SH
Sbjct: 508 PDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSH 567

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE-QEKKYLLSHHSEKLAMAFGLISTS 790
           P+   I   L EM  +L  AG++PD T VLL ++E  EK+  L  HSE+LA+AFGL++  
Sbjct: 568 PQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIK 627

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              PIR++KNLR+C DCH+  KL+S +Y+REII+RD +RFH F+ GSCSC DFW
Sbjct: 628 HGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 253/526 (48%), Gaps = 51/526 (9%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+NC T  E  Q H   +K    + PS  S+++   A      +L YA   FD+      
Sbjct: 22  LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYAD-PRINNLQYAHSLFDWI----- 75

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
              TL  +N LI+ Y       +AI+L+ +L     +PD FT P VL  C +  A  EG 
Sbjct: 76  QEPTLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEGK 134

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+HG ++K+GF  D FV + L++ Y +CG+I   R+VFD M +++VVSW SLI   AR  
Sbjct: 135 QIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCG 194

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
                + L  EM EE  + +S +   +I   +K   LE    V    D + ++ N++  N
Sbjct: 195 ----EIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDV---FDRMPIR-NSVSWN 246

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           A+++ YMK G  +TAK+LF +  +R+LV  N++++ Y R     +AL + + ML     P
Sbjct: 247 AMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISP 306

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +  T+L AVSA++ +  L  GR  H Y++++G +    +   +I+MY KCG  + A R+F
Sbjct: 307 NYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVF 366

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             +  K +  W S+I GL  +G VE                               + +E
Sbjct: 367 RSIPKKKLGHWTSVIVGLGMHGLVE-------------------------------QTLE 395

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           LF  M    +K   +T +GV +AC + G A D  ++        GI   ++    L+D+ 
Sbjct: 396 LFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVL 455

Query: 518 ARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
            R G  + A     RM  K +   WT+ +      GN   GE A +
Sbjct: 456 CRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQ 501


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  507 bits (1306), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/808 (31%), Positives = 445/808 (55%), Gaps = 44/808 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
            K   +++ L Q H  I+  G  +  S ++K+    + +G   ++ YA+  F    + + 
Sbjct: 27  FKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLG---AIYYARDIFLSVQRPD- 82

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGEG 157
               +F++N L+RG+S       +++++  L     + P+  T+ F ++A +       G
Sbjct: 83  ----VFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             +HG  +  G D ++ + + ++  Y +   + D R+VFD M E++ + W ++I    + 
Sbjct: 139 CVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198

Query: 218 DLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
           ++  E++ +F +++ E   + ++ T++ ++ A A+LQ L LG ++ +   + G  ++  +
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           +   + +Y KCG +  A  LF E +  ++V  N ++  Y   G    +L++  E++L G 
Sbjct: 259 LTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           +    T++S V  S   G L+     HGY L++      S+   +  +Y K         
Sbjct: 319 KLKSSTLVSLVPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLN------- 368

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                   ++ESAR++F E P +   SWN M+ G TQ  + E+A
Sbjct: 369 ------------------------EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + LFR M +     + VT+  + SAC  LGAL L KW++  +        + ++TAL+ M
Sbjct: 405 ISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGM 464

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +A+CG    A ++F  M K++   W   I    + G+G++A+ +F+EML  GI P  + F
Sbjct: 465 YAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTF 524

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           + VL ACSH GLV +G  +F SM   +G  P + HY C+VD+LGRAG L  AL  I++MP
Sbjct: 525 LCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMP 584

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           ++P   +W +LL AC+ H++ ++A   +E++ ELDP+  G HVLLSNI+++   +   A 
Sbjct: 585 IQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAAT 644

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR   K++ + K PG + IE+    H FTSGD+SHP++  I   L ++  ++R+AGY P+
Sbjct: 645 VRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPE 704

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
               L DV+E+E++ ++  HSE+LA+AFGLI+T     IR++KNLR+C DCH+  KL+SK
Sbjct: 705 TELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISK 764

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + +R I+VRD NRFH F+ G CSC D+W
Sbjct: 765 ITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 268/747 (35%), Positives = 426/747 (57%), Gaps = 38/747 (5%)

Query: 104 FMYNSLIRGYSC-----IGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           F ++S+++G S      +G  +  ++L  E+   GI P++F+   VLNAC        G+
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           +VHG ++K+G+D D F  N L++ Y + G       VF E+ + ++VSW ++I  C   +
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
               A+ L  +M    + P+  T+   + ACA +  ++LG ++ + + ++ M+ ++ +  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            L+DMY KCG +  A+ +F     +++++ N+I+S Y   G   EA+++   M   G   
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 339 DRVTMLSAVSASA-QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           ++ T+ + + ++A    +  C ++ H   +++G +    + N+++D Y KC      C +
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQV-HTISIKSGYQYDGYVANSLLDSYGKC------CLL 441

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                    E A +VF   P  D +++ +M+   +Q  + EEA+
Sbjct: 442 -------------------------EDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEAL 476

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           +++  M    IK D      + +AC  L A +  K I+ ++ K G+  D+    +LV+M+
Sbjct: 477 KMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMY 536

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG    A  +F  +  R + +W+A IG +A  G+G +A++LF +ML+ GI P+ I  V
Sbjct: 537 AKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLV 596

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL+AC+H GLV +    F  M  + G++P   HY CMVD+LGR G L EA+ L+K MP 
Sbjct: 597 SVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPF 656

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           + +  +WG+LL A + H+N+++  +AAE +  L+PEKSG H+LL+NIYAS G W NVA+V
Sbjct: 657 QASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKV 716

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  MK   ++K PG S IE+  KV+ F  GD SHP    I   L ++  RL  AGYVP +
Sbjct: 717 RRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMI 776

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
              L DV++ EK+ LL HHSEKLA+AFGLI+T    PIRV KNLR+C DCH+  K +SKV
Sbjct: 777 ETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKV 836

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
             REIIVRD NRFH FR GSCSC D+W
Sbjct: 837 ASREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 171/327 (52%), Gaps = 2/327 (0%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           + ++NS+I GYS  G  +EA+SL+  +   G+  ++ T   +L +   S A G   QVH 
Sbjct: 355 VIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHT 414

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             +K G+  D +V N L++ YG+C  + D  +VF+     ++V++TS+I A ++  L +E
Sbjct: 415 ISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEE 474

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+ ++  M +  IKP++     + +ACA L   E G ++  ++ + G+ ++    N+LV+
Sbjct: 475 ALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVN 534

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG++D A  +F E   R +V  + ++    + G  R+AL +  +ML +G  P+ +T
Sbjct: 535 MYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHIT 594

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           ++S +SA    G +   R   G + +  G+         M+D+  + G+ + A  +   M
Sbjct: 595 LVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEM 654

Query: 402 S-NKTVVSWNSLIAGLIKNGDVESARE 427
               +   W +L+     + ++E  R 
Sbjct: 655 PFQASAAVWGALLGAARIHKNIELGRH 681



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 12/176 (6%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           N     + KQ H H+LK GL       + +V   A+ G+ +    A   F      NE S
Sbjct: 503 NLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDD---ASCIF------NEIS 553

Query: 101 -ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
              +  ++++I G +  G G +A+ L+ ++   GILP+  T   VL+AC  +    E  +
Sbjct: 554 WRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARR 613

Query: 160 VHGAIVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICA 213
             G + K+ G         C+++  G  G + +   +  EM  + +   W +L+ A
Sbjct: 614 FFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGA 669


>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
          Length = 665

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 264/633 (41%), Positives = 395/633 (62%), Gaps = 9/633 (1%)

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR-----VCAYIDELGMKANAL 275
           +EAV  +  M+  G +P++ T   ++ A A  +   +        + A++ + GM++NA 
Sbjct: 33  EEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAH 92

Query: 276 MVNALVDMYMKCGAVDTAKQLFG----ECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
             ++L+ MY   G    A+ +             V+ N ++S + R G    +     +M
Sbjct: 93  AASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDM 152

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
           +        VT +S +SA  +  DLL G   H  VL +G+     + N ++DMY +CG  
Sbjct: 153 VRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDM 212

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           + A  +F+ M  +++ SW S+I+GL+++G V+ AR++F  MP RD I+W  M+ G  Q  
Sbjct: 213 DAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVG 272

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
            F +A+E FR M   +++ D  TMV V +AC  LGAL+  +W   Y+ + GI  D+ +  
Sbjct: 273 RFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGN 332

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL+DM+++CG  +RA+ VF+ M  RD   WTA I  +A+ G GE+A+++F  MLR    P
Sbjct: 333 ALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTP 392

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D + FVGVLTAC+H GLV++G   F SMT+ + +SP +VHYGC++D+LGRAG L EALD 
Sbjct: 393 DEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDT 452

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I  MP++PN  IWG+LLA+C+ + N +I   AAER+ ELDP+ S  ++LLSN+YA + +W
Sbjct: 453 IDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRW 512

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
            +V R+R  + E+GI+K PG S IE+NG +HEF + D SHP    I S L  +   LR+A
Sbjct: 513 KDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNA 572

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           GYVPD+T VL++V E+EK+ +L  HSEKLA+ F L+++   + IR+VKNLR+C DCH+  
Sbjct: 573 GYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLDCHNAI 632

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KL+SK+Y RE+IVRD  RFH FR GSCSC D+W
Sbjct: 633 KLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 209/495 (42%), Gaps = 75/495 (15%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLN-----ACTKSSAFGEGVQVHGAIVKMGFDRDVFV 175
           EA++ YV +   G  PD +TFP +L           +A   G  +H  +VK G + +   
Sbjct: 34  EAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHA 93

Query: 176 ENCLINFYGECGDIVDGRRVFDEMSERN----VVSWTSLICACARRDLPKEAVYLFFEMV 231
            + LI  Y   GD    R V +           V W +LI    R    + +   F +MV
Sbjct: 94  ASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDMV 153

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC---- 287
                  +VT V V+SAC K ++L LG +V   + E G+  +  + NALVDMY +C    
Sbjct: 154 RASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMD 213

Query: 288 ---------------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
                                      G VD A+ LF    +R+ +    ++  YV++G 
Sbjct: 214 AAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGR 273

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            R+AL     M +   R D  TM+S V+A AQLG L  G     Y+ R G++    + N 
Sbjct: 274 FRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNA 333

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMY KCG  E A  +F  M N+   +W ++I GL  NG                    
Sbjct: 334 LIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGR------------------- 374

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIE 499
                        EEA+++F  ML      D VT VGV +AC + G +D  +  + +  E
Sbjct: 375 ------------GEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTE 422

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAV 558
              I   +     L+D+  R G  + A+    +M  K + + W   + +  + GN E   
Sbjct: 423 AYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIG- 481

Query: 559 ELFNEMLRQGIKPDS 573
           EL  E L + + PD+
Sbjct: 482 ELAAERLLE-LDPDN 495



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 187/407 (45%), Gaps = 48/407 (11%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           M+N+LI G++  G    +   +V++     +    T+  VL+AC K      G+QVH  +
Sbjct: 128 MWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRV 187

Query: 165 VKMGFDRDVFVENCLINFYGECGDI------------------------------VD-GR 193
           ++ G   D  VEN L++ Y ECGD+                              VD  R
Sbjct: 188 LESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRAR 247

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            +FD M ER+ ++WT++I    +    ++A+  F  M    ++ +  TMV V++ACA+L 
Sbjct: 248 DLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLG 307

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            LE G+    Y+  LG+K +  + NAL+DMY KCG+++ A  +F +  +R+      I+ 
Sbjct: 308 ALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIIL 367

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLR 368
                G   EA+ +   ML     PD VT +  ++A    G +  GR     M   Y + 
Sbjct: 368 GLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNIS 427

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM---SNKTVVSWNSLIAG--LIKNGDV- 422
             +  +      +ID+  + GK + A    D M    N T+  W +L+A   +  N ++ 
Sbjct: 428 PTVVHY----GCLIDVLGRAGKLKEALDTIDKMPMKPNSTI--WGTLLASCRVYGNSEIG 481

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           E A E   E+   +  ++  +     + N +++   + ++++ + IK
Sbjct: 482 ELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIK 528



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 5/164 (3%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+  FD+ + + +T A    + ++I GY  +G   +A+  +  +    +  D+FT   V+
Sbjct: 246 ARDLFDH-MPERDTIA----WTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVV 300

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC +  A   G      + ++G   DVFV N LI+ Y +CG I     VF +M  R+  
Sbjct: 301 TACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKF 360

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
           +WT++I   A     +EA+ +F+ M+     P+ VT V V++AC
Sbjct: 361 TWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTAC 404


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/755 (34%), Positives = 424/755 (56%), Gaps = 34/755 (4%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           ++ D     ++ ++N +IR Y+  G   ++I LY+ +   G+ P  FTFPF+L AC+   
Sbjct: 62  HVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQ 121

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS--ERNVVSWTSL 210
           A   G  +H     +G   D++V   L++ Y +CG +   + +F+ +S  +R++V+W ++
Sbjct: 122 ALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAM 181

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I A +   L  + ++   +M + G+ PNS T+V ++    +   L  G  + AY      
Sbjct: 182 IAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFF 241

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             N ++  AL+DMY KC  +  A+++F     +N V  + ++  YV      +ALA+ D+
Sbjct: 242 FDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDD 301

Query: 331 ML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           ML ++G  P   T+ + + A AQL DL  G+  H +++++G++   ++ N++I MY KCG
Sbjct: 302 MLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCG 361

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             + A    D                               EM  +D +S++ ++ G  Q
Sbjct: 362 IMDNAVGFLD-------------------------------EMIAKDTVSYSAIISGCVQ 390

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
               E+A+ +FR M S  I     TM+ +  AC +L AL      + Y    G   D  +
Sbjct: 391 NGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSI 450

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
             A++DM+++CG    + ++F RM+ RD+ +W   I    + G   +A+ LF E+   G+
Sbjct: 451 CNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGL 510

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           KPD +  + VL+ACSH GLV +G + F SM+    + P++ HY CMVDLL RAG L EA 
Sbjct: 511 KPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAY 570

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
             I+ MP  PN  IWG+LLAAC+ H+N+++    +++I  L PE +G  VL+SNIY+S G
Sbjct: 571 TFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVG 630

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
           +W + A +R   +  G +K PG S +E++G +H F  G +SHP+  +I+  L+E+  +++
Sbjct: 631 RWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMK 690

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
             GY  D + VL DV+E+EK+ +L +HSEK+A+AFG+++TS +  I V KNLR+C DCHS
Sbjct: 691 KLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHS 750

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             K ++ + +REI VRD +RFH F+ G C+C DFW
Sbjct: 751 AIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 254/539 (47%), Gaps = 50/539 (9%)

Query: 29  TPKDSPSIGSLKNCKTLNELK-----QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
           TP +      LK C +L  L+       H HIL  GL       + ++   A+ G    L
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHIL--GLSMDLYVSTALLHMYAKCG---HL 158

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
             AQ  F+     +     +  +N++I  +S   L  + I    ++   G+ P+  T   
Sbjct: 159 YQAQTLFN---SISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVS 215

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L    +++A  +G  +H   ++  F  +V ++  L++ Y +C  +   R++F+ ++++N
Sbjct: 216 ILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKN 275

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
            V W+++I      D   +A+ L+ +M+   G+ P   T+  ++ ACA+L +L+ G ++ 
Sbjct: 276 DVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLH 335

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
            ++ + GM  +  + N+L+ MY KCG +D A     E   ++ V  + I+S  V+ G A 
Sbjct: 336 CHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAE 395

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +AL I  +M   G  P   TM++ + A + L  L  G  CHGY +  G     SICN +I
Sbjct: 396 KALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAII 455

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY KCGK  ++  IFD M N+ ++SWN++I G   +G                      
Sbjct: 456 DMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHG---------------------- 493

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN- 501
                    +  EA+ LF+ + +  +K D VT++ V SAC + G +   K+ ++ + +N 
Sbjct: 494 ---------LCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNF 544

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQ 556
            I   M     +VD+ AR G+   A    +RM    +V  W A + A     N   GEQ
Sbjct: 545 NIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQ 603



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 205/430 (47%), Gaps = 28/430 (6%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQP---HCHILKQGLGHKPSYIS 68
           L   T+ ++    +A  TP  S  +  L      N L Q    H + ++        +  
Sbjct: 190 LHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN------FFFD 243

Query: 69  KVVCTCAQMGTFES---LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
            VV   A +  +     L YA+K F+   K N+       ++++I GY       +A++L
Sbjct: 244 NVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVC-----WSAMIGGYVLHDSISDALAL 298

Query: 126 YVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           Y + L  +G+ P   T   +L AC + +    G ++H  ++K G D D  V N LI+ Y 
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYA 358

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG + +     DEM  ++ VS++++I  C +    ++A+ +F +M   GI P   TM+ 
Sbjct: 359 KCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIA 418

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++ AC+ L  L+ G     Y    G   +  + NA++DMY KCG +  ++++F   ++R+
Sbjct: 419 LLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRD 478

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR---- 360
           ++  NT++  Y   GL  EAL++  E+   G +PD VT+++ +SA +  G +  G+    
Sbjct: 479 IISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFS 538

Query: 361 -MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN-KTVVSWNSLIAGLIK 418
            M   + ++  +  +  IC  M+D+  + G  + A      M     V  W +L+A    
Sbjct: 539 SMSQNFNIKPRMAHY--IC--MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRT 594

Query: 419 NGDVESAREV 428
           + ++E   +V
Sbjct: 595 HKNIEMGEQV 604


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 401/683 (58%), Gaps = 64/683 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF  + E N + W +++   A    P  A+ L+  M+  G+ PNS T   ++ +CAK + 
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMK---------------------------- 286
            E G ++  ++ +LG + +  +  +L+ MY +                            
Sbjct: 82  FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141

Query: 287 ---CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
               G + +A+++F E   +++V  N ++S Y   G  +EAL +  EM+    RPD  TM
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           ++ +SA AQ   +  GR  H ++  +G      I N +ID+Y KCG+             
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ------------- 248

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                             VE+A  +F  +  +D +SWNT++GG T  N+++EA+ LF+ M
Sbjct: 249 ------------------VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEM 290

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQLATALVDMFARCG 521
           L      + VT+V +  AC +LGA+D+ +WI+ YI+K    +     L T+L+DM+A+CG
Sbjct: 291 LRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCG 350

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           D + A QVF  M  + +S+W A I   AM G      +LF+ M + GI+PD I FVG+L+
Sbjct: 351 DIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLS 410

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH G ++ G H+F+SMT  + ++P++ HYGCM+DLLG +GL  EA ++IK+MP+EP+ 
Sbjct: 411 ACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDG 470

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           VIW SLL AC++H N+++A   A  + +++PE  G +VLLSNIYA+AG+W  VA+VR  +
Sbjct: 471 VIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALL 530

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
             +G++K+PG SSIE++ +VHEF  GD+ HP    I  ML EM   L +AG+VPD + VL
Sbjct: 531 NGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVL 590

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +++E+ K+  L HHSEKLA+AFGLIST     + +VKNLR+C +CH   KLVSK+Y RE
Sbjct: 591 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKRE 650

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           II RD  RFH FR G CSC+DFW
Sbjct: 651 IIARDRTRFHHFRDGVCSCNDFW 673



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 171/553 (30%), Positives = 286/553 (51%), Gaps = 72/553 (13%)

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
           SK++  C     F+   YA   F    + N+      ++N+++RGY+     V A+ LYV
Sbjct: 1   SKLLEFCVLSPHFDGFPYAISVFATIQEPNQ-----LIWNTMLRGYALSSDPVSALKLYV 55

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +   G+LP+ +TFPF+L +C KS AF EG Q+HG ++K+G++ D++V   LI+ Y + G
Sbjct: 56  VMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNG 115

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARR-----------DLP---------------- 220
            + D  +VFD  S R+VVS+T+LI   A             ++P                
Sbjct: 116 RLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAE 175

Query: 221 ----KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
               KEA+ LF EM++  ++P+  TMV V+SACA+ +++ELG +V ++ID+ G  +N  +
Sbjct: 176 TGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKI 235

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           VNAL+D+Y KCG V+TA  LF     +++V  NT++  Y  + L +EAL +  EML  G 
Sbjct: 236 VNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE 295

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMA 394
            P+ VT++S + A A LG +  GR  H Y+ +    +    S+  ++IDMY KCG  E A
Sbjct: 296 SPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAA 355

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            ++F+ M +K++ SWN++I G   +G   +  ++FS M                ++N  E
Sbjct: 356 HQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRM----------------RKNGIE 399

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATAL 513
                           D +T VG+ SAC + G LDL + I+  + ++  I   ++    +
Sbjct: 400 P---------------DDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCM 444

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-QGIKP 571
           +D+    G  + A ++ + M  + D   W + + A    GN E A      +++ +   P
Sbjct: 445 IDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENP 504

Query: 572 DSIVFVGVLTACS 584
            S V +  + A +
Sbjct: 505 GSYVLLSNIYATA 517



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 210/412 (50%), Gaps = 35/412 (8%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F   ++ N ++ NT++  Y        AL +   M+  G  P+  T    + + A+
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
                 G+  HG+VL+ G E    +  ++I MY + G+ E A ++FD  S++ VVS+ +L
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I G   +G++ SA+E+F E+P +D +SWN M+ G  +   ++EA+ELF+ M+   ++ D 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            TMV V SAC    +++L + ++++I+ +G   ++++  AL+D++++CG  + A  +F  
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +  +DV +W   IG        ++A+ LF EMLR G  P+ +  V +L AC+H G ++ G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 593 -W-HLF--RSMTDI-----------------------HGVSPQIVH-----YGCMVDLLG 620
            W H++  + + D+                       H V   ++H     +  M+    
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378

Query: 621 RAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
             G      DL   M    +EP+D+ +  LL+AC     +D+  +  + +T+
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 202/426 (47%), Gaps = 48/426 (11%)

Query: 39  LKNC---KTLNELKQPHCHILKQGLGHKPS-YI-SKVVCTCAQMGTFESLTYAQKAFDYY 93
           LK+C   K   E +Q H H+LK  LG++P  Y+ + ++   AQ G  E    A K FD  
Sbjct: 73  LKSCAKSKAFEEGQQIHGHVLK--LGYEPDLYVHTSLISMYAQNGRLED---AHKVFDRS 127

Query: 94  IKDNETSATLFM--------------------------YNSLIRGYSCIGLGVEAISLYV 127
              +  S T  +                          +N++I GY+  G   EA+ L+ 
Sbjct: 128 SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFK 187

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           E+    + PD+ T   VL+AC +S +   G QVH  I   GF  ++ + N LI+ Y +CG
Sbjct: 188 EMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 247

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            +     +F+ +S ++VVSW +LI      +L KEA+ LF EM+  G  PN VT+V ++ 
Sbjct: 248 QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILP 307

Query: 248 ACAKLQNLELGDRVCAYID-ELGMKANAL-MVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           ACA L  +++G  +  YID +L    NA  +  +L+DMY KCG ++ A Q+F     ++L
Sbjct: 308 ACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 367

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR----- 360
              N ++  +   G A     +   M  +G  PD +T +  +SA +  G L  GR     
Sbjct: 368 SSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKS 427

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKN 419
           M   Y +   LE +      MID+    G  + A  +   M      V W SL+    ++
Sbjct: 428 MTQDYDITPKLEHY----GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRH 483

Query: 420 GDVESA 425
           G++E A
Sbjct: 484 GNLELA 489


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/650 (38%), Positives = 388/650 (59%), Gaps = 31/650 (4%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F+ + +    ++  +I   A +  P  A+ LF +M E+ ++ +  T   V+ AC++++ 
Sbjct: 77  IFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKA 136

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G++V A I + G K+N  + N L+ MY  CG +  A+ +F    +R++V  N+++S 
Sbjct: 137 LREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSG 196

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y + GL  E + +  ++L      D VTM+S + A  +L +L  G +   Y++  GL   
Sbjct: 197 YTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRN 256

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
           +++  ++IDMY KCG+                               V++AR++F EM  
Sbjct: 257 NTLTTSLIDMYAKCGQ-------------------------------VDTARKLFDEMDK 285

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           RD ++W+ M+ G  Q +  +EA+ LF  M    +  + VTMV V  +C  LGA +  KW+
Sbjct: 286 RDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWV 345

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           + YI+K  +   + L T L+D +A+CG   R+++VF+ M  ++V  WTA I  +A  G G
Sbjct: 346 HFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEG 405

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           + A+E F+ ML   +KP+ + F+GVL+ACSH  LV+QG HLF SM     + P+I HYGC
Sbjct: 406 KMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGC 465

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           MVD+LGRAG L EA   I +MP  PN V+W +LLA+C+ H+N+++A  + E IT L+P  
Sbjct: 466 MVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAH 525

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
           SG ++LLSN YA  G+  +  RVR  +KE+ I+K+PG S IE++G VHEF S D  H   
Sbjct: 526 SGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHS 585

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
             I   L +M  +++  GYVP+  +  L+ +E+ K+  +SHHSEKLA+A+GLI TS    
Sbjct: 586 KEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTT 645

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           IR+ KNLR+C DCH+  K +S+V++R IIVRD NRFH F+ G CSC+D+W
Sbjct: 646 IRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 171/541 (31%), Positives = 270/541 (49%), Gaps = 39/541 (7%)

Query: 28  TTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           T   ++P    L+ CKT  +L+Q H H+LK      P  I++ V   A +   +++ YA 
Sbjct: 17  TQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDP-IITEAVLESAALLLPDTIDYAL 75

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
             F++ I   E+SA    YN +IRG +       A+ L+ ++    +  DKFTF  VL A
Sbjct: 76  SIFNH-IDKPESSA----YNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130

Query: 148 CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
           C++  A  EG QVH  I+K GF  + FVEN LI  Y  CG I   R VFD M ER++V+W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
            S++    +  L  E V LF +++E  I+ + VTM+ V+ AC +L NLE+G+ +  YI  
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
            G++ N  +  +L+DMY KCG VDTA++LF E   R++V  + ++S Y +    +EAL +
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             EM      P+ VTM+S + + A LG    G+  H Y+ +  ++   ++   +ID Y K
Sbjct: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAK 370

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  + +  +F  MS K V +W +LI GL  NG+                       G +
Sbjct: 371 CGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGE-----------------------GKM 407

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCD 506
                   A+E F  ML   +K + VT +GV SAC +   +D  + ++  + ++  I   
Sbjct: 408 --------ALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPR 459

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           ++    +VD+  R G  + A Q    M    +   W   + +     N E A +    + 
Sbjct: 460 IEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHIT 519

Query: 566 R 566
           R
Sbjct: 520 R 520



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 33/271 (12%)

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
           A L+    ++ A  +F+ +   +  ++N M+ GL  +   + A+ LF+ M  + ++ D+ 
Sbjct: 63  AALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKF 122

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T   V  AC  + AL   + ++A I K+G   +  +   L+ M+A CG    A  VF  M
Sbjct: 123 TFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGM 182

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG------ 587
            +R + AW + +      G  ++ V+LF ++L   I+ D +  + VL AC          
Sbjct: 183 PERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGE 242

Query: 588 -----LVNQGWH----LFRSMTDIHGVSPQ---------------IVHYGCMVDLLGRAG 623
                +V++G      L  S+ D++    Q               +V +  M+    +A 
Sbjct: 243 LIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQAD 302

Query: 624 LLGEALDLIKSMP---VEPNDVIWGSLLAAC 651
              EAL+L   M    V PN+V   S+L +C
Sbjct: 303 RCKEALNLFHEMQKGNVYPNEVTMVSVLYSC 333


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 269/654 (41%), Positives = 380/654 (58%), Gaps = 40/654 (6%)

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            + +F  +       + SLI A +    P EA+ L+  M++ G+KP+ +T   VI AC +
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
                 G  V  ++ + G + ++ +V++L+ +Y     +  AKQLF  C  R++V  N +
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +  YV+      A  + D M+                             C   +     
Sbjct: 268 IDGYVKHVEMGHARMVFDRMV-----------------------------CRDVI----- 293

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
             W    NTMI+ Y   GK + A R+FD M  + +VSWNS++AG +K G+VE A  +FSE
Sbjct: 294 -SW----NTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSE 348

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           MP RD +SWN+ML    Q     EA+ LF  M +  +K    T+V + SAC +LGALD  
Sbjct: 349 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 408

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
             ++ YI  N I  +  + TALVDM+A+CG    A QVF  ME +DV AW   I  MA+ 
Sbjct: 409 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 468

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           GN ++A +LF EM   G++P+ I FV +L+ACSH G+V++G  L   M+  +G+ P++ H
Sbjct: 469 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEH 528

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           YGC++DLL RAG L EA++LI +MP+EPN    G+LL  C+ H N ++     +R+  L 
Sbjct: 529 YGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQ 588

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           P  SG ++LLSNIYA+A KW +  +VR  MK  GI K+PG S IE+ G VH F +GD SH
Sbjct: 589 PCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSH 648

Query: 732 PEMNNISSMLREMNCRLRDA-GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           PE N I   L E++ RL+ A GY  D  NVLLD++E++K++ L+ HSEKLA+A+GL+   
Sbjct: 649 PESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLD 708

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
               IR+VKNLR+C DCH   KL+SKVY REIIVRD NRFH F  G CSC DFW
Sbjct: 709 SKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/532 (29%), Positives = 273/532 (51%), Gaps = 51/532 (9%)

Query: 28  TTPKDSPSIGSLKN-CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES-LTY 85
           T P  +P I SL N CKTL  LKQ H  I+     H   +    + + + +  F + L Y
Sbjct: 91  TNPPSNPQILSLFNPCKTLRHLKQVHAQIITH---HNSPFQLSALASLSALSPFPTFLAY 147

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+  F +++++   S    +YNSLIR  S     +EA+ LY  +   G+ PD  T+PFV+
Sbjct: 148 AKTIF-HHLQNPPPS----LYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVI 202

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC +SS    G+ VH  +VK GF+ D ++ + LI+ Y    D+   +++F+  S R+VV
Sbjct: 203 KACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVV 262

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW ++I    +      A  +F  MV   +    ++   +I+  A +  ++   R+    
Sbjct: 263 SWNAMIDGYVKHVEMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRL---F 315

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
           DE+  + N +  N+++  ++KCG V+ A  LF E   R++V  N++++ Y + G   EAL
Sbjct: 316 DEMPER-NLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEAL 374

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
           A+ D+M   G +P   T++S +SA A LG L  G   H Y+  N +E    +   ++DMY
Sbjct: 375 ALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 434

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            KCGK  +A ++F+ M +K V++WN++IAG+  +G+V+ A+++F EM             
Sbjct: 435 AKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEM------------- 481

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIH 504
                   +EA           ++ + +T V + SAC + G +D  + +   +  + GI 
Sbjct: 482 --------KEA----------GVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIE 523

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
             ++    ++D+ AR G  + AM++   M  + + SA  A +G   + GN E
Sbjct: 524 PKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 575


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 278/783 (35%), Positives = 431/783 (55%), Gaps = 74/783 (9%)

Query: 136 PDKFTFPFVLNACT--------KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           P   +   +L  CT        KS+       VH  ++K G    V++ N L+N Y + G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARR-----------DLPK--------------- 221
             +  R++FDEM  R   SW +++ A ++R            LP+               
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123

Query: 222 -----EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
                +A+ +  +MV+EGI+P   T+  V+++ A  + +E G +V ++I +LG++ N  +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183

Query: 277 VNALVDMYMKCG-------------------------------AVDTAKQLFGECKDRNL 305
            N+L++MY KCG                                +D A   F +  +R++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           V  N+++S + + G    AL I  +ML      PDR T+ S +SA A L  L  G+  H 
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK--TVVSWNSLIAGLIKNGDV 422
           +++  G +    + N +I MY +CG  E A R+ +    K   +  + +L+ G IK GD+
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
             A+ +F  +  RD ++W  M+ G  Q   + EA+ LFR M+    + +  T+  + S  
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
             L +L   K I+    K+G    + ++ AL+ M+A+ G+   A + F  +  +RD  +W
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSW 483

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           T+ I A+A  G+ E+A+ELF  ML +G++PD I +VGV +AC+H GLVNQG   F  M D
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
           +  + P + HY CMVDL GRAGLL EA + I+ MP+EP+ V WGSLL+AC+ H+N+D+  
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK 603

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
            AAER+  L+PE SG +  L+N+Y++ GKW   A++R  MK+  ++K  G S IEV  KV
Sbjct: 604 VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKV 663

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           H F   D +HPE N I   ++++   ++  GYVPD  +VL D++E+ K+ +L HHSEKLA
Sbjct: 664 HVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLA 723

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +AFGLIST     +R++KNLR+C DCH+  K +SK+  REIIVRD  RFH F+ G CSC 
Sbjct: 724 IAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCR 783

Query: 842 DFW 844
           D+W
Sbjct: 784 DYW 786


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 294/860 (34%), Positives = 449/860 (52%), Gaps = 89/860 (10%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGL-GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           I +LK C +L   K  H   + QGL  H  + +         +GT+ +      A     
Sbjct: 165 ITALKECNSLAHAKLLHQQSIMQGLLFHLATNL---------IGTYIASNSTAYAILLLE 215

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
           +   + +++F +N LIR    +G   +  +LY ++   G  PD +TFPFV  AC   S+ 
Sbjct: 216 RLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSL 275

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV---VSWTSLI 211
             G  +H  + + GF  +VFV N +++ YG+CG +     +FD++  R +   VSW S++
Sbjct: 276 SLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVV 335

Query: 212 CACARRDLPKEAVYLFFEMVEEGI-KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
            A         A+ LF +M    +  P+ +++V ++ ACA L     G +V  +    G+
Sbjct: 336 SAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGL 395

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             +  + NA+VDMY KCG ++ A ++F   K +++V  N +++ Y + G    AL++ + 
Sbjct: 396 VDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFER 455

Query: 331 MLLH-----------------------------------GPRPDRVTMLSAVSASAQLGD 355
           M                                      G RP+ VT++S +SA   +G 
Sbjct: 456 MTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGA 515

Query: 356 LLCGRMCHGYVLRN--GLEGWD------SICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           LL G+  H Y ++    L+G D       + N +IDMY KC   E+A ++FD +S K   
Sbjct: 516 LLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKD-- 573

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM--LS 465
                                      RD ++W  M+GG  Q      A++LF  M  + 
Sbjct: 574 ---------------------------RDVVTWTVMIGGYAQHGDANNALQLFSGMFKMD 606

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ-LATALVDMFARCGDPQ 524
           + IK +  T+     AC  L AL   + ++AY+ +N     M  +A  L+DM+++ GD  
Sbjct: 607 KSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVD 666

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A  VF  M +R+  +WT+ +    M G GE A+ +F+EM +  + PD I F+ VL ACS
Sbjct: 667 TAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACS 726

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H G+V+ G + F  M+   GV P   HY CMVDL GRAG LGEA+ LI  MP+EP  V+W
Sbjct: 727 HSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVW 786

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LL+AC+ H NV++  +AA R+ EL+    G + LLSNIYA+A +W +VAR+R  MK  
Sbjct: 787 VALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRT 846

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
           GI+K PG S I+    V  F  GD SHP+   I   L ++  R++  GYVP  +  L DV
Sbjct: 847 GIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDV 906

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           D++EK  LL  HSEKLA+A+G+++     PIR+ KNLR+C DCHS    +SK+ + EII+
Sbjct: 907 DDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIIL 966

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD++RFH F+ GSCSC  +W
Sbjct: 967 RDSSRFHHFKNGSCSCKGYW 986


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/602 (40%), Positives = 375/602 (62%), Gaps = 3/602 (0%)

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           +  + +C  L +L++   + A++       +    + L+ + +    +D A Q+F + ++
Sbjct: 19  LSFLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQN 75

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
            NL + N+ +  +       ++     +   +G  PD +T    V A  Q G L  G   
Sbjct: 76  PNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQA 135

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           HG ++R+G +    + N+++ MY   G  + A  +F  +S   VVSW S++AG IK+GDV
Sbjct: 136 HGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDV 195

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
            SAR++F +MP ++ ++W+ M+ G  + + F++A+EL+ ++ SE +  +   MV V ++C
Sbjct: 196 TSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASC 255

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
            +LGAL+L +  + YI +N +  ++ L TALVDM+ARCG   +A+ VF ++  RD  +WT
Sbjct: 256 AHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWT 315

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
             I   AM G  E+A+E F+ M + G+ P  I F  VL+ACSHGGLV +G  LF SM   
Sbjct: 316 TLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRD 375

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           + + P++ HYGCMVDLLGRAG L EA   +  MP++PN  IWG+LL AC+ H+N +IA  
Sbjct: 376 YRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAER 435

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           A + + EL PE SG +VLLSNIYA   KW NV  +R  MKE+G+ K PG +  E++GKVH
Sbjct: 436 AGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVH 495

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           +FT GD++HPE+  I  M  E+  ++R AGY  +  + L D+DE+EK+  +  HSEKLA+
Sbjct: 496 KFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAI 555

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           A+ ++ T    PIR+VKNLR+C DCH+  KL+SKVY+RE+IVRD NRFH F+ G+CSC D
Sbjct: 556 AYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMD 615

Query: 843 FW 844
           +W
Sbjct: 616 YW 617



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 231/499 (46%), Gaps = 76/499 (15%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           +P +  L++C TL+ LK  H H+++    H    +    C  +       L YA + F Y
Sbjct: 16  NPKLSFLESCTTLSHLKIIHAHLIR---AHTIFDVFAASCLISISINKNLLDYAAQVF-Y 71

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
            I++      LF+YNS IRG+S      ++   YV+    G++PD  T+PF++ ACT+  
Sbjct: 72  QIQN----PNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKG 127

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYG---------------------------- 184
           +   G+Q HG I++ GFD DV+V+N L+  Y                             
Sbjct: 128 SLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVA 187

Query: 185 ---ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
              + GD+   R++FD+M E+N+V+W+ +I   A+     +A+ L+F +  EG+  N   
Sbjct: 188 GYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETV 247

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           MV VI++CA L  LELG+R   YI    M  N ++  ALVDMY +CG++D A  +F +  
Sbjct: 248 MVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLP 307

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
            R+ +   T+++ +   G A +AL     M   G  P  +T  + +SA +          
Sbjct: 308 GRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACS---------- 357

Query: 362 CHGYVLRNGLEGWDSICNT------------MIDMYMKCGKQEMACRIFDHMSNKTVVS- 408
            HG ++  GLE ++S+               M+D+  + GK   A +  + M  K     
Sbjct: 358 -HGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPI 416

Query: 409 WNSLIAG--LIKNGDV-ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           W +L+    + KN ++ E A +   E+   +H  +  +L  +       E +E  R M+ 
Sbjct: 417 WGALLGACRIHKNSEIAERAGKTLIELKP-EHSGYYVLLSNIYARTNKWENVENIRQMMK 475

Query: 466 ERIKVDRVTMVGVASACGY 484
           ER         GV    GY
Sbjct: 476 ER---------GVVKPPGY 485


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/729 (35%), Positives = 414/729 (56%), Gaps = 38/729 (5%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCL 179
           EA+  Y  +   G+ PD   F   +  C+ S    +G  +H  I++    + D+ +   L
Sbjct: 41  EALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTAL 100

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE---EGIK 236
           I  Y  C D+   R+ FDEM ++ +V+W +LI   +R    + A+ ++ +MV    EG+K
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+++T    + AC  + ++  G  + A     G  +++++ NAL++MY KCG++++A+++
Sbjct: 161 PDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F   K+R+++  NT++S Y + G A +AL +   M  + P+P+ VT +  ++A   L DL
Sbjct: 221 FDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDL 280

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             GR  H  V  +G E    I N +++MY KC                            
Sbjct: 281 EQGRAIHRKVREDGYESDLVIGNVLLNMYTKC---------------------------- 312

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
             +  +E AR+VF  M  RD I+WN ++    Q    ++A+++F+ M  E +  + +T+ 
Sbjct: 313 --SSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLS 370

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V SAC  LGA    K ++A I       D+ L  +L++M+ RCG     + VF  +  +
Sbjct: 371 NVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDK 430

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
            + +W+  I A A  G+    +E F E+L++G+  D +  V  L+ACSHGG++ +G   F
Sbjct: 431 SLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTF 490

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
            SM   HG++P   H+ CMVDLL RAG L  A +LI  MP  P+ V W SLL+ C+ H +
Sbjct: 491 LSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHND 550

Query: 657 VDIAAYAAERITELDPEKSGVHV-LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
              AA  A+++ EL+ E     V LLSN+YA AG+W +V + R     +  RK PG S I
Sbjct: 551 TKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYI 607

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           E+N  VHEF +GD+SHPE   I++ ++ ++ +++DAGYVPD+  VL +V E+EK+ +L +
Sbjct: 608 EINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCY 667

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+A+GLIST    P+ +VKNLR C DCH+ AK +S++  R+I+VRD+ RFH F  
Sbjct: 668 HSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFEN 727

Query: 836 GSCSCSDFW 844
           GSCSC D+W
Sbjct: 728 GSCSCKDYW 736



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 233/478 (48%), Gaps = 38/478 (7%)

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            YG+CG + D   VF  +   N VSWT ++ A AR    +EA+  +  MV EG++P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
            V  I  C+  ++L+ G  + A I E   ++ + ++  AL+ MY +C  ++ A++ F E 
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP---RPDRVTMLSAVSASAQLGDLL 357
             + LV  N +++ Y R G  R AL I  +M+   P   +PD +T  SA+ A   +GD+ 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            GR      + +G      + N +I+MY KCG  E A ++FD + N+ V++WN++I+G  
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
           K G                                  +A+ELF+ M     K + VT +G
Sbjct: 241 KQGAA-------------------------------TQALELFQRMGPNDPKPNVVTFIG 269

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP-QRAMQVFRRMEKR 536
           + +AC  L  L+  + I+  + ++G   D+ +   L++M+ +C    + A QVF RM  R
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTR 329

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           DV  W   I A    G  + A+++F +M  + + P+ I    VL+AC+  G   QG    
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG-KAV 388

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            ++         +V    ++++  R G L + + +  ++  + + V W +L+AA  +H
Sbjct: 389 HALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQH 445



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 241/489 (49%), Gaps = 42/489 (8%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF---GILPDKF 139
           L  A+K FD   K      TL  +N+LI GYS  G    A+ +Y ++      G+ PD  
Sbjct: 110 LELARKTFDEMGKK-----TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAI 164

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           TF   L ACT      +G ++    V  G+  D  V+N LIN Y +CG +   R+VFD +
Sbjct: 165 TFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL 224

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             R+V++W ++I   A++    +A+ LF  M     KPN VT + +++AC  L++LE G 
Sbjct: 225 KNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            +   + E G +++ ++ N L++MY KC  +++ A+Q+F   + R+++  N ++  YV+ 
Sbjct: 285 AIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQY 344

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G A++AL I  +M L    P+ +T+ + +SA A LG    G+  H  +     +    + 
Sbjct: 345 GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLE 404

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N++++MY +CG  +    +F  + +K++VSW++LIA   ++G   +  E F E       
Sbjct: 405 NSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWE------- 457

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAY 497
                                   +L E +  D VTMV   SAC + G L +  +   + 
Sbjct: 458 ------------------------LLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSM 493

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQ 556
           +  +G+  D +    +VD+ +R G  + A  +   M    D  AWT+ +    +  + ++
Sbjct: 494 VGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKR 553

Query: 557 AVELFNEML 565
           A  + +++ 
Sbjct: 554 AARVADKLF 562



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 6/154 (3%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           +L  +++LI  Y+  G     +  + EL   G+  D  T    L+AC+      EGVQ  
Sbjct: 431 SLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTF 490

Query: 162 GAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARRDL 219
            ++V   G   D     C+++     G +     +  +M    + V+WTSL+  C   + 
Sbjct: 491 LSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHND 550

Query: 220 PKEAVYL---FFEMVEEGIKPNSVTMVCVISACA 250
            K A  +    FE+  E  + ++VT++  + A A
Sbjct: 551 TKRAARVADKLFELESED-EHSTVTLLSNVYAEA 583


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 282/795 (35%), Positives = 435/795 (54%), Gaps = 38/795 (4%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H   +  GLG      + +V   A  G F  +  A+  FD    +  T +    +N L
Sbjct: 121 QLHALAMATGLGGDIFVANALV---AMYGGFGFVDEARMVFDEAGCERNTVS----WNGL 173

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           +  Y        A+ ++ E+   G+ P++F F  V+NACT S     G +VH  +++ G+
Sbjct: 174 MSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGY 233

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           D+DVF  N L++ Y + GDI     VF ++ E +VVSW + I  C      + A+ L  +
Sbjct: 234 DKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQ 293

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M   G+ PN  T+  ++ ACA      LG ++  ++ +    ++  +   LVDMY K G 
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGL 353

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D AK++F     R+LVL N ++S         EAL++   M   G   +R T+ + + +
Sbjct: 354 LDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           +A L  +   R  H    + G      + N +ID Y KC     A R+F+          
Sbjct: 414 TASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFE---------- 463

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                   K+G               D I++ +M+  L+Q +  E+A++LF  ML + + 
Sbjct: 464 --------KHGSY-------------DIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLD 502

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +  + +AC  L A +  K ++A++ K     D+    ALV  +A+CG  + A   
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLA 562

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + ++ V +W+A IG +A  G+G++A+++F+ M+ + I P+ I    VL AC+H GLV
Sbjct: 563 FSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLV 622

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++    F SM ++ G+     HY CM+DLLGRAG L +A++L+ SMP + N  +WG+LLA
Sbjct: 623 DEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLA 682

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           A + H++ ++   AAE++  L+PEKSG HVLL+N YASAG W +VA+VR  MK+  ++K 
Sbjct: 683 ASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKE 742

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           P  S +E+  KVH F  GD+SHP   +I + L E+   +  AGYVP++   L DVD+ EK
Sbjct: 743 PAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEK 802

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + LLSHHSE+LA+AF LIST    PIRV KNLR+C DCH+  K +S +  REII+RD NR
Sbjct: 803 ELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINR 862

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR G+CSC D+W
Sbjct: 863 FHHFRDGACSCRDYW 877



 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 191/666 (28%), Positives = 298/666 (44%), Gaps = 88/666 (13%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGL-----GHKPSYISKVVCTCAQMGTFESLTYAQK 88
           P +      ++L +    H H+LK GL      H  S+ SK    C   G+      A++
Sbjct: 9   PLLTRYAATQSLLQGAHIHAHLLKSGLFAVFRNHLLSFYSK----CRLPGS------ARR 58

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC 148
            FD        S     ++SL+  YS   +  +A+  +  +    +  ++F  P VL  C
Sbjct: 59  VFDEIPDPCHVS-----WSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-C 112

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSW 207
              + FG   Q+H   +  G   D+FV N L+  YG  G + + R VFDE   ERN VSW
Sbjct: 113 APDAGFG--TQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSW 170

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
             L+ A  + D    AV +F EMV  G++PN     CV++AC   ++LE G +V A +  
Sbjct: 171 NGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIR 230

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
            G   +    NALVDMY K G +  A  +FG+  + ++V  N  +S  V  G  + AL +
Sbjct: 231 TGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALEL 290

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           L +M   G  P+  T+ S + A A  G    GR  HG++++   +  + I   ++DMY K
Sbjct: 291 LLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAK 350

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
            G  + A ++FD +  + +V WN+LI+G                  G  H          
Sbjct: 351 HGLLDDAKKVFDWIPQRDLVLWNALISGCSH---------------GAQH---------- 385

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
                  EA+ LF  M  E   V+R T+  V  +   L A+   + ++A  EK G   D 
Sbjct: 386 ------AEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDS 439

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            +   L+D + +C     A +VF +    D+ A+T+ I A++   +GE A++LF EMLR+
Sbjct: 440 HVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRK 499

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQG----WHLFRS--MTDIHGVS--------------- 606
           G+ PD  V   +L AC+      QG     HL +   M+D+   +               
Sbjct: 500 GLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDA 559

Query: 607 -------PQ--IVHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKH 654
                  P+  +V +  M+  L + G    ALD+   M    + PN +   S+L AC   
Sbjct: 560 DLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHA 619

Query: 655 QNVDIA 660
             VD A
Sbjct: 620 GLVDEA 625


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/789 (34%), Positives = 431/789 (54%), Gaps = 48/789 (6%)

Query: 69  KVVCTCAQMGTFESLTYAQKAFDYYIK-----------DNETSATLFMYNSLIRGYSCIG 117
           +V C C + G  + ++      D Y+K           D      +  + SL+ GYS  G
Sbjct: 114 QVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNG 173

Query: 118 LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
           L      L+ ++   G+LP+++T   V+ A       G G+QVH  +VK GF+  + V N
Sbjct: 174 LYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFN 233

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
            LI+ Y   G + D R VFD+M  R+ V+W S+I    R     E   +F +M   G+KP
Sbjct: 234 SLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKP 293

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
             +T   VI +CA L+ L L   +     + G   + +++ AL+    KC  +D A  LF
Sbjct: 294 THMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLF 353

Query: 298 GECKD-RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
              ++ +N+V    ++S  ++ G   +A+ +  +M   G +P+  T  + ++       +
Sbjct: 354 SLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHY---PV 410

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
               M H  V++   E   S+   ++D Y+K G                           
Sbjct: 411 FVSEM-HAEVIKTNYERSSSVGTALLDAYVKLG--------------------------- 442

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
               +   A +VF  +  +D ++W+ ML G  Q    EEA +LF  ++ E IK +  T  
Sbjct: 443 ----NTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFS 498

Query: 477 GVASACGY-LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
            V +AC     A +  K  +AY  K  ++  + +++ALV M+A+ G+   A +VF+R ++
Sbjct: 499 SVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKE 558

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
           RD+ +W + I   +  G  ++A+E+F+EM ++ +  D++ F+GV+TAC+H GLV +G   
Sbjct: 559 RDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKY 618

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           F SM + H ++P + HY CM+DL  RAG+L +A+ +I  MP  P   +W +LL A + H+
Sbjct: 619 FNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHR 678

Query: 656 NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
           NV++   AAE++  L PE S  +VLLSN+YA+AG W     VR  M ++ ++K PG S I
Sbjct: 679 NVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWI 738

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           EV  K + F +GD +HP  N I S L E++ RL+DAGY PD  NV  D+++++K+ +LSH
Sbjct: 739 EVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSH 798

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSE+LA+AFGLI+T   +PI++VKNLR+C DCH+F KLVS V  R I+VRD+NRFH F+ 
Sbjct: 799 HSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKD 858

Query: 836 GSCSCSDFW 844
           G CSC D+W
Sbjct: 859 GLCSCGDYW 867



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 13/251 (5%)

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET-----------SATLFMYNSLI 110
           H P ++S++     +     S +      D Y+K   T           +  L  +++++
Sbjct: 407 HYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAML 466

Query: 111 RGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE-GVQVHGAIVKMGF 169
            GY+  G   EA  L+ +L   GI P++FTF  V+NAC   +A  E G Q H   +KM  
Sbjct: 467 AGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRL 526

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           +  + V + L+  Y + G+I     VF    ER++VSW S+I   ++    K+A+ +F E
Sbjct: 527 NNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDE 586

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVDMYMKCG 288
           M +  +  ++VT + VI+AC     +E G +   + I++  +       + ++D+Y + G
Sbjct: 587 MQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAG 646

Query: 289 AVDTAKQLFGE 299
            ++ A  +  E
Sbjct: 647 MLEKAMGIINE 657


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/621 (42%), Positives = 380/621 (61%), Gaps = 42/621 (6%)

Query: 263 AYIDELGMKANALMVNALVDMYMKCG-----AVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           A I   G   ++ +  +LV  Y         + +++ ++F   +  N+ L N ++   + 
Sbjct: 55  ALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIE 114

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG---- 373
                +A+ +  EM++   RP++ T  + + A +  G +  G   H +++++GL G    
Sbjct: 115 NNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHI 174

Query: 374 ---------------------------WDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKT 405
                                       D++C N MID Y++ G+ E A  +F+ M +++
Sbjct: 175 LSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRS 234

Query: 406 VVS-WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
           ++S WN++I+G  + G VE ARE F EM  RD ISW+ M+ G  QE  F EA+E+F  M 
Sbjct: 235 MISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQ 294

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
            E+I+  +  +  V SAC  LGALD  +WI+ Y ++N I  D  L T+LVDM+A+CG   
Sbjct: 295 KEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRID 354

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A +VF +M  ++VS+W A IG +AM G  E A++LF++M    I P+ I FVGVL AC+
Sbjct: 355 LAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACA 411

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           HGGLV +G  +F SM   +GV PQI HYGC+VDLLGRAGLL EA  ++ S+P EP   +W
Sbjct: 412 HGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVW 471

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
           G+LL AC+KH NV++     + + EL+P+ SG + LLSNIYA AG+W  V  VR  MKE+
Sbjct: 472 GALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKER 531

Query: 705 GIRKLPGSSSIEV-NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
           GI+  PG+S I++  G+VH+F  GD SHP++ +I  ML ++  RL+  GY PD + VL D
Sbjct: 532 GIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFD 591

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           +DE+EK+  +  HSEKLA+ FGLI+TS    IR+VKNLR+C DCHS  KL+S+VY+REII
Sbjct: 592 IDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREII 651

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD  R+H FR G+CSC DFW
Sbjct: 652 VRDRIRYHHFRNGACSCKDFW 672



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 201/483 (41%), Gaps = 108/483 (22%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECG-----DIVDGRRVFDEMSERNVVSWTSLICA 213
           Q H  I++ G  +D ++   L+  Y               RVFD + + NV  W  +I  
Sbjct: 52  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 111

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-------- 265
           C   + P +A+ L++EM+    +PN  T   V+ AC+    +  G +V A++        
Sbjct: 112 CIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 171

Query: 266 ------------------------DELGMKANALMVNALVDMYMK--------------- 286
                                   D+ G + +A+  NA++D Y++               
Sbjct: 172 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMP 231

Query: 287 -----------------CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
                            CG V+ A++ F E K+R+ +  + ++  Y++ G   EAL I  
Sbjct: 232 DRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFH 291

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           +M     RP +  + S +SA A LG L  GR  H Y  RN ++    +  +++DMY KCG
Sbjct: 292 QMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCG 351

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           + ++A  +F+ MSNK V SWN++I GL  +G  E A ++FS+M                 
Sbjct: 352 RIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---------------- 395

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQ 508
                             I  + +T VGV +AC + G +     I+  + K  G+   ++
Sbjct: 396 ------------------INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIE 437

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN---GEQAVELFNEM 564
               +VD+  R G    A +V   +      A W A +GA    GN   GE+  ++  E+
Sbjct: 438 HYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL 497

Query: 565 LRQ 567
             Q
Sbjct: 498 EPQ 500



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFA-----RCGDPQRAMQVFRRMEKRDVSAW 541
           +L   K  +A I + G   D  +A +LV  +A     R    + +++VF  + K +V  W
Sbjct: 46  SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLW 105

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
              I          +A+ L+ EM+    +P+   +  VL ACS  G+V +G  +   +  
Sbjct: 106 NCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK 165

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            HG+          + +    G L EA  ++     E + V W +++    +   V+   
Sbjct: 166 -HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE--- 221

Query: 662 YAAERITELDPEKS 675
            AA  + E  P++S
Sbjct: 222 -AARELFEGMPDRS 234


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 304/825 (36%), Positives = 430/825 (52%), Gaps = 104/825 (12%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCL 179
           EAIS Y+E+   G  PD F FP VL A +       G Q+H A VK G+    V V N L
Sbjct: 75  EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTL 134

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           +N YG+CG I D  +VFD +++R+ VSW S I A  R +  ++A+  F  M  E ++ +S
Sbjct: 135 VNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSS 194

Query: 240 VTMVCVISACAKL---QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            T+V V  AC+ L     L LG ++  Y   +G        NAL+ MY K G VD +K L
Sbjct: 195 FTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKAL 253

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F    DR++V  NT++S++ +     EALA    M+L G   D VT+ S + A + L  L
Sbjct: 254 FESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERL 313

Query: 357 LCGRMCHGYVLRN-------------------------GLEGWDSIC-------NTMIDM 384
             G+  H YVLRN                         G   +D I        N MI  
Sbjct: 314 DVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISG 373

Query: 385 YMKCGKQEMACRIFDHM--------------------------SNKTVVS---------- 408
           Y + G  E A  +F  M                          SNK  +           
Sbjct: 374 YARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKE 433

Query: 409 ----WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                N+L+    + G ++ +  +F  M  RD +SWNTM+ G      +  A+ L   M 
Sbjct: 434 DRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEM- 492

Query: 465 SERI-------------------KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
            +R+                   K + +T++ V   C  L A+   K I+AY  +N +  
Sbjct: 493 -QRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLAS 551

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D+ + +ALVDM+A+CG    + +VF  M  ++V  W   I A  M G GE+A+ELF  M+
Sbjct: 552 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 611

Query: 566 RQG-----IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
            +       KP+ + F+ V  ACSH GL+++G +LF  M   HGV P   HY C+VDLLG
Sbjct: 612 AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 671

Query: 621 RAGLLGEALDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           RAG L EA +L+ +MP E + V  W SLL AC+ HQNV++   AA+ +  L+P  +  +V
Sbjct: 672 RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYV 731

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSNIY+SAG W     VR  M++ G++K PG S IE   +VH+F +GD SHP+   +  
Sbjct: 732 LLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHG 791

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L  ++ ++R  GYVPD + VL +VDE EK+ LL  HSEKLA+AFG+++T     IRV K
Sbjct: 792 FLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAK 851

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+  K +SK+ +REIIVRD  RFH F++G+CSC D+W
Sbjct: 852 NLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 213/459 (46%), Gaps = 52/459 (11%)

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R+  SW   + +  R +  +EA+  + EM   G +P++     V+ A + LQ+L+ G+++
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 262 CAYIDELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
            A   + G  ++++ V N LV+MY KCG +    ++F    DR+ V  N+ ++   R   
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLG---DLLCGRMCHGYVLRNGLEGWDSI 377
             +AL     M +        T++S   A + LG    L  G+  HGY LR G +     
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N ++ MY K G+ + +  +F+   ++ +VSW                            
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSW---------------------------- 265

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
              NTM+   +Q + F EA+  FR+M+ E +++D VT+  V  AC +L  LD+ K I+AY
Sbjct: 266 ---NTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAY 322

Query: 498 IEKNGIHCDMQ-LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           + +N    +   + +ALVDM+  C   +   +VF  +  R +  W A I   A  G  E+
Sbjct: 323 VLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEK 382

Query: 557 AVELFNEMLR-QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH---- 611
           A+ LF EM++  G+ P++     V+ AC H          F +   IHG + ++      
Sbjct: 383 ALILFIEMIKVAGLLPNTTTMASVMPACVH-------CEAFSNKESIHGYAVKLGFKEDR 435

Query: 612 --YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
                ++D+  R G +  +  +  SM V  + V W +++
Sbjct: 436 YVQNALMDMYSRMGKMDISETIFDSMEVR-DRVSWNTMI 473



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 11/224 (4%)

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           P R   SW   L   T+ N F EA+  +  M     + D      V  A   L  L   +
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 493 WIYAYIEKNGI-HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
            I+A   K G     + +A  LV+M+ +CG      +VF R+  RD  +W + I A+   
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI-- 609
              EQA+E F  M  + ++  S   V V  ACS+ G++    H  R    +HG S ++  
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM----HGLRLGKQLHGYSLRVGD 228

Query: 610 ---VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
                   ++ +  + G + ++  L +S  V+ + V W +++++
Sbjct: 229 QKTFTNNALMAMYAKLGRVDDSKALFESF-VDRDMVSWNTMISS 271


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/706 (38%), Positives = 400/706 (56%), Gaps = 33/706 (4%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           TF  +L  C   +    G  VH  +   G   +      L N Y +C    D RRVFD M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELG 258
             R+ V+W +L+   AR  L + AV +   M EE G +P++VT+V V+ ACA  Q L   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             V A+    G      +  A++D+Y KCGAVD+A+++F   +DRN V  N ++  Y   
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G A EALA+   M+  G     V++L+A+ A  +LG L  GR  H  ++R GLE   ++ 
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N +I MY KC + ++A ++FD                               E+  +  +
Sbjct: 467 NALITMYCKCKRTDLAAQVFD-------------------------------ELGYKTRV 495

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN M+ G TQ    E+A+ LF  M  E +K D  T+V +  A   +     A+WI+ Y 
Sbjct: 496 SWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYS 555

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            +  +  D+ + TAL+DM+A+CG    A  +F     R V  W A I      G+G+ AV
Sbjct: 556 IRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAV 615

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           ELF EM   G  P+   F+ VL+ACSH GLV++G   F SM + +G+ P + HYG MVDL
Sbjct: 616 ELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDL 675

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAG L EA   I+ MP+EP   ++G++L AC+ H+NV++A  +A+RI EL+PE+   H
Sbjct: 676 LGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYH 735

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLL+NIYA+A  W +VARVR  M+++G++K PG S +++  ++H F SG  +H +  +I 
Sbjct: 736 VLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIY 795

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
           + L ++   ++  GYVPD T+ + DV++  K  LL+ HSEKLA+A+GLI T+    I++ 
Sbjct: 796 ARLAKLIEEIKAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIK 854

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH+  KL+S V  REII+RD  RFH F+ G CSC D+W
Sbjct: 855 KNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 253/552 (45%), Gaps = 54/552 (9%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGF-GILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           +N+L+ GY+  GL   A+ + V +    G  PD  T   VL AC  + A G   +VH   
Sbjct: 294 WNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFA 353

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           V+ GFD  V V   +++ Y +CG +   R+VFD M +RN VSW ++I   A      EA+
Sbjct: 354 VRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEAL 413

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            LF  MV EG+    V+++  + AC +L  L+ G RV   +  +G+++N  ++NAL+ MY
Sbjct: 414 ALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMY 473

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KC   D A Q+F E   +  V  N ++    + G + +A+ +   M L   +PD  T++
Sbjct: 474 CKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLV 533

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A A + D L  R  HGY +R  L+    +   +IDMY KCG+  +A  +F+   ++
Sbjct: 534 SIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR 593

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V++WN++I G   +G  + A E+F EM     +   T                      
Sbjct: 594 HVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNET---------------------- 631

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDP 523
                    T + V SAC + G +D  +  ++ ++++ G+   M+    +VD+  R G  
Sbjct: 632 ---------TFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKL 682

Query: 524 QRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF------ 576
             A    ++M  +  +S + A +GA  +  N E A E    +    ++P+  V+      
Sbjct: 683 HEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFE--LEPEEGVYHVLLAN 740

Query: 577 -----------VGVLTACSHGGLVNQ-GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
                        V TA    GL    GW + +   +IH       ++    D+  R   
Sbjct: 741 IYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAK 800

Query: 625 LGEALDLIKSMP 636
           L E +  +  +P
Sbjct: 801 LIEEIKAVGYVP 812



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 212/489 (43%), Gaps = 77/489 (15%)

Query: 210 LICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           L  A +R DL + A+  F  M    G  P   T   ++  CA   +L  G  V A +   
Sbjct: 196 LRAAASRSDL-RGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAAR 254

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G+   AL   AL +MY KC     A+++F     R+ V  N +++ Y R GLA  A+ ++
Sbjct: 255 GLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMV 314

Query: 329 DEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             M    G RPD VT++S + A A    L   R  H + +R G +   ++   ++D+Y K
Sbjct: 315 VRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCK 374

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  + A ++FD M ++  VSWN++I G  +NGD                          
Sbjct: 375 CGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDA------------------------- 409

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
                  EA+ LF+ M+ E + V  V+++    ACG LG LD  + ++  + + G+  ++
Sbjct: 410 ------TEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNV 463

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            +  AL+ M+ +C     A QVF  +  +   +W A I      G+ E AV LF+ M  +
Sbjct: 464 NVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLE 523

Query: 568 GIKPDSIVFVGVLTACS-----------HG------------------------GLVNQG 592
            +KPDS   V ++ A +           HG                        G V+  
Sbjct: 524 NVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIA 583

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLA 649
             LF S  D H     ++ +  M+   G  G    A++L + M      PN+  + S+L+
Sbjct: 584 RSLFNSARDRH-----VITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLS 638

Query: 650 ACQKHQNVD 658
           AC     VD
Sbjct: 639 ACSHAGLVD 647



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 1/193 (0%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T   +N++I G +  G   +A+ L+  +    + PD FT   ++ A    S   +   +H
Sbjct: 493 TRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIH 552

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G  +++  D+DV+V   LI+ Y +CG +   R +F+   +R+V++W ++I         K
Sbjct: 553 GYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGK 612

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALMVNAL 280
            AV LF EM   G  PN  T + V+SAC+    ++ G    + + E  G++        +
Sbjct: 613 VAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTM 672

Query: 281 VDMYMKCGAVDTA 293
           VD+  + G +  A
Sbjct: 673 VDLLGRAGKLHEA 685


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/671 (39%), Positives = 398/671 (59%), Gaps = 5/671 (0%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKP 237
            I  Y   GD+   R +FD++ + ++ +WT LI A  +     EA+  + +   +  ++P
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           + + ++ V  ACA L+++    RV       G  ++ L+ NAL+DMY KC   + A+ +F
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
                R+++   ++ S YV  GL REAL    +M L+G RP+ VT+ S + A   L DL 
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            GR  HG+V+RNG+ G   + + +++MY  C     A  +FD MS +  VSWN LI    
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 418 KNGDVESAREVF----SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            N + E    VF    SE  G ++ SWN ++GG  Q    E+A+E+   M +   K +++
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T+  V  AC  L +L   K I+ YI ++    D+   TALV M+A+CGD + + +VF  M
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
            KRD  +W   I A +M GNGE+A+ LF EM+  G++P+S+ F GVL+ CSH  LV++G 
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
            +F SM+  H V P   H+ CMVD+L RAG L EA + IK MP+EP    WG+LL  C+ 
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           ++NV++   AA R+ E++ +  G +VLLSNI  SA  W+  +  R  M+++G+ K PG S
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            I+V  +VH F  GD+S+ + + I   L  M  ++R AGY+P+   VL DVD++EK+ +L
Sbjct: 557 WIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVL 616

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
            +HSEKLA+AFG+++ +    IRV KNLR+C DCH+  K ++K+   +IIVRD+ RFH F
Sbjct: 617 CNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHF 676

Query: 834 RQGSCSCSDFW 844
           R G CSC DFW
Sbjct: 677 RDGLCSCQDFW 687



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 217/501 (43%), Gaps = 69/501 (13%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKS 151
           ++ D      L  +  LI   +  G  +EAI  Y +      + PDK     V  AC   
Sbjct: 32  HLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASL 91

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
                  +VH   ++ GF  DV + N LI+ YG+C      R VF+ M  R+V+SWTS+ 
Sbjct: 92  RDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMA 151

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
                  L +EA+  F +M   G +PNSVT+  ++ AC  L++L+ G  V  ++   GM 
Sbjct: 152 SCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMG 211

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY---------------- 315
            N  + +ALV+MY  C ++  A+ +F     R+ V  N +++ Y                
Sbjct: 212 GNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRM 271

Query: 316 -------------------VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
                              ++ G   +AL +L  M   G +P+++T+ S + A   L  L
Sbjct: 272 MSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESL 331

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G+  HGY+ R+      +    ++ MY KCG  E++ R+F  M+ +  VSWN++I   
Sbjct: 332 RGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIAT 391

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
             +G+                                EEA+ LFR M+   ++ + VT  
Sbjct: 392 SMHGNG-------------------------------EEALLLFREMVDSGVRPNSVTFT 420

Query: 477 GVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME- 534
           GV S C +   +D    I+  + ++  +  D    + +VD+ +R G  + A +  ++M  
Sbjct: 421 GVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPI 480

Query: 535 KRDVSAWTAAIGAMAMEGNGE 555
           +    AW A +G   +  N E
Sbjct: 481 EPTAGAWGALLGGCRVYKNVE 501



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 34/178 (19%)

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            LA   + +++  GD QRA  +F ++ + D+  WT  I A+   G   +A++ +N+   +
Sbjct: 12  HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71

Query: 568 G-IKPDSIVFVGVLTACS-----------HGGLVNQGW----HLFRSMTDIHGVS----- 606
             ++PD ++ + V  AC+           H   +  G+     L  ++ D++G       
Sbjct: 72  NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131

Query: 607 ----------PQIVHYGCMVDLLGRAGLLGEALDLIKSMPV---EPNDVIWGSLLAAC 651
                       ++ +  M       GLL EAL   + M +    PN V   S+L AC
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPAC 189


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/752 (35%), Positives = 427/752 (56%), Gaps = 37/752 (4%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           +S  L  +++++  ++   +G  A+  +V++   G  P+++ F     AC+ +     G 
Sbjct: 129 SSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGD 188

Query: 159 QVHGAIVKMGF-DRDVFVENCLIN-FYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
            + G +VK G+   DV V   LI+ F    GD+V   +VF++M ERN V+WT +I    +
Sbjct: 189 SIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQ 248

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
                EA+ LF EM+  G +P+  T+  VISACA ++ L LG ++ +     G+  +  +
Sbjct: 249 FGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCV 308

Query: 277 VNALVDMYMKC---GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG-LAREALAILDEML 332
              L++MY KC   G++  A+++F +  D N+     +++ YV+ G    EAL +   M+
Sbjct: 309 GCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMI 368

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           L    P+  T  S + A A L  L  G     + ++ G    + + N++I MY + G+  
Sbjct: 369 LTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR-- 426

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
                                        ++ AR+ F  +  ++ IS+NT++    +   
Sbjct: 427 -----------------------------IDDARKAFDILFEKNLISYNTVIDAYAKNLN 457

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            EEA+ELF  +  + +     T   + S    +G +   + I+A + K+G+  +  +  A
Sbjct: 458 SEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNA 517

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+ M++RCG+ + A QVF  ME R+V +WT+ I   A  G   QA+ELF++ML +G++P+
Sbjct: 518 LISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPN 577

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + ++ VL+ACSH GLVN+GW  F+SM   HGV P++ HY CMVD+LGR+G L EA+  I
Sbjct: 578 LVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFI 637

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
            SMP + + ++W + L AC+ H N+++  +AA+ I E +P     ++LLSN+YAS  KW 
Sbjct: 638 NSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWD 697

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            V+ +R  MKE+ + K  G S +EV  KVH+F  GD SHP+   I   L+ ++ +++  G
Sbjct: 698 EVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLG 757

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           YVP+L  VL DV+E++K+ LL  HSEK+A+AFGLISTSK  PIRV KNLR+C DCHS  K
Sbjct: 758 YVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIK 817

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S    REIIVRD NRFH  + G CSC+++W
Sbjct: 818 YISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 248/519 (47%), Gaps = 50/519 (9%)

Query: 59  GLGHKPSYISKVVCT-CAQMGTF----ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGY 113
           G   K  Y+   VC  C  +  F      L  A K F+   + N  + TL +   +  GY
Sbjct: 192 GFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGY 251

Query: 114 SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDV 173
           +      EAI L++E+   G  PD+FT   V++AC        G Q+H   ++ G   D 
Sbjct: 252 AG-----EAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306

Query: 174 FVENCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARRD-LPKEAVYLFFE 229
            V  CLIN Y +C   G +   R++FD++ + NV SWT++I    ++    +EA+ LF  
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+   + PN  T    + ACA L  L +G++V  +  +LG  +   + N+L+ MY + G 
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR 426

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A++ F    ++NL+  NT++  Y +   + EAL + +E+   G      T  S +S 
Sbjct: 427 IDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSG 486

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           +A +G +  G   H  V+++GL+   S+CN +I MY +CG  E A ++F+ M ++ V+SW
Sbjct: 487 AASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISW 546

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            S+I G  K+G                                  +A+ELF  ML E ++
Sbjct: 547 TSIITGFAKHG-------------------------------FATQALELFHKMLEEGVR 575

Query: 470 VDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
            + VT + V SAC ++G ++   K   +   ++G+   M+    +VD+  R G    A+Q
Sbjct: 576 PNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQ 635

Query: 529 VFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNE 563
               M  K D   W   +GA  + GN   G+ A ++  E
Sbjct: 636 FINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIE 674



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 252/540 (46%), Gaps = 38/540 (7%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +AIS    +   G  PD  T+   L  C ++ +F  G  VH  + +     D    N LI
Sbjct: 49  KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108

Query: 181 NFYGECGDIVDGRRVFDEM-SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           + Y +CG       +F  M S R+++SW++++   A  ++   A+  F +M+E G  PN 
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNALVDMYMKC-GAVDTAKQLF 297
                   AC+  + + +GD +  ++ + G ++++  +   L+DM++K  G + +A ++F
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
            +  +RN V    +++  ++ G A EA+ +  EM+L G  PDR T+   +SA A +  LL
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLL 288

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC---RIFDHMSNKTVVSWNSLIA 414
            G+  H   +R+GL     +   +I+MY KC      C   +IFD + +  V SW ++I 
Sbjct: 289 LGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMIT 348

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G ++ G             G D                 EEA++LFR M+   +  +  T
Sbjct: 349 GYVQKG-------------GYD-----------------EEALDLFRGMILTHVIPNHFT 378

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
                 AC  L AL + + ++ +  K G      +A +L+ M+AR G    A + F  + 
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           ++++ ++   I A A   N E+A+ELFNE+  QG+   +  F  +L+  +  G + +G  
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ 498

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +   +    G+         ++ +  R G +  A  + + M  + N + W S++    KH
Sbjct: 499 IHARVIK-SGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 211/461 (45%), Gaps = 41/461 (8%)

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           +A+     MV +G  P+  T    +  C + ++ ++G  V   + +  ++ +++ +N+L+
Sbjct: 49  KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108

Query: 282 DMYMKCGAVDTAKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
            +Y KCG  + A  +F      R+L+  + ++S +    +   AL    +M+ +G  P+ 
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFD 399
               +A  A +    +  G    G+V++ G L+    +   +IDM++K            
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVK------------ 216

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                               GD+ SA +VF +MP R+ ++W  M+  L Q     EA++L
Sbjct: 217 ------------------GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDL 258

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M+    + DR T+ GV SAC  +  L L + +++   ++G+  D  +   L++M+A+
Sbjct: 259 FLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAK 318

Query: 520 C---GDPQRAMQVFRRMEKRDVSAWTAAI-GAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           C   G    A ++F ++   +V +WTA I G +   G  E+A++LF  M+   + P+   
Sbjct: 319 CSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFT 378

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F   L AC++   +  G  +F     + G S        ++ +  R+G + +A      +
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRIDDARKAFDIL 437

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
             E N + + +++ A  K+ N   +  A E   E++ +  G
Sbjct: 438 -FEKNLISYNTVIDAYAKNLN---SEEALELFNEIEDQGMG 474


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/621 (42%), Positives = 380/621 (61%), Gaps = 42/621 (6%)

Query: 263 AYIDELGMKANALMVNALVDMYMKCG-----AVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           A I   G   ++ +  +LV  Y         + +++ ++F   +  N+ L N ++   + 
Sbjct: 56  ALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIE 115

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG---- 373
                +A+ +  EM++   RP++ T  + + A +  G +  G   H +++++GL G    
Sbjct: 116 NNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHI 175

Query: 374 ---------------------------WDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKT 405
                                       D++C N MID Y++ G+ E A  +F+ M +++
Sbjct: 176 LSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRS 235

Query: 406 VVS-WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
           ++S WN++I+G  + G VE ARE F EM  RD ISW+ M+ G  QE  F EA+E+F  M 
Sbjct: 236 MISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQ 295

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
            E+I+  +  +  V SAC  LGALD  +WI+ Y ++N I  D  L T+LVDM+A+CG   
Sbjct: 296 KEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRID 355

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A +VF +M  ++VS+W A IG +AM G  E A++LF++M    I P+ I FVGVL AC+
Sbjct: 356 LAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACA 412

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           HGGLV +G  +F SM   +GV PQI HYGC+VDLLGRAGLL EA  ++ S+P EP   +W
Sbjct: 413 HGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVW 472

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
           G+LL AC+KH NV++     + + EL+P+ SG + LLSNIYA AG+W  V  VR  MKE+
Sbjct: 473 GALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKER 532

Query: 705 GIRKLPGSSSIEV-NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
           GI+  PG+S I++  G+VH+F  GD SHP++ +I  ML ++  RL+  GY PD + VL D
Sbjct: 533 GIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFD 592

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           +DE+EK+  +  HSEKLA+ FGLI+TS    IR+VKNLR+C DCHS  KL+S+VY+REII
Sbjct: 593 IDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREII 652

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD  R+H FR G+CSC DFW
Sbjct: 653 VRDRIRYHHFRNGACSCKDFW 673



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 123/529 (23%), Positives = 222/529 (41%), Gaps = 86/529 (16%)

Query: 24  HKAKTTPKDSPSIGSLKNCK---TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           H  +T+     +I  L N +   +L+ LKQ H  IL+ G          +V + A + T 
Sbjct: 24  HSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTN 83

Query: 81  ESLTYAQ--KAFDYYIKDNETSATLFMYNSLIRGYSCI--GLGVEAISLYVELAGFGILP 136
             L++    + FD+  K N     +F++N +I+   CI      +AI LY E+      P
Sbjct: 84  RYLSFESSLRVFDFVRKPN-----VFLWNCMIK--VCIENNEPFKAILLYYEMVVAHSRP 136

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           +K+T+P VL AC+ S    EGVQVH  +VK G   D  + +  I  Y   G +V+ RR+ 
Sbjct: 137 NKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRIL 196

Query: 197 DE--------------------------------MSERNVVS-WTSLICACARRDLPKEA 223
           D+                                M +R+++S W ++I   +R  + + A
Sbjct: 197 DDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVA 256

Query: 224 VYLFFEMVE-------------------------------EGIKPNSVTMVCVISACAKL 252
              F EM E                               E I+P    +  V+SACA L
Sbjct: 257 REFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANL 316

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             L+ G  +  Y     ++ + ++  +LVDMY KCG +D A ++F +  ++ +   N ++
Sbjct: 317 GALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMI 376

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GL 371
                 G A +A+ +  +M ++   P+ +T +  ++A A  G +  G      + +  G+
Sbjct: 377 GGLAMHGRAEDAIDLFSKMDIY---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGV 433

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHM-SNKTVVSWNSLIAGLIKNGDVESAREV-- 428
           E        ++D+  + G    A ++   + +  T   W +L+    K+G+VE    V  
Sbjct: 434 EPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGK 493

Query: 429 -FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
              E+  ++   +  +     +   +EE  E+ ++M    IK    T +
Sbjct: 494 ILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSI 542


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/803 (33%), Positives = 438/803 (54%), Gaps = 39/803 (4%)

Query: 42   CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
            C  L   KQ H   +K G        S +V   A+ G    +  A++ F    K N  S 
Sbjct: 242  CLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCG---EMVLAERVFLCMPKQNAVS- 297

Query: 102  TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
                +N+L+ G++ +G   + ++L+  + G  I   KFT   VL  C  S     G  VH
Sbjct: 298  ----WNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVH 353

Query: 162  GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
               +++G + D F+  CL++ Y +CG   D  +VF  + + +VVSW+++I    ++   +
Sbjct: 354  SLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSR 413

Query: 222  EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            EA  +F  M   G+ PN  T+  ++SA   L +L  G+ + A + + G + +  + NALV
Sbjct: 414  EAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALV 473

Query: 282  DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
             MYMK G+V    ++F    +R+L+  N ++S +         L I ++ML  G  P+  
Sbjct: 474  TMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMY 533

Query: 342  TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
            T +S + + + L D+  G+  H  +++N L+G D +   ++DMY K              
Sbjct: 534  TFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAK-------------- 579

Query: 402  SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                             N  +E A  +F+ +  RD  +W  ++ G  Q+   E+A++ F 
Sbjct: 580  -----------------NRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFI 622

Query: 462  VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
             M  E +K +  T+    S C  +  LD  + +++   K G   DM +A+ALVDM+A+CG
Sbjct: 623  QMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCG 682

Query: 522  DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
              + A  VF  +  RD  +W   I   +  G G +A++ F  ML +G  PD + F+GVL+
Sbjct: 683  CVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLS 742

Query: 582  ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
            ACSH GL+ +G   F S++ I+G++P I HY CMVD+LGRAG   E    I+ M +  N 
Sbjct: 743  ACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNV 802

Query: 642  VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            +IW ++L AC+ H N++    AA ++ EL+PE    ++LLSN++A+ G W +V  VR  M
Sbjct: 803  LIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALM 862

Query: 702  KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
              +G++K PG S +EVNG+VH F S D SHP++  I   L++++ +L   GY P+  +VL
Sbjct: 863  STRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVL 922

Query: 762  LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
             +V ++EK+ LL +HSE+LA+AF L+STS    IR+ KNLR+C DCH F K +S++ ++E
Sbjct: 923  HNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQE 982

Query: 822  IIVRDNNRFHFFRQGSCSCSDFW 844
            ++VRD N FH F+ GSCSC +FW
Sbjct: 983  LVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 180/621 (28%), Positives = 305/621 (49%), Gaps = 44/621 (7%)

Query: 37  GSLKNCKT---LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           G L+ C +   LNE K  H  ++K G+       + +V   A+ G   S  YA K F   
Sbjct: 133 GMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG---SANYACKVFGEI 189

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
            + +  S     + +LI G+   G G  A++L+ E+   G+  ++FT+   L AC+    
Sbjct: 190 PERDVVS-----WTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLD 244

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G QVH   +K+G   D+FV + L++ Y +CG++V   RVF  M ++N VSW +L+  
Sbjct: 245 LEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNG 304

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A+    ++ + LF  M    I  +  T+  V+  CA   NL  G  V +    +G + +
Sbjct: 305 FAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELD 364

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +   LVDMY KCG    A ++F   +D ++V  + I++   + G +REA  +   M  
Sbjct: 365 EFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRH 424

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  P++ T+ S VSA+  LGDL  G   H  V + G E  +++CN ++ MYMK G  + 
Sbjct: 425 SGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQD 484

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
            CR+F+  +N+ ++SWN+L++G   N   ++   +F++                      
Sbjct: 485 GCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQ---------------------- 522

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
                    ML+E    +  T + +  +C  L  +DL K ++A I KN +  +  + TAL
Sbjct: 523 ---------MLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTAL 573

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VDM+A+    + A  +F R+ KRD+ AWT  +   A +G GE+AV+ F +M R+G+KP+ 
Sbjct: 574 VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNE 633

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
                 L+ CS    ++ G  L  SM    G S  +     +VD+  + G + +A +++ 
Sbjct: 634 FTLASSLSGCSRIATLDSGRQL-HSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVF 691

Query: 634 SMPVEPNDVIWGSLLAACQKH 654
              V  + V W +++    +H
Sbjct: 692 DGLVSRDTVSWNTIICGYSQH 712


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 274/739 (37%), Positives = 410/739 (55%), Gaps = 31/739 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +LI GY+     +EA  L+  L G G   + F F  VL           G  VHG ++
Sbjct: 14  FVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVL 73

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G+  + F+   LI+ Y   G +   R VFDE+S +++VSWT +I + A  D   EA+ 
Sbjct: 74  KVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALE 133

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F +M   G KPN+ T   V+ AC  LQN + G  V   + +   + +  +   L+++Y 
Sbjct: 134 FFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYT 193

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           +CG  D A + FG+    +++  + ++S + + G + +AL I  +M      P++ T  S
Sbjct: 194 RCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSS 253

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + ASA +  L   +  HG+ L+ GL     + N ++  Y KCG     C          
Sbjct: 254 VLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCG-----C---------- 298

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                           +E + E+F  +  R+ +SWNT++    Q    E A+ LF  ML 
Sbjct: 299 ----------------IEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLR 342

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
            +++   VT   +  AC  L AL+L   ++    K     D+ +  AL+DM+A+CG  + 
Sbjct: 343 YQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKD 402

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A  +F  ++ RD  +W A I   +M G G +A+++FN M     KPD + FVGVL+ACS+
Sbjct: 403 ARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSN 462

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G +++G   F SM   +G+ P + HY CMV L+GR+G L +A+  I+ +P EP+ +IW 
Sbjct: 463 TGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWR 522

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC  H +V++   +A+R+ EL+P     HVLLSNIYA A +W NVA VR  MK +G
Sbjct: 523 ALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKG 582

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K PG S IE  G VH FT  D SH ++  I+ ML  +N + R AGY P L  VLLDV+
Sbjct: 583 VKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVE 642

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           + EK+ LL  HSE+LA+AFGL+      PIR++KNLR+C DCHS  KL+SK+  R+IIVR
Sbjct: 643 DDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVR 702

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH F  GSCSC+D+W
Sbjct: 703 DMNRFHHFENGSCSCADYW 721



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 225/465 (48%), Gaps = 35/465 (7%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           + D  +S  +  +  +I  Y+      EA+  + ++   G  P+ FTF  VL AC     
Sbjct: 103 VFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQN 162

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
           F  G  VH +++K  ++RD++V   L+  Y  CGD  D  R F +M + +V+ W+ +I  
Sbjct: 163 FDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISR 222

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A+    ++A+ +F +M    + PN  T   V+ A A +++L+L   +  +  + G+  +
Sbjct: 223 FAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTD 282

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             + NAL+  Y KCG ++ + +LF    DRN V  NTI+ +YV+LG    AL++   ML 
Sbjct: 283 VFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLR 342

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQE 392
           +  +   VT  S + A A L  L  G   H    +  + G D ++ N +IDMY KCG  +
Sbjct: 343 YQVQATEVTYSSILRACATLAALELGLQVHCLTAKT-IYGQDVAVGNALIDMYAKCGSIK 401

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +FD +  +  VSWN++I G   +G                       LG       
Sbjct: 402 DARFMFDMLDLRDKVSWNAIICGYSMHG-----------------------LG------- 431

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLAT 511
             EA+++F +M   + K D +T VGV SAC   G LD  K  +  ++++ GI   M+  T
Sbjct: 432 -VEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYT 490

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
            +V +  R G+  +A++    +  +  V  W A +GA  +  + E
Sbjct: 491 CMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVE 535



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 4/223 (1%)

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           VF EMP R+ +S+ T++ G  Q N F EA ELF  +  E  +++      V      +  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            +L + ++  + K G   +  + TAL+D ++  G    A +VF  +  +D+ +WT  I +
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            A      +A+E F++M   G KP++  F GVL AC      + G  +  S+   +    
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLA 649
             V  G +++L  R G   +A      MP   NDVI W  +++
Sbjct: 182 LYVGVG-LLELYTRCGDNDDAWRAFGDMP--KNDVIPWSFMIS 221


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/721 (36%), Positives = 411/721 (57%), Gaps = 67/721 (9%)

Query: 160 VHGAIVKMGFDRDVFVENCLINF---YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           +H  ++K G     +  + LI F         +     VF+ + E N++ W ++    A 
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
              P  A+YL+  M+  G+ PN  T   ++ +CAK +    G ++  ++ +LG   +  +
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVL----------------------------- 307
             +L+ MY++ G ++ A+++F +   R++V                              
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 308 --CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
              N ++S Y   G  +EAL +  EM+    RPD  TM+S VSA AQ   +  GR  H +
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +  +G      I N +ID+Y+KCG                               +VE+A
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCG-------------------------------EVETA 274

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
             +F  +  +D ISWNT++GG T  N+++EA+ LF+ ML      + VTM+ +  AC +L
Sbjct: 275 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 334

Query: 486 GALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           GA+++ +WI+ YI K   G+       T+L+DM+A+CGD + A QVF  +  R +S+W A
Sbjct: 335 GAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA 394

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I   AM G    A ++F+ M +  I+PD I FVG+L+ACSH G+++ G H+FRSM + +
Sbjct: 395 MIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDY 454

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
            ++P++ HYGCM+DLLG +GL  EA ++I +M +EP+ VIW SLL AC+ H NV++    
Sbjct: 455 KITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESY 514

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
           A+ + +++P+  G +VLLSNIYA+AG+W  VA++R  + ++G++K+PG SSIE++  VHE
Sbjct: 515 AQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHE 574

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F  GD+ HP    I  ML EM   L +AG+VPD + VL +++E+ K+  L HHSEKLA+A
Sbjct: 575 FIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 634

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           FGLIST     + +VKNLR+C +CH   KL+SK+Y REII RD  RFH FR G CSC+D+
Sbjct: 635 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 694

Query: 844 W 844
           W
Sbjct: 695 W 695



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 183/575 (31%), Positives = 302/575 (52%), Gaps = 72/575 (12%)

Query: 46  NELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           + L+  H  ++K GL +    +SK++  C     F+ L YA   F+   + N     L +
Sbjct: 1   SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPN-----LLI 55

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++ RG++     V A+ LYV +   G+LP+ +TFPF+L +C KS AF EG Q+HG ++
Sbjct: 56  WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR-------- 217
           K+G+D D++V   LI+ Y + G + D R+VFD+ S R+VVS+T+LI   A +        
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 175

Query: 218 ---DLP--------------------KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
              ++P                    KEA+ LF EM++  ++P+  TMV V+SACA+  +
Sbjct: 176 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           +ELG +V ++ID+ G  +N  +VNAL+D+Y+KCG V+TA  LF     ++++  NT++  
Sbjct: 236 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG 295

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR--NGLE 372
           Y  + L +EAL +  EML  G  P+ VTMLS + A A LG +  GR  H Y+ +   G+ 
Sbjct: 296 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVA 355

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
              S   ++IDMY KCG  E A ++FD + N+++ SWN++I G   +G   +A ++FS M
Sbjct: 356 NASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 415

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
              +                               I+ D +T VG+ SAC + G LDL +
Sbjct: 416 RKNE-------------------------------IEPDDITFVGLLSACSHSGMLDLGR 444

Query: 493 WIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAM 550
            I+  ++++  I   ++    ++D+    G  + A ++   ME + D   W + + A  M
Sbjct: 445 HIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 504

Query: 551 EGNGEQAVELFNEMLRQGIK-PDSIVFVGVLTACS 584
            GN E        +++   K P S V +  + A +
Sbjct: 505 HGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 539


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/729 (35%), Positives = 415/729 (56%), Gaps = 38/729 (5%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCL 179
           EA+  Y  +   G+ PD   F   +  C+ S    +G  +H  I++    + D+ +   L
Sbjct: 41  EALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTAL 100

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE---EGIK 236
           I  Y  C D+   R+ FDEM ++ +V+W +LI   +R    + A+ ++ +MV    EG+K
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+++T    + AC+ + ++  G  + A     G  +++++ NAL++MY KCG++++A+++
Sbjct: 161 PDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F   K+R+++  NT++S Y + G A +AL +   M  + P+P+ VT +  ++A   L DL
Sbjct: 221 FDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDL 280

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             GR  H  V  +G E    I N +++MY KC                            
Sbjct: 281 EQGRAIHRKVKEHGYESDLVIGNVLLNMYTKC---------------------------- 312

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
             +  +E AR+VF  +  RD I+WN ++    Q    ++A+++F+ M  E +  + +T+ 
Sbjct: 313 --SSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLS 370

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V SAC  LGA    K ++A I       D+ L  +L++M+ RCG     + VF  +  +
Sbjct: 371 NVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDK 430

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
            + +W+  I A A  G+    +E F E+L++G+  D +  V  L+ACSHGG++ +G   F
Sbjct: 431 SLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSF 490

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
            SM   HG++P   H+ CMVDLL RAG L  A +LI  MP  P+ V W SLL+ C+ H +
Sbjct: 491 LSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHND 550

Query: 657 VDIAAYAAERITELDPEKSGVHV-LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
              AA  A+++ EL+ E     V LLSN+YA AG+W +V + R     +  RK PG S I
Sbjct: 551 TKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYI 607

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           E+N  VHEF +GD+SHPE   I++ ++ ++ +++DAGYVPD+  VL +V E+EK+ +L +
Sbjct: 608 EINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCY 667

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+A+GLIST    P+ +VKNLR C DCH+ AK +S++  R+I+VRD+ RFH F  
Sbjct: 668 HSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFEN 727

Query: 836 GSCSCSDFW 844
           GSCSC D+W
Sbjct: 728 GSCSCKDYW 736



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 235/478 (49%), Gaps = 38/478 (7%)

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            YG+CG + D   VF  +   N VSWT ++ A AR    +EA+  +  MV EG++P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
            V  I  C+  ++L+ G  + A I E   ++ + ++  AL+ MY +C  ++ A++ F E 
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP---RPDRVTMLSAVSASAQLGDLL 357
             + LV  N +++ Y R G  R AL I  +M+   P   +PD +T  SA+ A + +GD+ 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            GR      + +G      + N +I+MY KCG  E A ++FD + N+ V++WN++I+G  
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
           K G                                  +A+ELF+ M     K + VT +G
Sbjct: 241 KQGAA-------------------------------TQALELFQRMGPNDPKPNVVTFIG 269

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP-QRAMQVFRRMEKR 536
           + +AC  L  L+  + I+  ++++G   D+ +   L++M+ +C    + A QVF R+  R
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTR 329

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           DV  W   I A    G  + A+++F +M  + + P+ I    VL+AC+  G   QG    
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG-KAV 388

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            ++         +V    ++++  R G L + + +  ++  + + V W +L+AA  +H
Sbjct: 389 HALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQH 445



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 257/537 (47%), Gaps = 44/537 (8%)

Query: 35  SIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           +IG   + K L + +  H  IL+  L      +   + T         L  A+K FD   
Sbjct: 64  AIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALIT--MYARCRDLELARKTFDEMG 121

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF---GILPDKFTFPFVLNACTKS 151
           K      TL  +N+LI GYS  G    A+ +Y ++      G+ PD  TF   L AC+  
Sbjct: 122 KK-----TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVV 176

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
               +G ++    V  G+  D  V+N LIN Y +CG +   R+VFD +  R+V++W ++I
Sbjct: 177 GDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
              A++    +A+ LF  M     KPN VT + +++AC  L++LE G  +   + E G +
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYE 296

Query: 272 ANALMVNALVDMYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           ++ ++ N L++MY KC  +++ A+Q+F   + R+++  N ++  YV+ G A++AL I  +
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M L    P+ +T+ + +SA A LG    G+  H  +     +    + N++++MY +CG 
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            +    +F  + +K++VSW++LIA   ++G   +  E F E                   
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWE------------------- 457

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQL 509
                       +L E +  D VTMV   SAC + G L +  +   + +  +G+  D + 
Sbjct: 458 ------------LLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRH 505

Query: 510 ATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
              +VD+ +R G  + A  +   M    D  AWT+ +    +  + ++A  + +++ 
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLF 562



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 6/154 (3%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           +L  +++LI  Y+  G     +  + EL   G+  D  T    L+AC+      EGVQ  
Sbjct: 431 SLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSF 490

Query: 162 GAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARRDL 219
            ++V   G   D     C+++     G +     +  +M    + V+WTSL+  C   + 
Sbjct: 491 LSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHND 550

Query: 220 PKEAVYL---FFEMVEEGIKPNSVTMVCVISACA 250
            K A  +    FE+  E  + ++VT++  + A A
Sbjct: 551 TKRAARVADKLFELESED-EHSTVTLLSNVYAEA 583


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 284/891 (31%), Positives = 461/891 (51%), Gaps = 84/891 (9%)

Query: 29   TPKDSPSIGSLKNCK----TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
            TP +    G L+ C+      + ++Q H  I+ QGLG      + ++   ++ G  +   
Sbjct: 166  TPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDR-- 223

Query: 85   YAQKAFD-YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
             A++ FD  Y+KD+ +      + ++I G S     VEAI L+ ++   GI+P  + F  
Sbjct: 224  -ARRVFDGLYLKDHSS------WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSS 276

Query: 144  VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
            VL+AC K  +   G Q+HG ++K+GF  D +V N L++ Y   G ++    +F  MS+R+
Sbjct: 277  VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336

Query: 204  VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
             V++ +LI   ++    ++A+ LF  M  +G++P+S T+  ++ AC+    L  G ++ A
Sbjct: 337  AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396

Query: 264  YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            Y  +LG  +N  +  AL+++Y KC  ++TA   F E +  N+VL N ++  Y  L   R 
Sbjct: 397  YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456

Query: 324  ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE----------- 372
            +  I  +M +    P++ T  S +    +LGDL  G   H  +++   +           
Sbjct: 457  SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLID 516

Query: 373  ----------GWDSIC----------NTMIDMYMKCGKQEMACRIFDHMSNKTVVS---- 408
                       WD +            TMI  Y +    + A   F  M ++ + S    
Sbjct: 517  MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 576

Query: 409  -----------------------------------WNSLIAGLIKNGDVESAREVFSEMP 433
                                                N+L+    K G++E A   F +  
Sbjct: 577  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE 636

Query: 434  GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
              D+I+WN ++ G  Q    EEA+ +F  M  E I  +  T      A      +   K 
Sbjct: 637  AGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQ 696

Query: 494  IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
            ++A I K G   + ++  A++ M+A+CG    A + F  +  ++  +W A I A +  G 
Sbjct: 697  VHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGF 756

Query: 554  GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
            G +A++ F++M+   ++P+ +  VGVL+ACSH GLV++G   F SM   +G++P+  HY 
Sbjct: 757  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYV 816

Query: 614  CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
            C+VD+L RAGLL  A D I  MP+EP+ ++W +LL+AC  H+N++I  +AA  + EL+PE
Sbjct: 817  CVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 876

Query: 674  KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             S  +VLLSN+YA   KW      R +MKE+G++K PG S IEV   +H F  GD++HP 
Sbjct: 877  DSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 936

Query: 734  MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
             + I    +++  R  + GYV D  ++L ++ +++K   +  HSEKLA++FGL+S   TM
Sbjct: 937  ADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATM 996

Query: 794  PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PI V+KNLR+C DCH + K VSKV +REIIVRD  RFH F  G+CSC D+W
Sbjct: 997  PINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 247/533 (46%), Gaps = 41/533 (7%)

Query: 133 GILPDKFTFPFVLNACTKSS-AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
           GI P+  T  ++L  C K++ +  EG ++H  I+K+GFD +  +   L++FY   GD+  
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-A 250
             +VFDEM ER + +W  +I   A R L  +   LF  MV E + PN  T   V+ AC  
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
                ++ +++ A I   G+  + ++ N L+D+Y + G VD A+++F     ++      
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++S   +     EA+ +  +M + G  P      S +SA  ++  L  G   HG VL+ G
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
                 +CN ++ +Y   G    A  IF +MS +  V++N+LI GL              
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGL-------------- 347

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                            +Q    E+AMELF+ M  + ++ D  T+  +  AC   G L  
Sbjct: 348 -----------------SQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            + ++AY  K G   + ++  AL++++A+C D + A+  F   E  +V  W   + A  +
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGL 450

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
             +   +  +F +M  + I P+   +  +L  C   G +  G  +    + I   S Q+ 
Sbjct: 451 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTSFQLN 507

Query: 611 HYGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
            Y C  ++D+  + G L  A D++  +     DV+ W +++A   ++   D A
Sbjct: 508 AYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKA 558


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 289/822 (35%), Positives = 437/822 (53%), Gaps = 49/822 (5%)

Query: 29  TPKDSPSIG-SLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
           +P D  S+   LK C  L +    KQ HC  +K G     S  + +V    +    ES+ 
Sbjct: 88  SPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKT---ESVE 144

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
             ++ FD     N  S     + SL+ GY   GL  +A+ L+ ++   GI P+ FTF  V
Sbjct: 145 DGERVFDEMRVKNVVS-----WTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAV 199

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L       A  +GVQVH  ++K G D  +FV N ++N Y +   + D + VFD M  RN 
Sbjct: 200 LGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNA 259

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           VSW S+I       L  EA  LF+ M  EG+K        VI  CA ++ +    ++   
Sbjct: 260 VSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQ 319

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD-RNLVLCNTIMSNYVRLGLARE 323
           + + G   +  +  AL+  Y KC  +D A +LF      +N+V    I+S YV+ G    
Sbjct: 320 VIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDR 379

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           A+ +  +M   G RP+  T  + ++A+A +         H  V++   E   S+   + D
Sbjct: 380 AMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSD 435

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
            Y K G    A +IF+ +  K                               D ++W+ M
Sbjct: 436 SYSKIGDANEAAKIFELIDEK-------------------------------DIVAWSAM 464

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY-LGALDLAKWIYAYIEKNG 502
           L G  Q    E A+++F  +  E ++ +  T   V +AC     +++  K  ++   K+G
Sbjct: 465 LSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG 524

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
               + +++ALV M+A+ G+ + A +VF+R   RD+ +W + I   A  G G++++++F 
Sbjct: 525 FSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFE 584

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           EM  + ++ D I F+GV++AC+H GLVN+G   F  M   + + P + HY CMVDL  RA
Sbjct: 585 EMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRA 644

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G+L +A+DLI  MP      IW +LLAAC+ H NV +   AAE++  L P+ S  +VLLS
Sbjct: 645 GMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLS 704

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           NIYA+AG W   A+VR  M  + ++K  G S IEV  K   F +GD SHP+ + I   L 
Sbjct: 705 NIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLE 764

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           E++ RL+DAGY PD   VL DV+E+ K+ +LS HSE+LA+AFGLI+T    PI++VKNLR
Sbjct: 765 ELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLR 824

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH+  KL+SK+  R+I+VRD+NRFH F+ GSCSC D+W
Sbjct: 825 VCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/773 (35%), Positives = 430/773 (55%), Gaps = 39/773 (5%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF-- 132
           A  G F  +  A K F Y    N     L  +NS+I G+S  G   +   + VE+     
Sbjct: 74  AMYGKFGFVDAAVKVFHYMPVRN-----LVSWNSIISGFSENGFSKDCFDMLVEMMAGEE 128

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+LPD  T   VL  C +      G+++HG  VK+G   DV V N L++ Y +CG + + 
Sbjct: 129 GLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEA 188

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAK 251
           + +FD+ + +N VSW ++I     +    EA  LF EM ++E I+ N VT++ ++ AC +
Sbjct: 189 QMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLE 248

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +  L     +  Y    G + + L+ N  V  Y KCG +  A+++F   + + +   N +
Sbjct: 249 ISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNAL 308

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +    + G  R+AL +  +M   G  PD  T+ S + ASA L  L  G+  HG+VLR+GL
Sbjct: 309 IGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGL 368

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           E    I  +++ +Y+ CG+                                 SAR +F  
Sbjct: 369 EIDSFIGISLLSLYIHCGESS-------------------------------SARLLFDG 397

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           M  +  +SWN M+ G +Q  + E+A+ LFR ++S+  +   + +V V  AC    AL L 
Sbjct: 398 MEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLG 457

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K  + Y  K  +  D+ +A + +DM+A+ G  + +  VF  ++ +D+++W A I A  + 
Sbjct: 458 KETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVH 517

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G+GE+++ELF  M + G  PD   F+G+LT CSH GLV +G   F  M + HG+ P++ H
Sbjct: 518 GDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEH 577

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y C++D+LGRAG L +AL L+  MP +P+  +W SLL+ C+    ++I    AE++ EL+
Sbjct: 578 YACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELE 637

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           P+    +V LSN+YA +G+W +V RVR  +K+ G++K  G S IE+ GKVH F +GD   
Sbjct: 638 PKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLL 697

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
           P+   +S   R++  ++   GY P+ + VL DVDE++K   L  HSEKLA+ FGL++T+K
Sbjct: 698 PQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTK 757

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              +R+ KNLR+C DCH+ +K +S+V  REII+RDN RFH F+ G CSC D+W
Sbjct: 758 GTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 268/563 (47%), Gaps = 43/563 (7%)

Query: 121 EAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
           +AI ++V+L        D FTFP V+ ACT S   G G  +HG ++KMG   DVFV N L
Sbjct: 13  DAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL 72

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV--EEGIKP 237
           I  YG+ G +    +VF  M  RN+VSW S+I   +     K+   +  EM+  EEG+ P
Sbjct: 73  IAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLP 132

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +  T+V V+  CA+  ++++G R+     +LG+  +  + N+LVDMY KCG +  A+ LF
Sbjct: 133 DIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLF 192

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDL 356
            +   +N V  NT++      G   EA  +  EM +      + VT+L+ + A  ++  L
Sbjct: 193 DKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQL 252

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
              +  HGY +R+G +  + + N  +  Y KCG    A R+F  M  KTV SWN+LI G 
Sbjct: 253 RSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGC 312

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            +NGD   A  ++ +M             GL                       D  T+ 
Sbjct: 313 AQNGDPRKALNLYIQMT----------YSGLVP---------------------DWFTIG 341

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            +  A  +L +L   K ++ ++ ++G+  D  +  +L+ ++  CG+   A  +F  ME++
Sbjct: 342 SLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEK 401

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG--WH 594
              +W A I   +  G  E A+ LF +++  G +P  I  V VL ACS    +  G   H
Sbjct: 402 SSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETH 461

Query: 595 LFRSMTDIHGVSPQIVHYGC-MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
            +     +  +  + V   C  +D+  ++G + E+  +   +    +   W +++AA   
Sbjct: 462 CYA----LKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGV 516

Query: 654 HQNVDIAAYAAERITELDPEKSG 676
           H + + +    ER+ ++     G
Sbjct: 517 HGDGEESIELFERMRKVGQMPDG 539


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/664 (39%), Positives = 394/664 (59%), Gaps = 42/664 (6%)

Query: 193 RRVFDEMSER-NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
           R +F +  ++ +V SW S+I   AR     +A+Y F  M +  + PN  T  C I +C+ 
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L +L  G ++       G  ++  + +AL+DMY KCG ++ A++LF E  +RN+V   ++
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLL--CGRMC------ 362
           +S YV+   AREA+ +  E LL      D +  +     S  LG ++  C R+C      
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218

Query: 363 --HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             HG  ++ G EG  ++ NT++D Y KCG+  ++ ++FD M    V SWNSLIA   +NG
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
               A  +FS+M  R  + +N                               VT+  V  
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNA------------------------------VTLSAVLL 308

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC + GAL + K I+  + K  +  ++ + T++VDM+ +CG  + A + F R+++++V +
Sbjct: 309 ACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS 368

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           WT  +    M G+G++A+++F EM+R GIKP+ I FV VL ACSH GL+ +GWH F  M 
Sbjct: 369 WTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
               V P I HY CMVDLLGRAG L EA  LI+ M V+P+ ++WGSLL AC+ H+NV++ 
Sbjct: 429 CEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELG 488

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
             +A ++ +LDP   G +VLLSNIYA AG+W +V R+R+ MK  G+ K PG S +E  G+
Sbjct: 489 EISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGR 548

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           VH F  GD+ HP+   I   L E+N +L++ GY+P++T+VL DVD +EK  +L  HSEKL
Sbjct: 549 VHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKL 608

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+AFG++++     I+++KNLR+C DCH   KL+SK+ +REI++RD+ RFH F+ G CSC
Sbjct: 609 AVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSC 668

Query: 841 SDFW 844
            D+W
Sbjct: 669 GDYW 672



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 235/469 (50%), Gaps = 45/469 (9%)

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
            +++ +NS+I  ++  G  ++A+  +  +    + P++ TFP  + +C+       G Q+
Sbjct: 49  TSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQI 108

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           H      G+  D+FV + LI+ Y +CG + D R++FDE+ ERNVVSWTS+I    + +  
Sbjct: 109 HQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERA 168

Query: 221 KEAVYLF--FEMVEE---------GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +EAV+LF  F +V+E         G+  +SV + CVISACA++    + + V     + G
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG 228

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
            +    + N L+D Y KCG +  ++++F   ++ ++   N++++ Y + GL+ EA ++  
Sbjct: 229 FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288

Query: 330 EMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
           +M+  G  R + VT+ + + A A  G L  G+  H  V++  LE    +  +++DMY KC
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC 348

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G+ EMA + FD +  K V SW  ++AG   +G  +                         
Sbjct: 349 GRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGK------------------------- 383

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDM 507
                 EAM++F  M+   IK + +T V V +AC + G L     W      +  +   +
Sbjct: 384 ------EAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGI 437

Query: 508 QLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +  + +VD+  R G  + A  + + M+ K D   W + +GA  +  N E
Sbjct: 438 EHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVE 486


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 274/739 (37%), Positives = 412/739 (55%), Gaps = 41/739 (5%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           LN+ T S    +  Q H  I+K G   D  +   L++ Y       D   V D + E NV
Sbjct: 22  LNSTTAS--LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNV 79

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
            S+++LI A ++      A+  F +M+  G+ P++  +   + ACA L  L+   +V   
Sbjct: 80  FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139

Query: 265 IDELGMKANALMVNALVDMYMKC-------------------------------GAVDTA 293
               G  +++ + ++LV MY+KC                               G VD A
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 294 KQLFGECKDR----NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           K+LF E  D     NL+  N +++ +   GL  EA+ +  +M L G  PD  T+ S + A
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPA 259

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
              L DL+ G + HGYV++ GL     + + +IDMY KC       ++FD M +  V S 
Sbjct: 260 VGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSC 319

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           N+ I GL +NG VES+  +F ++  +    + +SW +M+   +Q     EA+ELFR M  
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQI 379

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             +K + VT+  +  ACG + AL   K  + +  + GI  D+ + +AL+DM+A+CG  Q 
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQA 439

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           +   F  +  +++  W A I   AM G  ++A+E+F+ M R G KPD I F  VL+ACS 
Sbjct: 440 SRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQ 499

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GL  +G + F SM+  +G+  ++ HY CMV LL RAG L +A  +I+ MPV P+  +WG
Sbjct: 500 SGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWG 559

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL++C+ H NV +   AAE++ EL+P   G ++LLSNIYAS G W  V RVR  MK +G
Sbjct: 560 ALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           +RK PG S IEV  KVH   +GD+SHP+M  I   L +++  ++  GY P++  VL DV+
Sbjct: 620 LRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVE 679

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           EQ+K+ +L  HSEKLA+ FGL++T    P++V+KNLR+C DCH   K +S    REI VR
Sbjct: 680 EQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVR 739

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH F++G+CSC D+W
Sbjct: 740 DTNRFHHFKEGACSCGDYW 758



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/596 (26%), Positives = 259/596 (43%), Gaps = 114/596 (19%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +L++ +Q H HILK GL +     +K++   A    F   T         + D      +
Sbjct: 28  SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATL--------VLDLVPEPNV 79

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F +++LI  +S       A+S + ++   G++PD    P  + AC   SA     QVHG 
Sbjct: 80  FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
               GFD D FV++ L++ Y +C  I D  RVFD M E +VVSW++L+ A AR+    EA
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 224 VYLFFEMVEEGIKPNSV-----------------------------------TMVCVISA 248
             LF EM + G++PN +                                   T+  V+ A
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPA 259

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC--------------------- 287
              L++L +G  +  Y+ + G+ ++  + +AL+DMY KC                     
Sbjct: 260 VGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSC 319

Query: 288 ----------GAVDTAKQLFGECKDR----NLVLCNTIMSNYVRLGLAREALAILDEMLL 333
                     G V+++ +LF + KD+    N+V   ++++   + G   EAL +  EM +
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQI 379

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G +P+ VT+   + A   +  L+ G+  H + LR G+     + + +IDMY KCG+ + 
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQA 439

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           +   FD +  K +V WN++IAG   +G  +                              
Sbjct: 440 SRICFDGIPTKNLVCWNAVIAGYAMHGKAK------------------------------ 469

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATA 512
            EAME+F +M     K D ++   V SAC   G  +   + +  +  K GI   ++    
Sbjct: 470 -EAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYAC 528

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           +V + +R G  ++A  + RRM    D   W A + +  +  N   GE A E   E+
Sbjct: 529 MVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFEL 584



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 132/290 (45%), Gaps = 42/290 (14%)

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           + L+ +ALA+LD +        + T+ + ++++     L   R  H ++L+ GL      
Sbjct: 1   MSLSAQALALLDSV--------QHTIFNCLNSTT--ASLSQTRQAHAHILKTGL------ 44

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
                          +A ++  H +N    +  +L+  L+   +V               
Sbjct: 45  ----------FNDTHLATKLLSHYANNMCFADATLVLDLVPEPNV--------------- 79

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
            S++T++   ++ + F  A+  F  ML+  +  D   +     AC  L AL  A+ ++  
Sbjct: 80  FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
              +G   D  + ++LV M+ +C   + A +VF RM + DV +W+A + A A +G  ++A
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
             LF+EM   G++P+ I + G++   +H GL ++   +F  M  + G  P
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEP 248


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 275/796 (34%), Positives = 440/796 (55%), Gaps = 39/796 (4%)

Query: 49   KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
            +Q H  +LKQG   +    + +V   +++G F     A++ F+  ++ +E S     YNS
Sbjct: 291  EQLHGLVLKQGFSLETYVCNALVTLYSRLGNF---IPAEQVFNAMLQRDEVS-----YNS 342

Query: 109  LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
            LI G S  G   +A+ L+ ++    + PD  T   +L+AC+   A   G Q H   +K G
Sbjct: 343  LISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAG 402

Query: 169  FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
               D+ +E  L++ Y +C DI      F      NVV W  ++ A    D   E+  +F 
Sbjct: 403  MSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFT 462

Query: 229  EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            +M  EGI+PN  T   ++  C+ L+ ++LG+++   + + G + N  + + L+DMY K G
Sbjct: 463  QMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLG 522

Query: 289  AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
             +D A ++F   K++++V    +++ Y +     EAL +  EM   G   D +   SA+S
Sbjct: 523  KLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAIS 582

Query: 349  ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
            A A +  L  G+  H     +G     S+ N ++ +Y +CGK   A   FD         
Sbjct: 583  ACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFD--------- 633

Query: 409  WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
                              ++FS    +D+ISWN+++ G  Q    EEA+ LF  M     
Sbjct: 634  ------------------KIFS----KDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQ 671

Query: 469  KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
            +++  T     SA   +  + L K I+A I K G   + +++  L+ ++A+CG+   A +
Sbjct: 672  EINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAER 731

Query: 529  VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
             F  M +++  +W A +   +  G+G +A+ LF +M + G+ P+ + FVGVL+ACSH GL
Sbjct: 732  QFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGL 791

Query: 589  VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
            V++G   F+SM ++HG+ P+  HY C+VDLLGR+GLL  A   ++ MP++P+ ++  +LL
Sbjct: 792  VDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLL 851

Query: 649  AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
            +AC  H+N+DI  +AA  + EL+P+ S  +VLLSN+YA  GKW    R R  MK++G++K
Sbjct: 852  SACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKK 911

Query: 709  LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
             PG S IEVN  VH F +GD+ HP ++ I   LR++N    + GY+P   ++L D + ++
Sbjct: 912  EPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQ 971

Query: 769  KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
            K      HSEKLA+AFGL+S S + PI V KNLR+C DCH++ K VSK+ DR I+VRD+ 
Sbjct: 972  KGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSY 1031

Query: 829  RFHFFRQGSCSCSDFW 844
            RFH F+ G CSC D+W
Sbjct: 1032 RFHHFKGGICSCKDYW 1047



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 160/572 (27%), Positives = 280/572 (48%), Gaps = 38/572 (6%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+K FD   K +  S     + +++ G S  G   EA+ L+ ++   G+ P  + F 
Sbjct: 221 LNSAKKVFDGLQKRDSVS-----WVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFS 275

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL+ACTK   +  G Q+HG ++K GF  + +V N L+  Y   G+ +   +VF+ M +R
Sbjct: 276 SVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQR 335

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + VS+ SLI   +++    +A+ LF +M  + +KP+ VT+  ++SAC+ +  L +G +  
Sbjct: 336 DEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFH 395

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           +Y  + GM ++ ++  AL+D+Y+KC  + TA + F   +  N+VL N ++  Y  L    
Sbjct: 396 SYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLN 455

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           E+  I  +M + G  P++ T  S +   + L  +  G   H  VL+ G +    + + +I
Sbjct: 456 ESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLI 515

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY K GK + A +IF  +  K VVSW ++IA                            
Sbjct: 516 DMYAKLGKLDHALKIFRRLKEKDVVSWTAMIA---------------------------- 547

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
              G  Q   F EA+ LF+ M  + I  D +      SAC  + AL+  + I+A    +G
Sbjct: 548 ---GYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG 604

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
              D+ +  ALV ++ARCG  + A   F ++  +D  +W + I   A  G+ E+A+ LF+
Sbjct: 605 YSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFS 664

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           +M + G + +S  F   ++A ++   V  G  +  +M    G   +      ++ L  + 
Sbjct: 665 QMSKAGQEINSFTFGPAVSAAANVANVKLGKQI-HAMIIKTGHDSETEVSNVLITLYAKC 723

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           G + +A      MP E N++ W ++L    +H
Sbjct: 724 GNIDDAERQFFEMP-EKNEISWNAMLTGYSQH 754



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 149/589 (25%), Positives = 279/589 (47%), Gaps = 49/589 (8%)

Query: 76  QMGTFESLTYAQKAFDYYIK--DNETSATLF---------MYNSLIRGYSCIGLGVEAIS 124
           +MG    +   ++  D YI   D + + T+F          +N ++  +    +    + 
Sbjct: 96  KMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLG 155

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ-VHGAIVKMGFDRDVFVENCLINFY 183
           L+  +    + PD+ T+  VL  C         V+ +H   +  G++  +FV N LI+ Y
Sbjct: 156 LFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLY 215

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            + G +   ++VFD + +R+ VSW +++   ++    +EAV LF +M   G+ P      
Sbjct: 216 FKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFS 275

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
            V+SAC K++  ++G+++   + + G      + NALV +Y + G    A+Q+F     R
Sbjct: 276 SVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQR 335

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           + V  N+++S   + G + +AL +  +M L   +PD VT+ S +SA + +G LL G+  H
Sbjct: 336 DEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFH 395

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA--GLIKNGD 421
            Y ++ G+     +   ++D+Y+KC   + A   F     + VV WN ++   GL+ N  
Sbjct: 396 SYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN-- 453

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
                                            E+ ++F  M  E I+ ++ T   +   
Sbjct: 454 -------------------------------LNESFKIFTQMQMEGIEPNQFTYPSILRT 482

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  L A+DL + I+  + K G   ++ +++ L+DM+A+ G    A+++FRR++++DV +W
Sbjct: 483 CSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSW 542

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           TA I   A      +A+ LF EM  QGI  D+I F   ++AC+    +NQG  +  +   
Sbjct: 543 TAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQI-HAQAC 601

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           + G S  +     +V L  R G + +A      +    +++ W SL++ 
Sbjct: 602 VSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISG 649



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 247/524 (47%), Gaps = 34/524 (6%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+  +  T+ ++L+ C  S  F +G ++HG I+KMGF  +V +   L++ Y   GD+   
Sbjct: 63  GVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGA 122

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             VFDEM  R +  W  ++       +    + LF  M++E +KP+  T   V+  C   
Sbjct: 123 VTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGG 182

Query: 253 Q-NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
                  +++ A     G + +  + N L+D+Y K G +++AK++F   + R+ V    +
Sbjct: 183 DVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAM 242

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +S   + G   EA+ +  +M   G  P      S +SA  ++     G   HG VL+ G 
Sbjct: 243 LSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGF 302

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
                +CN ++ +Y + G    A ++F+ M  +  VS+NSLI+GL               
Sbjct: 303 SLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGL--------------- 347

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                           +Q+   ++A+ELF+ M  + +K D VT+  + SAC  +GAL + 
Sbjct: 348 ----------------SQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVG 391

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K  ++Y  K G+  D+ L  AL+D++ +C D + A + F   E  +V  W   + A  + 
Sbjct: 392 KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLL 451

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
            N  ++ ++F +M  +GI+P+   +  +L  CS    V+ G  +   +    G    +  
Sbjct: 452 DNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYV 510

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
              ++D+  + G L  AL + + +  E + V W +++A   +H+
Sbjct: 511 SSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQHE 553



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 12/284 (4%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD- 91
           + +I +    + LN+ +Q H      G     S  + +V   A+ G      +A   FD 
Sbjct: 578 ASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFA---FDK 634

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
            + KDN +      +NSLI G++  G   EA+SL+ +++  G   + FTF   ++A    
Sbjct: 635 IFSKDNIS------WNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANV 688

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
           +    G Q+H  I+K G D +  V N LI  Y +CG+I D  R F EM E+N +SW +++
Sbjct: 689 ANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAML 748

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GM 270
              ++     +A+ LF +M + G+ PN VT V V+SAC+ +  ++ G +    + E+ G+
Sbjct: 749 TGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGL 808

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDR-NLVLCNTIMS 313
                    +VD+  + G +  A++   E   + + ++C T++S
Sbjct: 809 VPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLS 852



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 2/192 (1%)

Query: 460 FRVMLSER-IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           F  ++ ER ++ +  T + +   C   G       ++  I K G   ++ L   L+D++ 
Sbjct: 55  FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYI 114

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
             GD   A+ VF  M  R +S W   +          + + LF  ML++ +KPD   + G
Sbjct: 115 AFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAG 174

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL  C  G +         + T  HG    +     ++DL  + G L  A  +   +  +
Sbjct: 175 VLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ-K 233

Query: 639 PNDVIWGSLLAA 650
            + V W ++L+ 
Sbjct: 234 RDSVSWVAMLSG 245


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 250/557 (44%), Positives = 357/557 (64%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G++  A+ +F      N  + NT++  Y       EAL +   ML H    +  T    +
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A + +  L   +  H ++++ G        N+++++Y K G  + A  +FD +  +  V
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SWNS+I G  K G++E A E+F+ MP R+ ISW +M+ G       +EA+ LF  M +  
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           IK+D V +V    AC  LG LD  KWI+AYI+K+ I  D  L   L+DM+A+CGD + A+
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           +VFR+ME++ VS WTA I   A+ G G +A+E F +M   G++P+ + F G+LTACSH G
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV++   LF SM  IHG  P I HYGCMVDLLGRAGLL EA +LI++MPV+PN  IWG+L
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC  H N+++     + + ++DP   G ++ L++I+A+AG+W   ARVR QMKEQG+ 
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           KLPG S I VNG  HEF +GDESHP++  I  ML ++  RLR+ GY P L ++LLD++++
Sbjct: 486 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDK 545

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+  + HHSEKLA+ FGLIST   M IR+VKNLR+C DCH+  KL+SKVY REI++RD 
Sbjct: 546 EKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDR 605

Query: 828 NRFHFFRQGSCSCSDFW 844
            RFH F+ G+C+C D+W
Sbjct: 606 TRFHLFKDGNCTCGDYW 622



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 222/455 (48%), Gaps = 54/455 (11%)

Query: 11  VLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV 70
           +L TPT    +  + A+T       +  L+ C  + EL+Q H  +LK GL       SK+
Sbjct: 4   ILCTPTSQLSSESNAAQT-------LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKL 56

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           +  CA   +  SL YA+  FD   + N      FM+N++IRGYS      EA+ LY  + 
Sbjct: 57  LAFCASPNS-GSLAYARTVFDRIFRPNT-----FMWNTMIRGYSNSKEPEEALLLYHHML 110

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
              +  + +TFPF+L AC+  SA  E  Q+H  I+KMGF  +++  N L+N Y + GDI 
Sbjct: 111 YHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIK 170

Query: 191 DGRRVFDE-------------------------------MSERNVVSWTSLICACARRDL 219
             R +FD+                               M ERN++SWTS+I  C     
Sbjct: 171 SARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGK 230

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
           PKEA+ LF  M   GIK ++V +V  + ACA L  L+ G  + AYI +  ++ + ++   
Sbjct: 231 PKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCV 290

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+DMY KCG ++ A ++F + +++ + +   ++S Y   G  REAL    +M   G  P+
Sbjct: 291 LIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPN 350

Query: 340 RVTMLSAVSASAQLG-----DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           ++T    ++A +  G      LL   M   +  +  +E +      M+D+  + G  + A
Sbjct: 351 QMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY----GCMVDLLGRAGLLKEA 406

Query: 395 CRIFDHMSNKTVVS-WNSLIAGLIKNGDVESAREV 428
             + ++M  K   + W +L+     +G++E  +++
Sbjct: 407 EELIENMPVKPNAAIWGALLNACHIHGNLELGKQI 441



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 199/447 (44%), Gaps = 66/447 (14%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE--CGDIVDGRRVFDEMSE 201
            L+   + S   E  Q+HG ++K G   D    + L+ F      G +   R VFD +  
Sbjct: 21  TLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            N   W ++I   +    P+EA+ L+  M+   +  N+ T   ++ AC+ +  LE   ++
Sbjct: 81  PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140

Query: 262 CAYIDELGMKA-----NALM--------------------------VNALVDMYMKCGAV 290
            A+I ++G  +     N+L+                           N+++D Y KCG +
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           + A ++F    +RN++   +++S  V  G  +EAL +   M   G + D V ++S + A 
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           A LG L  G+  H Y+ ++ +E    +   +IDMY KCG  E A  +F  M  K V  W 
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++I+G   +G             GR                   EA+E F  M +  ++ 
Sbjct: 321 AMISGYAIHGR------------GR-------------------EALEWFMKMQTAGVEP 349

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQV 529
           +++T  G+ +AC + G +  AK ++  +E+ +G    ++    +VD+  R G  + A ++
Sbjct: 350 NQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEEL 409

Query: 530 FRRME-KRDVSAWTAAIGAMAMEGNGE 555
              M  K + + W A + A  + GN E
Sbjct: 410 IENMPVKPNAAIWGALLNACHIHGNLE 436



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 39/270 (14%)

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           +G +  AR VF  +   +   WNTM+ G +     EEA+ L+  ML   +  +  T   +
Sbjct: 65  SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL------------------------- 513
             AC  + AL+  + I+A+I K G   ++    +L                         
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184

Query: 514 ------VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
                 +D + +CG+ + A ++F  M +R++ +WT+ I      G  ++A+ LF+ M   
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQG-W-HLFRSMTDIHGVSPQIVHYGC-MVDLLGRAGL 624
           GIK D++  V  L AC+  G+++QG W H +    +I  + P +   GC ++D+  + G 
Sbjct: 245 GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIE-IDPIL---GCVLIDMYAKCGD 300

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           L EA+++ + M  E    +W ++++    H
Sbjct: 301 LEEAIEVFRKME-EKGVSVWTAMISGYAIH 329


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/809 (34%), Positives = 436/809 (53%), Gaps = 69/809 (8%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  + +L   KQ H  ++  G        + +V   A+   F     +++ FD   +
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLD---SKRLFDEIPE 220

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            N  S     +N+L   Y       EA+ L+ E+   GI P++F+   ++NACT      
Sbjct: 221 RNVVS-----WNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSS 275

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G  +HG ++K+G+D D F  N L++ Y + GD+ D   VF+++ + ++VSW ++I  C 
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCV 335

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
             +  ++A+ L  +M  +                           + + + ++ M+++  
Sbjct: 336 LHEHHEQALELLGQMKRQ---------------------------LHSSLMKMDMESDLF 368

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +   LVDMY KC  ++ A+  F    +++L+  N I+S Y +     EAL++  EM   G
Sbjct: 369 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 428

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
              ++ T+ + + ++A L  +   R  HG  +++G      + N++ID Y KC       
Sbjct: 429 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH----- 483

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                     VE A  +F E    D +S+ +M+    Q    EE
Sbjct: 484 --------------------------VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEE 517

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A++LF  M    +K DR     + +AC  L A +  K ++ +I K G   D+    +LV+
Sbjct: 518 ALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVN 577

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+A+CG    A + F  + +R + +W+A IG +A  G+G QA++LFN+ML++G+ P+ I 
Sbjct: 578 MYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHIT 637

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
            V VL AC+H GLV +    F SM ++ G  P   HY CM+DLLGRAG + EA++L+  M
Sbjct: 638 LVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKM 697

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P E N  +WG+LL A + H++V++   AAE +  L+PEKSG HVLL+NIYASAGKW NVA
Sbjct: 698 PFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVA 757

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
            VR  M++  ++K PG S IEV  KV+ F  GD SH     I + L E++  +  AGYVP
Sbjct: 758 EVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVP 817

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
            +   L DV++ EK+ LL HHSEKLA+AFGLI+T +  PIRV KNLR+C DCH+  K + 
Sbjct: 818 MVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYIC 877

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+  REIIVRD NRFH F+ GSCSC D+W
Sbjct: 878 KIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 197/714 (27%), Positives = 316/714 (44%), Gaps = 110/714 (15%)

Query: 1   MALTLNPSPLVLAT-------PTVTTLTNQ-HKAKTTPKDSPSIGSLKNCKTLNELK--- 49
           + L   P+P ++ T       P  T + N   K   TP        L  C T   L+   
Sbjct: 17  LHLPFKPAPKLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGL 76

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H HI K GL   PS  + ++   ++   F    YA+K     + D  +   L  +++L
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRXF---GYARK-----LVDESSEPDLVSWSAL 128

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           I GY+  GLG  A+  + E+   G+  ++FTF  VL AC+       G QVHG +V  GF
Sbjct: 129 ISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGF 188

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           + DVFV N L+  Y +C + +D +R+FDE+ ERNVVSW +L     + D   EAV LF+E
Sbjct: 189 EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYE 248

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           MV  GIKPN  ++  +++AC  L++   G  +  Y+ +LG   +    NALVDMY K G 
Sbjct: 249 MVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +  A  +F + K  ++V  N +++  V      +AL +L +M                  
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM------------------ 350

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                     R  H  +++  +E    +   ++DMY KC   E A   F+ +  K +++W
Sbjct: 351 ---------KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAW 401

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N++I+G             +S+        W  M           EA+ LF  M  E I 
Sbjct: 402 NAIISG-------------YSQY-------WEDM-----------EALSLFVEMHKEGIG 430

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            ++ T+  +  +   L  + + + ++    K+G H D+ +  +L+D + +C   + A ++
Sbjct: 431 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 490

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F      D+ ++T+ I A A  G GE+A++LF EM    +KPD  V   +L AC++    
Sbjct: 491 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 550

Query: 590 NQGWHLF---------------RSMTDIHG---------------VSPQIVHYGCMVDLL 619
            QG  L                 S+ +++                    IV +  M+  L
Sbjct: 551 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 610

Query: 620 GRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
            + G   +AL L   M    V PN +   S+L AC     V  A    E + EL
Sbjct: 611 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEEL 664


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/721 (36%), Positives = 411/721 (57%), Gaps = 67/721 (9%)

Query: 160 VHGAIVKMGFDRDVFVENCLINF---YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           +H  ++K G     +  + LI F         +     VF+ + E N++ W ++    A 
Sbjct: 21  IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
              P  A+YL+  M+  G+ PN  T   ++ +CAK +    G ++  ++ +LG   +  +
Sbjct: 81  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 140

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVL----------------------------- 307
             +L+ MY++ G ++ A+++F +   R++V                              
Sbjct: 141 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 200

Query: 308 --CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
              N ++S Y   G  +EAL +  EM+    RPD  TM+S VSA AQ   +  GR  H +
Sbjct: 201 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 260

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +  +G      I N +ID+Y+KCG                               +VE+A
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCG-------------------------------EVETA 289

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
             +F  +  +D ISWNT++GG T  N+++EA+ LF+ ML      + VTM+ +  AC +L
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 349

Query: 486 GALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           GA+++ +WI+ YI K   G+       T+L+DM+A+CGD + A QVF  +  R +S+W A
Sbjct: 350 GAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA 409

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I   AM G    A ++F+ M +  I+PD I FVG+L+ACSH G+++ G H+FRSM + +
Sbjct: 410 MIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDY 469

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
            ++P++ HYGCM+DLLG +GL  EA ++I +M +EP+ VIW SLL AC+ + NV++    
Sbjct: 470 KITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESY 529

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
           A+ + +++P+  G +VLLSNIYA+AG+W  VA++R  + ++G++K+PG SSIE++  VHE
Sbjct: 530 AQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHE 589

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F  GD+ HP    I  ML EM   L +AG+VPD + VL +++E+ K+  L HHSEKLA+A
Sbjct: 590 FIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 649

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           FGLIST     + +VKNLR+C +CH   KL+SK+Y REII RD  RFH FR G CSC+D+
Sbjct: 650 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 709

Query: 844 W 844
           W
Sbjct: 710 W 710



 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 190/590 (32%), Positives = 311/590 (52%), Gaps = 72/590 (12%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           ++ PS+  L NCKTL  L+  H  ++K GL +    +SK++  C     F+ L YA   F
Sbjct: 1   RNHPSLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVF 60

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           +   + N     L ++N++ RG++     V A+ LYV +   G+LP+ +TFPF+L +C K
Sbjct: 61  ETIQEPN-----LLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           S AF EG Q+HG ++K+G+D D++V   LI+ Y + G + D R+VFD+ S R+VVS+T+L
Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 175

Query: 211 ICACARR-----------DLP--------------------KEAVYLFFEMVEEGIKPNS 239
           I   A +           ++P                    KEA+ LF EM++  ++P+ 
Sbjct: 176 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 235

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            TMV V+SACA+  ++ELG +V ++ID+ G  +N  +VNAL+D+Y+KCG V+TA  LF  
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 295

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              ++++  NT++  Y  + L +EAL +  EML  G  P+ VTMLS + A A LG +  G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 355

Query: 360 RMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
           R  H Y+ +   G+    S   ++IDMY KCG  E A ++FD + N+++ SWN++I G  
Sbjct: 356 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFA 415

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
            +G   +A ++FS M   +                               I+ D +T VG
Sbjct: 416 MHGRANAAFDIFSRMRKNE-------------------------------IEPDDITFVG 444

Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-K 535
           + SAC + G LDL + I+  ++++  I   ++    ++D+    G  + A ++   ME +
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME 504

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK-PDSIVFVGVLTACS 584
            D   W + + A  M  N E        +++   K P S V +  + A +
Sbjct: 505 PDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 554


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/704 (36%), Positives = 413/704 (58%), Gaps = 34/704 (4%)

Query: 144 VLNACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           +L AC +      G ++H  +     F  D  +   +I  Y  CG   D R VFD++  +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRV 261
           N+  W +++ A  R +L ++A+ +F E++     KP++ T+ CVI ACA L +L LG  +
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTA-KQLFGECKDRNLVLCNTIMSNYVRLGL 320
                ++ + ++  + NAL+ MY KCG V+ A K++F     + +   N ++  Y +   
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            R+AL +  +M   G  PD  T+ S + A +++  L  G   HG+ LRNGL     I  +
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++ +Y+ CGK   A  +FD M ++++VS                               W
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVS-------------------------------W 379

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N M+ G +Q  + +EA+ LFR MLS+ I+   + ++ V  AC  L AL L K ++ +  K
Sbjct: 380 NVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALK 439

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
             +  D+ ++++++DM+A+ G    + ++F R+ ++DV++W   I    + G G++A+EL
Sbjct: 440 AHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALEL 499

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F +MLR G+KPD   F G+L ACSH GLV  G   F  M ++H + P++ HY C+VD+LG
Sbjct: 500 FEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLG 559

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAG + +AL LI+ MP +P+  IW SLL++C+ H N+ +    A ++ EL+PEK   +VL
Sbjct: 560 RAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVL 619

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           +SN++A +GKW +V RVR +MK+ G++K  G S IEV GKVH F  GDE  PE+  +   
Sbjct: 620 ISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRET 679

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
            R +  ++   GY PD  +VL D++E++K  +L  HSEKLA++FGL++T+K +P+RV KN
Sbjct: 680 WRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKN 739

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH+ AK +SKV +R+I+VRDN RFH FR G CSC D+W
Sbjct: 740 LRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 243/494 (49%), Gaps = 36/494 (7%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAF 154
           D      LF +N+++  Y+   L  +A+S++ EL       PD FT P V+ AC      
Sbjct: 165 DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDL 224

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG-RRVFDEMSERNVVSWTSLICA 213
           G G  +HG   KM    DVFV N LI  YG+CG + +  +RVFD M  + V SW +L+C 
Sbjct: 225 GLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCG 284

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A+   P++A+ L+ +M + G+ P+  T+  ++ AC+++++L  G+ +  +    G+  +
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 344

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  +L+ +Y+ CG    A+ LF   + R+LV  N +++ Y + GL  EA+ +  +ML 
Sbjct: 345 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 404

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G +P  + ++    A +QL  L  G+  H + L+  L     + +++IDMY K G   +
Sbjct: 405 DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGL 464

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           + RIFD +  K V SWN +IAG                + GR                  
Sbjct: 465 SQRIFDRLREKDVASWNVIIAGY--------------GIHGRG----------------- 493

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATA 512
           +EA+ELF  ML   +K D  T  G+  AC + G + D  ++    +  + I   ++  T 
Sbjct: 494 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 553

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-QGIK 570
           +VDM  R G    A+++   M    D   W++ + +  + GN     ++ N++L  +  K
Sbjct: 554 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK 613

Query: 571 PDSIVFVGVLTACS 584
           P++ V +  L A S
Sbjct: 614 PENYVLISNLFAGS 627



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 195/388 (50%), Gaps = 25/388 (6%)

Query: 58  QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
            G+  K   +S V    A +  +      ++A    + D   + T+  +N+L+ GY+   
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKR-VFDLMDTKTVSSWNALLCGYAQNS 289

Query: 118 LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
              +A+ LY+++   G+ PD FT   +L AC++  +   G ++HG  ++ G   D F+  
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
            L++ Y  CG     + +FD M  R++VSW  +I   ++  LP EA+ LF +M+ +GI+P
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
             + ++CV  AC++L  L LG  +  +  +  +  +  + ++++DMY K G +  ++++F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
              +++++   N I++ Y   G  +EAL + ++ML  G +PD  T    + A +      
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS------ 523

Query: 358 CGRMCHGYVLRNGLEGWDSICNT------------MIDMYMKCGKQEMACRIFDHM-SNK 404
                H  ++ +GLE ++ + N             ++DM  + G+ + A R+ + M  + 
Sbjct: 524 -----HAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDP 578

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEM 432
               W+SL++    +G++    +V +++
Sbjct: 579 DSRIWSSLLSSCRIHGNLGLGEKVANKL 606



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 149/379 (39%), Gaps = 95/379 (25%)

Query: 32  DSPSIGSL----KNCKTLNELKQPHCHILKQGLGHKP----SYISKVVCTCAQMGTFESL 83
           D  +IGSL       K+L+  ++ H   L+ GL   P    S +S  +C           
Sbjct: 309 DWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFA----- 363

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
             AQ  FD          +L  +N +I GYS  GL  EAI+L+ ++   GI P +     
Sbjct: 364 --AQVLFD-----GMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 416

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           V  AC++ SA   G ++H   +K     D+FV + +I+ Y + G I   +R+FD + E++
Sbjct: 417 VCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKD 476

Query: 204 VVSW-----------------------------------TSLICACARRDLPKEAVYLFF 228
           V SW                                   T ++ AC+   L ++ +  F 
Sbjct: 477 VASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFN 536

Query: 229 EMVE-EGIKPNSVTMVCVI--------------------------------SACAKLQNL 255
           +M+    I+P      CV+                                S+C    NL
Sbjct: 537 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNL 596

Query: 256 ELGDRVCAYIDELGMKA--NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            LG++V   + EL  +   N ++++   +++   G  D  +++ G  KD  + L      
Sbjct: 597 GLGEKVANKLLELEPEKPENYVLIS---NLFAGSGKWDDVRRVRGRMKD--IGLQKDAGC 651

Query: 314 NYVRLGLAREALAILDEML 332
           +++ +G       I DEML
Sbjct: 652 SWIEVGGKVHNFLIGDEML 670


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 287/825 (34%), Positives = 432/825 (52%), Gaps = 44/825 (5%)

Query: 24  HKAKTTPKDSPSIGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           H A   P        L  C   K  +  +Q H  + K G   +    + +V   ++M  F
Sbjct: 205 HTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNF 264

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
            S   A+K F      +E S     +NSLI G +  G    A+ L+ ++    + PD  T
Sbjct: 265 VS---AEKVFSKMQSKDEVS-----FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVT 316

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
              +L+AC  + A  +G Q+H  ++K G   D+ VE  L++ Y  C DI     +F    
Sbjct: 317 VASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQ 376

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
             NVV W  ++ A  + D   E+  +F +M  +G+ PN  T   ++  C  +  L+LG++
Sbjct: 377 TENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ 436

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           +   + + G + N  + + L+DMY K G +DTA  +     + ++V    ++S Y +  L
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             EAL    EML  G + D +   SA+SA A +  L  GR  H     +G     SI N 
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA 556

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++ +Y +CG+                          IK   +E     F ++  +D ISW
Sbjct: 557 LVSLYARCGR--------------------------IKEAYLE-----FEKIDAKDSISW 585

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N ++ G  Q    E+A+++F  M   +++    T     SA   +  +   K I+A I K
Sbjct: 586 NGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIK 645

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVE 559
            G   D++++ AL+  +A+CG  + A + F  M EK DVS W A I   +  G G +AV 
Sbjct: 646 RGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVS-WNAMITGYSQHGYGNEAVN 704

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF +M + G  P+ + FVGVL+ACSH GLV +G   F SM+  HG+ P+  HY C+VDL+
Sbjct: 705 LFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLI 764

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            RAG L  A   I+ MP+EP+  IW +LL+AC  H+NV++  +AA+ + EL+PE S  +V
Sbjct: 765 SRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYV 824

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN+YA +GKW    + R  M+ +G++K PG S IEV   VH F  GD  HP  + I  
Sbjct: 825 LLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYE 884

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L E+N +  + GY  D  ++L DV++++K   +  HSEKLA+ FGL+S S T+PI V+K
Sbjct: 885 FLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMK 944

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCHS+ K VSK+ +R IIVRD  RFH F  G CSC D+W
Sbjct: 945 NLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 166/606 (27%), Positives = 288/606 (47%), Gaps = 41/606 (6%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H  I+  GL   P   + ++   A+ G   S   A+K FD     +  S     + +
Sbjct: 132 EQIHARIICHGLLCSPIISNPLIGLYAKNGLIIS---ARKVFDNLCTKDSVS-----WVA 183

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +I G+S  G   EAI L+ E+   GI P  + F  VL+ CTK   F  G Q+H  + K G
Sbjct: 184 MISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYG 243

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
              + +V N L+  Y    + V   +VF +M  ++ VS+ SLI   A++     A+ LF 
Sbjct: 244 SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFT 303

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M  + +KP+ VT+  ++SACA    L  G+++ +Y+ + G+ ++ ++  AL+D+Y+ C 
Sbjct: 304 KMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCS 363

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            + TA ++F   +  N+VL N ++  + +L    E+  I  +M + G  P++ T  S + 
Sbjct: 364 DIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILR 423

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
               +G L  G   H  V++ G +    +C+ +IDMY K GK + A  I   ++   VVS
Sbjct: 424 TCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVS 483

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W +LI+                               G  Q N+F EA++ F+ ML+  I
Sbjct: 484 WTALIS-------------------------------GYAQHNLFAEALKHFKEMLNRGI 512

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           + D +      SAC  + AL+  + I+A    +G   D+ +  ALV ++ARCG  + A  
Sbjct: 513 QSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYL 572

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
            F +++ +D  +W   I   A  G  E A+++F +M R  ++     F   ++A ++   
Sbjct: 573 EFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIAN 632

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + QG  +  +M    G    I     ++    + G + +A      MP E NDV W +++
Sbjct: 633 IKQGKQI-HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMP-EKNDVSWNAMI 690

Query: 649 AACQKH 654
               +H
Sbjct: 691 TGYSQH 696



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 284/612 (46%), Gaps = 44/612 (7%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           N  +L E K+ H  ILK G G++    +K+V     +G  + +    K F     ++  +
Sbjct: 22  NSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVV---KVF-----EDMPN 73

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS-AFGEGVQ 159
            ++  ++ +I G+    +    + L+  +    + P + +F  VL AC+          Q
Sbjct: 74  RSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQ 133

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  I+  G      + N LI  Y + G I+  R+VFD +  ++ VSW ++I   ++   
Sbjct: 134 IHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGY 193

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            +EA++LF EM   GI P       V+S C K++  ++G+++ A + + G      + NA
Sbjct: 194 EEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNA 253

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           LV +Y +     +A+++F + + ++ V  N+++S   + G +  AL +  +M     +PD
Sbjct: 254 LVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPD 313

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            VT+ S +SA A  G L  G   H YV++ G+     +   ++D+Y+ C   + A  +F 
Sbjct: 314 CVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFL 373

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
               + VV W                               N ML    + +   E+  +
Sbjct: 374 TAQTENVVLW-------------------------------NVMLVAFGKLDNLSESFRI 402

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           FR M  + +  ++ T   +   C  +GALDL + I+  + K G   ++ + + L+DM+A+
Sbjct: 403 FRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAK 462

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
            G    A  + R + + DV +WTA I   A      +A++ F EML +GI+ D+I F   
Sbjct: 463 HGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSA 522

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           ++AC+    +NQG  +  + + + G S  +     +V L  R G + EA   ++   ++ 
Sbjct: 523 ISACAGIQALNQGRQI-HAQSYVSGYSEDLSIGNALVSLYARCGRIKEA--YLEFEKIDA 579

Query: 640 NDVI-WGSLLAA 650
            D I W  L++ 
Sbjct: 580 KDSISWNGLISG 591



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 249/525 (47%), Gaps = 38/525 (7%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI  +  T+ ++L+ C  S +  E  ++HG I+K+GF  +  + N L++ Y   GD+   
Sbjct: 5   GICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGV 64

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            +VF++M  R+V SW  +I     + +    + LF  M+EE + P  ++   V+ AC+  
Sbjct: 65  VKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGH 124

Query: 253 Q-NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +  +   +++ A I   G+  + ++ N L+ +Y K G + +A+++F     ++ V    +
Sbjct: 125 RIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAM 184

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +S + + G   EA+ +  EM   G  P      S +S   ++     G   H  V + G 
Sbjct: 185 ISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGS 244

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
                +CN ++ +Y +      A ++F  M +K  VS+NSLI+GL + G  + A E+F++
Sbjct: 245 SLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTK 304

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           M  RD+                              +K D VT+  + SAC   GAL   
Sbjct: 305 MK-RDY------------------------------LKPDCVTVASLLSACASNGALCKG 333

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           + +++Y+ K GI  DM +  AL+D++  C D + A ++F   +  +V  W   + A    
Sbjct: 334 EQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKL 393

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
            N  ++  +F +M  +G+ P+   +  +L  C+  G ++ G  +    T +     Q   
Sbjct: 394 DNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIH---TQVIKTGFQFNV 450

Query: 612 YGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           Y C  ++D+  + G L  A  +++++  E + V W +L++   +H
Sbjct: 451 YVCSVLIDMYAKHGKLDTAHVILRTL-TEDDVVSWTALISGYAQH 494



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 191/429 (44%), Gaps = 34/429 (7%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M   GI  N  T + ++  C    +L    ++   I +LG    +++ N LVD+Y   G 
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D   ++F +  +R++   + I+S ++   ++   L +   M+     P  ++  S + A
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 350 -SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
            S     +      H  ++ +GL     I N +I +Y K G    A ++FD++  K  VS
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W ++I+G  +NG                                 EEA+ LF  M +  I
Sbjct: 181 WVAMISGFSQNG-------------------------------YEEEAIHLFCEMHTAGI 209

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
                    V S C  +   D+ + ++A + K G   +  +  ALV +++R  +   A +
Sbjct: 210 FPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEK 269

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           VF +M+ +D  ++ + I  +A +G  + A+ELF +M R  +KPD +    +L+AC+  G 
Sbjct: 270 VFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGA 329

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + +G  L  S     G+S  ++  G ++DL      +  A ++  +   E N V+W  +L
Sbjct: 330 LCKGEQL-HSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE-NVVLWNVML 387

Query: 649 AACQKHQNV 657
            A  K  N+
Sbjct: 388 VAFGKLDNL 396


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 283/755 (37%), Positives = 412/755 (54%), Gaps = 36/755 (4%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           +Y+        LF +N L+ GY+  G   EA++LY  +   GI PD +TFP VL  C   
Sbjct: 149 WYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGL 208

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
                G +VH  +++ GF+ DV V N LI  Y +CGDI   R VFD M  R+ +SW ++I
Sbjct: 209 PDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMI 268

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
                 D+  E + LFF M E  + P+ +TM  VISAC  L +  LG  V  Y+ + G  
Sbjct: 269 SGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFV 328

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           A   + N+L+ M+   G  D A+ +F + + ++LV    ++S Y + GL  +A+     M
Sbjct: 329 AEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIM 388

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
              G  PD +T+ S +SA A LG L  G M H +  R GL  +  + N++IDMY KC   
Sbjct: 389 EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKC--- 445

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
              C                          ++ A EVF  +P ++ ISW +++ GL    
Sbjct: 446 --RC--------------------------IDKALEVFHRIPNKNVISWTSIILGLRLNY 477

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  F+ M+   +K + VT+V V SAC  +GAL   K I+A+  + G+  D  L  
Sbjct: 478 RSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN 536

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL+DM+ RCG  + A   F   EK DV++W   +   A +G G  AVELF++M+   + P
Sbjct: 537 ALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNP 595

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I F  +L ACS  G+V  G   F SM     ++P + HY  +VDLLGRAG L +A + 
Sbjct: 596 DEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEF 655

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           IK MP++P+  IWG+LL AC+ +QNV++   AA+ I E+D +  G ++LL N+YA +GKW
Sbjct: 656 IKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKW 715

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             VARVR  M+E  +   PG S +EV G+VH F +GD+ HP++  I+++L     ++   
Sbjct: 716 DEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEAT 775

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           G      +   D+D   K  +   HSE+LA+AFGLI+T    PI V KNL +C +CH+  
Sbjct: 776 GLSMSKDSRRDDID-ASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTV 834

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSD--FW 844
           K +SKV  R I VRD  +FH F+ G CSC D  +W
Sbjct: 835 KFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 259/536 (48%), Gaps = 43/536 (8%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  +L  C    A  EG +VH  + K      V + N L++ +   GD+V+   VF +M
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           +ER++ SW  L+   A+     EA+ L+  M+  GI+P+  T  CV+  C  L +L  G 
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            V  ++   G +++  +VNAL+ MY+KCG + +A+ +F     R+ +  N ++S Y    
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           +  E L +   M      PD +TM S +SA   LGD   GR  HGYV++ G     S+ N
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           ++I M+   G  + A  +F  M  K +VSW ++I+G  KNG           +P      
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG-----------LP------ 378

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                         E+A+E + +M  E +  D +T+  V SAC  LG LD    ++ + +
Sbjct: 379 --------------EKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFAD 424

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           + G+   + +A +L+DM+++C    +A++VF R+  ++V +WT+ I  + +     +A+ 
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF 484

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRSMTDIHGVSPQIVHYGCM 615
            F +M+   +KP+S+  V VL+AC+  G ++ G     H  R+     G  P       +
Sbjct: 485 FFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN-----AL 538

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           +D+  R G +  A +   S   E +   W  LL    +     +A     ++ E D
Sbjct: 539 LDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESD 592



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 232/482 (48%), Gaps = 42/482 (8%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES--LTYAQKAFDYYIKDNETSATLFMY 106
           ++ H +++K G   + S  + ++   + +G ++   + +++  F    KD      L  +
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEF----KD------LVSW 365

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
            ++I GY   GL  +A+  Y  +   G++PD+ T   VL+AC       +G+ +H    +
Sbjct: 366 TAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADR 425

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G    V V N LI+ Y +C  I     VF  +  +NV+SWTS+I          EA++ 
Sbjct: 426 TGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFF 485

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F +M+   +KPNSVT+V V+SACA++  L  G  + A+    G+  +  + NAL+DMY++
Sbjct: 486 FQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           CG ++ A   F  C ++++   N +++ Y + G    A+ +  +M+     PD +T  S 
Sbjct: 545 CGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL 603

Query: 347 VSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           + A ++ G +  G      M H + +   L+ + S+    +D+  + G+ E A      M
Sbjct: 604 LCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV----VDLLGRAGRLEDAYEFIKKM 659

Query: 402 S-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLGGLTQEN-MFEE 455
             +     W +L+       +VE    +A+ +F EM  +  + +  +L  L  ++  ++E
Sbjct: 660 PIDPDPAIWGALLNACRIYQNVELGELAAQHIF-EMDTKS-VGYYILLCNLYADSGKWDE 717

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
              + ++M   R+ VD          C +   +++A  ++A++  +  H  ++   A+++
Sbjct: 718 VARVRKIMRENRLTVD--------PGCSW---VEVAGQVHAFLTGDDFHPQIKEINAVLE 766

Query: 516 MF 517
            F
Sbjct: 767 GF 768



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N+++  L  +   E+A+     M   ++ V+  T + +   C +  A      +++Y+ K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
                 ++L  AL+ MF R GD   A  VF +M +RD+ +W   +G  A  G  ++A+ L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           ++ ML  GI+PD   F  VL  C  GGL
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTC--GGL 208


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/752 (35%), Positives = 428/752 (56%), Gaps = 37/752 (4%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           +S  L  +++++  ++   +G  A+  +V++   G  P+++ F     AC+ +     G 
Sbjct: 129 SSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGD 188

Query: 159 QVHGAIVKMGF-DRDVFVENCLINFYGEC-GDIVDGRRVFDEMSERNVVSWTSLICACAR 216
            + G ++K G+   DV V   LI+ + +  GD+V   +VF++M ERN V+WT +I    +
Sbjct: 189 SIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQ 248

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
                EA+ LF +M+  G +P+  T+  VISACA ++ L LG ++ +     G+  +  +
Sbjct: 249 FGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCV 308

Query: 277 VNALVDMYMKC---GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG-LAREALAILDEML 332
              L++MY KC   G++  A+++F +  D N+     +++ YV+ G    EAL +   M+
Sbjct: 309 GCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMI 368

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           L    P+  T  S + A A L  L  G     + ++ G    + + N++I MY + G+  
Sbjct: 369 LTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR-- 426

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
                                        ++ AR+ F  +  ++ IS+NT++    +   
Sbjct: 427 -----------------------------IDDARKAFDILFEKNLISYNTVIDAYAKNLN 457

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            EEA+ELF  +  + +     T   + S    +G +   + I+A + K+G+  +  +  A
Sbjct: 458 SEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNA 517

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+ M++RCG+ + A QVF  ME R+V +WT+ I   A  G   QA+ELF++ML +G++P+
Sbjct: 518 LISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPN 577

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + ++ VL+ACSH GLVN+GW  F+SM   HGV P++ HY C+VD+LGR+G L EA+  I
Sbjct: 578 EVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFI 637

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
            SMP + + ++W + L AC+ H N+++  +AA+ I E +P     ++LLSN+YAS  KW 
Sbjct: 638 NSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWD 697

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            V+ +R  MKE+ + K  G S +EV  KVH+F  GD SHP+   I   L+ ++ +++  G
Sbjct: 698 EVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLG 757

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           YVP+L  VL DV+E++K+ LL  HSEK+A+AFGLISTSK  PIRV KNLR+C DCHS  K
Sbjct: 758 YVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIK 817

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S    REIIVRD NRFH  + G CSC+++W
Sbjct: 818 YISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 248/519 (47%), Gaps = 50/519 (9%)

Query: 59  GLGHKPSYISKVVCT-CAQMGTF----ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGY 113
           G   K  Y+   VC  C  +  F      L  A K F+   + N  + TL +   +  GY
Sbjct: 192 GFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGY 251

Query: 114 SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDV 173
           +      EAI L++++   G  PD+FT   V++AC        G Q+H   ++ G   D 
Sbjct: 252 AG-----EAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306

Query: 174 FVENCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARRD-LPKEAVYLFFE 229
            V  CLIN Y +C   G +   R++FD++ + NV SWT++I    ++    +EA+ LF  
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+   + PN  T    + ACA L  L +G++V  +  +LG  +   + N+L+ MY + G 
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR 426

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A++ F    ++NL+  NT++  Y +   + EAL + +E+   G      T  S +S 
Sbjct: 427 IDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSG 486

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           +A +G +  G   H  V+++GL+   S+CN +I MY +CG  E A ++F+ M ++ V+SW
Sbjct: 487 AASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISW 546

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            S+I G  K+G                                  +A+ELF  ML E ++
Sbjct: 547 TSIITGFAKHG-------------------------------FATQALELFHKMLEEGVR 575

Query: 470 VDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
            + VT + V SAC ++G ++   K   +   ++G+   M+    +VD+  R G    A+Q
Sbjct: 576 PNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQ 635

Query: 529 VFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNE 563
               M  K D   W   +GA  + GN   G+ A ++  E
Sbjct: 636 FINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIE 674



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 251/540 (46%), Gaps = 38/540 (7%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +AIS    +   G  PD  T+   L  C ++ +F  G  VH  + +     D    N LI
Sbjct: 49  KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108

Query: 181 NFYGECGDIVDGRRVFDEM-SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           + Y +CG       +F  M S R+++SW++++   A  ++   A+  F +M+E G  PN 
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNALVDMYMKC-GAVDTAKQLF 297
                   AC+  + + +GD +  ++ + G ++++  +   L+DM++K  G + +A ++F
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
            +  +RN V    +++  ++ G A EA+ +  +M+  G  PDR T+   +SA A +  LL
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLL 288

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC---RIFDHMSNKTVVSWNSLIA 414
            G+  H   +R+GL     +   +I+MY KC      C   +IFD + +  V SW ++I 
Sbjct: 289 LGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMIT 348

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G ++ G             G D                 EEA++LFR M+   +  +  T
Sbjct: 349 GYVQKG-------------GYD-----------------EEALDLFRGMILTHVIPNHFT 378

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
                 AC  L AL + + ++ +  K G      +A +L+ M+AR G    A + F  + 
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           ++++ ++   I A A   N E+A+ELFNE+  QG+   +  F  +L+  +  G + +G  
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ 498

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +   +    G+         ++ +  R G +  A  + + M  + N + W S++    KH
Sbjct: 499 IHARVIK-SGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 211/461 (45%), Gaps = 41/461 (8%)

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           +A+     MV +G  P+  T    +  C + ++ ++G  V   + +  ++ +++ +N+L+
Sbjct: 49  KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108

Query: 282 DMYMKCGAVDTAKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
            +Y KCG  + A  +F      R+L+  + ++S +    +   AL    +M+ +G  P+ 
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFD 399
               +A  A +    +  G    G+V++ G L+    +   +IDM++K            
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVK------------ 216

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                               GD+ SA +VF +MP R+ ++W  M+  L Q     EA++L
Sbjct: 217 ------------------GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDL 258

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M+    + DR T+ GV SAC  +  L L + +++   ++G+  D  +   L++M+A+
Sbjct: 259 FLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAK 318

Query: 520 C---GDPQRAMQVFRRMEKRDVSAWTAAI-GAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           C   G    A ++F ++   +V +WTA I G +   G  E+A++LF  M+   + P+   
Sbjct: 319 CSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFT 378

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F   L AC++   +  G  +F     + G S        ++ +  R+G + +A      +
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRIDDARKAFDIL 437

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
             E N + + +++ A  K+ N   +  A E   E++ +  G
Sbjct: 438 -FEKNLISYNTVIDAYAKNLN---SEEALELFNEIEDQGMG 474


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/683 (38%), Positives = 395/683 (57%), Gaps = 64/683 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFD + E  ++ W ++    A    P  A+ L+  MV  G+ PNS T   ++ +CAK   
Sbjct: 59  VFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXA 118

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCG-------------------------- 288
            + G ++   + + G   +  +  +L+ MY++ G                          
Sbjct: 119 FKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITG 178

Query: 289 -----AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
                 +++A ++F E   +++V  N  +S Y   G  +EAL +  +M+    RPD  TM
Sbjct: 179 YASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTM 238

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           ++ +SA AQ G +  GR  H ++  +G      I N +ID+Y KCG              
Sbjct: 239 VTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCG-------------- 284

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                            ++E+A  +F  +  +D ISWNT++GG T  N+++EA+ LF+ M
Sbjct: 285 -----------------ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDM 327

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCG 521
           L    K + VTM+ + SAC +LGA+D+ +WI+ YI+K   G+     L T+L+DM+A+CG
Sbjct: 328 LRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 387

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           D + A QVF  M  R +S+W A I   AM G    A ++F+ M + GI+PD I FVG+L+
Sbjct: 388 DIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLS 447

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH G+++ G H+FRSMT  + + P++ HYGCM+DL G +GL  EA  +I +M +EP+ 
Sbjct: 448 ACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDG 507

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           VIW SLL AC+ H NV++    A+ + +++PE  G +VLLSNIYA+A +W  VA+ R  +
Sbjct: 508 VIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALL 567

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            ++G++K+PG SSIE++  VHEF  GD+ HP    I  ML EM   L +AG+VPD + VL
Sbjct: 568 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 627

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +++E+ K+  L HHSEKLA+AFGLIST     + +VKNLR+C +CH   KL+SK+Y RE
Sbjct: 628 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKRE 687

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           II RD  RFH FR G CSC+D+W
Sbjct: 688 IIARDRTRFHHFRDGECSCNDYW 710



 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 183/578 (31%), Positives = 304/578 (52%), Gaps = 73/578 (12%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           ++ PS+  L  CKTL  L+  H  ++K GL +    +SK++  C     F+ L YA   F
Sbjct: 1   RNHPSLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVF 60

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           D           L ++N++ RG++     V A+ LYV +   G+LP+ +TFPF+L +C K
Sbjct: 61  DTI-----QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           S AF EG Q+HG ++K GFD D+++   LI+ Y + G + D ++V D+ S R+VVS+T+L
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175

Query: 211 ICACARR-----------DLP--------------------KEAVYLFFEMVEEGIKPNS 239
           I   A R           ++P                    KEA+ LF +M++  ++P+ 
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            TMV V+SACA+  ++ELG +V ++I++ G   N  +VNAL+D+Y KCG ++TA  LF  
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
             +++++  NT++  Y  + L +EAL +  +ML  G +P+ VTMLS +SA A LG +  G
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIG 355

Query: 360 RMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
           R  H Y+ +   G+    S+  ++IDMY KCG  E A ++FD M N+++ SWN++I G  
Sbjct: 356 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
            +G   +A ++FS M                                   I+ D +T VG
Sbjct: 416 MHGRANAAFDIFSRMR-------------------------------KNGIEPDDITFVG 444

Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-K 535
           + SAC + G LDL + I+  + ++  +   ++    ++D+    G  + A ++   ME +
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEME 504

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            D   W + + A  M GN E        +++  I+P++
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESYAQNLIK--IEPEN 540



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 229/464 (49%), Gaps = 41/464 (8%)

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD---TAKQLFGE 299
           + ++  C  LQ+L +   + A + + G+      ++ L++  +     D    A  +F  
Sbjct: 6   LSLLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDT 62

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
            ++  L++ NT+   +        AL +   M+  G  P+  T    + + A+      G
Sbjct: 63  IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           +  HG VL+ G +    I  ++I MY++ G+ E A ++ D  S++ VVS+ +LI G    
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G +ESA ++F E+P +D +SWN  + G  +   ++EA+ELF+ M+   ++ D  TMV V 
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           SAC   G+++L + ++++I  +G   ++++  AL+D++++CG+ + A  +F+ +  +DV 
Sbjct: 243 SACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVI 302

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-W-HLF- 596
           +W   IG        ++A+ LF +MLR G KP+ +  + +L+AC+H G ++ G W H++ 
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYI 362

Query: 597 --------------RSMTDIHG---------------VSPQIVHYGCMVDLLGRAGLLGE 627
                          S+ D++                ++  +  +  M+      G    
Sbjct: 363 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANA 422

Query: 628 ALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
           A D+   M    +EP+D+ +  LL+AC     +D+  +    +T
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 28/260 (10%)

Query: 25  KAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILK--QGLGHKPSYISKVVCTCAQMGT 79
           ++   P D   +  L  C  L  +   +  H +I K  +G+ +  S  + ++   A+ G 
Sbjct: 329 RSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 388

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
            E+   AQ+ FD  +  + +S     +N++I G++  G    A  ++  +   GI PD  
Sbjct: 389 IEA---AQQVFDSMLNRSLSS-----WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE----NCLINFYGECGDIVDGRRV 195
           TF  +L+AC+ S     G  +  ++ +   D  +  +     C+I+  G  G   +  ++
Sbjct: 441 TFVGLLSACSHSGMLDLGRHIFRSMTR---DYKLMPKLEHYGCMIDLXGHSGLFKEAEKM 497

Query: 196 FDEMS-ERNVVSWTSLICACARR---DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            + M  E + V W SL+ AC      +L +       ++  E   P S  ++  I A A+
Sbjct: 498 INTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPE--NPGSYVLLSNIYATAE 555

Query: 252 LQNLELGDRVCAYIDELGMK 271
             N     R  A +++ GMK
Sbjct: 556 RWNEVAKTR--ALLNDKGMK 573


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/683 (38%), Positives = 401/683 (58%), Gaps = 64/683 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF+ + E N + W ++I   A    P  ++ L+  MV  G+ PNS T   ++ +CAK + 
Sbjct: 20  VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKC--------------------------- 287
              G ++   + +LG   +  +  +L+ MY++                            
Sbjct: 80  FTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG 139

Query: 288 ----GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
               G + +A++LF E   +++V  N ++S Y   G  +EAL + +EM+    RPD  T 
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           ++ +SA A  G +  GR  H +V  +G +    I N +ID+Y KCG              
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG-------------- 245

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                            +VE+A  +F  +  +D ISWNT++GG T  N+++EA+ LF+ M
Sbjct: 246 -----------------EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEM 288

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCG 521
           L      + VTM+ V  AC +LGA+D+ +WI+ YI+K   G+     L T+L+DM+A+CG
Sbjct: 289 LRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 348

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           D + A QVF  M  + +S+W A I   AM G  + + +LF+ M + GI+PD I FVG+L+
Sbjct: 349 DIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLS 408

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH G+++ G H+FRSMT  + ++P++ HYGCM+DLLG +GL  EA ++I +M +EP+ 
Sbjct: 409 ACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 468

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           VIW SLL AC+ H NV++A   A+ + +++PE    ++LLSNIYASAG+W +VAR+R  +
Sbjct: 469 VIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALL 528

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
             + ++K+PG SSIEV+  V EF  GD+ HP+   I  ML EM   L +AG+VPD + VL
Sbjct: 529 NGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVL 588

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +++E+ K+  L HHSEKLA+AFGLIST     + +VKNLR+C +CH   KL+SK+Y RE
Sbjct: 589 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKRE 648

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+ RD  RFH FR G CSC+D+W
Sbjct: 649 IVARDRTRFHHFRDGVCSCNDYW 671



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 169/535 (31%), Positives = 282/535 (52%), Gaps = 73/535 (13%)

Query: 74  CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
           C     F+ L YA   F+   + N+      ++N++IRG++     V +++LYV +   G
Sbjct: 5   CVPSPHFDGLPYATSVFETIQEPNQ-----LIWNTMIRGHALSSDPVSSLTLYVCMVSLG 59

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +LP+ +TFPF+L +C KS  F EG Q+HG ++K+GFD D++V   LI+ Y +   + D  
Sbjct: 60  LLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAY 119

Query: 194 RVFDEMSERNVVSWTSLICACARR-----------DLP--------------------KE 222
           +VFD  S R+VVS+T+LI   A R           ++P                    KE
Sbjct: 120 KVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKE 179

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+ LF EM++  ++P+  T V V+SACA   ++ELG +V +++D+ G  +N  +VNAL+D
Sbjct: 180 ALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALID 239

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           +Y KCG V+TA  LF     ++++  NT++  Y  + L +EAL +  EML  G  P+ VT
Sbjct: 240 LYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 299

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           MLS + A A LG +  GR  H Y+ +   G+    S+  ++IDMY KCG  E A ++F+ 
Sbjct: 300 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 359

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M +K++ SWN++I G   +G  +++ ++FS M           +G               
Sbjct: 360 MLHKSLSSWNAMIFGFAMHGRADASFDLFSRM---------RKIG--------------- 395

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
                  I+ D +T VG+ SAC + G LDL + I+  + ++  +   ++    ++D+   
Sbjct: 396 -------IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 448

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            G  + A ++   ME + D   W + + A  M GN E A      +++  I+P++
Sbjct: 449 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIK--IEPEN 501



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 213/412 (51%), Gaps = 35/412 (8%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F   ++ N ++ NT++  +        +L +   M+  G  P+  T    + + A+
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
                 G+  HG VL+ G +    +  ++I MY++  + E A ++FD  S++ VVS+ +L
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I G    GD+ SA+++F E+P +D +SWN M+ G  +   ++EA+ELF  M+   ++ D 
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            T V V SAC + G+++L + ++++++ +G   ++++  AL+D++++CG+ + A  +F+ 
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +  +DV +W   IG        ++A+ LF EMLR G  P+ +  + VL AC+H G ++ G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316

Query: 593 -W-HLF---------------RSMTDI----------HGVSPQIVH-----YGCMV---D 617
            W H++                S+ D+          H V   ++H     +  M+    
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 376

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
           + GRA    +    ++ + +EP+D+ +  LL+AC     +D+  +    +T+
Sbjct: 377 MHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 428


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/584 (41%), Positives = 366/584 (62%), Gaps = 31/584 (5%)

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           D A ++F    + N+ + N ++   +      +A+     M++   RP++ T  +   A 
Sbjct: 84  DFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKAC 142

Query: 351 AQLGDLLCGRMCHGYVLRNGLEG-----------------------------WDSIC-NT 380
           +    +  GR  HG+V+++G+                                D +C NT
Sbjct: 143 SVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNT 202

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           MID Y+KCG  E A  +F  M  K + SWN +I GL K G++  AR++F EM  RD ISW
Sbjct: 203 MIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISW 262

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           ++M+ G      ++EA+E+F+ M  E  +  R  +  V +AC  +GA+D  +W++AY+++
Sbjct: 263 SSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           N I  D  L TAL+DM+A+CG      +VF  M++R++  W A IG +A+ G  E A+EL
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALEL 382

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F+++    +KP+ I  VGVLTAC+H G V++G  +F++M + +GV P++ HYGCMVDLLG
Sbjct: 383 FSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLG 442

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           R+GL  EA DLI SMP++PN  +WG+LL AC+ H N D+A    + + EL+P+ SG +VL
Sbjct: 443 RSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVL 502

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSNIYA  G++ +V+++R  MK++GI+ +PG S +++NG VHEF  GD SHP+M  I   
Sbjct: 503 LSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRK 562

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L+ +  RL+ AG+ PD + VL D+DE+EK+  +++HSEKLA+AFGLI+T     I +VKN
Sbjct: 563 LKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKN 622

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCHS  KL+S+++DREIIVRD  R+H F+ G+CSC DFW
Sbjct: 623 LRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 251/558 (44%), Gaps = 92/558 (16%)

Query: 7   PSPL--VLATPTVTTLTNQHKAKTTPK--DSPSIGSLKNCKTLNELKQPHCHILKQGLGH 62
           PSP   V  +      T++   KT  K  DS SI SL+       L Q H  +L+ G   
Sbjct: 10  PSPFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQY------LTQLHGLVLRSG-HF 62

Query: 63  KPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEA 122
           +  Y+S  +  C     F +  +A K F      N     +F++N +I+G        +A
Sbjct: 63  QDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPN-----VFIWNIVIKGCLENNKLFKA 117

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           I  Y  +      P+KFT+P +  AC+ + A  EG Q+HG +VK G   DV +++  I+ 
Sbjct: 118 IYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHM 176

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y   G + D R++F    E +VV W ++I    +  + + A  LF +M  + I   +V  
Sbjct: 177 YASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNV-- 233

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
                                            M+N L     K G +  A++LF E  +
Sbjct: 234 ---------------------------------MINGLA----KGGNLGDARKLFDEMSE 256

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R+ +  ++++  Y+  G  +EAL I  +M     RP R  + S ++A + +G +  GR  
Sbjct: 257 RDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWV 316

Query: 363 HGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
           H Y+ RN ++  D++  T ++DMY KCG+ +M   +F+ M  + + +WN++I GL  +G 
Sbjct: 317 HAYLKRNSIK-LDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGR 375

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
            E A E+FS++                QE                R+K + +T+VGV +A
Sbjct: 376 AEDALELFSKL----------------QEG---------------RMKPNGITLVGVLTA 404

Query: 482 CGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVS 539
           C + G +D    I+  + E  G+  +++    +VD+  R G    A  +   M  K + +
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464

Query: 540 AWTAAIGAMAMEGNGEQA 557
            W A +GA  + GN + A
Sbjct: 465 VWGALLGACRIHGNFDLA 482



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 143/353 (40%), Gaps = 54/353 (15%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMK--CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
           HG VLR+G      +   ++  Y        + A ++F  + N  V  WN +I G ++N 
Sbjct: 53  HGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN- 111

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
                                          +F+      R+++  R   ++ T   +  
Sbjct: 112 -----------------------------NKLFKAIYFYGRMVIDAR--PNKFTYPTLFK 140

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC    A+   + I+ ++ K+GI  D+ + +A + M+A  G  + A ++F   E  DV  
Sbjct: 141 ACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGES-DVVC 199

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W   I      G  E A  LF +M  + I   +++  G+    + GG +     LF  M+
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGL----AKGGNLGDARKLFDEMS 255

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQKHQNV 657
           +   +S     +  MVD    AG   EAL++ + M  E   P   I  S+LAAC     +
Sbjct: 256 ERDEIS-----WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAI 310

Query: 658 D----IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           D    + AY      +LD   + +   L ++YA  G+      V  +MKE+ I
Sbjct: 311 DQGRWVHAYLKRNSIKLD---AVLGTALLDMYAKCGRLDMGWEVFEEMKEREI 360


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/557 (44%), Positives = 356/557 (63%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G++  A+ +F      N  + NT++  Y       EAL +   ML H    +  T    +
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A + +      +  H ++++ G        N+++++Y K G  + A  +FD +  +  V
Sbjct: 126 KACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SWNS+I G  K G++E A E+F+ MP R+ ISW +M+ G       +EA+ LF  M +  
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           IK+D V +V    AC  LG LD  KWI+AYI+K+ I  D  L   L+DM+A+CGD + A+
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           +VFR+ME++ VS WTA I   A+ G G +A+E F +M   G++P+ + F G+LTACSH G
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV++   LF SM  IHG  P I HYGCMVDLLGRAGLL EA +LI++MPV+PN  IWG+L
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC  H N+++     + + ++DP   G ++ L++I+A+AG+W   ARVR QMKEQG+ 
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           KLPG S I VNG  HEF +GDESHP++  I  ML ++  RLR+ GY P L ++LLD++++
Sbjct: 486 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDK 545

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+  + HHSEKLA+ FGLIST   M IR+VKNLR+C DCH+  KL+SKVY REI++RD 
Sbjct: 546 EKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDR 605

Query: 828 NRFHFFRQGSCSCSDFW 844
            RFH F+ G+C+C D+W
Sbjct: 606 TRFHLFKDGNCTCGDYW 622



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 222/455 (48%), Gaps = 54/455 (11%)

Query: 11  VLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV 70
           +L TPT    +  + A+T       +  L+ C  + EL+Q H  +LK GL       SK+
Sbjct: 4   ILCTPTSQLSSESNAAQT-------LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKL 56

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           +  CA   +  SL YA+  FD   + N      FM+N++IRGYS      EA+ LY  + 
Sbjct: 57  LAFCASPNS-GSLAYARTVFDRIFRPNT-----FMWNTMIRGYSNSKEPEEALLLYHHML 110

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
              +  + +TFPF+L AC+  SA  E  Q+H  I+KMGF  +++  N L+N Y + GDI 
Sbjct: 111 YHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIK 170

Query: 191 DGRRVFDE-------------------------------MSERNVVSWTSLICACARRDL 219
             R +FD+                               M ERN++SWTS+I  C     
Sbjct: 171 SARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGK 230

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
           PKEA+ LF  M   GIK ++V +V  + ACA L  L+ G  + AYI +  ++ + ++   
Sbjct: 231 PKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCV 290

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+DMY KCG ++ A ++F + +++ + +   ++S Y   G  REAL    +M   G  P+
Sbjct: 291 LIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPN 350

Query: 340 RVTMLSAVSASAQLG-----DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           ++T    ++A +  G      LL   M   +  +  +E +      M+D+  + G  + A
Sbjct: 351 QMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY----GCMVDLLGRAGLLKEA 406

Query: 395 CRIFDHMSNKTVVS-WNSLIAGLIKNGDVESAREV 428
             + ++M  K   + W +L+     +G++E  +++
Sbjct: 407 EELIENMPVKPNAAIWGALLNACHIHGNLELGKQI 441



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 219/498 (43%), Gaps = 68/498 (13%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE--CGDIVDGRRVFDEMSE 201
            L+   + S   E  Q+HG ++K G   D    + L+ F      G +   R VFD +  
Sbjct: 21  TLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            N   W ++I   +    P+EA+ L+  M+   +  N+ T   ++ AC+ +   E   ++
Sbjct: 81  PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQI 140

Query: 262 CAYIDELGMKA-----NALM--------------------------VNALVDMYMKCGAV 290
            A+I ++G  +     N+L+                           N+++D Y KCG +
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           + A ++F    +RN++   +++S  V  G  +EAL +   M   G + D V ++S + A 
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           A LG L  G+  H Y+ ++ +E    +   +IDMY KCG  E A  +F  M  K V  W 
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++I+G   +G             GR                   EA+E F  M +  ++ 
Sbjct: 321 AMISGYAIHGR------------GR-------------------EALEWFMKMQTAGVEP 349

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQV 529
           +++T  G+ +AC + G +  AK ++  +E+ +G    ++    +VD+  R G  + A ++
Sbjct: 350 NQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEEL 409

Query: 530 FRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
              M  K + + W A + A  + GN E   ++  ++L Q        ++ + +  +  G 
Sbjct: 410 IENMPVKPNAAIWGALLNACHIHGNLELGKQI-GKILIQVDPGHGGRYIHLASIHAAAGE 468

Query: 589 VNQGWHLFRSMTDIHGVS 606
            NQ   + R M +  GVS
Sbjct: 469 WNQAARVRRQMKE-QGVS 485


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/584 (41%), Positives = 365/584 (62%), Gaps = 31/584 (5%)

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           D A ++F    + N+ + N ++   +      +A+     M++   RP++ T  +   A 
Sbjct: 84  DFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKAC 142

Query: 351 AQLGDLLCGRMCHGYVLRNGLEG-----------------------------WDSIC-NT 380
           +    +  GR  HG+V+++G+                                D +C NT
Sbjct: 143 SVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNT 202

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           MID Y+KCG  E A  +F  M  K + SWN +I GL K G++  AR++F EM  RD ISW
Sbjct: 203 MIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISW 262

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           ++M+ G      ++EA+E+F+ M  E  +  R  +  V +AC  +GA+D  +W++AY+++
Sbjct: 263 SSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           N I  D  L TAL+DM+A+CG      +VF  M++R++  W A IG +A+ G  E A+EL
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALEL 382

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F+++    +KP+ I  VGVLTAC+H G V++G  +F++M + +GV P++ HYGCMVDLLG
Sbjct: 383 FSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLG 442

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           R+GL  EA DLI SMP++PN  +WG+LL AC+ H N D+A    + + EL+P+ SG +VL
Sbjct: 443 RSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVL 502

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSNIYA  G++ +V+++R  MK +GI+ +PG S +++NG VHEF  GD SHP+M  I   
Sbjct: 503 LSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRK 562

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L+ +  RL+ AG+ PD + VL D+DE+EK+  +++HSEKLA+AFGLI+T     I +VKN
Sbjct: 563 LKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKN 622

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCHS  KL+S+++DREIIVRD  R+H F+ G+CSC DFW
Sbjct: 623 LRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 250/558 (44%), Gaps = 92/558 (16%)

Query: 7   PSPL--VLATPTVTTLTNQHKAKTTPK--DSPSIGSLKNCKTLNELKQPHCHILKQGLGH 62
           PSP   V  +      T++   KT  K  DS SI SL+       L Q H  +L+ G   
Sbjct: 10  PSPFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQY------LTQLHALVLRSG-HF 62

Query: 63  KPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEA 122
           +  Y+S  +  C     F +  +A K F      N     +F++N +I+G        +A
Sbjct: 63  QDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPN-----VFIWNIVIKGCLENNKLFKA 117

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           I  Y  +      P+KFT+P +  AC+ + A  EG Q+HG +VK G   DV +++  I  
Sbjct: 118 IYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQM 176

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y   G + D R++F    E +VV W ++I    +  + + A  LF +M  + I   +V  
Sbjct: 177 YASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNV-- 233

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
                                            M+N L     K G +  A++LF E  +
Sbjct: 234 ---------------------------------MINGLA----KGGNLGDARKLFDEMSE 256

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R+ +  ++++  Y+  G  +EAL I  +M     RP R  + S ++A + +G +  GR  
Sbjct: 257 RDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWV 316

Query: 363 HGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
           H Y+ RN ++  D++  T ++DMY KCG+ +M   +F+ M  + + +WN++I GL  +G 
Sbjct: 317 HAYLKRNSIK-LDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGR 375

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
            E A E+FS++                QE                R+K + +T+VGV +A
Sbjct: 376 AEDALELFSKL----------------QEG---------------RMKPNGITLVGVLTA 404

Query: 482 CGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVS 539
           C + G +D    I+  + E  G+  +++    +VD+  R G    A  +   M  K + +
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464

Query: 540 AWTAAIGAMAMEGNGEQA 557
            W A +GA  + GN + A
Sbjct: 465 VWGALLGACRIHGNFDLA 482



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 142/353 (40%), Gaps = 54/353 (15%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMK--CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
           H  VLR+G      +   ++  Y        + A ++F  + N  V  WN +I G ++N 
Sbjct: 53  HALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN- 111

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
                                          +F+      R+++  R   ++ T   +  
Sbjct: 112 -----------------------------NKLFKAIYFYGRMVIDAR--PNKFTYPTLFK 140

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC    A+   + I+ ++ K+GI  D+ + +A + M+A  G  + A ++F   E  DV  
Sbjct: 141 ACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGES-DVVC 199

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W   I      G  E A  LF +M  + I   +++  G+    + GG +     LF  M+
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGL----AKGGNLGDARKLFDEMS 255

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQKHQNV 657
           +   +S     +  MVD    AG   EAL++ + M  E   P   I  S+LAAC     +
Sbjct: 256 ERDEIS-----WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAI 310

Query: 658 D----IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           D    + AY      +LD   + +   L ++YA  G+      V  +MKE+ I
Sbjct: 311 DQGRWVHAYLKRNSIKLD---AVLGTALLDMYAKCGRLDMGWEVFEEMKEREI 360


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/751 (37%), Positives = 410/751 (54%), Gaps = 34/751 (4%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           +Y+        LF +N L+ GY+  G   EA++LY  +   GI PD +TFP VL  C   
Sbjct: 149 WYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGL 208

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
                G +VH  +++ GF+ DV V N LI  Y +CGDI   R VFD M  R+ +SW ++I
Sbjct: 209 PDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMI 268

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
                 D+  E + LFF M E  + P+ +TM  VISAC  L +  LG  V  Y+ + G  
Sbjct: 269 SGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFV 328

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           A   + N+L+ M+   G  D A+ +F + + ++LV    ++S Y + GL  +A+     M
Sbjct: 329 AEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIM 388

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
              G  PD +T+ S +SA A LG L  G M H +  R GL  +  + N++IDMY KC   
Sbjct: 389 EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKC--- 445

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
              C                          ++ A EVF  +P ++ ISW +++ GL    
Sbjct: 446 --RC--------------------------IDKALEVFHRIPNKNVISWTSIILGLRLNY 477

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  F+ M+   +K + VT+V V SAC  +GAL   K I+A+  + G+  D  L  
Sbjct: 478 RSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN 536

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL+DM+ RCG  + A   F   EK DV++W   +   A +G G  AVELF++M+   + P
Sbjct: 537 ALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNP 595

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I F  +L ACS  G+V  G   F SM     ++P + HY  +VDLLGRAG L +A + 
Sbjct: 596 DEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEF 655

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           IK MP++P+  IWG+LL AC+ +QNV++   AA+ I E+D +  G ++LL N+YA +GKW
Sbjct: 656 IKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKW 715

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             VARVR  M+E  +   PG S +EV G+VH F +GD+ HP++  I+++L     ++   
Sbjct: 716 DEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEAT 775

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           G      +   D+D   K  +   HSE+LA+AFGLI+T    PI V KNL +C +CH+  
Sbjct: 776 GLSMSKDSRRDDID-ASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTV 834

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           K +SKV  R I VRD  +FH F+ G CSC D
Sbjct: 835 KFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 259/536 (48%), Gaps = 43/536 (8%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  +L  C    A  EG +VH  + K      V + N L++ +   GD+V+   VF +M
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           +ER++ SW  L+   A+     EA+ L+  M+  GI+P+  T  CV+  C  L +L  G 
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            V  ++   G +++  +VNAL+ MY+KCG + +A+ +F     R+ +  N ++S Y    
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           +  E L +   M      PD +TM S +SA   LGD   GR  HGYV++ G     S+ N
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           ++I M+   G  + A  +F  M  K +VSW ++I+G  KNG           +P      
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG-----------LP------ 378

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                         E+A+E + +M  E +  D +T+  V SAC  LG LD    ++ + +
Sbjct: 379 --------------EKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFAD 424

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           + G+   + +A +L+DM+++C    +A++VF R+  ++V +WT+ I  + +     +A+ 
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF 484

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRSMTDIHGVSPQIVHYGCM 615
            F +M+   +KP+S+  V VL+AC+  G ++ G     H  R+     G  P       +
Sbjct: 485 FFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN-----AL 538

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           +D+  R G +  A +   S   E +   W  LL    +     +A     ++ E D
Sbjct: 539 LDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESD 592



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 232/482 (48%), Gaps = 42/482 (8%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES--LTYAQKAFDYYIKDNETSATLFMY 106
           ++ H +++K G   + S  + ++   + +G ++   + +++  F    KD      L  +
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEF----KD------LVSW 365

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
            ++I GY   GL  +A+  Y  +   G++PD+ T   VL+AC       +G+ +H    +
Sbjct: 366 TAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADR 425

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G    V V N LI+ Y +C  I     VF  +  +NV+SWTS+I          EA++ 
Sbjct: 426 TGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFF 485

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F +M+   +KPNSVT+V V+SACA++  L  G  + A+    G+  +  + NAL+DMY++
Sbjct: 486 FQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           CG ++ A   F  C ++++   N +++ Y + G    A+ +  +M+     PD +T  S 
Sbjct: 545 CGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL 603

Query: 347 VSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           + A ++ G +  G      M H + +   L+ + S+    +D+  + G+ E A      M
Sbjct: 604 LCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV----VDLLGRAGRLEDAYEFIKKM 659

Query: 402 S-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLGGLTQEN-MFEE 455
             +     W +L+       +VE    +A+ +F EM  +  + +  +L  L  ++  ++E
Sbjct: 660 PIDPDPAIWGALLNACRIYQNVELGELAAQHIF-EMDTKS-VGYYILLCNLYADSGKWDE 717

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
              + ++M   R+ VD          C +   +++A  ++A++  +  H  ++   A+++
Sbjct: 718 VARVRKIMRENRLTVD--------PGCSW---VEVAGQVHAFLTGDDFHPQIKEINAVLE 766

Query: 516 MF 517
            F
Sbjct: 767 GF 768



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N+++  L  +   E+A+     M   ++ V+  T + +   C +  A      +++Y+ K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
                 ++L  AL+ MF R GD   A  VF +M +RD+ +W   +G  A  G  ++A+ L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           ++ ML  GI+PD   F  VL  C  GGL
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTC--GGL 208


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 271/762 (35%), Positives = 416/762 (54%), Gaps = 36/762 (4%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A++ FD    +    + + ++ +L+ GY+  G   E + L+ ++   G+ PD +T  
Sbjct: 145 LENARRVFD----EMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTIS 200

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL       +  +G  VHG + K+GF     V N L+ FY +     D   VFD M  R
Sbjct: 201 CVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHR 260

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           +V+SW S+I  C    L  +A+ LF  M  EG + +S T++ V+ ACA+L  L LG  V 
Sbjct: 261 DVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVH 320

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
            Y  + G  +   + N L+DMY  C    +  ++F     +N+V    ++++Y R GL  
Sbjct: 321 GYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYD 380

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +   +  EM L G RPD   + SA+ A A    L  G+  HGY +RNG+E   ++ N ++
Sbjct: 381 KVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALM 440

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           +MY+KCG                               ++E A+ +F  +  +D ISWNT
Sbjct: 441 EMYVKCG-------------------------------NMEEAKLIFDGVVSKDMISWNT 469

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           ++GG ++ N+  EA  LF  ML + ++ + VTM  +  A   L +L+  + ++AY  + G
Sbjct: 470 LIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRG 528

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
              D  +A AL+DM+ +CG    A ++F R+  +++ +WT  +    M G G  A+ LF 
Sbjct: 529 YLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFE 588

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           +M   GI PD+  F  +L ACSH GL ++GW  F +M   H + P++ HY CMVDLL   
Sbjct: 589 QMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINT 648

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G L EA + I SMP+EP+  IW SLL  C+ H+NV +A   AER+ EL+PE +G +VLL+
Sbjct: 649 GNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLA 708

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           NIYA A +W  V +++ ++  +G+R+  G S IE  GKVH F + + +HP+   I+  L 
Sbjct: 709 NIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLN 768

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           E+  R+++ G+ P     L+  D       L  HS KLA+AFG+++ S+   IRV KN R
Sbjct: 769 EVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSR 828

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C  CH  AK +SK+  REII+RD+NRFH F QG CSC  +W
Sbjct: 829 VCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 248/551 (45%), Gaps = 40/551 (7%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF---VENCLINFYGECGDIVDGR 193
           D  ++  VL  C++  +   G + H  +      RD     +   L+  Y +CGD+ + R
Sbjct: 90  DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENAR 149

Query: 194 RVFDEMSE-RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           RVFDEM +  +V  WT+L+   A+    +E V LF +M   G++P++ T+ CV+   A L
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            ++E G+ V   +++LG  +   + NAL+  Y K      A  +F     R+++  N+++
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           S     GL  +A+ +   M L G   D  T+LS + A A+L  L  GR+ HGY ++ G  
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFI 329

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
              S+ N ++DMY  C       +IF +M  K VVSW ++I    + G            
Sbjct: 330 SQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAG------------ 377

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                              ++++   LF+ M  E  + D   +     A      L   K
Sbjct: 378 -------------------LYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGK 418

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++ Y  +NG+   + +  AL++M+ +CG+ + A  +F  +  +D+ +W   IG  +   
Sbjct: 419 SVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNN 478

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
              +A  LF EML Q ++P+++    +L A +    + +G  +         +    V  
Sbjct: 479 LANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFV-A 536

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH-QNVD-IAAYAAERITEL 670
             ++D+  + G L  A  L   +    N + W  ++A    H +  D IA +   R++ +
Sbjct: 537 NALIDMYVKCGALLLARRLFDRLS-NKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGI 595

Query: 671 DPEKSGVHVLL 681
            P+ +    +L
Sbjct: 596 APDAASFSAIL 606



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 16/205 (7%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P+  SL    +L   ++ H + L++G        + ++    + G   +L  A++ FD  
Sbjct: 506 PAAASLS---SLERGREMHAYALRRGYLEDDFVANALIDMYVKCG---ALLLARRLFDRL 559

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
              N  S T+     ++ GY   G G +AI+L+ ++   GI PD  +F  +L AC+ S  
Sbjct: 560 SNKNLISWTI-----MVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGL 614

Query: 154 FGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLI 211
             EG +   A+ K    +  +    C+++     G++ +     D M  E +   W SL+
Sbjct: 615 RDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLL 674

Query: 212 CACA-RRD--LPKEAVYLFFEMVEE 233
             C   R+  L +E     FE+  E
Sbjct: 675 RGCRIHRNVKLAEEVAERVFELEPE 699


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/712 (36%), Positives = 395/712 (55%), Gaps = 29/712 (4%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+  +  TF  VLN+     A  +G  +H  + +     DVFV   L+N Y +CG + D 
Sbjct: 5   GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R+VFD M  R+V +W S+I A +  +   EA ++F  M  EG + + VT + ++ AC   
Sbjct: 65  RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
           +NL+ G  V   I E   + +  +  AL+ MY +C + + A Q+FG  K +NL+  + I+
Sbjct: 125 ENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAII 184

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           + +   G   EAL     M   G  P+RVT +S ++       L      H  +  +GL+
Sbjct: 185 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
              ++ N ++++Y +C                             + G+++ A  +  EM
Sbjct: 245 DTTTMSNALVNVYGRC-----------------------------ETGELDVAEVILQEM 275

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             +   +WN ++ G T      EA+E ++ +  E I VD+VT + V +AC    +L   K
Sbjct: 276 DEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGK 335

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I++   + G+  D+ +  AL +M+++CG  + A ++F  M  R   +W   + A A  G
Sbjct: 336 MIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHG 395

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
             E+ ++L  +M ++G+K + I FV VL++CSH GL+ +G   F S+    G+  +  HY
Sbjct: 396 ESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHY 455

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GC+VDLLGRAG L EA   I  MP EP  V W SLL AC+ H+++D    AA ++ ELDP
Sbjct: 456 GCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDP 515

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
             S   V+LSNIY+  G W N A++R  M  + ++K+PG SSI+V  KVHEF   D SHP
Sbjct: 516 GNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHP 575

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
               I   + E+   +R+AGYVPD   VL DVDE++K+ LL++HSEKLA+AFGLIST + 
Sbjct: 576 RAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEK 635

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             + + KNLR+C DCH+  K +SK+  REI+VRDN+RFH FR GSCSC D+W
Sbjct: 636 SSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 217/470 (46%), Gaps = 40/470 (8%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SLT A+K FD          ++  +NS+I  YS      EA  ++  +   G   D+ TF
Sbjct: 60  SLTDARKVFD-----GMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTF 114

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L+AC        G  V  +I +  F+ D+FV   LI  Y  C    +  +VF  M +
Sbjct: 115 LSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQ 174

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           +N+++W+++I A A      EA+  F  M +EGI PN VT + +++       LE   R+
Sbjct: 175 KNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI 234

Query: 262 CAYIDELGMKANALMVNALVDMYMKC--GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
              I E G+     M NALV++Y +C  G +D A+ +  E  ++ +   N +++ Y   G
Sbjct: 235 HLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHG 294

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
            +REAL     + L     D+VT +S ++A      L  G+M H   +  GL+    + N
Sbjct: 295 RSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKN 354

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            + +MY KCG  E A RIFD M  ++ VSWN ++    ++G+                  
Sbjct: 355 ALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGES----------------- 397

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYI 498
                         EE ++L R M  E +K++ +T V V S+C + G + +  ++ ++  
Sbjct: 398 --------------EEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLG 443

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGA 547
              GI    +    LVD+  R G  Q A +   +M    ++  W + +GA
Sbjct: 444 HDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 189/427 (44%), Gaps = 35/427 (8%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+ EG+K N +T + V+++      L  G  + + + E     +  +  ALV+ Y KCG+
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +  A+++F     R++   N+++S Y     + EA  I   M   G R DRVT LS + A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                +L  G+     +     E    +   +I MY +C   E A ++F  M  K +++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           +++I     +G                                  EA+  FR+M  E I 
Sbjct: 181 SAIITAFADHGHC-------------------------------GEALRYFRMMQQEGIL 209

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC--GDPQRAM 527
            +RVT + + +       L+    I+  I ++G+     ++ ALV+++ RC  G+   A 
Sbjct: 210 PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAE 269

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            + + M+++ ++AW   I    + G   +A+E +  +  + I  D + F+ VL AC+   
Sbjct: 270 VILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSST 329

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
            + +G  +  +  +  G+   ++    + ++  + G +  A  +  SMP+  + V W  +
Sbjct: 330 SLAEGKMIHSNAVEC-GLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGM 387

Query: 648 LAACQKH 654
           L A  +H
Sbjct: 388 LQAYAQH 394


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/795 (35%), Positives = 426/795 (53%), Gaps = 38/795 (4%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H   +  G G      + +V   A  G F  +  A++ FD    +  +      +N L
Sbjct: 28  QVHAMAMATGFGSDVFVANALV---AMYGGFGFMDDARRVFD----EAGSERNAVSWNGL 80

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           +  Y       +AI ++ E+   GI P +F F  V+NACT S     G QVH  +V+MG+
Sbjct: 81  MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGY 140

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           ++DVF  N L++ Y + G +     +F++M + +VVSW +LI  C        A+ L  +
Sbjct: 141 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 200

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M   G+ PN   +  ++ ACA     +LG ++  ++ +    ++  +   LVDMY K   
Sbjct: 201 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 260

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A ++F     R+L+L N ++S     G   EA +I   +   G   +R T+ + + +
Sbjct: 261 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           +A L      R  H    + G      + N +ID Y KC     A R+F+  S+      
Sbjct: 321 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS------ 374

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                     GD+               I+  +M+  L+Q +  E A++LF  ML + ++
Sbjct: 375 ----------GDI---------------IAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 409

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +  + +AC  L A +  K ++A++ K     D     ALV  +A+CG  + A   
Sbjct: 410 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 469

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + +R V +W+A IG +A  G+G++A+ELF  M+ +GI P+ I    VL AC+H GLV
Sbjct: 470 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 529

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++    F SM ++ G+     HY CM+DLLGRAG L +A++L+ SMP + N  +WG+LL 
Sbjct: 530 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 589

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           A + H++ ++   AAE++  L+PEKSG HVLL+N YAS+G W  VA+VR  MK+  I+K 
Sbjct: 590 ASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKE 649

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           P  S +EV  KVH F  GD+SHP    I S L E+   +  AGY+P++   L D+D  EK
Sbjct: 650 PAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEK 709

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + LLSHHSE+LA+AF L+ST    PIRV KNLR+C DCH   K +S +  REII+RD NR
Sbjct: 710 ELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINR 769

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR G+CSC D+W
Sbjct: 770 FHHFRDGTCSCGDYW 784



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 171/572 (29%), Positives = 265/572 (46%), Gaps = 68/572 (11%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+  ++F  P VL  C   +  G   QVH   +  GF  DVFV N L+  YG  G + D 
Sbjct: 5   GVCCNEFALPVVLK-CVPDAQLG--AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDA 61

Query: 193 RRVFDEM-SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
           RRVFDE  SERN VSW  L+ A  + D   +A+ +F EMV  GI+P      CV++AC  
Sbjct: 62  RRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG 121

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
            +N++ G +V A +  +G + +    NALVDMY+K G VD A  +F +  D ++V  N +
Sbjct: 122 SRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNAL 181

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +S  V  G    A+ +L +M   G  P+   + S + A A  G    GR  HG++++   
Sbjct: 182 ISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 241

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           +  D I   ++DMY K    + A ++FD MS++ ++ WN+LI+G    G           
Sbjct: 242 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGG----------- 290

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                                 +EA  +F  +  E + V+R T+  V  +   L A    
Sbjct: 291 --------------------RHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASAT 330

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           + ++A  EK G   D  +   L+D + +C     A++VF      D+ A T+ I A++  
Sbjct: 331 RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQC 390

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRS--MTDIHGV 605
            +GE A++LF EMLR+G++PD  V   +L AC+      QG     HL +   M+D    
Sbjct: 391 DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG 450

Query: 606 S----------------------PQ--IVHYGCMVDLLGRAGLLGEALDLIKSM---PVE 638
           +                      P+  +V +  M+  L + G    AL+L   M    + 
Sbjct: 451 NALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGIN 510

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           PN +   S+L AC     VD A      + E+
Sbjct: 511 PNHITMTSVLCACNHAGLVDEAKRYFNSMKEM 542


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/795 (35%), Positives = 426/795 (53%), Gaps = 38/795 (4%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H   +  G G      + +V   A  G F  +  A++ FD    +  +      +N L
Sbjct: 121 QVHAMAMATGFGSDVFVANALV---AMYGGFGFMDDARRVFD----EAGSERNAVSWNGL 173

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           +  Y       +AI ++ E+   GI P +F F  V+NACT S     G QVH  +V+MG+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGY 233

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           ++DVF  N L++ Y + G +     +F++M + +VVSW +LI  C        A+ L  +
Sbjct: 234 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M   G+ PN   +  ++ ACA     +LG ++  ++ +    ++  +   LVDMY K   
Sbjct: 294 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A ++F     R+L+L N ++S     G   EA +I   +   G   +R T+ + + +
Sbjct: 354 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           +A L      R  H    + G      + N +ID Y KC     A R+F+  S+      
Sbjct: 414 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS------ 467

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                     GD+               I+  +M+  L+Q +  E A++LF  ML + ++
Sbjct: 468 ----------GDI---------------IAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 502

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +  + +AC  L A +  K ++A++ K     D     ALV  +A+CG  + A   
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 562

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + +R V +W+A IG +A  G+G++A+ELF  M+ +GI P+ I    VL AC+H GLV
Sbjct: 563 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 622

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++    F SM ++ G+     HY CM+DLLGRAG L +A++L+ SMP + N  +WG+LL 
Sbjct: 623 DEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 682

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           A + H++ ++   AAE++  L+PEKSG HVLL+N YAS+G W  VA+VR  MK+  I+K 
Sbjct: 683 ASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKE 742

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           P  S +EV  KVH F  GD+SHP    I S L E+   +  AGY+P++   L D+D  EK
Sbjct: 743 PAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEK 802

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + LLSHHSE+LA+AF L+ST    PIRV KNLR+C DCH   K +S +  REII+RD NR
Sbjct: 803 ELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINR 862

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR G+CSC D+W
Sbjct: 863 FHHFRDGTCSCGDYW 877



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 191/648 (29%), Positives = 293/648 (45%), Gaps = 88/648 (13%)

Query: 52  HCHILKQGL-----GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMY 106
           H ++LK G       H  S+ SK    C           A++ FD        S     +
Sbjct: 27  HANLLKSGFLASLRNHLISFYSKCRRPCC----------ARRVFDEIPDPCHVS-----W 71

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           +SL+  YS  GL   AI  +  +   G+  ++F  P VL  C   +    G QVH   + 
Sbjct: 72  SSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDAQL--GAQVHAMAMA 128

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-SERNVVSWTSLICACARRDLPKEAVY 225
            GF  DVFV N L+  YG  G + D RRVFDE  SERN VSW  L+ A  + D   +A+ 
Sbjct: 129 TGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQ 188

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F EMV  GI+P      CV++AC   +N++ G +V A +  +G + +    NALVDMY+
Sbjct: 189 VFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYV 248

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G VD A  +F +  D ++V  N ++S  V  G    A+ +L +M   G  P+   + S
Sbjct: 249 KMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSS 308

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A A  G    GR  HG++++   +  D I   ++DMY K    + A ++FD MS++ 
Sbjct: 309 ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRD 368

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           ++ WN+LI+G    G                                 +EA  +F  +  
Sbjct: 369 LILWNALISGCSHGG-------------------------------RHDEAFSIFYGLRK 397

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E + V+R T+  V  +   L A    + ++A  EK G   D  +   L+D + +C     
Sbjct: 398 EGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSD 457

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A++VF      D+ A T+ I A++   +GE A++LF EMLR+G++PD  V   +L AC+ 
Sbjct: 458 AIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACAS 517

Query: 586 GGLVNQG----WHLFRS--MTDIHGVS----------------------PQ--IVHYGCM 615
                QG     HL +   M+D    +                      P+  +V +  M
Sbjct: 518 LSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAM 577

Query: 616 VDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIA 660
           +  L + G    AL+L   M    + PN +   S+L AC     VD A
Sbjct: 578 IGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 204/435 (46%), Gaps = 37/435 (8%)

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           + A   G  +H  ++K GF   +   N LI+FY +C      RRVFDE+ +   VSW+SL
Sbjct: 17  AQALLPGAHLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSL 74

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           + A +   LP+ A+  F  M  EG+  N   +  V+     + + +LG +V A     G 
Sbjct: 75  VTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGF 131

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILD 329
            ++  + NALV MY   G +D A+++F E   +RN V  N +MS YV+     +A+ +  
Sbjct: 132 GSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFG 191

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           EM+  G +P        V+A     ++  GR  H  V+R G E      N ++DMY+K G
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMG 251

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           + ++A  IF+ M +  VVSWN+LI+G + N              G DH            
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLN--------------GHDH------------ 285

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
                 A+EL   M S  +  +   +  +  AC   GA DL + I+ ++ K     D  +
Sbjct: 286 -----RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYI 340

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
              LVDM+A+      AM+VF  M  RD+  W A I   +  G  ++A  +F  + ++G+
Sbjct: 341 GVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGL 400

Query: 570 KPDSIVFVGVLTACS 584
             +      VL + +
Sbjct: 401 GVNRTTLAAVLKSTA 415


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/709 (35%), Positives = 405/709 (57%), Gaps = 36/709 (5%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PDKF    + ++  K+       Q++  ++  G     F+   L+N     G++   R++
Sbjct: 74  PDKFYASLIDDSIHKTHL----NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKL 129

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FD+  + +V  W +++   +R      A+ ++  M    + P+  +  CV+ AC+ L  L
Sbjct: 130 FDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPAL 189

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           E+G RV   I   G +++  + N LV +Y KCG +  A  +FG   DR +V   +I+S Y
Sbjct: 190 EMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGY 249

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            + G   EAL I  EM     RPD + ++S + A   + DL  G+  HG V++ GLE   
Sbjct: 250 AQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEF 309

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +  ++  +Y KCG   +A   F+ + N ++                             
Sbjct: 310 DLLISLTSLYAKCGHVMVARLFFNQVENPSL----------------------------- 340

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
             I WN M+ G  +    EEA+ELFR+M S+ I+ D +T+    +AC  +G+L+LA+W+ 
Sbjct: 341 --IFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMD 398

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
            YI  +    D+ + T+L+D +A+CG    A  VF R+  +DV  W+A +    + G G 
Sbjct: 399 EYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGR 458

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +++ LF+ M + G+ P+ + FVG+LTAC + GLV +GW LF  M D +G+ P+  HY C+
Sbjct: 459 ESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACV 517

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLLGRAG L  A + + +MP+EP   +WG+LL+AC+ H++V +  YAAER+  LDP  +
Sbjct: 518 VDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNT 577

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G +V LSN+YAS+  W  VA+VR+ M+E+G+ K  G S IE+NGK+  F +GD++HP   
Sbjct: 578 GHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSK 637

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            I   + ++  RL++AG+VP   +VL D++ +E +  L +HSE+LA+A+GLIST     +
Sbjct: 638 EIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTL 697

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+ KNLR C +CH+  KL+SK+  REI+VRD  RFH F+ G+CSC D+W
Sbjct: 698 RITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/519 (30%), Positives = 258/519 (49%), Gaps = 45/519 (8%)

Query: 46  NELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
             L Q +  +L  GL +    I+K+V   + +G    ++ A+K FD +         +F+
Sbjct: 89  THLNQIYAKLLVTGLQYGGFLIAKLVNKASNIG---EVSCARKLFDKF-----PDPDVFL 140

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+++R YS  G    AI +Y  +    + PD F+FP VL AC+   A   G +VHG I 
Sbjct: 141 WNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIF 200

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + GF+ DVFV+N L+  Y +CG+IV    VF  + +R +VSWTS+I   A+   P EA+ 
Sbjct: 201 RHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALR 260

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F EM +  ++P+ + +V V+ A   +++LE G  +   + ++G++    ++ +L  +Y 
Sbjct: 261 IFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYA 320

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG V  A+  F + ++ +L+  N ++S YV+ G A EA+ +   M     RPD +T+ S
Sbjct: 321 KCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTS 380

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNK 404
           +++A AQ+G L   R    Y+  +     D I NT +ID Y KCG  +MA  +FD + +K
Sbjct: 381 SIAACAQIGSLELARWMDEYISMSEFRN-DVIVNTSLIDTYAKCGSVDMARFVFDRIPDK 439

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VV W++++ G   +G             GR                   E++ LF  M 
Sbjct: 440 DVVVWSAMMVGYGLHGQ------------GR-------------------ESIILFHAMR 468

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              +  + VT VG+ +AC   G ++    ++  +   GI    Q    +VD+  R G   
Sbjct: 469 QAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLD 528

Query: 525 RAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
           RA      M  +  VS W A + A  +  +   GE A E
Sbjct: 529 RAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAE 567


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 273/776 (35%), Positives = 429/776 (55%), Gaps = 39/776 (5%)

Query: 68   SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
            SK+V    + G   S   A++ FD       +   + ++N ++ GY+ +G   E++SL+V
Sbjct: 354  SKLVFMYVKCGDMAS---ARRVFDAM----SSKGNVHVWNLIMGGYAKVGEFEESLSLFV 406

Query: 128  ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            ++   GI PD+     +L   T  S   +G+  HG IVK+GF     V N LI+FY +  
Sbjct: 407  QMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSN 466

Query: 188  DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
             I D   VF+ M  ++ +SW S+I  C+   L  EA+ LF  M  +G + +SVT++ V+ 
Sbjct: 467  MIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLP 526

Query: 248  ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
            ACA+ +    G  V  Y  + G+     + NAL+DMY  C    +  Q+F     +N+V 
Sbjct: 527  ACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVS 586

Query: 308  CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
               ++++Y+R GL  +   +L EM+L G RPD   + SA+ A A    L  G+  HGY +
Sbjct: 587  WTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTI 646

Query: 368  RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            RNG+E    + N +++MY+KC                                +VE AR 
Sbjct: 647  RNGMEKLLPVANALMEMYVKCR-------------------------------NVEEARL 675

Query: 428  VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
            +F  +  +D ISWNT++GG ++ N   E+  LF  ML +  + + VTM  +  A   + +
Sbjct: 676  IFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISS 734

Query: 488  LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            L+  + I+AY  + G   D   + ALVDM+ +CG    A  +F R+ K+++ +WT  I  
Sbjct: 735  LERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAG 794

Query: 548  MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
              M G G+ A+ LF +M   GI+PD+  F  +L AC H GL  +G   F++M   + + P
Sbjct: 795  YGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEP 854

Query: 608  QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
            ++ HY C+VDLL R G L EAL+ I+SMP+EP+  IW SLL  C+ H+NV +A   A+++
Sbjct: 855  KLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKV 914

Query: 668  TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
             +L+PE +G +VLL+NIYA A +W  V +++ ++  +G+R+  G S IEV  KVH F + 
Sbjct: 915  FKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIAD 974

Query: 728  DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
            + +HP+ N I+  L ++  R+R  G+ P     L+  D+      L  HS KLA+AFG++
Sbjct: 975  NRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVL 1034

Query: 788  STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
            +  +  PIRV KN ++C  CH  AK +SK+ +REII+RD++RFH F  G CSC  +
Sbjct: 1035 NLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 238/504 (47%), Gaps = 42/504 (8%)

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           +A + ++ SL+  Y+  G   EA+SL+ ++   G+ PD      VL   +   +  EG  
Sbjct: 166 AADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEV 225

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +HG + K+G  +   V N LI  Y  CG + D  RVFD M  R+ +SW S+I  C     
Sbjct: 226 IHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGW 285

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK-------- 271
              AV LF +M  +G + +SVT++ V+ ACA L    +G  V  Y  + G+         
Sbjct: 286 HGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQS 345

Query: 272 --ANALMVNALVDMYMKCGAVDTAKQLFGECKDR-NLVLCNTIMSNYVRLGLAREALAIL 328
              +A + + LV MY+KCG + +A+++F     + N+ + N IM  Y ++G   E+L++ 
Sbjct: 346 GIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLF 405

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +M   G  PD   +   +     L     G + HGY+++ G     ++CN +I  Y K 
Sbjct: 406 VQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKS 465

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
                A  +F+ M  +  +SWNS+I+G   NG                            
Sbjct: 466 NMIGDAVLVFNRMPRQDTISWNSVISGCSSNG---------------------------- 497

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
              +  EA+ELF  M ++  ++D VT++ V  AC         + ++ Y  K G+  +  
Sbjct: 498 ---LNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETS 554

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           LA AL+DM++ C D Q   Q+FR M +++V +WTA I +    G  ++   L  EM+  G
Sbjct: 555 LANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDG 614

Query: 569 IKPDSIVFVGVLTACSHGGLVNQG 592
           I+PD       L A +    + QG
Sbjct: 615 IRPDVFAVTSALHAFAGDESLKQG 638



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 239/528 (45%), Gaps = 55/528 (10%)

Query: 179 LINFYGECGDIVDGRRVFDEMSER--NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           L+  Y +CGD+ + R VFD M  +  +V  WTSL+ A A+    +EAV LF +M   G+ 
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P++  + CV+   + L +L  G+ +   +++LG+     + NAL+ +Y +CG ++ A ++
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F     R+ +  N+++      G    A+ +  +M   G     VT+LS + A A LG  
Sbjct: 262 FDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYG 321

Query: 357 LCGRMCHGYVLRNGL-EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L G+  HGY +++GL  G DS+ + + D  +                       + L+  
Sbjct: 322 LIGKAVHGYSVKSGLLWGLDSVQSGIDDAALG----------------------SKLVFM 359

Query: 416 LIKNGDVESAREVFSEMPGRDHIS-WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
            +K GD+ SAR VF  M  + ++  WN ++GG  +   FEE++ LF  M    I  D   
Sbjct: 360 YVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHA 419

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +  +      L         + YI K G      +  AL+  +A+      A+ VF RM 
Sbjct: 420 ISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMP 479

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           ++D  +W + I   +  G   +A+ELF  M  QG + DS+  + VL AC+     ++ W 
Sbjct: 480 RQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQ----SRYWF 535

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL-------------IKSMPVEPND 641
             R    +HG       Y     L+G   L    LD+              +SM  + N 
Sbjct: 536 AGRV---VHG-------YSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMG-QKNV 584

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           V W +++ +  +    D  A   + +  LD  +  V  + S ++A AG
Sbjct: 585 VSWTAMITSYMRAGLFDKVAGLLQEMV-LDGIRPDVFAVTSALHAFAG 631



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 191/432 (44%), Gaps = 60/432 (13%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKAN----ALMVNALVDMYMKCGAVDTAKQLFGEC 300
           V+  C + ++LE   R  A I      A     +++   LV  Y+KCG +  A+ +F   
Sbjct: 103 VVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGM 162

Query: 301 KDR--NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
             +  ++ +  ++MS Y + G  +EA+++  +M   G  PD   +   +   + LG L  
Sbjct: 163 PPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTE 222

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G + HG + + GL    ++ N +I +Y +CG+                            
Sbjct: 223 GEVIHGLLEKLGLGQACAVANALIAVYSRCGR---------------------------- 254

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
              +E A  VF  M  RD ISWN+M+GG         A++LF  M S+  ++  VT++ V
Sbjct: 255 ---MEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSV 311

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHC----------DMQLATALVDMFARCGDPQRAMQ 528
             AC  LG   + K ++ Y  K+G+            D  L + LV M+ +CGD   A +
Sbjct: 312 LPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARR 371

Query: 529 VFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT-----A 582
           VF  M  K +V  W   +G  A  G  E+++ LF +M   GI PD      +L      +
Sbjct: 372 VFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLS 431

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           C+  GLV  G+ +        G   Q      ++    ++ ++G+A+ +   MP + + +
Sbjct: 432 CARDGLVAHGYIVKL------GFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQ-DTI 484

Query: 643 IWGSLLAACQKH 654
            W S+++ C  +
Sbjct: 485 SWNSVISGCSSN 496



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 139/299 (46%), Gaps = 31/299 (10%)

Query: 412 LIAGLIKNGDVESAREVFSEMPGR--DHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           L+   +K GD+  AR VF  MP +  D   W +++    +   F+EA+ LFR M    + 
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +  V      LG+L   + I+  +EK G+     +A AL+ +++RCG  + A +V
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M  RD  +W + IG     G    AV+LF++M  QG +  S+  + VL AC+  GL 
Sbjct: 262 FDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACA--GL- 318

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
             G+ L      +HG S              ++GLL   LD ++S     +D   GS L 
Sbjct: 319 --GYGLIGKA--VHGYSV-------------KSGLL-WGLDSVQS---GIDDAALGSKLV 357

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHV--LLSNIYASAGKWTNVARVRLQMKEQGI 706
                   D+A  +A R+ +    K  VHV  L+   YA  G++     + +QM E GI
Sbjct: 358 FMYVKCG-DMA--SARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGI 413


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 276/806 (34%), Positives = 432/806 (53%), Gaps = 41/806 (5%)

Query: 40  KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           ++ K L  +K  H  I+   L       +K+V   + + + E+  Y    FD + +    
Sbjct: 40  ESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYV---FDQFFQPKG- 95

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
                + N+++ GY   G   E + L+  +    +  D  +  F L AC  S  +  G++
Sbjct: 96  ----LLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGME 151

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +  + V+ G +++ FV + +I+F  + G I + +RVFD M  ++VV W S+I    +   
Sbjct: 152 IISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGC 211

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
              A  LFFEM   GIKP+ +TM  +I AC  + NL+LG  +  Y+  LG+  + L++ +
Sbjct: 212 FDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTS 271

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
            VDMY K G +++A+ +F +   RNLV  N ++S  VR GL  E+  +   ++      D
Sbjct: 272 FVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFD 331

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T++S +   +Q   L  G++ HG  +R+  E    +   ++D+Y KCG          
Sbjct: 332 LTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCG---------- 380

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                 ++ A  VF+ M  R+ I+W  ML GL Q    E+A+ L
Sbjct: 381 ---------------------SLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRL 419

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M  E I  + VT V +  +C +LG+L   + I+ ++ + G   D+   TALVDM+A+
Sbjct: 420 FAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAK 479

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           CG    A ++F      +DV  W + I    M G+G QAV ++++M+ +G+KP+   F+ 
Sbjct: 480 CGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLS 539

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L+ACSH  LV QG  LF SM   H + P   HY C+VDLL RAG   EA  LI+ MP +
Sbjct: 540 LLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQ 599

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P   +  +LL+ C+ H+N+++    ++++  LD    G++++LSNIYA A +W  V  +R
Sbjct: 600 PGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIR 659

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
             M+ +G++K PG S +E    VH F +GD SHP    I   L  +   +  +GYVPD +
Sbjct: 660 GLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTS 719

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            VL DVDE+ K  +L  HSE+LA+AFGL++T     IR+ KNLR+C DCH+  K +SK+ 
Sbjct: 720 CVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIV 779

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            REIIVRD NRFH F  G CSC D+W
Sbjct: 780 KREIIVRDANRFHHFSNGECSCGDYW 805


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 265/761 (34%), Positives = 425/761 (55%), Gaps = 37/761 (4%)

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
           YA K F   + D+++  T+  +N  +  Y   G G EA+  + ++    +  D  T+  +
Sbjct: 249 YATKLF---VCDDDSDVTV--WNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVI 303

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L+     +    G Q+HGA+V+ G+D+ V V N  IN Y + G +   RR+F +M E ++
Sbjct: 304 LSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDL 363

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE-LGDRVCA 263
           +SW ++I  CAR  L + ++ LF +++  G+ P+  T+  V+ AC+ L+    +G +V  
Sbjct: 364 ISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHT 423

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              + G+  ++ +  AL+D+Y K G ++ A+ LF      +L   N +M  +      RE
Sbjct: 424 CALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYRE 483

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +   M   G + D++T  +A  A+  L  L  G+  H  V++        + + ++D
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILD 543

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY+KCG                               +++SAR+VF+++P  D ++W T+
Sbjct: 544 MYLKCG-------------------------------EMKSARKVFNQIPSPDDVAWTTV 572

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G  +    E+A+  +  M    ++ D  T   +  AC  L AL+  K I+A I K   
Sbjct: 573 ISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNC 632

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D  + T+LVDM+A+CG+ + A  +FRRM  R V+ W A I  +A  GN E+A+  FNE
Sbjct: 633 AFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNE 692

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M  +G+ PD + F+GVL+ACSH GL +  +  F SM   +GV P+I HY C+VD L RAG
Sbjct: 693 MKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAG 752

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            + EA  ++ SMP E +  ++ +LL AC+   + +     AE++  +DP  S  +VLLSN
Sbjct: 753 HIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSN 812

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           IYA+A +W N    R  MK   ++K PG S I++  KVH F +GD SH E + I + +  
Sbjct: 813 IYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEY 872

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           +  R+++ GYVPD    L+D++E++K+  LS+HSEKLA+A+GL+ T  +  +RV+KNLR+
Sbjct: 873 VMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRV 932

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH+  K +S V+ REI++RD NRFH FR G CSC D+W
Sbjct: 933 CGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 256/562 (45%), Gaps = 71/562 (12%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG-EGVQVHGA 163
           ++N +++ Y  +G G E + L+      G+ PD  +   +L    K + F  E  QV   
Sbjct: 190 LWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAY 249

Query: 164 IVKMGF---DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
             K+     D DV V N  ++ Y + G+                  W             
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGE-----------------GW------------- 279

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
            EAV  F +M++  +  +S+T + ++S  A L +LELG ++   +   G      + N+ 
Sbjct: 280 -EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSA 338

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           ++MY+K G+V+ A+++FG+ K+ +L+  NT++S   R GL   +L +  ++L  G  PD+
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398

Query: 341 VTMLSAVSASAQLGDLLC-GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            T+ S + A + L +  C GR  H   L+ G+     +   +ID+Y K GK         
Sbjct: 399 FTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGK--------- 449

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                 +E A  +F    G D  SWN M+ G T  + + EA+ L
Sbjct: 450 ----------------------MEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRL 487

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F +M     K D++T    A A G L  L   K I+A + K   H D+ + + ++DM+ +
Sbjct: 488 FSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLK 547

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG+ + A +VF ++   D  AWT  I      G  EQA+  +++M   G++PD   F  +
Sbjct: 548 CGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATL 607

Query: 580 LTACSHGGLVNQGWHLFRSMTDIH-GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           + ACS    + QG  +  ++  ++    P ++    +VD+  + G + +A  L + M   
Sbjct: 608 VKACSLLTALEQGKQIHANIMKLNCAFDPFVM--TSLVDMYAKCGNIEDAYGLFRRMNTR 665

Query: 639 PNDVIWGSLLAACQKHQNVDIA 660
            +  +W +++    +H N + A
Sbjct: 666 -SVALWNAMIVGLAQHGNAEEA 686



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 250/540 (46%), Gaps = 46/540 (8%)

Query: 44  TLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           +LN L   KQ H  +++ G     S  +  +    + G   S+ YA++ F          
Sbjct: 309 SLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAG---SVNYARRMFG-----QMKE 360

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK-SSAFGEGVQ 159
             L  +N++I G +  GL   ++ L+++L   G+LPD+FT   VL AC+    ++  G Q
Sbjct: 361 VDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQ 420

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           VH   +K G   D FV   LI+ Y + G + +   +F      ++ SW +++      D 
Sbjct: 421 VHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDN 480

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            +EA+ LF  M E G K + +T      A   L  L+ G ++ A + ++    +  +++ 
Sbjct: 481 YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISG 540

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           ++DMY+KCG + +A+++F +    + V   T++S  V  G   +AL    +M L G +PD
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T  + V A + L  L  G+  H  +++        +  +++DMY KCG  E A  +F 
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR 660

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M+ ++V  WN++I GL ++G+ E A   F+EM  R          G+T           
Sbjct: 661 RMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSR----------GVTP---------- 700

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFA 518
                      DRVT +GV SAC + G    A   +  ++K  G+  +++  + LVD  +
Sbjct: 701 -----------DRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALS 749

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           R G  Q A +V   M  +   + +   + A  ++G+ E   E   E L      DS  +V
Sbjct: 750 RAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETG-ERVAEKLFTMDPSDSAAYV 808



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 152/642 (23%), Positives = 271/642 (42%), Gaps = 89/642 (13%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K+ H  I+  GL       + ++   A+ G   SL  A+K FD      ++   L  YN+
Sbjct: 33  KRTHAVIVTSGLNPDRYVTNNLITMYAKCG---SLFSARKLFDI---TPQSDRDLVTYNA 86

Query: 109 LIRGYSCIG------LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           ++  Y+  G         EA  ++  L    +L  + T   +   C    +      + G
Sbjct: 87  ILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQG 146

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             VK+G   DVFV   L+N Y +   I + R +FD M  R+VV W  ++ A        E
Sbjct: 147 YAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDE 206

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG-DRVCAYIDELGMKANALMVNALV 281
            + LF      G++P+ V++  ++    K    E   ++V AY                 
Sbjct: 207 VLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAY----------------- 249

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
                      A +LF    D ++ + N  +S+Y++ G   EA+    +M+      D +
Sbjct: 250 -----------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSL 298

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T +  +S  A L  L  G+  HG V+R G + + S+ N+ I+MY+K G    A R+F  M
Sbjct: 299 TYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQM 358

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
               ++SWN++I+G  ++G                               + E ++ LF 
Sbjct: 359 KEVDLISWNTVISGCARSG-------------------------------LEECSLRLFI 387

Query: 462 VMLSERIKVDRVTMVGVASACGYL-GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
            +L   +  D+ T+  V  AC  L  +  + + ++    K GI  D  ++TAL+D++++ 
Sbjct: 388 DLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKG 447

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           G  + A  +F   +  D+++W A +    +  N  +A+ LF+ M  +G K D I F    
Sbjct: 448 GKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAA 507

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQI-VHYGCMV-----DLLGRAGLLGEALDLIKS 634
            A      + QG         IH V  ++  HY   V     D+  + G +  A  +   
Sbjct: 508 KAAGCLVRLQQG-------KQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQ 560

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIA--AYAAERITELDPEK 674
           +P  P+DV W ++++ C ++   + A   Y   R+  + P++
Sbjct: 561 IP-SPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDE 601


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 288/842 (34%), Positives = 455/842 (54%), Gaps = 43/842 (5%)

Query: 6   NPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSL--KNCKTLNELKQPHCHILKQGLGHK 63
           N  P+  A P+ +T  + H A    +      SL  +   TL  +K  H  I+K  +  +
Sbjct: 20  NCRPIYNAAPS-STFVSVHHAPFFNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTE 78

Query: 64  PSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAI 123
               +K++   + +G    L +A+  FD      ET+      N++I G+      +E  
Sbjct: 79  SFLAAKLIRVYSDLGF---LGHARNVFDQ-CSLPETAVC----NAMIAGFLRNQQHMEVP 130

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
            L+  +    I  + +T  F L ACT       G+++  A V+ GF   ++V + ++NF 
Sbjct: 131 RLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFL 190

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            + G + D ++VFD M E++VV W S+I    ++ L  E++ +F EM+  G++P+ VTM 
Sbjct: 191 VKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMA 250

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
            ++ AC +    ++G    +Y+  LGM  +  ++ +LVDMY   G   +A  +F     R
Sbjct: 251 NLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSR 310

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           +L+  N ++S YV+ G+  E+ A+   ++  G   D  T++S +   +Q  DL  GR+ H
Sbjct: 311 SLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILH 370

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
             ++R  LE    +   ++DMY KCG  + A  +F  M  K V                 
Sbjct: 371 SCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNV----------------- 413

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
                         I+W  ML GL+Q    E+A++LF  M  E++  + VT+V +   C 
Sbjct: 414 --------------ITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCA 459

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR-RMEKRDVSAWT 542
           +LG+L   + ++A+  ++G   D  + +AL+DM+A+CG    A ++F      +DV    
Sbjct: 460 HLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCN 519

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + I    M G+G  A+ +++ M+ + +KP+   FV +LTACSH GLV +G  LF SM   
Sbjct: 520 SMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERD 579

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           H V PQ  HY C+VDL  RAG L EA +L+K MP +P+  +  +LL+ C+ H+N ++   
Sbjct: 580 HDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQ 639

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
            A+R+  LD   SG++V+LSNIYA A KW +V  +R  M+ QG++K+PG S IEV  KV+
Sbjct: 640 IADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVY 699

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F + D+SHP   +I  +L  +   +   GY+PD + VL DV+E  K  LL  HSE+LA+
Sbjct: 700 TFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAI 759

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGL+ST     I++ KNLR+C DCH+  K +SK+  REIIVRD NRFH F  G CSC+D
Sbjct: 760 AFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCND 819

Query: 843 FW 844
           FW
Sbjct: 820 FW 821


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 279/740 (37%), Positives = 407/740 (55%), Gaps = 34/740 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           LF +N L+ GY+  G   EA+ LY  +   GI PD +TFP VL +C  +     G +VH 
Sbjct: 100 LFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHA 159

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +V+  FD DV V N LI  Y +CGD+V  R +FD+M  R+ +SW ++I      D   E
Sbjct: 160 HVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLE 219

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + LFF M E  I P+ +TM  VISAC  L +  LG ++ +Y+       N  + N+L+ 
Sbjct: 220 GLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQ 279

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY+  G    A+ +F   + R++V   TI+S  V   L  +AL     M + G  PD VT
Sbjct: 280 MYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVT 339

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + S +SA A LG L  G   H    R G   +  + N++IDMY KC +            
Sbjct: 340 IASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKR------------ 387

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                              +E A E+F ++P +D ISW +++ GL   N   EA+  FR 
Sbjct: 388 -------------------IEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           M+ +  K + VT++   SAC  +GAL   K I+A+  K G+  D  L  A++D++ RCG 
Sbjct: 429 MILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGR 487

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            + A+  F   EK DV AW   +   A +G G   +ELF  M+   I PD + F+ +L A
Sbjct: 488 MRTALNQFNLNEK-DVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCA 546

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS  G+V +G   F+ M   + ++P + HY C+VDLLGRAG L EA + I+ MP++P+  
Sbjct: 547 CSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPA 606

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           IWG+LL AC+ H++V +   AA+ I + D E  G ++LL N+YA +GKW  VA+VR  MK
Sbjct: 607 IWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMK 666

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
           E+G+   PG S +EV GKVH F SGD  HP+M  I+ +L     +++ +G+     +  +
Sbjct: 667 EEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSS-M 725

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           D  +  K  +   HSE+ A+A+ LI+++  MPI V KNL +C  CHS  K +SK+  REI
Sbjct: 726 DGIQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREI 785

Query: 823 IVRDNNRFHFFRQGSCSCSD 842
            VRD  +FH F+ G CSC D
Sbjct: 786 SVRDTEQFHHFKDGLCSCGD 805



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 207/467 (44%), Gaps = 61/467 (13%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIG-------------------------------LGVE 121
           Y+        + +YNSLI+ Y  +G                               L  +
Sbjct: 261 YVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDK 320

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A+  Y  +   G +PD+ T   VL+AC        G+++H    + G    V V N LI+
Sbjct: 321 ALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLID 380

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            Y +C  I     +F ++ +++V+SWTS+I      +   EA+  F +M+ +  KPNSVT
Sbjct: 381 MYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVT 439

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           ++  +SACA++  L  G  + A+  + GM  +  + NA++D+Y++CG + TA   F    
Sbjct: 440 LISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLN 498

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-- 359
           ++++   N +++ Y + G     + +   M+     PD VT +S + A ++ G +  G  
Sbjct: 499 EKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLE 558

Query: 360 ---RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAG 415
              RM   Y +   L+ +  +    +D+  + GK   A    + M  K   + W +L+  
Sbjct: 559 YFQRMKVNYHITPNLKHYACV----VDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNA 614

Query: 416 LIKNGDV----ESAREVFSEMPGRDHISWNTMLGGLTQEN-MFEEAMELFRVMLSERIKV 470
              +  V     +A+ +F +    + I +  +L  L  ++  ++E  ++ R M  E + V
Sbjct: 615 CRIHRHVLLGELAAQHIFKQ--DAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIV 672

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           D          C +   +++   ++A++  +  H  MQ    +++ F
Sbjct: 673 D--------PGCSW---VEVKGKVHAFLSGDNFHPQMQEINVVLEGF 708



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 10/278 (3%)

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N+L++  ++ GDV +A  VF  M  RD  SWN ++GG T+   F+EA+ L+  +L   I+
Sbjct: 73  NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132

Query: 470 VDRVTMVGVASACGYLGALDLAKW--IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
            D  T   V  +C   GA+DL +   ++A++ +     D+ +  AL+ M+ +CGD   A 
Sbjct: 133 PDVYTFPSVLRSCA--GAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            +F +M  RD  +W A I          + +ELF  M    I PD +    V++AC   G
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGS 646
               G  L  S          I  Y  ++ +    G   EA  +   M  E  DV+ W +
Sbjct: 251 DERLGTQL-HSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM--ECRDVVSWTT 307

Query: 647 LLAACQKHQNVDIA--AYAAERITELDPEKSGVHVLLS 682
           +++ C  +   D A   Y    IT   P++  +  +LS
Sbjct: 308 IISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLS 345



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 1/145 (0%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N+ L  L      E+A++    M   +I V+    V +   C         ++++  +  
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61

Query: 501 NGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           + +    ++L  AL+ MF R GD   A  VF RM +RD+ +W   +G     G  ++A+ 
Sbjct: 62  SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACS 584
           L++ +L  GI+PD   F  VL +C+
Sbjct: 122 LYHRILWAGIRPDVYTFPSVLRSCA 146



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 20/196 (10%)

Query: 27  KTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHK---PSYISKVVCTCAQMGTF 80
           K+ P     I +L  C  +  L   K+ H H LK G+G     P+ I  +   C +M T 
Sbjct: 432 KSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRT- 490

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
                A   F+   KD      +  +N L+ GY+  G G   + L+  +    I PD  T
Sbjct: 491 -----ALNQFNLNEKD------VGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVT 539

Query: 141 FPFVLNACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           F  +L AC++S    EG++    + V      ++    C+++  G  G + +     + M
Sbjct: 540 FISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERM 599

Query: 200 SER-NVVSWTSLICAC 214
             + +   W +L+ AC
Sbjct: 600 PIKPDPAIWGALLNAC 615


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/748 (35%), Positives = 427/748 (57%), Gaps = 37/748 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +++LI  Y+      EAIS + ++   G  P+++ F  V  AC+       G  + G
Sbjct: 7   LVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFG 66

Query: 163 AIVKMG-FDRDVFVENCLIN-FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
            ++K G F+ DV V   LI+ F    GD+    +VFD M +RNVV+WT +I    +    
Sbjct: 67  FLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFS 126

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           ++AV LF +MV  G  P+  T+  V+SACA++  L LG +    + + G+  +  +  +L
Sbjct: 127 RDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSL 186

Query: 281 VDMYMKC---GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG-LAREALAILDEMLLHGP 336
           VDMY KC   G+VD A+++F      N++    I++ YV+ G   REA+ +  EM+    
Sbjct: 187 VDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQV 246

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           +P+  T  S + A A L D+  G   +  V++  L   + + N++I MY +CG       
Sbjct: 247 KPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCG------- 299

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                   ++E+AR+ F  +  ++ +S+NT++    +    EEA
Sbjct: 300 ------------------------NMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEA 335

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
            ELF  +      V+  T   + S    +GA+   + I++ I K+G   ++ +  AL+ M
Sbjct: 336 FELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISM 395

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           ++RCG+ + A QVF  M   +V +WT+ I   A  G   +A+E F++ML  G+ P+ + +
Sbjct: 396 YSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTY 455

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           + VL+ACSH GL+++G   F+SM   HG+ P++ HY C+VDLLGR+G L EA++L+ SMP
Sbjct: 456 IAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMP 515

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
            + + ++  + L AC+ H N+D+  +AAE I E DP     ++LLSN++ASAG+W  VA 
Sbjct: 516 FKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAE 575

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R +MKE+ + K  G S IEV  KVH+F  GD SHP+   I   L ++  ++++ GY+P 
Sbjct: 576 IRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPS 635

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
              VL DV+E++K+  L  HSEK+A+A+G ISTS + PIRV KNLR+C DCH+  K  S 
Sbjct: 636 TDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSI 695

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           V  +EI++RD NRFH F+ G+CSC+D+W
Sbjct: 696 VRRKEIVLRDANRFHHFKDGTCSCNDYW 723



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 152/515 (29%), Positives = 249/515 (48%), Gaps = 50/515 (9%)

Query: 63  KPSYISKVVCT-CAQMGTF----ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
           K  Y    VC  CA +  F      L  A K FD     N  + TL     +I  +  +G
Sbjct: 70  KTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTL-----MITRFQQLG 124

Query: 118 LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
              +A+ L++++   G +PD+FT   V++AC +      G Q H  ++K G D DV V  
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184

Query: 178 CLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARR-DLPKEAVYLFFEMVEE 233
            L++ Y +C   G + D R+VFD M   NV+SWT++I    +     +EA+ LF EMV+ 
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
            +KPN  T   V+ ACA L ++ LG++V A + ++ + +   + N+L+ MY +CG ++ A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           ++ F    ++NLV  NTI++ Y +   + EA  + +E+   G   +  T  S +S ++ +
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
           G +  G   H  +L++G +    ICN +I MY +CG  E A ++F+ M +  V+SW S+I
Sbjct: 365 GAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMI 424

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            G  K+G                                   A+E F  ML   +  + V
Sbjct: 425 TGFAKHG-------------------------------FATRALETFHKMLEAGVSPNEV 453

Query: 474 TMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           T + V SAC ++G +    K   +   ++GI   M+    +VD+  R G  + AM++   
Sbjct: 454 TYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNS 513

Query: 533 ME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNE 563
           M  K D       +GA  + GN   G+ A E+  E
Sbjct: 514 MPFKADALVLRTFLGACRVHGNMDLGKHAAEMILE 548



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 230/460 (50%), Gaps = 37/460 (8%)

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           ++R++VSW++LI   A  +   EA+  FF+M+E G  PN      V  AC+  +N+ LG 
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 260 RVCAYIDELGMKANALMVN-ALVDMYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
            +  ++ + G   + + V  AL+DM++K  G +++A ++F    DRN+V    +++ + +
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           LG +R+A+ +  +M+L G  PDR T+   VSA A++G L  GR  H  V+++GL+    +
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182

Query: 378 CNTMIDMYMKC---GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             +++DMY KC   G  + A ++FD M    V+SW ++I G +++G  +           
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCD----------- 231

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
                               EA+ELF  M+  ++K +  T   V  AC  L  + L + +
Sbjct: 232 -------------------REAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQV 272

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           YA + K  +     +  +L+ M++RCG+ + A + F  + ++++ ++   + A A   N 
Sbjct: 273 YALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNS 332

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           E+A ELFNE+   G   ++  F  +L+  S  G + +G  +   +    G    +     
Sbjct: 333 EEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILK-SGFKSNLHICNA 391

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           ++ +  R G +  A  +   M  + N + W S++    KH
Sbjct: 392 LISMYSRCGNIEAAFQVFNEMG-DGNVISWTSMITGFAKH 430


>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/575 (43%), Positives = 351/575 (61%), Gaps = 20/575 (3%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLG---LAREALAILDEMLLHGP-RPDRVTMLS 345
           +D A+ +F +  + N    NTI+          L  EAL +   ML  G  +P+R T  S
Sbjct: 68  IDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF------- 398
            + A A+   L  G+  HG +++ G    + + + ++ MY+ C   E A  +F       
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187

Query: 399 ---------DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
                        +  VV WN +I G ++ GD++SA+ +F EMP R  +SWN M+ G  Q
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQ 247

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
              F EA+ LF+ M S  I  + VT+V V  A   +GAL+L KWI+ Y  KN +  D  L
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVL 307

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
            +ALVDM+++CG   +A+QVF  + KR+   W+A IGA AM G  E A+  F+ M + G+
Sbjct: 308 GSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
            P+ + ++G+L+ACSH GLV +G   F  M  + G+ P+I HYGCMVDLLGRAG L EA 
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           +LI++MP+EP+DVIW +LL AC+ H+N+ +    AE + EL P  SG +V LSN+YAS G
Sbjct: 428 ELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLG 487

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
            W  VARVRL+MK   IRK PG S IE++G +HEF   D+SH +   I +ML EM+ +LR
Sbjct: 488 NWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLR 547

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
             GY P+   V L+ DEQE+   L +HSEK+A+AFGLIST+   P+++VKNLR+C DCH+
Sbjct: 548 SNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHA 607

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             KL+S +Y R+IIVRD  RFH F  GSCSC D+W
Sbjct: 608 SLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 204/453 (45%), Gaps = 62/453 (13%)

Query: 18  TTLTNQHKAKTTPKDSPSIGS--LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCA 75
           +T+ N ++        P I S    +CKT  +LKQ H   +K G    P   ++V+  CA
Sbjct: 3   STIYNPNRTLNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCA 62

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG---LGVEAISLYVELAGF 132
              +   + YA+  F    + N      F +N+++R  +      L  EA+ L+  +   
Sbjct: 63  --FSSRDIDYARAVFRQMPEPN-----CFCWNTILRILAETNDEHLQSEALMLFSAMLCD 115

Query: 133 G-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY-------- 183
           G + P++FTFP VL AC ++S   EG Q+HG IVK GF  D FV + L+  Y        
Sbjct: 116 GRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMED 175

Query: 184 -------------GEC--------------------------GDIVDGRRVFDEMSERNV 204
                        G C                          GDI   + +FDEM  R+V
Sbjct: 176 AYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSV 235

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           VSW  +I   A+     EA+ LF EM    I PN VT+V V+ A A++  LELG  +  Y
Sbjct: 236 VSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLY 295

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
             +  ++ + ++ +ALVDMY KCG++D A Q+F     RN +  + I+  +   G A +A
Sbjct: 296 AGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDA 355

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMID 383
           +     M   G  P+ V  +  +SA +  G +  GR    ++++  GL+        M+D
Sbjct: 356 IIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVD 415

Query: 384 MYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
           +  + G  E A  +  +M      V W +L+  
Sbjct: 416 LLGRAGHLEEAEELIRNMPIEPDDVIWKALLGA 448



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 200/467 (42%), Gaps = 96/467 (20%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYG-ECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           Q+H   +K G  +D      +I F      DI   R VF +M E N   W +++   A  
Sbjct: 37  QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAET 96

Query: 218 D---LPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           +   L  EA+ LF  M+ +G +KPN  T   V+ ACA+   L  G ++   I + G   +
Sbjct: 97  NDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHED 156

Query: 274 ALMVNALVDMYMKCGAVDTAKQLF--------GECK--------DRNLVLCNTIMSNYVR 317
             +++ LV MY+ C  ++ A  LF        G C+        D N+VL N ++   VR
Sbjct: 157 EFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVR 216

Query: 318 LGLAREALAILDEMLLHGPR----------------------------------PDRVTM 343
           LG  + A  + DEM    PR                                  P+ VT+
Sbjct: 217 LGDIKSAKNLFDEM---PPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTL 273

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S + A A++G L  G+  H Y  +N +E  D + + ++DMY KCG  + A ++F+ +  
Sbjct: 274 VSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPK 333

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           +  ++W+++I     +G                                 E+A+  F +M
Sbjct: 334 RNAITWSAIIGAFAMHGRA-------------------------------EDAIIHFHLM 362

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGD 522
               +  + V  +G+ SAC + G ++  +  ++++ K  G+   ++    +VD+  R G 
Sbjct: 363 GKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGH 422

Query: 523 PQRAMQVFRRM--EKRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
            + A ++ R M  E  DV  W A +GA  M  N   GE+  E   E+
Sbjct: 423 LEEAEELIRNMPIEPDDV-IWKALLGACKMHKNLKMGERVAETLMEL 468


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/745 (35%), Positives = 414/745 (55%), Gaps = 14/745 (1%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +  +I GY  I    +A  ++ ++   G+LPD+  F   L+A            +  
Sbjct: 189 LVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV 248

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVD-GRRVFDEMSERNVVSWTSLICACARRDLPK 221
             +K GF+RDV +   ++N Y     ++D   + F+ M ERN  +W+++I A +      
Sbjct: 249 LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRID 308

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            A+ ++     + I   +  ++  ++ C ++ +  +       + E   +   +  NAL+
Sbjct: 309 AAIAVYERDPVKSIACRT-ALITGLAQCGRIDDARI-------LFEQIPEPIVVSWNALI 360

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
             YM+ G V+ AK+LF +   RN +    +++ Y + G + EAL +L E+   G  P   
Sbjct: 361 TGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLS 420

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           ++ S   A + +  L  G   H   ++ G +     CN +I MY KC   E A ++F  M
Sbjct: 421 SLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             K +VSWNS +A L++N  ++ AR  F  M  RD +SW T++          EAM  F+
Sbjct: 481 VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK 540

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M  E    +   +  +   CG LGA  + + I+    K G+  ++ +A AL+ M+ +CG
Sbjct: 541 TMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG 600

Query: 522 --DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
             D +R   +F  ME+RD+  W   I   A  G G +A++++  M   G+ P+ + FVG+
Sbjct: 601 CADSRR---IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGL 657

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L ACSH GLV++GW  F+SM+  +G++P   HY CMVDLLGR G +  A   I  MP+EP
Sbjct: 658 LNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEP 717

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
           + VIW +LL AC+ H+N +I   AAE++  ++P  +G +V+LSNIY+S G W  VA VR 
Sbjct: 718 DTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRK 777

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            MK+QG+ K PG S  ++  K+H F +GD+ H ++  I + L E+   L+  GYVPD   
Sbjct: 778 IMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEF 837

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           VL D+DE++K+  L +HSEKLA+A+ L++T K MPI+++KNLR+C DCH+F K VS V  
Sbjct: 838 VLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTK 897

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           R+I +RD NRFH FR GSCSC DFW
Sbjct: 898 RQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 136/584 (23%), Positives = 251/584 (42%), Gaps = 92/584 (15%)

Query: 77  MGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP 136
           +G    +  A++ FD   + +     +  +NS+I  Y   G+   A  LY  ++G     
Sbjct: 44  LGRLGRVGEAREVFDAMPRRD-----IIAWNSMISAYCHNGMPDAARDLYDAISG----G 94

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           +  T   +L+   +     E  +V   ++    +R+    N +I+ Y + GDI   RR+F
Sbjct: 95  NMRTGAILLSGYGRLGRVLEARRVFDGML----ERNTVAWNAMISCYVQNGDITMARRLF 150

Query: 197 D-------------------------------EMSERNVVSWTSLICACARRDLPKEAVY 225
           D                               +M ERN+VSWT +I    R +   +A  
Sbjct: 151 DAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWD 210

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F +M  EG+ P+       +SA   L NL++ + +     + G + + ++  A++++Y 
Sbjct: 211 IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270

Query: 286 KCGAV-DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           +  +V DTA + F    +RN    +T+++                  L HG R D     
Sbjct: 271 RDTSVLDTAIKFFESMIERNEYTWSTMIA-----------------ALSHGGRIDAAI-- 311

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            AV     +  + C                      +I    +CG+ + A  +F+ +   
Sbjct: 312 -AVYERDPVKSIACR-------------------TALITGLAQCGRIDDARILFEQIPEP 351

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VVSWN+LI G ++NG V  A+E+F +MP R+ ISW  M+ G  Q    EEA+ L + + 
Sbjct: 352 IVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELH 411

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              +     ++  +  AC  + AL+    +++   K G   +     AL+ M+ +C + +
Sbjct: 412 RSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNME 471

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A QVF RM  +D+ +W + + A+      ++A   F+ ML +    D + +  +++A +
Sbjct: 472 YARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYA 527

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           H    N+    F++M   H    ++ +   +  LLG  G LG +
Sbjct: 528 HAEQSNEAMGAFKTMFCEH----ELPNSPILTILLGVCGSLGAS 567



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 168/366 (45%), Gaps = 19/366 (5%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G V  A+++F     R+++  N+++S Y   G+   A  + D +     R   + +  
Sbjct: 46  RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILL-- 103

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
             S   +LG +L  R     +L      W    N MI  Y++ G   MA R+FD M ++ 
Sbjct: 104 --SGYGRLGRVLEARRVFDGMLERNTVAW----NAMISCYVQNGDITMARRLFDAMPSRD 157

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V SWNS++ G   +  +  AR +F +MP R+ +SW  M+ G  +     +A ++F  M  
Sbjct: 158 VSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR-CGDPQ 524
           E +  D+       SA   LG LD+ + +     K G   D+ + TA++++++R      
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLD 277

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A++ F  M +R+   W+  I A++  G  + A+ ++     + I   + +  G L  C 
Sbjct: 278 TAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LAQC- 335

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
             G ++    LF  + +     P +V +  ++    + G++ EA +L   MP   N + W
Sbjct: 336 --GRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISW 387

Query: 645 GSLLAA 650
             ++A 
Sbjct: 388 AGMIAG 393



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 120/256 (46%), Gaps = 14/256 (5%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C+ +   +Q    ++ + +    S+++ +V         + L  A+  FD  +  ++ S 
Sbjct: 467 CRNMEYARQVFSRMVTKDIVSWNSFLAALVQN-------DLLDEARNTFDNMLSRDDVS- 518

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               + ++I  Y+      EA+  +  +     LP+      +L  C    A   G Q+H
Sbjct: 519 ----WTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIH 574

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
              +K+G D ++ V N LI+ Y +CG   D RR+FD M ER++ +W ++I   A+  L +
Sbjct: 575 TVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGR 633

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALMVNAL 280
           EA+ ++  M   G+ PN VT V +++AC+    ++ G +    + +  G+         +
Sbjct: 634 EAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACM 693

Query: 281 VDMYMKCGAVDTAKQL 296
           VD+  + G V  A+Q 
Sbjct: 694 VDLLGRTGDVQGAEQF 709



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 137/303 (45%), Gaps = 19/303 (6%)

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           S C+  I    + G+   A  +FD M  + +++WNS+I+    NG  ++AR+++  + G 
Sbjct: 35  SGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGG 94

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL--GALDLAKW 493
           +  +   +L G  +     EA  +F  ML      +R T+   A    Y+  G + +A+ 
Sbjct: 95  NMRTGAILLSGYGRLGRVLEARRVFDGML------ERNTVAWNAMISCYVQNGDITMARR 148

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++  +       D+    +++  +        A  +F +M +R++ +WT  I       N
Sbjct: 149 LFDAMPSR----DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIEN 204

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
             +A ++F +M R+G+ PD   F   L+A    G ++    L R +    G    +V   
Sbjct: 205 HGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL-RVLALKTGFERDVVIGT 263

Query: 614 CMVDLLGR-AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            ++++  R   +L  A+   +SM +E N+  W +++AA      +D A    ER    DP
Sbjct: 264 AILNVYSRDTSVLDTAIKFFESM-IERNEYTWSTMIAALSHGGRIDAAIAVYER----DP 318

Query: 673 EKS 675
            KS
Sbjct: 319 VKS 321


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/764 (34%), Positives = 427/764 (55%), Gaps = 42/764 (5%)

Query: 85   YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
            YA K F Y    ++  + + ++N  +  +   G   EA+  +V++    +  D  TF  +
Sbjct: 886  YATKLFMY----DDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVM 941

Query: 145  LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
            L      +    G Q+HG +++ G D+ V V NCLIN Y + G +   R VF +M+E ++
Sbjct: 942  LTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDL 1001

Query: 205  VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
            +SW ++I  C    L + +V +F  ++ + + P+  T+  V+ AC+   +LE G  +   
Sbjct: 1002 ISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACS---SLEGGYYLATQ 1058

Query: 265  IDELGMKA----NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
            I    MKA    ++ +  AL+D+Y K G ++ A+ LF      +L   N IM  Y+  G 
Sbjct: 1059 IHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGD 1118

Query: 321  AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
              +AL +   M   G R D++T+++A  A+  L  L  G+  H  V++ G      + + 
Sbjct: 1119 FPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSG 1178

Query: 381  MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
            ++DMY+KCG                               ++ESAR VFSE+P  D ++W
Sbjct: 1179 VLDMYLKCG-------------------------------EMESARRVFSEIPSPDDVAW 1207

Query: 441  NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
             TM+ G  +    E A+  +  M   +++ D  T   +  AC  L AL+  + I+A I K
Sbjct: 1208 TTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVK 1267

Query: 501  NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
                 D  + T+LVDM+A+CG+ + A  +F+R   R +++W A I  +A  GN ++A++ 
Sbjct: 1268 LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQF 1327

Query: 561  FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
            F  M  +G+ PD + F+GVL+ACSH GLV++ +  F SM   +G+ P+I HY C+VD L 
Sbjct: 1328 FKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALS 1387

Query: 621  RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
            RAG + EA  +I SMP E +  ++ +LL AC+   + +     AE++  L+P  S  +VL
Sbjct: 1388 RAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVL 1447

Query: 681  LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
            LSN+YA+A +W NVA  R  M++  ++K PG S +++  KVH F +GD SH E + I + 
Sbjct: 1448 LSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNK 1507

Query: 741  LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
            +  +  R+R+ GYVPD    L+DV+E++K+  L +HSEKLA+A+GL+ T  +  +RV+KN
Sbjct: 1508 VEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKN 1567

Query: 801  LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            LR+C DCHS  K +SKV+ REI++RD NRFH FR G CSC D+W
Sbjct: 1568 LRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 300/696 (43%), Gaps = 104/696 (14%)

Query: 6    NPSPLVL-----------ATPTVTTLTNQ-HKAKTTPKDSPSIGSLKNCKTLNELKQPHC 53
            NPSP  +           AT T   LT + H   + P+    +        L+  K+ H 
Sbjct: 621  NPSPTAMIMALMHLRLRAATSTANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHA 680

Query: 54   HILKQGLGHKPSYI--SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
             IL  G  H P     + ++   A+ G   SL+ A+K FD      +T+  L  +N+++ 
Sbjct: 681  RILTSG--HHPDRFVTNNLITMYAKCG---SLSSARKLFD---TTPDTNRDLVTWNAILS 732

Query: 112  GYSC-IGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFD 170
              +       +   L+  L    +   + T   V   C  S++      +HG  VK+G  
Sbjct: 733  ALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQ 792

Query: 171  RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
             DVFV   L+N Y + G I + R +FD M+ R+VV W  ++ A     L  EA+ LF E 
Sbjct: 793  WDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEF 852

Query: 231  VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
               G +P+ VT+  +       +N+    +  AY  +L              MY   G+ 
Sbjct: 853  HRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLF-------------MYDDDGS- 898

Query: 291  DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
                         ++++ N  +S +++ G A EA+    +M+      D +T +  ++  
Sbjct: 899  -------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVV 945

Query: 351  AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
            A L  L  G+  HG V+R+GL+   S+ N +I+MY+K G    A  +F  M+   ++SW 
Sbjct: 946  AGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISW- 1004

Query: 411  SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                                          NTM+ G T   + E ++ +F  +L + +  
Sbjct: 1005 ------------------------------NTMISGCTLSGLEECSVGMFVHLLRDSLLP 1034

Query: 471  DRVTMVGVASACGYL-GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D+ T+  V  AC  L G   LA  I+A   K G+  D  ++TAL+D++++ G  + A  +
Sbjct: 1035 DQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFL 1094

Query: 530  FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
            F   +  D+++W A +    + G+  +A+ L+  M   G + D I  V    A   GGLV
Sbjct: 1095 FVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAA--GGLV 1152

Query: 590  NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL------GE---ALDLIKSMPVEPN 640
                   +    IH V   +V  G  +DL   +G+L      GE   A  +   +P  P+
Sbjct: 1153 G-----LKQGKQIHAV---VVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPD 1203

Query: 641  DVIWGSLLAACQKHQNVDIA--AYAAERITELDPEK 674
            DV W ++++ C ++   + A   Y   R++++ P++
Sbjct: 1204 DVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDE 1239


>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/575 (43%), Positives = 350/575 (60%), Gaps = 20/575 (3%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLG---LAREALAILDEMLLHGP-RPDRVTMLS 345
           +D A+ +F +  + N    NTI+          L  EAL +   ML  G  +P+R T  S
Sbjct: 68  IDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF------- 398
            + A A+   L  G+  HG +++ G    + + + ++ MY+ C   E A  +F       
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187

Query: 399 ---------DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
                        +  VV WN +I G ++ GD++SA+ +F EMP R  +SWN M+ G  Q
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQ 247

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
              F EA+ LF+ M S  I  + VT+V V  A   +GAL+L KWI+ Y  KN I  D  L
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVL 307

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
            +ALVDM+++CG    A+QVF  + KR+   W+A IGA AM G  E A+  F+ M + G+
Sbjct: 308 GSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
            P+ + ++G+L+ACSH GLV +G   F  M  + G+ P+I HYGCMVDLLGRAG L EA 
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           +LI++MP+EP+DVIW +LL AC+ H+N+ +    AE + EL P  SG +V LSN+YAS G
Sbjct: 428 ELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLG 487

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
            W  VARVRL+MK   IRK PG S IE++G +HEF   D+SH +   I +ML EM+ +LR
Sbjct: 488 NWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLR 547

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
             GY P+   V L+ DEQE+   L +HSEK+A+AFGLIST+   P+++VKNLR+C DCH+
Sbjct: 548 SNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHA 607

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             KL+S +Y R+IIVRD  RFH F  GSCSC D+W
Sbjct: 608 SLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 205/453 (45%), Gaps = 62/453 (13%)

Query: 18  TTLTNQHKAKTTPKDSPSIGS--LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCA 75
           +T+ N ++        P I S    +CKT  +LKQ H   +K G    P   ++V+  CA
Sbjct: 3   STIYNPNRTFNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCA 62

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG---LGVEAISLYVELAGF 132
              +   + YA+  F    + N      F +N+++R  +      L  EA+ L+  +   
Sbjct: 63  --FSSRDIDYARAVFRQMPEPN-----CFCWNTILRVLAETNDEHLQSEALMLFSAMLCD 115

Query: 133 G-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY-------- 183
           G + P++FTFP VL AC ++S   EG Q+HG IVK GF  D FV + L+  Y        
Sbjct: 116 GRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMED 175

Query: 184 -------------GEC--------------------------GDIVDGRRVFDEMSERNV 204
                        G C                          GDI   + +FDEM +R+V
Sbjct: 176 AYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSV 235

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           VSW  +I   A+     EA+ LF EM    I PN VT+V V+ A A++  LELG  +  Y
Sbjct: 236 VSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLY 295

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
             +  ++ + ++ +ALVDMY KCG++D A Q+F     RN +  + I+  +   G A +A
Sbjct: 296 AGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDA 355

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMID 383
           +     M   G  P+ V  +  +SA +  G +  GR    ++++  GL+        M+D
Sbjct: 356 IIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVD 415

Query: 384 MYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
           +  + G  E A  +  +M      V W +L+  
Sbjct: 416 LLGRAGHLEEAEELIRNMPIEPDDVIWKALLGA 448



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 197/464 (42%), Gaps = 90/464 (19%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYG-ECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           Q+H   +K G  +D      +I F      DI   R VF +M E N   W +++   A  
Sbjct: 37  QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAET 96

Query: 218 D---LPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           +   L  EA+ LF  M+ +G +KPN  T   V+ ACA+   L  G ++   I + G   +
Sbjct: 97  NDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHED 156

Query: 274 ALMVNALVDMYMKC---------------------------------------------- 287
             +++ LV MY+ C                                              
Sbjct: 157 EFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVR 216

Query: 288 -GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
            G + +AK LF E   R++V  N ++S Y + G   EA+ +  EM      P+ VT++S 
Sbjct: 217 LGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSV 276

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           + A A++G L  G+  H Y  +N +E  D + + ++DMY KCG  + A ++F+ +  +  
Sbjct: 277 LPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNA 336

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           ++W+++I     +G                                 E+A+  F +M   
Sbjct: 337 ITWSAIIGAFAMHGRA-------------------------------EDAIIHFHLMGKA 365

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQR 525
            +  + V  +G+ SAC + G ++  +  ++++ K  G+   ++    +VD+  R G  + 
Sbjct: 366 GVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEE 425

Query: 526 AMQVFRRM--EKRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           A ++ R M  E  DV  W A +GA  M  N   GE+  E   E+
Sbjct: 426 AEELIRNMPIEPDDV-IWKALLGACKMHKNLKMGERVAETLMEL 468


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 279/769 (36%), Positives = 429/769 (55%), Gaps = 54/769 (7%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF-GILPDKFTFPFV 144
           A K FD+  + N     L  +NS+I  +S  G   ++  L +E+ G  G+LPD  T   +
Sbjct: 200 AMKVFDFMPETN-----LVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTI 254

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L  C        G+ +HG  VK+G   +V V N ++  Y +CG + + +  F + + +NV
Sbjct: 255 LPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNV 314

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACA-KLQNLELGD-- 259
           VSW ++I A +      EA  L  EM  +G  +K N VT++ V+ AC  KLQ   L +  
Sbjct: 315 VSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELH 374

Query: 260 ----RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
               R C    EL         NA +  Y KCGA+++A+++F    D+ +   N ++  +
Sbjct: 375 GYSFRHCFQHVELS--------NAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGH 426

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            + G  R+AL +L +M   G +PD  T+ S + A A L  L  G+  HGYVLRNGLE   
Sbjct: 427 AQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDF 486

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +  +++  Y+ CGK                                 SAR +F  M  +
Sbjct: 487 FVGTSLLSHYIHCGK-------------------------------ASSARVLFDRMKDK 515

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           + +SWN M+ G +Q  +  E++ LFR  LSE I+   + +V V  AC  L AL L K  +
Sbjct: 516 NLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAH 575

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
            Y+ K     D  +  +++DM+A+ G  + + +VF  ++ ++V++W A I A  + G+G+
Sbjct: 576 GYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGK 635

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+EL+  M + G  PD   ++G+L AC H GLV +G   F+ M + + + P++ HY C+
Sbjct: 636 EAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACL 695

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           +D+L RAG L +AL L+  MP E ++ IW SLL +C+    ++I    A+++ EL+P+K+
Sbjct: 696 IDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKA 755

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
             +VLLSN+YA  GKW  V RVR  MKE G++K  G S IEV G+V+ F  GD   P+  
Sbjct: 756 ENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSA 815

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            I  + R +  R+ + GY P+ ++VL +V E+EK  +L  HSEKLA++FGL+ T+K   +
Sbjct: 816 EIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTL 875

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+ KNLR+C DCH+ AKL+SK  +REI+VRDN RFH FR G CSC D+W
Sbjct: 876 RIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 168/585 (28%), Positives = 289/585 (49%), Gaps = 50/585 (8%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAF 154
           DN  +  L  +N+L+ GY+  GL  + + ++++L +     PD FTFP V+ AC      
Sbjct: 103 DNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDV 162

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  +HG ++KMG   DVFV N L+  YG+CG + +  +VFD M E N+VSW S+ICA 
Sbjct: 163 RLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAF 222

Query: 215 ARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           +     +++  L  EM+ EEG+ P+ VT+V ++  CA    +++G  +     +LG+   
Sbjct: 223 SENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEE 282

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
            ++ NA+V MY KCG ++ A+  F +  ++N+V  NT++S +   G   EA  +L EM +
Sbjct: 283 VMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQI 342

Query: 334 HGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
            G   + + VT+L+ + A      L   +  HGY  R+  +  + + N  I  Y KCG  
Sbjct: 343 QGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILAYAKCGAL 401

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             A ++F  + +KTV SWN+LI G  +NGD   A  +                       
Sbjct: 402 NSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHL----------------------- 438

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
                  LF++  S + + D  T+  +  AC +L +L   K I+ Y+ +NG+  D  + T
Sbjct: 439 -------LFQMTYSGQ-QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGT 490

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           +L+  +  CG    A  +F RM+ +++ +W A I   +  G   +++ LF + L +GI+ 
Sbjct: 491 SLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQS 550

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG-----VSPQIVHYGC-MVDLLGRAGLL 625
             I  V V  ACS    +  G        + HG     +  +    GC ++D+  ++G +
Sbjct: 551 HEIAIVSVFGACSQLSALRLG-------KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCI 603

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
            E+  +   +  + N   W +++ A   H +   A    ER+ ++
Sbjct: 604 KESRKVFDGLK-DKNVASWNAIIVAHGIHGHGKEAIELYERMKKV 647



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 219/461 (47%), Gaps = 37/461 (8%)

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC-LINFYGECGD 188
           A F  L  K     +L AC        G ++H  +      R+ +V N  LI  Y  CG 
Sbjct: 35  AAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGS 94

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVIS 247
            +D R VFD M  +N++ W +L+    R  L  + V +F ++V +   +P++ T   VI 
Sbjct: 95  PLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIK 154

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC  + ++ LG+ +   + ++G+  +  + NALV MY KCGAVD A ++F    + NLV 
Sbjct: 155 ACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVS 214

Query: 308 CNTIMSNYVRLGLAREALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
            N+++  +   G +R++  +L EML   G  PD VT+++ +   A  G++  G   HG  
Sbjct: 215 WNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLA 274

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           ++ GL     + N M+ MY KCG    A   F   +NK VVSWN++I+     GDV  A 
Sbjct: 275 VKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAF 334

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
            +  EM                              +  E +K + VT++ V  AC    
Sbjct: 335 NLLQEMQ-----------------------------IQGEEMKANEVTILNVLPACLDKL 365

Query: 487 ALDLAKWIYAYIEKNGIHC--DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
            L   K ++ Y  +   HC   ++L+ A +  +A+CG    A +VF  +  + VS+W A 
Sbjct: 366 QLRSLKELHGYSFR---HCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNAL 422

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           IG  A  G+  +A+ L  +M   G +PD      +L AC+H
Sbjct: 423 IGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 192/401 (47%), Gaps = 33/401 (8%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L  LK+ H +  +    H     +  +   A+ G   S   A+K F + I D   S+   
Sbjct: 367 LRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNS---AEKVF-HGIGDKTVSS--- 418

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +N+LI G++  G   +A+ L  ++   G  PD FT   +L AC    +   G ++HG +
Sbjct: 419 -WNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYV 477

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           ++ G + D FV   L++ Y  CG     R +FD M ++N+VSW ++I   ++  LP E++
Sbjct: 478 LRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESL 537

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            LF + + EGI+ + + +V V  AC++L  L LG     Y+ +     +A +  +++DMY
Sbjct: 538 ALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMY 597

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            K G +  ++++F   KD+N+   N I+  +   G  +EA+ + + M   G  PDR T +
Sbjct: 598 AKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYI 657

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN------------TMIDMYMKCGKQE 392
             + A        CG   H  ++  GL+ +  + N             +IDM  + G+ +
Sbjct: 658 GILMA--------CG---HAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLD 706

Query: 393 MACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
            A R+ + M  +     W+SL+      G +E   +V  ++
Sbjct: 707 DALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKL 747



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 6/173 (3%)

Query: 481 ACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           ACG    ++  + ++ ++ +      D  L T L+ M+A CG P  +  VF  ME +++ 
Sbjct: 52  ACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLI 111

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQ-GIKPDSIVFVGVLTACSHGGLVN-QGWHLFR 597
            W A +      G     V++F +++     +PD+  F  V+ AC  GG+++ +   +  
Sbjct: 112 QWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKAC--GGILDVRLGEVIH 169

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            M    G+   +     +V + G+ G + EA+ +   MP E N V W S++ A
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP-ETNLVSWNSMICA 221


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/745 (35%), Positives = 414/745 (55%), Gaps = 14/745 (1%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +  +I GY  I    +A  ++ ++   G+LPD+  F   L+A            +  
Sbjct: 189 LVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV 248

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVD-GRRVFDEMSERNVVSWTSLICACARRDLPK 221
             +K GF+RDV +   ++N Y     ++D   + F+ M ERN  +W+++I A +      
Sbjct: 249 LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRID 308

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            A+ ++     + I   +  ++  ++ C ++ +  +       + E   +   +  NAL+
Sbjct: 309 AAIAVYERDPVKSIACRT-ALITGLAQCGRIDDARI-------LFEQIPEPIVVSWNALI 360

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
             YM+ G V+ AK+LF +   RN +    +++ Y + G + EAL +L E+   G  P   
Sbjct: 361 TGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLS 420

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           ++ S   A + +  L  G   H   ++ G +     CN +I MY KC   E A ++F  M
Sbjct: 421 SLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             K +VSWNS +A L++N  ++ AR  F  M  RD +SW T++          EAM  F+
Sbjct: 481 VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK 540

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M  E    +   +  +   CG LGA  + + I+    K G+  ++ +A AL+ M+ +CG
Sbjct: 541 TMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG 600

Query: 522 --DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
             D +R   +F  ME+RD+  W   I   A  G G +A++++  M   G+ P+ + FVG+
Sbjct: 601 CADSRR---IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGL 657

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L ACSH GLV++GW  F+SM+  +G++P   HY CMVDLLGR G +  A   I  MP+EP
Sbjct: 658 LNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEP 717

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
           + VIW +LL AC+ H+N +I   AAE++  ++P  +G +V+LSNIY+S G W  VA VR 
Sbjct: 718 DTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRK 777

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            MK+QG+ K PG S  ++  K+H F +GD+ H ++  I + L E+   L+  GYVPD   
Sbjct: 778 IMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEF 837

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           VL D+DE++K+  L +HSEKLA+A+ L++T K MPI+++KNLR+C DCH+F K VS V  
Sbjct: 838 VLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTK 897

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           R+I +RD NRFH FR GSCSC DFW
Sbjct: 898 RQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 136/584 (23%), Positives = 251/584 (42%), Gaps = 92/584 (15%)

Query: 77  MGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP 136
           +G    +  A++ FD   + +     +  +NS+I  Y   G+   A  LY  ++G     
Sbjct: 44  LGRLGRVGEAREVFDAMPRRD-----IIAWNSMISAYCHNGMPDAARDLYDAISG----G 94

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           +  T   +L+   +     E  +V   ++    +R+    N +I+ Y + GDI   RR+F
Sbjct: 95  NMRTGAILLSGYGRLGRVLEARRVFDGML----ERNTVAWNAMISCYVQNGDITMARRLF 150

Query: 197 D-------------------------------EMSERNVVSWTSLICACARRDLPKEAVY 225
           D                               +M ERN+VSWT +I    R +   +A  
Sbjct: 151 DAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWD 210

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F +M  EG+ P+       +SA   L NL++ + +     + G + + ++  A++++Y 
Sbjct: 211 IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270

Query: 286 KCGAV-DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           +  +V DTA + F    +RN    +T+++                  L HG R D     
Sbjct: 271 RDTSVLDTAIKFFESMIERNEYTWSTMIA-----------------ALSHGGRIDAAI-- 311

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            AV     +  + C                      +I    +CG+ + A  +F+ +   
Sbjct: 312 -AVYERDPVKSIACR-------------------TALITGLAQCGRIDDARILFEQIPEP 351

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VVSWN+LI G ++NG V  A+E+F +MP R+ ISW  M+ G  Q    EEA+ L + + 
Sbjct: 352 IVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELH 411

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              +     ++  +  AC  + AL+    +++   K G   +     AL+ M+ +C + +
Sbjct: 412 RSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNME 471

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A QVF RM  +D+ +W + + A+      ++A   F+ ML +    D + +  +++A +
Sbjct: 472 YARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYA 527

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           H    N+    F++M   H    ++ +   +  LLG  G LG +
Sbjct: 528 HAEQSNEAMGAFKTMFCEH----ELPNSPILTILLGVCGSLGAS 567



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 168/366 (45%), Gaps = 19/366 (5%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G V  A+++F     R+++  N+++S Y   G+   A  + D +     R   + +  
Sbjct: 46  RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILL-- 103

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
             S   +LG +L  R     +L      W    N MI  Y++ G   MA R+FD M ++ 
Sbjct: 104 --SGYGRLGRVLEARRVFDGMLERNTVAW----NAMISCYVQNGDITMARRLFDAMPSRD 157

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V SWNS++ G   +  +  AR +F +MP R+ +SW  M+ G  +     +A ++F  M  
Sbjct: 158 VSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR-CGDPQ 524
           E +  D+       SA   LG LD+ + +     K G   D+ + TA++++++R      
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLD 277

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A++ F  M +R+   W+  I A++  G  + A+ ++     + I   + +  G L  C 
Sbjct: 278 TAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LAQC- 335

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
             G ++    LF  + +     P +V +  ++    + G++ EA +L   MP   N + W
Sbjct: 336 --GRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISW 387

Query: 645 GSLLAA 650
             ++A 
Sbjct: 388 AGMIAG 393



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 120/256 (46%), Gaps = 14/256 (5%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C+ +   +Q    ++ + +    S+++ +V         + L  A+  FD  +  ++ S 
Sbjct: 467 CRNMEYARQVFSRMVTKDIVSWNSFLAALVQN-------DLLDEARNTFDNMLSRDDVS- 518

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               + ++I  Y+      EA+  +  +     LP+      +L  C    A   G Q+H
Sbjct: 519 ----WTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIH 574

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
              +K+G D ++ V N LI+ Y +CG   D RR+FD M ER++ +W ++I   A+  L +
Sbjct: 575 TVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGR 633

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALMVNAL 280
           EA+ ++  M   G+ PN VT V +++AC+    ++ G +    + +  G+         +
Sbjct: 634 EAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACM 693

Query: 281 VDMYMKCGAVDTAKQL 296
           VD+  + G V  A+Q 
Sbjct: 694 VDLLGRTGDVQGAEQF 709



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 137/303 (45%), Gaps = 19/303 (6%)

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           S C+  I    + G+   A  +FD M  + +++WNS+I+    NG  ++AR+++  + G 
Sbjct: 35  SGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGG 94

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL--GALDLAKW 493
           +  +   +L G  +     EA  +F  ML      +R T+   A    Y+  G + +A+ 
Sbjct: 95  NMRTGAILLSGYGRLGRVLEARRVFDGML------ERNTVAWNAMISCYVQNGDITMARR 148

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++  +       D+    +++  +        A  +F +M +R++ +WT  I       N
Sbjct: 149 LFDAMPSR----DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIEN 204

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
             +A ++F +M R+G+ PD   F   L+A    G ++    L R +    G    +V   
Sbjct: 205 HGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL-RVLALKTGFERDVVIGT 263

Query: 614 CMVDLLGR-AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            ++++  R   +L  A+   +SM +E N+  W +++AA      +D A    ER    DP
Sbjct: 264 AILNVYSRDTSVLDTAIKFFESM-IERNEYTWSTMIAALSHGGRIDAAIAVYER----DP 318

Query: 673 EKS 675
            KS
Sbjct: 319 VKS 321


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 433/748 (57%), Gaps = 37/748 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +++++  ++   +  +AI  ++++   G  P+++ F  V+ AC+ ++    G  ++G
Sbjct: 111 LVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYG 170

Query: 163 AIVKMGF-DRDVFVENCLIN-FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
            +VK G+ + DV V   LI+ F    GD+    +VFD+M ERN+V+WT +I   A+    
Sbjct: 171 FVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCA 230

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           ++A+ LF +M   G  P+  T   V+SAC +L  L LG ++ + +  LG+  +  +  +L
Sbjct: 231 RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSL 290

Query: 281 VDMYMKC---GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG-LAREALAILDEMLLHGP 336
           VDMY KC   G+VD ++++F +  + N++    I++ YV+ G   +EA+ +  +M+    
Sbjct: 291 VDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHI 350

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           RP+  +  S + A   L D   G   + Y ++ G+   + + N++I MY + G+      
Sbjct: 351 RPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR------ 404

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    +E AR+ F  +  ++ +S+N ++ G  +    EEA
Sbjct: 405 -------------------------MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 439

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
             LF  +    I +   T   + S    +GA+   + I+  + K G   +  +  AL+ M
Sbjct: 440 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 499

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           ++RCG+ + A QVF  ME R+V +WT+ I   A  G   +A+E+F++ML  G KP+ I +
Sbjct: 500 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 559

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           V VL+ACSH G++++G   F SM   HG+ P++ HY CMVDLLGR+GLL EA++ I SMP
Sbjct: 560 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 619

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           +  + ++W +LL AC+ H N ++  +AAE I E +P+    ++LLSN++ASAG+W +V +
Sbjct: 620 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 679

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R  MKE+ + K  G S IEV  +VH F  G+ SHP+   I   L ++  ++++ GY+PD
Sbjct: 680 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 739

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
              VL D++E++K+  L  HSEK+A+AFGLISTS++ PIR+ KNLR+C DCH+  K +S 
Sbjct: 740 TDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISM 799

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              REI+VRD+NRFH  + G CSC+D+W
Sbjct: 800 ATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 255/525 (48%), Gaps = 49/525 (9%)

Query: 59  GLGHKPSYISKVVCT-CAQMGTF----ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGY 113
           G   K  Y+   VC  C  +  F      L  A K FD   + N  + TL     +I  +
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTL-----MITRF 224

Query: 114 SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDV 173
           + +G   +AI L++++   G +PD+FT+  VL+ACT+      G Q+H  ++++G   DV
Sbjct: 225 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 284

Query: 174 FVENCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARR-DLPKEAVYLFFE 229
            V   L++ Y +C   G + D R+VF++M E NV+SWT++I A  +  +  KEA+ LF +
Sbjct: 285 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 344

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+   I+PN  +   V+ AC  L +   G++V +Y  +LG+ +   + N+L+ MY + G 
Sbjct: 345 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 404

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           ++ A++ F    ++NLV  N I+  Y +   + EA  + +E+   G      T  S +S 
Sbjct: 405 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 464

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           +A +G +  G   HG +L+ G +    ICN +I MY +CG  E A ++F+ M ++ V+SW
Sbjct: 465 AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 524

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            S+I G  K+G                                   A+E+F  ML    K
Sbjct: 525 TSMITGFAKHG-------------------------------FATRALEMFHKMLETGTK 553

Query: 470 VDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
            + +T V V SAC ++G + +  K   +  +++GI   M+    +VD+  R G    AM+
Sbjct: 554 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 613

Query: 529 VFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
               M    D   W   +GA  + GN E        +L Q  +PD
Sbjct: 614 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQ--EPD 656



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 258/525 (49%), Gaps = 38/525 (7%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD  T+  +L +C +   F  G  VH  +++ G + D  V N LI+ Y +CGD    R +
Sbjct: 42  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 101

Query: 196 FDEM-SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           F+ M ++R++VSW++++   A   +  +A++ F +M+E G  PN      VI AC+    
Sbjct: 102 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 161

Query: 255 LELGDRVCAYIDELG-MKANALMVNALVDMYMK-CGAVDTAKQLFGECKDRNLVLCNTIM 312
             +G+ +  ++ + G ++A+  +   L+DM++K  G + +A ++F +  +RNLV    ++
Sbjct: 162 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 221

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           + + +LG AR+A+ +  +M L G  PDR T  S +SA  +LG L  G+  H  V+R GL 
Sbjct: 222 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 281

Query: 373 GWDSICNTMIDMYMKC---GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
               +  +++DMY KC   G  + + ++F+ M    V+SW ++I   +++G+ +      
Sbjct: 282 LDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECD------ 335

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                   +EA+ELF  M+S  I+ +  +   V  ACG L    
Sbjct: 336 ------------------------KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 371

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
             + +Y+Y  K GI     +  +L+ M+AR G  + A + F  + ++++ ++ A +   A
Sbjct: 372 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 431

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
                E+A  LFNE+   GI   +  F  +L+  +  G + +G  +   +      S Q 
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 491

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +    ++ +  R G +  A  +   M  + N + W S++    KH
Sbjct: 492 I-CNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 534



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 175/361 (48%), Gaps = 38/361 (10%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M ++   P+  T   ++ +C + +N +LG  V   + + G++ +++++N L+ +Y KCG 
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94

Query: 290 VDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +TA+ +F G    R+LV  + ++S +    +  +A+    +ML  G  P+     + + 
Sbjct: 95  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154

Query: 349 ASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMK-CGKQEMACRIFDHMSNKTV 406
           A +       G + +G+V++ G LE    +   +IDM++K  G    A ++FD M  + +
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+W  +I    + G    A ++F +M    ++                            
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVP--------------------------- 247

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC---GDP 523
               DR T   V SAC  LG L L K +++ + + G+  D+ +  +LVDM+A+C   G  
Sbjct: 248 ----DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 303

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGN-GEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
             + +VF +M + +V +WTA I A    G   ++A+ELF +M+   I+P+   F  VL A
Sbjct: 304 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 363

Query: 583 C 583
           C
Sbjct: 364 C 364



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 147/339 (43%), Gaps = 39/339 (11%)

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           +G    A + LD M      PD  T    + +  +  +   G++ H  ++++GLE    +
Sbjct: 22  VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 81

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            NT+I +Y KCG  E A  IF+ M NK                              RD 
Sbjct: 82  LNTLISLYSKCGDTETARLIFEGMGNK------------------------------RDL 111

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           +SW+ M+      +M  +A+  F  ML      +      V  AC       + + IY +
Sbjct: 112 VSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGF 171

Query: 498 IEKNG-IHCDMQLATALVDMFAR-CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           + K G +  D+ +   L+DMF +  GD   A +VF +M +R++  WT  I   A  G   
Sbjct: 172 VVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCAR 231

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC- 614
            A++LF +M   G  PD   +  VL+AC+  GL+  G  L   +  + G++  +   GC 
Sbjct: 232 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRL-GLALDVC-VGCS 289

Query: 615 MVDLLGRAGLLGEALD---LIKSMPVEPNDVIWGSLLAA 650
           +VD+  +    G   D   + + MP E N + W +++ A
Sbjct: 290 LVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 327



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 19/231 (8%)

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
              A     +M  +    D  T   +  +C       L K ++  + ++G+  D  +   
Sbjct: 25  LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 84

Query: 513 LVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           L+ ++++CGD + A  +F  M  KRD+ +W+A +   A      QA+  F +ML  G  P
Sbjct: 85  LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 144

Query: 572 DSIVFVGVLTACSHGGLVNQGW--HLFRSMTDIHGVSPQIVHYGC-MVDLLGR-AGLLGE 627
           +   F  V+ ACS+    N  W   +        G     V  GC ++D+  + +G LG 
Sbjct: 145 NEYCFAAVIRACSNA---NYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201

Query: 628 ALDLIKSMPVEPNDVIWGSLLA-----ACQKHQ-----NVDIAAYAAERIT 668
           A  +   MP E N V W  ++       C +       +++++ Y  +R T
Sbjct: 202 AYKVFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFT 251


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/683 (37%), Positives = 395/683 (57%), Gaps = 64/683 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F+ + E N++ W ++    A       A+ L+  M+  G+ PNS +   ++ +CAK + 
Sbjct: 21  IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGA------------------------- 289
           L  G ++  ++ +LG   +  +  +L+ MY + G                          
Sbjct: 81  LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140

Query: 290 ------VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
                 ++ A++LF E   +++V  N ++S YV     +EAL +  +M+    +PD  TM
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           ++ VSA AQ G +  GR  H ++  +G      I N +ID+Y KCG              
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCG-------------- 246

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                            +VE+A  +F  +  +D ISWNT++GG T  N+++EA+ LF+ M
Sbjct: 247 -----------------EVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEM 289

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCG 521
           L      + VTM+ V  AC +LGA+D+ +WI+ YI K   G+     L T+L+DM+A+CG
Sbjct: 290 LRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCG 349

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           D + A QVF  M  R +S+W A I   AM G    A +LF++M + GI PD I FVG+L+
Sbjct: 350 DIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 409

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH G+++ G H+FRSM+  + ++P++ HYGCM+DLLG  GL  EA ++I++MP+EP+ 
Sbjct: 410 ACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDG 469

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           VIW SLL AC+ H NV++    A+ + +++PE  G +VLLSNIYA+AG+W  VA++R  +
Sbjct: 470 VIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLL 529

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            ++GI+K PG SSIE++  VHEF  GD+ HP    I  ML EM   + + G+VPD + VL
Sbjct: 530 NDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVL 589

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +++E+ K+  L HHSEKLA+AFGLIST     + +VKNLR+C +CH   KL+SK+Y RE
Sbjct: 590 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKRE 649

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           II RD  R H  + G  SC D+W
Sbjct: 650 IIARDRTRLHLLKDGVWSCHDYW 672



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 164/529 (31%), Positives = 274/529 (51%), Gaps = 73/529 (13%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F+ L+YA   F+   + N     L ++N++ RG++     V A+ LYV +   G+LP+ +
Sbjct: 12  FDGLSYAISIFETIQEPN-----LLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSY 66

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           +FPF+L +C KS A  EG Q+HG ++K+G+D D++V   LI+ Y + G + D  +VFD  
Sbjct: 67  SFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRS 126

Query: 200 SERNVVSWTSLICACARRDLP-------------------------------KEAVYLFF 228
           S R+VVS+T+LI   A R                                  KEA+ L+ 
Sbjct: 127 SHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYK 186

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M++  +KP+  TMV V+SACA+  ++ELG ++ ++I++ G  +N  +VN L+D+Y KCG
Sbjct: 187 DMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCG 246

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            V+TA  LF     ++++  NT++  +  + L +EAL +  EML  G  P+ VTMLS + 
Sbjct: 247 EVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 306

Query: 349 ASAQLGDLLCGRMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           A A LG +  GR  H Y+ +   G+    S+  ++IDMY KCG  E A ++FD M  +++
Sbjct: 307 ACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 366

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
            SWN++I G   +G   +A ++FS+M                                  
Sbjct: 367 SSWNAMIFGFAMHGKANAAFDLFSKMR-------------------------------KN 395

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQR 525
            I  D +T VG+ SAC + G LDL + I+  + ++  I   ++    ++D+   CG  + 
Sbjct: 396 GIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKE 455

Query: 526 AMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           A ++ R M  + D   W + + A  M  N E        +++  I+P++
Sbjct: 456 AKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIK--IEPEN 502



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 210/412 (50%), Gaps = 35/412 (8%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F   ++ NL++ NT+   +     +  AL +   M+  G  P+  +    + + A+
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
              L+ G+  HG+VL+ G +    +  ++I MY + G+ E A ++FD  S++ VVS+ +L
Sbjct: 78  SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I G    G + +AR++F E+  +D +SWN M+ G  +   F+EA+EL++ M+   +K D 
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            TMV V SAC   G+++L + ++++IE +G   ++++   L+D++++CG+ + A  +F+ 
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           + K+DV +W   IG        ++A+ LF EMLR G  P+ +  + VL AC+H G ++ G
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 317

Query: 593 -W----------------HLFRSMTDIHG---------------VSPQIVHYGCMVDLLG 620
            W                 L  S+ D++                ++  +  +  M+    
Sbjct: 318 RWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFA 377

Query: 621 RAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
             G    A DL   M    ++P+D+ +  LL+AC     +D+  +    +++
Sbjct: 378 MHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 199/422 (47%), Gaps = 44/422 (10%)

Query: 39  LKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY--- 92
           LK+C   K L E +Q H H+LK G        + ++   AQ G  E    A K FD    
Sbjct: 72  LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLED---AHKVFDRSSH 128

Query: 93  -----------------YIK------DNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
                            YI       D  +   +  +N++I GY       EA+ LY ++
Sbjct: 129 RHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDM 188

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
               + PD+ T   V++AC +S +   G Q+H  I   GF  ++ + N LI+ Y +CG++
Sbjct: 189 MKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEV 248

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                +F  +++++V+SW +LI      +L KEA+ LF EM+  G  PN VTM+ V+ AC
Sbjct: 249 ETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 308

Query: 250 AKLQNLELGDRVCAYIDEL--GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           A L  +++G  +  YI++   G+   + ++ +L+DMY KCG ++ AKQ+F     R+L  
Sbjct: 309 AHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS 368

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MC 362
            N ++  +   G A  A  +  +M  +G  PD +T +  +SA +  G L  GR     M 
Sbjct: 369 WNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMS 428

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGD 421
             Y +   LE +      MID+   CG  + A  +   M      V W SL+     + +
Sbjct: 429 QDYKITPKLEHY----GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNN 484

Query: 422 VE 423
           VE
Sbjct: 485 VE 486


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/764 (35%), Positives = 428/764 (56%), Gaps = 37/764 (4%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+ AFD   + N     L+ +  L+  ++  G   E +     +   G+ PD  TF   L
Sbjct: 11  AKAAFDALEQRN-----LYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 65

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNV 204
            +C    +  +G+++H  +V    + D  V N L+N Y +CG +   +RVF +M   RNV
Sbjct: 66  GSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNV 125

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +SW+ +  A A      EA+  F  M+  GIK     MV ++SAC+    ++ G  + + 
Sbjct: 126 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSC 185

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNTIMSNYVRLGLAR 322
           I   G ++  L+ NA++ MY +CGAV+ A+++F    +  R++V  N ++S YV     +
Sbjct: 186 IALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGK 245

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +A+ +   M L   RPD+VT +S +SA +   D+  GR+ H  ++ + LE    + N ++
Sbjct: 246 DAIQLYQRMQL---RPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALV 302

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY KCG    A  +FD M  ++++SW ++I+  ++   V  A  +F +M          
Sbjct: 303 SMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM---------- 352

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
                         +EL +   S+R+K D +  V + +AC  + AL+  K +       G
Sbjct: 353 --------------LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCG 398

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAMAMEGNGEQAVELF 561
           +  D  + TA+V+++ +CG+ + A ++F  +  R DV  W A I   A  G   +A++LF
Sbjct: 399 LSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLF 458

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM-TDIHGVSPQIVHYGCMVDLLG 620
             M  +G++PDS  FV +L ACSH GL +QG   F SM T+   V+  I H+GC+ DLLG
Sbjct: 459 WRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLG 518

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           R G L EA + ++ +PV+P+ V W SLLAAC+ H+++  A   A ++  L+P  +  +V 
Sbjct: 519 RGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVA 578

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSNIYA   KW  VA+VR  M EQG++K  G S+IE+   +H+F +GD++HP    I   
Sbjct: 579 LSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREE 638

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L +++ ++++ GYVPD   VL  VDEQEK+ LL  HSE+LA+A GLIST    P+RV KN
Sbjct: 639 LAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKN 698

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH+  KL+SK+  R+I+VRD  RFH F+ G CSC D+W
Sbjct: 699 LRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 235/481 (48%), Gaps = 51/481 (10%)

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            Y  C    D +  FD + +RN+ SWT L+ A A     KE +     M ++G++P++VT
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC- 300
            +  + +C   ++L  G R+   + +  ++ +  + NAL++MY KCG++  AK++F +  
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR---VTMLSAVSASAQLGDLL 357
           + RN++  + +   +   G   EAL     MLL G +  +   VT+LSA S+ A + D  
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD-- 178

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN--KTVVSWNSLIAG 415
            GRM H  +  +G E    + N ++ MY +CG  E A ++FD M    + VVSWN +++ 
Sbjct: 179 -GRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
            + N              G+D                   A++L++ M   +++ D+VT 
Sbjct: 238 YVHNDR------------GKD-------------------AIQLYQRM---QLRPDKVTY 263

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
           V + SAC     + L + ++  I  + +  ++ +  ALV M+A+CG    A  VF +ME+
Sbjct: 264 VSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQ 323

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-------QGIKPDSIVFVGVLTACSHGGL 588
           R + +WT  I A        +A  LF +ML        Q +KPD++ FV +L AC+    
Sbjct: 324 RSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSA 383

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + QG  +        G+S        +V+L G+ G + EA  +  ++   P+  +W +++
Sbjct: 384 LEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMI 442

Query: 649 A 649
           A
Sbjct: 443 A 443



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 176/400 (44%), Gaps = 39/400 (9%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY  C +   AK  F   + RNL     +++ +   G ++E L  L+ M   G RPD VT
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            ++A+ +      L  G   H  V+ + LE    + N +++MY KCG    A R+F  M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                                           R+ ISW+ M G         EA+  FR 
Sbjct: 121 RT------------------------------RNVISWSIMAGAHALHGNVWEALRHFRF 150

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML   IK  +  MV + SAC     +   + I++ I  +G   ++ +A A++ M+ RCG 
Sbjct: 151 MLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGA 210

Query: 523 PQRAMQVFRRMEK--RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
            + A +VF  M++  RDV +W   +        G+ A++L+  M    ++PD + +V +L
Sbjct: 211 VEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLL 267

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
           +ACS    V  G  L + + +   +   ++    +V +  + G   EA  +   M  E  
Sbjct: 268 SACSSAEDVGLGRVLHKQIVN-DELEKNVIVGNALVSMYAKCGSHTEARAVFDKM--EQR 324

Query: 641 DVI-WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            +I W ++++A  + + V  A +  +++ EL+   S   V
Sbjct: 325 SIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV 364


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 433/748 (57%), Gaps = 37/748 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +++++  ++   +  +AI  ++++   G  P+++ F  V+ AC+ ++    G  ++G
Sbjct: 93  LVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYG 152

Query: 163 AIVKMGF-DRDVFVENCLIN-FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
            +VK G+ + DV V   LI+ F    GD+    +VFD+M ERN+V+WT +I   A+    
Sbjct: 153 FVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCA 212

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           ++A+ LF +M   G  P+  T   V+SAC +L  L LG ++ + +  LG+  +  +  +L
Sbjct: 213 RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSL 272

Query: 281 VDMYMKC---GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG-LAREALAILDEMLLHGP 336
           VDMY KC   G+VD ++++F +  + N++    I++ YV+ G   +EA+ +  +M+    
Sbjct: 273 VDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHI 332

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           RP+  +  S + A   L D   G   + Y ++ G+   + + N++I MY + G+      
Sbjct: 333 RPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR------ 386

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    +E AR+ F  +  ++ +S+N ++ G  +    EEA
Sbjct: 387 -------------------------MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 421

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
             LF  +    I +   T   + S    +GA+   + I+  + K G   +  +  AL+ M
Sbjct: 422 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 481

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           ++RCG+ + A QVF  ME R+V +WT+ I   A  G   +A+E+F++ML  G KP+ I +
Sbjct: 482 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 541

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           V VL+ACSH G++++G   F SM   HG+ P++ HY CMVDLLGR+GLL EA++ I SMP
Sbjct: 542 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 601

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           +  + ++W +LL AC+ H N ++  +AAE I E +P+    ++LLSN++ASAG+W +V +
Sbjct: 602 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 661

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R  MKE+ + K  G S IEV  +VH F  G+ SHP+   I   L ++  ++++ GY+PD
Sbjct: 662 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 721

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
              VL D++E++K+  L  HSEK+A+AFGLISTS++ PIR+ KNLR+C DCH+  K +S 
Sbjct: 722 TDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISM 781

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              REI+VRD+NRFH  + G CSC+D+W
Sbjct: 782 ATGREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 254/521 (48%), Gaps = 49/521 (9%)

Query: 63  KPSYISKVVCT-CAQMGTF----ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
           K  Y+   VC  C  +  F      L  A K FD   + N  + TL     +I  ++ +G
Sbjct: 156 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTL-----MITRFAQLG 210

Query: 118 LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
              +AI L++++   G +PD+FT+  VL+ACT+      G Q+H  ++++G   DV V  
Sbjct: 211 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 270

Query: 178 CLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARR-DLPKEAVYLFFEMVEE 233
            L++ Y +C   G + D R+VF++M E NV+SWT++I A  +  +  KEA+ LF +M+  
Sbjct: 271 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 330

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
            I+PN  +   V+ AC  L +   G++V +Y  +LG+ +   + N+L+ MY + G ++ A
Sbjct: 331 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           ++ F    ++NLV  N I+  Y +   + EA  + +E+   G      T  S +S +A +
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
           G +  G   HG +L+ G +    ICN +I MY +CG  E A ++F+ M ++ V+SW S+I
Sbjct: 451 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 510

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            G  K+G                                   A+E+F  ML    K + +
Sbjct: 511 TGFAKHG-------------------------------FATRALEMFHKMLETGTKPNEI 539

Query: 474 TMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           T V V SAC ++G + +  K   +  +++GI   M+    +VD+  R G    AM+    
Sbjct: 540 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 599

Query: 533 ME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           M    D   W   +GA  + GN E        +L Q  +PD
Sbjct: 600 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQ--EPD 638



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 258/525 (49%), Gaps = 38/525 (7%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD  T+  +L +C +   F  G  VH  +++ G + D  V N LI+ Y +CGD    R +
Sbjct: 24  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 83

Query: 196 FDEM-SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           F+ M ++R++VSW++++   A   +  +A++ F +M+E G  PN      VI AC+    
Sbjct: 84  FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 143

Query: 255 LELGDRVCAYIDELG-MKANALMVNALVDMYMK-CGAVDTAKQLFGECKDRNLVLCNTIM 312
             +G+ +  ++ + G ++A+  +   L+DM++K  G + +A ++F +  +RNLV    ++
Sbjct: 144 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 203

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           + + +LG AR+A+ +  +M L G  PDR T  S +SA  +LG L  G+  H  V+R GL 
Sbjct: 204 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 263

Query: 373 GWDSICNTMIDMYMKC---GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
               +  +++DMY KC   G  + + ++F+ M    V+SW ++I   +++G+ +      
Sbjct: 264 LDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECD------ 317

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                   +EA+ELF  M+S  I+ +  +   V  ACG L    
Sbjct: 318 ------------------------KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 353

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
             + +Y+Y  K GI     +  +L+ M+AR G  + A + F  + ++++ ++ A +   A
Sbjct: 354 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 413

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
                E+A  LFNE+   GI   +  F  +L+  +  G + +G  +   +      S Q 
Sbjct: 414 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 473

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +    ++ +  R G +  A  +   M  + N + W S++    KH
Sbjct: 474 I-CNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 516



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 175/361 (48%), Gaps = 38/361 (10%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M ++   P+  T   ++ +C + +N +LG  V   + + G++ +++++N L+ +Y KCG 
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 290 VDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +TA+ +F G    R+LV  + ++S +    +  +A+    +ML  G  P+     + + 
Sbjct: 77  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136

Query: 349 ASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMK-CGKQEMACRIFDHMSNKTV 406
           A +       G + +G+V++ G LE    +   +IDM++K  G    A ++FD M  + +
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+W  +I    + G    A ++F +M    ++                            
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVP--------------------------- 229

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC---GDP 523
               DR T   V SAC  LG L L K +++ + + G+  D+ +  +LVDM+A+C   G  
Sbjct: 230 ----DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 285

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGN-GEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
             + +VF +M + +V +WTA I A    G   ++A+ELF +M+   I+P+   F  VL A
Sbjct: 286 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 345

Query: 583 C 583
           C
Sbjct: 346 C 346



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 147/339 (43%), Gaps = 39/339 (11%)

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           +G    A + LD M      PD  T    + +  +  +   G++ H  ++++GLE    +
Sbjct: 4   VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 63

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            NT+I +Y KCG  E A  IF+ M NK                              RD 
Sbjct: 64  LNTLISLYSKCGDTETARLIFEGMGNK------------------------------RDL 93

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           +SW+ M+      +M  +A+  F  ML      +      V  AC       + + IY +
Sbjct: 94  VSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGF 153

Query: 498 IEKNG-IHCDMQLATALVDMFAR-CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           + K G +  D+ +   L+DMF +  GD   A +VF +M +R++  WT  I   A  G   
Sbjct: 154 VVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCAR 213

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC- 614
            A++LF +M   G  PD   +  VL+AC+  GL+  G  L   +  + G++  +   GC 
Sbjct: 214 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRL-GLALDVC-VGCS 271

Query: 615 MVDLLGRAGLLGEALD---LIKSMPVEPNDVIWGSLLAA 650
           +VD+  +    G   D   + + MP E N + W +++ A
Sbjct: 272 LVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 309



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 19/231 (8%)

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
              A     +M  +    D  T   +  +C       L K ++  + ++G+  D  +   
Sbjct: 7   LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 66

Query: 513 LVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           L+ ++++CGD + A  +F  M  KRD+ +W+A +   A      QA+  F +ML  G  P
Sbjct: 67  LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 126

Query: 572 DSIVFVGVLTACSHGGLVNQGW--HLFRSMTDIHGVSPQIVHYGC-MVDLLGR-AGLLGE 627
           +   F  V+ ACS+    N  W   +        G     V  GC ++D+  + +G LG 
Sbjct: 127 NEYCFAAVIRACSNA---NYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183

Query: 628 ALDLIKSMPVEPNDVIWGSLLA-----ACQKHQ-----NVDIAAYAAERIT 668
           A  +   MP E N V W  ++       C +       +++++ Y  +R T
Sbjct: 184 AYKVFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFT 233


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 294/885 (33%), Positives = 458/885 (51%), Gaps = 115/885 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKP--------------SYISKVVCTCAQMGTFESLT 84
           LK C+++N ++Q H  I+  GL   P              SY+S        + ++ +  
Sbjct: 38  LKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASYLACG 97

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
               A    + +    +    +N L+R +   G    AI +   +   G  PD FT P+ 
Sbjct: 98  ATSDALS--VLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYA 155

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-- 202
           L AC +  ++  G   HG I   GF+ +VFV N L+  Y   G + D   VFDE++ +  
Sbjct: 156 LKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGI 215

Query: 203 -NVVSWTSLICACARRDLPKEAVYLFFEMV----EEGIKPNS--VTMVCVISACAKLQNL 255
            +V+SW S++ A  +   P+ A+ LF EM     E+     S  +++V ++ ACA L+ L
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKAL 275

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKD----------- 302
                + +Y    G  A+A + NAL+D Y KCG++  A  +F   E KD           
Sbjct: 276 PQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGY 335

Query: 303 ----------------------RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                                  +++  + +++ Y + G  +EAL    +M+L+G  P+ 
Sbjct: 336 TQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNS 395

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS------------ICNTMIDMYMKC 388
           VT++S +SA A LG L  G   H Y L+  L   D+            + N +IDMY KC
Sbjct: 396 VTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKC 455

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH--ISWNTMLGG 446
                  R F                        ++AR +F+ +P R+   ++W  M+GG
Sbjct: 456 -------RSF------------------------KAARTIFNSIPRRERNVVTWTVMIGG 484

Query: 447 LTQENMFEEAMELFRVMLSERIKV--DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
             Q     +A++LF  M+S+   V  +  T+  +  AC +L +L + K I+AY+ +   H
Sbjct: 485 YAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR---H 541

Query: 505 CDMQ-----LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
            + +     +A  L+DM+++CGD   A  VF  M KR+  +WT+ +    M G G++A++
Sbjct: 542 HEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALD 601

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           +F++M + G  PD I F+ +L ACSH G+V+QG   F  M   +GV     HY C++DLL
Sbjct: 602 IFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLL 661

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            R+G L +A   I+ MP+EP+  IW +LL+AC+ H NV++A YA  ++  +  E  G + 
Sbjct: 662 ARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYT 721

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           L+SNIYA+A +W +VAR+R  MK+ GI+K PG S ++       F  GD SHP    I S
Sbjct: 722 LISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYS 781

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           +L  +  R++  GYVP+    L DVD++EK  LL+ HSEKLA+A+GL++TS   PIR+ K
Sbjct: 782 LLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITK 841

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCHS    +SK+ D EIIVRD++RFH F+ GSCSC  +W
Sbjct: 842 NLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/763 (35%), Positives = 412/763 (53%), Gaps = 36/763 (4%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SLT A+K FD          ++  +NS+I  YS      EA  ++  +   G   D+ TF
Sbjct: 210 SLTDARKVFD-----GMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTF 264

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L+AC        G  V  +I +  F+ D+FV   LI  Y  C    D  +VF  M +
Sbjct: 265 LSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQ 324

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            N+++W+++I A A      EA+  F  M +EGI PN VT + +++       LE   R+
Sbjct: 325 TNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI 384

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
              I E G+     M NALV++Y +C + D A+ +F + +  NL+  N+++  YV+    
Sbjct: 385 HLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERH 444

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            +AL +   M   G +PDRV  ++ + A          ++ H  V  +GL G   +  ++
Sbjct: 445 DDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSL 504

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           ++MY K G                               +++ A  +  EM  +   +WN
Sbjct: 505 VNMYAKAG-------------------------------ELDVAEVILQEMDEQQITAWN 533

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            ++ G        EA+E ++ +  E I VD+VT + V +AC    +L   K I++   + 
Sbjct: 534 VLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVEC 593

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G+  D+ +  AL +M+++CG  + A ++F  M  R   +W   + A A  G  E+ ++L 
Sbjct: 594 GLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLI 653

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
            +M ++G+K + I FV VL++CSH GL+ +G   F S+    G+  +  HYGC+VDLLGR
Sbjct: 654 RKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGR 713

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG L EA   I  MP+EP  V W SLL AC+  +++D    AA ++ ELDP  S   V+L
Sbjct: 714 AGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVL 773

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIY+  G W N A++R  M  + ++K+PG SSI+V  KVHEF   D SHP    I   +
Sbjct: 774 SNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKV 833

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
            E+   +R+AGYVPD   VL DVDE++K+ LL++HSEKLA+AFGLIST +T  + + KNL
Sbjct: 834 EELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNL 893

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH+  K +SK+  REI+VRDN+RFH FR GSCSC D+W
Sbjct: 894 RVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/629 (24%), Positives = 289/629 (45%), Gaps = 45/629 (7%)

Query: 30  PKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQM---GTFESLTYA 86
           P     +  L +C +  EL+     IL   L  +  +    +   A +   G   +L  A
Sbjct: 56  PNAITLVAVLNSCGSFRELRDG---ILVHALSLERGFFQNTLVATALLNMYGKCGTLLDA 112

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGILPDKFTFPFVL 145
           Q  F+   + N     +  +N+++  YS  G   + A+ L+  +   G+  +  TF  VL
Sbjct: 113 QSVFEEMAEKN-----VVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVL 167

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           N+     A  +G  +H  + +     DVFV   L+N Y +CG + D R+VFD M  R+V 
Sbjct: 168 NSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVG 227

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           +W S+I A +  +   EA ++F  M +EG + + VT + ++ AC   + L+ G  V   I
Sbjct: 228 TWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESI 287

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            E   + +  +  AL+ MY +C + + A Q+FG  K  NL+  + I++ +   G   EAL
Sbjct: 288 SETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEAL 347

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
                M   G  P+RVT +S ++       L      H  +  +GL+   ++ N ++++Y
Sbjct: 348 RYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVY 407

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            +C   + A  +FD +    ++SWNS                               M+G
Sbjct: 408 GRCESPDDARTVFDQLELPNLISWNS-------------------------------MIG 436

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
              Q    ++A++LFR M  + I+ DRV  + +  AC         K ++  +E++G+  
Sbjct: 437 IYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGG 496

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
              + T+LV+M+A+ G+   A  + + M+++ ++AW   I   A+ G   +A+E + ++ 
Sbjct: 497 SPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQ 556

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
            + I  D + F+ VL AC+    + +G  +  +  +  G+   ++    + ++  + G +
Sbjct: 557 LEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVEC-GLDSDVIVKNALTNMYSKCGSM 615

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             A  +  SMP+  + V W  +L A  +H
Sbjct: 616 ENARRIFDSMPIR-SAVSWNGMLQAYAQH 643



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 166/678 (24%), Positives = 295/678 (43%), Gaps = 84/678 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N +I  YS      EA++L+  +   G+ P+  T   VLN+C       +G+ VH   +
Sbjct: 26  WNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSL 85

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP-KEAV 224
           + GF ++  V   L+N YG+CG ++D + VF+EM+E+NVV+W +++   + +    K AV
Sbjct: 86  ERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAV 145

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            LF  M+ EG+K N +T + V+++      L  G  + + + E     +  +  ALV+ Y
Sbjct: 146 ELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTY 205

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KCG++  A+++F     R++   N+++S Y     + EA  I   M   G R DRVT L
Sbjct: 206 TKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFL 265

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A      L  G+     +     E    +   +I MY +C   E A ++F  M   
Sbjct: 266 SILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQT 325

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            +++W+++I     +G                                  EA+  FR+M 
Sbjct: 326 NLITWSAIITAFADHGHC-------------------------------GEALRYFRMMQ 354

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
            E I  +RVT + + +       L+    I+  I ++G+     +  ALV+++ RC  P 
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC- 583
            A  VF ++E  ++ +W + IG        + A++LF  M +QGI+PD + F+ +L AC 
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474

Query: 584 --SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
             SHG    +   L     +  G+    +    +V++  +AG L  A  +++ M  E   
Sbjct: 475 IGSHG----RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQI 529

Query: 642 VIWGSLL----------AACQKHQNVDIAAYAAERITELD-----------PEKSGVHV- 679
             W  L+           A + +Q + + A   +++T +             E   +H  
Sbjct: 530 TAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSN 589

Query: 680 --------------LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFT 725
                          L+N+Y+  G   N  R+           +P  S++  NG +  + 
Sbjct: 590 AVECGLDSDVIVKNALTNMYSKCGSMENARRI--------FDSMPIRSAVSWNGMLQAYA 641

Query: 726 SGDESHPEMNNISSMLRE 743
              ES   +  I  M +E
Sbjct: 642 QHGESEEVLKLIRKMEQE 659



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 230/479 (48%), Gaps = 39/479 (8%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y  CG + D    F ++  RNVVSW  +I A +     +EA+ LF  M+ EG+ PN++T+
Sbjct: 2   YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           V V+++C   + L  G  V A   E G   N L+  AL++MY KCG +  A+ +F E  +
Sbjct: 62  VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121

Query: 303 RNLVLCNTIMSNYVRLGLA-REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           +N+V  N ++  Y   G   + A+ +   MLL G + + +T L+ +++      L  G+ 
Sbjct: 122 KNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKF 181

Query: 362 CHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
            H  V R      D   NT +++ Y KCG    A ++FD M  ++V +WNS+I+      
Sbjct: 182 IHSCV-RESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY---- 236

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
                    SE  G                    EA  +F+ M  E  + DRVT + +  
Sbjct: 237 -------SISERSG--------------------EAFFIFQRMQQEGERCDRVTFLSILD 269

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC     L   K +   I +     D+ + TAL+ M+ARC  P+ A QVF RM++ ++  
Sbjct: 270 ACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLIT 329

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W+A I A A  G+  +A+  F  M ++GI P+ + F+ +L   +    + +   +   +T
Sbjct: 330 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 389

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA---ACQKHQN 656
           + HG+         +V++ GR     +A  +   + + PN + W S++     C++H +
Sbjct: 390 E-HGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLISWNSMIGIYVQCERHDD 446



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 174/372 (46%), Gaps = 32/372 (8%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY +CG++  A   FG+ + RN+V  N ++S Y      +EALA+   MLL G  P+ +T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           +++ +++     +L  G + H   L  G      +   +++MY KCG    A  +F+ M+
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K VV+WN+++              V+S                  Q   ++ A+ELF  
Sbjct: 121 EKNVVTWNAMLG-------------VYS-----------------LQGCCWKLAVELFTR 150

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML E +K + +T + V ++     AL   K+I++ + ++    D+ + TALV+ + +CG 
Sbjct: 151 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 210

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              A +VF  M  R V  W + I A ++     +A  +F  M ++G + D + F+ +L A
Sbjct: 211 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDA 270

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           C +   +  G H+  S+++       +     ++ +  R     +A  +   M  + N +
Sbjct: 271 CVNPETLQHGKHVRESISET-SFELDLFVGTALITMYARCRSPEDAAQVFGRMK-QTNLI 328

Query: 643 IWGSLLAACQKH 654
            W +++ A   H
Sbjct: 329 TWSAIITAFADH 340



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 197/432 (45%), Gaps = 17/432 (3%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L EL + H  I + GL    +  + +V      G  ES   A+  FD     N     L 
Sbjct: 378 LEELSRIHLLITEHGLDDTTTMRNALVNV---YGRCESPDDARTVFDQLELPN-----LI 429

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +NS+I  Y       +A+ L+  +   GI PD+  F  +L ACT  S       VH  +
Sbjct: 430 SWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCV 489

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            + G      V+  L+N Y + G++     +  EM E+ + +W  LI   A     +EA+
Sbjct: 490 EESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREAL 549

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             + ++  E I  + VT + V++AC    +L  G  + +   E G+ ++ ++ NAL +MY
Sbjct: 550 EAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMY 609

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KCG+++ A+++F     R+ V  N ++  Y + G + E L ++ +M   G + + +T +
Sbjct: 610 SKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFV 669

Query: 345 SAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           S +S+ +  G +  G +  H      G+E        ++D+  + GK + A +    M  
Sbjct: 670 SVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPL 729

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEM----PGRDHISWNTMLGGLTQENM-FEEAM 457
              +V+W SL+       D++  +    ++    PG    S + +L  +  E   ++ A 
Sbjct: 730 EPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNS--SASVVLSNIYSERGDWKNAA 787

Query: 458 ELFRVMLSERIK 469
           +L R M S R+K
Sbjct: 788 KLRRAMASRRVK 799



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 3/251 (1%)

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G +  A   F ++  R+ +SWN M+   +    F+EA+ LF  ML E +  + +T+V V 
Sbjct: 6   GSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVL 65

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           ++CG    L     ++A   + G   +  +ATAL++M+ +CG    A  VF  M +++V 
Sbjct: 66  NSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVV 125

Query: 540 AWTAAIGAMAMEG-NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            W A +G  +++G   + AVELF  ML +G+K + I F+ VL +      + +G  +   
Sbjct: 126 TWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSC 185

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           + +    S  +     +V+   + G L +A  +   MP       W S+++A    +   
Sbjct: 186 VRESEH-SLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGT-WNSMISAYSISERSG 243

Query: 659 IAAYAAERITE 669
            A +  +R+ +
Sbjct: 244 EAFFIFQRMQQ 254


>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/615 (39%), Positives = 388/615 (63%), Gaps = 16/615 (2%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKA--NALMVNALVDMYMKCGAVDTAKQLFGEC-- 300
           ++ +CA+  +L++G+R+ A I   G+       + NAL+  Y  CG    A+++F E   
Sbjct: 19  LLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPH 78

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
             ++ V   T+M  +VR  ++ EAL I  EM   G +PD VT++      A+LGD++ G 
Sbjct: 79  SHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGA 138

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             HG +++ GL G +  CN ++DMY K G    A R+F  M  ++VVSW  ++ G+I++ 
Sbjct: 139 QGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSE 198

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVA 479
            V + R VF EMP R+ ++W  M+ G     + +E+  L R M+ +  ++++ VT+  + 
Sbjct: 199 GVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSIL 258

Query: 480 SACGYLGALDLAKWIYAY-IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
           +AC   G L + +W++AY ++      ++ + TA+VDM+A+CG    A + F++M +R+V
Sbjct: 259 TACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNV 318

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W A +  +AM G G  A+++F +M ++  KPD + F  VL+ACSH GLV+QG   F +
Sbjct: 319 VSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLVDQGCFYFGN 377

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           +  ++G++P++ HY CMVDLLGRAG L EA  L++ MP+ PN+V+ GSLL +C  H  + 
Sbjct: 378 LESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQ 437

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +  +  + + +LDP+ +  H+LLSN+YA AGK      +R  +K++GI+K+PG SSI V 
Sbjct: 438 LGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVG 497

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT-------NVLLD--VDEQEK 769
           G+VH+F++GD+SHP    + +ML EM  RLR AGY P+         + L D  V+++EK
Sbjct: 498 GQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVEQEEK 557

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +  L  HSEKLA+ FGLIST   +P+ + KNLR+C DCHS  K+VSK+Y+REI++RD NR
Sbjct: 558 EQALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNR 617

Query: 830 FHFFRQGSCSCSDFW 844
           FH F++GSCSC D+W
Sbjct: 618 FHCFKEGSCSCCDYW 632



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 230/510 (45%), Gaps = 107/510 (20%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFD--RDVFVENCLINFYGECGDIVDGRRVFDE 198
           + F+L +C + S+   G ++H  I+  G     + F+ N L+ FY  CG     R+VFDE
Sbjct: 16  YRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDE 75

Query: 199 M--SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           +  S ++ V WT+L+    R ++  EA+ +F EM   G+KP+ VT+VC+   CA+L ++ 
Sbjct: 76  IPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVV 135

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK--------------- 301
           +G +    + ++G+       NA++DMY K G +  A+++F E K               
Sbjct: 136 VGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVI 195

Query: 302 ----------------DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP-DRVTML 344
                           +RN V    +++ Y+  GL +E+ A++ EM+       + VT+ 
Sbjct: 196 RSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLC 255

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSN 403
           S ++A +Q GDL+ GR  H Y L+   +  + +  T M+DMY KCG+  +A + F  M  
Sbjct: 256 SILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQ 315

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           + VVSWN++++GL  +G   +A ++F +                    MF+EA       
Sbjct: 316 RNVVSWNAMLSGLAMHGLGRAALDIFPQ--------------------MFKEA------- 348

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGD 522
                K D VT   V SAC + G +D   + +  +E   GI   ++    +VD+  R G 
Sbjct: 349 -----KPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGR 403

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            + A  + R M                                   I+P+ +V   +L +
Sbjct: 404 LEEAEILVREMP----------------------------------IRPNEVVLGSLLGS 429

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           CS  G +  G HL + +  +    PQ   Y
Sbjct: 430 CSIHGKLQLGEHLLQELVQL---DPQNTEY 456



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 34/267 (12%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           EA+ ++VE+   G+ PD+ T   +   C +      G Q HG +VKMG        N ++
Sbjct: 101 EALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVM 160

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG------ 234
           + Y + G + + RRVF EM  ++VVSWT ++    R +  +    +F EM E        
Sbjct: 161 DMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTI 220

Query: 235 --------------------------IKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
                                     ++ N VT+  +++AC++  +L +G  V AY  + 
Sbjct: 221 MIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKT 280

Query: 269 GMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
             K   +MV  A+VDMY KCG +  A + F +   RN+V  N ++S     GL R AL I
Sbjct: 281 KEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDI 340

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLG 354
             +M     +PD VT  S +SA +  G
Sbjct: 341 FPQMFKEA-KPDDVTFTSVLSACSHSG 366


>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
          Length = 742

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 248/592 (41%), Positives = 380/592 (64%), Gaps = 2/592 (0%)

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           ++ L D      DE+  K +A++   ++   ++ G +D A++L  +  +RN+V   ++++
Sbjct: 152 SMGLTDDARRAFDEIPAK-DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIA 210

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y R G   +A+   + ML  G  PD V ++ A+SA ++L +L  GR+ H  V +  +  
Sbjct: 211 GYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRM 270

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSN-KTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            D++   +IDMY KCG    A  +FD +   +    WN++I G  K G V+ AR +F +M
Sbjct: 271 TDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQM 330

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             RD I++N+M+ G        +A++LF  M    ++ D  T+V + +AC  LGAL   +
Sbjct: 331 GARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGR 390

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++A IE+  +  D+ L TAL+DM+ +CG    A  VF RM +RDV  WTA I  +A  G
Sbjct: 391 ALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNG 450

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G+ A+E F +M R G +P S+ ++ VLTACSH  L+++G   F  M  +H + PQ+ HY
Sbjct: 451 MGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHY 510

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GCM+DLL R+GLL EA+ L+++MP++PN VIWGS+L+AC+ H+N+D+A +AAE + +L P
Sbjct: 511 GCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAP 570

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           E+  V+V L NIY  + +W +  RVR+ M+E+G++K  G SSI V G+VH+F + D+SHP
Sbjct: 571 EEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHP 630

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
               I +M+ E+ CRL+  GY P  + + +DVDE+EK+  L  HSEK+A+AFGLIS   +
Sbjct: 631 WTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPS 690

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +PI +VKNLR+C DCHS  KLVS++++REIIVRD +RFH FR G+CSC+DFW
Sbjct: 691 LPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 254/602 (42%), Gaps = 106/602 (17%)

Query: 43  KTLNELKQPHCHILKQG-LGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           +++ +  Q H  +   G + H+PS    +      +     L Y    FD         +
Sbjct: 10  RSVRQASQLHALLTTSGRIAHRPSAEHLLSSLTNTISAPRHLRYVLSLFDRL-----PHS 64

Query: 102 TLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV-- 158
           T F++++ +R       G +  + L   +   G+    FTF FV   C   +    G+  
Sbjct: 65  TTFLFDTALRACLQASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCL 124

Query: 159 QVHGAIVKMGFDRDV-FVENCLINFYGECGDIVDGRRVFDEMS----------------- 200
            +H A ++         V N LI+ Y   G   D RR FDE+                  
Sbjct: 125 MLHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRW 184

Query: 201 --------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
                         ERNVVSWTSLI   +R   P +AVY F  M+ +G+ P+ V ++  +
Sbjct: 185 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGAL 244

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC------------------- 287
           SAC+KL+NL+LG  +   + +  ++    +V AL+DMY KC                   
Sbjct: 245 SACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKP 304

Query: 288 -------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
                        G VD A+ LF +   R+++  N++++ Y+  G  R+AL +  +M  H
Sbjct: 305 EPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRH 364

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G R D  T++S ++A A LG L  GR  H  + +  +E    +   ++DMYMKCG+ + A
Sbjct: 365 GMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEA 424

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
             +F  M  + V +W ++IAGL  NG                               M +
Sbjct: 425 TAVFHRMGERDVHTWTAMIAGLAFNG-------------------------------MGK 453

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATAL 513
           +A+E F  M  +  +   VT + V +AC +   LD  +  +  +   + +H  ++    +
Sbjct: 454 DALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCM 513

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           +D+ AR G    AM + + M  + +   W + + A  +  N + A      +L+   + D
Sbjct: 514 IDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEED 573

Query: 573 SI 574
           ++
Sbjct: 574 AV 575



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 37/323 (11%)

Query: 361 MCHGYVLRNGLEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           M H   LR  L      + N +I MY   G  + A R FD +  K  V W ++I GL++ 
Sbjct: 125 MLHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRW 184

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G ++ AR +  + P R+ +SW +++ G ++     +A+  F  MLS+ +  D V ++G  
Sbjct: 185 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGAL 244

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV---------- 529
           SAC  L  LDL + ++  + +  I     L  AL+DM+A+CGD  +A  V          
Sbjct: 245 SACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKP 304

Query: 530 ----------------------FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
                                 F +M  RDV  + + I      G    A++LF +M R 
Sbjct: 305 EPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRH 364

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLGRAGLLG 626
           G++ D+   V +LTAC+  G +  G  L  S+     +  + V+ G  ++D+  + G + 
Sbjct: 365 GMRADNFTVVSLLTACASLGALPHGRALHASIE--QRIVEEDVYLGTALLDMYMKCGRVD 422

Query: 627 EALDLIKSMPVEPNDVIWGSLLA 649
           EA  +   M  E +   W +++A
Sbjct: 423 EATAVFHRMG-ERDVHTWTAMIA 444


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/586 (42%), Positives = 364/586 (62%), Gaps = 31/586 (5%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           ++ A ++F    + N+ + N I+   ++     +A+    +M++   RP++ T  +   A
Sbjct: 80  LNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKA 139

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEG------------------------------WDSIC- 378
                    G   H +V++ GL G                               D IC 
Sbjct: 140 CTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICF 199

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N MID Y+KCG+ E A  +F  M +K V SWN +++G+ K G +E ARE+F+EM  ++ I
Sbjct: 200 NAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEI 259

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SW+ M+ G  +   ++EA+E+F VM  E I+  +  +  V +AC  LGALD  +WI+AY+
Sbjct: 260 SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYV 319

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
             N    D  L TALVDM+A+CG    A  VF +MEK++V  W A I  + M G  E A+
Sbjct: 320 NNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAI 379

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           ELF +M +Q  +P+ I  +GVL+AC+H G+V++G  +F SM +++G+ P + HYGC+VDL
Sbjct: 380 ELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDL 439

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAGLLGEA +++ SMP+EP+  +WG+LL AC+KH +V++     + + EL+P+ SG +
Sbjct: 440 LGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRY 499

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
            LLSNIYA AG+W +VA VR  MKE+G++   G S I+ +G VHEF  GD SHP+M NI 
Sbjct: 500 ALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIY 559

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
            ML+ M  RL+  G+ P+ + VL D++E+EK+  L +HSEKLA+AFGLI+T     I VV
Sbjct: 560 LMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVV 619

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCHS  KL+S+VYDREIIVRD  R+H F+ G+CSC DFW
Sbjct: 620 KNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 214/496 (43%), Gaps = 80/496 (16%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           M+ T N  P  LA+   +T  N+  ++ + K    + + K+  +L+ LKQ H   L+ G 
Sbjct: 1   MSTTTNL-PYHLASKDFST-ENKFTSQLSQKTILDLLNTKSSTSLHHLKQVHAVALRTG- 57

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
             +  Y+S  +  C     F +L +A K F+Y    N     +F++N +I+G        
Sbjct: 58  HFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPN-----VFVFNIIIKGCLQNNEPC 112

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +AI  Y ++      P+KFT+P +  ACT + A  EGVQVH  ++K G   DV + +  I
Sbjct: 113 KAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGI 172

Query: 181 NFYG-------------------------------ECGDIVDGRRVFDEMSERNVVSWTS 209
             YG                               +CG++   + +F  M ++NV SW  
Sbjct: 173 QMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNV 232

Query: 210 LICACARRDLPKEAVYLFFEMVE-------------------------------EGIKPN 238
           ++   A+  + +EA  LF EM E                               E I+P 
Sbjct: 233 MVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPR 292

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
              +  V++ACA L  L+ G  + AY++      +A++  ALVDMY KCG +D A  +F 
Sbjct: 293 KFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFE 352

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL-- 356
           + + + +   N ++      G A +A+ +  +M     RP+ +T+L  +SA A  G +  
Sbjct: 353 KMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDE 412

Query: 357 ---LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSL 412
              +   M   Y +  G+E +  +    +D+  + G    A  +   M    +   W +L
Sbjct: 413 GLRIFNSMEEVYGIEPGMEHYGCV----VDLLGRAGLLGEAEEVMYSMPMEPSAAVWGAL 468

Query: 413 IAGLIKNGDVESAREV 428
           +    K+GDVE    V
Sbjct: 469 LGACRKHGDVELGERV 484


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/724 (35%), Positives = 410/724 (56%), Gaps = 32/724 (4%)

Query: 122  AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
            AI  +V + G  I  D  T   VL A   +     G QVHG  VK G D DV V N L+N
Sbjct: 888  AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 947

Query: 182  FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
             Y + G     R VF++M   +++SW S+I +CA+  L +E+V LF +++ EG+KP+  T
Sbjct: 948  MYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFT 1007

Query: 242  MVCVISACAKL-QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
            +  V+ AC+ L   L +  ++  +  + G  A++ +   L+D+Y K G ++ A+ LF   
Sbjct: 1008 LASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNK 1067

Query: 301  KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
             D +L   N +M  Y+     ++AL +   +   G + D++T+ +A  A   L  L  G+
Sbjct: 1068 DDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGK 1127

Query: 361  MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
              H + ++ G +    + + ++DMY+KCG                               
Sbjct: 1128 QIHAHAIKAGFDSDLHVNSGILDMYIKCG------------------------------- 1156

Query: 421  DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
            D+ +A  VF+ +   D ++W +M+ G       ++A+ ++  M   R+  D  T   +  
Sbjct: 1157 DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIK 1216

Query: 481  ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
            A   + AL+  + ++A + K     D  + T+LVDM+A+CG+ + A ++F++M  R+++ 
Sbjct: 1217 ASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL 1276

Query: 541  WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
            W A +  +A  GN E+AV LF  M   GI+PD + F+G+L+ACSH GL ++ +    SM 
Sbjct: 1277 WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMP 1336

Query: 601  DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            + +G+ P+I HY C+VD LGRAGL+ EA  +I++MP + +  I  +LL AC+   +V+  
Sbjct: 1337 NDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETG 1396

Query: 661  AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
               A R+  L+P  S  +VLLSNIYA+A +W +V   R  MK + ++K PG S I+V   
Sbjct: 1397 KRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNM 1456

Query: 721  VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
            +H F   D SHP+ + I   + EM   +R+ GYVPD   VLLDV+++EK+  L +HSEKL
Sbjct: 1457 LHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKL 1516

Query: 781  AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
            A+A+GLIST  +  IRV+KNLR+C DCH+  K +SKV++REI++RD NRFH FR G CSC
Sbjct: 1517 AIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSC 1576

Query: 841  SDFW 844
             D+W
Sbjct: 1577 GDYW 1580



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 169/661 (25%), Positives = 277/661 (41%), Gaps = 120/661 (18%)

Query: 82   SLTYAQKAFDYYIKDNETSATLFMYNSLIRGY-----SCIGLGVEAISLYVELAGFGILP 136
            SL+ A++ FD           L  +N+++  Y     S  G   E + L+  L       
Sbjct: 671  SLSSARQVFD-----TTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGST 725

Query: 137  DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
             + T   VL  C  S        VHG  +K+G + DVFV   L+N Y +CG + D R +F
Sbjct: 726  TRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLF 785

Query: 197  DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
            D M ER+VV W  ++    +  L KEA  LF E    G++P+  ++  +++  +++   E
Sbjct: 786  DWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDE 845

Query: 257  ---LGDRVCAYIDEL------------------------------------GMKANALMV 277
               L D+V AY  +L                                    G+  +   V
Sbjct: 846  GKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAV 905

Query: 278  NALVDMYMKCGAVD--TAKQLFG----ECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
              LV +    G  D    KQ+ G       D ++ + N++++ Y ++G A  A  + ++M
Sbjct: 906  TLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDM 965

Query: 332  ------------------------------LLH-GPRPDRVTMLSAVSASAQLGD-LLCG 359
                                          LLH G +PD  T+ S + A + L D L   
Sbjct: 966  KHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNIS 1025

Query: 360  RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
            R  H + L+ G      +  T+ID+Y K GK E A  +F +  +  +  WN+++ G I  
Sbjct: 1026 RQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIG 1085

Query: 420  GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
             D + A E+FS                     +  ++ E          K D++T+   A
Sbjct: 1086 NDGKKALELFS---------------------LIHKSGE----------KSDQITLATAA 1114

Query: 480  SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
             ACG L  LD  K I+A+  K G   D+ + + ++DM+ +CGD   A  VF  +   D  
Sbjct: 1115 KACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV 1174

Query: 540  AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
            AWT+ I      GN +QA+ +++ M +  + PD   F  ++ A S    + QG  L  ++
Sbjct: 1175 AWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV 1234

Query: 600  TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
              +  VS   V    +VD+  + G + +A  L K M V  N  +W ++L    +H N + 
Sbjct: 1235 IKLDCVSDPFVGT-SLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEE 1292

Query: 660  A 660
            A
Sbjct: 1293 A 1293



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 259/571 (45%), Gaps = 73/571 (12%)

Query: 160  VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA---- 215
             H  IV  G   D F+ N L+  Y +CG +   R+VFD   ER++V+W +++ A A    
Sbjct: 643  THARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVD 702

Query: 216  -RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
                  +E ++LF  +         +T+  V+  C     L   + V  Y  ++G++ + 
Sbjct: 703  SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 762

Query: 275  LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
             +  ALV++Y KCG +  A+ LF   ++R++VL N ++  YV+LGL +EA  +  E    
Sbjct: 763  FVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRS 822

Query: 335  GPRPDRVTM---------------------LSAVSASAQLGDLLCGRMCHGYVLRNGL-- 371
            G RPD  ++                     + A +A   L D      C    L   L  
Sbjct: 823  GLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWA 882

Query: 372  -EGWDSI--------CNTMIDMY--------------MKCGKQEMACRIFDHMSNKTVVS 408
             + W +I         N   D                ++ GKQ     +   + +   V+
Sbjct: 883  GDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVA 942

Query: 409  WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
             NSL+    K G    AREVF++M   D ISWN+M+    Q ++ EE++ LF  +L E +
Sbjct: 943  -NSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL 1001

Query: 469  KVDRVTMVGVASACGYL-GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
            K D  T+  V  AC  L   L++++ I+ +  K G   D  +AT L+D++++ G  + A 
Sbjct: 1002 KPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAE 1061

Query: 528  QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
             +F+  +  D++ W A +    +  +G++A+ELF+ + + G K D I       AC    
Sbjct: 1062 FLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLV 1121

Query: 588  LVNQGWHLFRSM------TDIH---GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
            L++QG  +          +D+H   G+    +  G MV+    AG++    + I +    
Sbjct: 1122 LLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVN----AGIV---FNYISA---- 1170

Query: 639  PNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            P+DV W S+++ C  + N D A     R+ +
Sbjct: 1171 PDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 1201



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 187/391 (47%), Gaps = 12/391 (3%)

Query: 45   LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
            LN  +Q H H LK G        + ++   ++ G  E   +        +  N+    L 
Sbjct: 1022 LNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEF--------LFQNKDDLDLA 1073

Query: 105  MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
             +N+++ GY     G +A+ L+  +   G   D+ T      AC       +G Q+H   
Sbjct: 1074 CWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHA 1133

Query: 165  VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            +K GFD D+ V + +++ Y +CGD+V+   VF+ +S  + V+WTS+I  C       +A+
Sbjct: 1134 IKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQAL 1193

Query: 225  YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             ++  M +  + P+  T   +I A + +  LE G ++ A + +L   ++  +  +LVDMY
Sbjct: 1194 RIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMY 1253

Query: 285  MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
             KCG ++ A +LF +   RN+ L N ++    + G A EA+ +   M  HG  PDRV+ +
Sbjct: 1254 AKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFI 1313

Query: 345  SAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
              +SA +  G L      + + + N  G+E      + ++D   + G  + A ++ + M 
Sbjct: 1314 GILSACSHAG-LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP 1372

Query: 403  NKTVVSWNSLIAGLIK-NGDVESAREVFSEM 432
             K   S N  + G  +  GDVE+ + V + +
Sbjct: 1373 FKASASINRALLGACRIQGDVETGKRVAARL 1403



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 172/383 (44%), Gaps = 52/383 (13%)

Query: 253  QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             NL LG    A I   G   +  + N L+ MY KCG++ +A+Q+F    +R+LV  N I+
Sbjct: 635  HNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAIL 694

Query: 313  SNYV-----RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
              Y        G A+E L +   +        R+T+   +      G L      HGY +
Sbjct: 695  GAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 754

Query: 368  RNGLEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
            + GLE WD  +   ++++Y KCG+   A  +FD M  + VV WN ++ G ++ G  + A 
Sbjct: 755  KIGLE-WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAF 813

Query: 427  EVFSEMPGR----DHISWNTMLGGLTQENMFE---------------------------- 454
            ++FSE        D  S   +L G+++ N  E                            
Sbjct: 814  QLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWN 873

Query: 455  -------------EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                          A+E F  M    I  D VT++ V +A      L+L K ++    K+
Sbjct: 874  KKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKS 933

Query: 502  GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            G+  D+ +A +LV+M+++ G    A +VF  M+  D+ +W + I + A     E++V LF
Sbjct: 934  GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLF 993

Query: 562  NEMLRQGIKPDSIVFVGVLTACS 584
             ++L +G+KPD      VL ACS
Sbjct: 994  IDLLHEGLKPDHFTLASVLRACS 1016


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 277/808 (34%), Positives = 448/808 (55%), Gaps = 68/808 (8%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
            + +L+Q H H++   L     ++S ++  C ++       +A  A+   I  +  S   
Sbjct: 13  NIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRL-------HAHPAYVDSIFTSSPSPDA 65

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
            +Y+ +++ YS +G   + +SL+       + P  F + +++    KS     G   H  
Sbjct: 66  SVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKS-----GNMFHAY 120

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K+G   D F+ N +++ Y + G +   R +F++M+ER +  W S+I  C +     EA
Sbjct: 121 VLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEA 180

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           V LF  M                                          N +   ++V  
Sbjct: 181 VVLFNMMPAR---------------------------------------NIITWTSMVTG 201

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y K G +++A++ F E  +R++V  N + S Y +    +EAL +  +ML  G  PD  T 
Sbjct: 202 YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTW 261

Query: 344 LSAVSASAQLGDLLCG----RMC-HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +  +S+ + +GD        RM    +++ N       +   ++DM+ K G  E+A  IF
Sbjct: 262 VVTISSCSSIGDPTLADSILRMIDQKHIVLNSF-----VKTALLDMHAKFGNLEIARNIF 316

Query: 399 DHM-SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           D + S +  V+WN +I+   + G +  ARE+F  MP RD +SWN+M+ G  Q      ++
Sbjct: 317 DELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSI 376

Query: 458 ELFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           ELF+ M+S   I+ D VT+  V SACG++GAL L+ W+   + +  I   +    +L+ M
Sbjct: 377 ELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFM 436

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +++CG    A ++F+ M  RDV ++   I   A  G+G++A++L   M  +GI+PD + +
Sbjct: 437 YSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTY 496

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVLTACSH GL+N+G ++F+S+      +P + HY CMVDLLGRAG L EA  LI+SMP
Sbjct: 497 IGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMP 551

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           ++P+  ++GSLL A + H+ V +   AA ++ EL+P+  G +VLLSNIYAS G+W +V R
Sbjct: 552 MKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKR 611

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR  MK+ G++K  G S +E  G+VH+FT GD SH +  +I  +L E+  +++  G+V D
Sbjct: 612 VREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVAD 671

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
            +  L DV+E+EK+ +L  HSEKLA+ F L+ +     IRVVKNLR+C DCH+  K++SK
Sbjct: 672 KSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISK 731

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  REI+VRDNNRFH F +G CSC D+W
Sbjct: 732 LEGREIVVRDNNRFHCFSEGMCSCHDYW 759


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/621 (42%), Positives = 379/621 (61%), Gaps = 37/621 (5%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDT---AKQLFGECKDRNLVLCNTIMSNYV 316
           ++ A I +  +  N  ++  L+     C + +    A+ +F E    +  + NT++  Y+
Sbjct: 21  QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80

Query: 317 RLGLAREALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
                +E++++  +M      P D  ++   + A  +L D   G+  H  VL+ GL G D
Sbjct: 81  NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGL-GSD 139

Query: 376 SICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
               T +I+MY K G  E+A  I D M++  +V +N L+A  ++ G++  A ++F  MP 
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE 199

Query: 435 RDHISWNTMLGGL-------TQENMFE------------------------EAMELFRVM 463
           RD +SWNTM+ G        T + +F+                        EA+ LF  M
Sbjct: 200 RDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM 259

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
               +  D+VTMV V SACG +GAL + K I+  IE+N I  D++L T+LVDM+A+CGD 
Sbjct: 260 QLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDI 319

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             +++VF  M  RDV AW+A I  +A  G GE A++ F++M+ + IKP+ + F+GVL+AC
Sbjct: 320 DNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSAC 379

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SH GLV++GW  F SM+ ++ VSP+I HYGC+VD+LGRAG L EA++LIKSMP  P+ ++
Sbjct: 380 SHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIV 439

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           W +LL AC+ ++NV+IA  A   + EL+P   G +VLLSNIY+ A +W  V  VR  MK 
Sbjct: 440 WRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKN 499

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
             I+K+PGSSSIEV+  VHEF +GD+SHPE   I  ML E+  RL+  GY P   +VL D
Sbjct: 500 INIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQD 559

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
            DE+EK+  L+HHSEKLA+AFGL+ST+    IR+VKNLR+C DCH   KL+S+ Y R II
Sbjct: 560 FDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRII 619

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD NRFH F  GSCSC D+W
Sbjct: 620 VRDRNRFHHFVNGSCSCKDYW 640



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 209/462 (45%), Gaps = 55/462 (11%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG---DIVDGRRVFDEMS 200
           V++    ++   + +Q+H  I+K   D + FV   L+     C    D++  R VFDE+ 
Sbjct: 6   VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGD 259
             +   W ++I A      P+E++ LFF+M  +E I  +S ++  VI AC +L++   G 
Sbjct: 66  SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++   + ++G+ ++  +  AL++MY K G ++ A+ +  E    +LV  N +++ YVR+G
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVG 185

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
               A  + D M    P  D V+  + +   A LGD+   +          L  W S   
Sbjct: 186 EINLAHDLFDRM----PERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSS--- 238

Query: 380 TMIDMYMKCGKQEMACRIFDHMS-------NKTVVS------------------------ 408
            MI  Y K  +   A R+F  M          T+VS                        
Sbjct: 239 -MIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN 297

Query: 409 --------WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
                     SL+    K GD++++  VF+ M  RD  +W+ M+ GL      E A++ F
Sbjct: 298 RIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHF 357

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY--AYIEKNGIHCDMQLATALVDMFA 518
             M+SE IK + VT +GV SAC ++G +D   W Y  +  +   +   ++    +VD+  
Sbjct: 358 SKMISEDIKPNDVTFIGVLSACSHIGLVD-EGWTYFTSMSKVYDVSPKIEHYGCVVDILG 416

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVE 559
           R G  Q AM++ + M    D   W A +GA  +  N E A E
Sbjct: 417 RAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEE 458



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/501 (22%), Positives = 208/501 (41%), Gaps = 85/501 (16%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+N   LN++ Q H  I+K  L      ++K++       +   L YA+  FD       
Sbjct: 10  LQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEI----- 64

Query: 99  TSATLFMYNSLIRGY-------------------SCIGLGVEAISLYVELAG-------- 131
            S   F++N++IR Y                    CI +   ++SL ++  G        
Sbjct: 65  PSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNG 124

Query: 132 ---------FGILPDKFTFPFVLNACTK----------------------SSAFGEGVQV 160
                     G+  D F    ++    K                      +    E V+V
Sbjct: 125 QKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRV 184

Query: 161 ------HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
                 H    +M  +RD+   N +I+ +   GD+   +++FD   ER+++SW+S+I A 
Sbjct: 185 GEINLAHDLFDRMP-ERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAY 243

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A+     EA+ LF EM    + P+ VTMV V+SAC  +  L +G  +   I+   ++ + 
Sbjct: 244 AKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDL 303

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            +  +LVDMY KCG +D + ++F    +R++   + ++      G    AL    +M+  
Sbjct: 304 KLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISE 363

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
             +P+ VT +  +SA + +G +  G      M   Y +   +E +  +    +D+  + G
Sbjct: 364 DIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCV----VDILGRAG 419

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESARE-VFSEMPGRDHISWNTMLGGL 447
           + + A  +   M      + W +L+       +VE A E   + +    H+  N +L   
Sbjct: 420 RLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVL--- 476

Query: 448 TQENMFEEAMELFRVMLSERI 468
              N++ +A E  +V+   R+
Sbjct: 477 -LSNIYSQAKEWDKVVNVRRM 496


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/808 (34%), Positives = 448/808 (55%), Gaps = 68/808 (8%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
            + +L+Q H H++   L     ++S ++  C ++       +A  A+   I  +  S   
Sbjct: 13  NIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRL-------HAHPAYVDSIFTSSPSPDA 65

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
            +Y+ +++ YS +G   + +SL+       + P  F + +++    KS     G   H  
Sbjct: 66  SVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKS-----GNLFHAY 120

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K+G   D F+ N +++ Y + G +   R +F++M+ER +  W S+I  C +     EA
Sbjct: 121 VLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEA 180

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           V LF  M                                          N +   ++V  
Sbjct: 181 VVLFNMMPAR---------------------------------------NIITWTSMVTG 201

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y K G +++A++ F E  +R++V  N + S Y +    +EAL +  +ML  G  PD  T 
Sbjct: 202 YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTW 261

Query: 344 LSAVSASAQLGDLLCG----RMC-HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +  +S+ + +GD        RM    +++ N       +   ++DM+ K G  E+A  IF
Sbjct: 262 VVTISSCSSIGDPTLADSILRMIDQKHIVLNSF-----VKTALLDMHAKFGNLEIARNIF 316

Query: 399 DHM-SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           D + S +  V+WN +I+   + G +  ARE+F  MP RD +SWN+M+ G  Q      ++
Sbjct: 317 DELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSI 376

Query: 458 ELFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           ELF+ M+S   I+ D VT+  V SACG++GAL L+ W+   + +  I   +    +L+ M
Sbjct: 377 ELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFM 436

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +++CG    A ++F+ M  RDV ++   I   A  G+G++A++L   M  +GI+PD + +
Sbjct: 437 YSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTY 496

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVLTACSH GL+N+G ++F+S+      +P + HY CMVDLLGRAG L EA  LI+SMP
Sbjct: 497 IGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMP 551

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           ++P+  ++GSLL A + H+ V +   AA ++ EL+P+  G +VLLSNIYAS G+W +V R
Sbjct: 552 MKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKR 611

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR  MK+ G++K  G S +E  G+VH+FT GD SH +  +I  +L E+  +++  G+V D
Sbjct: 612 VREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVAD 671

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
            +  L DV+E+EK+ +L  HSEKLA+ F L+ +     IRVVKNLR+C DCH+  K++SK
Sbjct: 672 KSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISK 731

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  REI+VRDNNRFH F +G CSC D+W
Sbjct: 732 LEGREIVVRDNNRFHCFSEGMCSCHDYW 759


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/619 (41%), Positives = 379/619 (61%), Gaps = 10/619 (1%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG--AVDT 292
            KP ++T+  + +      NL+  +R+ + +   G  ++    + L+          +D 
Sbjct: 23  FKP-TITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDY 81

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           + Q+F   ++ N  + NT+M  Y++   A +AL +   M+ +   PD  T    V A A 
Sbjct: 82  SLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAV 141

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
                 G+  H +VL+ G +    + NT+I+MY  CG    A ++FD       VSWNS+
Sbjct: 142 RLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSI 201

Query: 413 IAGLIKNGD---VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           +AG +K GD   V  A ++F+EM  +D +SW+ ++ G  Q  M+EEA+ +F  M +  ++
Sbjct: 202 LAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 261

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV----DMFARCGDPQR 525
           +D V +V V SAC +L  +   K I+  + + GI   + L  AL+    DM+ +CG  + 
Sbjct: 262 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVEN 321

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A++VF  ME++ VS+W A I  +A+ G  E+++++F+EM   G+ P+ I F+GVL AC H
Sbjct: 322 ALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRH 381

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV++G   F SM + HG+ P + HYGCMVDLLGRAGLL EA  LI+SMP+ P+   WG
Sbjct: 382 MGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWG 441

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC+KH + ++      ++ EL P+  G HVLLSNI+AS G W +V  VR  MK+QG
Sbjct: 442 ALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 501

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           + K PG S IE NG VHEF +GD++HP +N +  ML EM  RL+  GY PD   V LD+D
Sbjct: 502 VVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDID 561

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+EK+  L  HSEKLA+AFGL++ S   PIR++KNLR+C DCH+ AKL+SK Y REI+VR
Sbjct: 562 EEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVR 621

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D +RFH+F++G+CSC D+W
Sbjct: 622 DRHRFHYFKEGACSCMDYW 640



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 213/452 (47%), Gaps = 52/452 (11%)

Query: 21  TNQHKAKTTPKDSPSI--GSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMG 78
           T  HK    P  + SI    L NC  L +  +    ++  G     ++ +  +   +   
Sbjct: 16  TFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGF-ISDTFAASRLLKFSTDS 74

Query: 79  TFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
            F  L Y+ + FD     N      FM+N+++R Y       +A+ LY  +    + PD 
Sbjct: 75  PFIGLDYSLQIFDRIENSNG-----FMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDN 129

Query: 139 FTFPFVLNAC-TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
           +T+P V+ AC  +   FG G ++H  ++K+GFD DV+V+N LIN Y  CG++ D R++FD
Sbjct: 130 YTYPLVVQACAVRLLEFG-GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFD 188

Query: 198 ----------------------------------EMSERNVVSWTSLICACARRDLPKEA 223
                                             EM E+++VSW++LI    +  + +EA
Sbjct: 189 ESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEA 248

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV-- 281
           + +F EM   G++ + V +V V+SACA L  ++ G  +   +  +G+++   + NAL+  
Sbjct: 249 LVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHM 308

Query: 282 --DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
             DMYMKCG V+ A ++F   +++ +   N ++      GL   +L +  EM  +G  P+
Sbjct: 309 YSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPN 368

Query: 340 RVTMLSAVSASAQLGDLLCGRMCH--GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            +T +  + A   +G +  GR CH    + ++G+E        M+D+  + G    A ++
Sbjct: 369 EITFMGVLGACRHMGLVDEGR-CHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKL 427

Query: 398 FDHMS-NKTVVSWNSLIAGLIKNGDVESAREV 428
            + M     V +W +L+    K+GD E    V
Sbjct: 428 IESMPMAPDVATWGALLGACKKHGDTEMGERV 459


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/735 (35%), Positives = 413/735 (56%), Gaps = 35/735 (4%)

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
           GY   G  VEA  L+  +   G    +FT   VL  C+       G  +HG +VK GF+ 
Sbjct: 136 GYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEG 195

Query: 172 DVFVENCLINFYGECGDIVDGRRVFD--EMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           +VFV   L++ Y +C  + +   +F   E   +N V WT+++   A+     +AV  F  
Sbjct: 196 NVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRY 255

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M  +G++ N  T   +++AC+ +     G++V  +I + G  +N  + +ALVDMY KCG 
Sbjct: 256 MHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGD 315

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +  AK +    +D ++V  N++M  +VR GL  EAL +   M     + D  T  S ++ 
Sbjct: 316 LKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNC 375

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
              +G +   +  HG +++ G E +  + N ++DMY K                      
Sbjct: 376 CV-VGSI-NPKSVHGLIIKTGFENYKLVSNALVDMYAK---------------------- 411

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                     GD++ A  VF +M  +D ISW +++ G  Q N  EE++++F  M    + 
Sbjct: 412 ---------TGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 462

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D+  +  + SAC  L  L+  K ++    K+G+     +  +LV M+A+CG    A  +
Sbjct: 463 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 522

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M+ +DV  WTA I   A  G G  +++ ++ M+  G +PD I F+G+L ACSH GLV
Sbjct: 523 FVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLV 582

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++G   F+ M  ++G+ P   HY CM+DL GR+G L EA  L+  M V+P+  +W SLL+
Sbjct: 583 DEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLS 642

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC+ H+N+++A  AA  + EL+P  +  +V+LSN+Y+++ KW +VA++R  MK +GI K 
Sbjct: 643 ACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKE 702

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S +E+N +V+ F S D  HP    I + + E+  R+++AGYVPD++  L D+D++ K
Sbjct: 703 PGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGK 762

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +  L++HSEKLA+AFGL++   + PIR+ KNLR+C DCHS  K +S+V+ R II+RD+N 
Sbjct: 763 EVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNC 822

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR+G CSC D+W
Sbjct: 823 FHHFREGECSCGDYW 837



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 143/290 (49%), Gaps = 28/290 (9%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N +++   K G+   A ++FD M  K   SWN++I+  +  G +  ARE+F     +  I
Sbjct: 69  NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +W++++ G  +     EA +LFR M  E  K  + T+  V   C  LG +   + I+ ++
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME--KRDVSAWTAAIGAMAMEGNGEQ 556
            KNG   ++ + T LVDM+A+C     A  +F+ +E  +++   WTA +   A  G+G +
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 248

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWHLFRSMTDIHGV 605
           AVE F  M  QG++ +   F  +LTACS           HG +V  G+            
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGF------------ 296

Query: 606 SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKH 654
              +     +VD+  + G L  A +++++M  E +DV+ W SL+    +H
Sbjct: 297 GSNVYVQSALVDMYAKCGDLKNAKNMLETM--EDDDVVSWNSLMVGFVRH 344



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 15/188 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF-DYYIKDNETSATLFMYN 107
           KQ H   +K GL    S  + +V   A+ G  +    A   F    +KD      +  + 
Sbjct: 485 KQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDD---ADAIFVSMQVKD------VITWT 535

Query: 108 SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
           ++I GY+  G G  ++  Y  +   G  PD  TF  +L AC+ +    EG +    + K+
Sbjct: 536 AIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKV 595

Query: 168 -GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICAC---ARRDLPKE 222
            G         C+I+ +G  G + + +++ D+M  + +   W SL+ AC      +L + 
Sbjct: 596 YGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAER 655

Query: 223 AVYLFFEM 230
           A    FE+
Sbjct: 656 AATNLFEL 663


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/686 (37%), Positives = 389/686 (56%), Gaps = 32/686 (4%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           QV+  ++  G  +  F+    IN     GD+    + F E+SE +++ W ++I    +++
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           +    + ++ +M    + PN  T + V+ AC       +G ++     + G  +N  + N
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +LV MY K G +  A+ +F +  DR +V   +I+S YV+ G   EAL +  EM     +P
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D + ++S ++A   + DL  G+  HG V + GLE    I  ++  MY K           
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAK----------- 233

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                G VE AR  F+ M   + I WN M+ G       EEA++
Sbjct: 234 --------------------RGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIK 273

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LFR M+++ I+VD +TM     A   +G+L+LA+W+  YI K+    D  + T L+DM+A
Sbjct: 274 LFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 333

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A  VF R+  +DV  W+  I    + G+G++A+ L+NEM + G+ P+   F+G
Sbjct: 334 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 393

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +LTAC + GLV +GW LF  M D HG+ P   HY C+VDLLGRAG L +A D I SMP++
Sbjct: 394 LLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 452

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P   +WG+LL+AC+ H+ V +   AAE++  LDP  +G +V LSN+YASA  WT VA VR
Sbjct: 453 PGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVR 512

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
           L M ++G+ K  G SSIE+NG +  F  GD SHP+   I   L  +  RL+ AGYVP + 
Sbjct: 513 LMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHME 572

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
           +VL D++ +E +  L HHSE+LA+A+G+IST+    +R+ KNLR C +CHS  KL+SK+ 
Sbjct: 573 SVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLV 632

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
           DREII+RD  RFH F+ G CSC DFW
Sbjct: 633 DREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 248/504 (49%), Gaps = 44/504 (8%)

Query: 47  ELKQPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
            L Q +  ++  GL HK  ++  K +  C   G    + YA KAF        +   + +
Sbjct: 2   HLDQVYVQLIVSGL-HKCRFLMIKFINACLHFG---DVNYAHKAFR-----EVSEPDILL 52

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I+GY+   +    I +Y+++    + P+ FTF +VL AC  +S  G G Q+HG   
Sbjct: 53  WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 112

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K GF  +VFV+N L++ Y + G I   R VFD++ +R VVSWTS+I    +   P EA+ 
Sbjct: 113 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 172

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F EM +  +KP+ + +V V++A   +++L  G  +   + +LG++    +V +L  MY 
Sbjct: 173 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA 232

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G V+ A+  F   +  NL+L N ++S Y   G   EA+ +  EM+    R D +TM S
Sbjct: 233 KRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRS 292

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNK 404
           AV ASAQ+G L   R   GY+ ++     D+  NT +IDMY KCG   +A  +FD +++K
Sbjct: 293 AVLASAQVGSLELARWLDGYISKSEYRD-DTFVNTGLIDMYAKCGSIYLARCVFDRVADK 351

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VV W+ +I G   +G                                 +EA+ L+  M 
Sbjct: 352 DVVLWSVMIMGYGLHGHG-------------------------------QEAICLYNEMK 380

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              +  +  T +G+ +AC   G +     ++  +  +GI    Q  + +VD+  R G   
Sbjct: 381 QAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLN 440

Query: 525 RAMQVFRRME-KRDVSAWTAAIGA 547
           +A      M  K  VS W A + A
Sbjct: 441 QAYDFIMSMPIKPGVSVWGALLSA 464


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/686 (37%), Positives = 393/686 (57%), Gaps = 32/686 (4%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+H  +V  G   + F+   L+N     G I   R++FDE    +V  W ++I + +R +
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           + ++ V ++  M   G+ P+  T   V+ AC +L +  L   +   I + G  ++  + N
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            LV +Y KCG +  AK +F     R +V   +I+S Y + G A EAL +  +M  +G +P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D + ++S + A   + DL  GR  HG+V++ GLE   ++  ++   Y KCG         
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGL-------- 305

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                  V  A+  F +M   + I WN M+ G  +    EEA+ 
Sbjct: 306 -----------------------VTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVN 342

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF  M+S  IK D VT+     A   +G+L+LA+W+  Y+ K+    D+ + T+L+DM+A
Sbjct: 343 LFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYA 402

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG  + A +VF R   +DV  W+A I    + G G +A+ L++ M + G+ P+ + F+G
Sbjct: 403 KCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIG 462

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +LTAC+H GLV +GW LF  M D   + P+  HY C+VDLLGRAG LGEA   I  +P+E
Sbjct: 463 LLTACNHSGLVKEGWELFHCMKDFE-IVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIE 521

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P   +WG+LL+AC+ ++ V +  YAA ++  LDP  +G +V LSN+YAS+  W  VA VR
Sbjct: 522 PGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVR 581

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
           + M+E+G+ K  G S IE+NGK+  F  GD+SHP    I   L+ +  RL++ G+VP   
Sbjct: 582 VLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTE 641

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
           +VL D++ +EK+  LS HSE++A+A+GLIST+    +R+ KNLR C +CHS  KL+SK+ 
Sbjct: 642 SVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLV 701

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
           +REIIVRD NRFH F+ G CSC D+W
Sbjct: 702 EREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 160/518 (30%), Positives = 259/518 (50%), Gaps = 42/518 (8%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           DS     + N      L Q H  ++  GL H    ++K+V   + +G    + YA+K FD
Sbjct: 56  DSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLG---QICYARKLFD 112

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
            +   +     +FM+N++IR YS   +  + + +Y  +   G+ PD FTFP+VL ACT+ 
Sbjct: 113 EFCYPD-----VFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTEL 167

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
             FG    +HG I+K GF  DVFV+N L+  Y +CG I   + VFD +  R +VSWTS+I
Sbjct: 168 LDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSII 227

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
              A+     EA+ +F +M   G+KP+ + +V ++ A   + +LE G  +  ++ ++G++
Sbjct: 228 SGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLE 287

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
               ++ +L   Y KCG V  AK  F + K  N+++ N ++S Y + G A EA+ +   M
Sbjct: 288 DEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYM 347

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGK 390
           +    +PD VT+ SAV ASAQ+G L   +    YV ++   G D   NT +IDMY KCG 
Sbjct: 348 ISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNY-GSDIFVNTSLIDMYAKCGS 406

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A R+FD  S+K VV W+++I G   +G                   W          
Sbjct: 407 VEFARRVFDRNSDKDVVMWSAMIMGYGLHGQ-----------------GW---------- 439

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
               EA+ L+ VM    +  + VT +G+ +AC + G +     ++  ++   I    +  
Sbjct: 440 ----EAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHY 495

Query: 511 TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
           + +VD+  R G    A     ++  +  VS W A + A
Sbjct: 496 SCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/694 (37%), Positives = 385/694 (55%), Gaps = 63/694 (9%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y     + D  R+F+ +     ++W S+I       LP +++  F  M+  G+ P+    
Sbjct: 50  YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK-------------CGA 289
             V+ +CA L +L LG+ +  YI  +G+  +    NAL++MY K              G 
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169

Query: 290 V-------------------DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           V                   D+ +++F    +++LV  NTI++   R GL  E L ++ E
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M     +PD  T+ S +   A+  D+  G+  HG  +R GL+    + +++IDMY KC +
Sbjct: 230 MGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTR 289

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              +CR+F  ++                                RD ISWN+++ G  Q 
Sbjct: 290 VADSCRVFTLLTE-------------------------------RDGISWNSIIAGCVQN 318

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
            +F+E +  FR ML  +IK    +   +  AC +L  L L K ++ YI +NG   ++ +A
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 378

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           ++LVDM+A+CG+ + A Q+F RM  RD+ +WTA I   A+ G    A+ELF +M  +GIK
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK 438

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           P+ + F+ VLTACSHGGLV++ W  F SMT   G++P + HY  + DLLGRAG L EA D
Sbjct: 439 PNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYD 498

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            I  M + P   IW +LL+AC+ H N+D+A   A RI E+DP  +G ++LL+NIY++A +
Sbjct: 499 FICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARR 558

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W   A+ R  M+  GIRK P  S IEV  KV+ F +GDESHP    I   +  +   +  
Sbjct: 559 WKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEK 618

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            GYVPD + V  DV+E++KKYL+  HSE+LA+ FG+I+T   M IRV KNLR+C DCH+ 
Sbjct: 619 EGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTA 678

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +SK+  REI+VRDN+RFH F+ G+CSC D+W
Sbjct: 679 TKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 224/494 (45%), Gaps = 65/494 (13%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + S+IR Y+  GL  +++  ++ +   G+ PD   FP VL +C        G  +HG I+
Sbjct: 74  WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYII 133

Query: 166 KMGFDRDVFVENCLINFYGE-------------CGDIVDG-------------------R 193
           ++G D D++  N L+N Y +              G++ D                    R
Sbjct: 134 RVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVR 193

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           ++F+ M E+++VSW ++I   AR  L +E + +  EM    +KP+S T+  V+   A+  
Sbjct: 194 KIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENV 253

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           ++  G  +       G+ A+  + ++L+DMY KC  V  + ++F    +R+ +  N+I++
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
             V+ GL  E L    +ML+   +P   +  S + A A L  L  G+  HGY+ RNG + 
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 373

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              I ++++DMY KCG    A +IFD M  + +VSW ++I G   +G    A        
Sbjct: 374 NIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDA-------- 425

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-K 492
                                  +ELF  M +E IK + V  + V +AC + G +D A K
Sbjct: 426 -----------------------IELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWK 462

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV-SAWTAAIGAMAME 551
           +  +     GI   ++   A+ D+  R G  + A      M      S W   + A  + 
Sbjct: 463 YFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVH 522

Query: 552 GNGEQAVELFNEML 565
            N + A ++ N +L
Sbjct: 523 XNIDMAEKVANRIL 536



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 136/252 (53%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +N++I G +  GL  E + +  E+ G  + PD FT   VL    ++     G ++HG
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHG 263

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             ++ G D D++V + LI+ Y +C  + D  RVF  ++ER+ +SW S+I  C +  L  E
Sbjct: 264 CSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDE 323

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            +  F +M+   IKP S +   ++ ACA L  L LG ++  YI   G   N  + ++LVD
Sbjct: 324 GLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVD 383

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG + TAKQ+F   + R++V    ++      G A +A+ + ++M   G +P+ V 
Sbjct: 384 MYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVA 443

Query: 343 MLSAVSASAQLG 354
            ++ ++A +  G
Sbjct: 444 FMAVLTACSHGG 455


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/686 (37%), Positives = 389/686 (56%), Gaps = 32/686 (4%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           QV+  ++  G  +  F+    IN     GD+    + F E+SE +++ W ++I    +++
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           +    + ++ +M    + PN  T + V+ AC       +G ++     + G  +N  + N
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +LV MY K G +  A+ +F +  DR +V   +I+S YV+ G   EAL +  EM     +P
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 199

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D + ++S ++A   + DL  G+  HG V + GLE    I  ++  MY K           
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAK----------- 248

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                G VE AR  F+ M   + I WN M+ G       EEA++
Sbjct: 249 --------------------RGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIK 288

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LFR M+++ I+VD +TM     A   +G+L+LA+W+  YI K+    D  + T L+DM+A
Sbjct: 289 LFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 348

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A  VF R+  +DV  W+  I    + G+G++A+ L+NEM + G+ P+   F+G
Sbjct: 349 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 408

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +LTAC + GLV +GW LF  M D HG+ P   HY C+VDLLGRAG L +A D I SMP++
Sbjct: 409 LLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 467

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P   +WG+LL+AC+ H+ V +   AAE++  LDP  +G +V LSN+YASA  WT VA VR
Sbjct: 468 PGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVR 527

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
           L M ++G+ K  G SSIE+NG +  F  GD SHP+   I   L  +  RL+ AGYVP + 
Sbjct: 528 LMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHME 587

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
           +VL D++ +E +  L HHSE+LA+A+G+IST+    +R+ KNLR C +CHS  KL+SK+ 
Sbjct: 588 SVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLV 647

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
           DREII+RD  RFH F+ G CSC DFW
Sbjct: 648 DREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/506 (30%), Positives = 249/506 (49%), Gaps = 44/506 (8%)

Query: 45  LNELKQPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           L  L Q +  ++  GL HK  ++  K +  C   G    + YA KAF        +   +
Sbjct: 15  LKHLDQVYVQLIVSGL-HKCRFLMIKFINACLHFG---DVNYAHKAFR-----EVSEPDI 65

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
            ++N++I+GY+   +    I +Y+++    + P+ FTF +VL AC  +S  G G Q+HG 
Sbjct: 66  LLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQ 125

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
             K GF  +VFV+N L++ Y + G I   R VFD++ +R VVSWTS+I    +   P EA
Sbjct: 126 TFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEA 185

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + +F EM +  +KP+ + +V V++A   +++L  G  +   + +LG++    +V +L  M
Sbjct: 186 LNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM 245

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y K G V+ A+  F   +  NL+L N ++S Y   G   EA+ +  EM+    R D +TM
Sbjct: 246 YAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITM 305

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMS 402
            SAV ASAQ+G L   R   GY+ ++     D+  NT +IDMY KCG   +A  +FD ++
Sbjct: 306 RSAVLASAQVGSLELARWLDGYISKSEYRD-DTFVNTGLIDMYAKCGSIYLARCVFDRVA 364

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           +K VV W+ +I G   +G                                 +EA+ L+  
Sbjct: 365 DKDVVLWSVMIMGYGLHGHG-------------------------------QEAICLYNE 393

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           M    +  +  T +G+ +AC   G +     ++  +  +GI    Q  + +VD+  R G 
Sbjct: 394 MKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGY 453

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGA 547
             +A      M  K  VS W A + A
Sbjct: 454 LNQAYDFIMSMPIKPGVSVWGALLSA 479


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/759 (33%), Positives = 416/759 (54%), Gaps = 35/759 (4%)

Query: 86   AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
            A++ FD  +  ++ S     + +++ GY+  G  VE + L+ ++    +  +K +     
Sbjct: 282  ARRVFDQMVDQDDVS-----WGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336

Query: 146  NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
             A  ++    +G ++HG  ++   D D+ V   L+  Y +CG+    +++F  +  R++V
Sbjct: 337  LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396

Query: 206  SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
            +W+++I A  +   P+EA+ LF EM  + +KPN VT++ ++ ACA L  L+LG  +  + 
Sbjct: 397  AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456

Query: 266  DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
             +  M ++     ALV MY KCG    A   F     R++V  N++++ Y ++G    A+
Sbjct: 457  VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAI 516

Query: 326  AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
             +  ++ L    PD  TM+  V A A L DL  G   HG +++ G E    + N +IDMY
Sbjct: 517  DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576

Query: 386  MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
             KCG    A  +F    NKT  +                          +D ++WN ++ 
Sbjct: 577  AKCGSLPSAEFLF----NKTDFT--------------------------KDEVTWNVIIA 606

Query: 446  GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
               Q    +EA+  F  M  E    + VT V V  A  YL A       +A I + G   
Sbjct: 607  AYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS 666

Query: 506  DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
            +  +  +L+DM+A+CG    + ++F  M+ +D  +W A +   A+ G+G++A+ LF+ M 
Sbjct: 667  NTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 726

Query: 566  RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
               ++ DS+ FV VL+AC H GLV +G  +F SM+D + + P + HY CMVDLLGRAGL 
Sbjct: 727  ESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLF 786

Query: 626  GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
             E L  IK MPVEP+  +WG+LL +C+ H NV +   A + + +L+P      V+LS+IY
Sbjct: 787  DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 846

Query: 686  ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
            A +G+W +  + R +M + G++K PG S +E+  KVH F  GD+SHP++ ++  +   + 
Sbjct: 847  AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLL 906

Query: 746  CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             ++   GYVPD + VL +V+E++K+  L  HSE+LA+ F L++T     I++VKNLR+C 
Sbjct: 907  EKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCA 966

Query: 806  DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH+  K +SK+  R IIVRD  RFH F  G CSC+D+W
Sbjct: 967  DCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 200/662 (30%), Positives = 332/662 (50%), Gaps = 64/662 (9%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L +CK LN L Q H  I+  G  H  S I+ ++        F     A+  FD     + 
Sbjct: 39  LSSCKHLNPLLQIHAQIIVSGFKHHHS-ITHLI---NLYSLFHKCDLARSVFD-----ST 89

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            + +  ++NS+IR Y+      EA+ +Y  +   G+ PDK+TF FVL ACT +    EGV
Sbjct: 90  PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
             HG I + G +RDVF+   L++ Y + GD+   R VFD+M +R+VV+W ++I   ++ +
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
            P EAV  F  M   G++P+SV+++ +     KL N+EL   +  Y+       ++ + N
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV--FRRDFSSAVSN 267

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            L+D+Y KCG VD A+++F +  D++ V   T+M+ Y   G   E L + D+M L   R 
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           ++V+ +SA  A+A+  DL  G+  HG  L+  ++    +   ++ MY KCG+ E A ++F
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             +  + +V+W+++IA L++ G  E                               EA+ 
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPE-------------------------------EALS 416

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF+ M ++++K +RVT++ +  AC  L  L L K I+ +  K  +  D+   TALV M+A
Sbjct: 417 LFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYA 476

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A+  F RM  RD+  W + I   A  G+   A+++F ++    I PD+   VG
Sbjct: 477 KCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVG 536

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG---------CMVDLLGRAGLLGEAL 629
           V+ AC+    ++QG       T IHG+   IV  G          ++D+  + G L  A 
Sbjct: 537 VVPACALLNDLDQG-------TCIHGL---IVKLGFESDCHVKNALIDMYAKCGSLPSAE 586

Query: 630 DLIKSMPVEPNDVIWGSLLAACQK--HQNVDIAAYAAERITELDPEK-SGVHVLLSNIYA 686
            L        ++V W  ++AA  +  H    I+++   R+    P   + V VL +  Y 
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYL 646

Query: 687 SA 688
           +A
Sbjct: 647 AA 648


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/693 (36%), Positives = 398/693 (57%), Gaps = 7/693 (1%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARR 217
           ++H  I+ +G    V     LI  Y    D      VF   S   NV  W S+I A    
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            L  EA+ L+ E     ++P++ T   VI+ACA L + E+   +   + ++G  ++  + 
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM------ 331
           NAL+DMY +   +D A+++F E   R++V  N+++S Y   G   EAL I  +       
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
           +++  +PD +T+ S + A   LGDL  G+  H Y++ +G E   +  N +I+MY KCG  
Sbjct: 214 MVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 273

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             +  +F  M  K  VSWNS+I   I+NG +  + +VF  M  RD I+WNT++       
Sbjct: 274 LASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSE 333

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
                + +   M +E +  D  TM+ +   C  L A    K I+  I K G+  D+ +  
Sbjct: 334 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 393

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
            L++M+++CG  + + QVF+ M+ +DV  WTA I A  M G G++AV  F EM   GI P
Sbjct: 394 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 453

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D + FV ++ ACSH GLV +G + F  M   + + P+I HY C+VDLL R+ LL +A D 
Sbjct: 454 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 513

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I SMP++P+  IWG+LL+AC+   + +IA   +ERI EL+P+ +G +VL+SNIYA+ GKW
Sbjct: 514 ILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKW 573

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             V  +R  +K +G++K PG S +E+  KV+ F +G +   +   ++ +L  +   +   
Sbjct: 574 DQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKE 633

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           GY+ +L  VL D+DE EK+ +L  HSE+LA+AFGL++T    P++V+KNLR+C DCH+  
Sbjct: 634 GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVT 693

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K +SK+  RE++VRD NRFH F+ G+CSC D+W
Sbjct: 694 KYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 257/581 (44%), Gaps = 57/581 (9%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L +  T  +L + H  I+  GL H   + +K++   A+   F   T +   F    +  
Sbjct: 22  ALASAATTTQLHKLHSLIITLGLHHSVIFSAKLI---AKYAHFRDPTSSFSVF----RLA 74

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
             S  ++++NS+IR  +  GL  EA+SLY E     + PD +TFP V+NAC     F   
Sbjct: 75  SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             +H  ++ MGF  D+++ N LI+ Y    D+   R+VF+EM  R+VVSW SLI      
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194

Query: 218 DLPKEA-------VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
               EA       + LF EMV +  KP+ +T+  ++ AC  L +LE G  V  Y+   G 
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 253

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFG--ECKD-------------------------- 302
           + +    N L++MY KCG +  ++++F   +CKD                          
Sbjct: 254 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFEN 313

Query: 303 ---RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              R+++  NTI+++ V        L ++  M   G  PD  TMLS +   + L     G
Sbjct: 314 MKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 373

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           +  HG + + GLE    + N +I+MY KCG    + ++F  M  K VV+W +LI+     
Sbjct: 374 KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMY 433

Query: 420 GDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
           G+ + A   F EM       DH+++  ++   +   + EE +  F  M  +     R+  
Sbjct: 434 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 493

Query: 476 VG-VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR-- 532
              V         LD A+    +I    +  D  +  AL+      GD + A +V  R  
Sbjct: 494 YACVVDLLSRSALLDKAE---DFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERII 550

Query: 533 -MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
            +   D   +       A  G  +Q   +   +  +G+K D
Sbjct: 551 ELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKD 591


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/751 (35%), Positives = 423/751 (56%), Gaps = 46/751 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +++++  Y   G  ++AI ++VE    G++P+ + +  V+ AC+ S   G G    G ++
Sbjct: 134 WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193

Query: 166 KMG-FDRDVFVENCLINFY--GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
           K G F+ DV V   LI+ +  GE     +  +VFD+MSE NVV+WT +I  C +   P+E
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGE-NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+  F +MV  G + +  T+  V SACA+L+NL LG ++ ++    G+  +     +LVD
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVD 310

Query: 283 MYMKC---GAVDTAKQLFGECKDRNLVLCNTIMSNYVR-LGLAREALAILDEMLLHGP-R 337
           MY KC   G+VD  +++F   +D +++    +++ Y++   LA EA+ +  EM+  G   
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           P+  T  SA  A   L D   G+   G   + GL    S+ N++I M++K  +       
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR------- 423

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                   +E A+  F  +  ++ +S+NT L G  +   FE+A 
Sbjct: 424 ------------------------MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           +L   +    + V   T   + S    +G++   + I++ + K G+ C+  +  AL+ M+
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           ++CG    A +VF  ME R+V +WT+ I   A  G   + +E FN+M+ +G+KP+ + +V
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            +L+ACSH GLV++GW  F SM + H + P++ HY CMVDLL RAGLL +A + I +MP 
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           + + ++W + L AC+ H N ++   AA +I ELDP +   ++ LSNIYA AGKW     +
Sbjct: 640 QADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEM 699

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R +MKE+ + K  G S IEV  K+H+F  GD +HP  + I   L  +   ++  GYVPD 
Sbjct: 700 RRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDT 759

Query: 758 TNVLLDVDEQEKKY----LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
             VL  ++E+  +     LL  HSEK+A+AFGLISTSK+ P+RV KNLR+C DCH+  K 
Sbjct: 760 DLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKY 819

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +S V  REI++RD NRFH F+ G CSC+D+W
Sbjct: 820 ISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 228/509 (44%), Gaps = 50/509 (9%)

Query: 59  GLGHKPSYISKVVCT-CAQMGTF----ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGY 113
           G   K  +    VC  C+ +  F     S   A K FD   + N  + TL +   +  G+
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249

Query: 114 SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDV 173
                  EAI  ++++   G   DKFT   V +AC +      G Q+H   ++ G   D 
Sbjct: 250 P-----REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD- 303

Query: 174 FVENCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARR-DLPKEAVYLFFE 229
            VE  L++ Y +C   G + D R+VFD M + +V+SWT+LI    +  +L  EA+ LF E
Sbjct: 304 -VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362

Query: 230 MVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           M+ +G ++PN  T      AC  L +  +G +V     + G+ +N+ + N+++ M++K  
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            ++ A++ F    ++NLV  NT +    R     +A  +L E+          T  S +S
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
             A +G +  G   H  V++ GL     +CN +I MY KCG  + A R+F+ M N+ V+S
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W S+I G  K+G                                    +E F  M+ E +
Sbjct: 543 WTSMITGFAKHG-------------------------------FAIRVLETFNQMIEEGV 571

Query: 469 KVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           K + VT V + SAC ++G +    +   +  E + I   M+    +VD+  R G    A 
Sbjct: 572 KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAF 631

Query: 528 QVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +    M  + DV  W   +GA  +  N E
Sbjct: 632 EFINTMPFQADVLVWRTFLGACRVHSNTE 660



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/543 (23%), Positives = 254/543 (46%), Gaps = 44/543 (8%)

Query: 122 AISLYVELAGFGILP-DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           A+S    +A  GI P D  TF  +L +C ++  F  G  VH  +++   + D  + N LI
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104

Query: 181 NFYGECGDIVDGRRVFDEM---SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
           + Y + GD      VF+ M    +R+VVSW++++          +A+ +F E +E G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN-ALVDMYMKC-GAVDTAKQ 295
           N      VI AC+    + +G     ++ + G   + + V  +L+DM++K   + + A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F +  + N+V    +++  +++G  REA+    +M+L G   D+ T+ S  SA A+L +
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC---GKQEMACRIFDHMSNKTVVSWNSL 412
           L  G+  H + +R+GL   D +  +++DMY KC   G  +   ++FD M + +V+SW +L
Sbjct: 285 LSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVD 471
           I G +KN                               N+  EA+ LF  M+++  ++ +
Sbjct: 343 ITGYMKNC------------------------------NLATEAINLFSEMITQGHVEPN 372

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
             T      ACG L    + K +     K G+  +  +A +++ MF +    + A + F 
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            + ++++ ++   +       N EQA +L +E+  + +   +  F  +L+  ++ G + +
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
           G  +   +  + G+S        ++ +  + G +  A  +   M    N + W S++   
Sbjct: 493 GEQIHSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGF 550

Query: 652 QKH 654
            KH
Sbjct: 551 AKH 553



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 177/437 (40%), Gaps = 57/437 (13%)

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRMCHGY 365
           + + ++  ++  G  R A++ LD M   G RP D VT  S + +  +  D   G++ H  
Sbjct: 28  VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           ++   +E  DS+                               +NSLI+   K+GD   A
Sbjct: 88  LIEFDIEP-DSVL------------------------------YNSLISLYSKSGDSAKA 116

Query: 426 REVFSEMP---GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
            +VF  M     RD +SW+ M+          +A+++F   L   +  +      V  AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176

Query: 483 GYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDP-QRAMQVFRRMEKRDVSA 540
                + + +    ++ K G    D+ +  +L+DMF +  +  + A +VF +M + +V  
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-----WHL 595
           WT  I      G   +A+  F +M+  G + D      V +AC+    ++ G     W +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP-VEPNDVI-WGSLLAACQK 653
              + D    S        +VD+  +    G   D  K    +E + V+ W +L+    K
Sbjct: 297 RSGLVDDVECS--------LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348

Query: 654 HQNVDIAAYA--AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
           + N+   A    +E IT+   E +  H   S+ + + G  ++  RV  Q+  Q  ++   
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPN--HFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLA 405

Query: 712 SSSIEVNGKVHEFTSGD 728
           S+S   N  +  F   D
Sbjct: 406 SNSSVANSVISMFVKSD 422


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 268/757 (35%), Positives = 415/757 (54%), Gaps = 77/757 (10%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + S+IR Y+  GL  +++  ++ +   G+ PD   FP VL AC        G  +HG I+
Sbjct: 76  WKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYII 135

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRR-------VFDEMSER--NVVSWTSLICACAR 216
           ++G D D++  N L+N Y +   +    R       V DEM+ER  +V + + L+    R
Sbjct: 136 RVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGR 195

Query: 217 R---------DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
           +         D+   +     +++E   KP S           +++   LG ++      
Sbjct: 196 KVSDIEAFNYDVSCRSREFEAQVLEIDYKPRS--------EYREMEACNLGQQIKDISHS 247

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
           +                    +VD+ +++F    +++LV  NTI++   R GL  E L +
Sbjct: 248 M--------------------SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTM 287

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           + EM     +PD  T+ S +   A+  D+  G+  HG  +R GL+    + +++IDMY K
Sbjct: 288 VREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAK 347

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           C       R+ D                         +  VF+ +  RD ISWN+++ G 
Sbjct: 348 C------TRVVD-------------------------SYRVFTLLTERDGISWNSIIAGC 376

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
            Q  +F+E ++ FR ML  +IK    +   +  AC +L  L L K ++ YI +NG   ++
Sbjct: 377 VQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENI 436

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            +A++LVDM+A+CG+ + A Q+F RM  RD+ +WTA I   A+ G+   A+ELF +M  +
Sbjct: 437 FIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTE 496

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           GI+P+ + F+ VLTACSH GLV++ W  F SMT   G++P + HY  + DLLGRAG L E
Sbjct: 497 GIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEE 556

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A D I  MP+ P   +W +LL+AC+ H+NVD+A   A RI E+DP+ +G ++LL+NIY++
Sbjct: 557 AYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSA 616

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
           A +W   A+ R  ++  GIRK P  S IEV  KV+ F +GDESHP    I   +  +   
Sbjct: 617 ARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMEL 676

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +   GYVPD + V  DV+E++KKYL+  HSE+LA+ FG+I+T     IRV KNLR+C DC
Sbjct: 677 MEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDC 736

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H+  K +SK+  REI+VRDN+RFH F+ G+CSC D+W
Sbjct: 737 HTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 138/252 (54%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +N++I G +  GL  E +++  E+ G  + PD FT   VL    ++    +G ++HG
Sbjct: 265 LVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHG 324

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             ++ G D +V+V + LI+ Y +C  +VD  RVF  ++ER+ +SW S+I  C +  L  E
Sbjct: 325 CSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDE 384

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            +  F +M+   IKP S +   ++ ACA L  L LG ++  YI   G   N  + ++LVD
Sbjct: 385 GLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVD 444

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG + TA+Q+F   + R++V    ++      G A +A+ + ++M   G  P+ V 
Sbjct: 445 MYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVA 504

Query: 343 MLSAVSASAQLG 354
            ++ ++A +  G
Sbjct: 505 FMAVLTACSHAG 516



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 31/249 (12%)

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           ++W +++   T   +  +++  F  ML+  +  D      V  AC  L  L+L + ++ Y
Sbjct: 74  LAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGY 133

Query: 498 IEKNGIHCDMQLATALVDMFARC-----GDPQR--AMQVFRRMEKRDVSAWTAAIGAMAM 550
           I + G+  D+    AL++M+++         QR  A QV   M +R  S  TA++  +  
Sbjct: 134 IIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASV-LVGN 192

Query: 551 EGNGEQAVELFN------------EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR- 597
           +G     +E FN            ++L    KP S      + AC+ G  +    H    
Sbjct: 193 QGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRS--EYREMEACNLGQQIKDISHSMSV 250

Query: 598 -SMTDIHGVSPQ--IVHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAAC 651
            S+  I  + P+  +V +  ++    R GL GE L +++ M    ++P+     S+L   
Sbjct: 251 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLI 310

Query: 652 QKHQNVDIA 660
              +NVDI+
Sbjct: 311 A--ENVDIS 317


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/761 (36%), Positives = 421/761 (55%), Gaps = 39/761 (5%)

Query: 86  AQKAFD-YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
           A+K FD  Y++++  S     +NS+I  YS  G+  EA+ L+ E+   G++ + +TF   
Sbjct: 112 ARKLFDRMYVRNDVVS-----WNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAA 166

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L AC  SS    G+Q+H AI+K G   DV+V N L+  Y   G + +   +F  +  +++
Sbjct: 167 LQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDI 226

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           V+W S++    +  L  EA+  F+++    +KP+ V+++ +I A  +L  L  G  + AY
Sbjct: 227 VTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAY 286

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
             + G  +N L+ N L+DMY KC  +    + F     ++L+   T  + Y +     +A
Sbjct: 287 AIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQA 346

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +L ++ + G   D   + S + A   L  L   +  HGY +R GL     + NT+ID+
Sbjct: 347 LELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSD-PVLQNTIIDV 405

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y +CG  + A RIF+ +  K                               D +SW +M+
Sbjct: 406 YGECGIIDYAVRIFESIECK-------------------------------DVVSWTSMI 434

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
                  +  +A+E+F  M    ++ D VT+V + SA   L  L   K I+ +I + G  
Sbjct: 435 SCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFI 494

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            +  ++  LVDM+ARCG  + A ++F   + R++  WTA I A  M G GE AVELF  M
Sbjct: 495 LEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRM 554

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
             + I PD I F+ +L ACSH GLVN+G      M   + + P   HY C+VDLLGR   
Sbjct: 555 KDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNC 614

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA  ++KSM  EP   +W +LL AC+ H N +I   AAE++ ELD +  G +VL+SN+
Sbjct: 615 LEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNV 674

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           +A+ G+W +V  VR++MK  G+ K PG S IEV  K+H F S D+ HPE + I   L ++
Sbjct: 675 FAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQV 734

Query: 745 NCRL-RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
             +L R+ GYV     VL +V E+EK  +L  HSE+LA+A+GL++T++  PIRV KNLR+
Sbjct: 735 TEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRV 794

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCHSF  LVS+ ++RE+IVRD +RFH F+ G CSC DFW
Sbjct: 795 CGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 167/573 (29%), Positives = 288/573 (50%), Gaps = 57/573 (9%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D  +  ++F +N+++ GY   G  + A+ +Y E+   G+  D +TFP +L AC     
Sbjct: 14  IFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVED 73

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN-VVSWTSLIC 212
              G ++HG  +K G D  VFV N L+  Y +C DI   R++FD M  RN VVSW S+I 
Sbjct: 74  LFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIIS 133

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
           A +   +  EA+ LF EM++ G+  N+ T    + AC     ++LG ++ A I + G   
Sbjct: 134 AYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVL 193

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +  + NALV MY++ G +  A  +FG  + +++V  N++++ +++ GL  EAL    ++ 
Sbjct: 194 DVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQ 253

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               +PD+V+++S + AS +LG LL G+  H Y ++NG +    + NT+IDMY KC    
Sbjct: 254 NADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMS 313

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
              R FD M++K ++SW +  AG  +N                                 
Sbjct: 314 YGGRAFDLMAHKDLISWTTAAAGYAQN-------------------------------KC 342

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           + +A+EL R +  E + VD   +  +  AC  L  L   K I+ Y  + G+  D  L   
Sbjct: 343 YLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNT 401

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           ++D++  CG    A+++F  +E +DV +WT+ I      G   +A+E+F+ M   G++PD
Sbjct: 402 IIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPD 461

Query: 573 SIVFVGVLTA-CS----------HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
            +  V +L+A CS          HG ++ +G+ L  S+++             +VD+  R
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNT------------LVDMYAR 509

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            G + +A  +        N ++W ++++A   H
Sbjct: 510 CGSVEDAYKIFTCTK-NRNLILWTAMISAYGMH 541



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 246/511 (48%), Gaps = 49/511 (9%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           YG+CG ++D   +FD+MSER++ +W +++           A+ ++ EM   G+  +S T 
Sbjct: 2   YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
             ++ AC  +++L  G  +     + G  +   +VN+LV +Y KC  ++ A++LF     
Sbjct: 62  PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121

Query: 303 RN-LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           RN +V  N+I+S Y   G+  EAL +  EML  G   +  T  +A+ A      +  G  
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H  +L++G      + N ++ MY++ GK   A  IF ++  K +V+WNS++ G I+NG 
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG- 240

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
                                         ++ EA+E F  + +  +K D+V+++ +  A
Sbjct: 241 ------------------------------LYSEALEFFYDLQNADLKPDQVSIISIIVA 270

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
            G LG L   K I+AY  KNG   ++ +   L+DM+A+C       + F  M  +D+ +W
Sbjct: 271 SGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISW 330

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           T A    A      QA+EL  ++  +G+  D+ +   +L AC       +G +    + +
Sbjct: 331 TTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLAC-------RGLNCLGKIKE 383

Query: 602 IHGVS-----PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ- 655
           IHG +        V    ++D+ G  G++  A+ + +S  +E  DV+  + + +C  H  
Sbjct: 384 IHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFES--IECKDVVSWTSMISCYVHNG 441

Query: 656 --NVDIAAYAAERITELDPEKSGVHVLLSNI 684
             N  +  +++ + T L+P+   +  +LS +
Sbjct: 442 LANKALEVFSSMKETGLEPDYVTLVSILSAV 472



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 255/566 (45%), Gaps = 58/566 (10%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYIS 68
           + T  +   +   KA           +L+ C+  + +K   Q H  ILK G        +
Sbjct: 140 MCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVAN 199

Query: 69  KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVE 128
            +V    + G               I  N     +  +NS++ G+   GL  EA+  + +
Sbjct: 200 ALVAMYVRFGKMPEAAV--------IFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYD 251

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           L    + PD+ +   ++ A  +      G ++H   +K GFD ++ V N LI+ Y +C  
Sbjct: 252 LQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCC 311

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           +  G R FD M+ ++++SWT+     A+     +A+ L  ++  EG+  ++  +  ++ A
Sbjct: 312 MSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLA 371

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C  L  L     +  Y    G+ ++ ++ N ++D+Y +CG +D A ++F   + +++V  
Sbjct: 372 CRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSW 430

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
            +++S YV  GLA +AL +   M   G  PD VT++S +SA   L  L  G+  HG+++R
Sbjct: 431 TSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIR 490

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
            G     SI NT++DMY +CG  E A +IF    N+ ++ W ++I+    +G  E+A E+
Sbjct: 491 KGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVEL 550

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           F  M                                 E+I  D +T + +  AC + G +
Sbjct: 551 FMRMK-------------------------------DEKIIPDHITFLALLYACSHSGLV 579

Query: 489 DLAKWIYAYIEKNGIHCDMQLA------TALVDMFARCGDPQRAMQVFRRMEKRDV-SAW 541
           +  K   +++E   + C+ QL       T LVD+  R    + A Q+ + M+       W
Sbjct: 580 NEGK---SFLEI--MKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVW 634

Query: 542 TAAIGAMAMEGN---GEQAVELFNEM 564
            A +GA  +  N   GE A E   E+
Sbjct: 635 CALLGACRIHSNKEIGEVAAEKLLEL 660



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 170/404 (42%), Gaps = 65/404 (16%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG+V  A+ +F +  +R++   N +M  YV  G A  AL +  EM   G   D  T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
               + A   + DL CG   HG  ++ G + +  + N+++ +Y KC     A ++FD M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 403 NKT-VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
            +  VVSWNS+I+    NG                               M  EA+ LF 
Sbjct: 121 VRNDVVSWNSIISAYSGNG-------------------------------MCTEALCLFS 149

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            ML   +  +  T      AC     + L   I+A I K+G   D+ +A ALV M+ R G
Sbjct: 150 EMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFG 209

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
               A  +F  +E +D+  W + +      G   +A+E F ++    +KPD +  + ++ 
Sbjct: 210 KMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIV 269

Query: 582 ACSHGGLVNQGWHLF---------------RSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           A    G +  G  +                 ++ D++     + + G   DL+    L+ 
Sbjct: 270 ASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLIS 329

Query: 627 ---------------EALDLIKSMPVEPNDV---IWGSLLAACQ 652
                          +AL+L++ + +E  DV   + GS+L AC+
Sbjct: 330 WTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACR 373


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/744 (34%), Positives = 419/744 (56%), Gaps = 44/744 (5%)

Query: 145 LNACTKSS--AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR---RVFDEM 199
           L+ C  SS  +  +  Q H  I+++    D  +   L++FY     +   +    +   +
Sbjct: 5   LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
               + S++SLI A AR       +  F  +    + P++  +   I +CA L+ L+ G 
Sbjct: 65  PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ A+    G   ++++ ++L  MY+KC  +  A++LF    DR++V+ + +++ Y RLG
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184

Query: 320 LAREALAILDEM-----------------------------------LLHGPRPDRVTML 344
           L  EA  +  EM                                   L+ G  PD  T+ 
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
             + A   L D++ G   HGYV++ GL     + + M+DMY KCG  +   R+FD +   
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELF 460
            + S N+ + GL +NG V++A EVF++   +    + ++W +++   +Q     EA+ELF
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELF 364

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
           R M +  ++ + VT+  +  ACG + AL   K I+ +  + GI  D+ + +AL+DM+A+C
Sbjct: 365 RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKC 424

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           G  Q A + F +M   ++ +W A +   AM G  ++ +E+F+ ML+ G KPD + F  VL
Sbjct: 425 GRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVL 484

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
           +AC+  GL  +GW  + SM++ HG+ P++ HY C+V LL R G L EA  +IK MP EP+
Sbjct: 485 SACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPD 544

Query: 641 DVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQ 700
             +WG+LL++C+ H N+ +   AAE++  L+P   G ++LLSNIYAS G W    R+R  
Sbjct: 545 ACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREV 604

Query: 701 MKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNV 760
           MK +G+RK PG S IEV  KVH   +GD+SHP+M +I   L ++N +++ +GY+P    V
Sbjct: 605 MKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFV 664

Query: 761 LLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDR 820
           L DV+EQ+K+ +L  HSEKLA+  GL++TS   P++V+KNLR+C DCH+  K++S++  R
Sbjct: 665 LQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGR 724

Query: 821 EIIVRDNNRFHFFRQGSCSCSDFW 844
           EI VRD NRFH F+ G CSC DFW
Sbjct: 725 EIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/591 (25%), Positives = 256/591 (43%), Gaps = 111/591 (18%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +L++ +Q H  IL+  L       + ++   A      +L+ +       +  +    TL
Sbjct: 15  SLSQARQAHALILRLNLFSDTQLTTSLLSFYAN-----ALSLSTPQLSLTLSSHLPHPTL 69

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F ++SLI  ++        ++ +  L    ++PD F  P  + +C    A   G Q+H  
Sbjct: 70  FSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAF 129

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
               GF  D  V + L + Y +C  I+D R++FD M +R+VV W+++I   +R  L +EA
Sbjct: 130 AAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEA 189

Query: 224 VYLFFEMVEEGIKPNSV-----------------------------------TMVCVISA 248
             LF EM   G++PN V                                   T+ CV+ A
Sbjct: 190 KELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPA 249

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA------------------- 289
              L+++ +G +V  Y+ + G+ ++  +V+A++DMY KCG                    
Sbjct: 250 VGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSL 309

Query: 290 ------------VDTAKQLFGECKDR----NLVLCNTIMSNYVRLGLAREALAILDEMLL 333
                       VDTA ++F + KD+    N+V   +I+++  + G   EAL +  +M  
Sbjct: 310 NAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQA 369

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           +G  P+ VT+ S + A   +  L+ G+  H + LR G+     + + +IDMY KCG+ ++
Sbjct: 370 YGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQL 429

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A R FD MS   +VSWN+++ G   +G                                 
Sbjct: 430 ARRCFDKMSALNLVSWNAVMKGYAMHGKA------------------------------- 458

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATA 512
           +E ME+F +ML    K D VT   V SAC   G  +     Y  + E++GI   M+    
Sbjct: 459 KETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYAC 518

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
           LV + +R G  + A  + + M  + D   W A + +  +  N   GE A E
Sbjct: 519 LVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAE 569



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 165/358 (46%), Gaps = 45/358 (12%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV-----CTCA------------- 75
           P++G L++        Q H +++KQGLG     +S ++     C C              
Sbjct: 248 PAVGCLEDVVVG---AQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304

Query: 76  QMGTFES----------LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
           ++G+  +          +  A + F+ + KD +    +  + S+I   S  G  +EA+ L
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKF-KDQKMELNVVTWTSIIASCSQNGKDLEALEL 363

Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           + ++  +G+ P+  T P ++ AC   SA   G ++H   ++ G   DV+V + LI+ Y +
Sbjct: 364 FRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAK 423

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
           CG I   RR FD+MS  N+VSW +++   A     KE + +F  M++ G KP+ VT  CV
Sbjct: 424 CGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCV 483

Query: 246 ISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR- 303
           +SACA+    E G R    + +E G++        LV +  + G ++ A  +  E     
Sbjct: 484 LSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEP 543

Query: 304 -----NLVLCNTIMSNYVRLG-LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
                  +L +  + N + LG +A E L  L+        P    +LS + AS  L D
Sbjct: 544 DACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPT-----NPGNYILLSNIYASKGLWD 596


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/759 (33%), Positives = 416/759 (54%), Gaps = 35/759 (4%)

Query: 86   AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
            A++ FD  +  ++ S     + +++ GY+  G  VE + L+ ++    +  +K +     
Sbjct: 282  ARRVFDQMVDQDDVS-----WGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336

Query: 146  NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
             A  ++    +G ++HG  ++   D D+ V   L+  Y +CG+    +++F  +  R++V
Sbjct: 337  LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396

Query: 206  SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
            +W+++I A  +   P+EA+ LF EM  + +KPN VT++ ++ ACA L  L+LG  +  + 
Sbjct: 397  AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456

Query: 266  DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
             +  M ++     ALV MY KCG    A   F     R++V  N++++ Y ++G    A+
Sbjct: 457  VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAI 516

Query: 326  AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
             +  ++ L    PD  TM+  V A A L DL  G   HG +++ G E    + N +IDMY
Sbjct: 517  DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576

Query: 386  MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
             KCG    A  +F    NKT  +                          +D ++WN ++ 
Sbjct: 577  AKCGSLPSAEFLF----NKTDFT--------------------------KDEVTWNVIIA 606

Query: 446  GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
               Q    +EA+  F  M  E    + VT V V  A  YL A       +A I + G   
Sbjct: 607  AYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS 666

Query: 506  DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
            +  +  +L+DM+A+CG    + ++F  M+ +D  +W A +   A+ G+G++A+ LF+ M 
Sbjct: 667  NTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 726

Query: 566  RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
               ++ DS+ FV VL+AC H GLV +G  +F SM+D + + P + HY CMVDLLGRAGL 
Sbjct: 727  ESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLF 786

Query: 626  GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
             E L  IK MPVEP+  +WG+LL +C+ H NV +   A + + +L+P      V+LS+IY
Sbjct: 787  DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 846

Query: 686  ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
            A +G+W +  + R +M + G++K PG S +E+  KVH F  GD+SHP++ ++  +   + 
Sbjct: 847  AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLL 906

Query: 746  CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             ++   GYVPD + VL +V+E++K+  L  HSE+LA+ F L++T     I++VKNLR+C 
Sbjct: 907  EKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCA 966

Query: 806  DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH+  K +SK+  R IIVRD  RFH F  G CSC+D+W
Sbjct: 967  DCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 200/662 (30%), Positives = 332/662 (50%), Gaps = 64/662 (9%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L +CK LN L Q H  I+  G  H  S I+ ++        F     A+  FD     + 
Sbjct: 39  LSSCKHLNPLLQIHAQIIVSGFKHHHS-ITHLI---NLYSLFHKCDLARSVFD-----ST 89

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            + +  ++NS+IR Y+      EA+ +Y  +   G+ PDK+TF FVL ACT +    EGV
Sbjct: 90  PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
             HG I + G +RDVF+   L++ Y + GD+   R VFD+M +R+VV+W ++I   ++ +
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
            P EAV  F  M   G++P+SV+++ +     KL N+EL   +  Y+       ++ + N
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV--FRRDFSSAVSN 267

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            L+D+Y KCG VD A+++F +  D++ V   T+M+ Y   G   E L + D+M L   R 
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           ++V+ +SA  A+A+  DL  G+  HG  L+  ++    +   ++ MY KCG+ E A ++F
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             +  + +V+W+++IA L++ G  E                               EA+ 
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPE-------------------------------EALS 416

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF+ M ++++K +RVT++ +  AC  L  L L K I+ +  K  +  D+   TALV M+A
Sbjct: 417 LFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYA 476

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A+  F RM  RD+  W + I   A  G+   A+++F ++    I PD+   VG
Sbjct: 477 KCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVG 536

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG---------CMVDLLGRAGLLGEAL 629
           V+ AC+    ++QG       T IHG+   IV  G          ++D+  + G L  A 
Sbjct: 537 VVPACALLNDLDQG-------TCIHGL---IVKLGFESDCHVKNALIDMYAKCGSLPSAE 586

Query: 630 DLIKSMPVEPNDVIWGSLLAACQK--HQNVDIAAYAAERITELDPEK-SGVHVLLSNIYA 686
            L        ++V W  ++AA  +  H    I+++   R+    P   + V VL +  Y 
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYL 646

Query: 687 SA 688
           +A
Sbjct: 647 AA 648


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 274/819 (33%), Positives = 429/819 (52%), Gaps = 44/819 (5%)

Query: 29   TPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
            TP    S+  L  CK +  L+   Q H  +LK G        + +V     +G   +L  
Sbjct: 247  TPYAFSSV--LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG---NLIS 301

Query: 86   AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
            A+  F      N +      YN+LI G S  G G +A+ L+  +   G+ PD  T   ++
Sbjct: 302  AEHIFS-----NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 356

Query: 146  NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
             AC+       G Q+H    K+GF  +  +E  L+N Y +C DI      F E    NVV
Sbjct: 357  VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 416

Query: 206  SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
             W  ++ A    D  + +  +F +M  E I PN  T   ++  C +L +LELG+++ + I
Sbjct: 417  LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 476

Query: 266  DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
             +   + NA + + L+DMY K G +DTA  +      +++V   T+++ Y +     +AL
Sbjct: 477  IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 536

Query: 326  AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
                +ML  G R D V + +AVSA A L  L  G+  H     +G        N ++ +Y
Sbjct: 537  TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 596

Query: 386  MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
             +CGK                               +E +   F +    D+I+WN ++ 
Sbjct: 597  SRCGK-------------------------------IEESYLAFEQTEAGDNIAWNALVS 625

Query: 446  GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
            G  Q    EEA+ +F  M  E I  +  T      A      +   K ++A I K G   
Sbjct: 626  GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 685

Query: 506  DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
            + ++  AL+ M+A+CG    A + F  +  ++  +W A I A +  G G +A++ F++M+
Sbjct: 686  ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 745

Query: 566  RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
               ++P+ +  VGVL+ACSH GLV++G   F SM   +G+SP+  HY C+VD+L RAGLL
Sbjct: 746  HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 805

Query: 626  GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
              A + I+ MP++P+ ++W +LL+AC  H+N++I  +AA  + EL+PE S  +VLLSN+Y
Sbjct: 806  SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 865

Query: 686  ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
            A + KW      R +MKE+G++K PG S IEV   +H F  GD++HP  + I    +++ 
Sbjct: 866  AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 925

Query: 746  CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             R  + GYV D  ++L ++  ++K  ++  HSEKLA++FGL+S   T+PI V+KNLR+C 
Sbjct: 926  KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 985

Query: 806  DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH++ K VSKV +REIIVRD  RFH F  G+CSC D+W
Sbjct: 986  DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 173/631 (27%), Positives = 300/631 (47%), Gaps = 47/631 (7%)

Query: 29  TPKDSPSIGSLKNCK----TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
           TP +    G L+ C+      + ++Q H  IL QGL       + ++   ++ G  +   
Sbjct: 143 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVD--- 199

Query: 85  YAQKAFD-YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
            A++ FD   +KD+ +      + ++I G S      EAI L+ ++   GI+P  + F  
Sbjct: 200 LARRVFDGLRLKDHSS------WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 253

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL+AC K  +   G Q+HG ++K+GF  D +V N L++ Y   G+++    +F  MS+R+
Sbjct: 254 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
            V++ +LI   ++    ++A+ LF  M  +G++P+S T+  ++ AC+    L  G ++ A
Sbjct: 314 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y  +LG  +N  +  AL+++Y KC  ++TA   F E +  N+VL N ++  Y  L   R 
Sbjct: 374 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 433

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           +  I  +M +    P++ T  S +    +LGDL  G   H  +++   +    +C+ +ID
Sbjct: 434 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 493

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY K GK + A  I    + K VVSW ++IA                             
Sbjct: 494 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIA----------------------------- 524

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
             G TQ N  ++A+  FR ML   I+ D V +    SAC  L AL   + I+A    +G 
Sbjct: 525 --GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 582

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D+    ALV +++RCG  + +   F + E  D  AW A +      GN E+A+ +F  
Sbjct: 583 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 642

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M R+GI  ++  F   + A S    + QG  +   +T   G   +      ++ +  + G
Sbjct: 643 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCG 701

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            + +A      +  + N+V W +++ A  KH
Sbjct: 702 SISDAEKQFLEVSTK-NEVSWNAIINAYSKH 731



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 248/533 (46%), Gaps = 41/533 (7%)

Query: 133 GILPDKFTFPFVLNACTKSS-AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
           GI P+  T  ++L  C K++ +  EG ++H  I+K+G D +  +   L +FY   GD+  
Sbjct: 39  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-A 250
             +VFDEM ER + +W  +I   A R+L  E   LF  MV E + PN  T   V+ AC  
Sbjct: 99  AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
                ++ +++ A I   G++ + ++ N L+D+Y + G VD A+++F   + ++      
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++S   +     EA+ +  +M + G  P      S +SA  ++  L  G   HG VL+ G
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 278

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
                 +CN ++ +Y   G    A  IF +MS +  V++N+LI GL              
Sbjct: 279 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL-------------- 324

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                            +Q    E+AMELF+ M  + ++ D  T+  +  AC   G L  
Sbjct: 325 -----------------SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            + ++AY  K G   + ++  AL++++A+C D + A+  F   E  +V  W   + A  +
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 427

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
             +   +  +F +M  + I P+   +  +L  C   G +  G  +    + I   + Q+ 
Sbjct: 428 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLN 484

Query: 611 HYGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
            Y C  ++D+  + G L  A D++  +     DV+ W +++A   ++   D A
Sbjct: 485 AYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKA 535


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 274/819 (33%), Positives = 429/819 (52%), Gaps = 44/819 (5%)

Query: 29   TPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
            TP    S+  L  CK +  L+   Q H  +LK G        + +V     +G   +L  
Sbjct: 287  TPYAFSSV--LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG---NLIS 341

Query: 86   AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
            A+  F      N +      YN+LI G S  G G +A+ L+  +   G+ PD  T   ++
Sbjct: 342  AEHIFS-----NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396

Query: 146  NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
             AC+       G Q+H    K+GF  +  +E  L+N Y +C DI      F E    NVV
Sbjct: 397  VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456

Query: 206  SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
             W  ++ A    D  + +  +F +M  E I PN  T   ++  C +L +LELG+++ + I
Sbjct: 457  LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516

Query: 266  DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
             +   + NA + + L+DMY K G +DTA  +      +++V   T+++ Y +     +AL
Sbjct: 517  IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576

Query: 326  AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
                +ML  G R D V + +AVSA A L  L  G+  H     +G        N ++ +Y
Sbjct: 577  TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636

Query: 386  MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
             +CGK                               +E +   F +    D+I+WN ++ 
Sbjct: 637  SRCGK-------------------------------IEESYLAFEQTEAGDNIAWNALVS 665

Query: 446  GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
            G  Q    EEA+ +F  M  E I  +  T      A      +   K ++A I K G   
Sbjct: 666  GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725

Query: 506  DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
            + ++  AL+ M+A+CG    A + F  +  ++  +W A I A +  G G +A++ F++M+
Sbjct: 726  ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785

Query: 566  RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
               ++P+ +  VGVL+ACSH GLV++G   F SM   +G+SP+  HY C+VD+L RAGLL
Sbjct: 786  HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845

Query: 626  GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
              A + I+ MP++P+ ++W +LL+AC  H+N++I  +AA  + EL+PE S  +VLLSN+Y
Sbjct: 846  SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905

Query: 686  ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
            A + KW      R +MKE+G++K PG S IEV   +H F  GD++HP  + I    +++ 
Sbjct: 906  AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 965

Query: 746  CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             R  + GYV D  ++L ++  ++K  ++  HSEKLA++FGL+S   T+PI V+KNLR+C 
Sbjct: 966  KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 1025

Query: 806  DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH++ K VSKV +REIIVRD  RFH F  G+CSC D+W
Sbjct: 1026 DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 173/631 (27%), Positives = 300/631 (47%), Gaps = 47/631 (7%)

Query: 29  TPKDSPSIGSLKNCK----TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
           TP +    G L+ C+      + ++Q H  IL QGL       + ++   ++ G  +   
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVD--- 239

Query: 85  YAQKAFD-YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
            A++ FD   +KD+ +      + ++I G S      EAI L+ ++   GI+P  + F  
Sbjct: 240 LARRVFDGLRLKDHSS------WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL+AC K  +   G Q+HG ++K+GF  D +V N L++ Y   G+++    +F  MS+R+
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
            V++ +LI   ++    ++A+ LF  M  +G++P+S T+  ++ AC+    L  G ++ A
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y  +LG  +N  +  AL+++Y KC  ++TA   F E +  N+VL N ++  Y  L   R 
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           +  I  +M +    P++ T  S +    +LGDL  G   H  +++   +    +C+ +ID
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY K GK + A  I    + K VVSW ++IA                             
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIA----------------------------- 564

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
             G TQ N  ++A+  FR ML   I+ D V +    SAC  L AL   + I+A    +G 
Sbjct: 565 --GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D+    ALV +++RCG  + +   F + E  D  AW A +      GN E+A+ +F  
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M R+GI  ++  F   + A S    + QG  +   +T   G   +      ++ +  + G
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCG 741

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            + +A      +  + N+V W +++ A  KH
Sbjct: 742 SISDAEKQFLEVSTK-NEVSWNAIINAYSKH 771



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 248/533 (46%), Gaps = 41/533 (7%)

Query: 133 GILPDKFTFPFVLNACTKSS-AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
           GI P+  T  ++L  C K++ +  EG ++H  I+K+G D +  +   L +FY   GD+  
Sbjct: 79  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-A 250
             +VFDEM ER + +W  +I   A R+L  E   LF  MV E + PN  T   V+ AC  
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
                ++ +++ A I   G++ + ++ N L+D+Y + G VD A+++F   + ++      
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++S   +     EA+ +  +M + G  P      S +SA  ++  L  G   HG VL+ G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
                 +CN ++ +Y   G    A  IF +MS +  V++N+LI GL              
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL-------------- 364

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                            +Q    E+AMELF+ M  + ++ D  T+  +  AC   G L  
Sbjct: 365 -----------------SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            + ++AY  K G   + ++  AL++++A+C D + A+  F   E  +V  W   + A  +
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
             +   +  +F +M  + I P+   +  +L  C   G +  G  +    + I   + Q+ 
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLN 524

Query: 611 HYGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
            Y C  ++D+  + G L  A D++  +     DV+ W +++A   ++   D A
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKA 575



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 4/232 (1%)

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC-G 483
            R VF  + G    S+  +   ++++  F+E  +    + +  I+ +  T+  +   C  
Sbjct: 39  TRTVFPTLCGTRRASFAAISVYISEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLK 96

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
             G+LD  + +++ I K G+  +  L+  L D +   GD   A +VF  M +R +  W  
Sbjct: 97  TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I  +A      +   LF  M+ + + P+   F GVL AC  G +         +     
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           G+    V    ++DL  R G +  A  +   + ++ +   W ++++   K++
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS-WVAMISGLSKNE 267


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/646 (38%), Positives = 388/646 (60%), Gaps = 6/646 (0%)

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           + + SL+   +R   P+  +  +  +   G + + ++   ++ A +K+  L  G  +  +
Sbjct: 80  IVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGF 139

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
             ++   ++  +   L+DMY  CG ++ A+ +F E   R++V  NT++  Y R GL  EA
Sbjct: 140 AFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEA 199

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
             + +EM      PD + + + VSA  + G++   R  + +++ N +     +   ++ M
Sbjct: 200 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTM 259

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y   G  +MA   F  MS + +    ++++G  K G ++ AR +F +   +D + W TM+
Sbjct: 260 YAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMI 319

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
               + +  +EA+ +F  M    IK D VTM+ V SAC  LG LD AKW++ Y   NG+ 
Sbjct: 320 SAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLE 379

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
             + +  AL++M+A+CG    A  VF +M  R+V +W++ I A AM G    ++ LF +M
Sbjct: 380 SVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQM 439

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
            ++ ++P+ + FVGVL  CSH GLV +G  +F SMTD + ++P+I HYGCMVDL GRA L
Sbjct: 440 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANL 499

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EAL++I+SMP+ PN VIWGSL++AC+ H  +++   AA+RI +L+P+  G  VL+SNI
Sbjct: 500 LREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNI 559

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YA   +W  V  +R  M+++ + K  G S I++NGK HEF  GD+ H + N I + L E+
Sbjct: 560 YAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEV 619

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP------IRVV 798
             +L+ AGYVPD  +VL+DV+E+EKK L+  HSEKLA+ FGL++  K         IR+V
Sbjct: 620 VSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIV 679

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH+F KLVSKVY+ EIIVRD  RFH ++ G CSC D+W
Sbjct: 680 KNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 164/570 (28%), Positives = 259/570 (45%), Gaps = 80/570 (14%)

Query: 28  TTPKDSPSIG---------SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMG 78
           T P   PS            L  CK+LN +KQ H HIL+  + HK +     +   +   
Sbjct: 2   TLPPPRPSFAVSAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNL---SFSS 58

Query: 79  TFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
           +  +L+YA   F       E+     ++NSL+R  S  G     I  Y  +   G   D+
Sbjct: 59  SSINLSYALNLFSSISPLPES----IVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDR 114

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
            +FP +L A +K SA  EG+++HG   K+    D FVE  L++ Y  CG I   R VFDE
Sbjct: 115 ISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDE 174

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           MS+R+VV+W ++I    R  L  EA  LF EM +  + P+ + +  ++SAC +  N+   
Sbjct: 175 MSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 234

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             +  ++ E  ++ +  ++ ALV MY   G +D A + F +   RNL +   ++S Y + 
Sbjct: 235 RAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKA 294

Query: 319 GL-------------------------------AREALAILDEMLLHGPRPDRVTMLSAV 347
           G                                 +EAL + +EM   G +PD VTMLS +
Sbjct: 295 GRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVI 354

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           SA   LG L   +  H Y   NGLE    I N +I+MY KCG  + A  +F+ M  + VV
Sbjct: 355 SACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVV 414

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SW+S+I     +G+   +  +F++M                QEN                
Sbjct: 415 SWSSMINAFAMHGEASDSLSLFAQM---------------KQEN---------------- 443

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRA 526
           ++ + VT VGV   C + G ++  K I+A + ++  I   ++    +VD+F R    + A
Sbjct: 444 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREA 503

Query: 527 MQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           ++V   M    +V  W + + A  + G  E
Sbjct: 504 LEVIESMPMAPNVVIWGSLMSACRVHGELE 533



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 184/395 (46%), Gaps = 50/395 (12%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           + YA+  FD       +   +  +N++I  Y   GL  EA  L+ E+    ++PD+    
Sbjct: 165 INYARNVFD-----EMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILC 219

Query: 143 FVLNACTKSSAFGEGVQVHGAIVK------------------------MGFD-------R 171
            +++AC ++        ++  +++                        M  +       R
Sbjct: 220 NIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVR 279

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           ++FV   +++ Y + G + D R +FD+   +++V WT++I A A  D P+EA+ +F EM 
Sbjct: 280 NLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMC 339

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
             GIKP+ VTM+ VISAC  L  L+    V  Y    G+++   + NAL++MY KCG +D
Sbjct: 340 CSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLD 399

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV---- 347
            A+ +F +   RN+V  +++++ +   G A ++L++  +M      P+ VT +  +    
Sbjct: 400 AARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCS 459

Query: 348 -SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKT 405
            S   + G  +   M   Y +   +E +      M+D++ +      A  + + M     
Sbjct: 460 HSGLVEEGKKIFASMTDEYNITPKIEHY----GCMVDLFGRANLLREALEVIESMPMAPN 515

Query: 406 VVSWNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
           VV W SL++    +G++E    +A+ +    P  D
Sbjct: 516 VVIWGSLMSACRVHGELELGELAAKRILKLEPDHD 550


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 296/883 (33%), Positives = 460/883 (52%), Gaps = 111/883 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQG------------LGHKPS--YISKVVCTCAQMGTFESLT 84
           LK C+++N ++Q H  I+  G            L   PS  Y+S        + ++ +  
Sbjct: 38  LKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVASYLACG 97

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
             + A    + +  T +    +N L+R +   G    AI +   +   G  PD FT P+ 
Sbjct: 98  ATKDALS--VLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYA 155

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-- 202
           L AC +  ++  G  +HG I   GF+ +VFV N L+  Y  CG + D   VFDE++ +  
Sbjct: 156 LKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGI 215

Query: 203 -NVVSWTSLICACARRDLPKEAVYLFFEM---VEEGI---KPNSVTMVCVISACAKLQNL 255
            +V+SW S++ A  +   P+ A+ LF EM   V E     + + +++V ++ ACA L+ L
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKAL 275

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKD----------- 302
                + +Y    G  A+A + NAL+D Y KCG+++ A ++F   E KD           
Sbjct: 276 PQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGY 335

Query: 303 ----------------------RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                                  +++  + +++ Y + G ++EAL    +M+L G  P+ 
Sbjct: 336 TQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNS 395

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS------------ICNTMIDMYMKC 388
           VT++S +SA A LG L  G   H Y L+  L   D+            + N +IDMY KC
Sbjct: 396 VTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKC 455

Query: 389 GKQEMACRIFDHMS--NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
              + A  IFD +    + VV+W  +I G  + GD   A ++FSEM  + +         
Sbjct: 456 RSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYA-------- 507

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                                +  +  T+  +  AC +L AL + K I+AY+ +   H +
Sbjct: 508 ---------------------VAPNAYTISCILMACAHLAALRMGKQIHAYVTR---HHE 543

Query: 507 MQ-----LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +     +A  L+DM+++CGD   A  VF  M KR+  +WT+ +    M G G++A+++F
Sbjct: 544 YEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIF 603

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           ++M + G  PD I F+ +L ACSH G+V+QG + F  M   + V     HY C++DLL R
Sbjct: 604 DKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLAR 663

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
            G L +A   I+ MP+EP+ VIW +LL+AC+ H NV++A YA  ++  +  E  G + L+
Sbjct: 664 CGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLI 723

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIYA+A +W +VAR+R  MK+ GI+K PG S ++       F  GD SHP    I S+L
Sbjct: 724 SNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLL 783

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
             +  R++  GYVP+    L DVD++EK  LLS HSEKLA+A+GL++TS   PIR+ KNL
Sbjct: 784 ERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNL 843

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCHS    +SK+ D EIIVRD++RFH F+ GSCSC  +W
Sbjct: 844 RVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 250/714 (35%), Positives = 409/714 (57%), Gaps = 38/714 (5%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI  D F    + +A  K+    +  Q+H  ++ +G     F+   LI+     GDI   
Sbjct: 17  GIHSDSFYASLIDSATHKA----QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R+VFD++    +  W ++I   +R +  ++A+ ++  M    + P+S T   ++ AC+ L
Sbjct: 73  RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNT 310
            +L++G  V A +  LG  A+  + N L+ +Y KC  + +A+ +F      +R +V    
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           I+S Y + G   EAL I  +M     +PD V ++S ++A   L DL  GR  H  V++ G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           LE    +  ++  MY KCG+                               V +A+ +F 
Sbjct: 253 LEIEPDLLISLNTMYAKCGQ-------------------------------VATAKILFD 281

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
           +M   + I WN M+ G  +     EA+++F  M+++ ++ D +++    SAC  +G+L+ 
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
           A+ +Y Y+ ++    D+ +++AL+DMFA+CG  + A  VF R   RDV  W+A I    +
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G   +A+ L+  M R G+ P+ + F+G+L AC+H G+V +GW  F  M D H ++PQ  
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQ 460

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           HY C++DLLGRAG L +A ++IK MPV+P   +WG+LL+AC+KH++V++  YAA+++  +
Sbjct: 461 HYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI 520

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           DP  +G +V LSN+YA+A  W  VA VR++MKE+G+ K  G S +EV G++  F  GD+S
Sbjct: 521 DPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKS 580

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           HP    I   +  +  RL++ G+V +    L D++++E +  L  HSE++A+A+GLIST 
Sbjct: 581 HPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTP 640

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  P+R+ KNLR C +CH+  KL+SK+ DREI+VRD NRFH F+ G CSC D+W
Sbjct: 641 QGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 165/539 (30%), Positives = 271/539 (50%), Gaps = 48/539 (8%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           LA+P + T +  H       DS     + +     +LKQ H  +L  GL      I+K++
Sbjct: 7   LASPLLYTNSGIHS------DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI 60

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
              +  G    +T+A++ FD     +     +F +N++IRGYS      +A+ +Y  +  
Sbjct: 61  HASSSFG---DITFARQVFD-----DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
             + PD FTFP +L AC+  S    G  VH  + ++GFD DVFV+N LI  Y +C  +  
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172

Query: 192 GRRVFD--EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            R VF+   + ER +VSWT+++ A A+   P EA+ +F +M +  +KP+ V +V V++A 
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             LQ+L+ G  + A + ++G++    ++ +L  MY KCG V TAK LF + K  NL+L N
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++S Y + G AREA+ +  EM+    RPD +++ SA+SA AQ+G L   R  + YV R+
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
                  I + +IDM+ KCG  E A  +FD   ++ VV W+++I G   +G         
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRA------- 405

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                    EA+ L+R M    +  + VT +G+  AC + G + 
Sbjct: 406 ------------------------REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              W +  +  + I+   Q    ++D+  R G   +A +V + M  +  V+ W A + A
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 8/184 (4%)

Query: 474 TMVGVASACGYLGALDLA------KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           T  G+ S   Y   +D A      K I+A +   G+     L T L+   +  GD   A 
Sbjct: 14  TNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFAR 73

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           QVF  + +  +  W A I   +   + + A+ +++ M    + PDS  F  +L ACS   
Sbjct: 74  QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGS 646
            +  G  +   +  + G    +     ++ L  +   LG A  + + +P+    ++ W +
Sbjct: 134 HLQMGRFVHAQVFRL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192

Query: 647 LLAA 650
           +++A
Sbjct: 193 IVSA 196


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 285/914 (31%), Positives = 462/914 (50%), Gaps = 91/914 (9%)

Query: 12  LATPTVTTLTNQHKAKTTPK-----DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSY 66
           L  P    LT  HK   TP      DS S        +L  +K  H  ++K      P  
Sbjct: 10  LHPPLQNPLT--HKPIKTPTSKLYLDSHSSDDSNVITSLTSVKMMHAQMIKLPQKWNPDA 67

Query: 67  ISK-VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGY-SCIGLGVEAIS 124
            +K ++ +    G F S      A  +Y+           +NS +  + S  G     + 
Sbjct: 68  AAKNLISSYLGFGDFWS-----AAMVFYVG---LPRNYLKWNSFVEEFKSSAGSLHIVLE 119

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           ++ EL G G++ D   +   L  CT+      G+++HG ++K GFD DV++   L+NFYG
Sbjct: 120 VFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYG 179

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
            C  +    +VF EM     + W   I    + +  ++ V LF +M    +K  + T+V 
Sbjct: 180 RCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVR 239

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V+ AC K+  L    ++  Y+   G+ ++  + N L+ MY K G ++ A+++F   ++RN
Sbjct: 240 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 299

Query: 305 LVLCNTIMSNYVRLGL-----------------------------------AREALAILD 329
               N+++S+Y  LG                                      E L IL 
Sbjct: 300 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 359

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            M   G +P+  +M S + A ++LG L  G+  HGYVLRNG +    +  ++IDMY+K  
Sbjct: 360 RMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNH 419

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLG 445
               A  +FD+M N+ + +WNSL++G    G  E A  + ++M       D ++WN M+ 
Sbjct: 420 SLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 479

Query: 446 GL-----------------------------------TQENMFEEAMELFRVMLSERIKV 470
           G                                    +Q     ++++ F  M  E +  
Sbjct: 480 GYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMP 539

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           +  ++  +  AC  L  L   K I+    +NG   D+ +ATAL+DM+++    + A +VF
Sbjct: 540 NSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF 599

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           RR++ + +++W   I   A+ G G++A+ +FNEM + G+ PD+I F  +L+AC + GL+ 
Sbjct: 600 RRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIG 659

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +GW  F SM   + + P++ HY CMVDLLGRAG L EA DLI +MP++P+  IWG+LL +
Sbjct: 660 EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 719

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H+N+  A  AA+ + +L+P  S  ++L+ N+Y+   +W ++  +R  M   G+R   
Sbjct: 720 CRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQ 779

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
             S I++N +VH F+S ++ HP+   I   L ++   ++  GYVPD+  V  ++DE EK+
Sbjct: 780 VWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQ 839

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
            +L  H+EKLA+ +GLI      PIRV+KN R+C DCHS AK +S V  RE+ +RD  RF
Sbjct: 840 KILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRF 899

Query: 831 HFFRQGSCSCSDFW 844
           H FR+G CSC+DFW
Sbjct: 900 HHFREGKCSCNDFW 913


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 259/687 (37%), Positives = 390/687 (56%), Gaps = 32/687 (4%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q H  ++++G  +D ++ N L+              VF +    N+  + +LI      D
Sbjct: 21  QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSND 80

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN-LELGDRVCAYIDELGMKANALMV 277
             ++AV ++  M + G  P++ T   V+ AC +L +   +G  + + + + G   +  + 
Sbjct: 81  AFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVK 140

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
             LV +Y K G +  A+++F E  ++N+V    I+  Y+  G   EAL +   +L  G R
Sbjct: 141 TGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 200

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD  T++  + A +++GDL  GR   GY+  +G  G   +  +++DMY KCG        
Sbjct: 201 PDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS------- 253

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                   +E AR VF  M  +D + W+ ++ G     M +EA+
Sbjct: 254 ------------------------MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEAL 289

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           ++F  M  E ++ D   MVGV SAC  LGAL+L  W    ++ +    +  L TAL+D +
Sbjct: 290 DVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFY 349

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG   +A +VF+ M ++D   + A I  +AM G+   A  +F +M++ G++PD   FV
Sbjct: 350 AKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFV 409

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           G+L  C+H GLV+ G   F  M+ +  V+P I HYGCMVDL  RAGLL EA DLI+SMP+
Sbjct: 410 GLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPM 469

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           E N ++WG+LL  C+ H++  +A +  +++ EL+P  SG +VLLSNIY+++ +W    ++
Sbjct: 470 EANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKI 529

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  + ++G++KLPG S +EV+G VHEF  GD SHP  + I   L  +   LR+AGY P  
Sbjct: 530 RSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTT 589

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
             VL DV+E+EK+Y L  HSEKLA+AF LIST     IRVVKNLR+C DCH   KLVSKV
Sbjct: 590 EFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKV 649

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
             REIIVRDNNRFH F +GSCSC D+W
Sbjct: 650 TGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 231/437 (52%), Gaps = 18/437 (4%)

Query: 39  LKNC-----KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           LK C     K+L++ KQ HC +L+ GL H+ +Y+  ++          SL +A   +   
Sbjct: 5   LKKCFAWGLKSLHQAKQCHCLLLRLGL-HQDTYLINLLLR-------SSLHFAATQYATV 56

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK-SS 152
           +        +F+YN+LIRG        +A+S+Y  +   G  PD FTFPFVL ACT+   
Sbjct: 57  VFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPH 116

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
            F  G+ +H  ++K GFD DVFV+  L+  Y + G + D R+VFDE+ E+NVVSWT++IC
Sbjct: 117 YFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIIC 176

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
                    EA+ LF  ++E G++P+S T+V ++ AC+++ +L  G  +  Y+ E G   
Sbjct: 177 GYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVG 236

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N  +  +LVDMY KCG+++ A+++F    ++++V  + ++  Y   G+ +EAL +  EM 
Sbjct: 237 NVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQ 296

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               RPD   M+   SA ++LG L  G    G +  +       +   +ID Y KCG   
Sbjct: 297 RENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVA 356

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG----RDHISWNTMLGGLT 448
            A  +F  M  K  V +N++I+GL   G V +A  VF +M       D  ++  +L G T
Sbjct: 357 QAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCT 416

Query: 449 QENMFEEAMELFRVMLS 465
              + ++    F  M S
Sbjct: 417 HAGLVDDGHRYFSGMSS 433



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 20/388 (5%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H  ++K G        + +VC  ++ G    LT A+K FD   + N  S     + ++I 
Sbjct: 125 HSLVIKTGFDWDVFVKTGLVCLYSKNGF---LTDARKVFDEIPEKNVVS-----WTAIIC 176

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
           GY   G   EA+ L+  L   G+ PD FT   +L AC++      G  + G + + G   
Sbjct: 177 GYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVG 236

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           +VFV   L++ Y +CG + + RRVFD M E++VV W++LI   A   +PKEA+ +FFEM 
Sbjct: 237 NVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQ 296

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            E ++P+   MV V SAC++L  LELG+     +D     +N ++  AL+D Y KCG+V 
Sbjct: 297 RENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVA 356

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            AK++F   + ++ V+ N ++S     G    A  +  +M+  G +PD  T +  +    
Sbjct: 357 QAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCT 416

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNT------MIDMYMKCGKQEMACRIFDHMS-NK 404
             G +  G   H Y   +G+    S+  T      M+D+  + G    A  +   M    
Sbjct: 417 HAGLVDDG---HRYF--SGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEA 471

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEM 432
             + W +L+ G   + D + A  V  ++
Sbjct: 472 NSIVWGALLGGCRLHKDTQLAEHVLKQL 499



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 96/262 (36%), Gaps = 45/262 (17%)

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           L +L  AK  +  + + G+H D  L   L+         Q A  VF +    ++  +   
Sbjct: 13  LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS------------HGGLVNQG 592
           I  M        AV ++  M + G  PD+  F  VL AC+            H  ++  G
Sbjct: 73  IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132

Query: 593 --WHLFRS------------MTDIHGVSPQI-----VHYGCMVDLLGRAGLLGEALDLIK 633
             W +F              +TD   V  +I     V +  ++     +G  GEAL L +
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192

Query: 634 S---MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG------VHVLLSNI 684
               M + P+      +L AC +     +   A+ R  +    +SG      V   L ++
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSR-----VGDLASGRWIDGYMRESGSVGNVFVATSLVDM 247

Query: 685 YASAGKWTNVARVRLQMKEQGI 706
           YA  G      RV   M E+ +
Sbjct: 248 YAKCGSMEEARRVFDGMVEKDV 269


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 271/755 (35%), Positives = 413/755 (54%), Gaps = 36/755 (4%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           +Y+    +   +F +N L+ GY+  G   EA++LY  +    I P+ +TFP VL  C   
Sbjct: 152 WYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGV 211

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
           S    G ++H  +++ GF+ DV V N LI  Y +CGDI + R +FD+M +R+ +SW ++I
Sbjct: 212 SDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMI 271

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
                     E + LF  M E  + P+ +TM  V SAC  L N  LG  V  Y+ +    
Sbjct: 272 SGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFG 331

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            +  M N+L+ MY   G ++ A+ +F   + +++V    ++++ V   L  +A+     M
Sbjct: 332 GDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMM 391

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
            L G  PD +T++S +SA A +G L  G   H   ++ GL     + N++IDMY KC   
Sbjct: 392 ELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCV 451

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           + A  +F ++S K VVSW SLI GL  N                               N
Sbjct: 452 DNALEVFRNISGKNVVSWTSLILGLRIN-------------------------------N 480

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  FR M  E +K + VT++ V SAC  +GAL   K I+A+  + G+  D  L  
Sbjct: 481 RSFEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN 539

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           A++DM+ RCG    A+  F   +K+DV+AW   +   A +G  + AVELF++ML   I P
Sbjct: 540 AILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHP 598

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I F+ +L ACS  G+V +G   F  M + + ++P + HY C+VD+LGRAG L +A D 
Sbjct: 599 DEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDF 658

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I+ MP+ P+  IWG+LL AC+ H+NV++   AA+R+ E D +  G ++LL N+YA  G W
Sbjct: 659 IQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNW 718

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             V++VR  M+E+G+   PG S +E+ GKVH F SGD SH +   I+ +L     ++++ 
Sbjct: 719 DKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKEN 778

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           G+  +L +      E  +  +   HSE+ A+AFGLI+T+  MPI V KNL +C  CH+  
Sbjct: 779 GF-GNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMV 837

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSD--FW 844
           K +S +  REI VRD   +H F+ G CSC D  +W
Sbjct: 838 KFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 259/533 (48%), Gaps = 45/533 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C    A  EG +V+  +        V + N L++ +   G+++D   VF +MSER+
Sbjct: 103 LLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD 162

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V SW  L+   A+     EA+ L+  M+   I+PN  T   V+  CA + ++  G  + A
Sbjct: 163 VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHA 222

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           ++   G +++  + NAL+ MY+KCG +  A+ LF +   R+ +  N ++S Y   G   E
Sbjct: 223 HVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLE 282

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            L +   M      PD +TM +  SA   L +   GR  HGYV+++   G  S+ N++I 
Sbjct: 283 GLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQ 342

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY   G+ E A  +F  M +K VVSW ++IA L+ +           ++P +        
Sbjct: 343 MYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSH-----------KLPFK-------- 383

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
                       A+E +++M  E I  D +T+V V SAC  +G LDL   ++    K G+
Sbjct: 384 ------------AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
              + ++ +L+DM+++C     A++VFR +  ++V +WT+ I  + +     +A+  F +
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           M ++ +KP+S+  + VL+AC+  G + +G     H  R+     G  P  +     +D+ 
Sbjct: 492 M-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI-----LDMY 545

Query: 620 GRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAERITELD 671
            R G    AL+   S   +  DV  W  LL    +     +A    +++ EL+
Sbjct: 546 VRCGRKVPALNQFNS---QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 2/210 (0%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N  L  L  +   E+AM+    ML  RI+V+    + +   C +  A D    +Y  +  
Sbjct: 66  NLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSS 125

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           +     ++L  AL+ MF R G+   A  VF +M +RDV +W   +G  A  G  ++A+ L
Sbjct: 126 SKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNL 185

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           ++ ML   I+P+   F  VL  C+    + +G  +   +    G    +     ++ +  
Sbjct: 186 YHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRF-GFESDVDVGNALITMYV 244

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           + G +  A  L   MP + + + W ++++ 
Sbjct: 245 KCGDISNARMLFDKMP-KRDRISWNAMISG 273


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 271/755 (35%), Positives = 413/755 (54%), Gaps = 36/755 (4%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           +Y+    +   +F +N L+ GY+  G   EA++LY  +    I P+ +TFP VL  C   
Sbjct: 152 WYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGV 211

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
           S    G ++H  +++ GF+ DV V N LI  Y +CGDI + R +FD+M +R+ +SW ++I
Sbjct: 212 SDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMI 271

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
                     E + LF  M E  + P+ +TM  V SAC  L N  LG  V  Y+ +    
Sbjct: 272 SGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFG 331

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            +  M N+L+ MY   G ++ A+ +F   + +++V    ++++ V   L  +A+     M
Sbjct: 332 GDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMM 391

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
            L G  PD +T++S +SA A +G L  G   H   ++ GL     + N++IDMY KC   
Sbjct: 392 ELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCV 451

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           + A  +F ++S K VVSW SLI GL  N                               N
Sbjct: 452 DNALEVFRNISGKNVVSWTSLILGLRIN-------------------------------N 480

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  FR M  E +K + VT++ V SAC  +GAL   K I+A+  + G+  D  L  
Sbjct: 481 RSFEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN 539

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           A++DM+ RCG    A+  F   +K+DV+AW   +   A +G  + AVELF++ML   I P
Sbjct: 540 AILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHP 598

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I F+ +L ACS  G+V +G   F  M + + ++P + HY C+VD+LGRAG L +A D 
Sbjct: 599 DEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDF 658

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I+ MP+ P+  IWG+LL AC+ H+NV++   AA+R+ E D +  G ++LL N+YA  G W
Sbjct: 659 IQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNW 718

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             V++VR  M+E+G+   PG S +E+ GKVH F SGD SH +   I+ +L     ++++ 
Sbjct: 719 DKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKEN 778

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           G+  +L +      E  +  +   HSE+ A+AFGLI+T+  MPI V KNL +C  CH+  
Sbjct: 779 GF-GNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMV 837

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSD--FW 844
           K +S +  REI VRD   +H F+ G CSC D  +W
Sbjct: 838 KFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 259/533 (48%), Gaps = 45/533 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C    A  EG +V+  +        V + N L++ +   G+++D   VF +MSER+
Sbjct: 103 LLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERD 162

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V SW  L+   A+     EA+ L+  M+   I+PN  T   V+  CA + ++  G  + A
Sbjct: 163 VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHA 222

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           ++   G +++  + NAL+ MY+KCG +  A+ LF +   R+ +  N ++S Y   G   E
Sbjct: 223 HVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLE 282

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            L +   M      PD +TM +  SA   L +   GR  HGYV+++   G  S+ N++I 
Sbjct: 283 GLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQ 342

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY   G+ E A  +F  M +K VVSW ++IA L+ +           ++P +        
Sbjct: 343 MYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSH-----------KLPFK-------- 383

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
                       A+E +++M  E I  D +T+V V SAC  +G LDL   ++    K G+
Sbjct: 384 ------------AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
              + ++ +L+DM+++C     A++VFR +  ++V +WT+ I  + +     +A+  F +
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           M ++ +KP+S+  + VL+AC+  G + +G     H  R+     G  P  +     +D+ 
Sbjct: 492 M-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI-----LDMY 545

Query: 620 GRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAERITELD 671
            R G    AL+   S   +  DV  W  LL    +     +A    +++ EL+
Sbjct: 546 VRCGRKVPALNQFNS---QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 2/210 (0%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N  L  L  +   E+AM+    ML  RI+V+    + +   C +  A D    +Y  +  
Sbjct: 66  NLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSS 125

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           +     ++L  AL+ MF R G+   A  VF +M +RDV +W   +G  A  G  ++A+ L
Sbjct: 126 SKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNL 185

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           ++ ML   I+P+   F  VL  C+    + +G  +   +    G    +     ++ +  
Sbjct: 186 YHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRF-GFESDVDVGNALITMYV 244

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           + G +  A  L   MP + + + W ++++ 
Sbjct: 245 KCGDISNARMLFDKMP-KRDRISWNAMISG 273


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 252/677 (37%), Positives = 394/677 (58%), Gaps = 64/677 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF  + E N +SW ++I   A    P  A+ L+  M+  G+ PNS T   +  +CAK + 
Sbjct: 34  VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV------------------------ 290
            + G ++ A I + G+  +  +  +L+ MY + G V                        
Sbjct: 94  AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153

Query: 291 -------DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
                  D A+++F E   +++V  N ++S Y  +G  +EAL + +EM+    +PD  TM
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            + +S     G++  GR  H ++  +G      + N +ID+Y KCG              
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCG-------------- 259

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                            ++E A  +F  +  +D ISWNT++GG    N  +EA+ +F+ M
Sbjct: 260 -----------------EMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEM 302

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQLATALVDMFARCG 521
           L      + VTM+ +  AC +LGA+D+ +WI+ YI+K   GI  +  L T+L+DM+A+CG
Sbjct: 303 LKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCG 362

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           + + A QVF  +  + +S+  A I   AM G  + A +L + M + GI+PD I FVG+L+
Sbjct: 363 NIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLS 422

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GL + G  +F+SMT  + + P++ HYGCM+DLLGR+GL  EA +LI SM +EP+ 
Sbjct: 423 ACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDG 482

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           VIWGSLL AC+ H+N+++    A+++ +++P+  G +VLLSNIYA++ +W +VARVR  +
Sbjct: 483 VIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLL 542

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            ++G++K+PG SSIE++  VHEF  GD+ HP+   I  ML E++  L + G+V D + VL
Sbjct: 543 NDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVL 602

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +++E+ K+  LS+HSEKLA+AFGLIST     +R+VKNLR+C +CH   KL+SK+Y RE
Sbjct: 603 QEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKRE 662

Query: 822 IIVRDNNRFHFFRQGSC 838
           II RD +RFH F+ G C
Sbjct: 663 IIARDRSRFHHFKDGMC 679



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 278/565 (49%), Gaps = 72/565 (12%)

Query: 56  LKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSC 115
           +K GL +    +SK++  C     F  L YA   F    + N+ S     +N++IRG++ 
Sbjct: 1   IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLS-----WNTMIRGHAL 55

Query: 116 IGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFV 175
               + A++LYV +   G+ P+ +TFPF+  +C KS A  EG Q+H  I+K G   D+ V
Sbjct: 56  SSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHV 115

Query: 176 ENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR-----------DLP---- 220
              LI+ Y + G + D  +VFD  S R+VVS+T++I   A R           ++P    
Sbjct: 116 HTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDV 175

Query: 221 ----------------KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
                           KEA+ LF EM++  +KP+  TM  V+S C    N+ELG ++ ++
Sbjct: 176 VSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSW 235

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           ID  G  +N  +VNAL+D+Y KCG ++ A  LF   + ++++  NT++  Y  +   +EA
Sbjct: 236 IDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEA 295

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSICNTMI 382
           L +  EML  G  P+ VTMLS + A A LG +  GR  H Y+ +   G+    S+  ++I
Sbjct: 296 LLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLI 355

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY KCG  E A ++FD + NK++ S N++I G   +G  ++A ++ S M          
Sbjct: 356 DMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMK--------- 406

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN- 501
                                  + I+ D +T VG+ SAC + G  DL + I+  +  + 
Sbjct: 407 ----------------------KDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDY 444

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVEL 560
            I   ++    ++D+  R G  + A ++   M  + D   W + + A  +  N E    +
Sbjct: 445 RIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELI 504

Query: 561 FNEMLRQGIK-PDSIVFVGVLTACS 584
             ++++   K P S V +  + A S
Sbjct: 505 AQKLMKIEPKNPGSYVLLSNIYATS 529



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 199/394 (50%), Gaps = 35/394 (8%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F   ++ N +  NT++  +        AL +   M+  G  P+  T      + A+
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
                 G+  H  +L+ GL     +  ++I MY + G  E A ++FD  S++ VVS+ ++
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I G    G+++ A+++F E+P +D +SWN M+ G  +   ++EA+ELF  M+   +K D 
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            TM  V S C + G ++L + I+++I+ +G   +++L  AL+D++++CG+ +RA  +F  
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           ++ +DV +W   IG  A   + ++A+ +F EML+ G  P+ +  + +L AC+H G ++ G
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330

Query: 593 -W-HLF---------------RSMTDIHGVSPQIVHYGCMVDLL---------------- 619
            W H++                S+ D++     I     + D +                
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA 390

Query: 620 --GRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
             GRA    + L  +K   +EP+D+ +  LL+AC
Sbjct: 391 MHGRADAAFDLLSRMKKDGIEPDDITFVGLLSAC 424


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/803 (34%), Positives = 419/803 (52%), Gaps = 39/803 (4%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C  L+  KQ H    K GL       S +V   A+ G  E    A K F    + N+ + 
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIE---LASKMFIGMPEQNDVT- 281

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               +N L+ GY+  G     + L+  +    +  ++FT   VL  C  S    +G  +H
Sbjct: 282 ----WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIH 337

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             I+K G++ + F+   L++ Y +CG  +D   VF  + + ++V W++LI    ++   +
Sbjct: 338 SLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSE 397

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           E++ LF  M      PN  T+  ++SA     NL+ G  + A + + G + +  + NALV
Sbjct: 398 ESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALV 457

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            MYMK G V    +L+    DR+L+  N  +S     G+    L I   ML  G  P+  
Sbjct: 458 TMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMY 517

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T +S + + + L D+  GR  H ++++N L+  + +C  +IDMY KC             
Sbjct: 518 TFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY----------- 566

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                               +E A   F+ +  RD  +W  ++    Q N  E+A+  FR
Sbjct: 567 --------------------LEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFR 606

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M  E +K +  T+ G  S C  L +L+  + +++ + K+G   DM + +ALVDM+A+CG
Sbjct: 607 QMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             + A  +F  + +RD  AW   I   A  G G +A+  F  ML +GI PD + F G+L+
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV +G   F SM    G+SP + H  CMVD+LGR G   E  D I+ M +  N 
Sbjct: 727 ACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNA 786

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           +IW ++L A + H N+ +   AA ++ EL PE+   ++LLSNI+A+ G+W +V RVR  M
Sbjct: 787 LIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLM 846

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
             +G++K PG S +E NG+VH F S D SHP++  I   L E++  L    YVP    VL
Sbjct: 847 SSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVL 906

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +V E EKK  L  HSE+LA+ F LISTS    IR+ KNLR+C DCH   K +S + ++E
Sbjct: 907 HNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQE 966

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+VRD  RFH F+ G+CSC+DFW
Sbjct: 967 IVVRDVRRFHHFKNGACSCNDFW 989



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 268/551 (48%), Gaps = 35/551 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +LI+G    G   ++I L+ E+   GI+P++FT    L AC+   A   G Q+H    
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G   D+FV + L++ Y +CG+I    ++F  M E+N V+W  L+   A+R      + 
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF  M+E  +K N  T+  V+  CA  +NL+ G  + + I + G + N  +   LVDMY 
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG    A  +F   K  ++V+ + +++   + G + E++ +   M L    P++ T+ S
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICS 420

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +SA+   G+L  G+  H  V + G E   ++ N ++ MYMK G      ++++ M ++ 
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           ++SWN+ ++GL   G                               M++  + +F  ML 
Sbjct: 481 LISWNAYLSGLHDCG-------------------------------MYDRPLTIFYHMLE 509

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E    +  T + +  +C  L  +   + ++A+I KN +  +  + TAL+DM+A+C   + 
Sbjct: 510 EGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLED 569

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A   F R+  RD+  WT  I   A    GE+A+  F +M ++G+KP+     G L+ CS 
Sbjct: 570 ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
              +  G  L  SM    G    +     +VD+  + G + EA  L +++ +  + + W 
Sbjct: 630 LASLEGGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWN 687

Query: 646 SLLAACQKHQN 656
           +++  C   QN
Sbjct: 688 TII--CGYAQN 696



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 209/444 (47%), Gaps = 31/444 (6%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L  C    + G    +HG IVK   + D  +   L+N Y +C      R V  +M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +R+VVSWT+LI          +++YLF EM  EGI PN  T+   + AC+    L+LG +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           + A   +LG+  +  + +ALVD+Y KCG ++ A ++F    ++N V  N +++ Y + G 
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
               L +   M+    + +  T+ + +   A   +L  G++ H  +++ G EG + I   
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++DMY KCG    A  +F  +    +V W++LI                           
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALIT-------------------------- 388

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
                 L Q+   EE+++LF +M       ++ T+  + SA    G L   + I+A + K
Sbjct: 389 -----CLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
            G   D+ ++ ALV M+ + G      +++  M  RD+ +W A +  +   G  ++ + +
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503

Query: 561 FNEMLRQGIKPDSIVFVGVLTACS 584
           F  ML +G  P+   F+ +L +CS
Sbjct: 504 FYHMLEEGFIPNMYTFISILGSCS 527



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 6/277 (2%)

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W SL+    K      AR V ++MP RD +SW  ++ GL  E    +++ LF+ M +E I
Sbjct: 150 WVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGI 209

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             +  T+     AC    ALDL K ++A   K G+  D+ + +ALVD++A+CG+ + A +
Sbjct: 210 MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASK 269

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F  M +++   W   +   A  G+    ++LF  M+   +K +      VL  C++   
Sbjct: 270 MFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKN 329

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGC-MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           + QG  +   +        + +  GC +VD+  + GL  +A+ + K++  +P+ V+W +L
Sbjct: 330 LKQGQVIHSLIIKCGYEGNEFI--GCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSAL 386

Query: 648 LAAC--QKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           +     Q      I  +   R+ +  P +  +  LLS
Sbjct: 387 ITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLS 423



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 2/167 (1%)

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C    +L +AK I+  I K+ I+ D  L  +LV+++A+C     A  V  +M  RDV +W
Sbjct: 122 CASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSW 181

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           TA I  +  EG    ++ LF EM  +GI P+       L ACS    ++ G  +      
Sbjct: 182 TALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFK 241

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + G+   +     +VDL  + G +  A  +   MP E NDV W  LL
Sbjct: 242 L-GLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLL 286


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 271/766 (35%), Positives = 413/766 (53%), Gaps = 84/766 (10%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA---CAR 216
           VH  ++  GF    ++ N LI+ Y +  D+V    +FDE+ + ++V+ T+LI A      
Sbjct: 37  VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96

Query: 217 RDLPKE------------------------------AVYLFFEMVEEGIKPNSVTMVCVI 246
            +L +E                              A+ LF +++  G +P++ T   V+
Sbjct: 97  SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKC--------------- 287
            A A +   E   + C  I    +K+ +  V    NAL+ +++KC               
Sbjct: 157 GALALIVEDE---KQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAA 213

Query: 288 -------------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                                    G +D A+Q      ++ +V  N ++S YV  G   
Sbjct: 214 RKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFL 273

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN----GLEGWDSIC 378
           EAL +  +M L G + D  T  S +SA A  G  L G+  H Y+LR      L+   S+ 
Sbjct: 274 EALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVN 333

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N +  +Y KCGK + A ++F+ M  K +VSWN++++G +  G ++ A+  F EMP R+ +
Sbjct: 334 NALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLL 393

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +W  M+ GL Q    EE+++LF  M SE  +       G   AC +L AL   + ++A +
Sbjct: 394 TWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL 453

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            + G    +    AL+ M+A+CG  + A  +F  M   D  +W A I A+   G+G QA+
Sbjct: 454 VRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQAL 513

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           ELF  ML++ I PD I F+ VL+ CSH GLV +G   F+SM+ ++G+ P   HY  M+DL
Sbjct: 514 ELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDL 573

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           L RAG   EA D+I++MPVEP   IW +LLA C+ H N+D+   AAER+ EL P+  G +
Sbjct: 574 LCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTY 633

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLLSN+YA+ G+W +VA+VR  M+++G++K PG S IEV  KVH F   D  HPE+  + 
Sbjct: 634 VLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVY 693

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
           + L E+  ++R  GY+PD   VL D++ ++K+Y+LS HSEKLA+ FGL+       +RV 
Sbjct: 694 NYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVF 753

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH+  K +SKV +REI+VRD  RFH F+ G CSC ++W
Sbjct: 754 KNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 220/543 (40%), Gaps = 112/543 (20%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK-SSAFGEGVQVHGAI 164
           YN++I GYS    G  AI L+ +L   G  PD FTF  VL A         +  Q+H A+
Sbjct: 117 YNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAV 176

Query: 165 VKMGFDRDVFVENCLINFYGECG---------DIVDGRRVFDEMSERNVVSWTSLICACA 215
           VK G      V N L++ + +C           +   R++FDEM+ER+ +SWT++I    
Sbjct: 177 VKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYV 236

Query: 216 RR---DLPK----------------------------EAVYLFFEMVEEGIKPNSVTMVC 244
           R    D  +                            EA+ +F +M   GI+ +  T   
Sbjct: 237 RNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTS 296

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKAN---ALMV-NALVDMYMKCGAVDTAKQLFGEC 300
           V+SACA       G +V AYI     + +   +L V NAL  +Y KCG VD A+Q+F + 
Sbjct: 297 VLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQM 356

Query: 301 KDRNLVLCNTIMSNYVRL-------------------------------GLAREALAILD 329
             ++LV  N I+S YV                                 G   E+L + +
Sbjct: 357 PVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFN 416

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            M   G  P       A+ A A L  L+ GR  H  ++R G +   S  N +I MY KCG
Sbjct: 417 RMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCG 476

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             E A  +F  M     VSWN++IA L ++G                             
Sbjct: 477 VVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHG--------------------------- 509

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQ 508
                +A+ELF +ML E I  DR+T + V S C + G ++   ++  +     GI     
Sbjct: 510 ----AQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGED 565

Query: 509 LATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
               ++D+  R G    A  +   M  +     W A +    + GN   G QA E   E+
Sbjct: 566 HYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFEL 625

Query: 565 LRQ 567
           + Q
Sbjct: 626 MPQ 628



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 200/466 (42%), Gaps = 83/466 (17%)

Query: 49  KQPHCHILKQGLGHKPSYIS---KVVCTCAQMGTFES---LTYAQKAFDY---------- 92
           +Q HC ++K G G   S ++    V   CA      S   +  A+K FD           
Sbjct: 170 QQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWT 229

Query: 93  -----YIKDNE-----------TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP 136
                Y+++ E           T   +  +N++I GY   G  +EA+ ++ ++   GI  
Sbjct: 230 TMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW 289

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKM----GFDRDVFVENCLINFYGECGDIVDG 192
           D+FT+  VL+AC  +  F  G QVH  I++       D  + V N L   Y +CG + + 
Sbjct: 290 DEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEA 349

Query: 193 RRV-------------------------------FDEMSERNVVSWTSLICACARRDLPK 221
           R+V                               F+EM ERN+++WT +I   A+    +
Sbjct: 350 RQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGE 409

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           E++ LF  M  EG +P        I ACA L  L  G ++ A +  LG  ++    NAL+
Sbjct: 410 ESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALI 469

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            MY KCG V+ A  LF      + V  N +++   + G   +AL + + ML     PDR+
Sbjct: 470 TMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRI 529

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC------NTMIDMYMKCGKQEMAC 395
           T L+ +S  +  G +  G   H Y     + G   IC        MID+  + GK   A 
Sbjct: 530 TFLTVLSTCSHAGLVEEG---HRYF--KSMSGLYGICPGEDHYARMIDLLCRAGKFSEAK 584

Query: 396 RIFDHMSNKTVVS-WNSLIAGLIKNGD----VESAREVFSEMPGRD 436
            + + M  +     W +L+AG   +G+    +++A  +F  MP  D
Sbjct: 585 DMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHD 630



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 145/363 (39%), Gaps = 59/363 (16%)

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
            R  H +++ +G +    I N +ID+Y K      A  +FD +    +V+  +LIA    
Sbjct: 34  ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93

Query: 419 NGDVESAREVFSEMPG--RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            G+   ARE+F   P   RD + +N M+ G +  N    A+ELFR +L    + D  T  
Sbjct: 94  AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153

Query: 477 GVASACGYLGALDL-------AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR---- 525
            V      LGAL L        + I+  + K+G      +  AL+ +F +C         
Sbjct: 154 SV------LGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSS 207

Query: 526 -----AMQVFRRMEKRD-------------------------------VSAWTAAIGAMA 549
                A ++F  M +RD                               V AW A I    
Sbjct: 208 SLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYV 267

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG--WHLFRSMTDIH-GVS 606
             G   +A+E+F +M   GI+ D   +  VL+AC++ G    G   H +   T+    + 
Sbjct: 268 HHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLD 327

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
             +     +  L  + G + EA  +   MPV+ + V W ++L+       +D A    E 
Sbjct: 328 FSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRIDEAKSFFEE 386

Query: 667 ITE 669
           + E
Sbjct: 387 MPE 389


>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 742

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 287/817 (35%), Positives = 430/817 (52%), Gaps = 87/817 (10%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPS--YISKVVCTCAQMGTFESLTYAQKAFD 91
           P+ GS++    L+ L      +L     H PS  ++   + +C        L YA   FD
Sbjct: 7   PTPGSVRQATELHALVTTSGRLL-----HPPSAAHLLNSLTSCISPSDPLHLRYALSLFD 61

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGILPDKFTFPFVLNACTK 150
                     + F++++ +R       G +  I LY  + G  + PD FTF F+   C +
Sbjct: 62  ------RMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCAR 115

Query: 151 SSAFGE-GVQVHGAIVKMGFDRDV-FVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
             A    G  +H A  +      V  + + +I+ Y E G                     
Sbjct: 116 GGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELG--------------------- 154

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
                     LP +A   F    +E    + V    VIS  AK+                
Sbjct: 155 ----------LPGDARRAF----DEASVKDVVAWTTVISGLAKM---------------- 184

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
                              G +D A++L      RN+V    ++S Y R G A EA+   
Sbjct: 185 -------------------GLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCF 225

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
           + ML  G  PD VT++  +SA  QL DL  G   H  V    +   D +   +IDMY KC
Sbjct: 226 NSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKC 285

Query: 389 GKQEMACRIFDHMSN-KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           G    A  +FD +   +    WN++I G  K G V+ AR +F +M   D I++N+++ G 
Sbjct: 286 GDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGY 345

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
                  EA+ LF  M    +  D  TMVG+ +A   LGAL   + ++A IE+  +  D+
Sbjct: 346 IHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDV 405

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            L TAL+DM+ +CG  + AM  F++M  RDV  W+A IG +A  G G+ A+E F  M   
Sbjct: 406 YLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCD 465

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G   +S+ ++ VLTACSH  L+++G   F  M  +H + PQI HYGCM+DLLGR+GLL E
Sbjct: 466 GFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDE 525

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A+DL+++MP++PN VIW S+L+AC+ H+NVD+A  AA  + +L+P +  V+V + NIY  
Sbjct: 526 AMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYID 585

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
           + +W + +++R  M+++G++K  G SSI V G+VH+F  GD SHP++  I  M+ E+  R
Sbjct: 586 SRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRR 645

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           L+ AGY P  + + +DVDE+EK+  L  HSEKLA+AFGL+S +  +P+ ++KNLR+C DC
Sbjct: 646 LKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDC 705

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           HS  KL+S++++REIIVRD +RFH FR G CSC+DFW
Sbjct: 706 HSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 250/714 (35%), Positives = 408/714 (57%), Gaps = 38/714 (5%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI  D F    + +A  K+    +  Q+H  ++ +G     F+   LI+     GDI   
Sbjct: 17  GIHSDSFYASLIDSATHKA----QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R+VFD++    +  W ++I   +R +  ++A+ ++  M    + P+S T   ++ AC+ L
Sbjct: 73  RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNT 310
            +L++G  V A +  LG  A+  + N L+ +Y KC  + +A+ +F      +R +V    
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           I+S Y + G   EAL I   M     +PD V ++S ++A   L DL  GR  H  V++ G
Sbjct: 193 IVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           LE    +  ++  MY KCG+                               V +A+ +F 
Sbjct: 253 LEIEPDLLISLNTMYAKCGQ-------------------------------VATAKILFD 281

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
           +M   + I WN M+ G  +     EA+++F  M+++ ++ D +++    SAC  +G+L+ 
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
           A+ +Y Y+ ++    D+ +++AL+DMFA+CG  + A  VF R   RDV  W+A I    +
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G   +A+ L+  M R G+ P+ + F+G+L AC+H G+V +GW  F  M D H ++PQ  
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQ 460

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           HY C++DLLGRAG L +A ++IK MPV+P   +WG+LL+AC+KH++V++  YAA+++  +
Sbjct: 461 HYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI 520

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           DP  +G +V LSN+YA+A  W  VA VR++MKE+G+ K  G S +EV G++  F  GD+S
Sbjct: 521 DPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKS 580

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           HP    I   +  +  RL++ G+V +    L D++++E +  L  HSE++A+A+GLIST 
Sbjct: 581 HPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTP 640

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  P+R+ KNLR C +CH+  KL+SK+ DREI+VRD NRFH F+ G CSC D+W
Sbjct: 641 QGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/539 (30%), Positives = 270/539 (50%), Gaps = 48/539 (8%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           LA+P + T +  H       DS     + +     +LKQ H  +L  GL      I+K++
Sbjct: 7   LASPLLYTNSGIHS------DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI 60

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
              +  G    +T+A++ FD     +     +F +N++IRGYS      +A+ +Y  +  
Sbjct: 61  HASSSFG---DITFARQVFD-----DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
             + PD FTFP +L AC+  S    G  VH  + ++GFD DVFV+N LI  Y +C  +  
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172

Query: 192 GRRVFD--EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            R VF+   + ER +VSWT+++ A A+   P EA+ +F  M +  +KP+ V +V V++A 
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAF 232

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             LQ+L+ G  + A + ++G++    ++ +L  MY KCG V TAK LF + K  NL+L N
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++S Y + G AREA+ +  EM+    RPD +++ SA+SA AQ+G L   R  + YV R+
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
                  I + +IDM+ KCG  E A  +FD   ++ VV W+++I G   +G         
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRA------- 405

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                    EA+ L+R M    +  + VT +G+  AC + G + 
Sbjct: 406 ------------------------REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              W +  +  + I+   Q    ++D+  R G   +A +V + M  +  V+ W A + A
Sbjct: 442 EGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 8/184 (4%)

Query: 474 TMVGVASACGYLGALDLA------KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           T  G+ S   Y   +D A      K I+A +   G+     L T L+   +  GD   A 
Sbjct: 14  TNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFAR 73

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           QVF  + +  +  W A I   +   + + A+ +++ M    + PDS  F  +L ACS   
Sbjct: 74  QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGS 646
            +  G  +   +  + G    +     ++ L  +   LG A  + + +P+    ++ W +
Sbjct: 134 HLQMGRFVHAQVFRL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192

Query: 647 LLAA 650
           +++A
Sbjct: 193 IVSA 196


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 440/801 (54%), Gaps = 40/801 (4%)

Query: 48  LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF---ESLTYAQKAFDYYIKDNETSATLF 104
           LK   C     GL  K  Y+S V    + +G +     L  A++ FD   +  +  +   
Sbjct: 229 LKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVS--- 285

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +NS+I  YS  G  +EA+ L+ E+    + P+ +TF   L AC  SS   +G+ +H  +
Sbjct: 286 -WNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 344

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           +K  +  +VFV N LI  Y   G + +   +F  M + + +SW S++    +  L  EA+
Sbjct: 345 LKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEAL 404

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             + EM + G KP+ V ++ +I+A A+  N   G ++ AY  + G+ ++  + N+LVDMY
Sbjct: 405 QFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMY 464

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            K  ++     +F +  D+++V   TI++ + + G    AL +  E+ L G   D + + 
Sbjct: 465 AKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMIS 524

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A + L  +   +  H Y++R GL     + N ++D+Y +CG  + A R+F+     
Sbjct: 525 SILLACSGLKLISSVKEIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARMFE----- 578

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                      LI+  DV               +SW +M+       +  EA+ELF +M 
Sbjct: 579 -----------LIEFKDV---------------VSWTSMISCYVHNGLANEALELFHLMK 612

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              ++ D +++V + SA   L AL   K I+ ++ + G   +  LA+ LVDM+ARCG  +
Sbjct: 613 ETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLE 672

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
           ++  VF  +  +D+  WT+ I A  M G G  A++LF  M  + I PD I FV VL ACS
Sbjct: 673 KSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACS 732

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GL+N+G     SM   + + P   HY C+VDLLGRA  L EA   +K M VEP   +W
Sbjct: 733 HSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVW 792

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LL ACQ H N ++   AA+++ E+DPE  G +VL+SN+YA+  +W +V  VR++MK  
Sbjct: 793 CALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKAS 852

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL-RDAGYVPDLTNVLLD 763
           G++K PG S IEV  KVH F + D+SHP+   I S L ++  +L ++ GYV     VL +
Sbjct: 853 GLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHN 912

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
             E+EK  +L  HSE+LA+A+G+++T +   +R+ KNLR+C DCH+F KL+SK ++RE++
Sbjct: 913 AKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELV 972

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           +RD NRFH F+ G CSC D W
Sbjct: 973 MRDANRFHHFKGGVCSCGDVW 993



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 191/645 (29%), Positives = 314/645 (48%), Gaps = 77/645 (11%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           K L+E +Q H H++         ++S ++V    + G    L  A+K FD          
Sbjct: 128 KALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGC---LVDAEKLFD-----GMPHK 179

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T+F +N++I  Y   G  + ++ LY E+   GI  D  TFP +L AC        G +VH
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICACARRDLP 220
           G  +K G+   VFV N ++  Y +C D+   R++FD M E+ +VVSW S+I A +     
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 299

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
            EA+ LF EM +  + PN+ T V  + AC     ++ G  + A + +     N  + NAL
Sbjct: 300 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 359

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           + MY + G +  A  +F    D + +  N+++S +V+ GL  EAL    EM   G +PD 
Sbjct: 360 IAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDL 419

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK-CGKQEMACRIFD 399
           V ++S ++ASA+ G+ L G   H Y ++NGL+    + N+++DMY K C  + M C IFD
Sbjct: 420 VAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC-IFD 478

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M +K VVSW ++IAG  +NG                                   A+EL
Sbjct: 479 KMPDKDVVSWTTIIAGHAQNGS-------------------------------HSRALEL 507

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           FR +  E I +D + +  +  AC  L  +   K I++YI + G+  D+ L   +VD++  
Sbjct: 508 FREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGE 566

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG+   A ++F  +E +DV +WT+ I      G   +A+ELF+ M   G++PDSI  V +
Sbjct: 567 CGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 626

Query: 580 LTACS-----------HGGLVNQGW----HLFRSMTDIHG---------------VSPQI 609
           L+A +           HG L+ +G+     L  ++ D++                 +  +
Sbjct: 627 LSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL 686

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAAC 651
           V +  M++  G  G    A+DL + M    + P+ + + ++L AC
Sbjct: 687 VLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYAC 731



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 249/534 (46%), Gaps = 53/534 (9%)

Query: 136 PDKFT----FPFVLNACTKSSAFGEGVQVHG-AIVKMGFDRDVFVENCLINFYGECGDIV 190
           P +F+    +  VL  C    A  EG QVH   I        VF+   L+  YG+CG +V
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           D  ++FD M  + + +W ++I A      P  ++ L+ EM   GI  ++ T  C++ AC 
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 227

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR-NLVLCN 309
            L++   G  V     + G  +   + N++V MY KC  ++ A+QLF    ++ ++V  N
Sbjct: 228 LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 287

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           +++S Y   G + EAL +  EM      P+  T ++A+ A      +  G   H  VL++
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 347

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
                  + N +I MY + GK   A  IF +M +   +SWNS+++G ++NG         
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNG--------- 398

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                 ++ EA++ +  M     K D V ++ + +A    G   
Sbjct: 399 ----------------------LYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTL 436

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
               I+AY  KNG+  D+Q+  +LVDM+A+    +    +F +M  +DV +WT  I   A
Sbjct: 437 NGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHA 496

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH------ 603
             G+  +A+ELF E+  +GI  D ++   +L ACS       G  L  S+ +IH      
Sbjct: 497 QNGSHSRALELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRK 549

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           G+S  ++  G +VD+ G  G +  A  + +   +E  DV+  + + +C  H  +
Sbjct: 550 GLSDLVLQNG-IVDVYGECGNVDYAARMFE--LIEFKDVVSWTSMISCYVHNGL 600



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 131/348 (37%), Gaps = 59/348 (16%)

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY-IEKNGIHCDMQLAT 511
           F+   +LF      +  +D      V   CG   AL   + ++A+ I  N +   + L+T
Sbjct: 96  FQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLST 154

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
            LV M+ +CG    A ++F  M  + +  W A IGA    G    ++EL+ EM   GI  
Sbjct: 155 RLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPL 214

Query: 572 DSIVFVGVLTACS-----------HGGLVNQGW-----------HLFRSMTDIHGVS--- 606
           D+  F  +L AC            HG  + +G+            ++    D++G     
Sbjct: 215 DACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLF 274

Query: 607 ---PQ---IVHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNV 657
              P+   +V +  M+      G   EAL L   M    + PN   + + L AC+    +
Sbjct: 275 DRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFI 334

Query: 658 DIAAYAAERITELDPEKSGVHVLLSN----IYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
               +    + +       ++V ++N    +YA  GK    A +   M +          
Sbjct: 335 KQGMFIHATVLK---SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDW--------D 383

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           +I  N  +  F      H  +     M        RDAG  PDL  V+
Sbjct: 384 TISWNSMLSGFVQNGLYHEALQFYHEM--------RDAGQKPDLVAVI 423


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/639 (38%), Positives = 384/639 (60%), Gaps = 11/639 (1%)

Query: 217 RDLPK----EAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
           RDL +     A  LF++ +   G + +  + + ++ A +K+  L  G  +     ++   
Sbjct: 84  RDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATL 143

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            +  +    +DMY  CG ++ A+ +F E   R++V  NT++  Y R GL  EA  + +EM
Sbjct: 144 CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
                 PD + + + VSA  + G++   R  + +++ N +     +   ++ MY   G  
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           +MA   F  MS + +    ++++G  K G ++ A+ +F +   +D + W TM+    + +
Sbjct: 264 DMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESD 323

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
             +EA+ +F  M    IK D V+M  V SAC  LG LD AKW+++ I  NG+  ++ +  
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINN 383

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL++M+A+CG       VF +M +R+V +W++ I A++M G    A+ LF  M ++ ++P
Sbjct: 384 ALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP 443

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           + + FVGVL  CSH GLV +G  +F SMTD + ++P++ HYGCMVDL GRA LL EAL++
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEV 503

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I+SMPV  N VIWGSL++AC+ H  +++  +AA+RI EL+P+  G  VL+SNIYA   +W
Sbjct: 504 IESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRW 563

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
            +V  +R  M+E+ + K  G S I+ NGK HEF  GD+ H + N I + L E+  +L+ A
Sbjct: 564 EDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLA 623

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP------IRVVKNLRLCC 805
           GYVPD  +VL+DV+E+EKK L+  HSEKLA+ FGL++  K         IR+VKNLR+C 
Sbjct: 624 GYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCE 683

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCH F KLVSKVY+REIIVRD  RFH ++ G CSC D+W
Sbjct: 684 DCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 254/550 (46%), Gaps = 71/550 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L  CK+LN +KQ H HIL+  + HK   ++  +   +   +  +L+YA   F       E
Sbjct: 19  LSFCKSLNHIKQLHAHILRTVINHK---LNSFLFNLSVSSSSINLSYALNVFSSIPSPPE 75

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           +     ++N  +R  S        I  Y  +   G   D+F+F  +L A +K SA  EG+
Sbjct: 76  S----IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGM 131

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++HG   K+    D FVE   ++ Y  CG I   R VFDEMS R+VV+W ++I    R  
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           L  EA  LF EM +  + P+ + +  ++SAC +  N+     +  ++ E  ++ +  ++ 
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251

Query: 279 ALVDMYM-------------------------------KCGAVDTAKQLFGECKDRNLVL 307
           ALV MY                                KCG +D A+ +F + + ++LV 
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
             T++S YV     +EAL + +EM   G +PD V+M S +SA A LG L   +  H  + 
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            NGLE   SI N +I+MY KCG  +    +F+ M  + VVSW+S+I  L  +G+      
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEA----- 426

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                                      +A+ LF  M  E ++ + VT VGV   C + G 
Sbjct: 427 --------------------------SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGL 460

Query: 488 LDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
           ++  K I+A + ++  I   ++    +VD+F R    + A++V   M    +V  W + +
Sbjct: 461 VEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLM 520

Query: 546 GAMAMEGNGE 555
            A  + G  E
Sbjct: 521 SACRIHGELE 530



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 195/424 (45%), Gaps = 55/424 (12%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           + YA+  FD       +   +  +N++I  Y   GL  EA  L+ E+    ++PD+    
Sbjct: 162 INYARNVFD-----EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216

Query: 143 FVLNACTKSSAFGEGVQVHGAIV--------------------------------KMGFD 170
            +++AC ++        ++  ++                                KM   
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV- 275

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R++FV   +++ Y +CG + D + +FD+  ++++V WT++I A    D P+EA+ +F EM
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
              GIKP+ V+M  VISACA L  L+    V + I   G+++   + NAL++MY KCG +
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV--- 347
           D  + +F +   RN+V  +++++     G A +AL++   M      P+ VT +  +   
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455

Query: 348 --SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NK 404
             S   + G  +   M   Y +   LE +      M+D++ +      A  + + M    
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHY----GCMVDLFGRANLLREALEVIESMPVAS 511

Query: 405 TVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLGGL-TQENMFEEAMEL 459
            VV W SL++    +G++E    +A+ +    P  DH     ++  +  +E  +E+   +
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELEP--DHDGALVLMSNIYAREQRWEDVRNI 569

Query: 460 FRVM 463
            RVM
Sbjct: 570 RRVM 573


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 270/764 (35%), Positives = 426/764 (55%), Gaps = 37/764 (4%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+ AFD   + N     L+ +  L+  ++  G   E +     +   G+ PD  TF   L
Sbjct: 98  AKAAFDALEQRN-----LYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNV 204
            +C    +  +G+++H  +V    + D  V N L+N Y +CG +   +RVF +M   RNV
Sbjct: 153 GSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNV 212

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +SW+ +  A A      EA+  F  M+  GIK     MV ++SAC+    ++ G  + + 
Sbjct: 213 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSC 272

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNTIMSNYVRLGLAR 322
           I   G ++  L+ NA++ MY +CGAV+ A+++F    +  R++V  N ++S YV     +
Sbjct: 273 IALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGK 332

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +A+ +   M L   R D+VT +S +SA +   D+  GR+ H  ++ + LE    + N ++
Sbjct: 333 DAIQLYQRMQL---RADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALV 389

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY KCG    A  +FD M  ++++SW ++I+  ++   V  A  +F +M          
Sbjct: 390 SMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM---------- 439

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
                         +EL +   S+R+K D +  V + +AC  + AL+  K +       G
Sbjct: 440 --------------LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCG 485

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAMAMEGNGEQAVELF 561
           +  D  + TA+V+++ +CG+ +   ++F  +  R DV  W A I   A  G   +A++LF
Sbjct: 486 LSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLF 545

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM-TDIHGVSPQIVHYGCMVDLLG 620
             M  +G++PDS  FV +L ACSH GL +QG   F SM T+   V+  I H+GC+ DLLG
Sbjct: 546 WRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLG 605

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           R G L EA + ++ +PV+P+ V W SLLAAC+ H+++  A   A ++  L+P  +  +V 
Sbjct: 606 RGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVA 665

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSNIYA   KW  VA+VR  M EQG++K  G S+IE+   +H+F +GD++HP    I   
Sbjct: 666 LSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREE 725

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L +++ ++++ GYVPD   VL  VDEQEK+ LL  HSE+LA+A GLIST    P+RV KN
Sbjct: 726 LAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKN 785

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH+  KL+SK+  R+I+VRD  RFH F+ G CSC D+W
Sbjct: 786 LRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 261/540 (48%), Gaps = 52/540 (9%)

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCLINF 182
           S  ++L    +  +  T+  +L  C ++ A  EG ++H   VK      ++ + N +++ 
Sbjct: 29  SAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSM 88

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y  C    D +  FD + +RN+ SWT L+ A A     KE +     M ++G++P++VT 
Sbjct: 89  YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 148

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC-K 301
           +  + +C   ++L  G R+   + +  ++ +  + NAL++MY KCG++  AK++F +  +
Sbjct: 149 ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 208

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR---VTMLSAVSASAQLGDLLC 358
            RN++  + +   +   G   EAL     MLL G +  +   VT+LSA S+ A + D   
Sbjct: 209 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD--- 265

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN--KTVVSWNSLIAGL 416
           GR+ H  +  +G E    + N ++ MY +CG  E A ++FD M    + VVSWN +++  
Sbjct: 266 GRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAY 325

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
           + N              G+D                   A++L++ M   +++ D+VT V
Sbjct: 326 VHNDR------------GKD-------------------AIQLYQRM---QLRADKVTYV 351

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            + SAC     + L + ++  I  + +  ++ +  ALV M+A+CG    A  VF +ME+R
Sbjct: 352 SLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQR 411

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLR-------QGIKPDSIVFVGVLTACSHGGLV 589
            + +WT  I A        +A  LF +ML        Q +KPD++ FV +L AC+    +
Sbjct: 412 SIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSAL 471

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            QG  +        G+S        +V+L G+ G + E   +   +   P+  +W +++A
Sbjct: 472 EQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA 530


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 294/840 (35%), Positives = 450/840 (53%), Gaps = 72/840 (8%)

Query: 6   NPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPS 65
           N SP     P       Q K KTT K SP I   ++  +   L +P+             
Sbjct: 16  NASPEQNKPPKAA----QFKRKTTRK-SPFIKRAQSKTSFKPLARPN-----------DL 59

Query: 66  YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
            I++ +C   + G   +      A D + K N +    F++N +IRGY+  GL  EAI  
Sbjct: 60  NITRDLCGFVESGLMGN------ALDMFEKMNHSDT--FIWNVIIRGYTNNGLFQEAIDF 111

Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           Y  +   GI  D FTFPFV+ AC +  A   G +VHG ++K+GFD DV+V N LI+ Y +
Sbjct: 112 YYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLK 171

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
            G I    +VFDEM  R++VSW S++           ++  F EM+  G K +   M+  
Sbjct: 172 IGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISA 231

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           + AC+    L  G  +   +    ++ + ++  +L+DMY KCG VD A+++F     +N+
Sbjct: 232 LGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNI 291

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  N ++      G+  +   I          PD +TM++ + + +Q G LL G+  HG+
Sbjct: 292 VAWNAMIG-----GMQEDDKVI----------PDVITMINLLPSCSQSGALLEGKSIHGF 336

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
            +R     +  +   ++DMY KCG+ ++A  +F+ M+ K +VSWN+++A  ++N      
Sbjct: 337 AIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQN------ 390

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                      ++EA+++F+ +L+E +K D +T+  V  A   L
Sbjct: 391 -------------------------EQYKEALKMFQHILNEPLKPDAITIASVLPAVAEL 425

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
            +    K I++YI K G+  +  ++ A+V M+A+CGD Q A + F  M  +DV +W   I
Sbjct: 426 ASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMI 485

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
            A A+ G G  +++ F+EM  +G KP+   FV +LTACS  GL+++GW  F SM   +G+
Sbjct: 486 MAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGI 545

Query: 606 SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAE 665
            P I HYGCM+DLLGR G L EA   I+ MP+ P   IWGSLLAA + H +V +A  AA 
Sbjct: 546 DPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAAR 605

Query: 666 RITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFT 725
            I  L  + +G +VLLSN+YA AG+W +V R++  MKEQG+ K  G S +++NG+   F 
Sbjct: 606 HILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFI 665

Query: 726 SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL-LDVDEQEKKYLLSHHSEKLAMAF 784
           + D SH   N I  +L  +  ++ +  Y+  LT    LDV  +++     +HS KLA+ F
Sbjct: 666 NQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDV-AKKRGNSPEYHSVKLAICF 724

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GLIST+   P+ V KN R+C DCH  AK +S+V  REI+V D   FH FR G CSC D+W
Sbjct: 725 GLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/685 (36%), Positives = 387/685 (56%), Gaps = 67/685 (9%)

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           F  +    V++W S+I     + L  +A+  F EM   G  P+      V+ +C  + +L
Sbjct: 62  FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKC---------------------------- 287
             G+ V  +I  LGM  +    NAL++MY K                             
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181

Query: 288 --------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
                     +D+ +++F     +++V  NTI++ Y + G+  +AL ++ EM     +PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T+ S +   ++  D++ G+  HGYV+R G++    I ++++DMY K  +         
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR--------- 292

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                 +E +  VFS +  RD ISWN+++ G  Q   + EA+ L
Sbjct: 293 ----------------------IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRL 330

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           FR M++ ++K   V    V  AC +L  L L K ++ Y+ + G   ++ +A+ALVDM+++
Sbjct: 331 FRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK 390

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG+ + A ++F RM   D  +WTA I   A+ G+G +AV LF EM RQG+KP+ + FV V
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           LTACSH GLV++ W  F SMT ++G++ ++ HY  + DLLGRAG L EA + I  M VEP
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
              +W +LL++C  H+N+++A   AE+I  +D E  G +VL+ N+YAS G+W  +A++RL
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRL 570

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
           +M+++G+RK P  S IE+  K H F SGD SHP M+ I+  L+ +  ++   GYV D + 
Sbjct: 571 RMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSG 630

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           VL DVDE+ K+ LL  HSE+LA+AFG+I+T     IRV KN+R+C DCH   K +SK+ +
Sbjct: 631 VLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITE 690

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           REIIVRDN+RFH F +G+CSC D+W
Sbjct: 691 REIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 232/497 (46%), Gaps = 71/497 (14%)

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           S  +  + S+IR ++   L  +A++ +VE+   G  PD   FP VL +CT       G  
Sbjct: 67  SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGE---------CGDIVDG------------------ 192
           VHG IV++G D D++  N L+N Y +          G++ D                   
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186

Query: 193 ---------RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
                    RRVF+ M  ++VVS+ ++I   A+  + ++A+ +  EM    +KP+S T+ 
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
            V+   ++  ++  G  +  Y+   G+ ++  + ++LVDMY K   ++ ++++F     R
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           + +  N++++ YV+ G   EAL +  +M+    +P  V   S + A A L  L  G+  H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
           GYVLR G      I + ++DMY KCG  + A +IFD M+    VSW ++I G        
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG-------- 418

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
                   + G  H                 EA+ LF  M  + +K ++V  V V +AC 
Sbjct: 419 ------HALHGHGH-----------------EAVSLFEEMKRQGVKPNQVAFVAVLTACS 455

Query: 484 YLGALDLAKWIY--AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSA 540
           ++G +D A W Y  +  +  G++ +++   A+ D+  R G  + A     +M  +   S 
Sbjct: 456 HVGLVDEA-WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514

Query: 541 WTAAIGAMAMEGNGEQA 557
           W+  + + ++  N E A
Sbjct: 515 WSTLLSSCSVHKNLELA 531



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 168/329 (51%), Gaps = 10/329 (3%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN++I GY+  G+  +A+ +  E+    + PD FT   VL   ++     +G ++HG ++
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + G D DV++ + L++ Y +   I D  RVF  +  R+ +SW SL+    +     EA+ 
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF +MV   +KP +V    VI ACA L  L LG ++  Y+   G  +N  + +ALVDMY 
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +  A+++F      + V    I+  +   G   EA+++ +EM   G +P++V  ++
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449

Query: 346 AVSASAQLG--DLLCG---RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            ++A + +G  D   G    M   Y L   LE + ++     D+  + GK E A      
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA----DLLGRAGKLEEAYNFISK 505

Query: 401 MSNKTVVS-WNSLIAGLIKNGDVESAREV 428
           M  +   S W++L++    + ++E A +V
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLELAEKV 534



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 176/380 (46%), Gaps = 7/380 (1%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           ++ +Y     +  A  LF   K   ++   +++  +    L  +ALA   EM   G  PD
Sbjct: 45  VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC---GKQEMACR 396
                S + +   + DL  G   HG+++R G++      N +++MY K    G +     
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164

Query: 397 IFDHMSNKTVVSWNSLIAG--LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
           +FD M  +T  S +  +     I    ++S R VF  MP +D +S+NT++ G  Q  M+E
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           +A+ + R M +  +K D  T+  V         +   K I+ Y+ + GI  D+ + ++LV
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+A+    + + +VF R+  RD  +W + +      G   +A+ LF +M+   +KP ++
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F  V+ AC+H   ++ G  L   +    G    I     +VD+  + G +  A  +   
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 635 MPVEPNDVIWGSLLAACQKH 654
           M V  ++V W +++     H
Sbjct: 404 MNV-LDEVSWTAIIMGHALH 422


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/765 (35%), Positives = 425/765 (55%), Gaps = 40/765 (5%)

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNA 147
           AF  +     +   +  Y+S+I  ++     ++A+ ++ +L    G+ P+++ F  V+ A
Sbjct: 106 AFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRA 165

Query: 148 CTKSSAFGEGVQVHGAIVKMG-FDRDVFVENCLINFYGE---CGDIVDGRRVFDEMSERN 203
           C K   F  G+ + G ++K G FD  V V   LI+ + +     D+   R+VFD+M E+N
Sbjct: 166 CLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKN 225

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           VV+WT +I   A+     EA+ LF EM V  G  P+  T+  +IS CA++Q L LG  + 
Sbjct: 226 VVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELH 285

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG--L 320
           +++   G+  +  +  +LVDMY KCG V  A+++F   ++ N++    +++ YVR G   
Sbjct: 286 SWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGY 345

Query: 321 AREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
            REA+ +   MLL G   P+  T    + A A L D   G   HG  ++ GL   D + N
Sbjct: 346 EREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGN 405

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++ +Y K G+                               +ESAR+ F  +  ++ +S
Sbjct: 406 GLVSVYAKSGR-------------------------------MESARKCFDVLFEKNLVS 434

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
              +     ++       +L R +      V   T   + S    +G +   + I+A + 
Sbjct: 435 ETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVV 494

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G   D+ +  AL+ M+++CG+ + A+QVF  ME  +V  WT+ I   A  G   +A+E
Sbjct: 495 KIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALE 554

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF  ML  G+KP+ + ++ VL+ACSH GL+++ W  F SM D HG+ P++ HY CMVDLL
Sbjct: 555 LFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLL 614

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GR+GLL EA++ I SMP + + ++W + L +C+ H+N  +  +AA+ I E +P     ++
Sbjct: 615 GRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYI 674

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN+YA+ G+W +VA +R  MK++ I K  GSS IEV  +VH+F  GD  HP+   I  
Sbjct: 675 LLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYE 734

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L E+  ++++ GYVP+   VL DV++++K+  L  HSEKLA+AF LIST    PIRV K
Sbjct: 735 KLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFK 794

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+  K +S V  REI+VRD NRFH  + G+CSC+D+W
Sbjct: 795 NLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 246/540 (45%), Gaps = 54/540 (10%)

Query: 59  GLGHKPSYISKVVCT-CAQMGTF------ESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           G   K  Y    VC  C  +  F        L  A+K FD   + N  + TL     +I 
Sbjct: 180 GFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTL-----MIT 234

Query: 112 GYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFD 170
             +  G   EAI L++E L   G +PD+FT   +++ C +      G ++H  +++ G  
Sbjct: 235 RLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLV 294

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR--RDLPKEAVYLFF 228
            D+ V   L++ Y +CG + + R+VFD M E NV+SWT+L+    R      +EA+ +F 
Sbjct: 295 LDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFS 354

Query: 229 EM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            M ++ G+ PN  T   V+ ACA L + + G++V     +LG+ A   + N LV +Y K 
Sbjct: 355 NMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKS 414

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +++A++ F    ++NLV    +    V+         +  E+   G      T  S +
Sbjct: 415 GRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLL 474

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           S +A +G +  G   H  V++ G     S+ N +I MY KCG +E A ++F+ M +  V+
Sbjct: 475 SGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVI 534

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           +W S+I G  K+G                                  +A+ELF  ML   
Sbjct: 535 TWTSIINGFAKHG-------------------------------FASKALELFYNMLETG 563

Query: 468 IKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
           +K + VT + V SAC ++G +D A K   +  + +GI   M+    +VD+  R G    A
Sbjct: 564 VKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEA 623

Query: 527 MQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
           ++    M    D   W   +G+  +  N   GE A ++  E  R+   P + + +  L A
Sbjct: 624 IEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILE--REPHDPATYILLSNLYA 681



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 128/554 (23%), Positives = 245/554 (44%), Gaps = 71/554 (12%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L  C ++     G  +H  +       D  + N LI  Y +  D +    +F  M
Sbjct: 54  TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113

Query: 200 --SERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLE 256
             S+R+VVS++S+I   A      +AV +F +++ ++G+ PN      VI AC K    +
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173

Query: 257 LGDRVCAYIDELGMKANALMVN-ALVDMYMK-CGAVD--TAKQLFGECKDRNLVLCNTIM 312
            G  +  ++ + G   + + V   L+DM++K C   D  +A+++F + +++N+V    ++
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233

Query: 313 SNYVRLGLAREALAILDEMLL-HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +   + G   EA+ +  EML+  G  PDR T+   +S  A++  L  G+  H +V+R+GL
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
                +  +++DMY KCG  + A ++FD M    V+SW +L+ G ++ G           
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGG----------- 342

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDL 490
                        GG  +     EAM +F  ML +  +  +  T  GV  AC  L   D 
Sbjct: 343 -------------GGYER-----EAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDF 384

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            + ++    K G+     +   LV ++A+ G  + A + F  + ++++ + T        
Sbjct: 385 GEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVK 444

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL--------FRSMTDI 602
           + N     +L  E+   G    S  +  +L+  +  G + +G  +        FR+   +
Sbjct: 445 DFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSV 504

Query: 603 HGV----------------------SPQIVHYGCMVDLLGRAGLLGEALDLIKSM---PV 637
           +                           ++ +  +++   + G   +AL+L  +M    V
Sbjct: 505 NNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGV 564

Query: 638 EPNDVIWGSLLAAC 651
           +PNDV + ++L+AC
Sbjct: 565 KPNDVTYIAVLSAC 578



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 172/357 (48%), Gaps = 44/357 (12%)

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG- 298
           +T   ++  C + +N  LG  +   +    +  + L++N+L+ +Y K     TA  +F  
Sbjct: 53  ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112

Query: 299 -ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDL 356
            E   R++V  ++I+S +       +A+ + D++LL  G  P+     + + A  + G  
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172

Query: 357 LCGRMCHGYVLRNGLEGWDS-ICN--TMIDMYMK---CGKQEMACRIFDHMSNKTVVSWN 410
             G    G+VL+ G   +DS +C    +IDM++K       E A ++FD M  K VV+W 
Sbjct: 173 KTGLCLFGFVLKTGY--FDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWT 230

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
            +I  L + G  + A ++F EM                              ++S     
Sbjct: 231 LMITRLAQYGYNDEAIDLFLEM------------------------------LVSSGYVP 260

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           DR T+ G+ S C  +  L L K +++++ ++G+  D+ +  +LVDM+A+CG  Q A +VF
Sbjct: 261 DRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVF 320

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNG--EQAVELFNEMLRQ-GIKPDSIVFVGVLTACS 584
             M + +V +WTA +      G G   +A+ +F+ ML Q G+ P+   F GVL AC+
Sbjct: 321 DGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACA 377



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 119/220 (54%), Gaps = 13/220 (5%)

Query: 37  GSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           G LK C +L +    +Q H   +K GL       + +V   A+ G  ES   A+K FD  
Sbjct: 371 GVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMES---ARKCFDVL 427

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEA-ISLYVELAGFGILPDKFTFPFVLNACTKSS 152
            + N  S T+ + ++ ++ ++   L  E  +   VE  G G+    FT+  +L+      
Sbjct: 428 FEKNLVSETV-VDDTNVKDFN---LNSEQDLDREVEYVGSGV--SSFTYASLLSGAACIG 481

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
             G+G Q+H  +VK+GF  D+ V N LI+ Y +CG+     +VF++M + NV++WTS+I 
Sbjct: 482 TIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIIN 541

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             A+     +A+ LF+ M+E G+KPN VT + V+SAC+ +
Sbjct: 542 GFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHV 581


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 283/828 (34%), Positives = 450/828 (54%), Gaps = 50/828 (6%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTF 80
            ++K +P        +K C  L + +     +  IL+ G        + +V   ++MG  
Sbjct: 98  RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGL- 156

Query: 81  ESLTYAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
             L+ A++ FD   ++D      L  +NSLI GYS  G   EA+ +Y EL    I+PD F
Sbjct: 157 --LSRARQVFDEMPVRD------LVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSF 208

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   VL A        +G  +HG  +K G +    V N L+  Y +     D RRVFDEM
Sbjct: 209 TVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEM 268

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             R+ V++ ++IC   + ++ +E+V +F E +++  KP+ +T+  V+ AC  L++L L  
Sbjct: 269 VVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAK 327

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNTIMSNYVR 317
            +  Y+   G    + + N L+D+Y KCG + TA+ +F   ECKD   V  N+I+S Y++
Sbjct: 328 YIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDT--VSWNSIISGYIQ 385

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
            G   EA+ +   M++   + D +T L  +S S +L DL  G+  H   +++G+    S+
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSV 445

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N +IDMY KCG                               +V  + ++F+ M   D 
Sbjct: 446 SNALIDMYAKCG-------------------------------EVGDSLKIFNSMGTLDT 474

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           ++WNT++    +   F   +++   M   ++  D  T +     C  L A  L K I+  
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           + + G   ++Q+  AL++M+++CG  + + +VF RM +RDV  WT  I A  M G GE+A
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +E F +M + GI PDS+VF+ ++ ACSH GLV +G   F  M   + + P I HY C+VD
Sbjct: 595 LESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVD 654

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LL R+  + +A + I++MP+EP+  IW S+L AC+   +++ A   + RI EL+P+  G 
Sbjct: 655 LLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGY 714

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
            +L SN YA+  KW  V+ +R  ++++ I+K PG S IE+  KVH F SGD+S P+   I
Sbjct: 715 SILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAI 774

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDV-DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIR 796
              L  +   +   GY+PD   V  ++ +E+EK+ L+  HSE+LA+AFGL++T    P++
Sbjct: 775 HKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQ 834

Query: 797 VVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           V+KNLR+C DCH   KL+SK+  REI+VRD NRFH F+ G CSC D W
Sbjct: 835 VMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 275/547 (50%), Gaps = 39/547 (7%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L +   LNEL++ H  ++  GL     +  K++    +   F +   +   F    +  
Sbjct: 13  ALSSSSNLNELRRIHALVISLGLDGSDFFSGKLI---DKYSHFRAPASSLSVF----RRV 65

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
             +  ++++NS+IR +S  G   +A+  Y +L    + PDK+TFP V+ AC        G
Sbjct: 66  SPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             V+  I++MGF+ D++V N L++ Y   G +   R+VFDEM  R++VSW SLI   +  
Sbjct: 126 DLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSH 185

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
              +EA+ ++ E+    I P+S T+  V+ A A L  ++ G  +  +  + G+ + +++ 
Sbjct: 186 GYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVN 245

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N L+ MY+K      A+++F E   R+ V  NT++  Y++L +  E++ +  E  L   +
Sbjct: 246 NGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLEN-LDQFK 304

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD +T+ S + A   L DL   +  + Y+LR G     ++ N +ID+Y KCG    A  +
Sbjct: 305 PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDV 364

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F+ M  K  VSWNS+I+G I++GD+                                EAM
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDL-------------------------------MEAM 393

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           +LF++M+    + D +T + + S    L  L   K +++   K+GI+ D+ ++ AL+DM+
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMY 453

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG+   ++++F  M   D   W   I A    G+    +++  +M +  + PD   F+
Sbjct: 454 AKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFL 513

Query: 578 GVLTACS 584
             L  C+
Sbjct: 514 VTLPMCA 520



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 250/512 (48%), Gaps = 35/512 (6%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE- 201
           F+  A + SS   E  ++H  ++ +G D   F    LI+ Y           VF  +S  
Sbjct: 9   FISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPA 68

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           +NV  W S+I A ++     +A+  + ++ E  + P+  T   VI ACA L + E+GD V
Sbjct: 69  KNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
              I E+G +++  + NALVDMY + G +  A+Q+F E   R+LV  N+++S Y   G  
Sbjct: 129 YKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EAL I  E+      PD  T+ S + A A L  +  G+  HG+ L++G+     + N +
Sbjct: 189 EEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGL 248

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           + MY+K  +   A R+FD M  +  V++N++I G +K                       
Sbjct: 249 LAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLK----------------------- 285

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                     M EE++++F   L ++ K D +T+  V  ACG+L  L LAK+IY Y+ + 
Sbjct: 286 --------LEMVEESVKMFLENL-DQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRA 336

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G   +  +   L+D++A+CGD   A  VF  ME +D  +W + I      G+  +A++LF
Sbjct: 337 GFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
             M+    + D I ++ +++  +    +  G  L  +     G+   +     ++D+  +
Sbjct: 397 KMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIK-SGIYIDLSVSNALIDMYAK 455

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
            G +G++L +  SM    + V W ++++AC +
Sbjct: 456 CGEVGDSLKIFNSMGT-LDTVTWNTVISACVR 486



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 3/184 (1%)

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           RV+   ++ A      L+  + I+A +   G+      +  L+D ++    P  ++ VFR
Sbjct: 4   RVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFR 63

Query: 532 RMEK-RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           R+   ++V  W + I A +  G   +A+E + ++    + PD   F  V+ AC+      
Sbjct: 64  RVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            G  +++ + ++ G    +     +VD+  R GLL  A  +   MPV  + V W SL++ 
Sbjct: 124 MGDLVYKQILEM-GFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSLISG 181

Query: 651 CQKH 654
              H
Sbjct: 182 YSSH 185


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/551 (42%), Positives = 350/551 (63%), Gaps = 2/551 (0%)

Query: 296 LFGECKDR-NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           LF +  D+ N+   N++++   R G + EAL     M     +P+R T   A+ + + L 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           DL  GR  H   L  G E    + + ++DMY KCG+   A  +FD +S++ +VSW S+I 
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRV 473
           G ++N D   A  VF  M  RD ISWN+++    Q  M  E+ME+F  M+ +  I  + V
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T+  V  AC + G+  L K I+  + K G+  ++ + T+++DM+ +CG  + A + F RM
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
            +++V +W+A +    M G+ ++A+E+F EM   G+KP+ I FV VL ACSH GL+ +GW
Sbjct: 271 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW 330

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
           H F++M+    V P + HYGCMVDLLGRAG L EA DLIK M + P+ V+WG+LL AC+ 
Sbjct: 331 HWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRM 390

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H+NVD+   +A ++ ELDP+  G +VLLSNIYA AG+W +V R+R+ MK  G+ K PG S
Sbjct: 391 HKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFS 450

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            +++ G+VH F  GD  HP+   I   L +++ +L++ GYVPD+T+VL DV  +EK+ +L
Sbjct: 451 LVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVL 510

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
             HSEKLA+AFG+++T     I ++KNLR+C DCH+  K +SK+ DREI+VRD+ RFH F
Sbjct: 511 RVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHF 570

Query: 834 RQGSCSCSDFW 844
           R G CSC D+W
Sbjct: 571 RDGLCSCGDYW 581



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 210/434 (48%), Gaps = 58/434 (13%)

Query: 83  LTYAQKAFDYYIKDNETSATLF----------MYNSLIRGYSCIGLGVEAISLYVELAGF 132
           +T++ K +     +N    TLF           +NS+I   +  G  VEA+  +  +   
Sbjct: 11  ITFSWKIYRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKL 70

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
            + P++ TFP  + +C+       G Q H   +  GF+ D+FV + L++ Y +CG++ D 
Sbjct: 71  SLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDA 130

Query: 193 RRVFDEMSERNVVSWTSLICACARRD-------------------------------LPK 221
           R +FDE+S RN+VSWTS+I    + D                               +  
Sbjct: 131 RTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMST 190

Query: 222 EAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           E++ +F  MV++G I  N+VT+  V+ ACA   +  LG  +   + ++G+++N  +  ++
Sbjct: 191 ESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSI 250

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           +DMY KCG V+ A++ F   +++N+   + +++ Y   G A+EAL +  EM + G +P+ 
Sbjct: 251 IDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNY 310

Query: 341 VTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           +T +S ++A +  G L  G      M H + +  G+E +      M+D+  + G  + A 
Sbjct: 311 ITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY----GCMVDLLGRAGYLKEAF 366

Query: 396 RIFDHMSNKT-VVSWNSLIAG--LIKNGDVE--SAREVFSEMPGRDHISWNTMLGGLTQE 450
            +   M  +   V W +L+    + KN D+   SAR++F   P   +  +  +L  +  +
Sbjct: 367 DLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDP--KNCGYYVLLSNIYAD 424

Query: 451 NMFEEAMELFRVML 464
               E +E  R+++
Sbjct: 425 AGRWEDVERMRILM 438



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 167/385 (43%), Gaps = 65/385 (16%)

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           NV SW S+I   AR     EA+  F  M +  +KPN  T  C I +C+ L +L  G +  
Sbjct: 40  NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV---------------- 306
                 G + +  + +ALVDMY KCG +  A+ LF E   RN+V                
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159

Query: 307 ---------------LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV-SAS 350
                            N+I++ Y + G++ E++ I   M+  G        LSAV  A 
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           A  G    G+  H  V++ GLE    +  ++IDMY KCGK EMA + FD M  K V SW+
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 279

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           +++AG   +G  + A EVF EM          M G                      +K 
Sbjct: 280 AMVAGYGMHGHAKEALEVFYEM---------NMAG----------------------VKP 308

Query: 471 DRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           + +T V V +AC + G L+    W  A   +  +   ++    +VD+  R G  + A  +
Sbjct: 309 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDL 368

Query: 530 FRRMEKR-DVSAWTAAIGAMAMEGN 553
            + M+ R D   W A +GA  M  N
Sbjct: 369 IKGMKLRPDFVVWGALLGACRMHKN 393


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 268/798 (33%), Positives = 439/798 (55%), Gaps = 52/798 (6%)

Query: 61   GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT-LFMYNSLIRGYSCI--- 116
            G +P  ++  +CT A++     +   Q   ++ +K  +   T LFMY+    G   I   
Sbjct: 823  GLRPDDVT--LCTLARV-----VKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWN 875

Query: 117  ---------GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
                     G   EA+  +V++    +  D  TF  +L+     +    G Q+HG +V+ 
Sbjct: 876  KTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS 935

Query: 168  GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
            G D+ V V NCLIN Y + G +   R VF +M+E ++VSW ++I  CA   L + +V +F
Sbjct: 936  GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMF 995

Query: 228  FEMVEEGIKPNSVTMVCVISACAKLQN-LELGDRVCAYIDELGMKANALMVNALVDMYMK 286
             +++  G+ P+  T+  V+ AC+ L     L  ++ A   + G+  ++ +   L+D+Y K
Sbjct: 996  VDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSK 1055

Query: 287  CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
             G ++ A+ LF      +L   N +M  Y+  G   +AL +   M   G R +++T+ +A
Sbjct: 1056 SGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANA 1115

Query: 347  VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
              A+  L  L  G+     V++ G      + + ++DMY+KCG                 
Sbjct: 1116 AKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCG----------------- 1158

Query: 407  VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                          ++ESAR +F+E+P  D ++W TM+ G  +    E A+  +  M   
Sbjct: 1159 --------------EMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLS 1204

Query: 467  RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            +++ D  T   +  AC  L AL+  + I+A   K     D  + T+LVDM+A+CG+ + A
Sbjct: 1205 KVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDA 1264

Query: 527  MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
              +F+R     +++W A I  +A  GN E+A++ F EM  +G+ PD + F+GVL+ACSH 
Sbjct: 1265 RGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHS 1324

Query: 587  GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
            GLV++ +  F SM  I+G+ P+I HY C+VD L RAG + EA  +I SMP E +  ++ +
Sbjct: 1325 GLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRT 1384

Query: 647  LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
            LL AC+   + +     AE++  L+P  S  +VLLSN+YA+A +W NVA  R  M++  +
Sbjct: 1385 LLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANV 1444

Query: 707  RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            +K PG S +++  KVH F +GD SH E + I + +  +  R+R+ GY+PD    L+DV+E
Sbjct: 1445 KKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEE 1504

Query: 767  QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
            ++K+  L +HSEKLA+A+GL+ T  +  +RV+KNLR+C DCH+  K +SKV++RE+++RD
Sbjct: 1505 EDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRD 1564

Query: 827  NNRFHFFRQGSCSCSDFW 844
             NRFH FR G CSC D+W
Sbjct: 1565 ANRFHHFRSGVCSCGDYW 1582



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 146/597 (24%), Positives = 266/597 (44%), Gaps = 69/597 (11%)

Query: 135  LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
            +P  F+   +L     +S    G + H  I+  G   D F+ N LI  Y +CG +   R+
Sbjct: 626  IPQWFS---ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARK 682

Query: 195  VFDEM--SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            +FD    + R++V+W +++ A A  D  ++  +LF  +    +     T+  V   C   
Sbjct: 683  LFDTTPDTSRDLVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLS 740

Query: 253  QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             +    + +  Y  ++G++ +  +  ALV++Y K G +  A+ LF     R++VL N +M
Sbjct: 741  ASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMM 800

Query: 313  SNYVRLGLAREALAILDEMLLHGPRPDRVTM--LSAVSASAQL----------------- 353
              YV  GL  EAL +  E    G RPD VT+  L+ V  S Q                  
Sbjct: 801  KAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLF 860

Query: 354  --------GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY-------------------- 385
                     D++       + L+ G E W+++ +  +DM                     
Sbjct: 861  MYDDDDDGSDVIAWNKTLSWFLQRG-ETWEAV-DCFVDMINSRVACDGLTFVVMLSVVAG 918

Query: 386  ---MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
               ++ GKQ     +   + ++ V   N LI   +K G V  AR VF +M   D +SWNT
Sbjct: 919  LNCLELGKQIHGIVVRSGL-DQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNT 977

Query: 443  MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL-GALDLAKWIYAYIEKN 501
            M+ G     + E ++ +F  +L   +  D+ T+  V  AC  L G   LA  I+A   K 
Sbjct: 978  MISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKA 1037

Query: 502  GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            G+  D  ++T L+D++++ G  + A  +F   +  D+++W A +    + G+  +A+ L+
Sbjct: 1038 GVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY 1097

Query: 562  NEMLRQGIKPDSIVFVGVLTACSHGGLV--NQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
              M   G + + I       A   GGLV   QG  + +++    G +  +     ++D+ 
Sbjct: 1098 ILMQESGERANQITLANAAKAA--GGLVGLKQGKQI-QAVVVKRGFNLDLFVISGVLDMY 1154

Query: 620  GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA--AYAAERITELDPEK 674
             + G +  A  +   +P  P+DV W ++++ C ++   + A   Y   R++++ P++
Sbjct: 1155 LKCGEMESARRIFNEIP-SPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDE 1210


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/757 (36%), Positives = 395/757 (52%), Gaps = 104/757 (13%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  VL  C    +F +G +VH  I       D  +   L++FY  CGD+ +GRRVFD M
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI---KPNSV---------------- 240
            ++NV  W  ++   A+    KE++ LF  MVE+GI   +P S                 
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220

Query: 241 --------------------------------TMVCVISACAKLQNLELGDRVCAYIDEL 268
                                           T++ V+  CA    L LG  V +   + 
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
             +      N L+DMY KCG +D A ++F +  +RN+V   ++++ Y R G +  A+ +L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +M   G + D V + S + A A+ G L  G+  H Y+  N +E    +CN ++DMY KC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G                                +E+A  VFS M  +D ISWNTM+G L 
Sbjct: 401 G-------------------------------SMEAANSVFSTMVVKDIISWNTMIGEL- 428

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
                               K D  TM  V  AC  L AL+  K I+ YI +NG   D  
Sbjct: 429 --------------------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRH 468

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +A ALVD++ +CG    A  +F  +  +D+ +WT  I    M G G +A+  FNEM   G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           I+PD + F+ +L ACSH GL+ QGW  F  M +   + P++ HY CMVDLL R G L +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
            + I+++P+ P+  IWG+LL  C+ + ++++A   AER+ EL+PE SG +VLL+NIYA A
Sbjct: 589 YEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEA 648

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG-DESHPEMNNISSMLREMNCR 747
            KW  V R+R ++ +QG+RK PG S IE+ GKV+ F SG + SHP   NI S+L++M  +
Sbjct: 649 EKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRK 708

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +++ G+ P     L++ DE +K+  L  HSEKLAMAFGL++      IRV KNLR+C DC
Sbjct: 709 MKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDC 768

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H  AK +SK   REI++RD NRFH F+ G CSC  FW
Sbjct: 769 HEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 217/462 (46%), Gaps = 58/462 (12%)

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           + AF+ +  D      +  +NS+I GY   GL    + +Y ++   GI  D  T   VL 
Sbjct: 202 ESAFELF--DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
            C  S     G  VH   +K  F+R +   N L++ Y +CGD+    RVF++M ERNVVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           WTS+I    R      A+ L  +M +EG+K + V +  ++ ACA+  +L+ G  V  YI 
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
              M++N  + NAL+DMY KCG+++ A  +F     ++++  NT++              
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL----------- 428

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
                     +PD  TM   + A A L  L  G+  HGY+LRNG      + N ++D+Y+
Sbjct: 429 ----------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG   +A  +FD + +K +VSW  +IAG   +G    A   F+EM  RD          
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM--RD---------- 526

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                                I+ D V+ + +  AC + G L+   W + YI KN  + +
Sbjct: 527 -------------------AGIEPDEVSFISILYACSHSGLLEQG-WRFFYIMKNDFNIE 566

Query: 507 MQLA--TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
            +L     +VD+ +R G+  +A +    +    D + W A +
Sbjct: 567 PKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 62/304 (20%)

Query: 430 SEMPGR--DH--ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           S  P R  DH    +N  +    Q    E AMEL  + + ++ +++  T   V   C  L
Sbjct: 55  SATPTRTIDHQVTDYNAKILHFCQLGDLENAMEL--ICMCKKSELETKTYSSVLQLCAGL 112

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
            +    K +++ I+ N +  D  L   LV  +A CGD +   +VF  MEK++V  W   +
Sbjct: 113 KSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMV 172

Query: 546 GAMAMEGNGEQAVELFNEMLRQGI---KPDS-------------IVFVGVLTACSHGGLV 589
              A  G+ ++++ LF  M+ +GI   +P+S             I +  +++     GL 
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLT 232

Query: 590 NQGWHLFRSM----TDIHGVSPQIVHYGC------------------------------M 615
            +G  +++ M     D+   +   V  GC                              +
Sbjct: 233 ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 292

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           +D+  + G L  AL + + M  E N V W S++A   +    D A    +++     EK 
Sbjct: 293 LDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIKLLQQM-----EKE 346

Query: 676 GVHV 679
           GV +
Sbjct: 347 GVKL 350


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 275/796 (34%), Positives = 435/796 (54%), Gaps = 49/796 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFT 140
           SL+ A++ FD   + +  S     +N+L+ GY      ++ +  +V +   G  LP+ FT
Sbjct: 86  SLSDAEELFDRMPRRDVAS-----WNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF---- 196
           F  V+ +C          Q+ G   K  F  D  VE  L++ +  CG +    R+F    
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200

Query: 197 ---------------------------DEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
                                      ++M+ER+VVSW  +I A ++    +EA+ L  E
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M  +G++ +S T    ++ACA+L +L  G ++ A +     + +  + +AL+++Y KCG+
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
              AK++F   +DRN V    ++   ++     +++ + ++M       D+  + + +S 
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                DL  GR  H   L++G      + N++I +Y KCG  + A  +F  MS + +VSW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-I 468
            S+I    + G++  ARE F  M  R+ I+WN MLG   Q    E+ ++++  MLS++ +
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             D VT V +   C  +GA  L   I  +  K G+  ++ +A A + M+++CG    A +
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F  +  +DV +W A I   +  G G+QA + F++ML +G KPD I +V VL+ CSH GL
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V +G   F  MT +HG+SP + H+ CMVDLLGRAG L EA DLI  MP++P   +WG+LL
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           +AC+ H N ++A  AA+ + ELD   SG ++LL+ IY+ AGK  + A+VR  M+++GI+K
Sbjct: 681 SACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKK 740

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG S +EV  KVH F + D SHP++  I + L E+  ++   GYV             E
Sbjct: 741 NPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYV-----------RTE 789

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
                 HHSEKLA+AFG++S    MPI ++KNLR+C DCH+  KL+S V DRE ++RD  
Sbjct: 790 SPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGV 849

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F+ GSCSC D+W
Sbjct: 850 RFHHFKSGSCSCGDYW 865



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 232/534 (43%), Gaps = 103/534 (19%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV--------- 195
           L +C    A      +HG +V +G    VF++N L++ Y  CG + D RR+         
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70

Query: 196 -----------------------FDEMSERNVVSWTSLICAC--ARRDLPKEAVYLFFEM 230
                                  FD M  R+V SW +L+     ARR L  + +  F  M
Sbjct: 71  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFL--DGLETFVSM 128

Query: 231 VEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
              G   PN+ T  CV+ +C  L   EL  ++     +     +  +  ALVDM+++CG 
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY 188

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRL------------------------------- 318
           VD A +LF + +   +   N++++ Y +L                               
Sbjct: 189 VDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS 248

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G  REAL ++ EM   G R D  T  S+++A A+L  L  G+  H  V+R+  +    + 
Sbjct: 249 GRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA 308

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           + +I++Y KCG  + A R+F+ + ++  VSW  LI                         
Sbjct: 309 SALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLI------------------------- 343

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                 GG  Q   F +++ELF  M +E + +D+  +  + S C     L L + +++  
Sbjct: 344 ------GGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 397

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K+G +  + ++ +L+ ++A+CGD Q A  VF  M +RD+ +WT+ I A +  GN  +A 
Sbjct: 398 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 457

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           E F+ M  +    ++I +  +L A    G    G  ++ +M     V+P  V Y
Sbjct: 458 EFFDGMDTR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 507



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 141/566 (24%), Positives = 249/566 (43%), Gaps = 68/566 (12%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           + C  + +  +  L     A +Y+  ++     +  +N +I   S  G   EA+ L VE+
Sbjct: 204 IFCRNSMLAGYAKLYGIDHAIEYF--EDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 261

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              G+  D  T+   L AC +  + G G Q+H  +++     D +V + LI  Y +CG  
Sbjct: 262 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 321

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            + +RVF+ + +RN VSWT LI    + +   ++V LF +M  E +  +   +  +IS C
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
               +L LG ++ +   + G     ++ N+L+ +Y KCG +  A+ +F    +R++V   
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 441

Query: 310 TIMSNYVRLG---LAREAL------------AILDEMLLHGPR----------------- 337
           ++++ Y ++G    ARE              A+L   + HG                   
Sbjct: 442 SMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 501

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD VT ++     A +G    G    G+ ++ GL    S+ N  I MY KCG+   A ++
Sbjct: 502 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD ++ K VVSWN++I G  ++G                               M ++A 
Sbjct: 562 FDLLNGKDVVSWNAMITGYSQHG-------------------------------MGKQAA 590

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDM 516
           + F  MLS+  K D ++ V V S C + G +   K  +  + + +GI   ++  + +VD+
Sbjct: 591 KTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDL 650

Query: 517 FARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
             R G    A  +  +M  K     W A + A  + GN E A EL  + + +   PDS  
Sbjct: 651 LGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA-ELAAKHVFELDSPDSGS 709

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTD 601
           ++ +    S  G  +    + + M D
Sbjct: 710 YMLLAKIYSDAGKSDDSAQVRKLMRD 735



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 182/386 (47%), Gaps = 3/386 (0%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N +  N +++ Y K G++  A++LF     R++   NT+MS Y +     + L     M 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 333 LHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
             G   P+  T    + +   LG         G   +    G   +   ++DM+++CG  
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           + A R+F  +   T+   NS++AG  K   ++ A E F +M  RD +SWN M+  L+Q  
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+ L   M  + +++D  T     +AC  L +L   K ++A + ++    D  +A+
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL++++A+CG  + A +VF  ++ R+  +WT  IG         ++VELFN+M  + +  
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D      +++ C +   +  G  L  S+    G +  IV    ++ L  + G L  A  +
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQL-HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV 428

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNV 657
             SM  E + V W S++ A  +  N+
Sbjct: 429 FSSMS-ERDIVSWTSMITAYSQIGNI 453



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 149/351 (42%), Gaps = 51/351 (14%)

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD-HMSNK 404
           A+ +    G L   R  HG ++  GL     + NT++  Y  CG    A R+    +   
Sbjct: 10  ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V++ N ++ G  K G +  A E+F  MP RD  SWNT++ G  Q   F + +E F  M 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 465 SERIKV-DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG-- 521
                + +  T   V  +CG LG  +LA  +     K     D  + TALVDMF RCG  
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 522 -----------------------------DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
                                            A++ F  M +RDV +W   I A++  G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW------HLFRSMTDIHGVS 606
              +A+ L  EM R+G++ DS  +   LTAC+   L + GW       + RS+       
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACAR--LFSLGWGKQLHAKVIRSL------- 300

Query: 607 PQIVHY--GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           PQI  Y    +++L  + G   EA  +  S+  + N V W  L+    +++
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQYE 350


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/507 (46%), Positives = 336/507 (66%)

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD  T  S + A   L DL  GR+ HG V + G      + N ++ +Y  CG+   A  +
Sbjct: 126 PDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLL 185

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F+ M  + VV+WN +IA LIK GD E A ++FS MP R+  SW +M+ G  Q    +EA+
Sbjct: 186 FEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAI 245

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF  M    +K + VT+V V +AC  LGALDL   I+ Y  ++G   +++++  L+DM+
Sbjct: 246 HLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMY 305

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            +CG  + A +VF  ME+R V +W+A IG +AM G  E+A+ LF++M + GI+P+ + F+
Sbjct: 306 VKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFI 365

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           G+L ACSH GL+++G   F SMT  +G+ PQI HYGCMVDLL RAGLL EA + I +MP+
Sbjct: 366 GLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPM 425

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           +PN V+WG+LL AC+ H+NV++A  A + + ELDP   G +V+LSNIYA AG+W + ARV
Sbjct: 426 KPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARV 485

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  MK++ ++K PG SSI V+G VHEF +G+ESHP+   I     E+   +R  GYVP+ 
Sbjct: 486 RKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNT 545

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
           + VLLD++E EK   +S HSEKLA+ FGL++T    PIR++KNLR+C DCHS  KL+S +
Sbjct: 546 SVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAI 605

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +REI+VRD NRFH F   SCSC D+W
Sbjct: 606 VNREIVVRDRNRFHCFNDNSCSCRDYW 632



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 215/465 (46%), Gaps = 43/465 (9%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           M   L+  P+    P        H  K    ++  I  L+N  +  EL+Q H  I+K   
Sbjct: 1   MLFALSSFPI----PQSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNA 56

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
                 +++V   CA   +F    YAQ+ F    K    +   F++NS ++  +     +
Sbjct: 57  PLSILPLTRVGLVCAFTPSFH---YAQQIFKCVEKQKPET---FVWNSCLKALAEGDSPI 110

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +AI L+  L  + + PD FT   VL AC        G  +HG + K+GF  +++++N ++
Sbjct: 111 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIV 170

Query: 181 NFYGECGDIVDGRRVFDEMS-------------------------------ERNVVSWTS 209
           + Y  CG++ + R +F++M                                ERNV SWTS
Sbjct: 171 HLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTS 230

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I    +    KEA++LF +M E G+K N VT+V V++ACA L  L+LG R+  Y +  G
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
            K N  + N L+DMY+KCG ++ A ++F E ++R +V  + ++      G A EAL +  
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKC 388
           +M   G  P+ VT +  + A + +G +  GR     + R+ G+         M+D+  + 
Sbjct: 351 DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRA 410

Query: 389 GKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNGDVESAREVFSEM 432
           G    A     +M  K   V W +L+     + +VE A E    +
Sbjct: 411 GLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL 455



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 425 AREVFS--EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           A+++F   E    +   WN+ L  L + +   +A+ LF  +    +  D  T   V  AC
Sbjct: 79  AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             L  L   + ++  +EK G   ++ L   +V ++A CG+   A  +F +M +RDV  W 
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198

Query: 543 AAIGAMAMEGNGE-------------------------------QAVELFNEMLRQGIKP 571
             I  +  +G+ E                               +A+ LF +M   G+K 
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           + +  V VL AC+  G ++ G  +    ++ HG    +     ++D+  + G L EA  +
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRI-HEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKV 317

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
            + M  E   V W +++     H   + A      ++++  E +GV
Sbjct: 318 FEEME-ERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGV 362



 Score = 42.4 bits (98), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 11/186 (5%)

Query: 526 AMQVFRRMEKR--DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           A Q+F+ +EK+  +   W + + A+A   +   A+ LF  + +  + PD+     VL AC
Sbjct: 79  AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
            +   ++ G  +   + +  G    +     +V L    G +GEA  L + MP + + V 
Sbjct: 139 LNLLDLSNG-RILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMP-QRDVVT 196

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI--YASAGKWTNVARVRLQM 701
           W  ++A   K  + + A     R+    PE++ V    S I  Y   GK      +  +M
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSRM----PERN-VRSWTSMIAGYVQCGKAKEAIHLFAKM 251

Query: 702 KEQGIR 707
           +E G++
Sbjct: 252 EEAGVK 257


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/795 (35%), Positives = 434/795 (54%), Gaps = 43/795 (5%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H   +K GL       + +V   A+ G  +S   A + F++ ++D    A+   +NS I 
Sbjct: 186 HGLAVKSGLDRSTLVANALVGMYAKCGLLDS---ALRVFEW-MRDGRDVAS---WNSAIS 238

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
           G    G+ +EA+ L+  +   G   + +T   VL  C + +    G ++H A++K G + 
Sbjct: 239 GCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEF 298

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           ++   N L+  Y  CG +    RVF E+ +++ +SW S++    +  L  EA+  F EMV
Sbjct: 299 NIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMV 357

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           + G  P+   +V ++SA   L  L  G  V AY  +  + ++  + N L+DMY+KC +V+
Sbjct: 358 QNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVE 417

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            + ++F   + ++ V   TI++ Y +     EA+         G + D + M S + A +
Sbjct: 418 CSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
            L  +   +  H Y +RNGL   D I  N +ID+Y +CG+   A  IF+ +  K +V+  
Sbjct: 478 GLKSISLLKQVHSYAIRNGL--LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVT-- 533

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                                        W +M+    +  +  EA+ LF  ML+  I+ 
Sbjct: 534 -----------------------------WTSMVNCFAENGLLHEAVALFGKMLNAGIQP 564

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           D V +VG+  A   L +L   K I+ ++ +     +  + ++LVDM++ CG    A++VF
Sbjct: 565 DSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVF 624

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
              + +DV  WTA I A  M G+G+QA+ +F  ML  G+ PD + F+ +L ACSH  LV+
Sbjct: 625 DEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVD 684

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G      M   + + P   HY C+VDLLGR+G   EA   IKSMP+EP  V+W +LL A
Sbjct: 685 EGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGA 744

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H+N ++A  A +++ EL+P+  G +VL+SN++A  GKW NV  +R +M EQG+RK P
Sbjct: 745 CRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDP 804

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG-YVPDLTNVLLDVDEQEK 769
             S IE+   VH FT+ D SH +   I   L E+  +LR  G YV D + VL DV E+EK
Sbjct: 805 ACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEK 864

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
             LL  HSE+LA++FGLIST+   P+R+ KNLR+C DCH F KLVSK+++REI+VRD NR
Sbjct: 865 IDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANR 924

Query: 830 FHFFRQGSCSCSDFW 844
           FH F  G+CSC DFW
Sbjct: 925 FHHFSGGTCSCGDFW 939



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 196/643 (30%), Positives = 310/643 (48%), Gaps = 67/643 (10%)

Query: 43  KTLNELKQPHCHILKQG-LGHKPS--YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           + ++E +Q H H +  G LG   +    +K++    + G    L  A + FD        
Sbjct: 69  RAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCG---RLPDAHRLFD-----GMP 120

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAG----FGILPDKFTFPFVLNACTKSSAFG 155
           + T+F +N+LI      G   EA+ +Y  +       G  PD  T   VL AC       
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNVVSWTSLICAC 214
            G +VHG  VK G DR   V N L+  Y +CG +    RVF+ M + R+V SW S I  C
Sbjct: 181 CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +  +  EA+ LF  M  +G   NS T V V+  CA+L  L  G  + A + + G + N 
Sbjct: 241 VQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN- 299

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           +  NAL+ MY +CG VD+A ++F E  D++ +  N+++S YV+  L  EA+    EM+ +
Sbjct: 300 IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G  PD   ++S +SA   LG L+ GR  H Y ++  L+    I NT++DMY+KC   E +
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECS 419

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            R+FD M  K  VSW ++IA                                  Q + + 
Sbjct: 420 ARVFDRMRIKDHVSWTTIIA-------------------------------CYAQSSRYS 448

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           EA+  FR    E IKVD + M  +  AC  L ++ L K +++Y  +NG+  D+ L   ++
Sbjct: 449 EAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRII 507

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           D++  CG+   A+ +F  ++K+D+  WT+ +   A  G   +AV LF +ML  GI+PDS+
Sbjct: 508 DIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSV 567

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHG--------VSPQIVHYGCMVDLLGRAGLLG 626
             VG+L A +    + +G        +IHG        V   +V    +VD+    G + 
Sbjct: 568 ALVGILGAIAGLSSLTKG-------KEIHGFLIRGKFPVEGAVV--SSLVDMYSGCGSMN 618

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            AL +      + + V+W +++ A   H +   A Y  +R+ E
Sbjct: 619 YALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYIFKRMLE 660



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 247/555 (44%), Gaps = 72/555 (12%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVK---MGFDRDVFVENCLINFYGECGDIVDG 192
           P    + +VL+      A  EG Q+H   V    +G D   F+   L+  YG+CG + D 
Sbjct: 53  PPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDA 112

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE----GIKPNSVTMVCVISA 248
            R+FD M  R V SW +LI AC       EAV ++  M       G  P+  T+  V+ A
Sbjct: 113 HRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKA 172

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD-RNLVL 307
           C    +   G  V     + G+  + L+ NALV MY KCG +D+A ++F   +D R++  
Sbjct: 173 CGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVAS 232

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N+ +S  V+ G+  EAL +   M   G   +  T +  +   A+L  L  GR  H  +L
Sbjct: 233 WNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALL 292

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           + G E ++  CN ++ MY +CG  + A R+F  + +K  +SWNS+++  ++N        
Sbjct: 293 KCGTE-FNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQN-------- 343

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                                   ++ EA++ F  M+      D   +V + SA G+LG 
Sbjct: 344 -----------------------RLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGR 380

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L   + ++AY  K  +  D+Q+A  L+DM+ +C   + + +VF RM  +D  +WT  I  
Sbjct: 381 LINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIAC 440

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWH-- 594
            A      +A+  F    ++GIK D ++   +L ACS           H   +  G    
Sbjct: 441 YAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDL 500

Query: 595 -LFRSMTDIHGV---------------SPQIVHYGCMVDLLGRAGLLGEALDLIKSM--- 635
            L   + DI+G                   IV +  MV+     GLL EA+ L   M   
Sbjct: 501 ILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNA 560

Query: 636 PVEPNDVIWGSLLAA 650
            ++P+ V    +L A
Sbjct: 561 GIQPDSVALVGILGA 575


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 297/880 (33%), Positives = 460/880 (52%), Gaps = 107/880 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHK---------PSYISKVVCTCAQMGTFESLTY-AQK 88
           LK CK+ N + Q H  I+  GL            P+  S+   +   +GT    +Y A  
Sbjct: 51  LKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLACG 110

Query: 89  AFDY--YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           A DY   + +  T +    +N LIR +   G    AI++   +   G  PD FT P VL 
Sbjct: 111 ATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLK 170

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER---N 203
           AC +  ++  G   HG I   GF+ +VF+ N L+  Y  CG + +   +FDE+++R   +
Sbjct: 171 ACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDD 230

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEM---VEEGIKPNS-----VTMVCVISACAKLQNL 255
           V+SW S++ A  +      A+ LF +M   V E  KP +     +++V ++ AC  L+ +
Sbjct: 231 VISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE--KPTNERSDIISIVNILPACGSLKAV 288

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKD----------- 302
                V       G   +  + NAL+D Y KCG ++ A ++F   E KD           
Sbjct: 289 PQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 348

Query: 303 ----------------------RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                                  ++V    +++ Y + G + EAL +  +M+  G  P+ 
Sbjct: 349 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 408

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS----------ICNTMIDMYMKCGK 390
           VT++S +SA A LG    G   H Y L+N L   D+          + N +IDMY KC  
Sbjct: 409 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC-- 466

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP--GRDHISWNTMLGGLT 448
                R F                        ++AR +F ++P   R+ ++W  M+GG  
Sbjct: 467 -----RSF------------------------KAARSIFDDIPLEERNVVTWTVMIGGHA 497

Query: 449 QENMFEEAMELFRVMLSERIKV--DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH-- 504
           Q     +A++LF  M+SE   V  +  T+  +  AC +L A+ + K I+AY+ ++  +  
Sbjct: 498 QYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYES 557

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
               +A  L+DM+++CGD   A  VF  M ++   +WT+ +    M G G +A+++F++M
Sbjct: 558 SAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM 617

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
            + G  PD I F+ VL ACSH G+V+QG   F SM+  +G++P+  HY C +DLL R+G 
Sbjct: 618 RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGR 677

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L +A   +K MP+EP  V+W +LL+AC+ H NV++A +A  ++ E++ E  G + L+SNI
Sbjct: 678 LDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 737

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YA+AG+W +VAR+R  MK+ GI+K PG S ++       F  GD SHP    I ++L  +
Sbjct: 738 YATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL 797

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
             R++  GYVP+    L DVDE+EK  LL  HSEKLA+A+GL++TS   PIR+ KNLR+C
Sbjct: 798 IDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVC 857

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCHS    +SK+ D EI+VRD +RFH F+ GSCSC  +W
Sbjct: 858 GDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/796 (34%), Positives = 435/796 (54%), Gaps = 49/796 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFT 140
           SL+ A++ FD   + +  S     +N+L+ GY      ++ +  +V +   G  LP+ FT
Sbjct: 86  SLSDAEELFDRMPRRDVAS-----WNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF---- 196
           F  V+ +C          Q+ G   K  F  D  VE  L++ +  CG +    R+F    
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200

Query: 197 ---------------------------DEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
                                      ++M+ER+VVSW  +I A ++    +EA+ L  E
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M  +G++ +S T    ++ACA+L +L  G ++ A +     + +  + +AL+++Y KCG+
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
              AK++F   +DRN V    ++   ++     +++ + ++M       D+  + + +S 
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                DL  GR  H   L++G      + N++I +Y KCG  + A  +F  MS + +VSW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-I 468
            S+I    + G++  ARE F  M  R+ I+WN MLG   Q    E+ ++++  MLS++ +
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             D VT V +   C  +GA  L   I  +  K G+  ++ +A A + M+++CG    A +
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F  +  +DV +W A I   +  G G+QA + F++ML +G KPD I +V VL+ CSH GL
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V +G   F  MT +HG+SP + H+ CMVDLLGRAG L EA DLI  MP++P   +WG+LL
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           +AC+ H N ++A  AA+ + ELD   SG ++LL+ IY+ AGK  + A+VR  M+++GI+K
Sbjct: 681 SACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKK 740

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG S +EV  KVH F + D SHP++  I + + E+  ++   GYV             E
Sbjct: 741 NPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTE 789

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
                 HHSEKLA+AFG++S    MPI ++KNLR+C DCH+  KL+S V DRE ++RD  
Sbjct: 790 SPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGV 849

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F+ GSCSC D+W
Sbjct: 850 RFHHFKSGSCSCGDYW 865



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 232/534 (43%), Gaps = 103/534 (19%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV--------- 195
           L +C    A      +HG +V +G    VF++N L++ Y  CG + D RR+         
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70

Query: 196 -----------------------FDEMSERNVVSWTSLICAC--ARRDLPKEAVYLFFEM 230
                                  FD M  R+V SW +L+     ARR L  + +  F  M
Sbjct: 71  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFL--DGLETFVSM 128

Query: 231 VEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
              G   PN+ T  CV+ +C  L   EL  ++     +     +  +  ALVDM+++CG 
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY 188

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRL------------------------------- 318
           VD A +LF + +   +   N++++ Y +L                               
Sbjct: 189 VDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS 248

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G  REAL ++ EM   G R D  T  S+++A A+L  L  G+  H  V+R+  +    + 
Sbjct: 249 GRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA 308

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           + +I++Y KCG  + A R+F+ + ++  VSW  LI                         
Sbjct: 309 SALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLI------------------------- 343

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                 GG  Q   F +++ELF  M +E + +D+  +  + S C     L L + +++  
Sbjct: 344 ------GGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 397

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K+G +  + ++ +L+ ++A+CGD Q A  VF  M +RD+ +WT+ I A +  GN  +A 
Sbjct: 398 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 457

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           E F+ M  +    ++I +  +L A    G    G  ++ +M     V+P  V Y
Sbjct: 458 EFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 507



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 141/566 (24%), Positives = 249/566 (43%), Gaps = 68/566 (12%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           + C  + +  +  L     A +Y+  ++     +  +N +I   S  G   EA+ L VE+
Sbjct: 204 IFCRNSMLAGYAKLYGIDHAIEYF--EDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 261

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              G+  D  T+   L AC +  + G G Q+H  +++     D +V + LI  Y +CG  
Sbjct: 262 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 321

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            + +RVF+ + +RN VSWT LI    + +   ++V LF +M  E +  +   +  +IS C
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
               +L LG ++ +   + G     ++ N+L+ +Y KCG +  A+ +F    +R++V   
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 441

Query: 310 TIMSNYVRLG---LAREAL------------AILDEMLLHGPR----------------- 337
           ++++ Y ++G    ARE              A+L   + HG                   
Sbjct: 442 SMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 501

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD VT ++     A +G    G    G+ ++ GL    S+ N  I MY KCG+   A ++
Sbjct: 502 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD ++ K VVSWN++I G  ++G                               M ++A 
Sbjct: 562 FDLLNGKDVVSWNAMITGYSQHG-------------------------------MGKQAA 590

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDM 516
           + F  MLS+  K D ++ V V S C + G +   K  +  + + +GI   ++  + +VD+
Sbjct: 591 KTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDL 650

Query: 517 FARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
             R G    A  +  +M  K     W A + A  + GN E A EL  + + +   PDS  
Sbjct: 651 LGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA-ELAAKHVFELDSPDSGS 709

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTD 601
           ++ +    S  G  +    + + M D
Sbjct: 710 YMLLAKIYSDAGKSDDSAQVRKLMRD 735



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 182/386 (47%), Gaps = 3/386 (0%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N +  N +++ Y K G++  A++LF     R++   NT+MS Y +     + L     M 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 333 LHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
             G   P+  T    + +   LG         G   +    G   +   ++DM+++CG  
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           + A R+F  +   T+   NS++AG  K   ++ A E F +M  RD +SWN M+  L+Q  
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+ L   M  + +++D  T     +AC  L +L   K ++A + ++    D  +A+
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL++++A+CG  + A +VF  ++ R+  +WT  IG         ++VELFN+M  + +  
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D      +++ C +   +  G  L  S+    G +  IV    ++ L  + G L  A  +
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQL-HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV 428

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNV 657
             SM  E + V W S++ A  +  N+
Sbjct: 429 FSSMS-ERDIVSWTSMITAYSQIGNI 453



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 150/351 (42%), Gaps = 51/351 (14%)

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD-HMSNK 404
           A+ +    G L   R  HG ++  GL     + NT++  Y+ CG    A R+    +   
Sbjct: 10  ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 69

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V++ N ++ G  K G +  A E+F  MP RD  SWNT++ G  Q   F + +E F  M 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 465 SERIKV-DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG-- 521
                + +  T   V  +CG LG  +LA  +     K     D  + TALVDMF RCG  
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189

Query: 522 -----------------------------DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
                                            A++ F  M +RDV +W   I A++  G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW------HLFRSMTDIHGVS 606
              +A+ L  EM R+G++ DS  +   LTAC+   L + GW       + RS+       
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACAR--LFSLGWGKQLHAKVIRSL------- 300

Query: 607 PQIVHY--GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           PQI  Y    +++L  + G   EA  +  S+  + N V W  L+    +++
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQYE 350


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/713 (36%), Positives = 404/713 (56%), Gaps = 32/713 (4%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G++PD  T   V+ AC        G+ VHG   K+G   +V V N L++ Y +CG + + 
Sbjct: 294 GLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEA 353

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAK 251
           R +FD    +NVVSW ++I   ++    +    L  EM  EE ++ N VT++ V+ AC+ 
Sbjct: 354 RALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSG 413

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
              L     +  Y    G   + L+ NA V  Y KC ++D A+++F   + + +   N +
Sbjct: 414 EHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNAL 473

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +  + + G   ++L +   M+  G  PDR T+ S + A A+L  L CG+  HG++LRNGL
Sbjct: 474 IGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGL 533

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           E  + I  +++ +Y++C    +   IFD M NK++V                        
Sbjct: 534 ELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVC----------------------- 570

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                   WN M+ G +Q  +  EA++ FR MLS  IK   + + GV  AC  + AL L 
Sbjct: 571 --------WNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLG 622

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K ++++  K  +  D  +  AL+DM+A+CG  +++  +F R+ ++D + W   I    + 
Sbjct: 623 KEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIH 682

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G+G +A+ELF  M  +G +PDS  F+GVL AC+H GLV +G      M +++GV P++ H
Sbjct: 683 GHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEH 742

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y C+VD+LGRAG L EAL L+  MP EP+  IW SLL++C+ + +++I    ++++ EL+
Sbjct: 743 YACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELE 802

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           P K+  +VLLSN+YA  GKW  V +VR +MKE G+ K  G S IE+ G V+ F   D S 
Sbjct: 803 PNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSL 862

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
            E   I     ++  ++   GY PD + VL +++E+ K  +L  HSEKLA++FGL++T+K
Sbjct: 863 SESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAK 922

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              +RV KNLR+C DCH+  KLVSKV  R+IIVRDN RFH F+ G C+C DFW
Sbjct: 923 GTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 267/564 (47%), Gaps = 38/564 (6%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAF 154
           D      LF+YN+L+ GYS   L  +AISL++EL +   + PD FT P V  AC   +  
Sbjct: 152 DAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADV 211

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  VH   +K G   D FV N LI  YG+CG +    +VF+ M  RN+VSW S++ AC
Sbjct: 212 ELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYAC 271

Query: 215 ARRDLPKEAVYLFFEMV---EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
           +      E   +F  ++   EEG+ P+  TMV VI ACA +  + +G  V     +LG+ 
Sbjct: 272 SENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGIT 331

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
               + N+LVDMY KCG +  A+ LF     +N+V  NTI+  Y + G  R    +L EM
Sbjct: 332 EEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEM 391

Query: 332 LLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
                 R + VT+L+ + A +    LL  +  HGY  R+G    + + N  +  Y KC  
Sbjct: 392 QREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSS 451

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            + A R+F  M  KTV SWN+LI    +NG            PG+               
Sbjct: 452 LDCAERVFCGMEGKTVSSWNALIGAHAQNG-----------FPGK--------------- 485

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
                +++LF VM+   +  DR T+  +  AC  L  L   K I+ ++ +NG+  D  + 
Sbjct: 486 -----SLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIG 540

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            +L+ ++ +C        +F +ME + +  W   I   +      +A++ F +ML  GIK
Sbjct: 541 ISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIK 600

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           P  I   GVL ACS    +  G  +       H +S        ++D+  + G + ++ +
Sbjct: 601 PQEIAVTGVLGACSQVSALRLGKEVHSFALKAH-LSEDAFVTCALIDMYAKCGCMEQSQN 659

Query: 631 LIKSMPVEPNDVIWGSLLAACQKH 654
           +   +  E ++ +W  ++A    H
Sbjct: 660 IFDRVN-EKDEAVWNVIIAGYGIH 682



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 236/500 (47%), Gaps = 50/500 (10%)

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           K     +L AC        G +VH  +        DV +   +I  Y  CG   D R VF
Sbjct: 92  KEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVF 151

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNL 255
           D   E+++  + +L+   +R  L ++A+ LF E++    + P++ T+ CV  ACA + ++
Sbjct: 152 DAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADV 211

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           ELG+ V A   + G  ++A + NAL+ MY KCG V++A ++F   ++RNLV  N++M   
Sbjct: 212 ELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYAC 271

Query: 316 VRLGLAREALAILDEMLL---HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
              G   E   +   +L+    G  PD  TM++ + A A +G++  G + HG   + G+ 
Sbjct: 272 SENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGIT 331

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
              ++ N+++DMY KCG    A  +FD    K VVSWN++I G  K GD     E+  EM
Sbjct: 332 EEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEM 391

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                                            E+++V+ VT++ V  AC     L   K
Sbjct: 392 ------------------------------QREEKVRVNEVTVLNVLPACSGEHQLLSLK 421

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I+ Y  ++G   D  +A A V  +A+C     A +VF  ME + VS+W A IGA A  G
Sbjct: 422 EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNG 481

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWHLFRSMTD 601
              ++++LF  M+  G+ PD      +L AC+           HG ++  G  L     +
Sbjct: 482 FPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLEL----DE 537

Query: 602 IHGVSPQIVHYGCMVDLLGR 621
             G+S   ++  C   LLG+
Sbjct: 538 FIGISLMSLYIQCSSMLLGK 557



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 179/337 (53%), Gaps = 10/337 (2%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T+  +N+LI  ++  G   +++ L++ +   G+ PD+FT   +L AC +      G ++H
Sbjct: 466 TVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIH 525

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G +++ G + D F+   L++ Y +C  ++ G+ +FD+M  +++V W  +I   ++ +LP 
Sbjct: 526 GFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPC 585

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+  F +M+  GIKP  + +  V+ AC+++  L LG  V ++  +  +  +A +  AL+
Sbjct: 586 EALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALI 645

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY KCG ++ ++ +F    +++  + N I++ Y   G   +A+ + + M   G RPD  
Sbjct: 646 DMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSF 705

Query: 342 TMLSAVSASAQLGDL-----LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           T L  + A    G +       G+M + Y ++  LE +  +    +DM  + G+   A +
Sbjct: 706 TFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACV----VDMLGRAGQLTEALK 761

Query: 397 IFDHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
           + + M ++     W+SL++     GD+E   EV  ++
Sbjct: 762 LVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKL 798



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 1/211 (0%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D   + +L  +N +I G+S   L  EA+  + ++   GI P +     VL AC++ SA
Sbjct: 559 IFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSA 618

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G +VH   +K     D FV   LI+ Y +CG +   + +FD ++E++   W  +I  
Sbjct: 619 LRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAG 678

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKA 272
                   +A+ LF  M  +G +P+S T + V+ AC     +  G +    +  L G+K 
Sbjct: 679 YGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKP 738

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
                  +VDM  + G +  A +L  E  D 
Sbjct: 739 KLEHYACVVDMLGRAGQLTEALKLVNEMPDE 769


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/585 (40%), Positives = 360/585 (61%), Gaps = 4/585 (0%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ A +   G+  + ++   L   Y   G +D +  LFG  ++ ++     I+  +   G
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           L  +AL    +ML  G  P+  T     S+  +L  +  G+  H   ++ G +    +  
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTF----SSILKLCPIEPGKALHSQAVKLGFDSDLYVRT 163

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++D+Y + G    A ++FD M  K++VS  +++    K+G++++AR +F  M  RD + 
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           WN M+ G TQ  M  EA+ LFR ML  + K + VT++ V SACG LGAL+  +W+++YIE
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
            NGI  ++ + TALVDM+++CG  + A  VF +++ +DV AW + I   AM G  ++A++
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF  M R G+ P +I F+G+L+AC H G V +GW +F  M D +G+ P+I HYGCMV+LL
Sbjct: 344 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 403

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG + +A +L+K+M +EP+ V+WG+LL AC+ H  + +     E + + +   SG ++
Sbjct: 404 GRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYI 463

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSNIYA+ G W  VAR+R  MK+ G++K PG SSIEVN KVHEF +G  +HP+   I  
Sbjct: 464 LLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYM 523

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           ML E+N  L+  GY P    VL D+ E EK+  L  HSEKLA+AFGLI+T     I++VK
Sbjct: 524 MLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVK 583

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH   KL+SK+  R+I+VRD NRFH F  GSCSC D+W
Sbjct: 584 NLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 210/439 (47%), Gaps = 74/439 (16%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +   KT++ L Q H  + + GL H P    K+  + A +G    L Y+   F        
Sbjct: 37  IDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLG---RLDYSVALFG-----RT 88

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            + ++F + ++I G++  GL  +A++ Y ++   G+ P+ FTF  +L  C        G 
Sbjct: 89  QNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGK 144

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-- 216
            +H   VK+GFD D++V   L++ Y   GD+V  +++FD M E+++VS T+++   A+  
Sbjct: 145 ALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHG 204

Query: 217 --------------RD---------------LPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                         RD               +P EA+ LF  M++   KPN VT++ V+S
Sbjct: 205 ELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLS 264

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC +L  LE G  V +YI+  G++ N  +  ALVDMY KCG+++ A+ +F +  D+++V 
Sbjct: 265 ACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVA 324

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N+++  Y   G ++EAL +   M   G  P  +T +  +SA        CG    G+V 
Sbjct: 325 WNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSA--------CGH--SGWV- 373

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
               EGWD I N M D Y    K E                +  ++  L + G VE A E
Sbjct: 374 ---TEGWD-IFNKMKDEYGIEPKIE---------------HYGCMVNLLGRAGHVEQAYE 414

Query: 428 VFSEMPGR-DHISWNTMLG 445
           +   M    D + W T+LG
Sbjct: 415 LVKNMNIEPDPVLWGTLLG 433


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 297/880 (33%), Positives = 460/880 (52%), Gaps = 107/880 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHK---------PSYISKVVCTCAQMGTFESLTY-AQK 88
           LK CK+ N + Q H  I+  GL            P+  S+   +   +GT    +Y A  
Sbjct: 44  LKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLACG 103

Query: 89  AFDY--YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           A DY   + +  T +    +N LIR +   G    AI++   +   G  PD FT P VL 
Sbjct: 104 ATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLK 163

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER---N 203
           AC +  ++  G   HG I   GF+ +VF+ N L+  Y  CG + +   +FDE+++R   +
Sbjct: 164 ACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDD 223

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEM---VEEGIKPNS-----VTMVCVISACAKLQNL 255
           V+SW S++ A  +      A+ LF +M   V E  KP +     +++V ++ AC  L+ +
Sbjct: 224 VISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE--KPTNERSDIISIVNILPACGSLKAV 281

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKD----------- 302
                V       G   +  + NAL+D Y KCG ++ A ++F   E KD           
Sbjct: 282 PQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 341

Query: 303 ----------------------RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                                  ++V    +++ Y + G + EAL +  +M+  G  P+ 
Sbjct: 342 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 401

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS----------ICNTMIDMYMKCGK 390
           VT++S +SA A LG    G   H Y L+N L   D+          + N +IDMY KC  
Sbjct: 402 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC-- 459

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP--GRDHISWNTMLGGLT 448
                R F                        ++AR +F ++P   R+ ++W  M+GG  
Sbjct: 460 -----RSF------------------------KAARSIFDDIPLEERNVVTWTVMIGGHA 490

Query: 449 QENMFEEAMELFRVMLSERIKV--DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH-- 504
           Q     +A++LF  M+SE   V  +  T+  +  AC +L A+ + K I+AY+ ++  +  
Sbjct: 491 QYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYES 550

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
               +A  L+DM+++CGD   A  VF  M ++   +WT+ +    M G G +A+++F++M
Sbjct: 551 SAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM 610

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
            + G  PD I F+ VL ACSH G+V+QG   F SM+  +G++P+  HY C +DLL R+G 
Sbjct: 611 RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGR 670

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L +A   +K MP+EP  V+W +LL+AC+ H NV++A +A  ++ E++ E  G + L+SNI
Sbjct: 671 LDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 730

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YA+AG+W +VAR+R  MK+ GI+K PG S ++       F  GD SHP    I ++L  +
Sbjct: 731 YATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL 790

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
             R++  GYVP+    L DVDE+EK  LL  HSEKLA+A+GL++TS   PIR+ KNLR+C
Sbjct: 791 IDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVC 850

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCHS    +SK+ D EI+VRD +RFH F+ GSCSC  +W
Sbjct: 851 GDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/791 (34%), Positives = 437/791 (55%), Gaps = 40/791 (5%)

Query: 58  QGLGHKPSYISKVVCTCAQMGTF---ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
            GL  K  Y+S V    + +G +     L  A++ FD   +  +  +    +NS+I  YS
Sbjct: 203 HGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVS----WNSMISAYS 258

Query: 115 CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF 174
             G  +EA+ L+ E+    + P+ +TF   L AC  SS   +G+ +H  ++K  +  +VF
Sbjct: 259 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 318

Query: 175 VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           V N LI  Y   G + +   +F  M + + +SW S++    +  L  EA+  + EM + G
Sbjct: 319 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 378

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
            KP+ V ++ +I+A A+  N   G ++ AY  + G+ ++  + N+LVDMY K  ++    
Sbjct: 379 QKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 438

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            +F +  D+++V   TI++ + + G    AL +  E+ L G   D + + S + A + L 
Sbjct: 439 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 498

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            +   +  H Y++R GL     + N ++D+Y +CG  + A R+F+               
Sbjct: 499 LISSVKEIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARMFE--------------- 542

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
            LI+  DV               +SW +M+       +  EA+ELF +M    ++ D ++
Sbjct: 543 -LIEFKDV---------------VSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 586

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +V + SA   L AL   K I+ ++ + G   +  LA+ LVDM+ARCG  +++  VF  + 
Sbjct: 587 LVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 646

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
            +D+  WT+ I A  M G G  A++LF  M  + I PD I FV VL ACSH GL+N+G  
Sbjct: 647 NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 706

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
              SM   + + P   HY C+VDLLGRA  L EA   +K M VEP   +W +LL ACQ H
Sbjct: 707 FLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIH 766

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
            N ++   AA+++ E+DPE  G +VL+SN+Y++  +W +V  VR++MK  G++K PG S 
Sbjct: 767 SNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSW 826

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL-RDAGYVPDLTNVLLDVDEQEKKYLL 773
           IEV  KVH F + D+SHP+   I S L ++  +L ++ GYV     VL +  E+EK  +L
Sbjct: 827 IEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQML 886

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
             HSE+LA+A+G+++T +   +R+ KNLR+C DCH+F KL+SK ++RE+++RD NRFH F
Sbjct: 887 YGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHF 946

Query: 834 RQGSCSCSDFW 844
           + G CSC D W
Sbjct: 947 KGGVCSCGDVW 957



 Score =  269 bits (688), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 191/645 (29%), Positives = 314/645 (48%), Gaps = 77/645 (11%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           K L+E +Q H H++         ++S ++V    + G    L  A+K FD          
Sbjct: 92  KALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGC---LVDAEKLFD-----GMPHK 143

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T+F +N++I  Y   G  + ++ LY E+   GI  D  TFP +L AC        G +VH
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVH 203

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICACARRDLP 220
           G  +K G+   VFV N ++  Y +C D+   R++FD M E+ +VVSW S+I A +     
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 263

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
            EA+ LF EM +  + PN+ T V  + AC     ++ G  + A + +     N  + NAL
Sbjct: 264 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 323

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           + MY + G +  A  +F    D + +  N+++S +V+ GL  EAL    EM   G +PD 
Sbjct: 324 IAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDL 383

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK-CGKQEMACRIFD 399
           V ++S ++ASA+ G+ L G   H Y ++NGL+    + N+++DMY K C  + M C IFD
Sbjct: 384 VAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC-IFD 442

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M +K VVSW ++IAG  +NG                                   A+EL
Sbjct: 443 KMPDKDVVSWTTIIAGHAQNGS-------------------------------HSRALEL 471

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           FR +  E I +D + +  +  AC  L  +   K I++YI + G+  D+ L   +VD++  
Sbjct: 472 FREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGE 530

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG+   A ++F  +E +DV +WT+ I      G   +A+ELF+ M   G++PDSI  V +
Sbjct: 531 CGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 590

Query: 580 LTACS-----------HGGLVNQGW----HLFRSMTDIHG---------------VSPQI 609
           L+A +           HG L+ +G+     L  ++ D++                 +  +
Sbjct: 591 LSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL 650

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAAC 651
           V +  M++  G  G    A+DL + M    + P+ + + ++L AC
Sbjct: 651 VLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYAC 695



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 249/534 (46%), Gaps = 53/534 (9%)

Query: 136 PDKFT----FPFVLNACTKSSAFGEGVQVHG-AIVKMGFDRDVFVENCLINFYGECGDIV 190
           P +F+    +  VL  C    A  EG QVH   I        VF+   L+  YG+CG +V
Sbjct: 72  PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           D  ++FD M  + + +W ++I A      P  ++ L+ EM   GI  ++ T  C++ AC 
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR-NLVLCN 309
            L++   G  V     + G  +   + N++V MY KC  ++ A+QLF    ++ ++V  N
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 251

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           +++S Y   G + EAL +  EM      P+  T ++A+ A      +  G   H  VL++
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
                  + N +I MY + GK   A  IF +M +   +SWNS+++G ++NG         
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNG--------- 362

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                 ++ EA++ +  M     K D V ++ + +A    G   
Sbjct: 363 ----------------------LYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTL 400

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
               I+AY  KNG+  D+Q+  +LVDM+A+    +    +F +M  +DV +WT  I   A
Sbjct: 401 HGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHA 460

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH------ 603
             G+  +A+ELF E+  +GI  D ++   +L ACS       G  L  S+ +IH      
Sbjct: 461 QNGSHSRALELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRK 513

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           G+S  ++  G +VD+ G  G +  A  + +   +E  DV+  + + +C  H  +
Sbjct: 514 GLSDLVLQNG-IVDVYGECGNVDYAARMFE--LIEFKDVVSWTSMISCYVHNGL 564


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/766 (34%), Positives = 414/766 (54%), Gaps = 38/766 (4%)

Query: 80  FESLTYAQKAF-DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
           F S   A++ F D    D  T      +N+LI G++  G G  A+ ++ E+   G+ PD 
Sbjct: 192 FGSFKLAERVFCDMLFCDRVT------FNTLISGHAQCGHGECALQIFDEMQLSGLRPDC 245

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
            T   +L AC       +G Q+H  ++K G   D   E  L++ Y +CGDI     +F+ 
Sbjct: 246 VTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNL 305

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
               NVV W  ++ A  +     ++  +F +M   GI PN  T  C++  C     +ELG
Sbjct: 306 GDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELG 365

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
           +++ +   + G +++  +   L+DMY K G +D A+++    + R++V   ++++ YV+ 
Sbjct: 366 EQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQH 425

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
               EALA   EM   G  PD + + SA SA A +  +  G   H  V  +G     SI 
Sbjct: 426 DFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIW 485

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           NT++++Y +CG+                                E A  +F E+  +D I
Sbjct: 486 NTLVNLYARCGRS-------------------------------EEAFSLFREIEHKDEI 514

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +WN ++ G  Q  ++++A+ +F  M     K +  T +   SA   L  +   K ++   
Sbjct: 515 TWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRA 574

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K G   + ++A AL+ ++ +CG  + A  +F  M  R+  +W   I + +  G G +A+
Sbjct: 575 VKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEAL 634

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           +LF++M ++G+KP+ + F+GVL ACSH GLV +G   F+SM++++G++P   HY C+VD+
Sbjct: 635 DLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDI 694

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAG L  A   +  MP+  N +IW +LL+AC+ H+N++I   AA+ + EL+P  S  +
Sbjct: 695 LGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASY 754

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLLSN YA  GKW N  +VR  MK++GIRK PG S IEV   VH F  GD  HP  + I 
Sbjct: 755 VLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIY 814

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
             L E+N RL   GY  +  N+  + ++++K      HSEKLA+AFGL++    +P+RV+
Sbjct: 815 KFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVI 874

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCHS+ K  S+V  REI++RD  RFH F  GSCSC D+W
Sbjct: 875 KNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 237/494 (47%), Gaps = 35/494 (7%)

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           +++H   V  G   D  + N LI+ Y + G +   R+VF E+S R+ VSW +++   A+ 
Sbjct: 63  LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            L KEA  L+ +M    + P    +  V+SAC K +    G  + A + +    +   + 
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           NAL+ +Y+  G+   A+++F +    + V  NT++S + + G    AL I DEM L G R
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN-TMIDMYMKCGKQEMACR 396
           PD VT+ S ++A A +GDL  G+  H Y+L+ G+  +D I   +++D+Y+KCG  E A  
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMS-FDYITEGSLLDLYVKCGDIETAHD 301

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           IF+      VV WN ++    +  D+  + E+F +M                        
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG-------------------- 341

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
                      I  ++ T   +   C   G ++L + I++   KNG   DM ++  L+DM
Sbjct: 342 -----------IHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM 390

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +++ G   +A ++   +EKRDV +WT+ I         E+A+  F EM   G+ PD+I  
Sbjct: 391 YSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
               +AC+    + QG  +  +   + G +  I  +  +V+L  R G   EA  L + + 
Sbjct: 451 ASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE 509

Query: 637 VEPNDVIWGSLLAA 650
              +++ W  L++ 
Sbjct: 510 -HKDEITWNGLISG 522


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/772 (34%), Positives = 424/772 (54%), Gaps = 37/772 (4%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           A  G F  +  A++ FD   +D    +   M ++ ++   C     +A+ L+ E+   G+
Sbjct: 143 AMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRC----SDAVELFGEMVWSGV 198

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
            P++F F  V+NACT S     G +VH  +V+ G+D+DVF  N L++ Y + GDI     
Sbjct: 199 RPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAAL 258

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF ++ + +VVSW + I  C      + A+ L  +M   G+ PN  T+  ++ ACA    
Sbjct: 259 VFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGA 318

Query: 255 LELGD--RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
                  ++  ++ +    ++  +  ALVDMY K G +D A+++F     ++L+L N ++
Sbjct: 319 GAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALI 378

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           S     G   E+L++   M   G   +R T+ + + ++A L  +      H    + G  
Sbjct: 379 SGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFL 438

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + N +ID Y KC     A ++F+  S+  ++++ S                     
Sbjct: 439 SDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTS--------------------- 477

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                     M+  L+Q +  E+A++LF  ML + ++ D   +  + +AC  L A +  K
Sbjct: 478 ----------MITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 527

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++A++ K     D+    ALV  +A+CG  + A   F  +  + V +W+A IG +A  G
Sbjct: 528 QVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHG 587

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           +G++A+++F  M+ + I P+ I    VL AC+H GLV++    F SM ++ G+     HY
Sbjct: 588 HGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHY 647

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CM+DLLGRAG L +A++L+ SMP E N  +WG+LLAA + H++ ++   AAE++  L+P
Sbjct: 648 SCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEP 707

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           EKSG HVLL+N YASAG W  VA+VR  MK+  ++K P  S +E+  +VH F  GD+SHP
Sbjct: 708 EKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHP 767

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
              +I + L E+   +  AGYVP+L   L DVD+ EK+ LLSHHSE+LA+AF LIST   
Sbjct: 768 RARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAG 827

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PIRV KNLR+C DCH   K +SK+  REII+RD NRFH F  G+CSC D+W
Sbjct: 828 APIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 191/665 (28%), Positives = 301/665 (45%), Gaps = 82/665 (12%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHK-PSYISKVVCTCAQMGTFESLTYAQKAFD 91
           SP +      ++L      H H+LK GL H   +++      C   G+      A++ FD
Sbjct: 8   SPLLTRYAATQSLFLGAHIHAHLLKSGLLHAFRNHLLSFYSKCRLPGS------ARRVFD 61

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
                   S     ++SL+  YS   L  EA++ +  +   G+  ++F  P VL     +
Sbjct: 62  ETPDPCHVS-----WSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDA 116

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSL 210
              G GVQVH   V  G   D+FV N L+  YG  G + + RRVFDE + +RN VSW  +
Sbjct: 117 ---GLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGM 173

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           + A  + D   +AV LF EMV  G++PN     CV++AC   ++LE G +V A +   G 
Sbjct: 174 MSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGY 233

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             +    NALVDMY K G +  A  +FG+    ++V  N  +S  V  G  + AL +L +
Sbjct: 234 DKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQ 293

Query: 331 MLLHGPRPDRVTMLSAVS--ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
           M   G  P+  T+ S +   A A  G    GR  HG++++   +  D I   ++DMY K 
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKY 353

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G  + A ++F+ +  K ++ WN+LI+G    G                            
Sbjct: 354 GLLDDARKVFEWIPRKDLLLWNALISGCSHGG---------------------------- 385

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
                 E++ LF  M  E   ++R T+  V  +   L A+     ++A  EK G   D  
Sbjct: 386 ---CHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSH 442

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +   L+D + +C   + A +VF      ++ A+T+ I A++   +GE A++LF EMLR+G
Sbjct: 443 VVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 502

Query: 569 IKPDSIVFVGVLTACSHGGLVNQG----WHLFRS--MTDI-------------------- 602
           ++PD  V   +L AC+      QG     HL +   MTD+                    
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD 562

Query: 603 ---HGVSPQ-IVHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQ 655
               G+  + +V +  M+  L + G    ALD+ + M    + PN +   S+L AC    
Sbjct: 563 LAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622

Query: 656 NVDIA 660
            VD A
Sbjct: 623 LVDEA 627


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/720 (35%), Positives = 403/720 (55%), Gaps = 62/720 (8%)

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-SERNVVSWTSLICA 213
            +  Q+H  I++        + + +++ Y     + D   +F+ + S    ++W S+I  
Sbjct: 22  SQAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRC 80

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
                L   ++  F +M+  G  P+      V+ +C  +++L  G+ V   I  LGM  +
Sbjct: 81  YTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFD 140

Query: 274 ALMVNALVDMYMKCGA---VDTAKQLFGECK--------------------------DRN 304
               NAL++MY K  +   V+T K++F E K                           R+
Sbjct: 141 LYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRD 200

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +V  NT++S   + G+  +AL ++ EM     RPD  T+ S +   A+  +LL G+  HG
Sbjct: 201 IVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHG 260

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           Y +RNG +    I +++IDMY KC + + +CR                            
Sbjct: 261 YAIRNGYDADVFIGSSLIDMYAKCTRVDDSCR---------------------------- 292

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
              VF  +P  D ISWN+++ G  Q  MF+E ++ F+ ML  +IK + V+   +  AC +
Sbjct: 293 ---VFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH 349

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           L  L L K ++ YI ++    ++ +A+ALVDM+A+CG+ + A  +F +ME  D+ +WTA 
Sbjct: 350 LTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAM 409

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I   A+ G+   A+ LF  M  +G+KP+ + F+ VLTACSH GLV++ W  F SMT  + 
Sbjct: 410 IMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYR 469

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + P + HY  + DLLGR G L EA + I  M +EP   +W +LLAAC+ H+N+++A   +
Sbjct: 470 IIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVS 529

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           +++  +DP+  G +VLLSNIY++AG+W +  ++R+ M+++G++K P  S IE+  KVH F
Sbjct: 530 KKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAF 589

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            +GD+SHP  + I+  L+ +  ++   GYV D T VL DV+E++K+YLL  HSE+LA+ F
Sbjct: 590 VAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITF 649

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           G+IST     IRV KNLR+C DCH+  K +SK+  REI+VRDN+RFH F+ G CSC DFW
Sbjct: 650 GIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/587 (25%), Positives = 263/587 (44%), Gaps = 82/587 (13%)

Query: 21  TNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           T Q+  KT  ++  S+      K+ ++ KQ H  IL+  L   PS +S ++   + +   
Sbjct: 3   TTQNLCKTLLQNPSSV------KSKSQAKQLHAQILRTSLP-SPSLLSTILSIYSNLNLL 55

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
                   +         +  T   + S+IR Y+  GL + ++S ++++   G  PD   
Sbjct: 56  HDSLLIFNSL-------PSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNV 108

Query: 141 FPFVLNACT--KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY--------------- 183
           FP VL +CT  K   FGE V  HG I+++G   D++  N L+N Y               
Sbjct: 109 FPSVLKSCTLMKDLRFGESV--HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKV 166

Query: 184 ---GECGDIVDG-----------RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
              G+  D+              R+VF+ M +R++VSW ++I   A+  + ++A+ +  E
Sbjct: 167 FDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVRE 226

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M    ++P+S T+  V+   A+  NL  G  +  Y    G  A+  + ++L+DMY KC  
Sbjct: 227 MGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTR 286

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           VD + ++F      + +  N+I++  V+ G+  E L    +ML+   +P+ V+  S + A
Sbjct: 287 VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 346

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            A L  L  G+  HGY++R+  +G   I + ++DMY KCG    A  IFD M    +VSW
Sbjct: 347 CAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSW 406

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            ++I G   +G                                  +A+ LF+ M  E +K
Sbjct: 407 TAMIMGYALHGHA-------------------------------YDAISLFKRMEVEGVK 435

Query: 470 VDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
            + V  + V +AC + G +D A K+  +  +   I   ++   A+ D+  R G  + A +
Sbjct: 436 PNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYE 495

Query: 529 VFRRMEKRDV-SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
               M      S W+  + A  +  N E A ++  ++    + P +I
Sbjct: 496 FISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFT--VDPQNI 540


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/766 (34%), Positives = 413/766 (53%), Gaps = 38/766 (4%)

Query: 80  FESLTYAQKAF-DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
           F S   A++ F D    D  T      +N+LI G++  G G  A+ ++ E+   G+ PD 
Sbjct: 192 FGSFKLAERVFCDMLFCDRVT------FNTLISGHAQCGHGECALQIFDEMQLSGLRPDC 245

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
            T   +L AC       +G Q+H  ++K G   D   E  L++ Y +CGDI     +F+ 
Sbjct: 246 VTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNL 305

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
               NVV W  ++ A  +     ++  +F +M   GI PN  T  C++  C     +ELG
Sbjct: 306 GDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELG 365

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
           +++ +   + G +++  +   L+DMY K   +D A+++    + R++V   ++++ YV+ 
Sbjct: 366 EQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQH 425

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
               EALA   EM   G  PD + + SA SA A +  +  G   H  V  +G     SI 
Sbjct: 426 DFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIW 485

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           NT++++Y +CG+                                E A  +F E+  +D I
Sbjct: 486 NTLVNLYARCGRS-------------------------------EEAFSLFREIDHKDEI 514

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +WN ++ G  Q  ++E+A+ +F  M     K +  T +   SA   L  +   K ++   
Sbjct: 515 TWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRA 574

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K G   + ++A AL+ ++ +CG  + A  +F  M  R+  +W   I + +  G G +A+
Sbjct: 575 VKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEAL 634

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           +LF++M ++G+KP+ + F+GVL ACSH GLV +G   F+SM++++G++P   HY C+VD+
Sbjct: 635 DLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDI 694

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAG L  A   +  MP+  N +IW +LL+AC+ H+N++I   AA+ + EL+P  S  +
Sbjct: 695 LGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASY 754

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLLSN YA  GKW N  +VR  MK++GIRK PG S IEV   VH F  GD  HP  + I 
Sbjct: 755 VLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIY 814

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
             L E+N RL   GY  +  N+  + ++++K      HSEKLA+AFGL++    +P+RV+
Sbjct: 815 KFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVI 874

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCHS+ K  S+V  REI++RD  RFH F  GSCSC D+W
Sbjct: 875 KNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 237/494 (47%), Gaps = 35/494 (7%)

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           +++H   V  G   D  + N LI+ Y + G +   R+VF E+S R+ VSW +++   A+R
Sbjct: 63  LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            L KEA  L+ +M    + P    +  V+SAC K +    G  + A + +    +   + 
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           NAL+ +Y+  G+   A+++F +    + V  NT++S + + G    AL I DEM L G R
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN-TMIDMYMKCGKQEMACR 396
           PD VT+ S ++A A +GDL  G+  H Y+L+ G+  +D I   +++D+Y+KCG  E A  
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMS-FDYITEGSLLDLYVKCGDIETAHD 301

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           IF+      VV WN ++    +  D+  + E+F +M                        
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG-------------------- 341

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
                      I  ++ T   +   C   G ++L + I++   KNG   DM ++  L+DM
Sbjct: 342 -----------IHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM 390

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +++     +A ++   +EKRDV +WT+ I         E+A+  F EM   G+ PD+I  
Sbjct: 391 YSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
               +AC+    + QG  +  +   + G +  I  +  +V+L  R G   EA  L + + 
Sbjct: 451 ASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID 509

Query: 637 VEPNDVIWGSLLAA 650
              +++ W  L++ 
Sbjct: 510 -HKDEITWNGLISG 522


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/730 (36%), Positives = 401/730 (54%), Gaps = 59/730 (8%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD---- 188
           G+L  K  F +V           EG ++   +     +  VF+ N L+N Y + G+    
Sbjct: 136 GVLGSKLVFMYV-----TCGDLREGRRIFDKVA----NEKVFLWNLLMNGYAKIGNFRES 186

Query: 189 --------------IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
                         +   R++FDE+ +R+V+SW S+I       L ++ + LF +M+  G
Sbjct: 187 LSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 246

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           I  +  TMV V++ C+    L LG  +  Y  +        + N L+DMY K G +++A 
Sbjct: 247 INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAI 306

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           Q+F    +R++V   ++++ Y R GL+  ++ +  EM   G  PD  T+ + + A A  G
Sbjct: 307 QVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTG 366

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            L  G+  H Y+  N ++    + N ++DMY KCG                         
Sbjct: 367 LLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSM----------------------- 403

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                GD  S   VFSEM  +D +SWNTM+GG ++ ++  EA+ LF V +    K + +T
Sbjct: 404 -----GDAHS---VFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLF-VEMQYNSKPNSIT 454

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           M  +  AC  L AL+  + I+ +I +NG   D  +A ALVDM+ +CG    A  +F  + 
Sbjct: 455 MACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 514

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           ++D+ +WT  I    M G G +A+  FNEM   GI+PD + F+ +L ACSH GL+++GW 
Sbjct: 515 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 574

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F  M +   + P+  HY C+VDLL RAG L +A   IK MP+EP+  IWG+LL  C+ +
Sbjct: 575 FFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIY 634

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
            +V +A   AE + EL+PE +G +VLL+NIYA A KW  V ++R ++  +G+RK PG S 
Sbjct: 635 HDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSW 694

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           IE+ GKVH F +GD SHP  N I  +L++   R+++ G+ P +   L+  D+ EK+  L 
Sbjct: 695 IEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALC 754

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
            HSEK+AMAFG++S      +RV KNLR+C DCH  AK +SK+  R+II+RD+NRFH F+
Sbjct: 755 GHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFK 814

Query: 835 QGSCSCSDFW 844
            GSCSC   W
Sbjct: 815 DGSCSCRGHW 824



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 243/484 (50%), Gaps = 46/484 (9%)

Query: 75  AQMGTF-ESLTYAQKAFDYYIKDNETSATLF---------MYNSLIRGYSCIGLGVEAIS 124
           A++G F ESL+  ++  +  I+  E++  LF          +NS+I GY   GL  + + 
Sbjct: 178 AKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLD 237

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L+ ++   GI  D  T   V+  C+ +     G  +HG  +K  F +++ + NCL++ Y 
Sbjct: 238 LFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYS 297

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           + G++    +VF+ M ER+VVSWTS+I   AR  L   +V LF EM +EGI P+  T+  
Sbjct: 298 KSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITT 357

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++ ACA    LE G  V  YI E  M+++  + NAL+DMY KCG++  A  +F E + ++
Sbjct: 358 ILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKD 417

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +V  NT++  Y +  L  EAL +  EM  +  +P+ +TM   + A A L  L  G+  HG
Sbjct: 418 IVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHG 476

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           ++LRNG      + N ++DMY+KCG   +A  +FD +  K +VSW  +IAG   +G    
Sbjct: 477 HILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG---- 532

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                                         EA+  F  M +  I+ D V+ + +  AC +
Sbjct: 533 ---------------------------YGSEAIAAFNEMRNSGIEPDEVSFISILYACSH 565

Query: 485 LGALDLAKWIYAYIEKNG--IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
            G LD   W +  + +N   I    +    +VD+ AR G+  +A +  + M  + D + W
Sbjct: 566 SGLLD-EGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 624

Query: 542 TAAI 545
            A +
Sbjct: 625 GALL 628



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 191/394 (48%), Gaps = 27/394 (6%)

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR- 340
           ++Y  C  + T+  L  E  D  +   N  +  +  LG  R A+ ++++     P+PD  
Sbjct: 46  NLYHSCATIGTS-VLPSETIDCKITDYNIEICRFCELGNLRRAMELINQ----SPKPDLE 100

Query: 341 -VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T  S +   A L  +  GR  H  +  N +E    + + ++ MY+ CG      RIFD
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160

Query: 400 HMSNKTVVSWNSLIAGLIKNGD------------------VESAREVFSEMPGRDHISWN 441
            ++N+ V  WN L+ G  K G+                  VESAR++F E+  RD ISWN
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWN 220

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           +M+ G     + E+ ++LF  ML   I  D  TMV V + C   G L L + ++ Y  K 
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA 280

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
               ++ L   L+DM+++ G+   A+QVF  M +R V +WT+ I   A EG  + +V LF
Sbjct: 281 SFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLF 340

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           +EM ++GI PD      +L AC+  GL+  G  +   + + + +   +     ++D+  +
Sbjct: 341 HEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKE-NKMQSDLFVSNALMDMYAK 399

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
            G +G+A  +   M V+ + V W +++    K+ 
Sbjct: 400 CGSMGDAHSVFSEMQVK-DIVSWNTMIGGYSKNS 432


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/694 (36%), Positives = 397/694 (57%), Gaps = 59/694 (8%)

Query: 178  CLINFYGECGD----------IVDGRR--------VFDEMSERNVVSWTSLICACARRDL 219
            C++NFY EC D          +  GR          +  + + NV SW S+I   AR   
Sbjct: 1937 CVVNFY-ECFDGITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGD 1995

Query: 220  PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
              EA+  F  + + G+ P   +  C I +C+ L +L  G          G + +  + +A
Sbjct: 1996 SVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSA 2055

Query: 280  LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP- 338
            L+DMY KCG +  A+ LF E   RN+V   ++++ YV+   A  AL +  + L       
Sbjct: 2056 LIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVE 2115

Query: 339  -------DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
                   D V M+S +SA +++         HG+V++ G +G   + NT++D Y KCG+ 
Sbjct: 2116 DGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQP 2175

Query: 392  EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             ++ ++FD         W                      M  +D ISWN+M+    Q  
Sbjct: 2176 LVSKKVFD---------W----------------------MEEKDDISWNSMIAVYAQSG 2204

Query: 452  MFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
            +  EA+E+F  M+    ++ + VT+  V  AC + GAL   K I+  + K  +  ++ + 
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264

Query: 511  TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            T+++DM+ +CG  + A + F RM++++V +WTA +    M G  ++A+++F +M+R G+K
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324

Query: 571  PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
            P+ I FV VL ACSH GLV +GWH F +M   + + P I HYGCMVDL GRAG L EA +
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384

Query: 631  LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            LIK M ++P+ V+WGSLL AC+ H+NVD+   AA+++ ELDP+  G +VLLSN+YA AG+
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 2444

Query: 691  WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
            W +V R+R+ MK + + K PG S +E+ G+VH F  GD+ HP    I   L ++   L+ 
Sbjct: 2445 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQK 2504

Query: 751  AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
             GYVP++T+VL DVDE+EK+ +L  HSEKLA+AFG+++++    I ++KNLR+C DCH+ 
Sbjct: 2505 IGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTV 2564

Query: 811  AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             KL+SK+  R+ +VRD+ RFH F+ G CSC D+W
Sbjct: 2565 IKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 212/391 (54%), Gaps = 3/391 (0%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++  C   ++L    ++ A I   G+  + L+   L+ +Y   G +  A  LF + ++  
Sbjct: 33  LLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
               N I+      GL+ +AL +   M+  G   D+ T    + A      +  G++ HG
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
            +++ G  G   + N +ID Y KCG    A ++F+ M  + VVSW ++I+GLI  GD++ 
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           AR +F E+P ++ +SW  M+ G  +    EEA+ELF+ M +E I  +  TMV +  AC  
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           +G L L + I+ Y  KN I   + L TAL+DM+++CG  + A++VF  M ++ +  W + 
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I ++ + G G++A+ LF+EM R  +KPD+I F+GVL AC H   V +G   F  MT  +G
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYG 389

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           ++P   HY CM +L  R+  L EA    K +
Sbjct: 390 IAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 249/520 (47%), Gaps = 57/520 (10%)

Query: 71   VCTCAQMGTFESLTYAQKAFDYYI--KDNETSATLFM----------YNSLIRGYSCIGL 118
            VC       F+ +TY    F      +D+   AT F           +NS+I   +  G 
Sbjct: 1936 VCVVNFYECFDGITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGD 1995

Query: 119  GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
             VEA+  +  L   G++P + +FP  + +C+       G   H      GF+ D+FV + 
Sbjct: 1996 SVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSA 2055

Query: 179  LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE----- 233
            LI+ Y +CG + D R +FDE+  RNVVSWTS+I    + +    A+ LF + +EE     
Sbjct: 2056 LIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVE 2115

Query: 234  ---GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
                +  +SV MV V+SAC+++    + + V  ++ + G   +  + N L+D Y KCG  
Sbjct: 2116 DGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQP 2175

Query: 291  DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSA 349
              +K++F   ++++ +  N++++ Y + GL+ EAL +   M+ H G R + VT+ + + A
Sbjct: 2176 LVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLA 2235

Query: 350  SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
             A  G L  G+  H  V++  LE    +  ++IDMY KCG+ EMA + FD M  K V SW
Sbjct: 2236 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 2295

Query: 410  NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
             +++AG                M GR                  +EA+++F  M+   +K
Sbjct: 2296 TAMVAGY--------------GMHGRA-----------------KEALDIFYKMVRAGVK 2324

Query: 470  VDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             + +T V V +AC + G ++    W  A   K  I   ++    +VD+F R G    A  
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384

Query: 529  VFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
            + +RM+ K D   W + +GA  +  N   GE A +   E+
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFEL 2424



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 182/363 (50%), Gaps = 44/363 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+NCK    L+Q H  I++ GL +      K++   +  G    + YA   F Y I++  
Sbjct: 34  LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHG---RIAYAILLF-YQIQNPC 89

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           T    F +N +IR  +  GL  +A+ LY  +   GI  DKFTFPFV+ ACT   +   G 
Sbjct: 90  T----FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK 145

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGE-------------------------------CG 187
            VHG+++K GF  DVFV+N LI+FY +                               CG
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
           D+ + RR+FDE+  +NVVSWT++I    R   P+EA+ LF  M  E I PN  TMV +I 
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC ++  L LG  +  Y  +  ++    +  AL+DMY KCG++  A ++F     ++L  
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMC 362
            N+++++    GL +EAL +  EM     +PD +T +  + A   + ++  G     RM 
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMT 385

Query: 363 HGY 365
             Y
Sbjct: 386 QHY 388



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 7/204 (3%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D   S  +  + ++I GY       EA+ L+  +    I P+++T   ++ ACT+   
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G  +H   +K   +  V++   LI+ Y +CG I D   VF+ M  +++ +W S+I +
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----G 269
                L +EA+ LF EM    +KP+++T + V+ AC  ++N++ G   CAY   +    G
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG---CAYFTRMTQHYG 389

Query: 270 MKANALMVNALVDMYMKCGAVDTA 293
           +         + ++Y +   +D A
Sbjct: 390 IAPIPEHYECMTELYARSNNLDEA 413



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 136/329 (41%), Gaps = 70/329 (21%)

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R  H  ++R+GL     +   +I +Y   G+   A  +F  + N    +WN +I     N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G                               + E+A+ L++ M+ + I  D+ T   V 
Sbjct: 104 G-------------------------------LSEQALMLYKNMVCQGIAADKFTFPFVI 132

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
            AC    ++DL K ++  + K G   D+ +   L+D + +CG  + A++VF +M  R+V 
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192

Query: 540 AWTAAIGAMAMEG------------------------NG-------EQAVELFNEMLRQG 568
           +WT  I  +   G                        NG       E+A+ELF  M  + 
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN 252

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD--IHGVSPQIVHYG-CMVDLLGRAGLL 625
           I P+    V ++ AC+  G++  G    R + D  I       V+ G  ++D+  + G +
Sbjct: 253 IFPNEYTMVSLIKACTEMGILTLG----RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSI 308

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            +A+++ ++MP   +   W S++ +   H
Sbjct: 309 KDAIEVFETMP-RKSLPTWNSMITSLGVH 336


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/581 (41%), Positives = 368/581 (63%), Gaps = 2/581 (0%)

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
            D++ +K +A+    ++    K G +D A  L      RN++    ++S Y R G A EA
Sbjct: 163 FDDIPVK-DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEA 221

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           +   + ML  G  PD VT++  +SA AQL DL+ GR  H  V   G+     +   +IDM
Sbjct: 222 VDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDM 281

Query: 385 YMKCGKQEMACRIFDHMSN-KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           Y KCG    A  +FD +   +   SWN++I G  K G V+ AR +F +M  RD +++N++
Sbjct: 282 YAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSL 341

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G        EA+ LF  M    ++ D  TMV + +AC  LGAL   + ++A IE+  +
Sbjct: 342 ITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLV 401

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D+ L TAL+DM+ +CG  + A  VF+ M  RDV  W+A I  +A  G G+ A+E F  
Sbjct: 402 EVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFW 461

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M   G +P+S+ ++ +LTACSH  L+++G   F  M  +H + P I HYGCM+DLLGR+G
Sbjct: 462 MKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSG 521

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
           LL EA+DL+++MP++PN VIW S+L+AC+ H++ ++A  AAE + +L+P++  V+V L N
Sbjct: 522 LLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYN 581

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           IY  + +W + +++R  M+E+G++K  G SSI V G+VH+F   D +HP++  I++M+ E
Sbjct: 582 IYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEE 641

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           +  RL+  GY P  + + +DVDE+EK++ L  HSEK+A+AFGLIS +  +P+ ++KNLR+
Sbjct: 642 ITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRV 701

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCHS  KL+S++++REIIVRD +RFH FR G+CSC+DFW
Sbjct: 702 CEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 155/601 (25%), Positives = 258/601 (42%), Gaps = 110/601 (18%)

Query: 43  KTLNELKQPHCHILKQG-LGHKPS--YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           +++ +  + H  ++  G L H PS  ++   +  C        L YA   FD        
Sbjct: 10  RSVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFD------RM 63

Query: 100 SATLFMYNSLIRGYSCIGLGVEA-ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
             + F++++ +R       G E+ + LY  +   G+  D FTF F+   C +  A     
Sbjct: 64  PCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLC 123

Query: 159 Q-VHGAIVKMGFDRDV-FVENCLINFYGECGDIVDGRRVFDEMS---------------- 200
           Q +H A  +      V  V N +I+ Y E G   D RR FD++                 
Sbjct: 124 QMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAK 183

Query: 201 ---------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
                           RNV+SWT LI   +R     EAV  F  M+ +GI+P+ VT++ +
Sbjct: 184 LGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGL 243

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG----------------- 288
           +SACA+L++L  G  +   + E GM  +  +V AL+DMY KCG                 
Sbjct: 244 LSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRR 303

Query: 289 ---------------AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
                           VD A+ LF + +DR+LV  N++++ Y+  G  REAL +  +M  
Sbjct: 304 PQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRR 363

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           H  R D  TM+S ++A A LG L  GR  H  + +  +E    +   ++DMY+KCG+ E 
Sbjct: 364 HDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEE 423

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A  +F  MS + V +W+++IAGL  NG                               M 
Sbjct: 424 ASLVFQAMSVRDVHTWSAMIAGLAFNG-------------------------------MG 452

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATA 512
           + A+E F  M  +  + + VT + + +AC +   LD  +  +  +   + I   ++    
Sbjct: 453 KAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGC 512

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           ++D+  R G    AM + R M  + +   W + + A  +  +   A      +L+  ++P
Sbjct: 513 MIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLK--LEP 570

Query: 572 D 572
           D
Sbjct: 571 D 571



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 38/328 (11%)

Query: 356 LLCGRMCHGYVLRNGL-EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           LLC +M H    R  L      + N +I MY++ G    A R FD +  K  V+W ++I+
Sbjct: 121 LLC-QMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVIS 179

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           GL K G ++ A  +    P R+ ISW  ++ G ++     EA++ F  MLS+ I+ D VT
Sbjct: 180 GLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVT 239

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF---- 530
           ++G+ SAC  L  L   + ++  + + G+    +L  AL+DM+A+CGD  RA +VF    
Sbjct: 240 VIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALG 299

Query: 531 --RR--------------------------MEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
             RR                          ME RD+  + + I      G   +A+ LF 
Sbjct: 300 RGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFM 359

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           +M R  ++ D+   V +LTAC+  G + QG  L  +  +   V   I     ++D+  + 
Sbjct: 360 QMRRHDLRADNFTMVSLLTACASLGALPQGRAL-HACIEQRLVEVDIYLGTALLDMYLKC 418

Query: 623 GLLGEALDLIKSMPVEPNDV-IWGSLLA 649
           G + EA  + ++M V   DV  W +++A
Sbjct: 419 GRVEEASLVFQAMSVR--DVHTWSAMIA 444



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 217/500 (43%), Gaps = 70/500 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +  LI GYS  G   EA+  +  +   GI PD+ T   +L+AC +      G  +H  + 
Sbjct: 205 WTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVG 264

Query: 166 KMGFDRDVFVENCLINFYGECGDI----------------------VDG----------R 193
           + G      +   LI+ Y +CGDI                      +DG          R
Sbjct: 265 EKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVAR 324

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            +FD+M +R++V++ SLI         +EA+ LF +M    ++ ++ TMV +++ACA L 
Sbjct: 325 YLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLG 384

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            L  G  + A I++  ++ +  +  AL+DMY+KCG V+ A  +F     R++   + +++
Sbjct: 385 ALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIA 444

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVT---MLSAVSASAQL--GDLLCGRMCHGYVLR 368
                G+ + AL     M + G +P+ VT   +L+A S S  L  G L    M   + +R
Sbjct: 445 GLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIR 504

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESARE 427
             +E +      MID+  + G  + A  +   M      V W S+++    + D   AR 
Sbjct: 505 PLIEHY----GCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARN 560

Query: 428 VFSEM----PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
               +    P  D + +  +         +E+A ++ R+M  ER         GV  A G
Sbjct: 561 AAEHLLKLEPDEDAV-YVQLYNIYIDSRQWEDASQIRRLM-EER---------GVKKAAG 609

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           Y  ++ +A  ++ +I  +  H  +   TA+++            ++ RR++    S  T+
Sbjct: 610 Y-SSITVAGQVHKFIVCDRTHPQIMEITAMME------------EITRRLKSVGYSPITS 656

Query: 544 AIGAMAMEGNGEQAVELFNE 563
            I     E   E A+   +E
Sbjct: 657 QITVDVDEEEKEHALLAHSE 676


>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Cucumis sativus]
          Length = 614

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/559 (42%), Positives = 352/559 (62%), Gaps = 13/559 (2%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP--RPDRVTMLSAVSAS 350
           + Q+  +C    L   N+++  Y +     ++    +++L       PD  T    V   
Sbjct: 62  SNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTC 121

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC-----RIFDHMSNKT 405
           AQ      G   HG ++++G E    + + +I MY      EM+C     R+F+ +    
Sbjct: 122 AQ-SACEAGPAVHGALIKHGFEYDPHVESGLIFMY-----AEMSCLSSCHRVFESVQKPD 175

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +V   ++++   K GD+  AR +F  MP RD +SWN M+ G  Q     EA+ LF++M  
Sbjct: 176 LVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQM 235

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           + +KV+ V+M+ V +AC +LGALD  KW +AYIEKN I   + L TALVDM+ +CG+  R
Sbjct: 236 DGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDR 295

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A++VF  M +++V  W+ AIG +AM G G++ +ELF+ M  +GI P+ I F+ VL  CS 
Sbjct: 296 ALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSV 355

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G V++G   F SM   HG+ P++ HYGCMVDL GRAG L EAL+ I +MP++P+   WG
Sbjct: 356 VGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWG 415

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC+ ++N+++  +A+ ++ E++ +  G +V LSNIYA  G W  V+ VR  MK +G
Sbjct: 416 ALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEG 475

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           I KLPG S +EVNG+VHEF SGD+SHP  + I +M  E++ RL+ AGYV    +VL D++
Sbjct: 476 ISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIE 535

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+EK+  L  HSEK+A+AFGL S  + +PIR+VKNLR+C DCH  +K++SK+++REIIVR
Sbjct: 536 EEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVR 595

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH F+ G CSC DFW
Sbjct: 596 DRNRFHHFKDGECSCKDFW 614



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 211/442 (47%), Gaps = 45/442 (10%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P+I  + +  TL ELKQ H  ++  GL +    + + V + A      +L Y+ +  D  
Sbjct: 11  PTIALIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNP-TNLLYSNQILDQC 69

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKS 151
            K      TLF  NS+IR YS      ++   Y ++  +   + PD +TF F++  C +S
Sbjct: 70  AK-----PTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQS 124

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE-------------------------- 185
            A   G  VHGA++K GF+ D  VE+ LI  Y E                          
Sbjct: 125 -ACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMV 183

Query: 186 -----CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
                CGDI   R +FD M +R+ VSW ++I   A+R   +EA+ LF  M  +G+K N V
Sbjct: 184 SACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEV 243

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           +M+ V++AC  L  L+ G    AYI++  ++    +  ALVDMY KCG VD A ++F E 
Sbjct: 244 SMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEM 303

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            ++N+   +T +      G  ++ L +   M   G  P+ +T +S +   + +G +  GR
Sbjct: 304 NEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGR 363

Query: 361 MCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV-SWNSLIAG--L 416
                + R+ G+E        M+D+Y + G+ E A    + M  K    +W +L+    +
Sbjct: 364 SHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRM 423

Query: 417 IKNGDV-ESAREVFSEMPGRDH 437
            KN ++ E A     E+ G++H
Sbjct: 424 YKNMELGEFASRKLIEVEGKNH 445


>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Glycine max]
          Length = 622

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/514 (44%), Positives = 336/514 (65%), Gaps = 1/514 (0%)

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
           L  G  PD +T    V A AQL +   G   HG  +++G E    + N+++ MY   G  
Sbjct: 109 LRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDI 168

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             A  +F  M    VVSW  +IAG  + GD +SARE+F  MP R+ ++W+TM+ G  + N
Sbjct: 169 NAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNN 228

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
            FE+A+E F  + +E +  +   MVGV S+C +LGAL + +  + Y+ +N +  ++ L T
Sbjct: 229 CFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGT 288

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           A+VDM+ARCG+ ++A+ VF ++ ++DV  WTA I  +AM G  E+A+  F+EM ++G  P
Sbjct: 289 AVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVP 348

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
             I F  VLTACSH G+V +G  +F SM   HGV P++ HYGCMVDLLGRAG L +A   
Sbjct: 349 RDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKF 408

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           +  MPV+PN  IW +LL AC+ H+NV++     + + E+ PE SG +VLLSNIYA A KW
Sbjct: 409 VLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKW 468

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNC-RLRD 750
            +V  +R  MK++G+RK PG S IE++GKVHEFT GD++HPE+  I  +  ++   +++ 
Sbjct: 469 KDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKL 528

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           AGYV +    + D+DE+EK+  L  HSEKLA+A+G++      PIR+VKNLR+C DCH+ 
Sbjct: 529 AGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTA 588

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KL+SKV++ E+IVRD NRFH F++G+CSC D+W
Sbjct: 589 TKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 198/435 (45%), Gaps = 39/435 (8%)

Query: 27  KTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           KT    +P +  L+ C    +LK  H H+L+  L       S+++  C    T   L YA
Sbjct: 12  KTLRLKNPKLVLLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCID-STTNLLHYA 70

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
            +     +     +  LF+YN+LIRG S       +   Y++   FG+LPD  T PF++ 
Sbjct: 71  IR-----VASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVK 125

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN----------------------------- 177
           AC +      G+Q HG  +K GF++D +V+N                             
Sbjct: 126 ACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVS 185

Query: 178 --CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI 235
             C+I  Y  CGD    R +FD M ERN+V+W+++I   AR +  ++AV  F  +  EG+
Sbjct: 186 WTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGV 245

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
             N   MV VIS+CA L  L +G++   Y+    +  N ++  A+VDMY +CG V+ A  
Sbjct: 246 VANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVM 305

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F +  +++++    +++     G A +AL    EM   G  P  +T  + ++A +  G 
Sbjct: 306 VFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGM 365

Query: 356 LLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLI 413
           +  G      + R+ G+E        M+D+  + GK   A +    M  K     W +L+
Sbjct: 366 VERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALL 425

Query: 414 AGLIKNGDVESAREV 428
                + +VE    V
Sbjct: 426 GACRIHKNVEVGERV 440



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/446 (23%), Positives = 193/446 (43%), Gaps = 75/446 (16%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR-----RVFDEMSERNVVSWTSLICAC 214
           +H  +++     DVF  + LI F   C D          RV  ++   N+  + +LI  C
Sbjct: 36  IHAHMLRTHLFFDVFAASRLIAF---CIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGC 92

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           +  + P+ + + + + +  G+ P+++T   ++ ACA+L+N  +G +      + G + + 
Sbjct: 93  STSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDF 152

Query: 275 LMVNALVDMYM-------------------------------KCGAVDTAKQLFGECKDR 303
            + N+LV MY                                +CG   +A++LF    +R
Sbjct: 153 YVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPER 212

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           NLV  +T++S Y R     +A+   + +   G   +   M+  +S+ A LG L  G   H
Sbjct: 213 NLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAH 272

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
            YV+RN L     +   ++DMY +CG  E A  +F+ +  K V+ W +LIAGL  +G  E
Sbjct: 273 EYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAE 332

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
            A   FSEM  +  +  +                               +T   V +AC 
Sbjct: 333 KALWYFSEMAKKGFVPRD-------------------------------ITFTAVLTACS 361

Query: 484 YLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
           + G ++    I+  ++++ G+   ++    +VD+  R G  ++A +   +M  K +   W
Sbjct: 362 HAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIW 421

Query: 542 TAAIGAMAMEGN---GEQAVELFNEM 564
            A +GA  +  N   GE+  ++  EM
Sbjct: 422 RALLGACRIHKNVEVGERVGKILLEM 447



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 33/269 (12%)

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A  V S++   +   +N ++ G +     E +   +   L   +  D +T   +  AC  
Sbjct: 70  AIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQ 129

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA-------------------------- 518
           L    +    +    K+G   D  +  +LV M+A                          
Sbjct: 130 LENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCM 189

Query: 519 -----RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
                RCGD + A ++F RM +R++  W+  I   A     E+AVE F  +  +G+  + 
Sbjct: 190 IAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANE 249

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
            V VGV+++C+H G +  G      +   + +S  ++    +VD+  R G + +A+ + +
Sbjct: 250 TVMVGVISSCAHLGALAMGEKAHEYVMR-NKLSLNLILGTAVVDMYARCGNVEKAVMVFE 308

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
            +P E + + W +L+A    H   + A +
Sbjct: 309 QLP-EKDVLCWTALIAGLAMHGYAEKALW 336


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/739 (34%), Positives = 407/739 (55%), Gaps = 31/739 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+L+ GY+ +G G + + L+ ++        KFT   VL  C  + +  EG  +H   +
Sbjct: 19  WNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALAL 78

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + G + D F+   L++ Y +CG + D  +VF ++   +VV+W+++I    ++   +EA  
Sbjct: 79  RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAE 138

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF  M  +G +PN  T+  ++S    + +L  G  +   I + G +++ L+ N L+ MYM
Sbjct: 139 LFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYM 198

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K   V+   ++F    + +LV  N ++S +           I  +MLL G +P+  T +S
Sbjct: 199 KSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFIS 258

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + + + L D   G+  H ++++N  +  D +   ++DMY K    E A   FD + N  
Sbjct: 259 VLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVN-- 316

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                                        RD  SW  ++ G  Q +  E+A++ FR M  
Sbjct: 317 -----------------------------RDIFSWTVIISGYAQTDQAEKAVKYFRQMQR 347

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E IK +  T+    S C ++  L+  + ++A   K G   D+ + +ALVD++ +CG  + 
Sbjct: 348 EGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEH 407

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A  +F+ +  RD+ +W   I   +  G GE+A+E F  ML +GI PD   F+GVL+ACS 
Sbjct: 408 AEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSF 467

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV +G   F SM+ I+G++P I HY CMVD+LGRAG   E    I+ M + P  +IW 
Sbjct: 468 MGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWE 527

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           ++L AC+ H NVD    AA+++ E++P     ++LLSNI+AS G+W +V  +R  M  +G
Sbjct: 528 TVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRG 587

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           I+K PG S +EV+G+VH F S D SHP++  I + L ++   L   GYVP    VL +V 
Sbjct: 588 IKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVS 647

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
            +EK   L +HSE+LA++F L+ST+   PIR+ KNLR+C DCH F KL+S + ++EI+VR
Sbjct: 648 NKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVR 707

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D  RFH F++G+CSC D W
Sbjct: 708 DIRRFHHFKRGTCSCQDRW 726



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 223/467 (47%), Gaps = 45/467 (9%)

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           R+F  M E+N VSW +L+   A+    K+ + LF +M E   K +  T+  V+  CA   
Sbjct: 6   RLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTG 65

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +L  G  + A     G + +  +  +LVDMY KCG V  A ++F + ++ ++V  + +++
Sbjct: 66  SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMIT 125

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
              + G  +EA  +   M   G RP++ T+ S VS +  +GDL  G+  HG + + G E 
Sbjct: 126 GLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFES 185

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
            + + N +I MYMK    E   ++F+ M+N  +VSWN+L++G              S+  
Sbjct: 186 DNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYD-----------SQTC 234

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
           GR                       +F  ML E  K +  T + V  +C  L   +  K 
Sbjct: 235 GR--------------------GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQ 274

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++A+I KN    D  + TALVDM+A+    + A   F R+  RD+ +WT  I   A    
Sbjct: 275 VHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQ 334

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
            E+AV+ F +M R+GIKP+       L+ CSH   +  G  L       H V+ +  H+G
Sbjct: 335 AEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL-------HAVAVKAGHFG 387

Query: 614 ------CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
                  +VDL G+ G +  A  + K + +  + V W ++++   +H
Sbjct: 388 DIFVGSALVDLYGKCGCMEHAEAIFKGL-ISRDIVSWNTIISGYSQH 433



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 31/295 (10%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           ++ A++LF    ++N V  N +++ Y +LG  ++ L +  +M     +  + T+ + +  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            A  G L  G++ H   LR+G E  + +  +++DMY KCG    A ++F  + N  VV+W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           +++I G                               L Q+   +EA ELF +M  +  +
Sbjct: 121 SAMITG-------------------------------LDQQGHGQEAAELFHLMRRKGAR 149

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            ++ T+  + S    +G L   + I+  I K G   D  ++  L+ M+ +    +   +V
Sbjct: 150 PNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKV 209

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
           F  M   D+ +W A +          +   +F +ML +G KP+   F+ VL +CS
Sbjct: 210 FEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCS 264



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 24/246 (9%)

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           +E A  +F  MP ++ +SWN +L G  Q    ++ ++LF  M     K  + T+  V   
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C   G+L   K ++A   ++G   D  L  +LVDM+++CG    A++VF ++   DV AW
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           +A I  +  +G+G++A ELF+ M R+G +P+      +++  ++ G +  G         
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYG-------QS 173

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE-----------PNDVIWGSLLAA 650
           IHG    I  YG   D L    L+   +  +KS  VE           P+ V W +LL+ 
Sbjct: 174 IHGC---ICKYGFESDNLVSNPLI---MMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSG 227

Query: 651 CQKHQN 656
               Q 
Sbjct: 228 FYDSQT 233



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 12/268 (4%)

Query: 36  IGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           I  L++C +L +    KQ H HI+K          + +V   A+    E    A  AFD 
Sbjct: 257 ISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLED---AGVAFDR 313

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
            +  +     +F +  +I GY+      +A+  + ++   GI P+++T    L+ C+  +
Sbjct: 314 LVNRD-----IFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMA 368

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G Q+H   VK G   D+FV + L++ YG+CG +     +F  +  R++VSW ++I 
Sbjct: 369 TLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIIS 428

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMK 271
             ++    ++A+  F  M+ EGI P+  T + V+SAC+ +  +E G +    + ++ G+ 
Sbjct: 429 GYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGIN 488

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGE 299
            +      +VD+  + G  +  K    E
Sbjct: 489 PSIEHYACMVDILGRAGKFNEVKIFIEE 516


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 273/775 (35%), Positives = 423/775 (54%), Gaps = 50/775 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGE---GVQVH 161
           +N+L+ GY      + ++  +V +   G   P+ FTF + + +C    A GE    +Q+ 
Sbjct: 105 WNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSC---GALGERSLALQLL 161

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF------------------------- 196
           G + K G   D  V   L++ +  CG +    R+F                         
Sbjct: 162 GMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVD 221

Query: 197 ------DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
                 D M ER+VVSW  ++ A ++    +EA+ +  +M  +G++ +S T    ++ACA
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
           +L +L  G ++ A +       +  + +ALV++Y KCG    AK +F    DRN V    
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTV 341

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++ +++ G   E++ + ++M       D+  + + +S      DL  GR  H   L++G
Sbjct: 342 LIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 401

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
                 + N++I MY KC   + A  IF  M+ K +VSW S+I    + G++  ARE F 
Sbjct: 402 QIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFD 461

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVASACGYLGALD 489
            M  ++ I+WN MLG   Q    E+ + ++ VMLSE+ ++ D VT V +   C  LGA  
Sbjct: 462 GMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANK 521

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
           L   I     K G+  D  +A A++ M+++CG    A +VF  +  +D+ +W A I   +
Sbjct: 522 LGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYS 581

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
             G G+QA+E+F+++L++G KPD I +V VL+ CSH GLV +G   F  M  +H +SP +
Sbjct: 582 QHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGL 641

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            H+ CMVDLLGRAG L EA DLI  MP++P   +WG+LL+AC+ H N ++A  AA+ + E
Sbjct: 642 EHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFE 701

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           LD   SG ++L++ IYA AGK  + A++R  M+++GI+K PG S +EVN KVH F + D 
Sbjct: 702 LDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDV 761

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SHP++  I   L E+  ++   GYV        D    E      HHSEKLA+AFGL+S 
Sbjct: 762 SHPQVIAIRKKLDELMEKIARLGYVRT------DSPRSE-----IHHSEKLAVAFGLMSL 810

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              MPI ++KNLR+C DCH+  KL+S V  RE ++RD  RFH F  GSCSC D+W
Sbjct: 811 PAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 228/538 (42%), Gaps = 101/538 (18%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV---- 195
            F   L +C    A      +HG +V +G    VF++N L++ Y  CG + D RR+    
Sbjct: 6   AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65

Query: 196 ----------------------------FDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
                                       F  M  R+V SW +L+    +      ++  F
Sbjct: 66  IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125

Query: 228 FEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
             M   G   PN+ T    + +C  L    L  ++   + + G + ++ +  ALVDM+++
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL---------------------------- 318
           CG VD A +LF   K+  +   N+++  YV+                             
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245

Query: 319 ---GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
              G  REAL ++ +M   G R D  T  S+++A A+L  L  G+  H  V+RN L   D
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LPCID 304

Query: 376 S-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + + ++++Y KCG  + A  +F+ + ++  V+W  LIAG +++G              
Sbjct: 305 PYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHG-------------- 350

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
                             F E++ELF  M +E + +D+  +  + S C     L L + +
Sbjct: 351 -----------------CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 393

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           ++   K+G    + ++ +L+ M+A+C + Q A  +FR M ++D+ +WT+ I A +  GN 
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNI 453

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            +A E F+ M  + +    I +  +L A    G    G  ++  M     V P  V Y
Sbjct: 454 AKAREFFDGMSTKNV----ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTY 507



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 191/389 (49%), Gaps = 9/389 (2%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N +  N +++ Y+K G +  A +LFG    R++   NT+MS Y +   +++ LA L+  +
Sbjct: 70  NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQ---SQQYLASLESFV 126

Query: 333 -LH---GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +H      P+  T   A+ +   LG+        G V + G +    +   ++DM+++C
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G  ++A R+F  +   T+   NS++ G +K   V+ A E+F  MP RD +SWN M+  L+
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           Q     EA+++   M S+ +++D  T     +AC  L +L   K ++A + +N    D  
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPY 306

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +A+ALV+++A+CG  + A  VF  +  R+  AWT  I      G   ++VELFN+M  + 
Sbjct: 307 VASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAEL 366

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           +  D      +++ C     +  G  L  S+    G    +V    ++ +  +   L  A
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQL-HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
             + + M  E + V W S++ A  +  N+
Sbjct: 426 ESIFRFMN-EKDIVSWTSMITAHSQVGNI 453



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 150/326 (46%), Gaps = 37/326 (11%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF-DHMSNKTVVSWNSLIAGLIKNGD 421
           HG ++  GL     + NT++  Y+ CG    A R+    +++  V++ N ++ G +K G 
Sbjct: 27  HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM-LSERIKVDRVTMVGVAS 480
           +  A E+F  MP RD  SWNT++ G  Q   +  ++E F  M  S     +  T      
Sbjct: 87  LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG-------------DP---- 523
           +CG LG   LA  +   ++K G   D  +A ALVDMF RCG             +P    
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206

Query: 524 --------------QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
                           A+++F  M +RDV +W   + A++  G   +A+++  +M  +G+
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLF-RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           + DS  +   LTAC+    +  G  L  + + ++  + P +     +V+L  + G   EA
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVA--SALVELYAKCGCFKEA 324

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKH 654
             +  S+  + N+V W  L+A   +H
Sbjct: 325 KGVFNSLH-DRNNVAWTVLIAGFLQH 349



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 112/217 (51%), Gaps = 10/217 (4%)

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLN 146
           KA +++  D  ++  +  +N+++  Y   G   + + +Y V L+   + PD  T+  +  
Sbjct: 455 KAREFF--DGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFK 512

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
            C    A   G Q+ G  VK+G   D  V N +I  Y +CG I++ R+VFD ++ +++VS
Sbjct: 513 GCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVS 572

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W ++I   ++  + K+A+ +F ++++ G KP+ ++ V V+S C+    ++ G    +Y D
Sbjct: 573 WNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK---SYFD 629

Query: 267 ELGMKANAL----MVNALVDMYMKCGAVDTAKQLFGE 299
            +    N        + +VD+  + G +  AK L  E
Sbjct: 630 MMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDE 666


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/651 (37%), Positives = 383/651 (58%), Gaps = 1/651 (0%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQ 253
           VF ++   +      L+   +R   P++ ++L+  +        +  +   ++ A +K+ 
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
               G  +     +LG   +  +   L+ MY  C  +  A+ LF +    + V  N I+ 
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y + G   +AL + ++M     +PD V + + +SA    G+L  GR  H +V  NG   
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              +   +I+MY  CG  ++A +I+D +S+K ++   ++++G  K G V+ AR +F +M 
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
            RD + W+ M+ G  + +  +EA++LF  ML +R   D++TM+ V SAC ++GAL  A W
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+ Y++++G    + +  AL+DM+A+CG+  +A +VF  M +++V +W++ I A AM GN
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
            + A++LF  M    I+P+ + F+GVL AC H GLV +G  LF SM + HG+SP   HYG
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVDL  RA  L +A++LI++MP  PN +IWGSL++ACQ H   ++  +AA+R+ EL+P+
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPD 555

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G  V+LSNIYA   +W +V  +R  M  +GI K   SS IE+N +VH F   D  H +
Sbjct: 556 HDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQ 615

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
            + I   L E+  +L+  GY P  + +L+D++E++KK L+  HSEKLA+ +GLIS     
Sbjct: 616 SDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNES 675

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            IR+VKNLR+C DCHSF KLVSKVY  EI+VRD  RFH    G CSC D+W
Sbjct: 676 CIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 232/483 (48%), Gaps = 65/483 (13%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILP-DKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           N L+R  S      + I LY  L        D+F+FP +L A +K SAF  G+++HG   
Sbjct: 89  NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+GF  D F++  LI  Y  C  I+D R +FD+M   + V+W  +I    +     +A+ 
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF +M    +KP+SV +  V+SAC    NL  G  +  ++ + G   ++ +  AL++MY 
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR----------------------- 322
            CGA+D A++++     ++L++   ++S Y +LG+ +                       
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328

Query: 323 --------EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
                   EAL + DEML     PD++TMLS +SA + +G L      H YV R+G    
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA 388

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
            S+ N +IDMY KCG    A  +F++M  K V+SW+S+I     +G+ +S          
Sbjct: 389 LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADS---------- 438

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
                                A++LFR M    I+ + VT +GV  ACG+ G ++  + +
Sbjct: 439 ---------------------AIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKL 477

Query: 495 Y-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEG 552
           + + I ++GI    +    +VD++ R    ++A+++   M    +V  W + + A  + G
Sbjct: 478 FSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHG 537

Query: 553 NGE 555
             E
Sbjct: 538 EAE 540



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 166/368 (45%), Gaps = 37/368 (10%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N +I GY   G   +A+ L+ ++    + PD      VL+AC  +     G  +H  + 
Sbjct: 190 WNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVK 249

Query: 166 KMGFDRDVFVENCLINFYGECGD-------------------------------IVDGRR 194
             G+  D  ++  LIN Y  CG                                + D R 
Sbjct: 250 DNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARF 309

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +FD+M ER++V W+++I   A  D P+EA+ LF EM+++   P+ +TM+ VISAC+ +  
Sbjct: 310 IFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGA 369

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L   + +  Y+D  G      + NAL+DMY KCG +  A+++F     +N++  +++++ 
Sbjct: 370 LAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 429

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEG 373
           +   G A  A+ +   M      P+ VT +  + A    G +  G ++    +  +G+  
Sbjct: 430 FAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISP 489

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREV 428
                  M+D+Y +      A  + + M     V+ W SL++    +G+ E    +A+ +
Sbjct: 490 TREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRL 549

Query: 429 FSEMPGRD 436
               P  D
Sbjct: 550 LELEPDHD 557



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 3/228 (1%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++ + A +  +  L   + A   +I D      L  ++++I GY+      EA+ L+ E+
Sbjct: 288 LIVSTAMLSGYAKLGMVKDA--RFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEM 345

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
                +PD+ T   V++AC+   A  +   +H  + + GF R + V N LI+ Y +CG++
Sbjct: 346 LQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNL 405

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
           V  R VF+ M  +NV+SW+S+I A A       A+ LF  M E  I+PN VT + V+ AC
Sbjct: 406 VKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYAC 465

Query: 250 AKLQNLELGDRV-CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
                +E G+++  + I+E G+         +VD+Y +   +  A +L
Sbjct: 466 GHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIEL 513


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/757 (35%), Positives = 396/757 (52%), Gaps = 104/757 (13%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  VL  C    +F +G +VH  I       D  +   L++FY  CGD+ +GRRVFD M
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI---KPNSV---------------- 240
            ++NV  W  ++   A+    KE++ LF  MVE+GI   +P S                 
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220

Query: 241 --------------------------------TMVCVISACAKLQNLELGDRVCAYIDEL 268
                                           T++ V+  CA    L LG  V +   + 
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
             +      N L+DMY KCG +D A ++F +  +RN+V   ++++ Y R G +  A+ +L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +M   G + D V + S + A A+ G L  G+  H Y+  N +E    +CN ++DMY KC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G                                +E+A  VFS M  +D ISWNTM+G L 
Sbjct: 401 G-------------------------------SMEAANSVFSTMVVKDIISWNTMIGEL- 428

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
                               K D  TM  V  AC  L AL+  K I+ YI +NG   D  
Sbjct: 429 --------------------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRH 468

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +A ALVD++ +CG    A  +F  +  +D+ +WT  I    M G G +A+  FNEM   G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           I+PD + F+ +L ACSH GL+ QGW  F  M +   + P++ HY CMVDLL R G L +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
            + ++++P+ P+  IWG+LL  C+ + ++++A   AER+ EL+PE +G +VLL+NIYA A
Sbjct: 589 YEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEA 648

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG-DESHPEMNNISSMLREMNCR 747
            KW  V R+R ++ +QG+RK PG S IE+ GKV+ F SG + SHP   NI S+L++M  +
Sbjct: 649 EKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRK 708

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +++ G+ P     L++ DE +K+  L  HSEKLAMAFGL++      IRV KNLR+C DC
Sbjct: 709 MKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDC 768

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H  AK +SK   REI++RD+NRFH F+ G CSC  FW
Sbjct: 769 HEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 217/462 (46%), Gaps = 58/462 (12%)

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           + AF+ +  D      +  +NS+I GY   GL    + +Y ++   GI  D  T   VL 
Sbjct: 202 ESAFELF--DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
            C  S     G  VH   +K  F+R +   N L++ Y +CGD+    RVF++M ERNVVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           WTS+I    R      A+ L  +M +EG+K + V +  ++ ACA+  +L+ G  V  YI 
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
              M++N  + NAL+DMY KCG+++ A  +F     ++++  NT++              
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL----------- 428

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
                     +PD  TM   + A A L  L  G+  HGY+LRNG      + N ++D+Y+
Sbjct: 429 ----------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG   +A  +FD + +K +VSW  +IAG   +G    A   F+EM  RD          
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM--RD---------- 526

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                                I+ D V+ + +  AC + G L+   W + YI KN  + +
Sbjct: 527 -------------------AGIEPDEVSFISILYACSHSGLLEQG-WRFFYIMKNDFNIE 566

Query: 507 MQLA--TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
            +L     +VD+ +R G+  +A +    +    D + W A +
Sbjct: 567 PKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALL 608



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 62/304 (20%)

Query: 430 SEMPGR--DH--ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           S  P R  DH    +N  +    Q    E AMEL  + + ++ +++  T   V   C  L
Sbjct: 55  SATPTRTIDHQVTDYNAKILHFCQLGDLENAMEL--ICMCQKSELETKTYGSVLQLCAGL 112

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
            +    K +++ I+ N +  D  L   LV  +A CGD +   +VF  MEK++V  W   +
Sbjct: 113 KSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMV 172

Query: 546 GAMAMEGNGEQAVELFNEMLRQGI---KPDS-------------IVFVGVLTACSHGGLV 589
              A  G+ ++++ LF  M+ +GI   +P+S             I +  +++     GL 
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLT 232

Query: 590 NQGWHLFRSM----TDIHGVSPQIVHYGC------------------------------M 615
            +G  +++ M     D+   +   V  GC                              +
Sbjct: 233 ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 292

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           +D+  + G L  AL + + M  E N V W S++A   +    D A    +++     EK 
Sbjct: 293 LDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIKLLQQM-----EKE 346

Query: 676 GVHV 679
           GV +
Sbjct: 347 GVKL 350


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/571 (42%), Positives = 359/571 (62%), Gaps = 13/571 (2%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K   +  A+ +F   + R+L+  NTI+  YV    + + + +  E L+H   PD  T+  
Sbjct: 62  KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHE-LVHEYLPDNFTLPC 120

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +   A+LG +  G+  HG  L+ G      +  ++++MY KCG+ + A ++FD M +K 
Sbjct: 121 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 180

Query: 406 VV-----------SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
           VV           SWN++I G +K+GD +SA E+F +MP  D ++WN M+ G      F 
Sbjct: 181 VVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFM 240

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           +A+++F +ML    +    T+V V SA   L  L   +WI++Y+EKNG   D  L T+L+
Sbjct: 241 DAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLI 300

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           +M+A+CG  + A+ VFR ++K+ V  WTA I  + + G    A+ LF EM + G+KP++I
Sbjct: 301 EMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAI 360

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
           +F+GVL AC+H GLV+ G   F  M + + + P + HYGC+VD+L RAG L EA + I++
Sbjct: 361 IFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIEN 420

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+ PN VIW SLL   + H  +DI  YAA+R+ E+ PE  G ++LLSN+YA++G W  V
Sbjct: 421 MPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKV 480

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           + VR  M ++G RK PG SS+E  G +HEF  GD SHP+   I + + EM  +L+  G+V
Sbjct: 481 SHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHV 540

Query: 755 PDLTNVLLDVD-EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           PD T VLL ++ E+EK+  L +HSE+LA+AFGLI+    +PIR++KNLR+C DCHS  KL
Sbjct: 541 PDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKL 600

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +SK+Y REIIVRDN RFH F+ GSCSC D+W
Sbjct: 601 LSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 221/500 (44%), Gaps = 65/500 (13%)

Query: 20  LTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGT 79
           LT  H  +     +  +   + C    E++Q H   LK  + + P ++S  +        
Sbjct: 4   LTPFHSLQQYLPHNLHLSLFQTCSAPQEVEQLHAFSLKTAIFNHP-FVSSRLLALYSDPK 62

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
              L YA+  FD   +      +L  +N++I+ Y       + I L+ EL     LPD F
Sbjct: 63  INDLGYARSIFDRIQR-----RSLIHWNTIIKCYVENQFSHDGIVLFHELV-HEYLPDNF 116

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T P V+  C +     EG Q+HG  +K+GF  DVFV+  L+N Y +CG+I   R+VFD M
Sbjct: 117 TLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM 176

Query: 200 SERNVVSWTSLI---------------------------------------CACARRDLP 220
            +++VV W SLI                                          A  +L 
Sbjct: 177 IDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELN 236

Query: 221 KE---AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            +   AV +FF M++ G +P+  T+V V+SA + L  L  G  + +Y+++ G + + ++ 
Sbjct: 237 GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG 296

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
            +L++MY KCG +++A  +F   + + +     I+      G+A  ALA+  EM   G +
Sbjct: 297 TSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLK 356

Query: 338 PDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           P+ +  +  ++A    G +  GR     M + Y +   LE +      ++D+  + G  E
Sbjct: 357 PNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHY----GCLVDILCRAGHLE 412

Query: 393 MACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLGGL 447
            A    ++M  +   V W SL+ G   +G ++    +A+ V    P  + I    +L  +
Sbjct: 413 EAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAP--ETIGCYILLSNM 470

Query: 448 TQENMFEEAMELFRVMLSER 467
              +   E +   R M+ +R
Sbjct: 471 YAASGMWEKVSHVREMMYKR 490



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 203/492 (41%), Gaps = 81/492 (16%)

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE- 185
           ++L  F  L         L+     SA  E  Q+H   +K       FV + L+  Y + 
Sbjct: 2   LKLTPFHSLQQYLPHNLHLSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDP 61

Query: 186 -CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
              D+   R +FD +  R+++ W ++I          + + LF E+V E + P++ T+ C
Sbjct: 62  KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPC 120

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           VI  CA+L  ++ G ++     ++G  ++  +  +LV+MY KCG +D A+++F    D++
Sbjct: 121 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 180

Query: 305 LVLCNTI-----------MSNYVRLGLAREALAILDE----------------------- 330
           +VL N++           ++ Y++ G    AL +  +                       
Sbjct: 181 VVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFM 240

Query: 331 --------MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
                   ML  G RP   T++S +SA + L  L  GR  H Y+ +NG E    +  ++I
Sbjct: 241 DAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLI 300

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           +MY KCG  E A  +F  +  K V  W ++I GL  +G                      
Sbjct: 301 EMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHG---------------------- 338

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKN 501
                    M   A+ LF  M    +K + +  +GV +AC + G +D  +  +   + + 
Sbjct: 339 ---------MANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEY 389

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQA 557
            I   ++    LVD+  R G  + A      M    +   W + +G     G    GE A
Sbjct: 390 KIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYA 449

Query: 558 VELFNEMLRQGI 569
            +   E+  + I
Sbjct: 450 AQRVIEVAPETI 461


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/568 (41%), Positives = 353/568 (62%), Gaps = 4/568 (0%)

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           ++ L   Y   G +D +  LFG  ++ ++     I+  +   GL  +AL    +ML  G 
Sbjct: 12  LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            P+  T     S+  +L  +  G+  H   ++ G +    +   ++D+Y + G    A +
Sbjct: 72  EPNAFTF----SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +FD M  K++VS  +++    K+G++++AR +F  M  RD + WN M+ G TQ  M  EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + LFR ML  + K + VT++ V SACG LGAL+  +W+++YIE NGI  ++ + TALVDM
Sbjct: 188 LVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDM 247

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +++CG  + A  VF +++ +DV AW + I   AM G  ++A++LF  M R G+ P +I F
Sbjct: 248 YSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITF 307

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +G+L+AC H G V +GW +F  M D +G+ P+I HYGCMV+LLGRAG + +A +L+K+M 
Sbjct: 308 IGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN 367

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           +EP+ V+WG+LL AC+ H  + +     E + + +   SG ++LLSNIYA+ G W  VAR
Sbjct: 368 IEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVAR 427

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R  MK+ G++K PG SSIEVN KVHEF +G  +HP+   I  ML E+N  L+  GY P 
Sbjct: 428 LRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQ 487

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
              VL D+ E EK+  L  HSEKLA+AFGLI+T     I++VKNLR+C DCH   KL+SK
Sbjct: 488 TDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISK 547

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  R+I+VRD NRFH F  GSCSC D+W
Sbjct: 548 ITGRKIVVRDRNRFHHFVNGSCSCGDYW 575



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 186/378 (49%), Gaps = 66/378 (17%)

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           + ++F + ++I G++  GL  +A++ Y ++   G+ P+ FTF  +L  C        G  
Sbjct: 37  NPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKA 92

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR--- 216
           +H   VK+GFD D++V   L++ Y   GD+V  +++FD M E+++VS T+++   A+   
Sbjct: 93  LHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGE 152

Query: 217 -------------RD---------------LPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
                        RD               +P EA+ LF  M++   KPN VT++ V+SA
Sbjct: 153 LDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSA 212

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C +L  LE G  V +YI+  G++ N  +  ALVDMY KCG+++ A+ +F +  D+++V  
Sbjct: 213 CGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAW 272

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N+++  Y   G ++EAL +   M   G  P  +T +  +SA        CG    G+V  
Sbjct: 273 NSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSA--------CGH--SGWV-- 320

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
              EGWD I N M D Y    K E                +  ++  L + G VE A E+
Sbjct: 321 --TEGWD-IFNKMKDEYGIEPKIE---------------HYGCMVNLLGRAGHVEQAYEL 362

Query: 429 FSEMPGR-DHISWNTMLG 445
              M    D + W T+LG
Sbjct: 363 VKNMNIEPDPVLWGTLLG 380



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 190/415 (45%), Gaps = 71/415 (17%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y   G +     +F      +V  WT++I   A R L ++A+  + +M+ +G++PN+ T 
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
             ++  C     +E G  + +   +LG  ++  +   L+D+Y + G V +A+QLF    +
Sbjct: 79  SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 303 RNLV------------------------------LC-NTIMSNYVRLGLAREALAILDEM 331
           ++LV                              +C N ++  Y + G+  EAL +   M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
           L    +P+ VT+LS +SA  QLG L  GR  H Y+  NG++    +   ++DMY KCG  
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           E A  +FD + +K VV+WNS+I G    G        FS                     
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXG--------FS--------------------- 285

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLA 510
             +EA++LF+ M    +    +T +G+ SACG+ G +     I+  + ++ GI   ++  
Sbjct: 286 --QEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHY 343

Query: 511 TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELF 561
             +V++  R G  ++A ++ + M  + D   W   +GA  + G    GE+ VEL 
Sbjct: 344 GCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL 398


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/661 (38%), Positives = 390/661 (59%), Gaps = 42/661 (6%)

Query: 195 VFDEMSER-NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           +F++  +R +V SW SLI   AR     E++  F  M +  IKPN  T  C I +C+ L 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +L  G +        G +++  + +AL+DMY KCG +  A+ LF E   RN+V   ++++
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 314 NYVRLGLAREALAILDEMLLH---------GPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
            YV+   A EAL +  E L           G   D V M+S +SA +++ +       HG
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
             ++ GL+    + NT++D Y KCG                               +V  
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCG-------------------------------EVSL 245

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI-KVDRVTMVGVASACG 483
           +R+VF +M  +D +SWN+M+    Q  +  +A E+F  ML     K + VT+  +  AC 
Sbjct: 246 SRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACA 305

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           + GAL +   ++  + K G   ++ +AT+++DM+ +CG  + A   F  M++++V +WTA
Sbjct: 306 HEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTA 365

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I    M G   +A+++F +M+  G+KP+ I F+ VL ACSH G + +GW  F +M+  +
Sbjct: 366 MIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEY 425

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
            V P + HYGCMVDLLGRAG + EA +LIKSM V  + V+WGSLLAAC+ H++V++A  +
Sbjct: 426 NVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEIS 485

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
           A  + +LDP   G +VLL+NIYA AG+W +V R+R+ +K++G+ K PG S +E+ G+VH 
Sbjct: 486 ARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHV 545

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F  GD+ HP+   I   L E++ +L++AGYVP++ +VL DVDE+EK+ ++  HSEKLA+A
Sbjct: 546 FLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVA 605

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           FG++++     I V+KNLR+C DCH+  KL+SK+  REIIVRD  RFH F+ G CSC D+
Sbjct: 606 FGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDY 665

Query: 844 W 844
           W
Sbjct: 666 W 666



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 231/475 (48%), Gaps = 47/475 (9%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           ++ +NSLI   +  G   E++  +  +    I P++ TFP  + +C+       G Q H 
Sbjct: 47  VYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQ 106

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             +  GF+ D+FV + LI+ Y +CG + + R +FDE+  RN+V+WTSLI    + D   E
Sbjct: 107 QALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHE 166

Query: 223 AVYLFFEMV---------EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           A+ +F E +         E G   +SV M+ V+SAC+++ N  + + V     ++G+   
Sbjct: 167 ALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKV 226

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML- 332
             + N L+D Y KCG V  ++++F +  ++++V  N++++ Y + GL+ +A  +   ML 
Sbjct: 227 MGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLK 286

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G + + VT+ + + A A  G L  G   H  V++ G      +  ++IDMY KCG+ E
Sbjct: 287 AGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAE 346

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           MA   FD M  K V SW ++IAG   +G                                
Sbjct: 347 MARNAFDGMKEKNVRSWTAMIAGYGMHG-------------------------------F 375

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLAT 511
             EA+++F  M+   +K + +T + V +AC + G L+   +W  A   +  +   ++   
Sbjct: 376 AREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYG 435

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE----QAVELF 561
            +VD+  R G  + A  + + M+ +RD   W + + A  +  + E     A ELF
Sbjct: 436 CMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELF 490



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 5/222 (2%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSA 153
           D+     +  +NS+I  Y+  GL  +A  ++  +  AG G   ++ T   +L AC    A
Sbjct: 251 DDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKY-NEVTLSTLLLACAHEGA 309

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G+ +H  ++KMG+  +V +   +I+ Y +CG     R  FD M E+NV SWT++I  
Sbjct: 310 LRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAG 369

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR-VCAYIDELGMKA 272
                  +EA+ +F++M+  G+KPN +T + V++AC+    LE G R   A   E  ++ 
Sbjct: 370 YGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEP 429

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECK-DRNLVLCNTIMS 313
                  +VD+  + G +  A  L    K  R+ VL  ++++
Sbjct: 430 GVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLA 471


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/765 (33%), Positives = 420/765 (54%), Gaps = 36/765 (4%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F SL+ A++ F      +  +     +N+LI  ++  G G  A+ ++ E+   G  PD  
Sbjct: 191 FGSLSLAERVFSEMPYCDRVT-----FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCV 245

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L AC       +G Q+H  ++K G   D  +E  L++ Y +CG IV+   +F   
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              NVV W  ++ A  +     ++  LF +MV  G++PN  T  C++  C     + LG+
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++     + G +++  +   L+DMY K G +D A+++    + +++V   ++++ YV+  
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
             +EAL    +M L G  PD + + SA+SA A +  +  G+  H  V  +G     SI N
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWN 485

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++++Y +CG+ + A  +F+ + +K  ++WN +++G  ++G                   
Sbjct: 486 ALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSG------------------- 526

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                       ++EEA+E+F  M    +K +  T V   SA   L  +   K I+A + 
Sbjct: 527 ------------LYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVI 574

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G   + ++A AL+ ++ +CG  + A   F  M +R+  +W   I + +  G G +A++
Sbjct: 575 KTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALD 634

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF++M ++G+KP+ + F+GVL ACSH GLV +G   F+SM+  HG+ P+  HY C+VD+L
Sbjct: 635 LFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDIL 694

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L  A   ++ MPV  N ++W +LL+AC+ H+N++I   AA+ + EL+P  S  +V
Sbjct: 695 GRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYV 754

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN YA  GKW     VR  MK++G+RK PG S IEV   VH F  GD  HP  + I  
Sbjct: 755 LLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYK 814

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L +++ RL   GY+     +  + ++++K      HSEKLA+AFGL+S   +MP+RV+K
Sbjct: 815 YLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIK 874

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH++ K  S+V  REI++RD  RFH F  G+CSC DFW
Sbjct: 875 NLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 255/525 (48%), Gaps = 44/525 (8%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           LN+ KQ H ++LK G+   P YI +     + +  +       +A + +   + T+  L 
Sbjct: 260 LNKGKQLHSYLLKAGM--SPDYIIE----GSLLDLYVKCGVIVEALEIFKSGDRTNVVL- 312

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +N ++  Y  I    ++  L+ ++   G+ P++FT+P +L  CT +     G Q+H   
Sbjct: 313 -WNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLS 371

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           +K GF+ D++V   LI+ Y + G +   RR+ + +  ++VVSWTS+I    + +  KEA+
Sbjct: 372 IKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEAL 431

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             F +M   GI P+++ +   ISACA ++ +  G ++ + +   G  A+  + NALV++Y
Sbjct: 432 ETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLY 491

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            +CG    A  LF   + ++ +  N ++S + + GL  EAL +  +M   G + +  T +
Sbjct: 492 ARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFV 551

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S++SASA L D+  G+  H  V++ G      + N +I +Y KCG  E A   F  MS +
Sbjct: 552 SSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSER 611

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
             VSWN++I    ++G                   W     GL       EA++LF  M 
Sbjct: 612 NHVSWNTIITSCSQHG-------------------W-----GL-------EALDLFDQMK 640

Query: 465 SERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
            E +K + VT +GV +AC ++G ++    +  +   ++GIH        +VD+  R G  
Sbjct: 641 QEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQL 700

Query: 524 QRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
            RA +    M    +   W   + A  +  N   GE A +   E+
Sbjct: 701 DRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLEL 745



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 237/491 (48%), Gaps = 33/491 (6%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H   +  G   D    N LI+ Y + G +   RRVF+++S R+ VSW +++   AR  L
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            +EAV L+ +M   G+ P    +  V+SAC K    E G  V A + + G  +  ++ NA
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+ +Y++ G++  A+++F E    + V  NT++S + + G    AL I +EM L G  PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            VT+ S ++A A +GDL  G+  H Y+L+ G+     I  +++D+Y+KCG    A  IF 
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                 VV W                               N ML    Q +   ++ +L
Sbjct: 304 SGDRTNVVLW-------------------------------NLMLVAYGQISDLAKSFDL 332

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M++  ++ +  T   +   C Y G ++L + I+    K G   DM ++  L+DM+++
Sbjct: 333 FCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSK 392

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
            G   +A ++   +E +DV +WT+ I         ++A+E F +M   GI PD+I     
Sbjct: 393 YGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASA 452

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           ++AC+    + QG  +  S   + G S  +  +  +V+L  R G   EA  L +++    
Sbjct: 453 ISACAGIKAMRQGQQI-HSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE-HK 510

Query: 640 NDVIWGSLLAA 650
           + + W  +++ 
Sbjct: 511 DKITWNGMVSG 521


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/687 (37%), Positives = 401/687 (58%), Gaps = 24/687 (3%)

Query: 164 IVKMGFD----RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           + +M FD    RD+   N +I  Y    ++   R +F+ M ER+V SW +++   A+   
Sbjct: 108 LARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-- 277
             +A  +F  M E+    N V+   ++SA  +   LE     C      G + N  +V  
Sbjct: 168 VDDARRVFDRMPEK----NDVSWNALLSAYVQNSKLE---EACVL---FGSRENWALVSW 217

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N L+  ++K   +  A+Q F   K R++V  NTI++ Y + G   EA  + DE  +H   
Sbjct: 218 NCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVH--- 274

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            D  T  + VS   Q   +   R     +       W    N M+  Y++  + EMA  +
Sbjct: 275 -DVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSW----NAMLAGYVQGERVEMAKEL 329

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD M  + V +WN++I G  + G +  A+ +F +MP RD +SW  M+ G +Q     EA+
Sbjct: 330 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEAL 389

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF +M  E  +++R +     S C  + AL+L K ++  + K G      +  AL+ M+
Sbjct: 390 RLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 449

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            +CG  + A  +F+ M  +D+ +W   I   +  G GE+A+  F  M R+G+KPD    V
Sbjct: 450 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMV 509

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL+ACSH GLV++G   F +MT  +GV P   HY CMVDLLGRAGLL EA +L+K+MP 
Sbjct: 510 AVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPF 569

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           EP+  IWG+LL A + H N ++A  AA++I  ++PE SG++VLLSN+YAS+G+W +V ++
Sbjct: 570 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 629

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R++M+++G++K+PG S IE+  K H F+ GDE HPE + I + L +++ R++ AGYV   
Sbjct: 630 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKT 689

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
           + VL DV+E+EK+ ++ +HSE+LA+A+G++  S   PIRV+KNLR+C DCH+  K ++KV
Sbjct: 690 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKV 749

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
             R II+RDNNRFH F+ GSCSC D+W
Sbjct: 750 TGRLIILRDNNRFHHFKDGSCSCGDYW 776



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 200/452 (44%), Gaps = 80/452 (17%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR---LGLAREALAI 327
           + +++  NA++  Y++ G  + A+ LF E  +R+LV  N ++  YVR   LG ARE    
Sbjct: 87  RWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFER 146

Query: 328 LDE-------MLLHGPRP-----------DRVTMLSAVSASAQLGDLL-CGRMCHGYVLR 368
           + E        +L G              DR+   + VS +A L   +   ++    VL 
Sbjct: 147 MPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLF 206

Query: 369 NGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
              E W  +  N ++  ++K  K   A + FD M  + VVSWN++I G  +NG+++ AR+
Sbjct: 207 GSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQ 266

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +F E P  D  +W  M+ G  Q  M EEA ELF  M  ER +V    M+      GY+  
Sbjct: 267 LFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM-PERNEVSWNAML-----AGYVQG 320

Query: 488 --LDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
             +++AK ++     + + C ++     ++  +A+CG    A  +F +M KRD  +W A 
Sbjct: 321 ERVEMAKELF-----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 375

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGW 593
           I   +  G+  +A+ LF  M R+G + +   F   L+ C+           HG LV  G+
Sbjct: 376 IAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 435

Query: 594 H------------------------LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
                                    LF+ M         IV +  M+    R G   EAL
Sbjct: 436 ETGCFVGNALLLMYCKCGSIEEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEEAL 490

Query: 630 DLIKSMPVE---PNDVIWGSLLAACQKHQNVD 658
              +SM  E   P+D    ++L+AC     VD
Sbjct: 491 RFFESMKREGLKPDDATMVAVLSACSHTGLVD 522



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 165/341 (48%), Gaps = 22/341 (6%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F + +++ GY    +  EA  L      F  +P++    +  NA       GE V++  
Sbjct: 276 VFTWTAMVSGYIQNRMVEEAREL------FDRMPERNEVSW--NAMLAGYVQGERVEMAK 327

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +  +   R+V   N +I  Y +CG I + + +FD+M +R+ VSW ++I   ++     E
Sbjct: 328 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYE 387

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+ LF  M  EG + N  +    +S CA +  LELG ++   + + G +    + NAL+ 
Sbjct: 388 ALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 447

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG+++ A  LF E   +++V  NT+++ Y R G   EAL   + M   G +PD  T
Sbjct: 448 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDAT 507

Query: 343 MLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           M++ +SA +  G +  GR     M   Y +R   + +   C  M+D+  + G  E A  +
Sbjct: 508 MVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHY--AC--MVDLLGRAGLLEEAHNL 563

Query: 398 FDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMP 433
             +M        W +L+     +G+ E    +A ++F+  P
Sbjct: 564 MKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 604



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 137/283 (48%), Gaps = 20/283 (7%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  I  YM+ G+   A R+F  M   + VS+N++I+G ++NG+ E AR +F EMP RD +
Sbjct: 63  NVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLV 122

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN M+ G  +     +A ELF  M  ER   D  +   + S     G +D A+ ++  +
Sbjct: 123 SWNVMIKGYVRNRNLGKARELFERM-PER---DVCSWNTILSGYAQNGCVDDARRVFDRM 178

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            EKN +  +     AL+  + +    + A  +F   E   + +W   +G    +    +A
Sbjct: 179 PEKNDVSWN-----ALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEA 233

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
            + F+ M  +    D + +  ++T  +  G +++   LF   + +H V      +  MV 
Sbjct: 234 RQFFDSMKVR----DVVSWNTIITGYAQNGEIDEARQLFDE-SPVHDV----FTWTAMVS 284

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
              +  ++ EA +L   MP E N+V W ++LA   + + V++A
Sbjct: 285 GYIQNRMVEEARELFDRMP-ERNEVSWNAMLAGYVQGERVEMA 326



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D++     +  + R G    A++VF+RM +    ++ A I      G  E A  LF+EM 
Sbjct: 58  DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP 117

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
            + +   +++  G +   + G    +   LF  M +       +  +  ++    + G +
Sbjct: 118 ERDLVSWNVMIKGYVRNRNLG----KARELFERMPE-----RDVCSWNTILSGYAQNGCV 168

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            +A  +   MP E NDV W +LL+A  ++  ++ A
Sbjct: 169 DDARRVFDRMP-EKNDVSWNALLSAYVQNSKLEEA 202


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/739 (35%), Positives = 411/739 (55%), Gaps = 31/739 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +LI+GY       E + L+  +   G   + F F  +L              +H  I 
Sbjct: 9   FVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIY 68

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G + + FV   LI+ Y  CG +   R+ FD ++ +++VSWT ++   A  D  ++++ 
Sbjct: 69  KLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQ 128

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF EM   G  PN  T   V+ AC  L+   +G  V   + +   + +  +   L+D+Y 
Sbjct: 129 LFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYT 188

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G  +   ++F E    +++  + ++S Y +   +REA+ +  +M      P++ T  S
Sbjct: 189 KFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFAS 248

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + + A + +L  G+  H +VL+ GL+G   + N ++D+Y KCG+               
Sbjct: 249 VLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGR--------------- 293

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                           ++++ ++F E+P R+ ++WNTM+ G  Q    ++A+ L++ ML 
Sbjct: 294 ----------------LDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLE 337

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
            +++   VT   V  AC  L A++L   I++   K     D+ +  AL+DM+A+CG  + 
Sbjct: 338 CQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKN 397

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A  VF  + +RD  +W A I   +M G   +A++ F  M      P+ + FV +L+ACS+
Sbjct: 398 ARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSN 457

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GL++ G + F+SM   +G+ P + HY CMV LLGR+G L +A+ LI+ +P+EPN  +W 
Sbjct: 458 AGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWR 517

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC  H +VD+   +A++I ++DP+    HVLLSNIYA   +W +VA VR  MK +G
Sbjct: 518 ALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKG 577

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K PG S IE  G VH F+ GD SHP+M  IS ML  +N +   AGYVPDL  VL DV+
Sbjct: 578 VKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVE 637

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           + EKK  L  HSE+LA+AFGLI T     IR++KNLR+C DCHS  KL+SK+  R+II+R
Sbjct: 638 DDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIR 697

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH F+ G CSC D+W
Sbjct: 698 DMNRFHHFQDGICSCGDYW 716



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 192/397 (48%), Gaps = 18/397 (4%)

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF-DYYIKDNETSATLFMYNSL---- 109
           +LK  +G +   + K V  C     +E   Y      D Y K  + +  L ++  +    
Sbjct: 148 VLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHD 207

Query: 110 -------IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
                  I  Y+      EA+ L+ ++    +LP++FTF  VL +C        G QVH 
Sbjct: 208 VIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHC 267

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            ++K+G D +VFV N L++ Y +CG + +  ++F E+  RN V+W ++I    +     +
Sbjct: 268 HVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDK 327

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+ L+  M+E  ++ + VT   V+ ACA L  +ELG ++ +   +     + ++ NAL+D
Sbjct: 328 ALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALID 387

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG++  A+ +F    +R+ +  N ++S Y   GL  EAL     M      P+++T
Sbjct: 388 MYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLT 447

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
            +S +SA +  G L  G+     ++++ G+E        M+ +  + G  + A ++ + +
Sbjct: 448 FVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEI 507

Query: 402 S-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMP 433
                V  W +L+   + + DV+    SA+++    P
Sbjct: 508 PLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDP 544



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 12/288 (4%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVC 72
            V       +A   P        L++C ++  L   KQ HCH+LK GL       + ++ 
Sbjct: 227 AVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMD 286

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
             A+ G  ++   + K F      NE +     +N++I GY   G G +A+SLY  +   
Sbjct: 287 VYAKCGRLDN---SMKLFMELPNRNEVT-----WNTMIVGYVQSGDGDKALSLYKNMLEC 338

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
            +   + T+  VL AC   +A   G Q+H   +K  +D+DV V N LI+ Y +CG I + 
Sbjct: 339 QVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA 398

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R VFD +SER+ +SW ++I   +   L  EA+  F  M E    PN +T V ++SAC+  
Sbjct: 399 RLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNA 458

Query: 253 QNLELG-DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
             L++G +   + + + G++        +V +  + G +D A +L  E
Sbjct: 459 GLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEE 506


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/775 (34%), Positives = 427/775 (55%), Gaps = 48/775 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCI-----GLGVEAISLYVELAGFGILP 136
           SL+ A++ FD           L  +N+++  Y+       G   E + L+  L       
Sbjct: 127 SLSSARQVFD-----TTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGST 181

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
            + T   VL  C  S        VHG  +K+G + DVFV   L+N Y +CG + D R +F
Sbjct: 182 TRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLF 241

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC--AKLQN 254
           D M ER+VV W  ++    +  L KEA  LF E    G++P+  ++  +++ C  A   +
Sbjct: 242 DWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDD 301

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           LELG +V     + G+ ++  + N+LV+MY K G    A+++F + K  +L+  N+++S+
Sbjct: 302 LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS 361

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ-----LGDLLCGRMCHGYVLRN 369
             +  L  E++ +  ++L  G +PD  T+ S   A+A      L  L  G+  H + ++ 
Sbjct: 362 CAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKA 421

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G +    + + ++DMY+KCG                               D+ +A  VF
Sbjct: 422 GFDSDLHVNSGILDMYIKCG-------------------------------DMVNAGIVF 450

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
           + +   D ++W +M+ G       ++A+ ++  M   R+  D  T   +  A   + AL+
Sbjct: 451 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 510

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
             + ++A + K     D  + T+LVDM+A+CG+ + A ++F++M  R+++ W A +  +A
Sbjct: 511 QGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLA 570

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
             GN E+AV LF  M   GI+PD + F+G+L+ACSH GL ++ +    SM + +G+ P+I
Sbjct: 571 QHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEI 630

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HY C+VD LGRAGL+ EA  +I++MP + +  I  +LL AC+   +V+     A R+  
Sbjct: 631 EHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFA 690

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           L+P  S  +VLLSNIYA+A +W +V   R  MK + ++K PG S I+V   +H F   D 
Sbjct: 691 LEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDR 750

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SHP+ + I   + EM   +R+ GYVPD   VLLDV+++EK+  L +HSEKLA+A+GLIST
Sbjct: 751 SHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLIST 810

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             +  IRV+KNLR+C DCH+  K +SKV++REI++RD NRFH FR G CSC D+W
Sbjct: 811 PASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 247/516 (47%), Gaps = 45/516 (8%)

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA- 215
           G   H  IV  G   D F+ N L+  Y +CG +   R+VFD   ER++V+W +++ A A 
Sbjct: 96  GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155

Query: 216 ----RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
                    +E ++LF  +         +T+  V+  C     L   + V  Y  ++G++
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 215

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            +  +  ALV++Y KCG +  A+ LF   ++R++VL N ++  YV+LGL +EA  +  E 
Sbjct: 216 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 275

Query: 332 LLHGPRPDRVTMLSAVSASAQLG--DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
              G RPD  ++   ++     G  DL  G+  HG  +++GL+   S+ N++++MY K G
Sbjct: 276 HRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 335

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
               A  +F+ M +  ++SWNS+I+                                  Q
Sbjct: 336 CAYFAREVFNDMKHLDLISWNSMIS-------------------------------SCAQ 364

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGV-----ASACGYLGALDLAKWIYAYIEKNGIH 504
            ++ EE++ LF  +L E +K D  T+  +     A ACG L  LD  K I+A+  K G  
Sbjct: 365 SSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 424

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            D+ + + ++DM+ +CGD   A  VF  +   D  AWT+ I      GN +QA+ +++ M
Sbjct: 425 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 484

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
            +  + PD   F  ++ A S    + QG  L  ++  +  VS   V    +VD+  + G 
Sbjct: 485 RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTS-LVDMYAKCGN 543

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           + +A  L K M V  N  +W ++L    +H N + A
Sbjct: 544 IEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEA 578



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 195/430 (45%), Gaps = 47/430 (10%)

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            NL LG    A I   G   +  + N L+ MY KCG++ +A+Q+F    +R+LV  N I+
Sbjct: 91  HNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAIL 150

Query: 313 SNYV-----RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
             Y        G A+E L +   +        R+T+   +      G L      HGY +
Sbjct: 151 GAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 210

Query: 368 RNGLEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           + GLE WD  +   ++++Y KCG+   A  +FD M  + VV WN ++ G ++ G      
Sbjct: 211 KIGLE-WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG------ 263

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
                                    + +EA +LF       ++ D  ++  + + C + G
Sbjct: 264 -------------------------LEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAG 298

Query: 487 A--LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
              L+L K ++    K+G+  D+ +A +LV+M+++ G    A +VF  M+  D+ +W + 
Sbjct: 299 TDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSM 358

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPD-----SIVFVGVLTACSHGGLVNQGWHLFRSM 599
           I + A     E++V LF ++L +G+KPD     SI       AC    L++QG  +    
Sbjct: 359 ISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHA 418

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
                 S   V+ G ++D+  + G +  A  ++ +    P+DV W S+++ C  + N D 
Sbjct: 419 IKAGFDSDLHVNSG-ILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQ 476

Query: 660 AAYAAERITE 669
           A     R+ +
Sbjct: 477 ALRIYHRMRQ 486


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/662 (37%), Positives = 389/662 (58%), Gaps = 4/662 (0%)

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           GD    +++FD + + +  + ++LI A   R LP EA+ L+  +   GIKP++   + V 
Sbjct: 80  GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            AC    +      V       GM ++A + NAL+  Y KC  V+ A+++F +   +++V
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
              ++ S YV  GL R  LA+  EM  +G +P+ VT+ S + A ++L DL  GR  HG+ 
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           +R+G+     +C+ ++ +Y +C   + A  +FD M ++ VVSWN ++     N + +   
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319

Query: 427 EVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
            +FS+M  +    D  +WN ++GG  +    E+A+E+ R M +   K +++T+     AC
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPAC 379

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             L +L + K ++ Y+ ++ +  D+   TALV M+A+CGD   +  VF  + ++DV AW 
Sbjct: 380 SILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWN 439

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
             I A AM GNG + + LF  ML+ GIKP+S+ F GVL+ CSH  LV +G  +F SM   
Sbjct: 440 TMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRD 499

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           H V P   HY CMVD+  RAG L EA + I+ MP+EP    WG+LL AC+ ++NV++A  
Sbjct: 500 HLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKI 559

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           +A ++ E++P   G +V L NI  +A  W+  +  R+ MKE+GI K PG S ++V  +VH
Sbjct: 560 SANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVH 619

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F  GD+++ E + I + L E+  +++ AGY PD   VL D+D++EK   L  HSEKLA+
Sbjct: 620 TFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAV 679

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFG+++ +    IRV KNLR+C DCH+  K VSKV    IIVRD+ RFH FR G+CSC D
Sbjct: 680 AFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQD 739

Query: 843 FW 844
            W
Sbjct: 740 LW 741



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 241/525 (45%), Gaps = 75/525 (14%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           AQ+ FD   + + T+ +     +LI  ++  GL  EAI LY  L   GI P    F  V 
Sbjct: 85  AQQLFDNIPQPDPTTCS-----TLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC  S       +VH   ++ G   D F+ N LI+ YG+C  +   RRVFD++  ++VV
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SWTS+        LP+  + +F EM   G+KPNSVT+  ++ AC++L++L+ G  +  + 
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY---------- 315
              GM  N  + +ALV +Y +C +V  A+ +F     R++V  N +++ Y          
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319

Query: 316 -------------------------VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
                                    +  G   +A+ +L +M   G +P+++T+ S + A 
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPAC 379

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           + L  L  G+  H YV R+ L G  +    ++ MY KCG   ++  +FD +  K VV+WN
Sbjct: 380 SILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWN 439

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++I     +G+            GR                   E + LF  ML   IK 
Sbjct: 440 TMIIANAMHGN------------GR-------------------EVLLLFESMLQSGIKP 468

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQV 529
           + VT  GV S C +   ++    I+  + ++  +  D      +VD+F+R G    A + 
Sbjct: 469 NSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEF 528

Query: 530 FRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            +RM  +   SAW A +GA  +  N E A    N++    I+P++
Sbjct: 529 IQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFE--IEPNN 571



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 138/329 (41%), Gaps = 32/329 (9%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+   +  G    A+QLF      +   C+T++S +   GL  EA+ +   +   G +P 
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
               L+   A    GD    +  H   +R G+     + N +I  Y KC   E A R+FD
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            +  K VVSW S+ +  +  G       VF EM       WN                  
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEM------GWNG----------------- 228

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
                   +K + VT+  +  AC  L  L   + I+ +  ++G+  ++ + +ALV ++AR
Sbjct: 229 --------VKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYAR 280

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           C   ++A  VF  M  RDV +W   + A       ++ + LF++M  +G++ D   +  V
Sbjct: 281 CLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAV 340

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
           +  C   G   +   + R M ++ G  P 
Sbjct: 341 IGGCMENGQTEKAVEMLRKMQNL-GFKPN 368



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 2/247 (0%)

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           L+   +  GD   A+++F  +P  D  + +T++   T   +  EA+ L+  + +  IK  
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
               + VA ACG  G     K ++    + G+  D  L  AL+  + +C   + A +VF 
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            +  +DV +WT+        G     + +F EM   G+KP+S+    +L ACS    +  
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKS 251

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
           G          HG+   +     +V L  R   + +A  +   MP   + V W  +L A 
Sbjct: 252 G-RAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMP-HRDVVSWNGVLTAY 309

Query: 652 QKHQNVD 658
             ++  D
Sbjct: 310 FTNREYD 316



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
           H  ++L  A +++    GD +RA Q+F  + + D +  +  I A    G   +A+ L+  
Sbjct: 67  HLGLRLLKAALNV----GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYAS 122

Query: 564 MLRQGIKPDSIVFVGVLTACSHGG 587
           +  +GIKP + VF+ V  AC   G
Sbjct: 123 LRARGIKPHNSVFLTVAKACGASG 146


>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Glycine max]
          Length = 616

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/558 (42%), Positives = 354/558 (63%), Gaps = 3/558 (0%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL---HGPRPDRVTMLSA 346
           +D A +L     +  L   N+++  Y +     ++      +L    +   PD  T    
Sbjct: 59  LDYANKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFL 118

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           V   AQL   + G   HG V+++G E    +   ++ MY + G       +FD      +
Sbjct: 119 VRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDL 178

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+  +++    K GD++ AR++F EMP RDH++WN M+ G  Q     EA+++F +M  E
Sbjct: 179 VTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQME 238

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            +K++ V+MV V SAC +L  LD  +W++AY+E+  +   + L TALVDM+A+CG+  RA
Sbjct: 239 GVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRA 298

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
           MQVF  M++R+V  W++AIG +AM G GE++++LFN+M R+G++P+ I F+ VL  CS  
Sbjct: 299 MQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVV 358

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GLV +G   F SM +++G+ PQ+ HYG MVD+ GRAG L EAL+ I SMP+ P+   W +
Sbjct: 359 GLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSA 418

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+ ++N ++   A  +I EL+ +  G +VLLSNIYA    W +V+ +R  MK +G+
Sbjct: 419 LLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGV 478

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
           +KLPG S IEV+G+VHEF  GD+SHP  + I   L E++  LR +GYV +   VL D++E
Sbjct: 479 KKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEE 538

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EK+  LS HSEK+A+AFGLIS    +PIRVV NLR+C DCH+ AK++SK+++REIIVRD
Sbjct: 539 EEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRD 598

Query: 827 NNRFHFFRQGSCSCSDFW 844
            NRFH F+ G CSC D+W
Sbjct: 599 RNRFHHFKDGECSCKDYW 616



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 207/417 (49%), Gaps = 44/417 (10%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P+I  L +C TL E+KQ H  ++ +G+ + P +  + V T A   T  +L YA K  ++ 
Sbjct: 11  PTISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNT-TNLDYANKLLNH- 68

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL---AGFGILPDKFTFPFVLNACTK 150
                 + TLF  NS+IR YS      ++   Y  +       + PD +TF F++  C +
Sbjct: 69  ----NNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQ 124

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE------------------------- 185
             A   G+ VHGA++K GF+ D  V+  L+  Y E                         
Sbjct: 125 LQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAM 184

Query: 186 ------CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
                 CGDI   R++FDEM ER+ V+W ++I   A+    +EA+ +F  M  EG+K N 
Sbjct: 185 LNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNE 244

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           V+MV V+SAC  LQ L+ G  V AY++   ++    +  ALVDMY KCG VD A Q+F  
Sbjct: 245 VSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWG 304

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
            K+RN+   ++ +      G   E+L + ++M   G +P+ +T +S +   + +G +  G
Sbjct: 305 MKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEG 364

Query: 360 RMCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV-SWNSLI 413
           R  H   +RN  G+         M+DMY + G+ + A    + M  +  V +W++L+
Sbjct: 365 RK-HFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALL 420



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/450 (22%), Positives = 186/450 (41%), Gaps = 72/450 (16%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG--ECGDIVDGRRVFDEMSE 201
           +LN+CT      E  Q+H  +V  G   +       +         ++    ++ +  + 
Sbjct: 15  LLNSCT---TLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNN 71

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVE---EGIKPNSVTMVCVISACAKLQNLELG 258
             + +  S+I A ++   P ++ + +  ++      + P++ T   ++  CA+LQ    G
Sbjct: 72  PTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTG 131

Query: 259 DRVCAYIDELGMKANALMVNALVDMYM-------------------------------KC 287
             V   + + G + +  +   LV MY                                KC
Sbjct: 132 LCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKC 191

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +D A+++F E  +R+ V  N +++ Y + G +REAL +   M + G + + V+M+  +
Sbjct: 192 GDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVL 251

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           SA   L  L  GR  H YV R  +    ++   ++DMY KCG  + A ++F  M  + V 
Sbjct: 252 SACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVY 311

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           +W+S I GL  NG                                 EE+++LF  M  E 
Sbjct: 312 TWSSAIGGLAMNG-------------------------------FGEESLDLFNDMKREG 340

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRA 526
           ++ + +T + V   C  +G ++  +  +  +    GI   ++    +VDM+ R G  + A
Sbjct: 341 VQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEA 400

Query: 527 MQVFRRMEKR-DVSAWTAAIGAMAMEGNGE 555
           +     M  R  V AW+A + A  M  N E
Sbjct: 401 LNFINSMPMRPHVGAWSALLHACRMYKNKE 430


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/696 (37%), Positives = 403/696 (57%), Gaps = 40/696 (5%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N  I  Y   G I   RRVFDEM ++ +VSW S++    + + P+EA YLF +M E    
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER--- 76

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            N+V+   +IS   K + +    +    + E     N +   A+V  Y++ G V  A+ L
Sbjct: 77  -NTVSWNGLISGYVKNRMVSEARKAFDTMPE----RNVVSWTAMVRGYVQEGLVSEAETL 131

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F +  ++N+V    ++   +++    EA  + D M    P  D V   + +S   Q G L
Sbjct: 132 FWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIM----PVKDVVARTNMISGYCQEGRL 187

Query: 357 LCGRMCHGYVLRNGLEGWDS-----ICNTMIDM----------------------YMKCG 389
              R     + R  +  W +     + N  +D+                      Y + G
Sbjct: 188 AEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGG 247

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           + E A  +FD M  K VV+ N++I G  +NG+V  AR+VF ++  +D  +W+ M+    +
Sbjct: 248 RIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYER 307

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
           +    EA+ LF +M  E ++ +  +++ V S C  L +LD  + ++A + K+    D+ +
Sbjct: 308 KGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFV 367

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
           A+ L+ M+ +CGD  +A Q+F R   +D+  W + I   A  G  E+A+++F+EM   G+
Sbjct: 368 ASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGM 427

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
             D + FVGVL+ACS+ G V +G  +F SM   + V P+  HY CMVDLLGRAGL+ +A+
Sbjct: 428 ATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAM 487

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           DLI+ MPVE + +IWG+LL AC+ H N+++A  AA+++ +L+P+ +G ++LLSNIYAS G
Sbjct: 488 DLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKG 547

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG-DESHPEMNNISSMLREMNCRL 748
           +W +VA +R  M+ + + K PG S IEV  +VH FT G    HPE+++I  ML +++  L
Sbjct: 548 RWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGML 607

Query: 749 RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
           R+AGY PD + VL DVDE+EK   L HHSE+LA+AFGL+   + MPIRV+KNLR+C DCH
Sbjct: 608 REAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCH 667

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S  KL++K+  REII+RD NRFH F+ G CSC D+W
Sbjct: 668 SAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 18/238 (7%)

Query: 69  KVVCTCAQM----GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           K V  C  M    G    +  A++ FD   + ++ +     ++++I+ Y   G  VEA++
Sbjct: 262 KAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT-----WSAMIKVYERKGFEVEALN 316

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L+  +   G+  +  +   VL+ C   ++   G QVH  +VK  FD DVFV + LI  Y 
Sbjct: 317 LFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYV 376

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CGD+V  R++FD  S +++V W S+I   A+  L +EA+ +F EM   G+  + VT V 
Sbjct: 377 KCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVG 436

Query: 245 VISACAKLQNLELGDRV-----CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           V+SAC+    ++ G  +       Y+ E   +  A M    VD+  + G V+ A  L 
Sbjct: 437 VLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACM----VDLLGRAGLVNDAMDLI 490



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 56/285 (19%)

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           M CR +        +++NS IA   + G +ESAR VF EMP +  +SWN+M+ G  Q N 
Sbjct: 6   MPCRRY---CTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNR 62

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
             EA  LF  M  ER   + V+  G+ S  GY+              KN +  +      
Sbjct: 63  PREARYLFDKM-PER---NTVSWNGLIS--GYV--------------KNRMVSE------ 96

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
                        A + F  M +R+V +WTA +     EG   +A  LF +M  + +   
Sbjct: 97  -------------ARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSW 143

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
           +++  G++        +++   LF    DI  V   +V    M+    + G L EA +L 
Sbjct: 144 TVMLGGLIQVRR----IDEARGLF----DIMPVK-DVVARTNMISGYCQEGRLAEARELF 194

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
             MP   N + W ++++   ++  VD+    A ++ E+ PEK+ V
Sbjct: 195 DEMP-RRNVISWTTMISGYVQNGQVDV----ARKLFEVMPEKNEV 234


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/739 (34%), Positives = 410/739 (55%), Gaps = 31/739 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+LI G++  G G  A+ ++ E+   G+ PD  T   +L AC+      +G Q+H  ++
Sbjct: 212 FNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLL 271

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K G   D  +E  L++ Y + GDI +  ++FD     NVV W  ++ A  + D   ++  
Sbjct: 272 KAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFD 331

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F+ M+  G++PN  T  C++  C     + LG+++ +   + G +++  +   L+DMY 
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYS 391

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G +D A+++    +++++V   ++++ YV+    +EAL    EM   G  PD + + S
Sbjct: 392 KYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLAS 451

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
           A+SA A +  +  G   H  V  +G     SI N ++ +Y +CG  + A   F+ + +K 
Sbjct: 452 AISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHK- 510

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                                         + I+WN ++ G  Q  ++EEA+++F  M  
Sbjct: 511 ------------------------------EGITWNGLISGFAQSGLYEEALKVFMKMDQ 540

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
              K +  T V   SA   L  +   K I+A + K G   + +++ AL+ ++ +CG  + 
Sbjct: 541 AGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIED 600

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A   F  M KR+  +W   I   +  G G +A++LF++M +QG+KP  + FVGVLTACSH
Sbjct: 601 AKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSH 660

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV +G   F+SM++ HG+ P+  HY C+VD+LGRAG L  A   ++ MP+  + ++W 
Sbjct: 661 VGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWR 720

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL+AC+ H+N++I  +AA+ + EL+P  S  +VLLSN YA  GKW +  ++R  MK++G
Sbjct: 721 TLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRG 780

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           +RK PG S IEV   VH F  GD  HP  + I + L  +N RL   GY  +  ++  + +
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKE 840

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           ++ K      HSEKLA+AFGL+S    MP+RV+KNLR+C DCH++ K  S V  REI++R
Sbjct: 841 KEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLR 900

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D  RFH F  GSCSC D+W
Sbjct: 901 DVYRFHHFNNGSCSCGDYW 919



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 276/580 (47%), Gaps = 50/580 (8%)

Query: 85  YAQKAF---------DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL 135
           YA+K F         +  ++DN +      + +++ GY+  GLG EA+ LY E+   G++
Sbjct: 87  YAKKGFVRRARRVFEELSVRDNVS------WVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P  +    +L+ACTK+  F  G  +H  + K GF  + FV N LI+ Y  C       RV
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           F +M   + V++ +LI   A+      A+ +F EM   G+ P+SVT+  +++AC+ + +L
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
             G ++ +Y+ + GM  + +M  +L+D+Y+K G ++ A Q+F      N+VL N ++  Y
Sbjct: 261 RKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAY 320

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            ++    ++  I   ML  G RP++ T    +      G++  G   H   ++NG +   
Sbjct: 321 GQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDM 380

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +   +IDMY K G  + A RI D +  K VV                            
Sbjct: 381 YVSGVLIDMYSKYGWLDKAQRILDMIEEKDVV---------------------------- 412

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
              SW +M+ G  Q    +EA+E F+ M +  I  D + +    SAC  + A+     I+
Sbjct: 413 ---SWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIH 469

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           A +  +G   D+ +   LV ++ARCG  + A   F  +E ++   W   I   A  G  E
Sbjct: 470 ARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYE 529

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+++F +M + G K +   FV  ++A ++   + QG  +   +    G + +      +
Sbjct: 530 EALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNAL 588

Query: 616 VDLLGRAGLLGEA-LDLIKSMPVEPNDVIWGSLLAACQKH 654
           + L G+ G + +A +D  +    + N+V W +++  C +H
Sbjct: 589 ISLYGKCGSIEDAKMDFFEM--TKRNEVSWNTIITCCSQH 626



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 261/549 (47%), Gaps = 35/549 (6%)

Query: 141 FPFVLNACTKSSAFGEGV-QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           F   L AC  S      V ++H   +  G      + N LI+ Y + G +   RRVF+E+
Sbjct: 44  FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL 103

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           S R+ VSW +++   A+  L +EAV L+ EM   G+ P    +  ++SAC K +  +LG 
Sbjct: 104 SVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGR 163

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            +   + + G  +   + NAL+ +Y++C +   A ++F +    + V  NT++S + + G
Sbjct: 164 LIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCG 223

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
               AL I DEM L G  PD VT+ S ++A + +GDL  G+  H Y+L+ G+     +  
Sbjct: 224 HGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEG 283

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +++D+Y+K G  E A +IFD      VV W                              
Sbjct: 284 SLLDLYVKSGDIEEALQIFDSGDRTNVVLW------------------------------ 313

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
            N ML    Q +   ++ ++F  ML+  ++ ++ T   +   C + G + L + I++   
Sbjct: 314 -NLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTI 372

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           KNG   DM ++  L+DM+++ G   +A ++   +E++DV +WT+ I         ++A+E
Sbjct: 373 KNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALE 432

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            F EM   GI PD+I     ++AC+    V+QG  +  +   + G S  +  +  +V L 
Sbjct: 433 TFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQI-HARVYVSGYSADVSIWNGLVYLY 491

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            R G+  EA    +++      + W  L++   +    + A     ++ +    K  V  
Sbjct: 492 ARCGISKEAFSSFEAIE-HKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGA-KYNVFT 549

Query: 680 LLSNIYASA 688
            +S+I ASA
Sbjct: 550 FVSSISASA 558



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 249/530 (46%), Gaps = 45/530 (8%)

Query: 32  DSPSIGSL-KNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           DS +I SL   C  + +L   KQ H ++LK G+         ++    + G  E    A 
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEE---AL 299

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
           + FD   + N     + ++N ++  Y  I    ++  ++  +   G+ P+KFT+P +L  
Sbjct: 300 QIFDSGDRTN-----VVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRT 354

Query: 148 CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
           CT +   G G Q+H   +K GF  D++V   LI+ Y + G +   +R+ D + E++VVSW
Sbjct: 355 CTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSW 414

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
           TS+I    + +  KEA+  F EM   GI P+++ +   ISACA ++ +  G ++ A +  
Sbjct: 415 TSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYV 474

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
            G  A+  + N LV +Y +CG    A   F   + +  +  N ++S + + GL  EAL +
Sbjct: 475 SGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKV 534

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             +M   G + +  T +S++SASA L D+  G+  H  V++ G      I N +I +Y K
Sbjct: 535 FMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGK 594

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  E A   F  M+ +  VSWN++I    ++G                         GL
Sbjct: 595 CGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGR------------------------GL 630

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCD 506
                  EA++LF  M  + +K   VT VGV +AC ++G ++    +  +   ++GIH  
Sbjct: 631 -------EALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPR 683

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
                 +VD+  R G   RA +    M    D   W   + A  +  N E
Sbjct: 684 PDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLE 733



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 210/461 (45%), Gaps = 40/461 (8%)

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQNLEL 257
           M+ R   S+   +      D P++ + LF     + +   +V   C + AC    +   L
Sbjct: 1   MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
              + A     G+    ++ N L+D+Y K G V  A+++F E   R+ V    ++S Y +
Sbjct: 61  VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
            GL  EA+ +  EM   G  P    + S +SA  +      GR+ H  V + G      +
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFV 180

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N +I +Y++C    +A R+F  M     V++N+LI+G  + G  + A  +F EM     
Sbjct: 181 GNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEM----- 235

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                 L GL+                      D VT+  + +AC  +G L   K +++Y
Sbjct: 236 -----QLSGLSP---------------------DSVTIASLLAACSAVGDLRKGKQLHSY 269

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           + K G+  D  +  +L+D++ + GD + A+Q+F   ++ +V  W   + A     +  ++
Sbjct: 270 LLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKS 329

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
            ++F  ML  G++P+   +  +L  C+H G +  G  +  S+T  +G    +   G ++D
Sbjct: 330 FDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQI-HSLTIKNGFQSDMYVSGVLID 388

Query: 618 LLGRAGLLGEA---LDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           +  + G L +A   LD+I+    E + V W S++A   +H+
Sbjct: 389 MYSKYGWLDKAQRILDMIE----EKDVVSWTSMIAGYVQHE 425


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/776 (35%), Positives = 440/776 (56%), Gaps = 45/776 (5%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV--EAISLYVEL--A 130
           A  G F  +  A K FD   + N  S     +NS++  Y+C+  GV  E+  L+  L   
Sbjct: 239 AMYGKFGFVESAVKVFDKMPQRNLVS-----WNSVM--YACLENGVFEESYGLFKGLLNG 291

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
             G++PD  T   V+  C +      G+  HG  +K+G   ++ V + L++ Y +CG + 
Sbjct: 292 DEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLC 351

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISAC 249
           + R +FD  +E+NV+SW S+I   ++    + A  L  +M +E+ +K N VT++ V+  C
Sbjct: 352 EARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410

Query: 250 AK-LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
            + +Q L+L +     +    ++++ L+ NA V  Y KCG++  A+ +F   + + +   
Sbjct: 411 EEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSW 470

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N ++  +V+ G  R+AL +   M   G  PD  T+ S +SA A+L  L CG+  HG +LR
Sbjct: 471 NALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLR 530

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           NG E  + IC +++ +Y++CGK  +A   FD+                            
Sbjct: 531 NGFELDEFICISLVSLYVQCGKILLAKLFFDN---------------------------- 562

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
              M  ++ + WNTM+ G +Q     +A+++F  MLS +I  D ++++G   AC  + AL
Sbjct: 563 ---MEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSAL 619

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
            L K ++ +  K+ +     +  +L+DM+A+CG  +++  +F R+  +    W   I   
Sbjct: 620 RLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGY 679

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
            + G+G +A+ELF  M   G +PDS+ F+ +LTAC+H GLV +G      M  + G+ P+
Sbjct: 680 GIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPK 739

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
           + HY C+VD+LGRAG L EAL+L+  +P +P+  IW SLL++C+ ++++DI    A ++ 
Sbjct: 740 LEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLL 799

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           EL P+K+  +VL+SN YA  GKW  V ++R +MKE G++K  G S IE+ GKV  F  GD
Sbjct: 800 ELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGD 859

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           ES  +   I     E+  ++   GY PD + VL +++E EK  +L +HSEKLA++FGL++
Sbjct: 860 ESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLN 919

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           T+K   +RV KNLR+C DCH+  KLVSK+  REIIVRDN RFH F+ G CSC D+W
Sbjct: 920 TAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 170/589 (28%), Positives = 277/589 (47%), Gaps = 70/589 (11%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQV 160
            LF++N+L+ GY    L  +A+ ++VE+      +PD FT P V+ AC        G  V
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           HG  +K     DVFV N LI  YG+ G +    +VFD+M +RN+VSW S++ AC    + 
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278

Query: 221 KEAVYLFFEMV--EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           +E+  LF  ++  +EG+ P+  TMV VI  CA+   + LG        +LG+     + +
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-R 337
           +L+DMY KCG +  A+ LF +  ++N++  N+++  Y +    R A  +L +M +    +
Sbjct: 339 SLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS-ICNTMIDMYMKCGKQEMACR 396
            + VT+L+ +    +    L  +  HGY LR+G    D  + N  +  Y KCG    A  
Sbjct: 398 VNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEG 457

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F  M +K V SWN+LI G ++NG            P                     +A
Sbjct: 458 VFCGMESKMVSSWNALIGGHVQNG-----------FP--------------------RKA 486

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           ++L+ +M    ++ D  T+  + SAC  L +L   K I+  + +NG   D  +  +LV +
Sbjct: 487 LDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSL 546

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CG    A   F  ME++++  W   I   +       A+++F++ML   I PD I  
Sbjct: 547 YVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISI 606

Query: 577 VGVLTACSHGGLVNQG--WHLF---RSMTDIHGVSPQIVHY----GCM---VDLLGRAGL 624
           +G L ACS    +  G   H F     +T+   V+  ++      GCM    ++  R  L
Sbjct: 607 IGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHL 666

Query: 625 LGE------------------ALDLIKSMP---VEPNDVIWGSLLAACQ 652
            GE                  A++L KSM      P+ V + +LL AC 
Sbjct: 667 KGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACN 715



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 222/470 (47%), Gaps = 49/470 (10%)

Query: 143 FVLNACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
            +L  C +      G ++H  I     F  DV +   L+  Y  C    D   VF+    
Sbjct: 98  LLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRR 157

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDR 260
           +N+  W +L+    R  L ++AV++F EM+      P++ T+ CVI AC  + ++ LG+ 
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V  +  +  + ++  + NAL+ MY K G V++A ++F +   RNLV  N++M   +  G+
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277

Query: 321 AREALAILDEMLL--HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
             E+  +   +L    G  PD  TM++ +   A+ G++  G + HG  L+ GL G   + 
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           ++++DMY KCG    A  +FD  + K V+SWNS+I G  K+ D                 
Sbjct: 338 SSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRD----------------- 379

Query: 439 SWNTMLGGLTQENMFEEAMELFRVM-LSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                         F  A EL R M + +++KV+ VT++ V   C         K I+ Y
Sbjct: 380 --------------FRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGY 425

Query: 498 IEKNG-IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
             ++G I  D  +A A V  +A+CG    A  VF  ME + VS+W A IG     G   +
Sbjct: 426 ALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRK 485

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWHL 595
           A++L+  M   G++PD      +L+AC+           HG ++  G+ L
Sbjct: 486 ALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFEL 535



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 202/393 (51%), Gaps = 19/393 (4%)

Query: 47  ELKQPHCHILKQGLGHKPSYISKV-VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           +LK+ H + L+ G       ++   V   A+ G   SL YA+  F         S  +  
Sbjct: 418 KLKEIHGYALRHGFIQSDELVANAFVAGYAKCG---SLHYAEGVFC-----GMESKMVSS 469

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+LI G+   G   +A+ LY+ + G G+ PD FT   +L+AC +  +   G ++HG+++
Sbjct: 470 WNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSML 529

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + GF+ D F+   L++ Y +CG I+  +  FD M E+N+V W ++I   ++ + P +A+ 
Sbjct: 530 RNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALD 589

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F +M+   I P+ ++++  + AC+++  L LG  +  +  +  +  ++ +  +L+DMY 
Sbjct: 590 MFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYA 649

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG ++ ++ +F     +  V  N +++ Y   G  R+A+ +   M   G RPD VT ++
Sbjct: 650 KCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIA 709

Query: 346 AVSASAQLGDL-----LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            ++A    G +       G+M   + ++  LE +  +    +DM  + G+   A  + + 
Sbjct: 710 LLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACV----VDMLGRAGRLNEALELVNE 765

Query: 401 MSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
           + +K     W+SL++      D++   +V +++
Sbjct: 766 LPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKL 798


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/772 (34%), Positives = 423/772 (54%), Gaps = 44/772 (5%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           +N+++ GY   G  + A+ ++V +   G  LP+ FTF  V+ +C         +Q+ G +
Sbjct: 126 WNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLL 185

Query: 165 VKMGFDRDVFVENCLINFYGECGDI------------------------------VD-GR 193
            K     D  V+  L++    CG +                              VD   
Sbjct: 186 SKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHAL 245

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            +F  M ER+VVSW  +I A ++    +EA+ +  +M  +G++P+S T    ++ACA+L 
Sbjct: 246 EIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLS 305

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +LE G ++   +       +  + +A+V++Y KCG    AK++F   +DRN V    ++ 
Sbjct: 306 SLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIG 365

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            +++ G   E++ + ++M       D+  + + +S      D+  G   H   L++G   
Sbjct: 366 GFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTR 425

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + N++I MY KCG  + A  IF+ M+ + +VSW  +I    + G++  ARE F +M 
Sbjct: 426 AVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMS 485

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVASACGYLGALDLAK 492
            R+ I+WN MLG   Q    E+ ++++  ML+E+ +  D VT V +   C  +GA  L  
Sbjct: 486 TRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGD 545

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I  +  K G+  D  +  A++ M+++CG    A + F  + ++D+ +W A I   +  G
Sbjct: 546 QIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHG 605

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G+QA+E+F+++L +G KPD I +V VL+ CSH GLV +G   F  M   H +SP + H+
Sbjct: 606 MGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHF 665

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CMVDLLGRAG L EA +LI  MP++P   +WG+LL+AC+ H N D+A  AA+ + +LD 
Sbjct: 666 SCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDS 725

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
             SG ++LL+ +YA AGK  + A+VR  M+++GI+K PG S +EVN +VH F + D SHP
Sbjct: 726 PGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHP 785

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           ++  I   L E+  ++   GYV             E      HHSEKLA+AFG++S    
Sbjct: 786 QVIAIREKLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPAW 834

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           MPI ++KNLR+C DCH+  KL+S V DRE ++RD  RFH F+ GSCSC D+W
Sbjct: 835 MPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/532 (24%), Positives = 225/532 (42%), Gaps = 99/532 (18%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR----------- 193
           L +C   SA      +H  ++ +G    VF++N L++ Y  CG + D R           
Sbjct: 32  LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91

Query: 194 ---------------------RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
                                 +F  M  R+V SW +++    +      A+ +F  M +
Sbjct: 92  VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151

Query: 233 EGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            G   PN+ T  CV+ +C  L   E+  ++   + +   + +  +  ALVDM ++CGA+D
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMD 211

Query: 292 TAKQLFGECK-------------------------------DRNLVLCNTIMSNYVRLGL 320
            A + F   K                               +R++V  N ++S   + G 
Sbjct: 212 FASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGR 271

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            REAL ++ +M   G RPD  T  S+++A A+L  L  G+  H  V+RN       + + 
Sbjct: 272 VREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASA 331

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           M+++Y KCG  + A R+F  + ++  VSW  LI G ++ G                    
Sbjct: 332 MVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYG-------------------- 371

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
                       F E++ELF  M +E + VD+  +  + S C     + L   +++   K
Sbjct: 372 -----------CFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLK 420

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           +G    + ++ +L+ M+A+CG+ Q A  +F  M +RD+ +WT  I A +  GN  +A E 
Sbjct: 421 SGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREF 480

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           F++M  + +    I +  +L A    G    G  ++  M     V P  V Y
Sbjct: 481 FDDMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTY 528



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 191/393 (48%), Gaps = 4/393 (1%)

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
           DE+  + N +  N +++ Y K G++  A +LFG    R++   NTIMS Y + G    AL
Sbjct: 85  DEI-TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNAL 143

Query: 326 AILDEMLLHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
            I   M   G   P+  T    + +   LG         G + +   +    +   ++DM
Sbjct: 144 DIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDM 203

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
            ++CG  + A + F  + N T++  NS++ G  K+  V+ A E+F  MP RD +SWN ++
Sbjct: 204 LVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVI 263

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
             L++     EA+++   M  + ++ D  T     +AC  L +L+  K ++  + +N  H
Sbjct: 264 SALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPH 323

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            D  +A+A+V+++A+CG  + A +VF  +  R+  +WT  IG     G   ++VELFN+M
Sbjct: 324 IDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQM 383

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
             + +  D      +++ C +   +  G  L  S+    G +  +V    ++ +  + G 
Sbjct: 384 RAELMAVDQFALATLISGCCNTMDICLGSQL-HSLCLKSGHTRAVVVSNSLISMYAKCGN 442

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           L  A +LI +   E + V W  ++ A  +  N+
Sbjct: 443 LQNA-ELIFNFMAERDIVSWTGMITAYSQVGNI 474



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 37/329 (11%)

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF-DHMSNKTVVSWNSLIA 414
           L   R  H  ++  GL     + NT++  Y+ CG    A  +  D ++   V++ N ++ 
Sbjct: 41  LTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMN 100

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G  K G +  A E+F  MP RD  SWNT++ G  Q   F  A+++F  M      +    
Sbjct: 101 GYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAF 160

Query: 475 MVG-VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG------------ 521
             G V  +CG LG  ++A  +   + K     D  + TALVDM  RCG            
Sbjct: 161 TFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRI 220

Query: 522 -DP------------------QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
            +P                    A+++F+ M +RDV +W   I A++  G   +A+++  
Sbjct: 221 KNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVV 280

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL-FRSMTDIHGVSPQIVHYGCMVDLLGR 621
           +M  +G++PDS  +   LTAC+    +  G  L  + + ++  + P +     MV+L  +
Sbjct: 281 DMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVA--SAMVELYAK 338

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            G   EA  +  S+  + N V W  L+  
Sbjct: 339 CGCFKEAKRVFSSLR-DRNSVSWTVLIGG 366


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/797 (34%), Positives = 428/797 (53%), Gaps = 54/797 (6%)

Query: 86  AQKAFD---YYIKDNETSATLFMYNSLIRGYSCIGL---GVEAISLYV-ELAGFGILPDK 138
           A+K FD     +KD+ +      + ++I GYS  G      E  SL + +    G   D 
Sbjct: 93  AEKLFDEMPVRVKDSVS------WTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI--------- 189
           F+F  V+ AC         +Q+H  + K+GF  +  ++N ++  Y +CGD+         
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206

Query: 190 ----------------------VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
                                     ++F+ M ER+ VSW +LI   ++     + + +F
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            EM  +G  PN +T   V+SACA   +L+ G  + A I  +    + +  N L+DMY KC
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +D AK++F   ++ + +  N++++  V  GL  +AL + ++M       D   + + +
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
              +       G + HGY +++G+     + N +I MY KCG  + A  +F  M  +  +
Sbjct: 387 GVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTI 446

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SW ++I    ++GD+  AR  F  MP R+ ++WN+ML    Q    EE ++L+  M S  
Sbjct: 447 SWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNG 506

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           ++ D +T      AC  L  + L   +  +  K G+  ++ +A ++V M++RCG  + A 
Sbjct: 507 VQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAK 566

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
             F  ++ +D+ +W A + A A  G G + ++ F +ML+   KP+ I +V VL+ CSH G
Sbjct: 567 NTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMG 626

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV +G H F SMT + G+SP   H+ CMVDLLGRAGLL +A DLI+ MP +PN  +W +L
Sbjct: 627 LVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSAL 686

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L +C+ H ++ +A  AA+++ ELD E S  +VLLSN+Y+ +G+  NVA +R  MK +GIR
Sbjct: 687 LGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIR 746

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG-YVPDLTNVLLDVDE 766
              G S IEV+ +VH FT  + SHP++  +   L EM   + D G Y+   ++V      
Sbjct: 747 TSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSV-----H 801

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           + KKY    HSEKLA AFGL++    MPI V+KNLR+C DCH   KL+S V  RE+I+RD
Sbjct: 802 RSKKY----HSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRD 857

Query: 827 NNRFHFFRQGSCSCSDF 843
             RFH F+ G CSC D+
Sbjct: 858 GYRFHHFKDGICSCKDY 874



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 240/595 (40%), Gaps = 140/595 (23%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++H  ++  G D  +F+ N L++ Y  CG   D  +VF E   RN+ +W ++I A     
Sbjct: 29  KLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSS 88

Query: 219 LPKEAVYLFFEMV-------------------------------------EEGIKPNSVT 241
              +A  LF EM                                      + G   +  +
Sbjct: 89  RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFS 148

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK------- 294
              V+ AC  L +  L  ++ A + +LG      + N++V MY+KCG VD A+       
Sbjct: 149 FTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIE 208

Query: 295 ------------------------QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
                                   Q+F    +R+ V  NT++S + + G   + LA+  E
Sbjct: 209 RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVE 268

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M   G  P+ +T  S +SA A   DL  G   H  +LR          N +IDMY KCG 
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            ++A R+F  +     +SWNSLI G++  G                       LG     
Sbjct: 329 LDLAKRVFKSLREHDHISWNSLITGVVHFG-----------------------LG----- 360

Query: 451 NMFEEAMELFRVMLSERIKVDRV---TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
              E+A+ LF  M    + +D     T++GV S   Y    +L   ++ Y  K+G+    
Sbjct: 361 ---EDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGEL---LHGYTIKSGMGSSA 414

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN-------------- 553
            +  A++ M+A+CGD  +A  VFR M  R+  +WTA I A +  G+              
Sbjct: 415 PVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPER 474

Query: 554 -----------------GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
                             E+ ++L+  M   G++PD I F   + AC+   +V  G  + 
Sbjct: 475 NIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVV 534

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAA 650
              T   G+S  +     +V +  R GL+ EA +   S  ++  D+I W ++LAA
Sbjct: 535 THATKF-GLSLNVSVANSIVTMYSRCGLIKEAKNTFDS--IDDKDLISWNAMLAA 586



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 193/464 (41%), Gaps = 46/464 (9%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-------- 334
           MY  CG    A Q+F E   RN+   NT++   V      +A  + DEM +         
Sbjct: 52  MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111

Query: 335 -----------------------------GPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
                                        G   D  +  S + A   LGD       H  
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHAL 171

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           V + G      I N+++ MY+KCG  ++A  +F  +   ++  WNS+I G  +      A
Sbjct: 172 VSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKA 231

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
            ++F+ MP RD +SWNT++   +Q     + + +F  M ++    + +T   V SAC   
Sbjct: 232 LQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAST 291

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
             L     ++A I +     D+     L+DM+A+CG    A +VF+ + + D  +W + I
Sbjct: 292 SDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLI 351

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
             +   G GE A+ LFN+M R  +  D  +   +L  CS     + G  L    T   G+
Sbjct: 352 TGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG-ELLHGYTIKSGM 410

Query: 606 SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAE 665
                    ++ +  + G   +A  + + MP+  N + W +++ A  +  ++      A 
Sbjct: 411 GSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFSRSGDIG----KAR 465

Query: 666 RITELDPEKSGV--HVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
              ++ PE++ V  + +LS  Y   G      ++ + M+  G++
Sbjct: 466 GYFDMMPERNIVTWNSMLST-YVQNGFSEEGLKLYVSMRSNGVQ 508



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 39/329 (11%)

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
            R  H  ++ +GL+    + N ++ MY  CG    A ++F    ++ + +WN++I  L+ 
Sbjct: 27  ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86

Query: 419 NGDVESAREVFSEMPGR--DHISWNTMLGGLTQENMFEEAMELFRVMLSER----IKVDR 472
           +  +  A ++F EMP R  D +SW TM+ G +Q      + E F +M+ +        D 
Sbjct: 87  SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD---------- 522
            +   V  ACG LG   LA  ++A + K G   +  +  ++V M+ +CGD          
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206

Query: 523 ---------------------PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
                                P +A+Q+F RM +RD  +W   I   +  G G Q + +F
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
            EM  QG  P+ + +  VL+AC+    +  G HL   +  +   S  +V    ++D+  +
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH-SLDLVFGNGLIDMYAK 325

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            G L  A  + KS+  E + + W SL+  
Sbjct: 326 CGCLDLAKRVFKSLR-EHDHISWNSLITG 353



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
           +A+ ++A +  +G+   + L   L+ M++ CG    A QVF+    R++  W   I A+ 
Sbjct: 26  IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
                  A +LF+EM  +    DS+ +  +++  S  G  ++ +  F  M
Sbjct: 86  SSSRMSDAEKLFDEMPVR--VKDSVSWTTMISGYSQNGFHSRSFETFSLM 133


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/714 (34%), Positives = 407/714 (57%), Gaps = 38/714 (5%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI  D F    + ++  K+    +  Q+H  ++ +G     F+   LI+     GDI   
Sbjct: 17  GIHSDSFYASLIDSSTHKA----QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFA 72

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R+VFD++    V  W ++I   +R +  ++A+ ++ +M    + P+S T   ++ AC  L
Sbjct: 73  RQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGL 132

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNT 310
            +L++G  V A +  LG +A+  + N L+ +Y KC  +  A+ +F      +R +V    
Sbjct: 133 SHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTA 192

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           I+S Y + G   EAL I  +M     +PD V ++S ++A   L DL  GR  H  V++ G
Sbjct: 193 IVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMG 252

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           LE    +  ++  MY KCG+                               V +A+ +F 
Sbjct: 253 LETEPDLLISLNTMYAKCGQ-------------------------------VATAKILFD 281

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
           +M   + I WN M+ G  +    ++A++LF  M+++ ++ D +++    SAC  +G+L+ 
Sbjct: 282 KMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQ 341

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
           A+W+  Y+ ++    D+ +++AL+DMFA+CG  + A  VF R   RDV  W+A I    +
Sbjct: 342 ARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGL 401

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G   +A+ L+  M R G+ P+ + F+G+L AC+H G+V +GW  F  M D H ++PQ  
Sbjct: 402 HGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQ 460

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           HY C++DLLGRAG L +A ++IK MPV+P   +WG+LL+AC+KH++V++  YAA+++  +
Sbjct: 461 HYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSI 520

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           DP  +G +V LSN+YA+A  W  VA VR++MKE+G+ K  G S +EV G++  F  GD+S
Sbjct: 521 DPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKS 580

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           HP    I   +  +  RL++ G+V +    L D++++E +  L  HSE++ +A+GLIST 
Sbjct: 581 HPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTP 640

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +   +R+ KNLR C +CH+  KL+SK+  REI+VRD NRFH F+ G CSC D+W
Sbjct: 641 QGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 162/539 (30%), Positives = 271/539 (50%), Gaps = 48/539 (8%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           LA+P + T +  H       DS     + +     +L+Q H  +L  GL      I+K++
Sbjct: 7   LASPFLYTNSGIHS------DSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLI 60

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
              +  G    +T+A++ FD     +     +F +N++IRGYS      +A+ +Y ++  
Sbjct: 61  HASSSYG---DITFARQVFD-----DLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQL 112

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
             + PD FTFP +L AC   S    G  VH  + ++GF+ DVFV+N LI  Y +C  +  
Sbjct: 113 ARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGC 172

Query: 192 GRRVFD--EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            R VF+   + ER +VSWT+++ A A+   P EA+ +F +M +  +KP+ V +V V++A 
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAF 232

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             LQ+LE G  + A + ++G++    ++ +L  MY KCG V TAK LF + K  NL+L N
Sbjct: 233 TCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++S Y + G A++A+ +  EM+    RPD +++ SA+SA AQ+G L   R    YV R+
Sbjct: 293 AMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRS 352

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
                  I + +IDM+ KCG  E A  +FD   ++ VV W+++I G   +G         
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQA------- 405

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                    EA+ L+R M  + +  + VT +G+  AC + G + 
Sbjct: 406 ------------------------REAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVR 441

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              W +  +  + I+   Q    ++D+  R G   +A +V + M  +  V+ W A + A
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/764 (34%), Positives = 420/764 (54%), Gaps = 40/764 (5%)

Query: 85   YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
            YA K F +     +  + +F +N  +  +   G  V AI  +  L    I  D  T   +
Sbjct: 846  YAMKMFPF-----DQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900

Query: 145  LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
            L+A   +     G Q+H  ++K  F   V V N L+N Y + G +    + F    E ++
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 205  VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA---KLQNLELGDRV 261
            +SW ++I + A+ +L  EA+  F +++ +G+KP+  T+  V+ AC+   + +   LG +V
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 262  CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
              Y  + G+  ++ +  AL+D+Y K G +D A+ L     D +L   N IM  Y++   +
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080

Query: 322  REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            R+AL     M   G   D +T+ +A+ AS  L +L  G+    Y ++ G      + + +
Sbjct: 1081 RKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGV 1140

Query: 382  IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
            +DMY+KCG                               D+ +A E+F E+   D ++W 
Sbjct: 1141 LDMYIKCG-------------------------------DMPNALELFGEISRPDEVAWT 1169

Query: 442  TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            TM+ G  +    + A+ ++ +M    ++ D  T   +  A   L AL+  K I+A + K 
Sbjct: 1170 TMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKL 1229

Query: 502  GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
                D  + T+LVDM+ +CG  Q A +VFR+M+ R V  W A +  +A  G+ ++A+ LF
Sbjct: 1230 DYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLF 1289

Query: 562  NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
              M   GI+PD + F+GVL+ACSH GL ++ +  F +M   +G++P+I HY C+VD LGR
Sbjct: 1290 RTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGR 1349

Query: 622  AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
            AG + EA ++I SMP + +  ++ +LL AC+   + + A   A+++  LDP  S  +VLL
Sbjct: 1350 AGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLL 1409

Query: 682  SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
            SNIYA++ +W +V   R  MK + ++K PG S I+V  KVH F   D SHP+ + I   +
Sbjct: 1410 SNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKI 1469

Query: 742  REMNCRLRDAG-YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
             ++  R+R+ G YVPD    LLDV+E+EK+  L +HSEKLA+AFGLIST  +  IRV+KN
Sbjct: 1470 EDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKN 1529

Query: 801  LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            LR+C DCHS  K +SK+  REI++RD NRFH FR G+CSC D+W
Sbjct: 1530 LRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 256/578 (44%), Gaps = 64/578 (11%)

Query: 103  LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP--DKFTFPFVLNACTKSSAFGEGVQV 160
            LF+  +L+  Y   GL  +A  L      F  +P  D   +  +L A  ++S   E ++ 
Sbjct: 752  LFVSGALVNIYCKYGLVGQARLL------FDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 161  HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR--------------VFDEMSERNVVS 206
              A  + GF  D    +C+I   G   D+ + R+               FD+ S  N+ +
Sbjct: 806  FSAFHRSGFXPDFSNLHCVIG--GVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS--NIFA 861

Query: 207  WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
            W   +           A+  F  ++   I  +SVT+V ++SA     +L+LG+++ A + 
Sbjct: 862  WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVI 921

Query: 267  ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
            +        + N+L++MY K G V  A++ F    + +L+  NT++S+Y +  L  EA+ 
Sbjct: 922  KSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981

Query: 327  ILDEMLLHGPRPDRVTMLSAVSASAQLGD----LLCGRMCHGYVLRNGLEGWDSICNTMI 382
               ++L  G +PD+ T+ S + A +  GD       G   H Y ++ G+     +   +I
Sbjct: 982  TFRDLLRDGLKPDQFTLASVLRACST-GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALI 1040

Query: 383  DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            D+Y K GK + A                      + +G  +            D  SWN 
Sbjct: 1041 DLYSKGGKMDEA--------------------EFLLHGKYDF-----------DLASWNA 1069

Query: 443  MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
            ++ G  + N   +A+E F +M    I +D +T+     A G L  L   K I AY  K G
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG 1129

Query: 503  IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
             + D+ +++ ++DM+ +CGD   A+++F  + + D  AWT  I      G+ + A+ +++
Sbjct: 1130 FNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYH 1189

Query: 563  EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
             M   G++PD   F  ++ A S    + QG  +  ++  +       V    +VD+  + 
Sbjct: 1190 LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVG-TSLVDMYCKC 1248

Query: 623  GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            G + +A  + + M V    V W ++L    +H +VD A
Sbjct: 1249 GSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVDEA 1285



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 253/584 (43%), Gaps = 65/584 (11%)

Query: 157  GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
            G + H  IV  G   D ++ N LI  Y +CG +   R+VFD+ S+R++V+W S++ A A+
Sbjct: 630  GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689

Query: 217  -RDLPKEAVY----LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
              D   E V     LF  + E G     +T+  ++  C     +++ + V  Y  ++G +
Sbjct: 690  FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFE 749

Query: 272  ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
             +  +  ALV++Y K G V  A+ LF +  +R+ VL N ++  YV      EAL      
Sbjct: 750  LDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF 809

Query: 332  LLHGPRPD------------------RVTMLSAVSASA---------------------- 351
               G  PD                  R      V A A                      
Sbjct: 810  HRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEF 869

Query: 352  -QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY------MKCGKQEMACRIFDHMSNK 404
               G ++    C   +LR+ + G DS+   +I         +  G+Q  A  I    +  
Sbjct: 870  LHAGQIVAAIDCFKTLLRSTI-GHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928

Query: 405  TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
              VS NSL+    K G V +A + F   P  D ISWNTM+    Q N+  EA+  FR +L
Sbjct: 929  VPVS-NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLL 987

Query: 465  SERIKVDRVTMVGVASAC--GYLGA-LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
             + +K D+ T+  V  AC  G  G    L   ++ Y  K GI  D  ++TAL+D++++ G
Sbjct: 988  RDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGG 1047

Query: 522  DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
                A  +       D+++W A +          +A+E F+ M   GI  D I     + 
Sbjct: 1048 KMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIK 1107

Query: 582  ACSHGGLVN--QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
            A   G L+N  QG  +      + G +  +     ++D+  + G +  AL+L   +   P
Sbjct: 1108 AS--GCLINLKQGKQIQAYAIKL-GFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RP 1163

Query: 640  NDVIWGSLLAACQKHQNVD--IAAYAAERITELDPEKSGVHVLL 681
            ++V W ++++   ++ + D  ++ Y   R++ + P++     L+
Sbjct: 1164 DEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLI 1207



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 183/432 (42%), Gaps = 58/432 (13%)

Query: 252  LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
            + +L+LG R  A I   G   +  + N L+ MY KCG++ +A+Q+F +  DR+LV  N+I
Sbjct: 624  MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 312  MSNYVRLGLAR-----EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
            ++ Y +   +      E   +   +   G    R+T+   +      G +      HGY 
Sbjct: 684  LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 367  LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK-------- 418
            ++ G E    +   ++++Y K G    A  +FD M  +  V WN ++   ++        
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 419  -------------------------NGDVESAREVFSEM------------PGRDHISWN 441
                                     N DV + R+  +E              G +  +WN
Sbjct: 804  RFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWN 863

Query: 442  TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
              L           A++ F+ +L   I  D VT+V + SA      LDL + I+A + K+
Sbjct: 864  KKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS 923

Query: 502  GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
                 + ++ +L++M+++ G    A + F    + D+ +W   I + A      +A+  F
Sbjct: 924  SFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTF 983

Query: 562  NEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVH----YGCMV 616
             ++LR G+KPD      VL ACS G   ++G +    S   ++ +   I++       ++
Sbjct: 984  RDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALI 1040

Query: 617  DLLGRAGLLGEA 628
            DL  + G + EA
Sbjct: 1041 DLYSKGGKMDEA 1052


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/741 (36%), Positives = 416/741 (56%), Gaps = 46/741 (6%)

Query: 114 SCI---GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG-EGVQVHGAIVKMGF 169
           SC+   G   EA+ L+ E    G+LP+ FT      AC  S  F   G  V G + K+GF
Sbjct: 125 SCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGF 184

Query: 170 -DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
              DV V   LI+ + + GD+V  RRVFD + ER VV WT LI   A+     EAV LF 
Sbjct: 185 WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFL 244

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC- 287
           +M+E G +P+  T+  ++SAC +L +  LG ++ +    LG+++++ +   LVDMY K  
Sbjct: 245 DMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSH 304

Query: 288 --GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD-EMLLHGPRPDRVTML 344
              ++  A+++F      N++    ++S YV+ G     + IL  +ML  G RP+ +T  
Sbjct: 305 NGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYS 364

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A A LGD   GR  H + +++ L   + + N ++ MY                   
Sbjct: 365 SMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMY------------------- 405

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                        ++G +E AR  F ++  ++ +S++  L G  + N +++  ++ R+ L
Sbjct: 406 ------------AESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-YQIERMEL 452

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
                +   T   + SA   +G L   + ++A   K G   D  +  +LV M++RCG   
Sbjct: 453 G----ISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLV 508

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A QVF  M   +V +WT+ I  +A  G   +A+ELF++M+  G+KP+ + ++ VL+ACS
Sbjct: 509 DACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACS 568

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLV +G   FR M   HG+ P++ HY CMVDLLGR+GL+ +ALD I  MP + + ++W
Sbjct: 569 HAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVW 628

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LL AC+ H N+DI   AA  + +L+P+    +VLLSN+YA AG W  VAR+R  M+++
Sbjct: 629 KTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDK 688

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
            + K  G S + V+  +HEF +GD SHP+   I + L  +   ++  GYVPD + VL D+
Sbjct: 689 NLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDM 748

Query: 765 DEQEKKYLLSHHSEKLAMAFGLIS-TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
            ++ K+  L  HSEK+A+AFGLIS TS T PIR+ KNLR+C DCHS  K VSK   REII
Sbjct: 749 SDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREII 808

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           +RD+NRFH  + G CSC ++W
Sbjct: 809 LRDSNRFHRMKDGECSCGEYW 829



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 226/464 (48%), Gaps = 54/464 (11%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T+ ++  LI  Y+  G   EA+ L++++   G  PD++T   +L+ACT+  +F  G Q+H
Sbjct: 219 TVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLH 278

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGD---IVDGRRVFDEMSERNVVSWTSLICACARRD 218
              +++G + D  V   L++ Y +  +   + + R VF+ M + NV++WT+L+    +R 
Sbjct: 279 SLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRG 338

Query: 219 LPKEAVYLFF-EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
                V + F +M+ EGI+PN +T   ++ ACA L + + G ++  +  +  +    ++ 
Sbjct: 339 SQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVG 398

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM------SNYVRLGLAREALAILDEM 331
           NALV MY + G+++ A+  F +  ++N+V  +  +      + Y    + R  L I    
Sbjct: 399 NALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGI---- 454

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
                     T  S +SA+A +G L  G+  H   L+ G     +I N+++ MY +CG  
Sbjct: 455 -------STFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYL 507

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             AC++FD M++  V+SW S+I+GL K+G   +AR                         
Sbjct: 508 VDACQVFDEMNDHNVISWTSMISGLAKHG--YAAR------------------------- 540

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLA 510
               A+ELF  M++  +K + VT + V SAC + G +   K  +  ++K +G+   M+  
Sbjct: 541 ----ALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHY 596

Query: 511 TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
             +VD+  R G  + A+     M  + D   W   +GA     N
Sbjct: 597 ACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNN 640



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 239/537 (44%), Gaps = 77/537 (14%)

Query: 157 GVQVHGAIVKMG--FDRDVFVENCLINFYGECGDIVDGRRVFDEM--SERNVVSWTSLIC 212
           G  + G +++ G   + D  V N L+  Y +C  +   R VFD M    R++VSWT++  
Sbjct: 66  GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL-GDRVCAYIDELGMK 271
             +R     EA+ LF E +EEG+ PN+ T+     AC   +   L G  V   + +LG  
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFW 185

Query: 272 ANALMVN-ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
              + V  AL+DM+ K G +   +++F    +R +V+   +++ Y + G + EA+ +  +
Sbjct: 186 GTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLD 245

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           ML +G +PD+ T+ S +SA  +LG    G+  H   LR GLE    +   ++DMY K   
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305

Query: 391 QEM---ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
            +    A  +F+ M    V++W +L++G ++ G                           
Sbjct: 306 GQSLHNAREVFNRMPKHNVMAWTALLSGYVQRG--------------------------- 338

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
           +Q+N   + M LF  ML+E I+ + +T   +  AC  LG  D  + I+ +  K+ +    
Sbjct: 339 SQDN---QVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLN 395

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT------------------------- 542
            +  ALV M+A  G  + A   F ++ ++++ +++                         
Sbjct: 396 VVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGIS 455

Query: 543 -----AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
                + I A A  G   +   L    L+ G   D  +   +++  S  G +     +F 
Sbjct: 456 TFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFD 515

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAAC 651
            M D       ++ +  M+  L + G    AL+L   M    V+PNDV + ++L+AC
Sbjct: 516 EMND-----HNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSAC 567



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 126/320 (39%), Gaps = 77/320 (24%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF----- 90
           LK C  L +    +Q H H +K  L       + +V   A+ G+ E   +A         
Sbjct: 367 LKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNM 426

Query: 91  -----------------DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
                            DY I+  E   + F + SLI   + +G+               
Sbjct: 427 VSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGM--------------- 471

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
                                 +G ++H   +K GF  D  + N L++ Y  CG +VD  
Sbjct: 472 --------------------LTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDAC 511

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           +VFDEM++ NV+SWTS+I   A+      A+ LF +M+  G+KPN VT + V+SAC+   
Sbjct: 512 QVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAG 571

Query: 254 NLELGDRVCAYIDE-LGMKANALMVNALVDMYMKCGAVDTA----------------KQL 296
            ++ G      + +  G+         +VD+  + G V+ A                K L
Sbjct: 572 LVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTL 631

Query: 297 FGECKDRNLVLCNTIMSNYV 316
            G CK  N +    I +N+V
Sbjct: 632 LGACKTHNNMDIGEIAANHV 651


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/658 (37%), Positives = 387/658 (58%), Gaps = 40/658 (6%)

Query: 196  FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
            +  + + NV SW S+I   AR     EA+  F  + + G+ P   +  C I +C+ L +L
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158

Query: 256  ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
              G          G + +  + +AL+DMY KCG +  A+ LF E   RN+V   ++++ Y
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218

Query: 316  VRLGLAREALAILDEMLLHGPRP--------DRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            V+   A  AL +  + L              D V M+S +SA +++         HG+V+
Sbjct: 1219 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 1278

Query: 368  RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            + G +G   + NT++D Y KCG+  ++ ++FD M  K  +SWNS+IA   ++G       
Sbjct: 1279 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG------- 1331

Query: 428  VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLG 486
                            L G        EA+E+F  M+    ++ + VT+  V  AC + G
Sbjct: 1332 ----------------LSG--------EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAG 1367

Query: 487  ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
            AL   K I+  + K  +  ++ + T+++DM+ +CG  + A + F RM++++V +WTA + 
Sbjct: 1368 ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVA 1427

Query: 547  AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
               M G  ++A+++F +M+R G+KP+ I FV VL ACSH GLV +GWH F +M   + + 
Sbjct: 1428 GYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIE 1487

Query: 607  PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
            P I HYGCMVDL GRAG L EA +LIK M ++P+ V+WGSLL AC+ H+NVD+   AA++
Sbjct: 1488 PGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQK 1547

Query: 667  ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
            + ELDP+  G +VLLSN+YA AG+W +V R+R+ MK + + K PG S +E+ G+VH F  
Sbjct: 1548 LFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLV 1607

Query: 727  GDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGL 786
            GD+ HP    I   L ++   L+  GYVP++T+VL DVDE+EK+ +L  HSEKLA+AFG+
Sbjct: 1608 GDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGV 1667

Query: 787  ISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            ++++    I ++KNLR+C DCH+  KL+SK+  R+ +VRD+ RFH F+ G CSC D+W
Sbjct: 1668 MNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 209/383 (54%)

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
           +N +   ++ A I   G+  + L+   L+ +Y   G +  A  LF + ++      N I+
Sbjct: 38  KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
                 GL+ +AL +   M+  G   D+ T    + A      +  G++ HG +++ G  
Sbjct: 98  RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
           G   + N +ID Y KCG    A ++F+ M  + VVSW ++I+GLI  GD++ AR +F E+
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           P ++ +SW  M+ G  +    EEA+ELF+ M +E I  +  TMV +  AC  +G L L +
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I+ Y  KN I   + L TAL+DM+++CG  + A++VF  M ++ +  W + I ++ + G
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G++A+ LF+EM R  +KPD+I F+GVL AC H   V +G   F  MT  +G++P   HY
Sbjct: 338 LGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHY 397

Query: 613 GCMVDLLGRAGLLGEALDLIKSM 635
            CM +L  R+  L EA    K +
Sbjct: 398 ECMTELYARSNNLDEAFKSTKEV 420



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 235/473 (49%), Gaps = 45/473 (9%)

Query: 106  YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
            +NS+I   +  G  VEA+  +  L   G++P + +FP  + +C+       G   H    
Sbjct: 1110 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 1169

Query: 166  KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
              GF+ D+FV + LI+ Y +CG + D R +FDE+  RNVVSWTS+I    + +    A+ 
Sbjct: 1170 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 1229

Query: 226  LFFEMVEE--------GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            LF + +EE         +  +SV MV V+SAC+++    + + V  ++ + G   +  + 
Sbjct: 1230 LFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVG 1289

Query: 278  NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GP 336
            N L+D Y KCG    +K++F   ++++ +  N++++ Y + GL+ EAL +   M+ H G 
Sbjct: 1290 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 1349

Query: 337  RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            R + VT+ + + A A  G L  G+  H  V++  LE    +  ++IDMY KCG+ EMA +
Sbjct: 1350 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 1409

Query: 397  IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
             FD M  K V SW +++AG                M GR                  +EA
Sbjct: 1410 TFDRMKEKNVKSWTAMVAGY--------------GMHGRA-----------------KEA 1438

Query: 457  MELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVD 515
            +++F  M+   +K + +T V V +AC + G ++    W  A   K  I   ++    +VD
Sbjct: 1439 LDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVD 1498

Query: 516  MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
            +F R G    A  + +RM+ K D   W + +GA  +  N   GE A +   E+
Sbjct: 1499 LFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFEL 1551



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 182/363 (50%), Gaps = 44/363 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+NCK    L+Q H  I++ GL +      K++   +  G    + YA   F Y I++  
Sbjct: 34  LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHG---RIAYAILLF-YQIQNPC 89

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           T    F +N +IR  +  GL  +A+ LY  +   GI  DKFTFPFV+ ACT   +   G 
Sbjct: 90  T----FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK 145

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGE-------------------------------CG 187
            VHG+++K GF  DVFV+N LI+FY +                               CG
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
           D+ + RR+FDE+  +NVVSWT++I    R   P+EA+ LF  M  E I PN  TMV +I 
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC ++  L LG  +  Y  +  ++    +  AL+DMY KCG++  A ++F     ++L  
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMC 362
            N+++++    GL +EAL +  EM     +PD +T +  + A   + ++  G     RM 
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMT 385

Query: 363 HGY 365
             Y
Sbjct: 386 QHY 388



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 7/218 (3%)

Query: 86   AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFV 144
            ++K FD+  + ++ S     +NS+I  Y+  GL  EA+ ++  +    G+  +  T   V
Sbjct: 1305 SKKVFDWMEEKDDIS-----WNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAV 1359

Query: 145  LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
            L AC  + A   G  +H  ++KM  + +V V   +I+ Y +CG +   ++ FD M E+NV
Sbjct: 1360 LLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNV 1419

Query: 205  VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG-DRVCA 263
             SWT+++         KEA+ +F++MV  G+KPN +T V V++AC+    +E G     A
Sbjct: 1420 KSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNA 1479

Query: 264  YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
               +  ++        +VD++ + G ++ A  L    K
Sbjct: 1480 MKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 1517



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 12/215 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A++ FD     N  S     + ++I GY       EA+ L+  +    I P+++T  
Sbjct: 207 LQEARRIFDEIPSKNVVS-----WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMV 261

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            ++ ACT+      G  +H   +K   +  V++   LI+ Y +CG I D   VF+ M  +
Sbjct: 262 SLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           ++ +W S+I +     L +EA+ LF EM    +KP+++T + V+ AC  ++N++ G   C
Sbjct: 322 SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG---C 378

Query: 263 AYIDEL----GMKANALMVNALVDMYMKCGAVDTA 293
           AY   +    G+         + ++Y +   +D A
Sbjct: 379 AYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 136/329 (41%), Gaps = 70/329 (21%)

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R  H  ++R+GL     +   +I +Y   G+   A  +F  + N    +WN +I     N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G                               + E+A+ L++ M+ + I  D+ T   V 
Sbjct: 104 G-------------------------------LSEQALMLYKNMVCQGIAADKFTFPFVI 132

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
            AC    ++DL K ++  + K G   D+ +   L+D + +CG  + A++VF +M  R+V 
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192

Query: 540 AWTAAIGAMAMEG------------------------NG-------EQAVELFNEMLRQG 568
           +WT  I  +   G                        NG       E+A+ELF  M  + 
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN 252

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD--IHGVSPQIVHYG-CMVDLLGRAGLL 625
           I P+    V ++ AC+  G++  G    R + D  I       V+ G  ++D+  + G +
Sbjct: 253 IFPNEYTMVSLIKACTEMGILTLG----RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSI 308

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            +A+++ ++MP   +   W S++ +   H
Sbjct: 309 KDAIEVFETMP-RKSLPTWNSMITSLGVH 336


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/764 (34%), Positives = 420/764 (54%), Gaps = 40/764 (5%)

Query: 85   YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
            YA K F +     +  + +F +N  +  +   G  V AI  +  L    I  D  T   +
Sbjct: 846  YAMKMFPF-----DQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900

Query: 145  LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
            L+A   +     G Q+H  ++K  F   V V N L+N Y + G +    + F    E ++
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 205  VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA---KLQNLELGDRV 261
            +SW ++I + A+ +L  EA+  F +++ +G+KP+  T+  V+ AC+   + +   LG +V
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 262  CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
              Y  + G+  ++ +  AL+D+Y K G +D A+ L     D +L   N IM  Y++   +
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080

Query: 322  REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            R+AL     M   G   D +T+ +A+ AS  L +L  G+    Y ++ G      + + +
Sbjct: 1081 RKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGV 1140

Query: 382  IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
            +DMY+KCG                               D+ +A E+F E+   D ++W 
Sbjct: 1141 LDMYIKCG-------------------------------DMPNALELFGEISRPDEVAWT 1169

Query: 442  TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            TM+ G  +    + A+ ++ +M    ++ D  T   +  A   L AL+  K I+A + K 
Sbjct: 1170 TMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKL 1229

Query: 502  GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
                D  + T+LVDM+ +CG  Q A +VFR+M+ R V  W A +  +A  G+ ++A+ LF
Sbjct: 1230 DYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLF 1289

Query: 562  NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
              M   GI+PD + F+GVL+ACSH GL ++ +  F +M   +G++P+I HY C+VD LGR
Sbjct: 1290 RTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGR 1349

Query: 622  AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
            AG + EA ++I SMP + +  ++ +LL AC+   + + A   A+++  LDP  S  +VLL
Sbjct: 1350 AGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLL 1409

Query: 682  SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
            SNIYA++ +W +V   R  MK + ++K PG S I+V  KVH F   D SHP+ + I   +
Sbjct: 1410 SNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKI 1469

Query: 742  REMNCRLRDAG-YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
             ++  R+R+ G YVPD    LLDV+E+EK+  L +HSEKLA+AFGLIST  +  IRV+KN
Sbjct: 1470 EDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKN 1529

Query: 801  LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            LR+C DCHS  K +SK+  REI++RD NRFH FR G+CSC D+W
Sbjct: 1530 LRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 256/578 (44%), Gaps = 64/578 (11%)

Query: 103  LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP--DKFTFPFVLNACTKSSAFGEGVQV 160
            LF+  +L+  Y   GL  +A  L      F  +P  D   +  +L A  ++S   E ++ 
Sbjct: 752  LFVSGALVNIYCKYGLVGQARLL------FDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 161  HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR--------------VFDEMSERNVVS 206
              A  + GF  D    +C+I   G   D+ + R+               FD+ S  N+ +
Sbjct: 806  FSAFHRSGFFPDFSNLHCVIG--GVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS--NIFA 861

Query: 207  WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
            W   +           A+  F  ++   I  +SVT+V ++SA     +L+LG+++ A + 
Sbjct: 862  WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVI 921

Query: 267  ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
            +        + N+L++MY K G V  A++ F    + +L+  NT++S+Y +  L  EA+ 
Sbjct: 922  KSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981

Query: 327  ILDEMLLHGPRPDRVTMLSAVSASAQLGD----LLCGRMCHGYVLRNGLEGWDSICNTMI 382
               ++L  G +PD+ T+ S + A +  GD       G   H Y ++ G+     +   +I
Sbjct: 982  TFRDLLRDGLKPDQFTLASVLRACST-GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALI 1040

Query: 383  DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            D+Y K GK + A                      + +G  +            D  SWN 
Sbjct: 1041 DLYSKGGKMDEA--------------------EFLLHGKYDF-----------DLASWNA 1069

Query: 443  MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
            ++ G  + N   +A+E F +M    I +D +T+     A G L  L   K I AY  K G
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG 1129

Query: 503  IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
             + D+ +++ ++DM+ +CGD   A+++F  + + D  AWT  I      G+ + A+ +++
Sbjct: 1130 FNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYH 1189

Query: 563  EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
             M   G++PD   F  ++ A S    + QG  +  ++  +       V    +VD+  + 
Sbjct: 1190 LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVG-TSLVDMYCKC 1248

Query: 623  GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            G + +A  + + M V    V W ++L    +H +VD A
Sbjct: 1249 GSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVDEA 1285



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 253/584 (43%), Gaps = 65/584 (11%)

Query: 157  GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
            G + H  IV  G   D ++ N LI  Y +CG +   R+VFD+ S+R++V+W S++ A A+
Sbjct: 630  GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689

Query: 217  -RDLPKEAVY----LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
              D   E V     LF  + E G     +T+  ++  C     +++ + V  Y  ++G +
Sbjct: 690  FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFE 749

Query: 272  ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
             +  +  ALV++Y K G V  A+ LF +  +R+ VL N ++  YV      EAL      
Sbjct: 750  LDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF 809

Query: 332  LLHGPRPD------------------RVTMLSAVSASA---------------------- 351
               G  PD                  R      V A A                      
Sbjct: 810  HRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEF 869

Query: 352  -QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY------MKCGKQEMACRIFDHMSNK 404
               G ++    C   +LR+ + G DS+   +I         +  G+Q  A  I    +  
Sbjct: 870  LHAGQIVAAIDCFKTLLRSTI-GHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928

Query: 405  TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
              VS NSL+    K G V +A + F   P  D ISWNTM+    Q N+  EA+  FR +L
Sbjct: 929  VPVS-NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLL 987

Query: 465  SERIKVDRVTMVGVASAC--GYLGA-LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
             + +K D+ T+  V  AC  G  G    L   ++ Y  K GI  D  ++TAL+D++++ G
Sbjct: 988  RDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGG 1047

Query: 522  DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
                A  +       D+++W A +          +A+E F+ M   GI  D I     + 
Sbjct: 1048 KMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIK 1107

Query: 582  ACSHGGLVN--QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
            A   G L+N  QG  +      + G +  +     ++D+  + G +  AL+L   +   P
Sbjct: 1108 AS--GCLINLKQGKQIQAYAIKL-GFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RP 1163

Query: 640  NDVIWGSLLAACQKHQNVD--IAAYAAERITELDPEKSGVHVLL 681
            ++V W ++++   ++ + D  ++ Y   R++ + P++     L+
Sbjct: 1164 DEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLI 1207



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 183/432 (42%), Gaps = 58/432 (13%)

Query: 252  LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
            + +L+LG R  A I   G   +  + N L+ MY KCG++ +A+Q+F +  DR+LV  N+I
Sbjct: 624  MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 312  MSNYVRLGLAR-----EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
            ++ Y +   +      E   +   +   G    R+T+   +      G +      HGY 
Sbjct: 684  LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 367  LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK-------- 418
            ++ G E    +   ++++Y K G    A  +FD M  +  V WN ++   ++        
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 419  -------------------------NGDVESAREVFSEM------------PGRDHISWN 441
                                     N DV + R+  +E              G +  +WN
Sbjct: 804  RFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWN 863

Query: 442  TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
              L           A++ F+ +L   I  D VT+V + SA      LDL + I+A + K+
Sbjct: 864  KKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS 923

Query: 502  GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
                 + ++ +L++M+++ G    A + F    + D+ +W   I + A      +A+  F
Sbjct: 924  SFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTF 983

Query: 562  NEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVH----YGCMV 616
             ++LR G+KPD      VL ACS G   ++G +    S   ++ +   I++       ++
Sbjct: 984  RDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALI 1040

Query: 617  DLLGRAGLLGEA 628
            DL  + G + EA
Sbjct: 1041 DLYSKGGKMDEA 1052


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/736 (35%), Positives = 422/736 (57%), Gaps = 10/736 (1%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +  +I GY  I     A  ++  +   G+ P++     VL+A       G    +H  + 
Sbjct: 191 WTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVH 250

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGR-RVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           K GF+RDV V   ++N Y +  +++D   + F+ M+ RN  +W+++I A ++     +A 
Sbjct: 251 KTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAF 310

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            ++     + + P+  +M+  ++   ++ + ++        D++  + N +  NA++  Y
Sbjct: 311 AVYQRDPLKSV-PSRTSMLTGLARYGRIDDAKI------LFDQI-HEPNVVSWNAMITGY 362

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           M+   VD A+ LF     RN +    +++ Y R G + +AL  L  +   G  P   ++ 
Sbjct: 363 MQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLT 422

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S+  A + +  L  G+  H   ++ G +    +CN +I +Y K        +IFD M+ K
Sbjct: 423 SSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVK 482

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
             VS+NS ++ L++N   + AR+VF+ MP  D +SW T++    Q +   EA+E+FR ML
Sbjct: 483 DTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSML 542

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
            ER   +   +  +    G LGA  L + I+    K G+   + +A ALV M+ +C    
Sbjct: 543 HERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD 602

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            +++VF  ME+RD+  W   I   A  G G +A+ ++  M+  G+ P+ + FVG+L ACS
Sbjct: 603 -SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACS 661

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLV++G   F+SM+  +G++P + HY CMVDLLGRAG +  A   I  MP+EP+ VIW
Sbjct: 662 HSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIW 721

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LL AC+ H+NV+I   AAE++  ++P  +G +V+LSNIY+S G W  VA+VR  MKE+
Sbjct: 722 SALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKER 781

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
           G+ K PG S +++  K+H F +GDE H ++ NI + L E+   L+  GYVPD   VL D+
Sbjct: 782 GVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDI 841

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           DE++K+  L +HSEKLA+A+GL+ T K MPI+++KNLR+C DCH+F K VS V  REI V
Sbjct: 842 DEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDV 901

Query: 825 RDNNRFHFFRQGSCSC 840
           RD NRFH FR GSCSC
Sbjct: 902 RDGNRFHHFRNGSCSC 917



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 127/584 (21%), Positives = 243/584 (41%), Gaps = 94/584 (16%)

Query: 76  QMGTFESLTYAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           ++G    L  A++ FD    +D      +  +NS+I  Y   G+     SL   ++G  +
Sbjct: 42  ELGRLGRLHEAREVFDSMPFRD------IIAWNSMIFAYCNNGMPDAGRSLADAISGGNL 95

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
                T   +L+   ++    +  +V      MG  R+    N ++  Y + GDI   R+
Sbjct: 96  R----TGTILLSGYARAGRVRDARRVFDG---MGV-RNTVAWNAMVTCYVQNGDITLARK 147

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE---------------------- 232
           +FD M  R+V SW +++       L +EA  LF  M E                      
Sbjct: 148 LFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRA 207

Query: 233 ---------EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
                    EG+ P    +V V+SA   L    + + +   + + G + + ++  A+++ 
Sbjct: 208 WDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNG 267

Query: 284 YMK-CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           Y K    +D+A + F     RN    +TI++   + G   +A A+     L    P R +
Sbjct: 268 YTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV-PSRTS 326

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           ML+ ++   ++ D                                      A  +FD + 
Sbjct: 327 MLTGLARYGRIDD--------------------------------------AKILFDQIH 348

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
              VVSWN++I G ++N  V+ A ++F+ MP R+ ISW  M+ G  +    E+A+   + 
Sbjct: 349 EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQA 408

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           +  + +     ++     AC  + AL+  K +++   K G   +  +  AL+ ++ +   
Sbjct: 409 LHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRS 468

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
                Q+F RM  +D  ++ + + A+      ++A ++FN M      PD + +  +++A
Sbjct: 469 IGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM----PSPDVVSWTTIISA 524

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           C+     N+   +FRSM  +H    ++ +   +  LLG +G LG
Sbjct: 525 CAQADQGNEAVEIFRSM--LH--ERELPNPPILTILLGLSGNLG 564



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 173/370 (46%), Gaps = 19/370 (5%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G +  A+++F     R+++  N+++  Y   G+     ++ D +     R   + +LS
Sbjct: 45  RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTI-LLS 103

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
             + + ++ D    R+  G  +RN +  W    N M+  Y++ G   +A ++FD M ++ 
Sbjct: 104 GYARAGRVRD--ARRVFDGMGVRNTV-AW----NAMVTCYVQNGDITLARKLFDAMPSRD 156

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V SWN+++ G   +  +E AR +F  MP R+ +SW  M+ G         A ++FR ML 
Sbjct: 157 VSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLC 216

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR-CGDPQ 524
           E +  ++  +V V SA  +LG   + + I+  + K G   D+ + TA+++ + +      
Sbjct: 217 EGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLD 276

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A++ F  M  R+   W+  I A++  G  + A  ++     + +   +     +LT  +
Sbjct: 277 SAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRT----SMLTGLA 332

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
             G ++    LF     IH   P +V +  M+    +  ++ EA DL   MP   N + W
Sbjct: 333 RYGRIDDAKILF---DQIH--EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-NTISW 386

Query: 645 GSLLAACQKH 654
             ++A   ++
Sbjct: 387 AGMIAGYARN 396



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 30/236 (12%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           N + L   KQ H   +K G     SY+   + T    G + S+   ++ FD     +  S
Sbjct: 430 NIEALETGKQVHSLAVKAGCQFN-SYVCNALITL--YGKYRSIGSVRQIFDRMTVKDTVS 486

Query: 101 ATLFM--------------------------YNSLIRGYSCIGLGVEAISLYVELAGFGI 134
              FM                          + ++I   +    G EA+ ++  +     
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           LP+      +L       A   G Q+H   +K+G D  + V N L++ Y +C    D  +
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLK 605

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           VFD M ER++ +W ++I   A+  L +EA+ ++  MV  G+ PN VT V ++ AC+
Sbjct: 606 VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACS 661



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 22/224 (9%)

Query: 7   PSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHK--- 63
           PSP V++  T+ +   Q       + + ++   ++     EL  P    +  GL      
Sbjct: 511 PSPDVVSWTTIISACAQ-----ADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGA 565

Query: 64  PSYISKVVCTCAQMGTFESLTYAQKAFDYYIK----------DNETSATLFMYNSLIRGY 113
           P    ++     ++G    L  A      Y K          D+     +F +N++I GY
Sbjct: 566 PQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLKVFDSMEERDIFTWNTIITGY 625

Query: 114 SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDV 173
           +  GLG EAI +Y  +   G+LP++ TF  +L+AC+ S    EG Q   ++    +    
Sbjct: 626 AQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSS-DYGLTP 684

Query: 174 FVEN--CLINFYGECGDIVDGRR-VFDEMSERNVVSWTSLICAC 214
            +E+  C+++  G  GD+      ++D   E + V W++L+ AC
Sbjct: 685 LLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGAC 728


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 253/688 (36%), Positives = 389/688 (56%), Gaps = 34/688 (4%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+H  I+  G   + F+ N L+N Y  CG + D +++F     +NVVSWT LI   A+ D
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKND 101

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
              EA+ +F EM+    KPN+VT+  V+ A A L  + +   V  +    G + N  +  
Sbjct: 102 CFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           ALVDMY K G +  A+QLF    +RN+V  N I+S Y   G + EA+ + + M   G   
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D  T++S + AS  +G L  G   HG+++R G E    I   ++D+Y             
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY------------- 268

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                   VS N           V+ A  VFSEM  +D  +W  ML G +    ++ A++
Sbjct: 269 --------VSHNC----------VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIK 310

Query: 459 LFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            F  ML  + +K+D + ++G+ S+C + GAL   + ++A   K     ++ + +A++DM+
Sbjct: 311 HFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMY 370

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A CG+ + A + F  M ++DV  W A I    M G G  A++LF +M   G+ PD   FV
Sbjct: 371 ANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFV 430

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL ACSH G+V +G  +F  M     V P + HY C++D+LGRAG L  A   I +MP 
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPF 490

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           +P+  ++ +LL AC+ H N+ +    +++I E++P  +G +VLLSN+YA AG W  V   
Sbjct: 491 QPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMT 550

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  ++ + ++K PG SSIE+N +++ F +G++ HP+   I  +L+ +  +++ AGYVP+ 
Sbjct: 551 RASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPN- 609

Query: 758 TNVLL-DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           TNVLL DV +  KK +L HHSEK+A+AFGL+ T     IR+ KNLR C DCH+ +K VSK
Sbjct: 610 TNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSK 669

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           V+ R ++++D NRFH F+ G CSC D+W
Sbjct: 670 VFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 243/545 (44%), Gaps = 20/545 (3%)

Query: 20  LTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGT 79
           L++    + +P   P    L+  K L  L+Q H  I+  GL H     + ++      G 
Sbjct: 12  LSSNPTQRLSPLAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGL 71

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
              L  A++ F +    N  S T+     LI G +     VEAI ++ E+      P+  
Sbjct: 72  ---LADAKQIFHHTPYKNVVSWTI-----LISGLAKNDCFVEAIDVFREMIMGNFKPNAV 123

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   VL A            VH   V+ GF+ +VFVE  L++ Y + G +   R++F+ M
Sbjct: 124 TISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESM 183

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           SERNVV+W +++   +     +EA+ LF  M  +G+  +  T++ +I A   +  L++G 
Sbjct: 184 SERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGT 243

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            +  +I   G + +  +  AL+D+Y+    VD A ++F E   +++     +++ +    
Sbjct: 244 GIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGR 303

Query: 320 LAREALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
               A+   ++ML +   + D + ++  +S+ +  G L  GR  H   ++        + 
Sbjct: 304 HWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVG 363

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR--- 435
           + +IDMY  CG  E A R F  M  K VV WN++IAG   NG    A ++F +M G    
Sbjct: 364 SAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLD 423

Query: 436 -DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG-VASACGYLGALDLAKW 493
            D  ++ ++L   +   M  E +++F  M+     +  +     V    G  G LD A  
Sbjct: 424 PDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAA-- 481

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR---MEKRDVSAWTAAIGAMAM 550
            Y++I       D  + + L+      G+ +   ++ ++   ME  D   +       A+
Sbjct: 482 -YSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYAL 540

Query: 551 EGNGE 555
            GN E
Sbjct: 541 AGNWE 545


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 285/817 (34%), Positives = 434/817 (53%), Gaps = 64/817 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCT----CAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           KQ H H+ K G G     ++  +      C   G         K FD   + N+ S    
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA------VYKVFDRISERNQVS---- 166

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK---SSAFGEGVQVH 161
            +NSLI           A+  +  +    + P  FT   V+ AC+          G QVH
Sbjct: 167 -WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
              ++ G + + F+ N L+  YG+ G +   + +      R++V+W +++ +  + +   
Sbjct: 226 AYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 284

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNAL 280
           EA+    EMV EG++P+  T+  V+ AC+ L+ L  G  + AY  + G +  N+ + +AL
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPD 339
           VDMY  C  V + +++F    DR + L N +++ Y +    +EAL +   M    G   +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             TM   V A  + G        HG+V++ GL+    + NT++DMY + GK ++A RIF 
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF- 463

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                          +M  RD ++WNTM+ G       E+A+ L
Sbjct: 464 ------------------------------GKMEDRDLVTWNTMITGYVFSEHHEDALLL 493

Query: 460 FRVMLS-ER----------IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
              M + ER          +K + +T++ +  +C  L AL   K I+AY  KN +  D+ 
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           + +ALVDM+A+CG  Q + +VF ++ +++V  W   I A  M GNG++A++L   M+ QG
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           +KP+ + F+ V  ACSH G+V++G  +F  M   +GV P   HY C+VDLLGRAG + EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673

Query: 629 LDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
             L+  MP + N    W SLL A + H N++I   AA+ + +L+P  +  +VLL+NIY+S
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
           AG W     VR  MKEQG+RK PG S IE   +VH+F +GD SHP+   +S  L  +  R
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +R  GYVPD + VL +V+E EK+ LL  HSEKLA+AFG+++TS    IRV KNLR+C DC
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H   K +SK+ DREII+RD  RFH F+ G+CSC D+W
Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 186/646 (28%), Positives = 299/646 (46%), Gaps = 86/646 (13%)

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
           HK  Y+ +   T A      +++ A   F    +  E       +  L+R      L  E
Sbjct: 27  HKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPE------WWIDLLRSKVRSNLLRE 80

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD-VFVENCLI 180
           A+  YV++   GI PD + FP +L A         G Q+H  + K G+  D V V N L+
Sbjct: 81  AVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLV 140

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           N Y +CGD     +VFD +SERN VSW SLI +    +  + A+  F  M++E ++P+S 
Sbjct: 141 NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSF 200

Query: 241 TMVCVISACAKL---QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           T+V V++AC+ L   + L +G +V AY    G + N+ ++N LV MY K G + ++K L 
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLL 259

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
           G    R+LV  NT++S+  +     EAL  L EM+L G  PD  T+ S + A + L  L 
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319

Query: 358 CGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
            G+  H Y L+NG L+    + + ++DMY  C +     R+FD M ++ +  WN++IAG 
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            +N   + A  +F  M                     EE+  L           +  TM 
Sbjct: 380 SQNEHDKEALLLFIGM---------------------EESAGLL---------ANSTTMA 409

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
           GV  AC   GA    + I+ ++ K G+  D  +   L+DM++R G    AM++F +ME R
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEML-----------RQGIKPDSIVFVGVLTACSH 585
           D+  W   I       + E A+ L ++M            R  +KP+SI  + +L +C+ 
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529

Query: 586 GGLVNQGWHLF---------------RSMTDIHGVS-------------PQ--IVHYGCM 615
              + +G  +                 ++ D++                PQ  ++ +  +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589

Query: 616 VDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQKHQNVD 658
           +   G  G   EA+DL++ M V+   PN+V + S+ AAC     VD
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 202/402 (50%), Gaps = 35/402 (8%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV----CTCAQMGTFESLTYAQKA 89
           P+   L+  +T  EL   H + LK G   + S++   +    C C Q+ +       ++ 
Sbjct: 310 PACSHLEMLRTGKEL---HAYALKNGSLDENSFVGSALVDMYCNCKQVLS------GRRV 360

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNAC 148
           FD           + ++N++I GYS      EA+ L++ +    G+L +  T   V+ AC
Sbjct: 361 FDGMFDRK-----IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
            +S AF     +HG +VK G DRD FV+N L++ Y   G I    R+F +M +R++V+W 
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475

Query: 209 SLICACARRDLPKEAVYLFFEM------VEEG-----IKPNSVTMVCVISACAKLQNLEL 257
           ++I      +  ++A+ L  +M      V +G     +KPNS+T++ ++ +CA L  L  
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G  + AY  +  +  +  + +ALVDMY KCG +  ++++F +   +N++  N I+  Y  
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWD 375
            G  +EA+ +L  M++ G +P+ VT +S  +A +  G +  G     YV++   G+E   
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSS 654

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSN--KTVVSWNSLIAG 415
                ++D+  + G+ + A ++ + M        +W+SL+  
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/740 (36%), Positives = 414/740 (55%), Gaps = 32/740 (4%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           N L+  +S      EA++L++ L   G   D  +   VL  C        G QVH   +K
Sbjct: 61  NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            GF  DV V   L++ Y +   + DG RVFDEM  +NVVSWTSL+    +  L ++A+ L
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F +M  EGIKPN  T   V+   A    +E G +V   + + G+ +   + N++V+MY K
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
              V  AK +F   ++RN V  N++++ +V  GL  EA  +   M L G +  +    + 
Sbjct: 241 SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN-KT 405
           +   A + ++   +  H  V++NG +   +I   ++  Y KC + + A ++F  M   + 
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN 360

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           VVSW ++I+G ++NG  + A  +F +M                                 
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQM------------------------------RRE 390

Query: 466 ERIKVDRVTMVGVASACGY-LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           E ++ +  T   V +AC     +++  K  ++   K+G    + +++ALV M+A+ G+ +
Sbjct: 391 EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIE 450

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A +VF+R   RD+ +W + I   A  G G++++++F EM  + ++ D I F+GV++AC+
Sbjct: 451 SANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACT 510

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLVN+G   F  M   + + P + HY CMVDL  RAG+L +A+DLI  MP      IW
Sbjct: 511 HAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIW 570

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LLAAC+ H NV +   AAE++  L P+ S  +VLLSNIYA+AG W   A+VR  M  +
Sbjct: 571 RTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMK 630

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
            ++K  G S IEV  K   F +GD SHP+ + I   L E++ RL+DAGY PD   VL DV
Sbjct: 631 KVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDV 690

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           +E+ K+ +LS HSE+LA+AFGLI+T    PI++VKNLR+C DCH+  KL+SK+  R+I+V
Sbjct: 691 EEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVV 750

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD+NRFH F+ GSCSC D+W
Sbjct: 751 RDSNRFHHFKGGSCSCGDYW 770



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 232/510 (45%), Gaps = 50/510 (9%)

Query: 69  KVVCTCAQMGTFESLTYAQKAFDYYIK-----------DNETSATLFMYNSLIRGYSCIG 117
           +V C C + G  E ++      D Y+K           D      +  + SL+ GY   G
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172

Query: 118 LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
           L  +A+ L+ ++   GI P+ FTF  VL       A  +GVQVH  ++K G D  +FV N
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
            ++N Y +   + D + VFD M  RN VSW S+I       L  EA  LF+ M  EG+K 
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
                  VI  CA ++ +    ++   + + G   +  +  AL+  Y KC  +D A +LF
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352

Query: 298 GECKD-RNLVLCNTIMSNYVRLGLAREALAILDEMLL-HGPRPDRVTMLSAVSA-SAQLG 354
                 +N+V    I+S YV+ G    A+ +  +M    G  P+  T  S ++A +A   
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTA 412

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            +  G+  H   +++G      + + ++ MY K G  E A  +F    ++ +VSWNS+I+
Sbjct: 413 SVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMIS 472

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G  ++G  + + ++F EM                                S+ +++D +T
Sbjct: 473 GYAQHGCGKKSLKIFEEMR-------------------------------SKNLELDGIT 501

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
            +GV SAC + G ++  +  +  + K+  I   M+  + +VD+++R G  ++AM +  +M
Sbjct: 502 FIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561

Query: 534 E-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
                 + W   + A  +  N   GE A E
Sbjct: 562 PFPAGATIWRTLLAACRVHLNVQLGELAAE 591



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 16/265 (6%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           N K ++  KQ HC ++K G     +         A M  +   +    AF  +   +   
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLN------IKTALMVAYSKCSEIDDAFKLFCMMHGVQ 359

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGE-GV 158
             +  + ++I GY   G    A++L+ ++    G+ P++FTF  VLNAC   +A  E G 
Sbjct: 360 -NVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGK 418

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q H   +K GF   + V + L+  Y + G+I     VF    +R++VSW S+I   A+  
Sbjct: 419 QFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHG 478

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID----ELGMKANA 274
             K+++ +F EM  + ++ + +T + VISAC     +  G R   Y D    +  +    
Sbjct: 479 CGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQR---YFDLMVKDYHIVPTM 535

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGE 299
              + +VD+Y + G ++ A  L  +
Sbjct: 536 EHYSCMVDLYSRAGMLEKAMDLINK 560


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 285/817 (34%), Positives = 434/817 (53%), Gaps = 64/817 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCT----CAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           KQ H H+ K G G     ++  +      C   G         K FD   + N+ S    
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA------VYKVFDRISERNQVS---- 166

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK---SSAFGEGVQVH 161
            +NSLI           A+  +  +    + P  FT   V+ AC+          G QVH
Sbjct: 167 -WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
              ++ G + + F+ N L+  YG+ G +   + +      R++V+W +++ +  + +   
Sbjct: 226 AYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 284

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNAL 280
           EA+    EMV EG++P+  T+  V+ AC+ L+ L  G  + AY  + G +  N+ + +AL
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPD 339
           VDMY  C  V + +++F    DR + L N +++ Y +    +EAL +   M    G   +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             TM   V A  + G        HG+V++ GL+    + NT++DMY + GK ++A RIF 
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF- 463

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                          +M  RD ++WNTM+ G       E+A+ L
Sbjct: 464 ------------------------------GKMEDRDLVTWNTMITGYVFSEHHEDALLL 493

Query: 460 FRVMLS-ER----------IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
              M + ER          +K + +T++ +  +C  L AL   K I+AY  KN +  D+ 
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           + +ALVDM+A+CG  Q + +VF ++ +++V  W   I A  M GNG++A++L   M+ QG
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           +KP+ + F+ V  ACSH G+V++G  +F  M   +GV P   HY C+VDLLGRAG + EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673

Query: 629 LDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
             L+  MP + N    W SLL A + H N++I   AA+ + +L+P  +  +VLL+NIY+S
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
           AG W     VR  MKEQG+RK PG S IE   +VH+F +GD SHP+   +S  L  +  R
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +R  GYVPD + VL +V+E EK+ LL  HSEKLA+AFG+++TS    IRV KNLR+C DC
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H   K +SK+ DREII+RD  RFH F+ G+CSC D+W
Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 186/646 (28%), Positives = 299/646 (46%), Gaps = 86/646 (13%)

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
           HK  Y+ +   T A      +++ A   F    +  E       +  L+R      L  E
Sbjct: 27  HKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPE------WWIDLLRSKVRSNLLRE 80

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD-VFVENCLI 180
           A+  YV++   GI PD + FP +L A         G Q+H  + K G+  D V V N L+
Sbjct: 81  AVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLV 140

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           N Y +CGD     +VFD +SERN VSW SLI +    +  + A+  F  M++E ++P+S 
Sbjct: 141 NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSF 200

Query: 241 TMVCVISACAKL---QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           T+V V++AC+ L   + L +G +V AY    G + N+ ++N LV MY K G + ++K L 
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLL 259

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
           G    R+LV  NT++S+  +     EAL  L EM+L G  PD  T+ S + A + L  L 
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319

Query: 358 CGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
            G+  H Y L+NG L+    + + ++DMY  C +     R+FD M ++ +  WN++IAG 
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            +N   + A  +F  M                     EE+  L           +  TM 
Sbjct: 380 SQNEHDKEALLLFIGM---------------------EESAGLL---------ANSTTMA 409

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
           GV  AC   GA    + I+ ++ K G+  D  +   L+DM++R G    AM++F +ME R
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEML-----------RQGIKPDSIVFVGVLTACSH 585
           D+  W   I       + E A+ L ++M            R  +KP+SI  + +L +C+ 
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529

Query: 586 GGLVNQGWHLF---------------RSMTDIHGVS-------------PQ--IVHYGCM 615
              + +G  +                 ++ D++                PQ  ++ +  +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589

Query: 616 VDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQKHQNVD 658
           +   G  G   EA+DL++ M V+   PN+V + S+ AAC     VD
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 202/402 (50%), Gaps = 35/402 (8%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV----CTCAQMGTFESLTYAQKA 89
           P+   L+  +T  EL   H + LK G   + S++   +    C C Q+ +       ++ 
Sbjct: 310 PACSHLEMLRTGKEL---HAYALKNGSLDENSFVGSALVDMYCNCKQVLS------GRRV 360

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNAC 148
           FD           + ++N++I GYS      EA+ L++ +    G+L +  T   V+ AC
Sbjct: 361 FDGMFDRK-----IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
            +S AF     +HG +VK G DRD FV+N L++ Y   G I    R+F +M +R++V+W 
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475

Query: 209 SLICACARRDLPKEAVYLFFEM------VEEG-----IKPNSVTMVCVISACAKLQNLEL 257
           ++I      +  ++A+ L  +M      V +G     +KPNS+T++ ++ +CA L  L  
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G  + AY  +  +  +  + +ALVDMY KCG +  ++++F +   +N++  N I+  Y  
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWD 375
            G  +EA+ +L  M++ G +P+ VT +S  +A +  G +  G     YV++   G+E   
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSS 654

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSN--KTVVSWNSLIAG 415
                ++D+  + G+ + A ++ + M        +W+SL+  
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/593 (42%), Positives = 363/593 (61%), Gaps = 9/593 (1%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            V A +  LG+  ++ ++N ++      G  + + ++F + K+ N+ L NT++   V   
Sbjct: 28  HVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLND 87

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
             +E++ I   M   G  PD  T    + A A+L D   G   HG V++ G E  D+  N
Sbjct: 88  SFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCES-DAFVN 146

Query: 380 T-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE-------VFSE 431
           T ++ +Y KCG  + A ++FD +  K V +W ++I+G I  G    A +       VF  
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           M  +D +SW++M+ G     + +EA++LF  ML+E  + D   MVGV  AC  LGAL+L 
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
            W    +++N    +  L TAL+DM+A+CG    A +VFR M K+D+  W AAI  +AM 
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G+ + A  LF +M + GI+PD   FVG+L AC+H GLV++G   F SM  +  ++P+I H
Sbjct: 327 GHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEH 386

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           YGCMVDLLGRAG L EA  L+KSMP+E N ++WG+LL  C+ H++  +     +++  L+
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALE 446

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           P  SG +VLLSNIY+++ KW + A++R  M E+GI+K+PG S IEV+G VHEF  GD SH
Sbjct: 447 PSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSH 506

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
           P    I + L E+   L+ +GYVP    VL D++E+EK++ +  HSEKLA+AFGLIST+ 
Sbjct: 507 PLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAP 566

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              IRVVKNLR+C DCH   K +S+   REIIVRDNNRFH F  GSCSC D+W
Sbjct: 567 NDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 198/433 (45%), Gaps = 56/433 (12%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +L  LK  H  +L+ GL      ++KV+          S  +    + + I        +
Sbjct: 22  SLKHLKHVHAALLRLGLDEDSYLLNKVLRF--------SFNFGNTNYSHRIFHQTKEPNI 73

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F++N++I G        E+I +Y  +   G+ PD FTFPF+L AC +      G+++HG 
Sbjct: 74  FLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGL 133

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV------------------- 204
           +VK G + D FV   L++ YG+CG I +  +VFD++ E+NV                   
Sbjct: 134 VVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREA 193

Query: 205 -------------------VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
                              VSW+S+I   A   LPKEA+ LFF+M+ EG +P+   MV V
Sbjct: 194 IDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGV 253

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           + ACA+L  LELG+     +D      N ++  AL+DMY KCG +D+A ++F   + +++
Sbjct: 254 LCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDI 313

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR----- 360
           V+ N  +S     G  + A  +  +M   G  PD  T +  + A    G +  GR     
Sbjct: 314 VVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNS 373

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKN 419
           M   + L   +E +      M+D+  + G  + A ++   M      + W +L+ G   +
Sbjct: 374 MERVFTLTPEIEHY----GCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLH 429

Query: 420 GDVESAREVFSEM 432
            D +    V  ++
Sbjct: 430 RDTQLVEGVLKQL 442



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/175 (19%), Positives = 82/175 (46%), Gaps = 20/175 (11%)

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
             +L   K ++A + + G+  D  L   ++      G+   + ++F + ++ ++  +   
Sbjct: 20  FNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTM 79

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I  + +  + ++++E+++ M ++G+ PDS  F  +L AC+   L++      +    +HG
Sbjct: 80  IHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACAR--LLDS-----KLGIKLHG 132

Query: 605 VSPQIVHYGC---------MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +   +V  GC         +V L G+ G +  A  +   +P E N   W ++++ 
Sbjct: 133 L---VVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISG 183


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/724 (37%), Positives = 400/724 (55%), Gaps = 33/724 (4%)

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A++ +V ++  G  P   TF  +L  C        G  VH  +   G D +      L N
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSV 240
            Y +C    D RRVFD M  R+ V+W +L+   AR  L + A+ +   M EE G +P+S+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T+V V+ ACA  + L       A+    G++    +  A++D Y KCG +  A+ +F   
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
             +N V  N ++  Y + G +REALA+ + M+  G     V++L+A+ A  +LG L  G 
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H  ++R GL+   S+ N +I MY KC +                              
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKR------------------------------ 312

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
            V+ A  VF E+  R  +SWN M+ G  Q    E+A+ LF  M  E +K D  T+V V  
Sbjct: 313 -VDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIP 371

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           A   +     A+WI+ Y  +  +  D+ + TAL+DM+A+CG    A  +F    +R V  
Sbjct: 372 ALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT 431

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W A I      G G+ AVELF EM   GI P+   F+ VL+ACSH GLV++G   F SM 
Sbjct: 432 WNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMK 491

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           + +G+ P + HYG MVDLLGRAG L EA   I+ MP++P   ++G++L AC+ H+NV++A
Sbjct: 492 EDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELA 551

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
             +A++I EL P++   HVLL+NIYA+A  W +VARVR  M++ G++K PG S I++  +
Sbjct: 552 EESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNE 611

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           +H F SG  +H +   I S L ++   ++  GYVPD T+ + DV++  K  LL+ HSEKL
Sbjct: 612 IHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKL 670

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+AFGLI T+    I++ KNLR+C DCH+  KL+S V  REII+RD  RFH F+ G CSC
Sbjct: 671 AIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSC 730

Query: 841 SDFW 844
            D+W
Sbjct: 731 GDYW 734



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 214/485 (44%), Gaps = 70/485 (14%)

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           L  + AR DLP  A+  F  M   G  P   T   ++  CA   +L  G  V A +   G
Sbjct: 31  LRASAARSDLPA-ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARG 89

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           + + AL   AL +MY KC     A+++F     R+ V  N +++ Y R GLAR A+ ++ 
Sbjct: 90  IDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVV 149

Query: 330 EML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            M    G RPD +T++S + A A    L   R  H + +R+GLE   ++   ++D Y KC
Sbjct: 150 RMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC 209

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G    A  +FD M  K  VSWN++I G  +NGD                           
Sbjct: 210 GDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS-------------------------- 243

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
                 EA+ LF  M+ E + V  V+++    ACG LG LD    ++  + + G+  ++ 
Sbjct: 244 -----REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS 298

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +  AL+ M+++C     A  VF  +++R   +W A I   A  G  E AV LF  M  + 
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358

Query: 569 IKPDSIVFVGVLTACS-----------HG------------------------GLVNQGW 593
           +KPDS   V V+ A +           HG                        G VN   
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
            LF S  + H ++   + +G      G+A +  E  + +KS+ + PN+  + S+L+AC  
Sbjct: 419 ILFNSARERHVITWNAMIHGYGSHGFGKAAV--ELFEEMKSIGIVPNETTFLSVLSACSH 476

Query: 654 HQNVD 658
              VD
Sbjct: 477 AGLVD 481



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 191/394 (48%), Gaps = 22/394 (5%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           + H   ++ GL    +  + ++    + G   +   A+  FD+    N  S     +N++
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRA---ARVVFDWMPTKNSVS-----WNAM 233

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           I GY+  G   EA++L+  +   G+     +    L AC +     EG++VH  +V++G 
Sbjct: 234 IDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGL 293

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           D +V V N LI  Y +C  +     VFDE+  R  VSW ++I  CA+    ++AV LF  
Sbjct: 294 DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTR 353

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M  E +KP+S T+V VI A A + +      +  Y   L +  +  ++ AL+DMY KCG 
Sbjct: 354 MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           V+ A+ LF   ++R+++  N ++  Y   G  + A+ + +EM   G  P+  T LS +SA
Sbjct: 414 VNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473

Query: 350 SAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            +  G +  GR     M   Y L  G+E +     TM+D+  + GK + A      M   
Sbjct: 474 CSHAGLVDEGREYFTSMKEDYGLEPGMEHY----GTMVDLLGRAGKLDEAWAFIQKMPMD 529

Query: 405 TVVSWNSLIAG---LIKNGDV--ESAREVFSEMP 433
             +S    + G   L KN ++  ESA+++F   P
Sbjct: 530 PGLSVYGAMLGACKLHKNVELAEESAQKIFELGP 563


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/724 (37%), Positives = 400/724 (55%), Gaps = 33/724 (4%)

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A++ +V ++  G  P   TF  +L  C        G  VH  +   G D +      L N
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSV 240
            Y +C    D RRVFD M  R+ V+W +L+   AR  L + A+ +   M EE G +P+S+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T+V V+ ACA  + L       A+    G++    +  A++D Y KCG +  A+ +F   
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
             +N V  N ++  Y + G +REALA+ + M+  G     V++L+A+ A  +LG L  G 
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H  ++R GL+   S+ N +I MY KC +                              
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKR------------------------------ 312

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
            V+ A  VF E+  R  +SWN M+ G  Q    E+A+ LF  M  E +K D  T+V V  
Sbjct: 313 -VDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIP 371

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           A   +     A+WI+ Y  +  +  D+ + TAL+DM+A+CG    A  +F    +R V  
Sbjct: 372 ALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT 431

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W A I      G G+ AVELF EM   GI P+   F+ VL+ACSH GLV++G   F SM 
Sbjct: 432 WNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMK 491

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           + +G+ P + HYG MVDLLGRAG L EA   I+ MP++P   ++G++L AC+ H+NV++A
Sbjct: 492 EDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELA 551

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
             +A++I EL P++   HVLL+NIYA+A  W +VARVR  M++ G++K PG S I++  +
Sbjct: 552 EESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNE 611

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           +H F SG  +H +   I S L ++   ++  GYVPD T+ + DV++  K  LL+ HSEKL
Sbjct: 612 IHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKL 670

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+AFGLI T+    I++ KNLR+C DCH+  KL+S V  REII+RD  RFH F+ G CSC
Sbjct: 671 AIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSC 730

Query: 841 SDFW 844
            D+W
Sbjct: 731 GDYW 734



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 210/477 (44%), Gaps = 70/477 (14%)

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           DLP  A+  F  M   G  P   T   ++  CA   +L  G  V A +   G+ + AL  
Sbjct: 39  DLPA-ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAA 97

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML-LHGP 336
            AL +MY KC     A+++F     R+ V  N +++ Y R GLAR A+ ++  M    G 
Sbjct: 98  TALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE 157

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           RPD +T++S + A A    L   R  H + +R+GLE   ++   ++D Y KCG    A  
Sbjct: 158 RPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +FD M  K  VSWN++I G  +NGD                                 EA
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDS-------------------------------REA 246

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + LF  M+ E + V  V+++    ACG LG LD    ++  + + G+  ++ +  AL+ M
Sbjct: 247 LALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITM 306

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +++C     A  VF  +++R   +W A I   A  G  E AV LF  M  + +KPDS   
Sbjct: 307 YSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTL 366

Query: 577 VGVLTACS-----------HG------------------------GLVNQGWHLFRSMTD 601
           V V+ A +           HG                        G VN    LF S  +
Sbjct: 367 VSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARE 426

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
            H ++   + +G      G+A +  E  + +KS+ + PN+  + S+L+AC     VD
Sbjct: 427 RHVITWNAMIHGYGSHGFGKAAV--ELFEEMKSIGIVPNETTFLSVLSACSHAGLVD 481



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 191/394 (48%), Gaps = 22/394 (5%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           + H   ++ GL    +  + ++    + G   +   A+  FD+    N  S     +N++
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRA---ARVVFDWMPTKNSVS-----WNAM 233

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           I GY+  G   EA++L+  +   G+     +    L AC +     EG++VH  +V++G 
Sbjct: 234 IDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGL 293

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           D +V V N LI  Y +C  +     VFDE+  R  VSW ++I  CA+    ++AV LF  
Sbjct: 294 DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTR 353

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M  E +KP+S T+V VI A A + +      +  Y   L +  +  ++ AL+DMY KCG 
Sbjct: 354 MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           V+ A+ LF   ++R+++  N ++  Y   G  + A+ + +EM   G  P+  T LS +SA
Sbjct: 414 VNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473

Query: 350 SAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            +  G +  GR     M   Y L  G+E +     TM+D+  + GK + A      M   
Sbjct: 474 CSHAGLVDEGREYFTSMKEDYGLEPGMEHY----GTMVDLLGRAGKLDEAWAFIQKMPMD 529

Query: 405 TVVSWNSLIAG---LIKNGDV--ESAREVFSEMP 433
             +S    + G   L KN ++  ESA+++F   P
Sbjct: 530 PGLSVYGAMLGACKLHKNVELAEESAQKIFELGP 563


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 285/814 (35%), Positives = 437/814 (53%), Gaps = 58/814 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQM-GTFESLTYAQKAFDYYIKDNETSATLFMYN 107
           KQ H H+ K G G     ++  +    +  G F ++    K FD   + N+ S     +N
Sbjct: 30  KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV---YKVFDRISERNQVS-----WN 81

Query: 108 SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK---SSAFGEGVQVHGAI 164
           SLI           A+  +  +    + P  FT   V+ AC+          G QVH   
Sbjct: 82  SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 141

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           ++ G + + F+ N L+  YG+ G +   + +      R++V+W +++ +  + +   EA+
Sbjct: 142 LRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 200

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNALVDM 283
               EMV EG++P+  T+  V+ AC+ L+ L  G  + AY  + G +  N+ + +ALVDM
Sbjct: 201 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 260

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVT 342
           Y  C  V + +++F    DR + L N +++ Y +    +EAL +   M    G   +  T
Sbjct: 261 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 320

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M   V A  + G        HG+V++ GL+    + NT++DMY + GK ++A RIF    
Sbjct: 321 MAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF---- 376

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                                       +M  RD ++WNTM+ G       E+A+ L   
Sbjct: 377 ---------------------------GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 409

Query: 463 MLS-ER----------IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
           M + ER          +K + +T++ +  +C  L AL   K I+AY  KN +  D+ + +
Sbjct: 410 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 469

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           ALVDM+A+CG  Q + +VF ++ +++V  W   I A  M GNG++A++L   M+ QG+KP
Sbjct: 470 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 529

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           + + F+ V  ACSH G+V++G  +F  M   +GV P   HY C+VDLLGRAG + EA  L
Sbjct: 530 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 589

Query: 632 IKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           +  MP + N    W SLL A + H N++I   AA+ + +L+P  +  +VLL+NIY+SAG 
Sbjct: 590 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 649

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W     VR  MKEQG+RK PG S IE   +VH+F +GD SHP+   +S  L  +  R+R 
Sbjct: 650 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 709

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            GYVPD + VL +V+E EK+ LL  HSEKLA+AFG+++TS    IRV KNLR+C DCH  
Sbjct: 710 EGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLA 769

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +SK+ DREII+RD  RFH F+ G+CSC D+W
Sbjct: 770 TKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 171/576 (29%), Positives = 273/576 (47%), Gaps = 80/576 (13%)

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD-VFVENCLINFYGECGDIV 190
            GI PD + FP +L A         G Q+H  + K G+  D V V N L+N Y +CGD  
Sbjct: 4   LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
              +VFD +SERN VSW SLI +    +  + A+  F  M++E ++P+S T+V V++AC+
Sbjct: 64  AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123

Query: 251 KL---QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
            L   + L +G +V AY    G + N+ ++N LV MY K G + ++K L G    R+LV 
Sbjct: 124 NLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            NT++S+  +     EAL  L EM+L G  PD  T+ S + A + L  L  G+  H Y L
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242

Query: 368 RNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           +NG L+    + + ++DMY  C +     R+FD M ++ +  WN++IAG  +N   + A 
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
            +F  M                     EE+  L           +  TM GV  AC   G
Sbjct: 303 LLFIGM---------------------EESAGLL---------ANSTTMAGVVPACVRSG 332

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
           A    + I+ ++ K G+  D  +   L+DM++R G    AM++F +ME RD+  W   I 
Sbjct: 333 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 392

Query: 547 AMAMEGNGEQAVELFNEML-----------RQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
                 + E A+ L ++M            R  +KP+SI  + +L +C+    + +G  +
Sbjct: 393 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 452

Query: 596 F---------------RSMTDIHGVS-------------PQ--IVHYGCMVDLLGRAGLL 625
                            ++ D++                PQ  ++ +  ++   G  G  
Sbjct: 453 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 512

Query: 626 GEALDLIKSMPVE---PNDVIWGSLLAACQKHQNVD 658
            EA+DL++ M V+   PN+V + S+ AAC     VD
Sbjct: 513 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 548



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 202/402 (50%), Gaps = 35/402 (8%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV----CTCAQMGTFESLTYAQKA 89
           P+   L+  +T  EL   H + LK G   + S++   +    C C Q+ +       ++ 
Sbjct: 223 PACSHLEMLRTGKEL---HAYALKNGSLDENSFVGSALVDMYCNCKQVLS------GRRV 273

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNAC 148
           FD           + ++N++I GYS      EA+ L++ +    G+L +  T   V+ AC
Sbjct: 274 FDGMF-----DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 328

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
            +S AF     +HG +VK G DRD FV+N L++ Y   G I    R+F +M +R++V+W 
Sbjct: 329 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 388

Query: 209 SLICACARRDLPKEAVYLFFEM------VEEG-----IKPNSVTMVCVISACAKLQNLEL 257
           ++I      +  ++A+ L  +M      V +G     +KPNS+T++ ++ +CA L  L  
Sbjct: 389 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 448

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G  + AY  +  +  +  + +ALVDMY KCG +  ++++F +   +N++  N I+  Y  
Sbjct: 449 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 508

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWD 375
            G  +EA+ +L  M++ G +P+ VT +S  +A +  G +  G     YV++   G+E   
Sbjct: 509 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSS 567

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSN--KTVVSWNSLIAG 415
                ++D+  + G+ + A ++ + M        +W+SL+  
Sbjct: 568 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 609



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 195/437 (44%), Gaps = 60/437 (13%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NALVDMYMKCG 288
           M+  GIKP++     ++ A A LQ++ELG ++ A++ + G   +++ V N LV++Y KCG
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
                 ++F    +RN V  N+++S+         AL     ML     P   T++S V+
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 349 ASAQLG---DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
           A + L     L+ G+  H Y LR G E    I NT++ MY K GK   +  +      + 
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +V+WN++++ L +N                              E +  EA+E  R M+ 
Sbjct: 180 LVTWNTVLSSLCQN------------------------------EQLL-EALEYLREMVL 208

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQ 524
           E ++ D  T+  V  AC +L  L   K ++AY  KNG +  +  + +ALVDM+  C    
Sbjct: 209 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 268

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ-GIKPDSIVFVGVLTAC 583
              +VF  M  R +  W A I   +   + ++A+ LF  M    G+  +S    GV+ AC
Sbjct: 269 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 328

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYG---------CMVDLLGRAGLLGEALDLIKS 634
              G        F     IHG    +V  G          ++D+  R G +  A+ +   
Sbjct: 329 VRSG-------AFSRKEAIHGF---VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 378

Query: 635 MPVEPNDVI-WGSLLAA 650
           M  E  D++ W +++  
Sbjct: 379 M--EDRDLVTWNTMITG 393


>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/547 (44%), Positives = 347/547 (63%), Gaps = 9/547 (1%)

Query: 307 LCNTIMSNYVR-----LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           L NT++  +V+      G     ++I   M  HG +PD  T    + + A    L  GR 
Sbjct: 26  LWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRS 85

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H  +LR GL     +  ++I MY  CG    A ++FD +    + SWNS+I    + G 
Sbjct: 86  VHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGL 145

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML---SERIKVDRVTMVGV 478
           V+ AR +F+ MP R+ ISW+ M+ G  +   ++EA+ LFR M       ++ +  TM GV
Sbjct: 146 VDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGV 205

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRD 537
            +ACG LGAL+  KW +AYI+K G+  D+ L TAL+DM+A+CG  ++A  VF  +   +D
Sbjct: 206 LAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKD 265

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           V AW+A I  +AM G  E+ V LF++M+ QG++P+++ F+ V  AC HGGLV++G    R
Sbjct: 266 VMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLR 325

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
            MT+ + + P I HYGCMVDL GRAG + EA +++KSMP+EP+ ++WG+LL+  + H ++
Sbjct: 326 RMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDI 385

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           +    A +++ EL+P  SG +VLLSN+YA  G+W +V  VR  M+  GI+K+PG S IEV
Sbjct: 386 ETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEV 445

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
            G +HEF  GD+SHPE   I  ML E+  RL+  GYV +   VLLD+DE+ K+  LS HS
Sbjct: 446 GGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHS 505

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           EKLA+A+G + TS   PIR+VKNLR+C DCH   K++SKV+DREIIVRD NRFH F QG 
Sbjct: 506 EKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGL 565

Query: 838 CSCSDFW 844
           CSC D+W
Sbjct: 566 CSCRDYW 572



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 178/367 (48%), Gaps = 50/367 (13%)

Query: 104 FMYNSLIRGY-----SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           F++N+LIR +        G     IS++V +   G+ PD  TFPF+L +    S    G 
Sbjct: 25  FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGR 84

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE-------------------- 198
            VH  I++ G   D FV+  LI+ Y  CG++   R+VFDE                    
Sbjct: 85  SVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAG 144

Query: 199 -----------MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG---IKPNSVTMVC 244
                      M ERNV+SW+ +I    R    KEA+ LF EM   G   ++PN  TM  
Sbjct: 145 LVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSG 204

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC-KDR 303
           V++AC +L  LE G    AYID+ GM  + ++  AL+DMY KCG+V+ A  +F     ++
Sbjct: 205 VLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNK 264

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG---- 359
           +++  + ++S     GLA E + +  +M+  G RP+ VT L+   A    G +  G    
Sbjct: 265 DVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYL 324

Query: 360 -RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLI 417
            RM   Y +   ++ +      M+D+Y + G+ + A  +   M     V+ W +L++G  
Sbjct: 325 RRMTEDYSIIPTIQHY----GCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSR 380

Query: 418 KNGDVES 424
            +GD+E+
Sbjct: 381 MHGDIET 387


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/700 (34%), Positives = 410/700 (58%), Gaps = 48/700 (6%)

Query: 177  NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
            N L+N Y +  ++    ++F+E+ + +V SWT LI   AR  L  + + LF +M ++G+ 
Sbjct: 325  NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384

Query: 237  PNSVTMVCVISACAK-LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
            PN  T+  V+ +C+  + +  +G  +  +I   G+  +A++ N+++D Y+KC     A++
Sbjct: 385  PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444

Query: 296  LFGECKDRNLVLCNTIMSNYVRLG-------------------------------LAREA 324
            LFG   +++ V  N +MS+Y+++G                                 R A
Sbjct: 445  LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504

Query: 325  LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
            L +L +M+  GP  +++T   A+  ++ L  L  G+  H  VL+ G+     + N++IDM
Sbjct: 505  LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDM 564

Query: 385  YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
            Y KCG+ E A  IF H+  ++           + N + ES  +   E      +SW++M+
Sbjct: 565  YCKCGEMEKASVIFKHLPQESS----------MMNSE-ESCDDAVVE-----SVSWSSMV 608

Query: 445  GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
             G  Q   FE+A++ F  M+  +++VD+ T+  V SAC   G L+L + ++ YI+K G  
Sbjct: 609  SGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHG 668

Query: 505  CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
             D+ L ++++DM+ +CG    A  +F + + R+V  WT+ I   A+ G G +AV LF  M
Sbjct: 669  LDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELM 728

Query: 565  LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
            + +GI P+ + FVGVLTACSH GL+ +G   FR M +++G+ P   H+ CMVDL GRAG 
Sbjct: 729  INEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGR 788

Query: 625  LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
            L E  + I +  +     +W S L++C+ H+N+++  +  +++ EL+P  +G ++L S+I
Sbjct: 789  LNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSI 848

Query: 685  YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
             A+  +W   A++R  M+++G++K P  S I++  +VH F  GD SHP+   I S L E+
Sbjct: 849  CATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDEL 908

Query: 745  NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
              RL++ GY  D+T V+ DV++++++ LL +HSEKLA+A+G+IST+   PIRV+KNLR+C
Sbjct: 909  IGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVC 968

Query: 805  CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             DCH+F K  S++  REII+RD +RFH F+ G CSC+D+W
Sbjct: 969  IDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 225/492 (45%), Gaps = 90/492 (18%)

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
           ++L  A K F+   + +     +F +  LI G++ IGL  + + L+ ++   G+ P++FT
Sbjct: 335 QNLEQAHKMFEEIPQTD-----VFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFT 389

Query: 141 FPFVLNACTKS---SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC----------- 186
              VL +C+ +   S  G+G+  HG I++ G D D  + N ++++Y +C           
Sbjct: 390 LSIVLKSCSSNVNDSRIGKGI--HGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFG 447

Query: 187 --------------------GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
                               GD+     +F ++  ++  SW ++I    R    + A+ L
Sbjct: 448 LMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALEL 507

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
            ++MV  G   N +T    +   + L  L LG ++   + ++G+  +  + N+L+DMY K
Sbjct: 508 LYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCK 567

Query: 287 CGAVDTAKQLFGE-------------CKDRNL--VLCNTIMSNYVRLGLAREALAILDEM 331
           CG ++ A  +F               C D  +  V  ++++S YV+ G   +AL     M
Sbjct: 568 CGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFM 627

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS-ICNTMIDMYMKCGK 390
           +      D+ T+ S VSA A  G L  GR  HGY+ + G  G D  + +++IDMY+KCG 
Sbjct: 628 ICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG-HGLDVFLGSSIIDMYVKCGS 686

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  IF+   ++ VV W S+I+G   +G             GR               
Sbjct: 687 LNDAWLIFNQAKDRNVVLWTSMISGCALHGQ------------GR--------------- 719

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQL 509
               EA+ LF +M++E I  + V+ VGV +AC + G L+   K+     E  GI    + 
Sbjct: 720 ----EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEH 775

Query: 510 ATALVDMFARCG 521
            T +VD++ R G
Sbjct: 776 FTCMVDLYGRAG 787



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 168/339 (49%), Gaps = 25/339 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I G    G    A+ L  ++   G   +K TF   L   +  S  G G Q+H  ++
Sbjct: 488 WNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVL 547

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV---------------VSWTSL 210
           K+G   D FV N LI+ Y +CG++     +F  + + +                VSW+S+
Sbjct: 548 KVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSM 607

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           +    +    ++A+  F  M+   ++ +  T+  V+SACA    LELG +V  YI ++G 
Sbjct: 608 VSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGH 667

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             +  + ++++DMY+KCG+++ A  +F + KDRN+VL  +++S     G  REA+ + + 
Sbjct: 668 GLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFEL 727

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMY 385
           M+  G  P+ V+ +  ++A +  G L  G      M   Y +R G E +      M+D+Y
Sbjct: 728 MINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHF----TCMVDLY 783

Query: 386 MKCGK-QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
            + G+  E+   I ++  +K    W S ++    + ++E
Sbjct: 784 GRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIE 822



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 8/256 (3%)

Query: 49  KQPHCHILKQGL---GHKPSYISKVVCTCAQMG----TFESLTYAQKAFDYYIKDNETSA 101
           KQ H  +LK G+   G   + +  + C C +M      F+ L       +     ++   
Sbjct: 540 KQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVV 599

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               ++S++ GY   G   +A+  +  +    +  DKFT   V++AC  +     G QVH
Sbjct: 600 ESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVH 659

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G I K+G   DVF+ + +I+ Y +CG + D   +F++  +RNVV WTS+I  CA     +
Sbjct: 660 GYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGR 719

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMVNAL 280
           EAV LF  M+ EGI PN V+ V V++AC+    LE G +    + E+ G++  A     +
Sbjct: 720 EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCM 779

Query: 281 VDMYMKCGAVDTAKQL 296
           VD+Y + G ++  K+ 
Sbjct: 780 VDLYGRAGRLNEIKEF 795


>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/571 (43%), Positives = 354/571 (61%), Gaps = 16/571 (2%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVS 348
           +D A+++F      N    NT++          +AL +  EM+      P+  T  S   
Sbjct: 61  LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFK 120

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF---------D 399
           A  +   L  GR  HG  ++ GL+  + + + ++ MY+ CG  E A R+F         D
Sbjct: 121 ACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD 180

Query: 400 HMSNKT------VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
            + +K       VV WN +I G ++ G++E AR +F EMP R  +SWN M+ G  Q   F
Sbjct: 181 GIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHF 240

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           +EA+E+FR M    +  + VT+V V  A   LGAL+L KW++ Y  +N I  D  L +AL
Sbjct: 241 KEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSAL 300

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +DM+A+CG  ++A+QVF  + KR+V  W+  I  +AM G  +  ++ F +M R G+ P  
Sbjct: 301 IDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSD 360

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           + ++G+L+ACSH GLVN+G   F  M  + G+ P+I HYGCMVDLLGRAGLL E+ +LI 
Sbjct: 361 VTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELIL 420

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           +MP++P+DVIW +LL AC+ H NV++    AE + EL P  SG +V LSNIYAS G W  
Sbjct: 421 NMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEG 480

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           VA+VRL MKE  +RK PG S IE++G +HEF   D+SHP+   I SML+EM+  L   GY
Sbjct: 481 VAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGY 540

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
            P+ T VL ++DE++K+  L++HSEK+A+AFGLIST    P+R+ KNLR+C DCHS  KL
Sbjct: 541 RPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKL 600

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +SK+Y R+IIVRD  RFH F  GSCSC D+W
Sbjct: 601 ISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 211/450 (46%), Gaps = 57/450 (12%)

Query: 28  TTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           TT    PS  S   CKT+ +LKQ H  ++K      P   ++++   A +     L YA+
Sbjct: 9   TTSLWPPS--SFFPCKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSA-VSDHRDLDYAR 65

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLN 146
           K F    + N      F YN+LIR  S      +A+ +++E+     + P+ FTFP V  
Sbjct: 66  KIFRSMHRPN-----CFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFK 120

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG------------------- 187
           AC ++    EG QVHG  VK G D D FV + ++  Y  CG                   
Sbjct: 121 ACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD 180

Query: 188 -----------DIV------DG----------RRVFDEMSERNVVSWTSLICACARRDLP 220
                      D+V      DG          R +FDEM +R+VVSW  +I   A+    
Sbjct: 181 GIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHF 240

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           KEAV +F EM    + PN VT+V V+ A ++L  LELG  V  Y     +  + ++ +AL
Sbjct: 241 KEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSAL 300

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           +DMY KCG+++ A Q+F     RN+V  +TI++     G A++ L   ++M   G  P  
Sbjct: 301 IDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSD 360

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           VT +  +SA +  G +  GR    +++R +GLE        M+D+  + G  E +  +  
Sbjct: 361 VTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELIL 420

Query: 400 HMSNKT-VVSWNSLIAGLIKNGDVESAREV 428
           +M  K   V W +L+     +G+VE  + V
Sbjct: 421 NMPIKPDDVIWKALLGACKMHGNVEMGKRV 450



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 203/448 (45%), Gaps = 82/448 (18%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  ++K    RD      L+ F    +  D+   R++F  M   N  S+ +LI A + 
Sbjct: 29  QLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSE 88

Query: 217 RDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
            + P +A+ +F EMVE+  ++PN  T   V  AC + + L  G +V     + G+ ++  
Sbjct: 89  SNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEF 148

Query: 276 MVNALVDMYMKCGA---------------------------------------------- 289
           +V+ +V MY+ CG                                               
Sbjct: 149 VVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGE 208

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           ++ A+ LF E   R++V  N +++ Y + G  +EA+ +  EM +    P+ VT++S + A
Sbjct: 209 LEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPA 268

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            ++LG L  G+  H Y +RN +   D + + +IDMY KCG  E A ++F+ +  + VV+W
Sbjct: 269 MSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTW 328

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           +++IAGL  +G  +   + F                         E ME   VM S+   
Sbjct: 329 STIIAGLAMHGRAKDTLDHF-------------------------EDMERAGVMPSD--- 360

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQ 528
              VT +G+ SAC + G ++  +W + ++ + +G+   ++    +VD+  R G  + + +
Sbjct: 361 ---VTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEE 417

Query: 529 VFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +   M  K D   W A +GA  M GN E
Sbjct: 418 LILNMPIKPDDVIWKALLGACKMHGNVE 445


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/631 (38%), Positives = 374/631 (59%), Gaps = 1/631 (0%)

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM-KAN 273
           +R   P+  + L+  +   G   +  +   ++ A +KL  L LG  +     + G   A+
Sbjct: 91  SRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHAD 150

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             + +AL+ MY  CG +  A+ LF +   R++V  N ++  Y +       L + +EM  
Sbjct: 151 PFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKT 210

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  PD + + + +SA A  G+L  G+  H ++  NG      I  ++++MY  CG   +
Sbjct: 211 SGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHL 270

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A  ++D + +K +V   ++++G  K G V+ AR +F  M  +D + W+ M+ G  +    
Sbjct: 271 AREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQP 330

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
            EA++LF  M   RI  D++TM+ V SAC  +GAL  AKWI+ Y +KNG    + +  AL
Sbjct: 331 LEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNAL 390

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +DM+A+CG+  +A +VF  M +++V +W++ I A AM G+ + A+ LF+ M  Q I+P+ 
Sbjct: 391 IDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNG 450

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           + F+GVL ACSH GLV +G   F SM + H +SPQ  HYGCMVDL  RA  L +A++LI+
Sbjct: 451 VTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIE 510

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           +MP  PN +IWGSL++ACQ H  +++  +AA R+ EL+P+  G  V+LSNIYA   +W +
Sbjct: 511 TMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDD 570

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           V  VR  MK +G+ K    S IEVN +VH F   D  H + + I   L  +  +L+  GY
Sbjct: 571 VGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGY 630

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
            P  + +L+D++E+EKK ++  HSEKLA+ +GLI   K   IR+VKNLR+C DCHSF KL
Sbjct: 631 TPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKL 690

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VSKV+  EI++RD  RFH F  G CSC D+W
Sbjct: 691 VSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 268/560 (47%), Gaps = 73/560 (13%)

Query: 33  SPS-IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFE--SLTYAQKA 89
           SPS  G L +CKTL  +KQ H  IL+  + +    + K+V  C  + +    +L YA   
Sbjct: 12  SPSEKGLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSL 71

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F + I +  T  +    N L+R +S        +SLY+ L   G   D+F+FP +L A +
Sbjct: 72  FSH-IPNPPTRFS----NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVS 126

Query: 150 KSSAFGEGVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
           K SA   G+++HG   K GF   D F+++ LI  Y  CG I+D R +FD+MS R+VV+W 
Sbjct: 127 KLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWN 186

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
            +I   ++       + L+ EM   G +P+++ +  V+SACA   NL  G  +  +I + 
Sbjct: 187 IMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDN 246

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR------ 322
           G +  + +  +LV+MY  CGA+  A++++ +   +++V+   ++S Y +LG+ +      
Sbjct: 247 GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIF 306

Query: 323 -------------------------EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
                                    EAL + +EM      PD++TMLS +SA A +G L+
Sbjct: 307 DRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALV 366

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
             +  H Y  +NG      I N +IDMY KCG    A  +F++M  K V+SW+S+I    
Sbjct: 367 QAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFA 426

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
            +GD +S                               A+ LF  M  + I+ + VT +G
Sbjct: 427 MHGDADS-------------------------------AIALFHRMKEQNIEPNGVTFIG 455

Query: 478 VASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-K 535
           V  AC + G ++   K+  + I ++ I    +    +VD++ R    ++AM++   M   
Sbjct: 456 VLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFP 515

Query: 536 RDVSAWTAAIGAMAMEGNGE 555
            +V  W + + A    G  E
Sbjct: 516 PNVIIWGSLMSACQNHGEIE 535


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/635 (40%), Positives = 379/635 (59%), Gaps = 10/635 (1%)

Query: 220 PKEAVYLFFEMVEEGIK---PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
           PK ++ L   ++ + I    P+  +   +     +   ++LG +  A I   G++ NA +
Sbjct: 55  PKPSLNLQLRILLQPILQHFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFL 114

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD---EMLL 333
              +V MY   G +D+A  +F    + + +L N+I+  Y R G        L+    M  
Sbjct: 115 AAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHF 174

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G   D  T+   + + A L  +  GR  HG  LR GLEG   +  ++IDMY+KCG    
Sbjct: 175 LGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGD 234

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++FD M  + + SWN+LIAG +K G++  A ++F  M  R+ +SW  M+ G TQ    
Sbjct: 235 ARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFA 294

Query: 454 EEAMELFRVMLSE--RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
           E+A+ LF  ML +   +K + VT+V V  AC    AL+  + I+ +    G+H +  + T
Sbjct: 295 EQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQT 354

Query: 512 ALVDMFARCGDPQRAMQVFRRMEK--RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
           AL  M+A+C     A   F  + +  +++ AW   I A A  G G +AV +F  MLR G+
Sbjct: 355 ALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGV 414

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           +PD++ F+G+L+ CSH GL++ G + F  M  IH V P++ HY C+VDLLGRAG L EA 
Sbjct: 415 QPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAK 474

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           +LI  MP++    +WG+LLAAC+ H+N++IA  AA R+  L+P+ SG +VLLSN+YA AG
Sbjct: 475 ELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAG 534

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
            W  V ++R  +K QG++K PG S IE+NGK H F   D+SHP+   I   L  +  +++
Sbjct: 535 MWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIK 594

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
            AGY+PD + VL D+ E+EK+Y L+ HSEKLA+AFGL++T   + +RV KNLR+C DCH+
Sbjct: 595 MAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHA 654

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             K +SK+Y+REIIVRD NRFH F+ GSCSC D+W
Sbjct: 655 ATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 214/464 (46%), Gaps = 62/464 (13%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H  I+  GL       +K+V   A  G  +S   A   FD    DN +S    +YNS
Sbjct: 97  QQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDS---AVVVFDRI--DNPSS---LLYNS 148

Query: 109 LIRGYSCIGLGVEA---ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +IR Y+  G        +  Y  +   G+L D FT PFVL +C   S    G  VHG  +
Sbjct: 149 IIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGL 208

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDE--------------------------- 198
           ++G + D +V   LI+ Y +CG I D R++FD+                           
Sbjct: 209 RVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAED 268

Query: 199 ----MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAKL 252
               M  RN+VSWT++I    +    ++A+ LF EM+++G  +KPN VT+V V+ ACA+ 
Sbjct: 269 LFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQS 328

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNT 310
             LE G R+  + + +G+  N+ +  AL  MY KC ++  A+  F       +NL+  NT
Sbjct: 329 AALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNT 388

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGY 365
           +++ Y   G   EA++I + ML  G +PD VT +  +S  +  G +  G      M   +
Sbjct: 389 MITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIH 448

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVE- 423
            +   +E +  +    +D+  + G+   A  +   M  +   S W +L+A    + ++E 
Sbjct: 449 SVEPRVEHYACV----VDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEI 504

Query: 424 ---SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
              +AR +F   P  D+     +L  L  E    E ++  R +L
Sbjct: 505 AELAARRLFVLEP--DNSGNYVLLSNLYAEAGMWEEVKKLRALL 546



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 190/465 (40%), Gaps = 75/465 (16%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
            P   ++  +    T+ +    G Q H  IV  G   + F+   ++  Y   GD+     
Sbjct: 74  FPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVV 133

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEA---VYLFFEMVEEGIKPNSVTMVCVISACAK 251
           VFD +   + + + S+I A  R          +  +  M   G+  ++ T+  V+ +CA 
Sbjct: 134 VFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCAD 193

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF-------------- 297
           L  + +G  V      +G++ +  +  +L+DMY+KCG +  A++LF              
Sbjct: 194 LSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNAL 253

Query: 298 ----------GECKD-------RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP--RP 338
                     G  +D       RN+V    ++S Y + G A +AL + DEML  G   +P
Sbjct: 254 IAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           + VT++S + A AQ   L  GR  H +    GL    S+   +  MY KC     A   F
Sbjct: 314 NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCF 373

Query: 399 DHMSN--KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           D ++   K +++WN++I     +G                         G+       EA
Sbjct: 374 DMIAQNGKNLIAWNTMITAYASHG------------------------CGV-------EA 402

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC---DMQLATAL 513
           + +F  ML   ++ D VT +G+ S C + G +D    +  + +   IH     ++    +
Sbjct: 403 VSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG--LNHFNDMGTIHSVEPRVEHYACV 460

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           VD+  R G    A ++  +M  +   S W A + A     N E A
Sbjct: 461 VDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIA 505


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/689 (37%), Positives = 388/689 (56%), Gaps = 32/689 (4%)

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           +G+ VHG +VK GF     V N LI+FY +   I D   VFDEM +R+++SW S+I  CA
Sbjct: 2   DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              L  +AV LF  M  EG + +S T++ V+ AC +     +G  V  Y    G+ +   
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + NAL+DMY  C    +  ++F   + +N+V    ++++Y R G   +   +  EM L G
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            RPD   + SA+ A A    L  G+  HGY +RNG+E    + N +++MY+KCG      
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGY----- 236

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                     +E AR +F  +  +D ISWNT++GG ++ N+  E
Sbjct: 237 --------------------------MEEARFIFDHVTKKDTISWNTLIGGYSRSNLANE 270

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A  LF  ML + ++ + VTM  +  A   L +L+  + ++AY  + G   D  +A ALVD
Sbjct: 271 AFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVD 329

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ +CG    A ++F  +  +++ +WT  I    M G G  A+ LF +M   GI+PD+  
Sbjct: 330 MYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGS 389

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F  +L ACSH GL ++GW  F +M + H + P++ HY CMVDLL   G L EA + I++M
Sbjct: 390 FSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETM 449

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P+EP+  IW SLL  C+ H+NV +A   AE + EL+PE +G +VLL+NIYA A +W  V 
Sbjct: 450 PIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVR 509

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           +++ ++  +G+R+  G S IEV GK H F + + +HP+   I+  L ++  R+++ G+ P
Sbjct: 510 KLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDP 569

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
                L+  D+      L  HS KLA+AFG+++ S+  PIRV KN R+C  CH  AK +S
Sbjct: 570 KKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFIS 629

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+  REII+RD+NRFH F +G CSC  +W
Sbjct: 630 KMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 212/419 (50%), Gaps = 13/419 (3%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H +++K G G + +  + ++   A+    E    A   FD   + +  S     +NS+I 
Sbjct: 7   HGYLVKYGFGAQCAVCNALISFYAKSNRIED---ALMVFDEMPQRDIIS-----WNSIIG 58

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
           G +  GL  +A+ L+V +   G   D  T   V+ AC +S     G  VHG  V+ G   
Sbjct: 59  GCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLIS 118

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           +  + N L++ Y  C D     ++F  M ++NVVSWT++I +  R     +   LF EM 
Sbjct: 119 ETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMG 178

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            EGI+P+   +   + A A  ++L+ G  V  Y    G++    + NAL++MY+KCG ++
Sbjct: 179 LEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYME 238

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A+ +F     ++ +  NT++  Y R  LA EA  + +EMLL   RP+ VTM   + A+A
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAA 297

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            L  L  GR  H Y +R G    + + N ++DMY+KCG   +A R+FD ++NK ++SW  
Sbjct: 298 SLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTI 357

Query: 412 LIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           +IAG   +G    A  +F +M G     D  S++ +L   +   + +E    F  M +E
Sbjct: 358 MIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNE 416


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 276/766 (36%), Positives = 429/766 (56%), Gaps = 44/766 (5%)

Query: 83  LTYAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           LT A++ FD   ++D      L  +NSLI GYS  G   EA+ +Y EL    I+PD FT 
Sbjct: 157 LTRARQVFDEMPVRD------LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTV 210

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             VL A        +G  +HG  +K G +  V V N L+  Y +     D RRVFDEM  
Sbjct: 211 SSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV 270

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R+ VS+ ++IC   + ++ +E+V +F E +++  KP+ +T+  V+ AC  L++L L   +
Sbjct: 271 RDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYI 329

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNTIMSNYVRLG 319
             Y+ + G    + + N L+D+Y KCG + TA+ +F   ECKD   V  N+I+S Y++ G
Sbjct: 330 YNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT--VSWNSIISGYIQSG 387

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              EA+ +   M++   + D +T L  +S S +L DL  G+  H   +++G+    S+ N
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN 447

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            +IDMY KCG                               +V  + ++FS M   D ++
Sbjct: 448 ALIDMYAKCG-------------------------------EVGDSLKIFSSMGTGDTVT 476

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           WNT++    +   F   +++   M    +  D  T +     C  L A  L K I+  + 
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           + G   ++Q+  AL++M+++CG  + + +VF RM +RDV  WT  I A  M G GE+A+E
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            F +M + GI PDS+VF+ ++ ACSH GLV++G   F  M   + + P I HY C+VDLL
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL 656

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            R+  + +A + I++MP++P+  IW S+L AC+   +++ A   + RI EL+P+  G  +
Sbjct: 657 SRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSI 716

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           L SN YA+  KW  V+ +R  +K++ I K PG S IEV   VH F+SGD+S P+   I  
Sbjct: 717 LASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK 776

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDV-DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
            L  +   +   GY+PD   V  ++ +E+EK+ L+  HSE+LA+AFGL++T    P++V+
Sbjct: 777 SLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVM 836

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH   KL+SK+  REI+VRD NRFH F+ G+CSC D W
Sbjct: 837 KNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/557 (28%), Positives = 275/557 (49%), Gaps = 40/557 (7%)

Query: 29  TPKDSPSIG-SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           T   SP I  +L +   LNEL++ H  ++  GL     +  K++    +   F     + 
Sbjct: 3   TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLI---DKYSHFREPASSL 59

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
             F    +    +  ++++NS+IR +S  GL  EA+  Y +L    + PDK+TFP V+ A
Sbjct: 60  SVF----RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKA 115

Query: 148 CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
           C        G  V+  I+ MGF+ D+FV N L++ Y   G +   R+VFDEM  R++VSW
Sbjct: 116 CAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSW 175

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
            SLI   +     +EA+ ++ E+    I P+S T+  V+ A   L  ++ G  +  +  +
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
            G+ +  ++ N LV MY+K      A+++F E   R+ V  NT++  Y++L +  E++ +
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM 295

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             E  L   +PD +T+ S + A   L DL   +  + Y+L+ G     ++ N +ID+Y K
Sbjct: 296 FLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG    A  +F+ M  K  VSWNS+I+G I++GD+                         
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDL------------------------- 389

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
                  EAM+LF++M+    + D +T + + S    L  L   K +++   K+GI  D+
Sbjct: 390 ------MEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            ++ AL+DM+A+CG+   ++++F  M   D   W   I A    G+    +++  +M + 
Sbjct: 444 SVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503

Query: 568 GIKPDSIVFVGVLTACS 584
            + PD   F+  L  C+
Sbjct: 504 EVVPDMATFLVTLPMCA 520


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/753 (35%), Positives = 418/753 (55%), Gaps = 39/753 (5%)

Query: 97  NETSAT--LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
           N+ SA   +   N ++ GY   G     +  ++++    +  D+ TF  VL    +  + 
Sbjct: 279 NDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSL 338

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G QVH   +K+G D  + V N LIN Y +   I   R VF+ MSER+++SW S+I   
Sbjct: 339 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGI 398

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL-QNLELGDRVCAYIDELGMKAN 273
           A+ DL  EAV LF +++  G+KP+  TM  V+ A + L + L L  ++  +  +    A+
Sbjct: 399 AQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD 458

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
           + +  AL+D Y +   +  A+ LFG   + +LV  N +MS Y +     + L +   M  
Sbjct: 459 SFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHK 517

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG--LEGWDSICNTMIDMYMKCGKQ 391
            G R D  T+ + +     L  +  G+  H Y +++G  L+ W  + + ++DMY+KCG  
Sbjct: 518 QGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLW--VSSGILDMYVKCG-- 573

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
                                        D+ +A+  F  +P  D ++W T++ G  +  
Sbjct: 574 -----------------------------DMSAAQFAFDSIPVPDDVAWTTLISGCIENG 604

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
             E A+ +F  M    +  D  T+  +A A   L AL+  + I+A   K     D  + T
Sbjct: 605 EEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGT 664

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           +LVDM+A+CG    A  +F+R+E  +++AW A +  +A  G G++A++LF +M   GIKP
Sbjct: 665 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKP 724

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D + F+GVL+ACSH GLV++ +   RSM   +G+ P+I HY C+ D LGRAGL+ EA +L
Sbjct: 725 DKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENL 784

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I SM +E +  ++ +LLAAC+   + +     A ++ EL+P  S  +VLLSN+YA+A KW
Sbjct: 785 IDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 844

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             +   R  MK   ++K PG S IEV  K+H F   D S+P+   I   +++M   ++  
Sbjct: 845 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQE 904

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           GYVP+    L+DV+E+EK+  L +HSEKLA+AFGL+ST  + PIRV+KNLR+C DCH+  
Sbjct: 905 GYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAM 964

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K +SKVYDREI++RD NRFH F+ G CSC D+W
Sbjct: 965 KYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 148/565 (26%), Positives = 251/565 (44%), Gaps = 59/565 (10%)

Query: 132 FGILPDKF-TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           FG L D   T   +L  CT           H  I+ +  + + F+ N LI+ Y +CG + 
Sbjct: 50  FGFLRDAISTSDLMLGKCT-----------HARILALEENPERFLVNNLISMYSKCGSLT 98

Query: 191 DGRRVFDEMSERNVVSWTSLICACARR-----DLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
             RRVFD+M ER++VSW S++ A A+      +  KEA  LF  + ++ +  + +T+  +
Sbjct: 99  YARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPM 158

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           +  C     +   +    Y  ++G+  +  +  ALV++Y+K G V   + LF E   R++
Sbjct: 159 LKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDV 218

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT--MLSAVS--------------- 348
           VL N ++  Y+ +G   EA+ +       G  P+ +T  +LS +S               
Sbjct: 219 VLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENG 278

Query: 349 --ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK---------------- 390
             ASA    +   ++  GY+              M++  ++C +                
Sbjct: 279 NDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSL 338

Query: 391 ---QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
              Q++ C       +  +   NSLI    K   +  AR VF+ M  RD ISWN+++ G+
Sbjct: 339 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGI 398

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCD 506
            Q ++  EA+ LF  +L   +K D  TM  V  A   L   L L+K I+ +  K     D
Sbjct: 399 AQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD 458

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             ++TAL+D ++R    + A  +F R    D+ AW A +       +G + +ELF  M +
Sbjct: 459 SFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHK 517

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           QG + D      VL  C     +NQG  +  +     G    +     ++D+  + G + 
Sbjct: 518 QGERSDDFTLATVLKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMS 576

Query: 627 EALDLIKSMPVEPNDVIWGSLLAAC 651
            A     S+PV P+DV W +L++ C
Sbjct: 577 AAQFAFDSIPV-PDDVAWTTLISGC 600



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 247/544 (45%), Gaps = 68/544 (12%)

Query: 49  KQPHCHILKQGLGHKPSYISKVV---CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           +Q HC  LK GL    +  + ++   C   ++G       A+  F+     N +   L  
Sbjct: 342 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGL------ARTVFN-----NMSERDLIS 390

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV----QVH 161
           +NS+I G +   L VEA+ L+++L   G+ PD +T   VL A   +S+  EG+    Q+H
Sbjct: 391 WNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKA---ASSLPEGLSLSKQIH 447

Query: 162 GAIVKMGFDRDVFVENCLINFYG--EC---GDIVDGRRVFDEMSERNVVSWTSLICACAR 216
              +K     D FV   LI+ Y    C    +++ GR  FD      +V+W +++    +
Sbjct: 448 VHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFD------LVAWNAMMSGYTQ 501

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
                + + LF  M ++G + +  T+  V+  C  L  +  G +V AY  + G   +  +
Sbjct: 502 SHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 561

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            + ++DMY+KCG +  A+  F      + V   T++S  +  G    AL +  +M L G 
Sbjct: 562 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGV 621

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            PD  T+ +   AS+ L  L  GR  H   L+        +  +++DMY KCG  + A  
Sbjct: 622 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYC 681

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F  +    + +WN+++ GL ++G+            G+                   EA
Sbjct: 682 LFKRIEMMNITAWNAMLVGLAQHGE------------GK-------------------EA 710

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVD 515
           ++LF+ M S  IK D+VT +GV SAC + G +  A K+I +     GI  +++  + L D
Sbjct: 711 LQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLAD 770

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP-DS 573
              R G  + A  +   M  +   S +   + A  ++G+ E    +  ++L   ++P DS
Sbjct: 771 ALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE--LEPLDS 828

Query: 574 IVFV 577
             +V
Sbjct: 829 SAYV 832


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/707 (37%), Positives = 388/707 (54%), Gaps = 33/707 (4%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           TF  +L  C   +    G  VH  +   G   +      L N Y +C    D RRVFD M
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEE--GIKPNSVTMVCVISACAKLQNLEL 257
             R+ V+W +++   AR  LP  A+     M  E  G +P+SVT+V V+ ACA  + L  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
              V A+    G+     +  A++D Y KCGAV+ A+ +F     RN V  N ++  Y  
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
            G A EA+A+   M+  G      ++L+A+ A  +LG L   R  H  ++R GL    S+
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N +I  Y KC + ++A ++F+ + NK                              +  
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNK------------------------------KTR 287

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           ISWN M+ G TQ    E+A  LF  M  E ++ D  T+V V  A   +     A+WI+ Y
Sbjct: 288 ISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGY 347

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             ++ +  D+ + TAL+DM+++CG    A ++F     R V  W A I      G G+ A
Sbjct: 348 SIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAA 407

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           VELF EM   G  P+   F+ VL ACSH GLV++G   F SM   +G+ P + HYG MVD
Sbjct: 408 VELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVD 467

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGRAG L EA   IK+MP+EP   ++G++L AC+ H+NV++A  +A+ I EL PE+   
Sbjct: 468 LLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVY 527

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           HVLL+NIYA+A  W +VARVR  M+++G++K PG S I++  +VH F SG  +H    +I
Sbjct: 528 HVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDI 587

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
            + L ++   ++D GYVPD T+ + DV++  K  LL+ HSEKLA+A+GLI T+    I++
Sbjct: 588 YARLAKLIEEIKDMGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQI 646

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KNLR+C DCH+  KL+S +  REII+RD  RFH F+ G CSC D+W
Sbjct: 647 KKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 253/568 (44%), Gaps = 59/568 (10%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG--FGILPDKFTFPFVLNACTKSSA 153
           D   S     +N+++ GY+  GL   A+   V + G   G  PD  T   VL AC  + A
Sbjct: 75  DRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARA 134

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
                +VH   ++ G D  V V   +++ Y +CG +   R VFD M  RN VSW ++I  
Sbjct: 135 LHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDG 194

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A      EA+ LF+ MV+EG+     +++  + AC +L  L+   RV   +  +G+ +N
Sbjct: 195 YADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSN 254

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC-NTIMSNYVRLGLAREALAILDEML 332
             + NAL+  Y KC   D A Q+F E  ++   +  N ++  + +     +A  +   M 
Sbjct: 255 VSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQ 314

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           L   RPD  T++S + A A + D L  R  HGY +R+ L+    +   +IDMY KCG+  
Sbjct: 315 LENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVS 374

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +A R+FD   ++ V++WN++I G   +G  ++A E+F EM G          G L  E  
Sbjct: 375 IARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKG---------TGSLPNETT 425

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLAT 511
           F                      + V +AC + G +D  +  +A ++K+ G+   M+   
Sbjct: 426 F----------------------LSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYG 463

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            +VD+  R G    A    + M  +  +S + A +GA  +  N E A E    +   G  
Sbjct: 464 TMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELG-- 521

Query: 571 PDSIVF-----------------VGVLTACSHGGLVNQ-GWHLFRSMTDIHGVSPQIVHY 612
           P+  V+                   V TA    GL    GW + +   ++H       ++
Sbjct: 522 PEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNH 581

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPN 640
               D+  R   L + ++ IK M   P+
Sbjct: 582 QHAKDIYAR---LAKLIEEIKDMGYVPD 606


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 274/799 (34%), Positives = 442/799 (55%), Gaps = 46/799 (5%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H ++LK G        + ++    ++G   S   A+K FD     N  +     +  LI 
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVS---ARKLFDEMPDRNGVT-----WACLIS 74

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG-EGVQVHGAIVKMGF- 169
           GY+  G+  +A  +  E+   G LP++F F   + AC +S  +  +G QVHG  ++ G  
Sbjct: 75  GYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLN 134

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           D  V V N LIN Y +CGDI   R VF  M +++ VSW S+I    +    ++AV  +  
Sbjct: 135 DAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNS 194

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M + G+ P++  ++  +S+CA L  + LG +      +LG+  +  + N L+ +Y +   
Sbjct: 195 MRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSR 254

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA-REALAILDEMLLHGPRPDRVTMLSAVS 348
           +   +++F    +R+ V  NT++      G +  EA+ +  EM+  G  P+RVT ++ ++
Sbjct: 255 LAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLA 314

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
             + L         H  +L+  ++  ++I N ++  Y K                     
Sbjct: 315 TVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGK--------------------- 353

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                     +G++E+  E+FS M  R D +SWN+M+ G     +  +AM+L  +M+   
Sbjct: 354 ----------SGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRG 403

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
            ++D  T   V SAC  +  L+    ++A   +  +  D+ + +ALVDM+++CG    A 
Sbjct: 404 QRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYAS 463

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           + F  M  R++ +W + I   A  G+G+ A+ LF  M   G  PD I FVGVL+ACSH G
Sbjct: 464 RFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIG 523

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV++G+  F+SMT+++G+ P++ HY CMVDLLGRAG L +  + I  MP++PN +IW ++
Sbjct: 524 LVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTV 583

Query: 648 LAACQK--HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           L AC +   +  ++   AAE +  +DP+ +  +VLLSN+YAS GKW ++AR R  M+E  
Sbjct: 584 LGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAA 643

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K  G S + +   VH F +GD SHPE   I + L+E++ ++RDAGYVP +   L D++
Sbjct: 644 VKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLE 703

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
            + K+ LLS+HSEKLA+AF L   S  +PIR++KNLR+C DCHS  K +SKV DR I++R
Sbjct: 704 PENKEELLSYHSEKLAVAFVLTRNS-GLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLR 762

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D+NRFH F  G CSC D+W
Sbjct: 763 DSNRFHHFEDGKCSCRDYW 781


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/710 (36%), Positives = 398/710 (56%), Gaps = 44/710 (6%)

Query: 179 LINFYGECGDIVDGRRVFDEM--SERNVVSWTSLICACARRDLPKEAVYLFFEMV--EEG 234
           L++ Y   G + D    FD +  + R+ V   ++I A AR  L   AV +F  ++  ++ 
Sbjct: 95  LVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDS 154

Query: 235 IKPNSVTMVCVISACAKLQNLELGD--RVCAYIDELGMKANALMVNALVDMYMKC----- 287
           ++P+  +   ++SA  ++ +L +    ++   + +LG  A   + NAL+ +YMKC     
Sbjct: 155 LRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGV 214

Query: 288 -----------------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
                                        G V  A+  F E      V+ N ++S YV+ 
Sbjct: 215 TRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQS 274

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL----EGW 374
           G+  EA  +   M+     PD  T  S +SA A  G  L G+  HG  +R       E  
Sbjct: 275 GMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAA 334

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N ++ +Y K GK  +A +IFD M+ K VVSWN++++G I++G +++A  +F EMP 
Sbjct: 335 LPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPY 394

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           +  +SW  M+ G     + E+A++LF  M SE +K    T  G  +ACG LGAL   K +
Sbjct: 395 KSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQL 454

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +A++ + G         AL+ M+ARCG  + A  VF  M   D  +W A I A+   G+G
Sbjct: 455 HAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHG 514

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
            +A+ELF++M+ QGI PD I F+ +LTAC+H GLV+ G+  F SM    G+SP   HY  
Sbjct: 515 REALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYAR 574

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           ++DLLGRAG +GEA DLIK+MP EP   IW ++L+ C+ + ++++ AYAA+++ ++ PE 
Sbjct: 575 LIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEH 634

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
            G ++LLSN Y++AG+W + ARVR  M+++G++K PG S IEV  KVH F  GD  HP+ 
Sbjct: 635 DGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDA 694

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
           + +   L  +  ++R  GYVPD    L D+   EK+Y+L  HSE+LA++FGL+       
Sbjct: 695 HEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGAT 754

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + V+KNL++C DCH+    +S+   REI+VRD  RFH F+ G CSC ++W
Sbjct: 755 VTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 225/541 (41%), Gaps = 114/541 (21%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGF--GILPDKFTFPFVLNACTKSS--AFGEGVQV 160
           ++N++I  ++   L   A+S++  L      + PD ++F  +L+A  +    A     Q+
Sbjct: 124 LHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQL 183

Query: 161 HGAIVKMGFDRDVFVENCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           H A+ K+G    + V N LI  Y +C   G   D R+V DEM E++ ++WT+++    R+
Sbjct: 184 HCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRK 243

Query: 218 -------------------------------DLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
                                           +  EA  LF  MV + I P+  T   ++
Sbjct: 244 GDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLL 303

Query: 247 SACAKLQNLELGDRVCA--------YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           SACA       G  V          ++ E  +  N    NALV +Y K G +  A ++F 
Sbjct: 304 SACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVN----NALVTLYSKSGKIAVATKIFD 359

Query: 299 ECKDRNLVLCNTIM-------------------------------SNYVRLGLAREALAI 327
               +++V  NTI+                               S YV  GLA +AL +
Sbjct: 360 SMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKL 419

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
            ++M     +P   T   AV+A  +LG L  G+  H ++++ G E  +S  N ++ MY +
Sbjct: 420 FNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYAR 479

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  + A  +F  M N   VSWN++I+ L ++G             GR            
Sbjct: 480 CGAVKDARLVFLVMPNVDSVSWNAMISALGQHGH------------GR------------ 515

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCD 506
                  EA+ELF  M+++ I  DR++ + + +AC + G +D     +  +E++ GI   
Sbjct: 516 -------EALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPG 568

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGNGEQAVELFNEML 565
                 L+D+  R G    A  + + M      A W A +    + G+ E      +++ 
Sbjct: 569 EDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLF 628

Query: 566 R 566
           +
Sbjct: 629 K 629



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 182/373 (48%), Gaps = 41/373 (10%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           ++N++I GY   G+  EA  L+  +    I PD+FTF  +L+AC  +  F  G  VHG  
Sbjct: 263 VWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQF 322

Query: 165 VKMGFD----RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA------- 213
           +++  D      + V N L+  Y + G I    ++FD M+ ++VVSW +++         
Sbjct: 323 IRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCL 382

Query: 214 --CAR--RDLP--------------------KEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
              AR  +++P                    ++A+ LF +M  E +KP   T    ++AC
Sbjct: 383 DNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAAC 442

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
            +L  L+ G ++ A++ + G +A+    NAL+ MY +CGAV  A+ +F    + + V  N
Sbjct: 443 GELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWN 502

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++S   + G  REAL + D+M+  G  PDR++ L+ ++A    G +  G      + R+
Sbjct: 503 AMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERD 562

Query: 370 -GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE---- 423
            G+   +     +ID+  + G+   A  +   M    T   W ++++G   NGD+E    
Sbjct: 563 FGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAY 622

Query: 424 SAREVFSEMPGRD 436
           +A ++F  +P  D
Sbjct: 623 AADQLFKMVPEHD 635



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 181/421 (42%), Gaps = 46/421 (10%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECK--DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
            +LV  Y   G +  +   F       R+ VL N ++S + R  LA  A+++   +L   
Sbjct: 93  TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152

Query: 336 P--RPDRVTMLSAVSASAQLGDLLCGR--MCHGYVLRNGLEGWDSICNTMIDMYMKC--- 388
              RPD  +  S +SA  Q+ DL        H  V + G     S+ N +I +YMKC   
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G    A ++ D M  K  ++W +++ G ++ GDV +AR  F E+ G   + WN M+ G  
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY---IEKNGI-H 504
           Q  M  EA ELFR M+S+RI  D  T   + SAC   G     K ++     ++ + +  
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA----------------- 547
             + +  ALV ++++ G    A ++F  M  +DV +W   +                   
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392

Query: 548 --------MAM------EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
                   M M       G  E A++LFN+M  + +KP    + G + AC   G +  G 
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
            L   +    G          ++ +  R G + +A  +   MP   + V W ++++A  +
Sbjct: 453 QLHAHLVQC-GFEASNSAGNALLTMYARCGAVKDARLVFLVMP-NVDSVSWNAMISALGQ 510

Query: 654 H 654
           H
Sbjct: 511 H 511



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 27/228 (11%)

Query: 20  LTNQHKAK-TTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCA 75
           L NQ +++   P D    G++  C  L  LK   Q H H+++ G     S  + ++   A
Sbjct: 419 LFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYA 478

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL 135
           + G  +          + +  N  S +   +N++I      G G EA+ L+ ++   GI 
Sbjct: 479 RCGAVKDARLV-----FLVMPNVDSVS---WNAMISALGQHGHGREALELFDQMVAQGIY 530

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC------LINFYGECGDI 189
           PD+ +F  +L AC  +    +G Q   ++     +RD  +         LI+  G  G I
Sbjct: 531 PDRISFLTILTACNHAGLVDDGFQYFESM-----ERDFGISPGEDHYARLIDLLGRAGRI 585

Query: 190 VDGRRVFDEMS-ERNVVSWTSLICAC---ARRDLPKEAVYLFFEMVEE 233
            + R +   M  E     W +++  C      +L   A    F+MV E
Sbjct: 586 GEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPE 633


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 280/818 (34%), Positives = 435/818 (53%), Gaps = 42/818 (5%)

Query: 29   TPKDSPSIGSLKNCKTLNEL-KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
            TP    S+ S      L EL +Q HC ++K G  H  +Y+   +   A       L  A+
Sbjct: 260  TPYVLSSVLSASTKIQLFELGEQLHCLVIKWGF-HSETYVCNGLV--ALYSRSRKLISAE 316

Query: 88   KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
            + F      +  S     YNSLI G    G    A+ L+ ++    + PD  T   +L+A
Sbjct: 317  RIFSTMNSRDGVS-----YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371

Query: 148  CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
            C    A  +G+Q+H   +K G   D+ +E  L++ Y +C D+    + F      N+V W
Sbjct: 372  CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLW 431

Query: 208  TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
              ++ A  + D   ++  +F +M  EG+ PN  T   ++  C  L  L LG+++  ++ +
Sbjct: 432  NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491

Query: 268  LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
             G + N  + + L+DMY K G +  A ++     + ++V    +++ YV+  +  EAL +
Sbjct: 492  TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQL 551

Query: 328  LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             +EM   G + D +   SA+SA A +  L  G+  H      G     SI N +I +Y +
Sbjct: 552  FEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYAR 611

Query: 388  CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
            CG+                               ++ A   F ++  +++ISWN+++ GL
Sbjct: 612  CGR-------------------------------IQEAYLAFEKIGDKNNISWNSLVSGL 640

Query: 448  TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
             Q   FEEA+++F  ML    +V+  T     SA   L  +   + I++ + K G   + 
Sbjct: 641  AQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSER 700

Query: 508  QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            +++ +L+ ++A+ G    A + F  M +R+V +W A I   +  G G +A+ LF EM   
Sbjct: 701  EVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVC 760

Query: 568  GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
            GI P+ + FVGVL+ACSH GLV +G   F SM  IH + P+  HY C+VDLLGRAG L  
Sbjct: 761  GIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDR 820

Query: 628  ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
            A++ IK MP+  + +IW +LL+AC  H+N++I   AA  + EL+PE S  +VL+SNIYA 
Sbjct: 821  AMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAV 880

Query: 688  AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
            + +W +    R  MK++G++K PG S IEV   VH F +GD+ HP  N I   +  +N R
Sbjct: 881  SRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRR 940

Query: 748  LRDAGYVPDLTNVLLDVDEQEKKYLLSH-HSEKLAMAFGLISTSKTMPIRVVKNLRLCCD 806
              + GYV D +  LL+  EQ +K  ++H HSEKLA+AFGL+S    +PIRV+KNLR+C D
Sbjct: 941  TSEIGYVQD-SFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCND 999

Query: 807  CHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            CH++ K VSK+ +R IIVRD +RFH F  G CSC DFW
Sbjct: 1000 CHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 286/616 (46%), Gaps = 45/616 (7%)

Query: 39  LKNCKT---LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L+ C T   L E  + HC I K G   +P  I  +V    + G       A K FD    
Sbjct: 65  LEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHG---AVKVFD---- 117

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS-AF 154
              ++ ++F +N +I  +       +   L+  +   GI P+ +TF  VL AC     AF
Sbjct: 118 -ENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAF 176

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
               QVH      GFD    V N LI+ Y + G I   ++VF+ +  +++V+W ++I   
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           ++  L +EA+ LF +M    I P    +  V+SA  K+Q  ELG+++   + + G  +  
Sbjct: 237 SQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + N LV +Y +   + +A+++F     R+ V  N+++S  V+ G +  AL +  +M   
Sbjct: 297 YVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD 356

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
             +PD +T+ S +SA A +G L  G   H + ++ G+     +  +++D+Y KC   E A
Sbjct: 357 CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETA 416

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            + F     + +V W                               N ML    Q +   
Sbjct: 417 HKFFLTTETENIVLW-------------------------------NVMLVAYGQLDNLS 445

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           ++ E+FR M  E +  ++ T   +   C  LGAL L + I+ ++ K G   ++ + + L+
Sbjct: 446 DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLI 505

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+A+ G    A+++ RR+ + DV +WTA I          +A++LF EM  +GI+ D+I
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNI 565

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F   ++AC+    + QG  +  + +   G    +     ++ L  R G + EA    + 
Sbjct: 566 GFASAISACAGIRALRQGQQI-HAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624

Query: 635 MPVEPNDVIWGSLLAA 650
           +  + N++ W SL++ 
Sbjct: 625 IG-DKNNISWNSLVSG 639



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 259/548 (47%), Gaps = 53/548 (9%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+  +   + ++L  C  S +  E +++H  I K GFD +  + + L++ Y   GD    
Sbjct: 53  GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            +VFDE S R+V SW  +I     +    +   LF  M+ EGI PN  T   V+ AC   
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG- 171

Query: 253 QNLELGDRVCAYIDEL-------GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
                GD    Y+ ++       G  ++ L+ N L+D+Y K G +++AK++F     +++
Sbjct: 172 -----GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDI 226

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V    ++S   + GL  EA+ +  +M      P    + S +SAS ++     G   H  
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           V++ G      +CN ++ +Y +  K   A RIF  M+++  VS+NSLI+GL++ G     
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG----- 341

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
              FS                       + A+ELF  M  + +K D +T+  + SAC  +
Sbjct: 342 ---FS-----------------------DRALELFTKMQRDCLKPDCITVASLLSACASV 375

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
           GAL     ++++  K G+  D+ L  +L+D++++C D + A + F   E  ++  W   +
Sbjct: 376 GALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVML 435

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
            A     N   + E+F +M  +G+ P+   +  +L  C+  G +  G  +    T +   
Sbjct: 436 VAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH---THVIKT 492

Query: 606 SPQIVHYGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
             Q+  Y C  ++D+  + G L  AL +++ +P E + V W +++A   +H   D+ + A
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH---DMFSEA 548

Query: 664 AERITELD 671
            +   E++
Sbjct: 549 LQLFEEME 556



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 148/366 (40%), Gaps = 75/366 (20%)

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           + +++ M   G R +    L  +      G L      H  + ++G +G   + ++++D 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y + G Q  A ++FD  SN++V SWN +I   +     +S  +VF               
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ---KSNFQVFC-------------- 145

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC-GYLGALDLAKWIYAYIEKNGI 503
                         LFR ML+E I  +  T  GV  AC G   A +  K +++     G 
Sbjct: 146 --------------LFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGF 191

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
                +A  L+D++++ G  + A +VF  +  +D+  W A I  ++  G  E+A+ LF +
Sbjct: 192 DSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCD 251

Query: 564 MLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWH------------------ 594
           M    I P   V   VL+A +           H  ++  G+H                  
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311

Query: 595 ------LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWG 645
                 +F +M    GVS     Y  ++  L + G    AL+L   M    ++P+ +   
Sbjct: 312 LISAERIFSTMNSRDGVS-----YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVA 366

Query: 646 SLLAAC 651
           SLL+AC
Sbjct: 367 SLLSAC 372


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/702 (37%), Positives = 392/702 (55%), Gaps = 36/702 (5%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           V+ +C +  A  EG ++H  I ++G   DV+V N L+  YG+CG + + R VF+    +N
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQNLELGDRVC 262
           V SWT LI  CA+    +EA+ LF+EM+++GI+P+SV+    I+AC A  + L  G  + 
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           A +   G +   +   +LV MY KCG+++ + + F    + N V  N +++ +       
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGL 219

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL  L +M L G R   VT ++ +SA  Q   L   R  H  +LR G +    + N ++
Sbjct: 220 EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFD--QDVVNVIL 277

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           +MY KCG     C                          ++ A  +F  M   D I+WNT
Sbjct: 278 NMYGKCG-----C--------------------------LQDAEAMFKSMSQPDVIAWNT 306

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           M+   +Q     EA+  + +M  E +  D  T V V  AC  LG +++ K ++  +    
Sbjct: 307 MIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRA 366

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
                +LA +LV+M+ +CG    A  +F +  K  V+ W A IGA A   + +QA ELF 
Sbjct: 367 FQV-TELANSLVNMYGKCGILDVARSIFDKTAKGSVT-WNAMIGAYAQHSHEQQAFELFL 424

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
            M   G +P  I F+ VL+AC++ GL  +    F  M   HGV P   HYGCMV+ LG+A
Sbjct: 425 LMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKA 484

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G L +A  LI+ MP EP+ + W S LA C+ H ++    +AA+    +DPE S  +V L+
Sbjct: 485 GRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALA 544

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
            I+A AG +   +R+R  M ++GIRK  G S I++   V+EFT+GD+S+P    I   L+
Sbjct: 545 RIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELK 604

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
            ++  ++ AGY PD+T+V  DV+  +K+ LL  HSE+LA+AFG+ISTS+  P+R++KNLR
Sbjct: 605 RLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLR 664

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH+  KL SK+  REIIVRD+NRFH F+ GSCSC DFW
Sbjct: 665 VCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 205/435 (47%), Gaps = 21/435 (4%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I S      L E ++ H  I + GLG      + +V    + G+ E    A+  F+    
Sbjct: 41  IQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEE---ARLVFEATPA 97

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF- 154
            N     +F +  LI   +  G   EA++L+ E+   GI P   +F   +NAC+    F 
Sbjct: 98  KN-----VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFL 152

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  +H  + + GF   V     L++ Y +CG + +  + F+ M+E N VSW ++I A 
Sbjct: 153 PAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAF 212

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A      EA+    +M  EGI+  SVT + ++SA  +   L+    +   I   G   + 
Sbjct: 213 AEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD- 271

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            +VN +++MY KCG +  A+ +F      +++  NT+++ Y + G   EAL   + M   
Sbjct: 272 -VVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEE 330

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G  PD  T +S + A A LGD+  G+  H  +     +  + + N++++MY KCG  ++A
Sbjct: 331 GVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTE-LANSLVNMYGKCGILDVA 389

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF------SEMPGRDHISWNTMLGGLT 448
             IFD  + K  V+WN++I    ++   + A E+F       E P   +I++ ++L    
Sbjct: 390 RSIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEP--SYITFMSVLSACA 446

Query: 449 QENMFEEAMELFRVM 463
              + EEA   F  M
Sbjct: 447 NAGLPEEAHSYFVCM 461



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 208/447 (46%), Gaps = 39/447 (8%)

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           V VI +CA+L  L  G R+   I  +G+ ++  + N LV MY KCG+++ A+ +F     
Sbjct: 38  VRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA-SAQLGDLLCGRM 361
           +N+     +++   + G ++EALA+  EML  G +P  V+  +A++A SA    L  GR 
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H  + R G +       +++ MY KCG  E + + F+ M+    VSWN++IA       
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAF----- 212

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
            E  R                   GL       EA+   + M  E I+   VT + + SA
Sbjct: 213 AEHRR-------------------GL-------EALRTLQKMFLEGIRACSVTYITLMSA 246

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
                 L  A++I+  I + G   D  +   +++M+ +CG  Q A  +F+ M + DV AW
Sbjct: 247 YDQPSQLKSARYIHDCILRTGF--DQDVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAW 304

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
              I A +  G+  +A+  +  M  +G+ PD   +V V+ AC+  G +  G  + R + D
Sbjct: 305 NTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGD 364

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
                 ++ +   +V++ G+ G+L  A  +          V W +++ A  +H + +  A
Sbjct: 365 RAFQVTELAN--SLVNMYGKCGILDVARSIFDK--TAKGSVTWNAMIGAYAQHSH-EQQA 419

Query: 662 YAAERITELDPEKSGVHVLLSNIYASA 688
           +    +  LD E+      +S + A A
Sbjct: 420 FELFLLMRLDGEEPSYITFMSVLSACA 446



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 171/353 (48%), Gaps = 23/353 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SL  + K F+   + N  S     +N++I  ++    G+EA+    ++   GI     T+
Sbjct: 186 SLEESVKTFESMTELNAVS-----WNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTY 240

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +++A  + S       +H  I++ GFD+DV   N ++N YG+CG + D   +F  MS+
Sbjct: 241 ITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQ 298

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            +V++W ++I A ++     EA+  +  M EEG+ P+  T V VI ACA L ++E+G +V
Sbjct: 299 PDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQV 358

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
              + +   +   L  N+LV+MY KCG +D A+ +F +   +  V  N ++  Y +    
Sbjct: 359 HRRLGDRAFQVTEL-ANSLVNMYGKCGILDVARSIFDKTA-KGSVTWNAMIGAYAQHSHE 416

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLG-------DLLCGRMCHGYVLRNGLEGW 374
           ++A  +   M L G  P  +T +S +SA A  G         +C +  HG     G  G 
Sbjct: 417 QQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYG- 475

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAR 426
                 M++   K G+   A  +   M     V++W S +A    +GD++  +
Sbjct: 476 -----CMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGK 523



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 1/193 (0%)

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
           L +R   D    V V  +C  LGAL   + I+  I + G+  D+ ++  LV M+ +CG  
Sbjct: 26  LQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSL 85

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           + A  VF     ++V +WT  I   A  G  ++A+ LF EML+QGI+P S+ F   + AC
Sbjct: 86  EEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINAC 145

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           S G           ++   +G    +V    +V +  + G L E++   +SM  E N V 
Sbjct: 146 SAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESM-TELNAVS 204

Query: 644 WGSLLAACQKHQN 656
           W +++AA  +H+ 
Sbjct: 205 WNAMIAAFAEHRR 217


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/760 (35%), Positives = 422/760 (55%), Gaps = 37/760 (4%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+K FD   + N+  +    +NS+I  YS  G  +EA+ L+ E+   G+  + +T    L
Sbjct: 64  ARKLFDRMNERNDVVS----WNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAAL 119

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC  SS    G+++H AI+K     DV+V N L+  +   G +    R+FDE+ E++ +
Sbjct: 120 QACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNI 179

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           +W S+I    +  L  EA+  F  + +  +KP+ V+++ +++A  +L  L  G  + AY 
Sbjct: 180 TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYA 239

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            +  + +N  + N L+DMY KC  V  A  +F +  +++L+   T+++ Y +     EAL
Sbjct: 240 MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEAL 299

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
            +L ++   G   D + + S + A + L  L   +  HGY L+ GL     + N +ID+Y
Sbjct: 300 KLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDL-MMQNMIIDVY 358

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
             CG    A R+F+ +  K V                               +SW +M+ 
Sbjct: 359 ADCGNINYATRMFESIKCKDV-------------------------------VSWTSMIS 387

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
                 +  EA+ +F +M    ++ D +T+V + SA   L AL+  K I+ +I + G   
Sbjct: 388 CYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFML 447

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           +     +LVDM+A CG  + A +VF     + +  WT  I A  M G G+ AVELF+ M 
Sbjct: 448 EGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIME 507

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
            Q + PD I F+ +L ACSH GL+N+G  L  +M   + + P   HY C+VDLLGRA  L
Sbjct: 508 DQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHL 567

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
            EA   +KSM +EP   +W + L AC+ H N  +   AA+++ +LDP+  G +VL+SN++
Sbjct: 568 EEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVF 627

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
           A++G+W +V  VR++MK  G++K PG S IEV  KVH F   D+SHPE   I   L ++ 
Sbjct: 628 AASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQIT 687

Query: 746 CRL-RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
            +L ++ GYVP    VL +V ++EK  +L  HSE+LA+A+GL+STS+  PIR+ KNLR+C
Sbjct: 688 EKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVC 747

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH+F KLVSK ++RE+IVRD +RFH F  G CSC DFW
Sbjct: 748 VDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787



 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 164/554 (29%), Positives = 274/554 (49%), Gaps = 66/554 (11%)

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G+  D FTFP VL AC        G ++HG I+K G+D  VFV N L++ Y +C DI+ 
Sbjct: 4   LGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILG 63

Query: 192 GRRVFDEMSERN-VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
            R++FD M+ERN VVSW S+I A +      EA+ LF EM + G+  N+ T+V  + AC 
Sbjct: 64  ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
                +LG  + A I +     +  + NALV M+++ G +  A ++F E  +++ +  N+
Sbjct: 124 DSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++ + + GL  EAL     +     +PD V+++S ++AS +LG LL G+  H Y ++N 
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           L+    I NT+IDMY KC     A  +FD M NK ++SW ++IA   +N           
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQN----------- 292

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                               N   EA++L R + ++ + VD + +     AC  L  L  
Sbjct: 293 --------------------NCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSH 332

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
           AK ++ Y  K G+  D+ +   ++D++A CG+   A ++F  ++ +DV +WT+ I     
Sbjct: 333 AKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVH 391

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWHL---- 595
            G   +A+ +F  M    ++PDSI  V +L+A +           HG +  +G+ L    
Sbjct: 392 NGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGST 451

Query: 596 FRSMTDIHGV---------------SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE-- 638
             S+ D++                 S  +V +  M++  G  G    A++L   M  +  
Sbjct: 452 VNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKL 511

Query: 639 -PNDVIWGSLLAAC 651
            P+ + + +LL AC
Sbjct: 512 IPDHITFLALLYAC 525


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 273/799 (34%), Positives = 415/799 (51%), Gaps = 39/799 (4%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C  L+  KQ H    K GL       S +V   A+ G  E    A K F    + N+ + 
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIE---LASKMFIGMPEQNDVT- 281

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               +N L+ GY+  G     + L+  +    +  ++FT   VL  C  S    +G  +H
Sbjct: 282 ----WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIH 337

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             I+K G++ + F+   L++ Y +CG  +D   VF  + + ++V W++LI    ++   +
Sbjct: 338 SLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSE 397

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           E++ LF  M      PN  T+  ++SA     NL+ G  + A + + G + +  + NALV
Sbjct: 398 ESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALV 457

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            MYMK G V    +L+    DR+L+  N  +S     G+    L I   ML  G  P+  
Sbjct: 458 TMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMY 517

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T +S + + + L D+  GR  H ++++N L+  + +C  +IDMY KC             
Sbjct: 518 TFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY----------- 566

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                               +E A   F+ +  RD  +W  ++    Q N  E+A+  FR
Sbjct: 567 --------------------LEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFR 606

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M  E +K +  T+ G  S C  L +L+  + +++ + K+G   DM + +ALVDM+A+CG
Sbjct: 607 QMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             + A  +F  + +RD  AW   I   A  G G +A+  F  ML +GI PD + F G+L+
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV +G   F SM    G+SP + H  CMVD+LGR G   E  D I+ M +  N 
Sbjct: 727 ACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNA 786

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           +IW ++L A + H N+ +   AA ++ EL PE+   ++LLSNI+A+ G+W +V RVR  M
Sbjct: 787 LIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLM 846

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
             +G++K PG S +E NG+VH F S D SHP++  I   L E++  L    YVP    VL
Sbjct: 847 SSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVL 906

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            +V E EKK  L  HSE+LA+ F LISTS    IR+ KNLR+C DCH   K +S + ++E
Sbjct: 907 HNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQE 966

Query: 822 IIVRDNNRFHFFRQGSCSC 840
           I+VRD  RFH F+ G+CSC
Sbjct: 967 IVVRDVRRFHHFKNGACSC 985



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 268/551 (48%), Gaps = 35/551 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +LI+G    G   ++I L+ E+   GI+P++FT    L AC+   A   G Q+H    
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G   D+FV + L++ Y +CG+I    ++F  M E+N V+W  L+   A+R      + 
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF  M+E  +K N  T+  V+  CA  +NL+ G  + + I + G + N  +   LVDMY 
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG    A  +F   K  ++V+ + +++   + G + E++ +   M L    P++ T+ S
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICS 420

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +SA+   G+L  G+  H  V + G E   ++ N ++ MYMK G      ++++ M ++ 
Sbjct: 421 LLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           ++SWN+ ++GL   G                               M++  + +F  ML 
Sbjct: 481 LISWNAYLSGLHDCG-------------------------------MYDRPLTIFYHMLE 509

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E    +  T + +  +C  L  +   + ++A+I KN +  +  + TAL+DM+A+C   + 
Sbjct: 510 EGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLED 569

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A   F R+  RD+  WT  I   A    GE+A+  F +M ++G+KP+     G L+ CS 
Sbjct: 570 ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
              +  G  L  SM    G    +     +VD+  + G + EA  L +++ +  + + W 
Sbjct: 630 LASLEGGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWN 687

Query: 646 SLLAACQKHQN 656
           +++  C   QN
Sbjct: 688 TII--CGYAQN 696



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 209/444 (47%), Gaps = 31/444 (6%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L  C    + G    +HG IVK   + D  +   L+N Y +C      R V  +M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +R+VVSWT+LI          +++YLF EM  EGI PN  T+   + AC+    L+LG +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           + A   +LG+  +  + +ALVD+Y KCG ++ A ++F    ++N V  N +++ Y + G 
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
               L +   M+    + +  T+ + +   A   +L  G++ H  +++ G EG + I   
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++DMY KCG    A  +F  +    +V W++LI                           
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALIT-------------------------- 388

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
                 L Q+   EE+++LF +M       ++ T+  + SA    G L   + I+A + K
Sbjct: 389 -----CLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
            G   D+ ++ ALV M+ + G      +++  M  RD+ +W A +  +   G  ++ + +
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503

Query: 561 FNEMLRQGIKPDSIVFVGVLTACS 584
           F  ML +G  P+   F+ +L +CS
Sbjct: 504 FYHMLEEGFIPNMYTFISILGSCS 527



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 6/277 (2%)

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W SL+    K      AR V ++MP RD +SW  ++ GL  E    +++ LF+ M +E I
Sbjct: 150 WVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGI 209

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             +  T+     AC    ALDL K ++A   K G+  D+ + +ALVD++A+CG+ + A +
Sbjct: 210 MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASK 269

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F  M +++   W   +   A  G+    ++LF  M+   +K +      VL  C++   
Sbjct: 270 MFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKN 329

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGC-MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           + QG  +   +        + +  GC +VD+  + GL  +A+ + K++  +P+ V+W +L
Sbjct: 330 LKQGQVIHSLIIKCGYEGNEFI--GCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSAL 386

Query: 648 LAAC--QKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           +     Q      I  +   R+ +  P +  +  LLS
Sbjct: 387 ITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLS 423



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 2/167 (1%)

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C    +L +AK I+  I K+ I+ D  L  +LV+++A+C     A  V  +M  RDV +W
Sbjct: 122 CASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSW 181

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           TA I  +  EG    ++ LF EM  +GI P+       L ACS    ++ G  +      
Sbjct: 182 TALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFK 241

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + G+   +     +VDL  + G +  A  +   MP E NDV W  LL
Sbjct: 242 L-GLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLL 286


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 289/815 (35%), Positives = 427/815 (52%), Gaps = 100/815 (12%)

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR--DVFVENCLINFYGEC 186
           + G G  PD F FP VL A         G Q+H  + K G+     V ++N L+N YG+C
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G + D  +VFD ++ER+ VSW S+I A  R +  + A+  F  M+ EG +P+S T+V + 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 247 SACAKLQN---LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
            AC+ L+    L LG ++       G        NAL+ MY K G +D AK L    +DR
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           +LV  N+++S++ +     EAL  L  M+L G +PD VT  S + A + L  L  G+  H
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 364 GYVLR------NGLEG-------------------WDSIC-------NTMIDMYMKCGKQ 391
            Y LR      N   G                   +DS+        N MI  Y +    
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299

Query: 392 EMACRIFDHM-------SNKTVVS---------------------------------WNS 411
           E A  +F  M       SN T +S                                  N+
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNA 359

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM--LSER-- 467
           LI    + GD+++++ +F  M  RD +SWNT++          +A+ L   M  + E+  
Sbjct: 360 LIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKST 419

Query: 468 ------------IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
                        K + +T++ V   C  L AL   K I+AY  +N +   + + +ALVD
Sbjct: 420 YDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVD 479

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-----IK 570
           M+A+CG    A +VF +M  R+V  W   I A  M G G++++ELF +M+ +G     +K
Sbjct: 480 MYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVK 539

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           P  + F+ +  +CSH G+V++G  LF  M + HG+ P   HY C+VDL+GRAG + EA  
Sbjct: 540 PTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYG 599

Query: 631 LIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           L+ +MP   + V  W SLL AC+ + N++I   AAE + +L P+ +  +VLLSNIY+SAG
Sbjct: 600 LVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAG 659

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
            W     +R +MK  G++K PG S IE   +VH+F +GD SHP+   +   L  ++ RL+
Sbjct: 660 LWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLK 719

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
             GYVPD   VL D+DE+EK+ +L  HSEKLA+AFG+++T     IRV KNLR+C DCH+
Sbjct: 720 KEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHT 779

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +K +SK+ DREII+RD  RFH F+ G+CSC D+W
Sbjct: 780 ASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/680 (37%), Positives = 397/680 (58%), Gaps = 39/680 (5%)

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R++F++M  R++VSW  +I  C R    + A  LF +M E  +    V+   ++S  A+
Sbjct: 99  ARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDV----VSWNAMLSGYAQ 154

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
              ++    +    DE+  K N++  N ++  Y++ G ++ A++LF    D  L+  N +
Sbjct: 155 NGYVKEAKEI---FDEMPCK-NSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCM 210

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR----------- 360
           M  YV+     +A  I D M    P  D V+  + +S  AQ G+LL  +           
Sbjct: 211 MGGYVKRNRLVDARGIFDRM----PERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV 266

Query: 361 -----MCHGYV----------LRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNK 404
                M  GYV          + +G+   +S+  N +I  Y++C + + A  +F+ M  +
Sbjct: 267 FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ 326

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V SWN++I G  +NGD+  AR  F  MP RD ISW  ++ G  Q    EEA+ LF  M 
Sbjct: 327 NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 386

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
            +  +++R T     S C  + AL+L K ++  + K G+     +  AL+ M+ +CG+  
Sbjct: 387 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNID 446

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A  VF  +E+++V +W   I   A  G G++A+ LF  M + GI PD +  VGVL+ACS
Sbjct: 447 DAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACS 506

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLV++G   F SMT  +G++    HY CM+DLLGRAG L +A +L+K+MP EP+   W
Sbjct: 507 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 566

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
           G+LL A + H N ++   AA+ I E++P+ SG++VLLSN+YA++G+W +V R+RL+M+++
Sbjct: 567 GALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDR 626

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
           G++K+PG S +EV  K+H FT GD  HPE + I + L E++ +++  GYV     VL DV
Sbjct: 627 GVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDV 686

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           +E+EK ++L +HSEKLA+AFG+++     PIRV+KNLR+C DCH+  K +SK+  R II+
Sbjct: 687 EEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIIL 746

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD++RFH F  G CSC D+W
Sbjct: 747 RDSHRFHHFNGGQCSCGDYW 766



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 224/504 (44%), Gaps = 88/504 (17%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+++ GY+  G   EA  ++ E+       +  ++  +L A  ++    +  +    + 
Sbjct: 145 WNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLAAYVQNGRIEDARR----LF 196

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +   D ++   NC++  Y +   +VD R +FD M ER+ VSW ++I   A+     EA  
Sbjct: 197 ESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQR 256

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF    EE    +  T   ++S   +   L+   RV   + E     N++  NA++  Y+
Sbjct: 257 LF----EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPE----KNSVSWNAIIAGYV 308

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNT-------------------------------IMSN 314
           +C  +D A++LF     +N+   NT                               I++ 
Sbjct: 309 QCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAG 368

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y + G   EAL +  EM   G R +R T  S +S  A++  L  G+  HG V++ GLE  
Sbjct: 369 YAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESG 428

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N ++ MY KCG  + A  +F+ +  K VVSWN++IAG  ++G              
Sbjct: 429 CYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG-------------- 474

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KW 493
                              +EA+ LF  M    I  D VTMVGV SAC + G +D   ++
Sbjct: 475 -----------------FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 517

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEG 552
            Y+  +  GI  + +  T ++D+  R G    A  + + M  + D + W A +GA  + G
Sbjct: 518 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 577

Query: 553 N---GEQAVELFNEMLRQGIKPDS 573
           N   GE+A ++  EM     +PD+
Sbjct: 578 NTELGEKAAKMIFEM-----EPDN 596



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 180/384 (46%), Gaps = 42/384 (10%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+  FD   + +E S     +N++I GY+  G  +EA  L+ E      + D FT+ 
Sbjct: 220 LVDARGIFDRMPERDEVS-----WNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWT 270

Query: 143 FVLNACTKSSAFGEGVQVH-----------GAIV-------KMGFDRDVFVE-------- 176
            +++   ++    E  +V             AI+       +M   R++F          
Sbjct: 271 AMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS 330

Query: 177 -NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI 235
            N +I  Y + GDI   R  FD M +R+ +SW ++I   A+    +EA++LF EM  +G 
Sbjct: 331 WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE 390

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           + N  T    +S CA++  LELG +V   + + G+++   + NAL+ MY KCG +D A  
Sbjct: 391 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 450

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F   +++ +V  NT+++ Y R G  +EAL + + M   G  PD VTM+  +SA +  G 
Sbjct: 451 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510

Query: 356 LLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLI 413
           +  G    +      G+         MID+  + G+ + A  +  +M       +W +L+
Sbjct: 511 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570

Query: 414 AGLIKNGDVE----SAREVFSEMP 433
                +G+ E    +A+ +F   P
Sbjct: 571 GASRIHGNTELGEKAAKMIFEMEP 594



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 195/489 (39%), Gaps = 117/489 (23%)

Query: 268 LGMKANALMVNALVDMYMKCGAVDTA-------------------------------KQL 296
           L   A+ +  N  +  +M+ G  D+A                               +QL
Sbjct: 43  LATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQL 102

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F +   R+LV  N ++S  VR    R A  + D+M    P  D V+  + +S  AQ    
Sbjct: 103 FEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQM----PERDVVSWNAMLSGYAQ---- 154

Query: 357 LCGRMCHGYVLRNGLEGWDSI-------CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                 +GYV +   E +D +        N M+  Y++ G+ E A R+F+  ++  ++SW
Sbjct: 155 ------NGYV-KEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISW 207

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N ++ G +K   +  AR +F  MP RD +SWNTM+ G  Q     EA  LF     E   
Sbjct: 208 NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----EESPV 263

Query: 470 VDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLA------------------ 510
            D  T   + S     G LD A+ ++    EKN +  +  +A                  
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM 323

Query: 511 --------TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
                     ++  +A+ GD  +A   F RM +RD  +W A I   A  G GE+A+ LF 
Sbjct: 324 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 383

Query: 563 EMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGW------------------ 593
           EM R G + +   F   L+ C+           HG +V  G                   
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443

Query: 594 HLFRSMTDIHGV-SPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLA 649
           ++  +     G+   ++V +  M+    R G   EAL L +SM    + P+DV    +L+
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 503

Query: 650 ACQKHQNVD 658
           AC     VD
Sbjct: 504 ACSHTGLVD 512



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 152/332 (45%), Gaps = 27/332 (8%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N MI   +   K  +A ++F+ M  + +VSWN +I+G ++  ++ +AR +F +MP RD +
Sbjct: 84  NAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVV 143

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN ML G  Q    +EA E+F  M  +    + ++  G+ +A    G ++ A+ ++   
Sbjct: 144 SWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRLFES- 198

Query: 499 EKNGIHCDMQLAT--ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
                  D +L +   ++  + +      A  +F RM +RD  +W   I   A  G   +
Sbjct: 199 -----KADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLE 253

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A  LF E   +    D   +  +++     G++++   +F  M + + VS   +  G + 
Sbjct: 254 AQRLFEESPVR----DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYV- 308

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
               +   + +A +L ++MP + N   W +++      QN DIA   A    +  P++  
Sbjct: 309 ----QCKRMDQARELFEAMPCQ-NVSSWNTMITGYA--QNGDIA--QARNFFDRMPQRDS 359

Query: 677 VH-VLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           +    +   YA +G       + ++MK  G R
Sbjct: 360 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 391



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 53/271 (19%)

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
           ++  +V WN  I   ++NG  +SA  +F+ MP R  ISWN M+ G    + F  A +LF 
Sbjct: 45  TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFE 104

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M +                       DL  W                   ++    R  
Sbjct: 105 KMPTR----------------------DLVSW-----------------NVMISGCVRYR 125

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           + + A  +F +M +RDV +W A +   A  G  ++A E+F+EM  +    +SI + G+L 
Sbjct: 126 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLA 181

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           A    G +     LF S  D      +++ + CM+    +   L +A  +   MP E ++
Sbjct: 182 AYVQNGRIEDARRLFESKADW-----ELISWNCMMGGYVKRNRLVDARGIFDRMP-ERDE 235

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           V W ++++     QN ++    A+R+ E  P
Sbjct: 236 VSWNTMISGYA--QNGEL--LEAQRLFEESP 262


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 280/818 (34%), Positives = 434/818 (53%), Gaps = 42/818 (5%)

Query: 29   TPKDSPSIGSLKNCKTLNEL-KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
            TP    S+ S      L EL +Q HC ++K G  H  +Y+   +   A       L  A+
Sbjct: 260  TPYVLSSVLSASTKIQLFELGEQLHCLVIKWGF-HSETYVCNGLV--ALYSRSRKLISAE 316

Query: 88   KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
            + F      +  S     YNSLI G    G    A+ L+ ++    + PD  T   +L+A
Sbjct: 317  RIFSTMNSRDGVS-----YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371

Query: 148  CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
            C    A  +G+Q+H   +K G   D+ +E  L++ Y +C D+    + F      N+V W
Sbjct: 372  CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLW 431

Query: 208  TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
              ++ A  + D   ++  +F +M  EG+ PN  T   ++  C  L  L LG+++  ++ +
Sbjct: 432  NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491

Query: 268  LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
             G + N  + + L+DMY K G +  A ++     + ++V    +++ YV+  +  EAL +
Sbjct: 492  TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQL 551

Query: 328  LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             +EM   G + D +   SA+SA A +  L  G+  H      G     SI N +I +Y +
Sbjct: 552  FEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYAR 611

Query: 388  CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
            CG+                               ++ A   F ++  +++ISWN+++ GL
Sbjct: 612  CGR-------------------------------IQEAYLAFEKIGDKNNISWNSLVSGL 640

Query: 448  TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
             Q   FEEA+++F  ML    +V+  T     SA   L  +   + I++ + K G   + 
Sbjct: 641  AQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSER 700

Query: 508  QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            +++ +L+ ++A+ G    A + F  M +R+V +W A I   +  G G +A+ LF EM   
Sbjct: 701  EVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVC 760

Query: 568  GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
            GI P+ + FVGVL+ACSH GLV +G   F SM  IH + P+  HY C+VDLLGRAG L  
Sbjct: 761  GIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDR 820

Query: 628  ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
            A++ IK MP+  + +IW +LL+AC  H+N++I   AA  + EL+PE S  +VL+SNIYA 
Sbjct: 821  AMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAV 880

Query: 688  AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
            + +W +    R  MK+ G++K PG S IEV   VH F +GD+ HP  N I   +  +N R
Sbjct: 881  SRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRR 940

Query: 748  LRDAGYVPDLTNVLLDVDEQEKKYLLSH-HSEKLAMAFGLISTSKTMPIRVVKNLRLCCD 806
              + GYV D +  LL+  EQ +K  ++H HSEKLA+AFGL+S    +PIRV+KNLR+C D
Sbjct: 941  TSEIGYVQD-SFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCND 999

Query: 807  CHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            CH++ K VSK+ +R IIVRD +RFH F  G CSC DFW
Sbjct: 1000 CHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 286/616 (46%), Gaps = 45/616 (7%)

Query: 39  LKNCKT---LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L+ C T   L E  + HC I K G   +P  I  +V    + G       A K FD    
Sbjct: 65  LEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHG---AVKVFD---- 117

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS-AF 154
              ++ ++F +N +I  +       +   L+  +   GI P+ +TF  VL AC     AF
Sbjct: 118 -ENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAF 176

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
               QVH      GFD    V N LI+ Y + G I   ++VF+ +  +++V+W ++I   
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           ++  L +EA+ LF +M    I P    +  V+SA  K+Q  ELG+++   + + G  +  
Sbjct: 237 SQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + N LV +Y +   + +A+++F     R+ V  N+++S  V+ G +  AL +  +M   
Sbjct: 297 YVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD 356

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
             +PD +T+ S +SA A +G L  G   H + ++ G+     +  +++D+Y KC   E A
Sbjct: 357 CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETA 416

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            + F     + +V W                               N ML    Q +   
Sbjct: 417 HKFFLXTETENIVLW-------------------------------NVMLVAYGQLDNLS 445

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           ++ E+FR M  E +  ++ T   +   C  LGAL L + I+ ++ K G   ++ + + L+
Sbjct: 446 DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLI 505

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+A+ G    A+++ RR+ + DV +WTA I          +A++LF EM  +GI+ D+I
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNI 565

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F   ++AC+    + QG  +  + +   G    +     ++ L  R G + EA    + 
Sbjct: 566 GFASAISACAGIRALRQGQQI-HAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624

Query: 635 MPVEPNDVIWGSLLAA 650
           +  + N++ W SL++ 
Sbjct: 625 IG-DKNNISWNSLVSG 639



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 259/548 (47%), Gaps = 53/548 (9%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+  +   + ++L  C  S +  E +++H  I K GFD +  + + L++ Y   GD    
Sbjct: 53  GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            +VFDE S R+V SW  +I     +    +   LF  M+ EGI PN  T   V+ AC   
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG- 171

Query: 253 QNLELGDRVCAYIDEL-------GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
                GD    Y+ ++       G  ++ L+ N L+D+Y K G +++AK++F     +++
Sbjct: 172 -----GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDI 226

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V    ++S   + GL  EA+ +  +M      P    + S +SAS ++     G   H  
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           V++ G      +CN ++ +Y +  K   A RIF  M+++  VS+NSLI+GL++ G     
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG----- 341

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
              FS                       + A+ELF  M  + +K D +T+  + SAC  +
Sbjct: 342 ---FS-----------------------DRALELFTKMQRDCLKPDCITVASLLSACASV 375

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
           GAL     ++++  K G+  D+ L  +L+D++++C D + A + F   E  ++  W   +
Sbjct: 376 GALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVML 435

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
            A     N   + E+F +M  +G+ P+   +  +L  C+  G +  G  +    T +   
Sbjct: 436 VAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH---THVIKT 492

Query: 606 SPQIVHYGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
             Q+  Y C  ++D+  + G L  AL +++ +P E + V W +++A   +H   D+ + A
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH---DMFSEA 548

Query: 664 AERITELD 671
            +   E++
Sbjct: 549 LQLFEEME 556



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 148/366 (40%), Gaps = 75/366 (20%)

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           + +++ M   G R +    L  +      G L      H  + ++G +G   + ++++D 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y + G Q  A ++FD  SN++V SWN +I   +     +S  +VF               
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ---KSNFQVFC-------------- 145

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC-GYLGALDLAKWIYAYIEKNGI 503
                         LFR ML+E I  +  T  GV  AC G   A +  K +++     G 
Sbjct: 146 --------------LFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGF 191

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
                +A  L+D++++ G  + A +VF  +  +D+  W A I  ++  G  E+A+ LF +
Sbjct: 192 DSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCD 251

Query: 564 MLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWH------------------ 594
           M    I P   V   VL+A +           H  ++  G+H                  
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311

Query: 595 ------LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWG 645
                 +F +M    GVS     Y  ++  L + G    AL+L   M    ++P+ +   
Sbjct: 312 LISAERIFSTMNSRDGVS-----YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVA 366

Query: 646 SLLAAC 651
           SLL+AC
Sbjct: 367 SLLSAC 372


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/767 (34%), Positives = 412/767 (53%), Gaps = 42/767 (5%)

Query: 74   CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
            C  MG+      A++ FD       +   + ++N ++ GY+      E++ L+ ++   G
Sbjct: 356  CGDMGS------ARRVFDAM----PSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELG 405

Query: 134  ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
            I PD+     +L   T  S   +G+  HG +VK+GF     V N LI+FY +   I +  
Sbjct: 406  ITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAV 465

Query: 194  RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
             VFD M  ++ +SW S+I  C    L  EA+ LF  M  +G + +S T++ V+ ACA+  
Sbjct: 466  LVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSH 525

Query: 254  NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
               +G  V  Y  + G+     + NAL+DMY  C    +  Q+F     +N+V    +++
Sbjct: 526  YWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMIT 585

Query: 314  NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            +Y R GL  +   +L EM+L G +PD   + S +   A    L  G+  HGY +RNG+E 
Sbjct: 586  SYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEK 645

Query: 374  WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
               + N +++MY+ C                                ++E AR VF  + 
Sbjct: 646  LLPVANALMEMYVNCR-------------------------------NMEEARLVFDHVT 674

Query: 434  GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
             +D ISWNT++GG ++ N   E+  LF  ML +  K + VTM  +  A   + +L+  + 
Sbjct: 675  NKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGRE 733

Query: 494  IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
            I+AY  + G   D   + ALVDM+ +CG    A  +F R+ K+++ +WT  I    M G 
Sbjct: 734  IHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGC 793

Query: 554  GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
            G+ AV LF +M   G++PD+  F  +L AC H GL  +GW  F +M   + + P++ HY 
Sbjct: 794  GKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYT 853

Query: 614  CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
            C+VDLL   G L EA + I+SMP+EP+  IW SLL  C+ H++V +A   A+R+ +L+PE
Sbjct: 854  CIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPE 913

Query: 674  KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             +G +VLL+NIYA A +W  V +++ ++  +G+R+  G S IEV GKVH F + + +HPE
Sbjct: 914  NTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPE 973

Query: 734  MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
             N I+  L  +  R+R+ G+ P     L+  ++      L  HS KLA+ FG++   +  
Sbjct: 974  WNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGR 1033

Query: 794  PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
            PIRV KN ++C  CH  AK +SK+ +REII+RD++RFH F  G CSC
Sbjct: 1034 PIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 205/806 (25%), Positives = 331/806 (41%), Gaps = 122/806 (15%)

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
           A + ++ SL+  Y+  G   E +SL+ ++   G+ PD      VL       +  EG  +
Sbjct: 161 ADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVI 220

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           HG + K+G      V N LI  Y  CG + D  +VFD M  R+ +SW S I         
Sbjct: 221 HGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWH 280

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
             AV LF +M  EG + +SVT++ V+ ACA+L    +G  V  Y  + G+  +   V + 
Sbjct: 281 DRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSG 340

Query: 281 VD---------MYMKCGAVDTAKQLFGECKDR-NLVLCNTIMSNYVRLGLAREALAILDE 330
           +D         MY+KCG + +A+++F     + N+ + N IM  Y +     E+L + ++
Sbjct: 341 IDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQ 400

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M   G  PD   +   +     L     G + HGY+++ G     ++CN +I  Y K   
Sbjct: 401 MHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNM 460

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            + A  +FD M ++  +SWNS+I+G   NG                              
Sbjct: 461 IDNAVLVFDRMPHQDTISWNSVISGCTSNG------------------------------ 490

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
            +  EA+ELF  M  +  ++D  T++ V  AC       + + ++ Y  K G+  +  LA
Sbjct: 491 -LNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLA 549

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            AL+DM++ C D     Q+FR M +++V +WTA I +    G  ++   L  EM+  GIK
Sbjct: 550 NALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIK 609

Query: 571 PDSIVFVGVLTACS-----------HGGLVNQGWHLF--------------RSMTDI--- 602
           PD      VL   +           HG  +  G                  R+M +    
Sbjct: 610 PDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLV 669

Query: 603 --HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE--PNDVIWGSLLAACQK----H 654
             H  +  I+ +  ++    R     E+  L   M ++  PN V    +L A        
Sbjct: 670 FDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISSLE 729

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +  +I AYA  R    D   S     L ++Y   G    VARV   + ++  +K   S +
Sbjct: 730 RGREIHAYALRRGFLEDSYTSNA---LVDMYVKCGALL-VARV---LFDRLTKKNLISWT 782

Query: 715 IEVNG-----------KVHEFTSGDESHPEMNNISSML-------------REMNCRLRD 750
           I + G            + E   G    P+  + S++L             +  N   ++
Sbjct: 783 IMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKE 842

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIR----VVKNLRLCCD 806
               P L +    VD      LLS H+  L  AF  I   ++MPI     +  +L   C 
Sbjct: 843 YKIEPKLKHYTCIVD------LLS-HTGNLKEAFEFI---ESMPIEPDSSIWVSLLHGCR 892

Query: 807 CHSFAKLVSKVYDREIIVRDNNRFHF 832
            H   KL  KV DR   +   N  ++
Sbjct: 893 IHRDVKLAEKVADRVFKLEPENTGYY 918



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 220/508 (43%), Gaps = 85/508 (16%)

Query: 179 LINFYGECGDIVDGRRVFDEMSER--NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           L+  Y +CGD+   R VFDEM  R  +V  WTSL+ A A+    +E V LF +M   G+ 
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P++  + CV+   A L ++  G+ +   +++LG+     + NAL+ +Y +CG ++ A Q+
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F     R+ +  N+ +S Y   G    A+ +  +M   G     VT+LS + A A+LG  
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFE 315

Query: 357 LCGRMCHGYVLRNGLEGWD----------SICNTMIDMYMKCGKQEMACRIFDHMSNK-T 405
           L G++ HGY +++GL  WD          ++ + ++ MY+KCG    A R+FD M +K  
Sbjct: 316 LVGKVVHGYSMKSGLL-WDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V  WN ++ G  K  +                               FEE++ LF  M  
Sbjct: 375 VHVWNLIMGGYAKAAE-------------------------------FEESLLLFEQMHE 403

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             I  D   +  +      L         + Y+ K G      +  AL+  +A+      
Sbjct: 404 LGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDN 463

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS- 584
           A+ VF RM  +D  +W + I      G   +A+ELF  M  QG + DS   + VL AC+ 
Sbjct: 464 AVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACAR 523

Query: 585 ----------HGGLVNQG--------------------WH----LFRSMTDIHGVSPQIV 610
                     HG  V  G                    WH    +FR+M         +V
Sbjct: 524 SHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQ-----KNVV 578

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVE 638
            +  M+    RAGL  +   L++ M ++
Sbjct: 579 SWTAMITSYTRAGLFDKVAGLLQEMVLD 606



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 12/285 (4%)

Query: 412 LIAGLIKNGDVESAREVFSEMPGR--DHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           L+   +K GD+  AR VF EMP R  D   W +++    +   F+E + LFR M    + 
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +  V      LG++   + I+  +EK G+     +A AL+ +++RCG  + AMQV
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL- 588
           F  M  RD  +W + I      G  ++AV+LF++M  +G +  S+  + VL AC+  G  
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFE 315

Query: 589 ----VNQGWHLFRSMT-DIHGVSPQIVHY--GCMVDLLGRAGLLGEALDLIKSMPVEPND 641
               V  G+ +   +  D+  V   I       +V +  + G +G A  +  +MP + N 
Sbjct: 316 LVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNV 375

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITEL--DPEKSGVHVLLSNI 684
            +W  ++    K    + +    E++ EL   P++  +  LL  I
Sbjct: 376 HVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCI 420


>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/513 (45%), Positives = 331/513 (64%), Gaps = 32/513 (6%)

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           L   RPD VTM+S V A AQLG+L  G++ H Y    GL+   S+ N ++DMY KC    
Sbjct: 4   LDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCD--- 60

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
                                       D+ESA+EVF+ +  +D +SW +ML GL +   
Sbjct: 61  ----------------------------DIESAQEVFNRIREKDVLSWTSMLSGLAKSGY 92

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           F+E++ LFR M   +I+ D +T+VGV SAC   GALD  K+I+  I+K  I+CD+ L TA
Sbjct: 93  FQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETA 152

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           LVDM+A+CG    A+QVFRRM  R+V  W A IG +AM G+GE A+ LF++M    + PD
Sbjct: 153 LVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPD 212

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + F+ +L ACSH GLV++G  +F++M +   + P++ HYGC+VDLL RA  + +AL  I
Sbjct: 213 DVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFI 272

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           ++MP++ N V+W +LL AC+   + D+A     R+ EL+P+  G +V+LSN+YA   +W 
Sbjct: 273 ENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWD 332

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR-DA 751
           +  ++R QMK +GI K PG S IE+NG +H+F +GD SH +   I +M+ EM  R+  D 
Sbjct: 333 HALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDG 392

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           G+VP   NVL D++E+EK++ L  HSEKLA+A GLIST    PIR+VKNLR+C DCHSF 
Sbjct: 393 GHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFL 452

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+ SKVY+REI+ RD +RFH F++GSCSC DFW
Sbjct: 453 KVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 170/343 (49%), Gaps = 35/343 (10%)

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
           + ++P+ VTMV ++ ACA+L NLE G  + +Y  ELG+  N  + NA++DMY KC  +++
Sbjct: 5   DNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIES 64

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A+++F   ++++++   +++S   + G  +E+LA+  +M LH   PD +T++  +SA AQ
Sbjct: 65  AQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQ 124

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
            G L  G+  H  + +  +     +   ++DMY KCG  ++A ++F  M  + V +WN++
Sbjct: 125 TGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAM 184

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I GL  +G                                 E+A+ LF  M  +++  D 
Sbjct: 185 IGGLAMHGH-------------------------------GEDAISLFDQMEXDKLMPDD 213

Query: 473 VTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           VT + +  AC + G +D    ++ A   K  I   M+    +VD+  R      A+    
Sbjct: 214 VTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIE 273

Query: 532 RME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            M  K +   W   +GA    G+ + A ++   ++   ++PDS
Sbjct: 274 NMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIE--LEPDS 314



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 122/219 (55%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD+ T   ++ AC +      G  +H    ++G D ++ V N +++ Y +C DI   + V
Sbjct: 9   PDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEV 68

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           F+ + E++V+SWTS++   A+    +E++ LF +M    I+P+ +T+V V+SACA+   L
Sbjct: 69  FNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGAL 128

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           + G  +   ID+  +  + ++  ALVDMY KCG++D A Q+F   + RN+   N ++   
Sbjct: 129 DQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGL 188

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
              G   +A+++ D+M      PD VT ++ + A +  G
Sbjct: 189 AMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAG 227



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 11/186 (5%)

Query: 76  QMGTFESLTYAQKAFDYYIK--DNETSATLF---------MYNSLIRGYSCIGLGVEAIS 124
           ++G  E+L+      D Y K  D E++  +F          + S++ G +  G   E+++
Sbjct: 39  ELGLDENLSVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLA 98

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L+ ++    I PD+ T   VL+AC ++ A  +G  +H  I K   + D+ +E  L++ Y 
Sbjct: 99  LFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYA 158

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG I    +VF  M  RNV +W ++I   A     ++A+ LF +M  + + P+ VT + 
Sbjct: 159 KCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIA 218

Query: 245 VISACA 250
           ++ AC+
Sbjct: 219 LLCACS 224



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
            +F +N++I G +  G G +AISL+ ++    ++PD  TF  +L AC+ +    EG+ + 
Sbjct: 177 NVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMF 236

Query: 162 GAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
            A+ K  F  +  +E+  C+++       + D     + M  + N V W +L+ AC
Sbjct: 237 QAM-KNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGAC 291


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/796 (33%), Positives = 432/796 (54%), Gaps = 49/796 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFT 140
           SL+ A++ F    + + TS     +N+L+ GY   G  ++A+  +V +   G  LP+ FT
Sbjct: 110 SLSDAEELFGRMPRRDVTS-----WNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFT 164

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI----------- 189
           F   + +C         +Q+ G + K GF  D  V   +++ +  CG +           
Sbjct: 165 FGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIE 224

Query: 190 -------------------VD-GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
                              VD    +F+ M ER+VVSW  ++ A ++    +EA+ +  +
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M   G++ +S T    ++ACAKL +L  G ++ A +       +  + +A+V++Y KCG 
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
              A+++F   +DRN V    ++  +++ G   E+L + ++M       D+  + + +S 
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            +   D+   R  H   L++G      I N++I MY KCG  + A  IF  M  + +VSW
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-I 468
             ++    + G++  ARE F  M  R+ I+WN MLG   Q    E+ ++++  ML+E+ +
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDV 524

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             D VT V +   C  +GA  L   I  +  K G+  D  +  A++ M+++CG    A +
Sbjct: 525 IPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARK 584

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F  + ++D+ +W A I   +  G G+QA+E+F++ML++G KPD I +V VL++CSH GL
Sbjct: 585 IFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGL 644

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V +G   F  +   H VSP + H+ CMVDLL RAG L EA +LI  MP++P   +WG+LL
Sbjct: 645 VQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALL 704

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           +AC+ H N ++A  AA+ + +LD   SG ++LL+ IYA AGK  + A+VR  M+++GI+K
Sbjct: 705 SACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKK 764

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG S +EV  KVH F + D SHP++  I   L E+  ++   GYV             E
Sbjct: 765 NPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYV-----------RTE 813

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
                 HHSEKLA+AFG+++    MPI ++KNLR+C DCH+  KL+S V  RE ++RD  
Sbjct: 814 SLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAV 873

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F+ GSCSC D+W
Sbjct: 874 RFHHFKGGSCSCGDYW 889



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 229/533 (42%), Gaps = 101/533 (18%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR----------- 193
           L +C    A      +HG +V +G    VF++N L++ Y  CG + D R           
Sbjct: 35  LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94

Query: 194 ---------------------RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
                                 +F  M  R+V SW +L+    +     +A+  F  M  
Sbjct: 95  VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154

Query: 233 EGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            G   PN+ T  C + +C  L   E+  ++   + + G + +  +   +VDM+++CGAVD
Sbjct: 155 SGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVD 214

Query: 292 TAK-------------------------------QLFGECKDRNLVLCNTIMSNYVRLGL 320
            A                                +LF    +R++V  N ++S   + G 
Sbjct: 215 FASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGR 274

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS-ICN 379
           AREAL++  +M   G R D  T  S+++A A+L  L  G+  H  V+R+ L   D  + +
Sbjct: 275 AREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS-LPCIDPYVAS 333

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            M+++Y KCG  + A R+F  + ++  VSW  LI G ++ G                   
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYG------------------- 374

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                        F E++ELF  M +E + VD+  +  + S C     + LA+ +++   
Sbjct: 375 ------------CFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSL 422

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K+G    + ++ +L+ M+A+CG+ Q A  +F  ME+RD+ +WT  + A +  GN  +A E
Sbjct: 423 KSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKARE 482

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            F+ M  + +    I +  +L A    G    G  ++ +M     V P  V Y
Sbjct: 483 FFDGMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTY 531



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 192/393 (48%), Gaps = 11/393 (2%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N +  N +++ Y K G++  A++LFG    R++   NT+MS Y + G   +A+     M 
Sbjct: 94  NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153

Query: 333 LHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
             G   P+  T   A+ +   LG         G + + G +G   +   ++DM+++CG  
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           + A + F  +   TV   NS++AG  K+  V+ A E+F  MP RD +SWN M+  L+Q  
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSG 273

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+ +   M +  +++D  T     +AC  L +L   K ++A + ++    D  +A+
Sbjct: 274 RAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS 333

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           A+V+++A+CG  + A +VF  +  R+  +WT  IG     G   +++ELFN+M  + +  
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTV 393

Query: 572 DSIVFVGVLTACSHGG---LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           D      +++ CS+     L  Q      S++   G +  +V    ++ +  + G L  A
Sbjct: 394 DQFALATIISGCSNRMDMCLARQ----LHSLSLKSGHTRAVVISNSLISMYAKCGNLQNA 449

Query: 629 LDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
             +  SM  E  D++ W  +L A  +  N+  A
Sbjct: 450 ESIFSSM--EERDIVSWTGMLTAYSQVGNIGKA 480



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 142/327 (43%), Gaps = 47/327 (14%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF-DHMSNKTVVSWNSLIAGLIKNGD 421
           HG ++  GL     + NT++  Y+ CG    A  +    ++   V++ N ++ G  K G 
Sbjct: 51  HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA-S 480
           +  A E+F  MP RD  SWNT++ G  Q   F +AME F  M      +      G A  
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG------------------- 521
           +CG LG  ++A  +   + K G   D  +AT +VDMF RCG                   
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230

Query: 522 ------------DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
                           A+++F  M +RDV +W   + A++  G   +A+ +  +M  +G+
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV 290

Query: 570 KPDSIVFVGVLTACSHGGLVNQGW------HLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           + DS  +   LTAC+   L + GW       + RS+  I    P +     MV+L  + G
Sbjct: 291 RLDSTTYTSSLTACAK--LSSLGWGKQLHAQVIRSLPCI---DPYVA--SAMVELYAKCG 343

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAA 650
              EA  +  S+  + N V W  L+  
Sbjct: 344 CFKEARRVFSSLR-DRNTVSWTVLIGG 369


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 281/821 (34%), Positives = 435/821 (52%), Gaps = 67/821 (8%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISKVV-------CTCAQMGTFESLTYAQK 88
           LK C  L +L Q    H  I++ GL  K    + ++       C  + M  FE +     
Sbjct: 135 LKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDLV 194

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC 148
           +++  I  N  S  L M                A+ L+  +   G+ P + T    L+ C
Sbjct: 195 SWNAAIAANAQSGDLDM----------------ALELFQRMQLEGVRPARITLVITLSVC 238

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
            K     +   +H  + + G ++ + V   L + Y   G +   + VFD  +ER+VVSW 
Sbjct: 239 AK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWN 295

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           +++ A A+     EA  LF  M+ EGI P+ VT+V   + C+ L+    G  + A   E 
Sbjct: 296 AMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLR---FGRMIHACALEK 352

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G+  + ++ NAL+DMY +CG+ + A+ LF E    N V  NT+++   + G  + AL + 
Sbjct: 353 GLDRDIVLGNALLDMYTRCGSPEEARHLF-EGIPGNAVSWNTMIAGSSQKGQMKRALELF 411

Query: 329 DEMLLHGPRPDRVT---MLSAVSASAQLGDLLC-GRMCHGYVLRNGLEGWDSICNTMIDM 384
             M L G  P R T   +L AV+++ +    +  GR  H  ++  G     +I   ++ M
Sbjct: 412 QRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKM 471

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y  CG  + A   F                   + G +E   +V         +SWN ++
Sbjct: 472 YASCGAIDEAAASF-------------------QRGAMEDRHDV---------VSWNAII 503

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
             L+Q    + A+  FR M    +  +++T V V  AC    AL     ++ ++  +G+ 
Sbjct: 504 SSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGME 563

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
            ++ +ATAL  M+ RCG  + A ++F ++  +RDV  + A I A +  G   +A++LF  
Sbjct: 564 SNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWR 623

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M ++G +PD   FV VL+ACSHGGL ++GW +FRSM   +G++P   HY C VD+LGRAG
Sbjct: 624 MQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAG 683

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L +A +LI+ M V+P  ++W +LL AC+K+++VD    A   + ELDP     +V+LSN
Sbjct: 684 WLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSN 743

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           I A AGKW   A VR +M+ +G+RK  G S IE+  +VHEF +GD SHP    I   L  
Sbjct: 744 ILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELER 803

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           ++  +R+ GYVPD   VL  VDE EK+ LL  HSE+LA+A G++S+S T  +RV+KNLR+
Sbjct: 804 LHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS-TDTVRVMKNLRV 862

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH+  K +SK+ ++EI+VRD +RFH F  GSCSC D+W
Sbjct: 863 CEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 171/621 (27%), Positives = 290/621 (46%), Gaps = 69/621 (11%)

Query: 43  KTLNELKQPHCHILKQGLGHK-PSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           + L++ ++ H  I+  GL  +  +++ ++   C  +G  E +      F      +E S 
Sbjct: 43  RLLSQGRRIHARIVSLGLEEELGNHLLRLYLKCESLGDVEEV------FSRLEVRDEAS- 95

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               + ++I  Y+  G    AI ++  +   G+  D  TF  VL AC +     +G  +H
Sbjct: 96  ----WTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             IV+ G +    + N L++ YG CG +     +F+ M ER++VSW + I A A+     
Sbjct: 152 AWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLD 210

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            A+ LF  M  EG++P  +T+V  +S CAK++       + + + E G++   ++  AL 
Sbjct: 211 MALELFQRMQLEGVRPARITLVITLSVCAKIRQARA---IHSIVRESGLEQTLVVSTALA 267

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
             Y + G +D AK++F    +R++V  N ++  Y + G   EA  +   ML  G  P +V
Sbjct: 268 SAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKV 327

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+   V+AS     L  GRM H   L  GL+    + N ++DMY +CG  E A  +F+ +
Sbjct: 328 TL---VNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI 384

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL-----TQENMFEEA 456
                VSWN++IAG  + G ++ A E+F  M           L G+     T  N+ E  
Sbjct: 385 PG-NAVSWNTMIAGSSQKGQMKRALELFQRM----------QLEGMAPVRATYLNLLE-- 431

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
                                VAS      A+   + +++ I   G   +  + TA+V M
Sbjct: 432 --------------------AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKM 471

Query: 517 FARCGDPQRAMQVFRR--MEKR-DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +A CG    A   F+R  ME R DV +W A I +++  G+G++A+  F  M   G+ P+ 
Sbjct: 472 YASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQ 531

Query: 574 IVFVGVLTACSHGGLVNQGW----HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           I  V VL AC+    + +G     HL  S     G+   +     +  + GR G L  A 
Sbjct: 532 ITCVAVLDACAGAAALTEGVIVHDHLRHS-----GMESNVFVATALASMYGRCGSLESAR 586

Query: 630 DLIKSMPVEPNDVIWGSLLAA 650
           ++ + + VE + VI+ +++AA
Sbjct: 587 EIFEKVAVERDVVIFNAMIAA 607



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 242/522 (46%), Gaps = 58/522 (11%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L A        +G ++H  IV +G + ++   N L+  Y +C  + D   VF  +  R+
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
             SWT++I A       K A+++F  M +EG++ ++VT + V+ ACA+L +L  G  + A
Sbjct: 93  EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           +I E G++  +++ N L+ +Y  CG V +A  LF E  +R+LV  N  ++   + G    
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLF-ERMERDLVSWNAAIAANAQSGDLDM 211

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +   M L G RP R+T++  +S  A++      R  H  V  +GLE    +   +  
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVSTALAS 268

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
            Y + G  + A  +FD  + + VVSWN+                               M
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNA-------------------------------M 297

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           LG   Q     EA  LF  ML E I   +VT+V  ++ C    +L   + I+A   + G+
Sbjct: 298 LGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC---SSLRFGRMIHACALEKGL 354

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D+ L  AL+DM+ RCG P+ A  +F  +    VS W   I   + +G  ++A+ELF  
Sbjct: 355 DRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAVS-WNTMIAGSSQKGQMKRALELFQR 413

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG---------C 614
           M  +G+ P    ++ +L A      V       R+M +   +  +IV  G          
Sbjct: 414 MQLEGMAPVRATYLNLLEA------VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTA 467

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEP-NDVI-WGSLLAACQKH 654
           +V +    G + EA    +   +E  +DV+ W +++++  +H
Sbjct: 468 VVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQH 509


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/815 (32%), Positives = 422/815 (51%), Gaps = 101/815 (12%)

Query: 100  SATLFMYNSLIRGYSCIGLGVE-----------AISLYVELAGFGILPDKFTFPFVLNAC 148
            SA +  Y  L R Y      VE            + ++ EL G G++ D   +   L  C
Sbjct: 625  SAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTC 684

Query: 149  TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
            T+      G+++HG ++K GFD DV++   L+NFYG C  +    +VF EM     + W 
Sbjct: 685  TRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWN 744

Query: 209  SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
              I    + +  ++ V LF +M    +K  + T+V V+ AC K+  L    ++  Y+   
Sbjct: 745  EAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRF 804

Query: 269  GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL-------- 320
            G+ ++  + N L+ MY K G ++ A+++F   ++RN    N+++S+Y  LG         
Sbjct: 805  GLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLF 864

Query: 321  ---------------------------AREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
                                         E L IL  M   G +P+  +M S + A ++L
Sbjct: 865  YELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISEL 924

Query: 354  GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
            G L  G+  HGYVLRNG +    +  ++IDMY                            
Sbjct: 925  GFLNMGKETHGYVLRNGFDCDVYVGTSLIDMY---------------------------- 956

Query: 414  AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
               +KN  + SA+ VF  M  R+  +WN+++ G + + MFE+A+ L   M  E IK D V
Sbjct: 957  ---VKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLV 1013

Query: 474  TMVGVAS------------------------ACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
            T  G+ S                        AC  L  L   K I+    +NG   D+ +
Sbjct: 1014 TWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFV 1073

Query: 510  ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
            ATAL+DM+++    + A +VFRR++ + +++W   I   A+ G G++A+ +FNEM + G+
Sbjct: 1074 ATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGV 1133

Query: 570  KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
             PD+I F  +L+AC + GL+ +GW  F SM   + + P++ HY CMVDLLGRAG L EA 
Sbjct: 1134 GPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAW 1193

Query: 630  DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
            DLI +MP++P+  IWG+LL +C+ H+N+  A  AA+ + +L+P  S  ++L+ N+Y+   
Sbjct: 1194 DLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFN 1253

Query: 690  KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
            +W ++  +R  M   G+R     S I++N +VH F+S ++ HP+   I   L ++   ++
Sbjct: 1254 RWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMK 1313

Query: 750  DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
              GYVPD+  V  ++DE EK+ +L  H+EKLA+ +GLI      PIRV+KN R+C DCHS
Sbjct: 1314 KLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHS 1373

Query: 810  FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             AK +S V  RE+ +RD  RFH FR+G CSC+DFW
Sbjct: 1374 AAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 202/414 (48%), Gaps = 5/414 (1%)

Query: 179  LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY-LFFEMVEEGIKP 237
            LI+ Y   GD      VF     RN + W S +            V  +F E+  +G+  
Sbjct: 613  LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 672

Query: 238  NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
            +S      +  C ++ ++ LG  +   + + G   +  +  AL++ Y +C  ++ A Q+F
Sbjct: 673  DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 732

Query: 298  GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
             E  +   +L N  +   ++    ++ + +  +M     + +  T++  + A  ++G L 
Sbjct: 733  HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALN 792

Query: 358  CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
              +  HGYV R GL+   S+CN +I MY K GK E+A R+FD M N+   SWNS+I+   
Sbjct: 793  AAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYA 852

Query: 418  KNGDVESAREVFSEMPGRDH----ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
              G +  A  +F E+   D     ++WN +L G       EE + + + M  E  K +  
Sbjct: 853  ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 912

Query: 474  TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
            +M  V  A   LG L++ K  + Y+ +NG  CD+ + T+L+DM+ +      A  VF  M
Sbjct: 913  SMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNM 972

Query: 534  EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            + R++ AW + +   + +G  E A+ L N+M ++GIKPD + + G+++  +  G
Sbjct: 973  KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 192/462 (41%), Gaps = 98/462 (21%)

Query: 44   TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
             LN  KQ H ++ + GL    S  + ++   ++ G  E    A++ FD     N +S   
Sbjct: 790  ALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLE---LARRVFDSMENRNTSS--- 843

Query: 104  FMYNSLIRGYSCIGLGVEAISLYVEL---------------------------------- 129
              +NS+I  Y+ +G   +A SL+ EL                                  
Sbjct: 844  --WNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQR 901

Query: 130  -AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
              G G  P+  +   VL A ++      G + HG +++ GFD DV+V   LI+ Y +   
Sbjct: 902  MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 961

Query: 189  IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK------------ 236
            +   + VFD M  RN+ +W SL+   + + + ++A+ L  +M +EGIK            
Sbjct: 962  LXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 1021

Query: 237  ------------PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
                        PNS ++ C++ ACA L  L+ G  +       G   +  +  AL+DMY
Sbjct: 1022 YAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMY 1081

Query: 285  MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
             K  ++  A ++F   +++ L   N ++  +   GL +EA+++ +EM   G  PD +T  
Sbjct: 1082 SKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFT 1141

Query: 345  SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            + +SA    G  L G            EGW    ++MI  Y    + E  C + D +   
Sbjct: 1142 ALLSACKNSG--LIG------------EGWKYF-DSMITDYRIVPRLEHYCCMVDLLG-- 1184

Query: 405  TVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLG 445
                         + G ++ A ++   MP + D   W  +LG
Sbjct: 1185 -------------RAGYLDEAWDLIHTMPLKPDATIWGALLG 1213



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 132/320 (41%), Gaps = 22/320 (6%)

Query: 409 WN------SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL-TQENMFEEAMELFR 461
           WN      +LI+  +  GD  SA  VF     R+++ WN+ +    +        +E+F+
Sbjct: 604 WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFK 663

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            +  + +  D          C  +  + L   I+  + K G   D+ L  AL++ + RC 
Sbjct: 664 ELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW 723

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             ++A QVF  M   +   W  AI         ++ VELF +M    +K ++   V VL 
Sbjct: 724 GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQ 783

Query: 582 ACSHGGLVNQG----WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           AC   G +N       ++FR      G+   +     ++ +  + G L  A  +  SM  
Sbjct: 784 ACGKMGALNAAKQIHGYVFR-----FGLDSDVSLCNPLISMYSKNGKLELARRVFDSME- 837

Query: 638 EPNDVIWGSLLA--ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
             N   W S+++  A     N   + +     +++ P+    + LLS  +    K   V 
Sbjct: 838 NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYK-EEVL 896

Query: 696 RVRLQMKEQGIRKLPGSSSI 715
            +  +M+ +G +  P SSS+
Sbjct: 897 NILQRMQGEGFK--PNSSSM 914


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 279/812 (34%), Positives = 444/812 (54%), Gaps = 46/812 (5%)

Query: 39  LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  L +++   + H  ++K G  H   +I  V    +     + L+ A++ FD + +
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGY-HSTGFI--VNALVSMYAKNDDLSAARRLFDGFQE 245

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
             +      ++NS++  YS  G  +E + L+ E+   G  P+ +T    L AC   S   
Sbjct: 246 KGDA----VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301

Query: 156 EGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
            G ++H +++K      +++V N LI  Y  CG +    R+  +M+  +VV+W SLI   
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +  + KEA+  F +M+  G K + V+M  +I+A  +L NL  G  + AY+ + G  +N 
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + N L+DMY KC       + F    D++L+   T+++ Y +     EAL +  ++   
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEM 393
               D + + S + AS+ L  +L  +  H ++LR GL   D++  N ++D+Y KC     
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL--LDTVIQNELVDVYGKCRNMGY 539

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A R+F+                                + G+D +SW +M+         
Sbjct: 540 ATRVFE-------------------------------SIKGKDVVSWTSMISSSALNGNE 568

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
            EA+ELFR M+   +  D V ++ + SA   L AL+  + I+ Y+ + G   +  +A A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VDM+A CGD Q A  VF R+E++ +  +T+ I A  M G G+ AVELF++M  + + PD 
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I F+ +L ACSH GL+++G    + M   + + P   HY C+VD+LGRA  + EA + +K
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVK 748

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
            M  EP   +W +LLAAC+ H   +I   AA+R+ EL+P+  G  VL+SN++A  G+W +
Sbjct: 749 MMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWND 808

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL-RDAG 752
           V +VR +MK  G+ K PG S IE++GKVH+FT+ D+SHPE   I   L E+  +L R+ G
Sbjct: 809 VEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVG 868

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           YV D   VL +VDE EK  +L  HSE++A+A+GL+ T     +R+ KNLR+C DCH+F K
Sbjct: 869 YVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCK 928

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LVSK++ R+I++RD NRFH F  G CSC D W
Sbjct: 929 LVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 313/648 (48%), Gaps = 82/648 (12%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           + +++ +Q H  I K     +  +++ K+V    + G   SL  A+K FD          
Sbjct: 94  RAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCG---SLDDAEKVFD-----EMPDR 145

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T F +N++I  Y   G    A++LY  +   G+     +FP +L AC K      G ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICACARRDLP 220
             +VK+G+    F+ N L++ Y +  D+   RR+FD   E+ + V W S++ + +     
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NA 279
            E + LF EM   G  PNS T+V  ++AC      +LG  + A + +    ++ L V NA
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+ MY +CG +  A+++  +  + ++V  N+++  YV+  + +EAL    +M+  G + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMYMKCGKQEMACR 396
            V+M S ++AS +L +LL G   H YV+++   GWDS   + NT+IDMY KC       R
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKH---GWDSNLQVGNTLIDMYSKCNLTCYMGR 442

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
            F  M +K ++SW ++IAG  +N                               +   EA
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQN-------------------------------DCHVEA 471

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +ELFR +  +R+++D + +  +  A   L ++ + K I+ +I + G+  D  +   LVD+
Sbjct: 472 LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDV 530

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +C +   A +VF  ++ +DV +WT+ I + A+ GN  +AVELF  M+  G+  DS+  
Sbjct: 531 YGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590

Query: 577 VGVLTACSHGGLVNQGW----HLFR-----------SMTDIHGVSPQIVHYGCMVDLLGR 621
           + +L+A +    +N+G     +L R           ++ D++     +     + D + R
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650

Query: 622 AGLLG------------------EALDLIKSMPVEPNDVIWGSLLAAC 651
            GLL                   E  D ++   V P+ + + +LL AC
Sbjct: 651 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYAC 698



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 267/554 (48%), Gaps = 57/554 (10%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKM--GFDRDVFVENCLINFYGECGDIVDGRRVFD 197
            F +VL  C K  A  +G Q+H  I K    F+ D F+   L+  YG+CG + D  +VFD
Sbjct: 82  AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
           EM +R   +W ++I A      P  A+ L++ M  EG+     +   ++ ACAKL+++  
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR-NLVLCNTIMSNYV 316
           G  + + + +LG  +   +VNALV MY K   +  A++LF   +++ + VL N+I+S+Y 
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD- 375
             G + E L +  EM + GP P+  T++SA++A         G+  H  VL++     + 
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +CN +I MY +CGK                               +  A  +  +M   
Sbjct: 321 YVCNALIAMYTRCGK-------------------------------MPQAERILRQMNNA 349

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           D ++WN+++ G  Q  M++EA+E F  M++   K D V+M  + +A G L  L     ++
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           AY+ K+G   ++Q+   L+DM+++C       + F RM  +D+ +WT  I   A      
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC- 614
           +A+ELF ++ ++ ++ D ++   +L A S          + +SM  +  +   I+  G  
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASS----------VLKSMLIVKEIHCHILRKGLL 519

Query: 615 -------MVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAER 666
                  +VD+ G+   +G A  + +S  ++  DV+ W S++++   + N   A     R
Sbjct: 520 DTVIQNELVDVYGKCRNMGYATRVFES--IKGKDVVSWTSMISSSALNGNESEAVELFRR 577

Query: 667 ITELDPEKSGVHVL 680
           + E       V +L
Sbjct: 578 MVETGLSADSVALL 591


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/694 (36%), Positives = 381/694 (54%), Gaps = 70/694 (10%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y     + D  R+F+ +     ++W S+I       LP +++  F  M+  G+ P+    
Sbjct: 50  YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK-------------CGA 289
             V+ +CA L +L LG+ +  YI  +G+  +    NAL++MY K              G 
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169

Query: 290 V-------------------DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           V                   D+ +++F    +++LV  NTI++   R GL  E L ++ E
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M     +PD  T+ S +   A+  D+  G+  HG  +R GL+    + +++IDMY KC +
Sbjct: 230 MGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTR 289

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              +CR+F  ++                                RD ISWN+++ G  Q 
Sbjct: 290 VADSCRVFTLLTE-------------------------------RDGISWNSIIAGCVQN 318

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
            +F+E +  FR ML  +IK    +   +  AC +L  L L K ++ YI +NG   ++ +A
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 378

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           ++LVDM+A+CG+ + A Q+F RM  RD+ +WTA I   A+ G    A+ELF +M  +GIK
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK 438

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
                   VLTACSHGGLV++ W  F SMT   G++P + HY  + DLLGRAG L EA D
Sbjct: 439 -------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYD 491

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            I  M + P   IW +LL+AC+ H+N+D+A   A RI E+DP  +G ++LL+NIY++A +
Sbjct: 492 FICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARR 551

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W   A+ R  M+  GIRK P  S IEV  KV+ F +GDESHP    I   +  +   +  
Sbjct: 552 WKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEK 611

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            GYVPD + V  DV+E++KKYL+  HSE+LA+ FG+I+T   M IRV KNLR+C DCH+ 
Sbjct: 612 EGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTA 671

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +SK+  REI+VRDN+RFH F+ G+CSC D+W
Sbjct: 672 TKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 222/494 (44%), Gaps = 72/494 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + S+IR Y+  GL  +++  ++ +   G+ PD   FP VL +C        G  +HG I+
Sbjct: 74  WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYII 133

Query: 166 KMGFDRDVFVENCLINFYGE-------------CGDIVDG-------------------R 193
           ++G D D++  N L+N Y +              G++ D                    R
Sbjct: 134 RVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVR 193

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           ++F+ M E+++VSW ++I   AR  L +E + +  EM    +KP+S T+  V+   A+  
Sbjct: 194 KIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENV 253

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           ++  G  +       G+ A+  + ++L+DMY KC  V  + ++F    +R+ +  N+I++
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
             V+ GL  E L    +ML+   +P   +  S + A A L  L  G+  HGY+ RNG + 
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 373

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              I ++++DMY KCG    A +IFD M  + +VSW ++I G   +G             
Sbjct: 374 NIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQA----------- 422

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-K 492
                                +A+ELF  M +E IK        V +AC + G +D A K
Sbjct: 423 --------------------PDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWK 455

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV-SAWTAAIGAMAME 551
           +  +     GI   ++   A+ D+  R G  + A      M      S W   + A  + 
Sbjct: 456 YFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVH 515

Query: 552 GNGEQAVELFNEML 565
            N + A ++ N +L
Sbjct: 516 KNIDMAEKVANRIL 529



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 125/233 (53%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +N++I G +  GL  E + +  E+ G  + PD FT   VL    ++     G ++HG
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHG 263

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             ++ G D D++V + LI+ Y +C  + D  RVF  ++ER+ +SW S+I  C +  L  E
Sbjct: 264 CSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDE 323

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            +  F +M+   IKP S +   ++ ACA L  L LG ++  YI   G   N  + ++LVD
Sbjct: 324 GLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVD 383

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           MY KCG + TAKQ+F   + R++V    ++      G A +A+ + ++M   G
Sbjct: 384 MYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/757 (35%), Positives = 392/757 (51%), Gaps = 104/757 (13%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  VL  C  S +  +G +VH  I       D  +   L++ Y  CGD+ +GRRVFD M
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI---KPNSV---------------- 240
            ++NV  W  ++   A+    KE++ LF  MVE+GI   +P S                 
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220

Query: 241 --------------------------------TMVCVISACAKLQNLELGDRVCAYIDEL 268
                                           T++ V+  CA    L LG  V +   + 
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
             +      N L+DMY KCG +D A ++F +  +RN+V   ++++ Y R G +  A+ +L
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLL 340

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +M   G + D V   S + A A+ G L  G+  H Y+  N +E    +CN ++DMY KC
Sbjct: 341 QQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKC 400

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G                                ++ A  VFS M  +D ISWNTM+G L 
Sbjct: 401 G-------------------------------SMDGANSVFSTMVVKDIISWNTMIGEL- 428

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
                               K D  TM  +  AC  L AL+  K I+ YI +NG   D  
Sbjct: 429 --------------------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRH 468

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +A ALVD++ +CG    A  +F  +  +D+ +WT  I    M G G +A+  FNEM   G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAG 528

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           I+PD + F+ +L ACSH GL+ QGW  F  M +   + P++ HY CMVDLL R G L +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
            + I+++P+ P+  IWG+LL  C+ + ++++A   AER+ EL+PE +G +VLL+NIYA A
Sbjct: 589 YEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEA 648

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG-DESHPEMNNISSMLREMNCR 747
            KW  V R+R ++ ++G+RK PG S IE+ GKV+ F SG + SHP    I S+L++M  +
Sbjct: 649 EKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRK 708

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +++ GY P     L++ DE +K+  L  HSEKLAMAFGL++      +RV KNLR+C DC
Sbjct: 709 MKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDC 768

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H  AK +SK   REI++RD+NRFH F+ G CSC  FW
Sbjct: 769 HEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 209/443 (47%), Gaps = 56/443 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS+I GY   GL    + +Y ++   GI  D  T   VL  C  S     G  VH   +
Sbjct: 219 WNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  F+R +   N L++ Y +CGD+    RVF++M ERNVVSWTS+I    R      A+ 
Sbjct: 279 KSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIR 338

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L  +M +EG+K + V    ++ ACA+  +L+ G  V  YI    M++N  + NAL+DMY 
Sbjct: 339 LLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYT 398

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG++D A  +F     ++++  NT++                        +PD  TM  
Sbjct: 399 KCGSMDGANSVFSTMVVKDIISWNTMIGEL---------------------KPDSRTMAC 437

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A A L  L  G+  HGY+LRNG      + N ++D+Y+KCG   +A  +FD + +K 
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +VSW  +I+G   +G    A   F+EM  RD                             
Sbjct: 498 LVSWTVMISGYGMHGYGNEAIATFNEM--RD----------------------------- 526

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA--TALVDMFARCGDP 523
             I+ D V+ + +  AC + G L+   W + YI KN  + + +L     +VD+ +R G+ 
Sbjct: 527 AGIEPDEVSFISILYACSHSGLLEQG-WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNL 585

Query: 524 QRAMQVFRRME-KRDVSAWTAAI 545
            +A +    +    D + W A +
Sbjct: 586 SKAYEFIETLPIAPDATIWGALL 608



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 17/252 (6%)

Query: 57  KQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCI 116
           K+G+       + ++  CA+ G+ ++     K    YIK N   + LF+ N+L+  Y+  
Sbjct: 345 KEGVKLDVVATTSILHACARSGSLDN----GKDVHDYIKANNMESNLFVCNALMDMYTKC 400

Query: 117 GLGVEAISLYVELAGFGIL----------PDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           G    A S++  +    I+          PD  T   +L AC   SA   G ++HG I++
Sbjct: 401 GSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILR 460

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G+  D  V N L++ Y +CG +   R +FD +  +++VSWT +I          EA+  
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIAT 520

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI--DELGMKANALMVNALVDMY 284
           F EM + GI+P+ V+ + ++ AC+    LE G R   YI  ++  ++        +VD+ 
Sbjct: 521 FNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-FYIMKNDFNIEPKLEHYACMVDLL 579

Query: 285 MKCGAVDTAKQL 296
            + G +  A + 
Sbjct: 580 SRTGNLSKAYEF 591



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 112/296 (37%), Gaps = 60/296 (20%)

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           R    +N  +    Q    E AMEL  V + ++ +++  T   V   C    +L   K +
Sbjct: 64  RQVTDYNAKILHFCQLGNLENAMEL--VCMCQKSELETKTYSSVLQLCAGSKSLTDGKKV 121

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK------------------- 535
           ++ I+ N +  D  L   LV ++A CGD +   +VF  MEK                   
Sbjct: 122 HSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDF 181

Query: 536 --------------------------------RDVSAWTAAIGAMAMEGNGEQAVELFNE 563
                                           RDV +W + I      G  E+ +E++ +
Sbjct: 182 KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQ 241

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M+  GI  D    + VL  C++ G ++ G     S+        +I     ++D+  + G
Sbjct: 242 MMYLGIDVDLATIISVLVGCANSGTLSLG-KAVHSLAIKSTFERRINFSNTLLDMYSKCG 300

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            L  AL + + M  E N V W S++A   +    D A    +++     EK GV +
Sbjct: 301 DLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIRLLQQM-----EKEGVKL 350



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 28/247 (11%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           L  C +L+ L   K+ H +IL+ G     H  + +  +   C  +G       A+  FD 
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG------LARLLFDM 492

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
                  S  L  +  +I GY   G G EAI+ + E+   GI PD+ +F  +L AC+ S 
Sbjct: 493 I-----PSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ERNVVSWTS 209
              +G +    I+K  F+ +  +E+  C+++     G++       + +    +   W +
Sbjct: 548 LLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606

Query: 210 LICACARR---DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           L+C C      +L ++     FE+  E    N+   V + +  A+ +  E   R+   I 
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFELEPE----NTGYYVLLANIYAEAEKWEEVKRMREKIG 662

Query: 267 ELGMKAN 273
           + G++ N
Sbjct: 663 KKGLRKN 669


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/609 (41%), Positives = 373/609 (61%), Gaps = 9/609 (1%)

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA-VDTAKQL-FGE 299
           +V V+  C  +  ++   +V A+I   G++    ++  L+    K    +D   +L F +
Sbjct: 42  LVSVLHGCTHINQVK---QVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQ 98

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
            +  N  L   ++  Y   G   E++ + + M   G  P   T  + + A +   D+  G
Sbjct: 99  VEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLG 158

Query: 360 RMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           R  H   +  G  G D  + NT+IDMY+KCG      R+FD M ++ V+SW SLI    K
Sbjct: 159 RQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAK 218

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
            G++E+A E+F  +P +D ++W  M+ G  Q     EA+E+F  M +  +K D VT+VGV
Sbjct: 219 VGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGV 278

Query: 479 ASACGYLGALDLAKWIYAYIEKNGI--HCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            SAC  LGA   A W+    E++G     ++ + +AL+DM+A+CG  + A +VF RME+R
Sbjct: 279 ISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEER 338

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           +V ++++ I   AM G    A+ELF+EML+  IKP+ + F+GVLTACSH G+V QG  LF
Sbjct: 339 NVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLF 398

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
             M + HGV+P   HY CMVDLLGRAG L EAL+L+K MP+ P+  +WG+LL AC+ H N
Sbjct: 399 AMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGN 458

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
            D+A  AA  + EL+P   G ++LLSNIYASAG+W +V++VR  M+ +G++K PG S +E
Sbjct: 459 PDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVE 518

Query: 717 -VNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
              G +HEF +GD SHP+   I   L ++  RL+  GY P+L++V  D+ ++EKK LL  
Sbjct: 519 GKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMS 578

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+AFGL++T+    IR+VKNLR+C DCHS     S++  REI+VRDN RFH FR 
Sbjct: 579 HSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRD 638

Query: 836 GSCSCSDFW 844
           G CSC +FW
Sbjct: 639 GRCSCGNFW 647



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 220/441 (49%), Gaps = 50/441 (11%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQ----MGTFESLTYAQ 87
           +S  +  L  C  +N++KQ H HI ++GL      ++K++ T  +    M  +  L + Q
Sbjct: 39  ESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQ 98

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
             +             F++ +LIRGY+  G  +E++ LY  +   GI P  FTF  +L A
Sbjct: 99  VEY----------PNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKA 148

Query: 148 CTKSSAFGEGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           C+ +     G QVH   + +G F  D++V N LI+ Y +CG +  G RVFDEM +R+V+S
Sbjct: 149 CSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVIS 208

Query: 207 WTSLICACAR----------------RDL---------------PKEAVYLFFEMVEEGI 235
           WTSLI A A+                +D+               P+EA+ +F  M   G+
Sbjct: 209 WTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGV 268

Query: 236 KPNSVTMVCVISACAKLQNLELGD--RVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
           K + VT+V VISACA+L   +  +  R  A     G  +N ++ +AL+DMY KCG+V+ A
Sbjct: 269 KTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDA 328

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
            ++F   ++RN+   ++++  +   GLA  A+ + DEML    +P+RVT +  ++A +  
Sbjct: 329 YKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHA 388

Query: 354 GDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNS 411
           G +  G+     +   +G+   +     M+D+  + G+ E A  +   M  N     W +
Sbjct: 389 GMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGA 448

Query: 412 LIAGLIKNGDVESAREVFSEM 432
           L+     +G+ + A+   S +
Sbjct: 449 LLGACRIHGNPDMAQIAASHL 469


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/700 (37%), Positives = 403/700 (57%), Gaps = 40/700 (5%)

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
           +   N LI  Y   G I   R VFDEM ++N++SW S++    +   P+EA  +F +M E
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
                N+++   ++S       +     V   + E     N +   A+V  Y+K G +  
Sbjct: 158 R----NTISWNGLVSGYINNGMINEAREVFDRMPE----RNVVSWTAMVRGYVKEGMISE 209

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A+ LF +  ++N+V    ++   ++ G   EA  + D M    P  D VT  + +    Q
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM----PEKDVVTRTNMIGGYCQ 265

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDS-----ICNTMIDM----------------------Y 385
           +G L+  RM    + R  +  W +     + N  +D+                      Y
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGY 325

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
             CG+ + A  +F+ M  K+VV+ N++I    +NG+V  AR+VF +M  +D  +W+ M+ 
Sbjct: 326 TNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIK 385

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
              ++ +  +A+ELFR+M  E I+ +  +++ V S C  L  LD  + I+A + ++    
Sbjct: 386 VYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDL 445

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D+ +A+ L+ M+ +CG+  +A QVF R   +DV  W + I   A  G G +A+ +F++M 
Sbjct: 446 DVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMH 505

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
             GI PD + FVGVL+ACS+ G V +G  +F SM   + V  +I HY CMVDLLGRAG L
Sbjct: 506 FSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKL 565

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
            EA+DLI+ MP+E + +IWG+LL AC+ H  +D+A  AA+++  L+P+ +G  +LLSNIY
Sbjct: 566 NEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIY 625

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES-HPEMNNISSMLREM 744
           AS G+W +VA +R  M+++ + K PG S I V  KVH+FT GD S HPE + I+ +L  +
Sbjct: 626 ASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWL 685

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
           +  LR+AGY PD + VL DVDE+EK   L +HSEKLA+A+GL+     MPIRV+KNLR+C
Sbjct: 686 SGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVC 745

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH+  KL++KV  REII+RD NRFH F+ GSCSC D+W
Sbjct: 746 GDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 166/341 (48%), Gaps = 27/341 (7%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FT 140
           L  A+  FD   + N  S T     ++I GY      V+   + +    F ++P+K   +
Sbjct: 269 LVEARMLFDEMPRRNVVSWT-----TMITGY------VQNQQVDIARKLFEVMPEKNEVS 317

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L   T      E  ++  A+      + V   N +I  +G+ G++   R+VFD+M 
Sbjct: 318 WTAMLKGYTNCGRLDEASELFNAMPI----KSVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           E++  +W+++I    R+ L  +A+ LF  M  EGI+PN  +++ V+S CA L NL+ G  
Sbjct: 374 EKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           + A +       +  + + L+ MY+KCG +  AKQ+F     +++V+ N+I++ Y + GL
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWD 375
             EAL +  +M   G  PD VT +  +SA +  G++  G      M   Y +   +E + 
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHY- 552

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAG 415
                M+D+  + GK   A  + + M  +   + W +L+  
Sbjct: 553 ---ACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/720 (34%), Positives = 403/720 (55%), Gaps = 48/720 (6%)

Query: 136 PDKFTFPFVLNACTK-------SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           PD F+F F   +          +++      +H   V  G+  D FV + L   Y     
Sbjct: 105 PDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSR 164

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVIS 247
           +   R+VFD +   + V W +L+   +      EAV  F  MV +G ++P++ T+  V+ 
Sbjct: 165 VDHARKVFDTVPSPDTVLWNTLLAGLSG----SEAVESFARMVCDGSVRPDATTLASVLP 220

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           A A++ ++ +G  V ++ ++ G+  +  ++  L+ +Y KCG V++A+ LF   +  +LV 
Sbjct: 221 AAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVA 280

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N ++S Y   G+   ++ +  E++  G  P+  T+++ +   +  G  L  +  HG+VL
Sbjct: 281 YNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVL 340

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           ++G      +   +  ++         CR+                       D+ESAR+
Sbjct: 341 KSGFTANSPVSTAITTLH---------CRL----------------------NDMESARK 369

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
            F  MP +   SWN M+ G  Q  + E A+ LF  M+   ++ + +T+    SAC  LGA
Sbjct: 370 AFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGA 429

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L L KW++  I +  +  ++ + TAL+DM+A+CG    A ++F  M+ ++V +W A I  
Sbjct: 430 LSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAG 489

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
             + G G +A++L+ +ML   + P S  F+ VL ACSHGGLV +GW +FRSMTD + ++P
Sbjct: 490 YGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINP 549

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAA 664
            I H  CMVDLLGRAG L EA +LI   P   V P   +WG+LL AC  H++ D+A  A+
Sbjct: 550 GIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--VWGALLGACMVHKDSDLAKLAS 607

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           +++ ELDPE SG +VLLSN++ S  +++  A VR + K + + K PG + IE+  K H F
Sbjct: 608 QKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVF 667

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            +GD +HP+   I S L ++  ++ +AGY P+    L DV+E+EK++++  HSEKLA+AF
Sbjct: 668 MAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAF 727

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GL+ST     IR++KNLR+C DCH+  K +SKV  R I+VRD +RFH FR G CSC D+W
Sbjct: 728 GLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 220/477 (46%), Gaps = 44/477 (9%)

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPF 143
           +A+K FD        S    ++N+L+ G S    G EA+  +  +   G + PD  T   
Sbjct: 167 HARKVFD-----TVPSPDTVLWNTLLAGLS----GSEAVESFARMVCDGSVRPDATTLAS 217

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL A  + +    G  VH    K G      V   LI+ Y +CGD+   R +FD M + +
Sbjct: 218 VLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPD 277

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +V++ +LI   +   +   +V LF E++  G+ PNS T+V +I   +   +  L   +  
Sbjct: 278 LVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHG 337

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           ++ + G  AN+ +  A+  ++ +   +++A++ F    ++ +   N ++S Y + GL   
Sbjct: 338 FVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEM 397

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           A+A+ ++M+    RP+ +T+ S +SA AQLG L  G+  H  +    LE    +   +ID
Sbjct: 398 AVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALID 457

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG    A RIF+ M NK VVSWN++IAG   +G                       
Sbjct: 458 MYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQ---------------------- 495

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNG 502
                      EA++L++ ML   +     T + V  AC + G ++   K   +  +   
Sbjct: 496 ---------GAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYA 546

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA--WTAAIGAMAMEGNGEQA 557
           I+  ++  T +VD+  R G  + A ++     K  V    W A +GA  +  + + A
Sbjct: 547 INPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLA 603


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/700 (37%), Positives = 403/700 (57%), Gaps = 40/700 (5%)

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
           +   N LI  Y   G I   R VFDEM ++N++SW S++    +   P+EA  +F +M E
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
                N+++   ++S       +     V   + E     N +   A+V  Y+K G +  
Sbjct: 158 R----NTISWNGLVSGYINNGMINEAREVFDRMPE----RNVVSWTAMVRGYVKEGMISE 209

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A+ LF +  ++N+V    ++   ++ G   EA  + D M    P  D VT  + +    Q
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM----PEKDVVTRTNMIGGYCQ 265

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDS-----ICNTMIDM----------------------Y 385
           +G L+  RM    + R  +  W +     + N  +D+                      Y
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGY 325

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
             CG+ + A  +F+ M  K+VV+ N++I    +NG+V  AR+VF +M  +D  +W+ M+ 
Sbjct: 326 TNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIK 385

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
              ++ +  +A+ELFR+M  E I+ +  +++ V S C  L  LD  + I+A + ++    
Sbjct: 386 VYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDL 445

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D+ +A+ L+ M+ +CG+  +A QVF R   +DV  W + I   A  G G +A+ +F++M 
Sbjct: 446 DVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMH 505

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
             GI PD + FVGVL+ACS+ G V +G  +F SM   + V  +I HY CMVDLLGRAG L
Sbjct: 506 FSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKL 565

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
            EA+DLI+ MP+E + +IWG+LL AC+ H  +D+A  AA+++  L+P+ +G  +LLSNIY
Sbjct: 566 NEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIY 625

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES-HPEMNNISSMLREM 744
           AS G+W +VA +R  M+++ + K PG S I V  KVH+FT GD S HPE + I+ +L  +
Sbjct: 626 ASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWL 685

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
           +  LR+AGY PD + VL DVDE+EK   L +HSEKLA+A+GL+     MPIRV+KNLR+C
Sbjct: 686 SGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVC 745

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH+  KL++KV  REII+RD NRFH F+ GSCSC D+W
Sbjct: 746 GDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 166/341 (48%), Gaps = 27/341 (7%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FT 140
           L  A+  FD   + N  S T     ++I GY      V+   + +    F ++P+K   +
Sbjct: 269 LVEARMLFDEMPRRNVVSWT-----TMITGY------VQNQQVDIARKLFEVMPEKNEVS 317

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L   T      E  ++  A+      + V   N +I  +G+ G++   R+VFD+M 
Sbjct: 318 WTAMLKGYTNCGRLDEASELFNAMPI----KSVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           E++  +W+++I    R+ L  +A+ LF  M  EGI+PN  +++ V+S CA L NL+ G  
Sbjct: 374 EKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           + A +       +  + + L+ MY+KCG +  AKQ+F     +++V+ N+I++ Y + GL
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWD 375
             EAL +  +M   G  PD VT +  +SA +  G++  G      M   Y +   +E + 
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHY- 552

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAG 415
                M+D+  + GK   A  + + M  +   + W +L+  
Sbjct: 553 ---ACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590


>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
          Length = 799

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/672 (38%), Positives = 395/672 (58%), Gaps = 40/672 (5%)

Query: 195 VFDEMSERNVVSWTSL-ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           +FD M     +  T+L  C+ A  D P     LF  M   G++P+  T   +   C+   
Sbjct: 59  LFDRMPPSTFLFDTALRACSRAGSD-PHRPFLLFRRMRRAGVRPDGFTFHFLFK-CSSSS 116

Query: 254 NLELGDRVCAYIDELGMK-----ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV-- 306
           +      +C  +    ++     A   + N+L+ MY++ G    A++ F E   ++ V  
Sbjct: 117 SRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAW 176

Query: 307 ------------LCNT-----------------IMSNYVRLGLAREALAILDEMLLHGPR 337
                       LC+T                 +++ Y R   AREA+     ML HG  
Sbjct: 177 TMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIA 236

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD VT+++ +SA A+L DL  GR  H  V   G+   +++   +IDMY KCG    A ++
Sbjct: 237 PDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQV 296

Query: 398 FDHMSN-KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           FD +       SWN++I G  K+G V+ AR +F EM  RD I++N+M+ G        EA
Sbjct: 297 FDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREA 356

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + LF  M    ++VD  T+V + +AC  LGAL   + ++A IE+  +  D+ L TAL+DM
Sbjct: 357 LLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDM 416

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CG    A  VF+RM KRDV  WTA I  +A  G G+ A+E F +M   G +P+S+ +
Sbjct: 417 YMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSY 476

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           + VLTACSH  L+N+G   F  M  ++ + PQI HYGCM+DLLGR+GLL EA+DL+K+MP
Sbjct: 477 IAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMP 536

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           ++PN VIW S+L+AC+ H+++D+A  AAE + +L+P++ GV+V L NIY  + +W N ++
Sbjct: 537 IQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASK 596

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R+ M+E+ ++K  G SSI V G+VH+F   D+SHP +  I +ML E++ RL+  GY P 
Sbjct: 597 IRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPL 656

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
            + + +DVDE+EK+  L  HSEKLA+AFGLI+ +  +P+ + KNLR+C DCHS  KL+S+
Sbjct: 657 TSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISR 716

Query: 817 VYDREIIVRDNN 828
           +++REIIVRD +
Sbjct: 717 LWNREIIVRDRS 728



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 151/579 (26%), Positives = 249/579 (43%), Gaps = 112/579 (19%)

Query: 43  KTLNELKQPHCHILKQG--LGHKPS--YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +T+ +  + H  +   G  L H PS  ++   +  C +      L YA   FD       
Sbjct: 10  RTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLH-LRYALHLFD------R 62

Query: 99  TSATLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGILPDKFTFPFVLN---ACTKSSAF 154
              + F++++ +R  S  G        L+  +   G+ PD FTF F+     + ++  + 
Sbjct: 63  MPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSL 122

Query: 155 GEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-------------- 199
                +H A ++ M      FV N LI+ Y   G   D RR FDE+              
Sbjct: 123 LLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISG 182

Query: 200 -----------------SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
                              R+V+SWTSLI A +R +  +EAV  F  M+  GI P+ VT+
Sbjct: 183 LAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTV 242

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC--------------- 287
           + V+SACAKL++LELG  +   ++E GM  +  +V AL+DMY KC               
Sbjct: 243 IAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGR 302

Query: 288 -----------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
                            G VD A+ LF E + R+++  N++M+ Y+  G  REAL +   
Sbjct: 303 GPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMS 362

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M  H  R D  T+++ ++A A LG L  GR  H  + +  +E    +   ++DMYMKCG+
Sbjct: 363 MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGR 422

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            + A  +F  M  + V +W ++IAGL  NG                              
Sbjct: 423 VDEATIVFQRMGKRDVHTWTAMIAGLAFNG------------------------------ 452

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQL 509
            M + A+E F  M  +  + + V+ + V +AC +   L+  +  +  +     IH  ++ 
Sbjct: 453 -MGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEH 511

Query: 510 ATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              ++D+  R G    AM + + M  + +   W + + A
Sbjct: 512 YGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSA 550


>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/572 (41%), Positives = 358/572 (62%), Gaps = 17/572 (2%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI---LDEMLLHGPRPDRVTMLSA 346
           +D A ++F +   RN    NTI+  +      +  +AI    + M      P+R T  S 
Sbjct: 75  LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG--------------KQE 392
           + A A+ G +  G+  HG  L+ G  G + + + ++ MY+ CG              +++
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           M         +  +V WN +I G ++ GD ++AR +F +M  R  +SWNTM+ G +    
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           F++A+E+FR M    I+ + VT+V V  A   LG+L+L +W++ Y E +GI  D  L +A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+DM+++CG  ++A+ VF R+ + +V  W+A I   A+ G    A++ F +M + G++P 
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + ++ +LTACSHGGLV +G   F  M  + G+ P+I HYGCMVDLLGR+GLL EA + I
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
            +MP++P+DVIW +LL AC+   NV++    A  + ++ P  SG +V LSN+YAS G W+
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            V+ +RL+MKE+ IRK PG S I+++G +HEF   D+SHP+   I+SML E++ +LR AG
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y P  T VLL+++E++K+ +L +HSEK+A AFGLISTS   PIR+VKNLR+C DCHS  K
Sbjct: 555 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 614

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L+SKVY R+I VRD  RFH F+ GSCSC D+W
Sbjct: 615 LISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 208/442 (47%), Gaps = 56/442 (12%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF-ESLTYAQKAFDYYIKD 96
            + NC+T+ +L Q H   +K G        ++++  CA        L YA K F+   + 
Sbjct: 29  QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR 88

Query: 97  NETSATLFMYNSLIRGYSCIG--LGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSA 153
           N      F +N++IRG+S       + AI+L+ E+     + P++FTFP VL AC K+  
Sbjct: 89  N-----CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR-------------------- 193
             EG Q+HG  +K GF  D FV + L+  Y  CG + D R                    
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203

Query: 194 -------------------------RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
                                     +FD+M +R+VVSW ++I   +     K+AV +F 
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           EM +  I+PN VT+V V+ A ++L +LELG+ +  Y ++ G++ + ++ +AL+DMY KCG
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            ++ A  +F      N++  + +++ +   G A +A+    +M   G RP  V  ++ ++
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383

Query: 349 ASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-V 406
           A +  G +  GR     ++  +GLE        M+D+  + G  + A     +M  K   
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443

Query: 407 VSWNSLIAGLIKNGDVESAREV 428
           V W +L+      G+VE  + V
Sbjct: 444 VIWKALLGACRMQGNVEMGKRV 465


>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
          Length = 582

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/584 (41%), Positives = 359/584 (61%), Gaps = 21/584 (3%)

Query: 277 VNALVDMYMKCG----------AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           V   VD+  +CG          A+ T+ QL      R++ L + ++    R      AL 
Sbjct: 4   VAGYVDLLSRCGEARAIVRIQAALLTSGQL-----PRSVELHDALIRALSRSARPHLALP 58

Query: 327 ILDEMLLHG--PRPDRVTML--SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +   +L  G  P P  +  L  S   + A  G  +     H + ++ GL+ +  + N +I
Sbjct: 59  LYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHTHAVKLGLDRFVLVSNALI 118

Query: 383 DMYMK-CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
            ++    G       +    +     ++N+LI    + G +  AR +F EMP R+ +SW+
Sbjct: 119 RVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWS 178

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            M+ G  Q     EA+ +F  M +E ++ D   +VGV +AC   GAL+  KW++ Y++ +
Sbjct: 179 AMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAH 238

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           GI  ++   TALVDM+++CG+ Q AM VF RM+ ++V AWT  I  +AM G G +AV LF
Sbjct: 239 GIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLF 298

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
            +M   GI+PD I F+GVL AC+H GLV++G  LF SM   +G+ P+I HYGCMVDLL R
Sbjct: 299 AQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLAR 358

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
            G L EA ++I+ MP+EP+ +IWG+L+A C+ H+NV+ A Y A+    L+P+KSG +VLL
Sbjct: 359 NGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLL 418

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIYA++G+  +   +R  M+E+G+ K PG S++EVNG +H+F  GD SHP + +I S  
Sbjct: 419 SNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKW 478

Query: 742 REMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
            E++ R+R + GY+PD+  VLLD++E+EK+  LS HSEKLA+AF LIS S  MPIR+ KN
Sbjct: 479 YEIDTRIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKN 538

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH   KL+SKVY REI+VRD  RFH F++G+CSC D+W
Sbjct: 539 LRVCHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKDYW 582



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 159/366 (43%), Gaps = 46/366 (12%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF-GEGV---QV 160
           ++++LIR  S       A+ LY  L   G+LP   T P +L +   S A  G  V    V
Sbjct: 39  LHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTV 98

Query: 161 HGAIVKMGFDRDVFVENCLINF--------------------------------YGECGD 188
           H   VK+G DR V V N LI                                  Y   G 
Sbjct: 99  HTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGR 158

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + D R +FDEM  RN VSW++++    +    +EA+ +F  M  E ++P+   +V V++A
Sbjct: 159 LADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAA 218

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA+   LE G  V  Y+   G+K N     ALVDMY KCG V  A  +F   + +N++  
Sbjct: 219 CAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAW 278

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCH 363
            T++      G   EA+ +  +M   G RPD +  +  + A    G +  GR     M  
Sbjct: 279 TTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVR 338

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDV 422
            Y ++  +E +      M+D+  + G    A  +   M      + W +L+AG   + +V
Sbjct: 339 KYGIKPKIEHY----GCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNV 394

Query: 423 ESAREV 428
           E A  V
Sbjct: 395 EFAEYV 400


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 258/716 (36%), Positives = 404/716 (56%), Gaps = 71/716 (9%)

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G   ++  F F+ ++ TK+  F + +  H  +V  G  + +F+   L+N Y   GD+ 
Sbjct: 12  GLGNQNEEIDFNFLFDSSTKT-PFAKCL--HALLVVAGKVQSIFISTRLVNLYANLGDVS 68

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE--MVEEGIKPNSVTMVCVISA 248
             R  FD++ +++V +W S+I A        EA+  F++  +V E I+P+  T   V+ A
Sbjct: 69  LSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSE-IRPDFYTFPPVLKA 127

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C  L +   G ++  +  +LG + N  +  +L+ MY + G    A+ LF +   R++   
Sbjct: 128 CGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSW 184

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N ++S  ++ G A +AL +LDEM L G + + VT++                        
Sbjct: 185 NAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVV------------------------ 220

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
                  SI    +DMY K G  + A ++F+ +  K V+SWN+LI G  +NG    A EV
Sbjct: 221 -------SILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEV 273

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           +                      M EE  E+           ++ T V +  A  ++GAL
Sbjct: 274 Y---------------------KMMEECKEIIP---------NQGTWVSILPAYAHVGAL 303

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
                I+  + K  +H D+ +AT L+D++ +CG    AM +F ++ +     W A I   
Sbjct: 304 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 363

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
            + G+ E+ ++LF EML +G+KPD + FV +L+ACSH G V +G   FR M + +G+ P 
Sbjct: 364 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPS 422

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
           + HYGCMVDLLGRAG L  A D IK MP++P+  IWG+LL AC+ H N+++  +A++R+ 
Sbjct: 423 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 482

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           E+D +  G +VLLSNIYA+ GKW  V +VR   +E+G++K PG S+IEVN KV  F +G+
Sbjct: 483 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 542

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           +SHP+   I   LR +  +++  GY+PD + VL DV+E EK+++L+ HSE+LA+AFG+IS
Sbjct: 543 QSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 602

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           T    PIR+ KNLR+C DCH+  K +S++  REI+VRD+NRFH F+ G CSC D+W
Sbjct: 603 TPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 208/463 (44%), Gaps = 68/463 (14%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAF 154
           D      ++ +NS+I  Y   G   EAI  + +L     I PD +TFP VL AC      
Sbjct: 75  DQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTL 131

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
            +G ++H    K+GF  +VFV   LI+ Y   G     R +FD+M  R++ SW ++I   
Sbjct: 132 VDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 191

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +     +A+ +  EM  EGIK N VT+V ++                            
Sbjct: 192 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP--------------------------- 224

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LL 333
                 VDMY K G +D+A ++F     ++++  NT+++ Y + GLA EA+ +   M   
Sbjct: 225 ----VFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEEC 280

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
               P++ T +S + A A +G L  G   HG V++  L     +   +ID+Y KCG+   
Sbjct: 281 KEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVD 340

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A  +F  +  ++ V+WN++I+    +G  E   ++F EM                     
Sbjct: 341 AMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEM--------------------- 379

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
                     L E +K D VT V + SAC + G ++  KW +  +++ GI   ++    +
Sbjct: 380 ----------LDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCM 429

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           VD+  R G  + A    + M  + D S W A +GA  + GN E
Sbjct: 430 VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 121/221 (54%), Gaps = 11/221 (4%)

Query: 75  AQMGTFESLTYAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
           A++G  +S   A K F+   +KD      +  +N+LI GY+  GL  EAI +Y  +    
Sbjct: 231 AKLGLLDS---AHKVFEIIPVKD------VISWNTLITGYAQNGLASEAIEVYKMMEECK 281

Query: 134 -ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
            I+P++ T+  +L A     A  +G+++HG ++K     DVFV  CLI+ YG+CG +VD 
Sbjct: 282 EIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDA 341

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             +F ++ + + V+W ++I         ++ + LF EM++EG+KP+ VT V ++SAC+  
Sbjct: 342 MSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 401

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
             +E G      + E G+K +      +VD+  + G ++ A
Sbjct: 402 GFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMA 442



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 157/332 (47%), Gaps = 12/332 (3%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
            +F+  SLI  YS  G    A SL+ ++       D  ++  +++   ++    + + V 
Sbjct: 149 NVFVAASLIHMYSRFGFTGIARSLFDDMP----FRDMGSWNAMISGLIQNGNAAQALDVL 204

Query: 162 GAI----VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             +    +KM F   V +    ++ Y + G +    +VF+ +  ++V+SW +LI   A+ 
Sbjct: 205 DEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 264

Query: 218 DLPKEAVYLFFEMVEE--GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
            L  EA+ ++ +M+EE   I PN  T V ++ A A +  L+ G ++   + +  +  +  
Sbjct: 265 GLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVF 323

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +   L+D+Y KCG +  A  LF +    + V  N I+S +   G A + L +  EML  G
Sbjct: 324 VATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEG 383

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +PD VT +S +SA +  G +  G+ C   +   G++        M+D+  + G  EMA 
Sbjct: 384 VKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAY 443

Query: 396 RIFDHMSNKTVVS-WNSLIAGLIKNGDVESAR 426
                M  +   S W +L+     +G++E  +
Sbjct: 444 DFIKDMPLQPDASIWGALLGACRIHGNIELGK 475


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/688 (36%), Positives = 387/688 (56%), Gaps = 34/688 (4%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+H  I+  G   + F+ N L+N Y  CG + D +++F     +NVVSWT LI   A+ D
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKND 101

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
              EA+ +F EM     KPN+VT+  V+ A A L  + +   V  +    G + N  +  
Sbjct: 102 CFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           ALVDMY K G +  A+QLF    +RN+V  N I+S Y   G + EA+ + + M   G   
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D  T++S + AS  +G L  G   HG+++R G E    I   ++D+Y             
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY------------- 268

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                   VS N           V+ A  VFSEM  +D  +W  ML G +    ++ A++
Sbjct: 269 --------VSHNC----------VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIK 310

Query: 459 LFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            F  ML  + +K+D + ++G+ S+C + GAL   + ++A   K     ++ + +A++DM+
Sbjct: 311 HFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMY 370

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A CG+ + A + F  M ++DV  W A I    M G G  A++LF +M   G+ PD   FV
Sbjct: 371 ANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFV 430

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL ACSH G+V +G  +F  M       P + HY C++D+LGRAG L  A   I +MP 
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPF 490

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           +P+  ++ +LL AC+ H N+ +    +++I E++P  +G +VLLSN+YA AG W  V   
Sbjct: 491 QPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMT 550

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  ++ + ++K PG SSIE+N +++ F +G++ HP+   I  +L+ +  +++ AGYVP+ 
Sbjct: 551 RASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPN- 609

Query: 758 TNVLL-DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           TNVLL DV +  KK +L HHSEK+A+AFGL+ T     IR+ KNLR C DCHS +K VSK
Sbjct: 610 TNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSK 669

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           V+ R ++++D NRFH F+ G CSC D+W
Sbjct: 670 VFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 241/545 (44%), Gaps = 20/545 (3%)

Query: 20  LTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGT 79
           L++    +  P        L+  K L  L+Q H  I+  GL H     + ++      G 
Sbjct: 12  LSSNPTQRLCPLAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGL 71

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
              L  A++ F +    N  S T+     LI G +     VEAI ++ E+      P+  
Sbjct: 72  ---LADAKQIFHHTPCKNVVSWTI-----LISGLAKNDCFVEAIDVFREMTMGNFKPNAV 123

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   VL A            VH   V+ GF+ +VFVE  L++ Y + G +   R++F+ M
Sbjct: 124 TISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESM 183

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           SERNVVSW +++   +     +EA+ LF  M  +G+  +  T++ +I A   +  L++G 
Sbjct: 184 SERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGT 243

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            +  +I   G + +  +  AL+D+Y+    VD A ++F E   +++     +++ +    
Sbjct: 244 GIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGR 303

Query: 320 LAREALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
               A+   ++ML +   + D + ++  +S+ +  G L  GR  H   ++        + 
Sbjct: 304 HWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVG 363

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR--- 435
           + +IDMY  CG  E A R F  M  K VV WN++IAG   NG    A ++F +M G    
Sbjct: 364 SAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLD 423

Query: 436 -DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG-VASACGYLGALDLAKW 493
            D  ++ ++L   +   M  E +++F  M+     +  +     V    G  G LD A  
Sbjct: 424 PDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAA-- 481

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR---MEKRDVSAWTAAIGAMAM 550
            Y++I       D  + + L+      G+ +   ++ ++   ME  D   +       A+
Sbjct: 482 -YSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYAL 540

Query: 551 EGNGE 555
            GN E
Sbjct: 541 AGNWE 545


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/739 (34%), Positives = 416/739 (56%), Gaps = 55/739 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN +I GY   G    A  L+ E+       D  ++  ++    ++   G+  +    + 
Sbjct: 98  YNGMISGYLRNGEFELARKLFDEMPE----RDLVSWNVMIKGYVRNRNLGKARE----LF 149

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           ++  +RDV   N +++ Y + G + D R VFD M E+N VSW +L+ A  +    +EA  
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF       +    V+  C++    K + +    +   + D + ++ + +  N ++  Y 
Sbjct: 210 LFKSRENWAL----VSWNCLLGGFVKKKKIVEARQ---FFDSMNVR-DVVSWNTIITGYA 261

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G +D A+QLF E   +++     ++S Y++  +  EA  + D+M    P  + V+   
Sbjct: 262 QSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVS--- 314

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
                                       W    N M+  Y++  + EMA  +FD M  + 
Sbjct: 315 ----------------------------W----NAMLAGYVQGERMEMAKELFDVMPCRN 342

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V +WN++I G  + G +  A+ +F +MP RD +SW  M+ G +Q     EA+ LF  M  
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E  +++R +     S C  + AL+L K ++  + K G      +  AL+ M+ +CG  + 
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A  +F+ M  +D+ +W   I   +  G GE A+  F  M R+G+KPD    V VL+ACSH
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV++G   F +MT  +GV P   HY CMVDLLGRAGLL +A +L+K+MP EP+  IWG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL A + H N ++A  AA++I  ++PE SG++VLLSN+YAS+G+W +V ++R++M+++G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K+PG S IE+  K H F+ GDE HPE + I + L E++ R++ AGYV   + VL DV+
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+EK+ ++ +HSE+LA+A+G++  S   PIRV+KNLR+C DCH+  K ++++  R II+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           DNNRFH F+ GSCSC D+W
Sbjct: 763 DNNRFHHFKDGSCSCGDYW 781



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 202/452 (44%), Gaps = 80/452 (17%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR---LGLAREALAI 327
           + +++  N ++  Y++ G  + A++LF E  +R+LV  N ++  YVR   LG ARE   I
Sbjct: 92  RWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEI 151

Query: 328 LDE-------MLLHGPRP-----------DRVTMLSAVSASAQLGDLL-CGRMCHGYVLR 368
           + E        +L G              DR+   + VS +A L   +   +M    +L 
Sbjct: 152 MPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF 211

Query: 369 NGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
              E W  +  N ++  ++K  K   A + FD M+ + VVSWN++I G  ++G ++ AR+
Sbjct: 212 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +F E P +D  +W  M+ G  Q  M EEA ELF  M  ER +V    M+      GY+  
Sbjct: 272 LFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-PERNEVSWNAMLA-----GYVQG 325

Query: 488 --LDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
             +++AK ++     + + C ++     ++  +A+CG    A  +F +M KRD  +W A 
Sbjct: 326 ERMEMAKELF-----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGW 593
           I   +  G+  +A+ LF +M R+G + +   F   L+ C+           HG LV  G+
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440

Query: 594 H------------------------LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
                                    LF+ M         IV +  M+    R G    AL
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEVAL 495

Query: 630 DLIKSMPVE---PNDVIWGSLLAACQKHQNVD 658
              +SM  E   P+D    ++L+AC     VD
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVD 527



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 22/348 (6%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D      +F + +++ GY    +  EA  L      F  +P++    +  NA       G
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEAREL------FDKMPERNEVSW--NAMLAGYVQG 325

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           E +++   +  +   R+V   N +I  Y +CG I + + +FD+M +R+ VSW ++I   +
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +     EA+ LF +M  EG + N  +    +S CA +  LELG ++   + + G +    
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 445

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + NAL+ MY KCG+++ A  LF E   +++V  NT+++ Y R G    AL   + M   G
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-----MIDMYMKCGK 390
            +PD  TM++ +SA +  G +  GR  + Y +    + +  + N+     M+D+  + G 
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQ-YFYTM---TQDYGVMPNSQHYACMVDLLGRAGL 561

Query: 391 QEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMP 433
            E A  +  +M        W +L+     +G+ E    +A ++F+  P
Sbjct: 562 LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 28/353 (7%)

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           +C D ++   N  +S+Y+R G   EAL +   M    PR   V+    +S   + G+   
Sbjct: 58  KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFEL 113

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
            R     +    L  W    N MI  Y++      A  +F+ M  + V SWN++++G  +
Sbjct: 114 ARKLFDEMPERDLVSW----NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ 169

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           NG V+ AR VF  MP ++ +SWN +L    Q +  EEA  LF+          R     V
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK---------SRENWALV 220

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
           +  C   G +   K + A    + ++  D+     ++  +A+ G    A Q+F     +D
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           V  WTA +         E+A ELF++M  +    + + +  +L     G  +     LF 
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFD 336

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            M         +  +  M+    + G + EA +L   MP + + V W +++A 
Sbjct: 337 VMP-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 138/285 (48%), Gaps = 24/285 (8%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  I  YM+ G+   A R+F  M   + VS+N +I+G ++NG+ E AR++F EMP RD +
Sbjct: 68  NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN M+ G  +     +A ELF +M  ER      TM+   S     G +D A+ ++  +
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIM-PERDVCSWNTML---SGYAQNGCVDDARSVFDRM 183

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            EKN +  +     AL+  + +    + A  +F+  E   + +W   +G    +    +A
Sbjct: 184 PEKNDVSWN-----ALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP--QIVHYGCM 615
            + F+ M  +    D + +  ++T  +  G +++   LF         SP   +  +  M
Sbjct: 239 RQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAM 287

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           V    +  ++ EA +L   MP E N+V W ++LA   + + +++A
Sbjct: 288 VSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMA 331



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D++     +  + R G    A++VF+RM +    ++   I      G  E A +LF+EM 
Sbjct: 63  DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
            + +   +++  G +   + G    +   LF  M +       +  +  M+    + G +
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLG----KARELFEIMPE-----RDVCSWNTMLSGYAQNGCV 173

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            +A  +   MP E NDV W +LL+A  ++  ++ A
Sbjct: 174 DDARSVFDRMP-EKNDVSWNALLSAYVQNSKMEEA 207


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 284/838 (33%), Positives = 434/838 (51%), Gaps = 71/838 (8%)

Query: 39   LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQM-GTFESLTYAQKAFDYYI 94
            LK    +++L   KQ H H+ K   GH P     V  +   M G    LT A++ FD   
Sbjct: 337  LKAAAAVHDLCLGKQIHAHVFK--FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIP 394

Query: 95   KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK-SSA 153
              +  S     +NS+I           ++ L+  +    + P  FT   V +AC+     
Sbjct: 395  DRDHVS-----WNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGG 449

Query: 154  FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
               G QVH   ++ G D   +  N L+  Y   G + D + +F     +++VSW ++I +
Sbjct: 450  VRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISS 508

Query: 214  CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKA 272
             ++ D  +EA+   + M+ +G++P+ VT+  V+ AC++L+ L +G  +  Y    G +  
Sbjct: 509  LSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIE 568

Query: 273  NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
            N+ +  ALVDMY  C      + +F     R + + N +++ Y R     +AL +  EM+
Sbjct: 569  NSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMI 628

Query: 333  LHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
                  P+  T  S + A  +          HGY+++ G      + N ++DMY + G+ 
Sbjct: 629  SESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGR- 687

Query: 392  EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
                                          VE ++ +F  M  RD +SWNTM+ G     
Sbjct: 688  ------------------------------VEISKTIFGRMNKRDIVSWNTMITGCIVCG 717

Query: 452  MFEEAMELFRVMLSER------------------IKVDRVTMVGVASACGYLGALDLAKW 493
             +++A+ L   M   +                   K + VT++ V   C  L AL   K 
Sbjct: 718  RYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKE 777

Query: 494  IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
            I+AY  K  +  D+ + +ALVDM+A+CG    A +VF +M  R+V  W   I A  M G 
Sbjct: 778  IHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGK 837

Query: 554  GEQAVELFNEML------RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            GE+A+ELF  M       R+ I+P+ + ++ +  ACSH G+V++G HLF +M   HGV P
Sbjct: 838  GEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEP 897

Query: 608  QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAER 666
            +  HY C+VDLLGR+G + EA +LI +MP   N V  W SLL AC+ HQ+V+    AA+ 
Sbjct: 898  RGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKH 957

Query: 667  ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
            +  L+P  +  +VL+SNIY+SAG W     VR +MKE G+RK PG S IE   +VH+F S
Sbjct: 958  LFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLS 1017

Query: 727  GDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGL 786
            GD SHP+   +   L  ++ R+R  GYVPD++ VL +VD++EK+ +L  HSE+LA+AFGL
Sbjct: 1018 GDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGL 1077

Query: 787  ISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            ++T     IRV KNLR+C DCH   K++SK+ DREII+RD  RFH F  G+CSC D+W
Sbjct: 1078 LNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 169/557 (30%), Positives = 258/557 (46%), Gaps = 57/557 (10%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF--DRDVFVENC 178
           +AIS Y  +      PD F FP VL A         G Q+H  + K G      V V N 
Sbjct: 313 DAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANS 372

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           L+N YG+CGD+   R+VFD++ +R+ VSW S+I    R +  + +++LF  M+ E + P 
Sbjct: 373 LVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPT 432

Query: 239 SVTMVCVISACAKLQ-NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           S T+V V  AC+ ++  + LG +V AY    G        NALV MY + G V+ AK LF
Sbjct: 433 SFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALF 491

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
           G    ++LV  NT++S+  +     EAL  +  M++ G RPD VT+ S + A +QL  L 
Sbjct: 492 GVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLR 551

Query: 358 CGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
            GR  H Y LRNG    +S   T ++DMY  C + +    +FD +  +TV  WN+L+AG 
Sbjct: 552 IGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGY 611

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTM 475
            +N                                  ++A+ LF  M+SE     +  T 
Sbjct: 612 ARN-------------------------------EFDDQALRLFVEMISESEFCPNATTF 640

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
             V  AC         + I+ YI K G   D  +  AL+DM++R G  + +  +F RM K
Sbjct: 641 ASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNK 700

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEM-LRQG-----------------IKPDSIVFV 577
           RD+ +W   I    + G  + A+ L +EM  RQG                  KP+S+  +
Sbjct: 701 RDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLM 760

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL  C+    + +G  +  +      ++  +     +VD+  + G L  A  +   MP+
Sbjct: 761 TVLPGCAALAALGKGKEI-HAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPI 819

Query: 638 EPNDVIWGSLLAACQKH 654
             N + W  L+ A   H
Sbjct: 820 R-NVITWNVLIMAYGMH 835



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 39/269 (14%)

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS--ICN 379
           R+A++    ML     PD     + + A+A + DL  G+  H +V + G     S  + N
Sbjct: 312 RDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVAN 371

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           ++++MY KCG    A ++FD + ++  VSWNS+IA L +          F E        
Sbjct: 372 SLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCR----------FEE-------- 413

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL-GALDLAKWIYAYI 498
                        +E ++ LFR+MLSE +     T+V VA AC ++ G + L K ++AY 
Sbjct: 414 -------------WELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYT 460

Query: 499 EKNGIHCDMQLAT--ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            +NG   D++  T  ALV M+AR G    A  +F   + +D+ +W   I +++     E+
Sbjct: 461 LRNG---DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEE 517

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A+     M+  G++PD +    VL ACS 
Sbjct: 518 ALMYVYLMIVDGVRPDGVTLASVLPACSQ 546


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/719 (35%), Positives = 397/719 (55%), Gaps = 48/719 (6%)

Query: 136 PDKFTFPFVLNACT-----KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           PD F+F F   + +     + +       +HG  V  G+  D FV + L   Y +     
Sbjct: 107 PDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGD 166

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLP-KEAVYLFFEMVEEG-IKPNSVTMVCVISA 248
           D R+VFD +   + + W +L+       LP  EA+  F  MV+ G ++P+S T+   + A
Sbjct: 167 DARKVFDTVPSPDTILWNTLLAG-----LPGSEALEAFVRMVDAGRVRPDSTTLASSLRA 221

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
            A+  ++ +G  V  Y  + G+  +  +V  L+ +Y KCG +D+A+ LF    + +LV  
Sbjct: 222 AAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAY 281

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N ++S Y   G+   ++ +  E+   G RP+  T+++ +   +  G  L  R  H +V++
Sbjct: 282 NALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVK 341

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
             L+    +   +  +Y         CR+                       D+ESAR +
Sbjct: 342 ARLDADALVSTALTTLY---------CRL----------------------NDMESARSI 370

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           F  M  +   SWN M+ G  Q  + E A+ LF++M    ++ + +T+    SAC +LGAL
Sbjct: 371 FDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGAL 430

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
            L KW++  I K  +  ++ + TAL+DM+A+CG    A  +F RM+ ++V +W A I   
Sbjct: 431 SLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGY 490

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
            + G G +A++L+ +ML   I P S  F+ V+ ACSHGGLV++G  +FR MT+ + ++P 
Sbjct: 491 GLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPG 550

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAAE 665
           I H  CMVDLLGRAG L EAL+LI   P   + P   +WG+LL AC  H+N D+A  A++
Sbjct: 551 IEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG--VWGALLGACMVHKNSDLAKLASQ 608

Query: 666 RITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFT 725
           ++ ELD E +G +VLLSN+Y S   ++  A VR + K + + K PG + IE+  + H F 
Sbjct: 609 KLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFM 668

Query: 726 SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
           +GD  HP+   I S L  +  ++ +AGY P     L DV+E+EK++++  HSEKLA+AFG
Sbjct: 669 AGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFG 728

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L+ST     IR++KNLR+C DCH+  K +SKV  R I+VRD +RFH FR G CSC D+W
Sbjct: 729 LLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 220/481 (45%), Gaps = 54/481 (11%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFV 144
           A+K FD        S    ++N+L+ G      G EA+  +V +   G + PD  T    
Sbjct: 168 ARKVFD-----TVPSPDTILWNTLLAGLP----GSEALEAFVRMVDAGRVRPDSTTLASS 218

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L A  ++S    G  VHG  VK G      V   L++ Y +CGD+   + +FD M   ++
Sbjct: 219 LRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDL 278

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           V++ +LI   +   + + +V LF E+   G +PNS T+V VI   +   +  L   + A+
Sbjct: 279 VAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAF 338

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           + +  + A+AL+  AL  +Y +   +++A+ +F    ++ +   N ++S Y + GL   A
Sbjct: 339 VVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMA 398

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           +A+   M     +P+ +T+ S +SA A LG L  G+  H  + +  LE    +   +IDM
Sbjct: 399 VALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDM 458

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KCG    A  IFD M NK VVSWN++I+G   +G                        
Sbjct: 459 YAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQ----------------------- 495

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-----AYIE 499
                     EA++L++ ML  RI     T + V  AC + G +D  + ++      Y  
Sbjct: 496 --------GAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRI 547

Query: 500 KNGI-HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV--SAWTAAIGAMAMEGNGEQ 556
             GI HC     T +VD+  R G    A+++     +  +    W A +GA  +  N + 
Sbjct: 548 TPGIEHC-----TCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDL 602

Query: 557 A 557
           A
Sbjct: 603 A 603



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 178/383 (46%), Gaps = 27/383 (7%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H + +K GL      ++ ++   ++ G  +S   AQ  FD    DN     L  YN+LI 
Sbjct: 235 HGYGVKCGLAEHEHVVTGLMSLYSKCGDMDS---AQFLFDRM--DNPD---LVAYNALIS 286

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ---VHGAIVKMG 168
           GYS  G+   ++ L+ EL   G  P+  T   V+      S FG  +    +H  +VK  
Sbjct: 287 GYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPV---YSPFGHELLARCLHAFVVKAR 343

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            D D  V   L   Y    D+   R +FD M E+ + SW ++I   A+  L + AV LF 
Sbjct: 344 LDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQ 403

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M E  ++PN +T+   +SACA L  L LG  V   I +  ++ N  ++ AL+DMY KCG
Sbjct: 404 LMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCG 463

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           ++  A+ +F    ++N+V  N ++S Y   G   EAL +  +ML     P   T LS + 
Sbjct: 464 SIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIY 523

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           A +  G +  G+     M + Y +  G+E     C  M+D+  + GK   A  +      
Sbjct: 524 ACSHGGLVDEGQKVFRVMTNEYRITPGIEH----CTCMVDLLGRAGKLNEALELISEFPQ 579

Query: 404 KTVVS--WNSLIAGLI--KNGDV 422
             +    W +L+   +  KN D+
Sbjct: 580 SAIGPGVWGALLGACMVHKNSDL 602


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/765 (33%), Positives = 418/765 (54%), Gaps = 39/765 (5%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           +L  A+K FD  ++    + T+     LI GYS +    EA  L+V++   G  PD  TF
Sbjct: 98  NLGEARKLFDGMVERTAVTWTI-----LIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L+ C       +  QV   I+K+G+D  + V N L++ Y +   +    ++F EM E
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 212

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            + VS+ ++I   ++  L ++AV LF EM   G+KP   T   V+ A   L ++ LG ++
Sbjct: 213 IDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQI 272

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            +++ +     N  + NAL+D Y K  +V  A++LF E  +++ V  N I+S Y   G  
Sbjct: 273 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 332

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
           + A  +  E+        +    + +S ++   D   GR  H   +    +    + N++
Sbjct: 333 KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSL 392

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           +DMY KCGK                                E A  +F+ +  R  + W 
Sbjct: 393 VDMYAKCGK-------------------------------FEEAEMIFTNLTHRSAVPWT 421

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            M+    Q+  +EE ++LF  M    +  D+ T   +  A   + +L L K ++++I K+
Sbjct: 422 AMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS 481

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G   ++   +AL+D++A+CG  + A+Q F+ M  R++ +W A I A A  G  E  ++ F
Sbjct: 482 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 541

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
            EM+  G++PDS+ F+GVL+ACSH GLV +G WH F SMT I+ + P+  HY  +VD+L 
Sbjct: 542 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWH-FNSMTQIYKLDPRREHYASVVDMLC 600

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV-HV 679
           R+G   EA  L+  MP++P++++W S+L AC+ H+N ++A  AA+++  ++  +    +V
Sbjct: 601 RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYV 660

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
            +SNIYA+AG+W NV++V   M+++G++KLP  S +E+  + H F++ D  HP++  I  
Sbjct: 661 NMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRK 720

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            +  +   + + GY PD +  L + DE+ K   L +HSE+LA+AF LIST +  PI V+K
Sbjct: 721 KIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMK 780

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR C DCH+  K++SK+  REI VRD+ RFH FR G CSC DFW
Sbjct: 781 NLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 235/501 (46%), Gaps = 44/501 (8%)

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           GE  Q      KM   ++    N +I+ Y + G++ + R++FD M ER  V+WT LI   
Sbjct: 66  GELSQARQLFEKMP-HKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGY 124

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC---AYIDELGMK 271
           ++ +  KEA  LF +M   G +P+ VT V ++S C      E+G+++      I +LG  
Sbjct: 125 SQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---NGHEMGNQITQVQTQIIKLGYD 181

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           +  ++ N LVD Y K   +D A QLF E  + + V  N +++ Y + GL  +A+ +  EM
Sbjct: 182 SRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEM 241

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
              G +P   T  + + A+  L D++ G+  H +V++        + N ++D Y K    
Sbjct: 242 QNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSV 301

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             A ++FD M  +  VS+N +I+G   +G  + A ++F E+                Q  
Sbjct: 302 IDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFREL----------------QFT 345

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD--LAKWIYAYIEKNGIHCDMQL 509
            F            +R +    TM+ +AS       LD  + + I+A         ++ +
Sbjct: 346 AF------------DRKQFPFATMLSIAS-----NTLDWEMGRQIHAQTIVTTADSEILV 388

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
             +LVDM+A+CG  + A  +F  +  R    WTA I A   +G  E+ ++LFN+M +  +
Sbjct: 389 GNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASV 448

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
             D   F  +L A +    ++ G  L  S     G    +     ++D+  + G + +A+
Sbjct: 449 IADQATFASLLRASASIASLSLGKQL-HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507

Query: 630 DLIKSMPVEPNDVIWGSLLAA 650
              + MP + N V W ++++A
Sbjct: 508 QTFQEMP-DRNIVSWNAMISA 527



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 2/223 (0%)

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +++ G +   S  N  +  ++K G+   A ++F+ M +K  VS N +I+G +K+G++  A
Sbjct: 43  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 102

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           R++F  M  R  ++W  ++GG +Q N F+EA ELF  M     + D VT V + S C   
Sbjct: 103 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 162

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
              +    +   I K G    + +   LVD + +      A Q+F+ M + D  ++ A I
Sbjct: 163 EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMI 222

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
              + +G  E+AV LF EM   G+KP    F  VL  C++ GL
Sbjct: 223 TGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/462 (22%), Positives = 188/462 (40%), Gaps = 94/462 (20%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           +K N  T +   S  +    L + + + A I + G   +    N  V  ++K G +  A+
Sbjct: 13  MKKNVSTFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQAR 72

Query: 295 QLFGECKDRNLVLCNTIMSNYVR---LGLAR----------------------------E 323
           QLF +   +N V  N ++S YV+   LG AR                            E
Sbjct: 73  QLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKE 132

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE---------GW 374
           A  +  +M   G  PD VT ++          LL G  C+G+ + N +          G+
Sbjct: 133 AFELFVQMQRCGTEPDYVTFVT----------LLSG--CNGHEMGNQITQVQTQIIKLGY 180

Query: 375 DS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           DS   + NT++D Y K  + ++AC++F  M     VS+N++I G  K+G           
Sbjct: 181 DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDG----------- 229

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                               + E+A+ LF  M +  +K    T   V  A   L  + L 
Sbjct: 230 --------------------LDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLG 269

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           + I++++ K     ++ ++ AL+D +++      A ++F  M ++D  ++   I   A +
Sbjct: 270 QQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWD 329

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM---TDIHGVSPQ 608
           G  + A +LF E+           F  +L+  S+       W + R +   T +     +
Sbjct: 330 GKHKYAFDLFRELQFTAFDRKQFPFATMLSIASN----TLDWEMGRQIHAQTIVTTADSE 385

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           I+    +VD+  + G   EA ++I +     + V W ++++A
Sbjct: 386 ILVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA 426


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/681 (37%), Positives = 398/681 (58%), Gaps = 68/681 (9%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFD + E N++ W ++    A    P  A+ L+  M+  G+ P+S T   ++ +CAK + 
Sbjct: 45  VFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKI 104

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGA------------------------- 289
            + G ++  ++ +LG   +  +  +L+ MY + G                          
Sbjct: 105 RKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAG 164

Query: 290 ------VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL-HGPRPDRVT 342
                 +++A++LF E   +++V  N ++S YV  G  +EAL +  EM++    RPD  T
Sbjct: 165 YVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDEST 224

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M++ VSA AQ   +  GR  H ++  +G      I N +ID+Y K G             
Sbjct: 225 MVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFG------------- 271

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                             +VE+A E+F  +  +D ISWNT++GG T  N+++EA+ LF+ 
Sbjct: 272 ------------------EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQE 313

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQ-LATALVDMFAR 519
           ML      + VTM+ +  AC +LGA+D+ +WI+ YI K   G+  ++  L T+L+DM+A+
Sbjct: 314 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAK 373

Query: 520 CGDPQRAMQVF-RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           CGD   A QVF   M  R +S W A I   AM G    A ++F+ M   GI+PD I FVG
Sbjct: 374 CGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVG 433

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L+ACSH G+++ G ++FRSMT  + ++P++ HYGCM+DLLG +GL  EA ++I +MP+E
Sbjct: 434 LLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME 493

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+ VIW SLL AC+ H N+++    A+++ +++P  SG +VLLSNIYA+AG+W  VA++R
Sbjct: 494 PDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIR 553

Query: 699 LQMKEQGI-RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
             + ++G+ +K+PG SSIE++  VHEF  GD+ HP+   I  ML EM   L +AG+VPD 
Sbjct: 554 ALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDT 613

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
           + VL +++E+ ++  L HHSEKLA+AFGLIST     + ++KNLR+C +CH   KL+SK+
Sbjct: 614 SEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKI 673

Query: 818 YDREIIVRDNNRFHFFRQGSC 838
           Y REII RD  RF  FR G C
Sbjct: 674 YKREIIARDRTRFXHFRDGVC 694



 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 176/564 (31%), Positives = 292/564 (51%), Gaps = 76/564 (13%)

Query: 46  NELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           + ++  H  ++K GL +    +SK++  C     F+   YA   FD   + N     L +
Sbjct: 2   SSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPN-----LLI 56

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++ RG++     V A+ LY+ +   G+LPD +TFPF+L +C KS    EG Q+HG ++
Sbjct: 57  WNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVL 116

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR-------- 217
           K+GFD D++V   LI+ Y + G + D R+VFD  S R+VVS+T+LI     R        
Sbjct: 117 KLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQK 176

Query: 218 ---DLP--------------------KEAVYLFFE-MVEEGIKPNSVTMVCVISACAKLQ 253
              ++P                    KEA+ LF E M+   ++P+  TMV V+SACA+  
Sbjct: 177 LFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSD 236

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           ++ELG  V ++I++ G  +N  +VNAL+D+Y K G V+TA +LF    +++++  NT++ 
Sbjct: 237 SIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIG 296

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV---LRNG 370
            Y  + L +EAL +  EML  G  P+ VTMLS + A A LG +  GR  H Y+   L+  
Sbjct: 297 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGV 356

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFD-HMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           +    S+  ++IDMY KCG  + A ++FD  MSN+++ +WN++I+G   +G   +A ++F
Sbjct: 357 VTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIF 416

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
           S M          M G                      I+ D +T VG+ SAC + G LD
Sbjct: 417 SRM---------RMNG----------------------IEPDDITFVGLLSACSHSGMLD 445

Query: 490 LAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
           L + I+  + +   I   ++    ++D+    G  + A ++   M  + D   W + + A
Sbjct: 446 LGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKA 505

Query: 548 MAMEGNGEQAVELFNEMLRQGIKP 571
             + GN E       ++++  I+P
Sbjct: 506 CKIHGNLELGESFAKKLIK--IEP 527


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/726 (35%), Positives = 400/726 (55%), Gaps = 43/726 (5%)

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM--SERNVVSWTSLICACARRDL 219
            A+ +   D        L+  +   G + D    FD +  + R+ V   +++ A AR  L
Sbjct: 83  AALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASL 142

Query: 220 PKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV- 277
              AV +F  ++  G ++P+  +   +ISA  ++ NL        +   L   A A++  
Sbjct: 143 AAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSV 202

Query: 278 -NALVDMYMKC----------------------------------GAVDTAKQLFGECKD 302
            NAL+ +YMKC                                  G V+ A+ +F E   
Sbjct: 203 SNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG 262

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           +  V+ N ++S YV+ G+  +A  +   M+      D  T  S +SA A  G  + G+  
Sbjct: 263 KFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSV 322

Query: 363 HGYVLR---NGL-EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           HG ++R   N + E    + N ++ +Y K GK  +A RIFD M+ K VVSWN++++G I 
Sbjct: 323 HGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYID 382

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           +G ++ A EVF  MP ++ +SW  M+ G     + E+A++LF  M +E +K    T  G 
Sbjct: 383 SGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGA 442

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
            +ACG LGAL   + ++A++ + G         AL+ M+A+CG    A  VF  M   D 
Sbjct: 443 IAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDS 502

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W A I A+   G+G +A+ELF++M+ +GI PD I F+ +LTAC+H GLV++G+H F S
Sbjct: 503 VSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFES 562

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M    G+SP   HY  ++DLLGR+G +GEA DLIK+MP EP   IW ++L+ C+ + +++
Sbjct: 563 MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 622

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
             AYAA+++  + P+  G ++LLSN Y++AG+W + ARVR  M+++G++K PG S IEV 
Sbjct: 623 FGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVG 682

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
            K+H F  GD  HPE   +   L  +  R+R  GYVPD   VL D++  EK+Y+L  HSE
Sbjct: 683 SKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSE 742

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLA+ FGL+       + V+KNLR+C DCH+    +SK   REI+VRD  RFH F+ G C
Sbjct: 743 KLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGEC 802

Query: 839 SCSDFW 844
           SC ++W
Sbjct: 803 SCGNYW 808



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 227/536 (42%), Gaps = 105/536 (19%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTK--SSAFGEGVQVH 161
           ++N+++  ++   L   A+S++  L G G L PD ++F  +++A  +  + A     Q+H
Sbjct: 129 LHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLH 188

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIV---DGRRVFDEMSERNVVSWTSLICACARR- 217
            +++K G    + V N LI  Y +C       D R+V DEM +++ ++WT+++    RR 
Sbjct: 189 CSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRG 248

Query: 218 ------------------------------DLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                                          +  +A  LF  MV E +  +  T   V+S
Sbjct: 249 DVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLS 308

Query: 248 ACAKLQNLELGDRVCAYIDELG---MKANALMV-NALVDMYMKCGAVDTAKQLFGECKDR 303
           ACA       G  V   I  L    +   AL V NALV +Y K G +  AK++F     +
Sbjct: 309 ACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK 368

Query: 304 NLVLCNTIM-------------------------------SNYVRLGLAREALAILDEML 332
           ++V  NTI+                               S YV  GL+ +AL + ++M 
Sbjct: 369 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 428

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               +P   T   A++A  +LG L  GR  H ++++ G E  +S  N ++ MY KCG   
Sbjct: 429 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 488

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +F  M N   VSWN++I+ L ++G             GR                 
Sbjct: 489 DARLVFLVMPNLDSVSWNAMISALGQHGH------------GR----------------- 519

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLAT 511
             EA+ELF  M++E I  DR++ + + +AC + G +D     +  ++++ GI        
Sbjct: 520 --EALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 577

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
            L+D+  R G    A  + + M  +   S W A +      G+ E      +++ R
Sbjct: 578 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFR 633



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 215/469 (45%), Gaps = 68/469 (14%)

Query: 35  SIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY-- 92
           ++G + N        Q HC +LK G     S  + ++    +  T E+   A+K  D   
Sbjct: 172 AVGQMHNLAA-PHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMP 230

Query: 93  -------------YIKDNETSA--TLF---------MYNSLIRGYSCIGLGVEAISLYVE 128
                        Y++  + +A  ++F         ++N++I GY   G+  +A  L+  
Sbjct: 231 DKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRR 290

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM--GF--DRDVFVENCLINFYG 184
           +    +  D+FTF  VL+AC  +  F  G  VHG I+++   F  +  + V N L+  Y 
Sbjct: 291 MVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYS 350

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTS-------------------------------LICA 213
           + G IV  +R+FD M+ ++VVSW +                               ++  
Sbjct: 351 KGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSG 410

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
                L ++A+ LF +M  E +KP   T    I+AC +L  L+ G ++ A++ + G +A+
Sbjct: 411 YVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS 470

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
               NAL+ MY KCGAV+ A+ +F    + + V  N ++S   + G  REAL + D+M+ 
Sbjct: 471 NSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA 530

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQE 392
            G  PDR++ L+ ++A    G +  G      + R+ G+   +     +ID+  + G+  
Sbjct: 531 EGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIG 590

Query: 393 MACRIFDHMSNKTVVS-WNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
            A  +   M  +   S W ++++G   NGD+E    +A ++F  +P  D
Sbjct: 591 EARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHD 639



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 18/203 (8%)

Query: 20  LTNQHKAK-TTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCA 75
           L NQ +A+   P D    G++  C  L  LK   Q H H+++ G     S  + ++   A
Sbjct: 423 LFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYA 482

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL 135
           + G             + +  N  S +   +N++I      G G EA+ L+ ++   GI 
Sbjct: 483 KCGAVNDARLV-----FLVMPNLDSVS---WNAMISALGQHGHGREALELFDQMVAEGID 534

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVK---MGFDRDVFVENCLINFYGECGDIVDG 192
           PD+ +F  +L AC  +    EG     ++ +   +    D +    LI+  G  G I + 
Sbjct: 535 PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYAR--LIDLLGRSGRIGEA 592

Query: 193 RRVFDEMSERNVVS-WTSLICAC 214
           R +   M      S W +++  C
Sbjct: 593 RDLIKTMPFEPTPSIWEAILSGC 615


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 266/772 (34%), Positives = 413/772 (53%), Gaps = 66/772 (8%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT---FPFVLNACTKSSAFGEGVQVHGA 163
           N+ +  +S  G  V++  L  E  G  + P +F    +   L  C +      G  +H  
Sbjct: 5   NNFLIQFSRRGFSVQSAKLTQEFVGH-VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           I+K G   D+F  N L+N Y +   + D  ++FDEM ERN +S+ +LI   A      EA
Sbjct: 64  ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEA 123

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + LF  +  EG + N      ++         ELG  + A I +LG ++NA +  AL+D 
Sbjct: 124 IELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDA 183

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y  CG VD A+++F     +++V    +++ +      +EAL +  +M + G +P+  T 
Sbjct: 184 YSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTF 243

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            S   A   L     G+  HG  L++  E         +D+Y+                 
Sbjct: 244 ASVFKACLGLEAFDVGKSVHGCALKSRYE---------LDLYVGV--------------- 279

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                  +L+    K+GD++ AR  F E+P +D I W+ M+    Q +  +EA+E+F  M
Sbjct: 280 -------ALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQM 332

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
               +  ++ T   V  AC  +  L+L   I+ ++ K G+H D+ ++ AL+D++A+CG  
Sbjct: 333 RQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRM 392

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ---------------- 567
           + +M++F     R+   W   I      G+GE+A+ LF  ML                  
Sbjct: 393 ENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 452

Query: 568 ---------------GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
                           +KPD + FVGVL+AC++ GL++QG   F SM   HG+ P I HY
Sbjct: 453 ASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHY 512

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CMV LLGR G L +A+ LI  +P +P+ ++W +LL AC  H ++++   +A+R+ E++P
Sbjct: 513 TCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEP 572

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           +    HVLLSN+YA+A +W NVA VR  MK +G++K PG S IE  G VH FT GD SHP
Sbjct: 573 QDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHP 632

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           E+  I+ ML  ++ + + AGY+P+   VLLDV+++EK+ LL  HSE+LA++FG+I T   
Sbjct: 633 EVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSG 692

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PIR++KNLR+C DCH+  K +SKV  REI+VRD NRFH F++G CSC D+W
Sbjct: 693 SPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 159/370 (42%), Gaps = 27/370 (7%)

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF-DYYIKDNET-----------SAT 102
           + K  LG +   + K V  CA    +E   Y   A  D Y K  +               
Sbjct: 246 VFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKD 305

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +  ++ +I  Y+      EA+ ++ ++    +LP++FTF  VL AC        G Q+H 
Sbjct: 306 VIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHC 365

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            ++K+G   DVFV N L++ Y +CG + +   +F E   RN V+W ++I    +    ++
Sbjct: 366 HVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEK 425

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+ LF  M+E  ++   VT    + ACA L  LE G +    I  L +K + L    ++ 
Sbjct: 426 ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ----IHSLTVKPDKLTFVGVLS 481

Query: 283 MYMKCGAVDTAKQLFGE-CKDRNLVLCNTIMSNYV----RLGLAREALAILDEMLLHGPR 337
                G +D  +  F    +D  +  C    +  V    R G   +A+ ++DE+     +
Sbjct: 482 ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPF---Q 538

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI-DMYMKCGKQEMACR 396
           P  +   + + A     D+  GR+    VL   +E  D   + ++ +MY    + +    
Sbjct: 539 PSVMVWRALLGACVIHNDIELGRISAQRVLE--MEPQDKATHVLLSNMYATAKRWDNVAS 596

Query: 397 IFDHMSNKTV 406
           +  +M  K V
Sbjct: 597 VRKNMKRKGV 606



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 23/251 (9%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVC 72
            V       +A   P        L+ C T+  L    Q HCH++K GL H   ++S    
Sbjct: 325 AVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGL-HSDVFVSN--- 380

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
             A M  +      + + + + +    +     +N++I G+  +G G +A+ L++ +  +
Sbjct: 381 --ALMDVYAKCGRMENSMELFAESPHRNDV--TWNTVIVGHVQLGDGEKALRLFLNMLEY 436

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
            +   + T+   L AC   +A   G+Q+H   VK   D+  FV   +++     G +  G
Sbjct: 437 RVQATEVTYSSALRACASLAALEPGLQIHSLTVKP--DKLTFVG--VLSACANAGLLDQG 492

Query: 193 RRVFDEMSERN-----VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
           +  F  M + +     +  +T ++    R     +AV L  E+     +P+ +    ++ 
Sbjct: 493 QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLG 549

Query: 248 ACAKLQNLELG 258
           AC    ++ELG
Sbjct: 550 ACVIHNDIELG 560


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/673 (36%), Positives = 391/673 (58%), Gaps = 12/673 (1%)

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
           +F  N ++  Y +   I      F++M+ER+VVSW  +I A ++    +EA+ L  EM  
Sbjct: 194 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 253

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
           +G++ +S T    ++ACA+L +L  G ++ A +     + +  + +AL+++Y KCG+   
Sbjct: 254 KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKE 313

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           AK++F   +DRN V    ++   ++     +++ + ++M       D+  + + +S    
Sbjct: 314 AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 373

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
             DL  GR  H   L++G      + N++I +Y KCG  + A  +F  MS + +VSW S+
Sbjct: 374 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 433

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVD 471
           I    + G++  ARE F  M  R+ I+WN MLG   Q    E+ ++++  MLS++ +  D
Sbjct: 434 ITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 493

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
            VT V +   C  +GA  L   I  +  K G+  ++ +A A + M+++CG    A ++F 
Sbjct: 494 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 553

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            +  +DV +W A I   +  G G+QA + F++ML +G KPD I +V VL+ CSH GLV +
Sbjct: 554 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 613

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
           G   F  MT +HG+SP + H+ CMVDLLGRAG L EA DLI  MP++P   +WG+LL+AC
Sbjct: 614 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 673

Query: 652 QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
           + H N ++A  AA+ + ELD   SG ++LL+ IY+ AGK  + A+VR  M+++GI+K PG
Sbjct: 674 KIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 733

Query: 712 SSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
            S +EV  KVH F + D SHP++  I + + E+  ++   GYV             E   
Sbjct: 734 YSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPR 782

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
              HHSEKLA+AFG++S    MPI ++KNLR+C DCH+  KL+S V DRE ++RD  RFH
Sbjct: 783 SEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFH 842

Query: 832 FFRQGSCSCSDFW 844
            F+ GSCSC D+W
Sbjct: 843 HFKSGSCSCGDYW 855



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 141/566 (24%), Positives = 249/566 (43%), Gaps = 68/566 (12%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           + C  + +  +  L     A +Y+  ++     +  +N +I   S  G   EA+ L VE+
Sbjct: 194 IFCRNSMLAGYAKLYGIDHAIEYF--EDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              G+  D  T+   L AC +  + G G Q+H  +++     D +V + LI  Y +CG  
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            + +RVF+ + +RN VSWT LI    + +   ++V LF +M  E +  +   +  +IS C
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
               +L LG ++ +   + G     ++ N+L+ +Y KCG +  A+ +F    +R++V   
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431

Query: 310 TIMSNYVRLG---LAREAL------------AILDEMLLHGPR----------------- 337
           ++++ Y ++G    ARE              A+L   + HG                   
Sbjct: 432 SMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 491

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD VT ++     A +G    G    G+ ++ GL    S+ N  I MY KCG+   A ++
Sbjct: 492 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 551

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD ++ K VVSWN++I G  ++G                               M ++A 
Sbjct: 552 FDLLNGKDVVSWNAMITGYSQHG-------------------------------MGKQAA 580

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDM 516
           + F  MLS+  K D ++ V V S C + G +   K  +  + + +GI   ++  + +VD+
Sbjct: 581 KTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDL 640

Query: 517 FARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
             R G    A  +  +M  K     W A + A  + GN E A EL  + + +   PDS  
Sbjct: 641 LGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA-ELAAKHVFELDSPDSGS 699

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTD 601
           ++ +    S  G  +    + + M D
Sbjct: 700 YMLLAKIYSDAGKSDDSAQVRKLMRD 725



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 229/519 (44%), Gaps = 75/519 (14%)

Query: 134 ILPDKFTFPFV--LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
           +LP   T      L +C    A      +HG +V +G    VF++N L++ Y  CG + D
Sbjct: 14  LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSD 73

Query: 192 GRRVFD-EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM------VC 244
            RR+   ++ E NV++   ++   A++    +A  LF  M    +   +  M        
Sbjct: 74  ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAG 133

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
              +C  L   EL  ++     +     +  +  ALVDM+++CG VD A +LF + +   
Sbjct: 134 SWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPT 193

Query: 305 LVLCNTIMSNYVRL-------------------------------GLAREALAILDEMLL 333
           +   N++++ Y +L                               G  REAL ++ EM  
Sbjct: 194 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 253

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G R D  T  S+++A A+L  L  G+  H  V+R+  +    + + +I++Y KCG  + 
Sbjct: 254 KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKE 313

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A R+F+ + ++  VSW  LI                               GG  Q   F
Sbjct: 314 AKRVFNSLQDRNSVSWTVLI-------------------------------GGSLQYECF 342

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
            +++ELF  M +E + +D+  +  + S C     L L + +++   K+G +  + ++ +L
Sbjct: 343 SKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 402

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           + ++A+CGD Q A  VF  M +RD+ +WT+ I A +  GN  +A E F+ M  +    ++
Sbjct: 403 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NA 458

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           I +  +L A    G    G  ++ +M     V+P  V Y
Sbjct: 459 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 497



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 206/434 (47%), Gaps = 19/434 (4%)

Query: 237 PNSVT--MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           P++VT  +   + +C     L     +   +  +G+ +   + N L+  Y+ CGA+  A+
Sbjct: 16  PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75

Query: 295 QLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV---TMLSAVSAS 350
           +L   + K+ N++  N +M+ Y + G   +A  + D M    PR D     T++S  S  
Sbjct: 76  RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRM----PRRDVASWNTLMSDTSRP 131

Query: 351 A----QLGDLLCGRMCH---GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           A      G L C  +     G   +    G   +   ++DM+++CG  + A R+F  +  
Sbjct: 132 AGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER 191

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
            T+   NS++AG  K   ++ A E F +M  RD +SWN M+  L+Q     EA+ L   M
Sbjct: 192 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
             + +++D  T     +AC  L +L   K ++A + ++    D  +A+AL++++A+CG  
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           + A +VF  ++ R+  +WT  IG         ++VELFN+M  + +  D      +++ C
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
            +   +  G  L  S+    G +  IV    ++ L  + G L  A  +  SM  E + V 
Sbjct: 372 FNRMDLCLGRQL-HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVS 429

Query: 644 WGSLLAACQKHQNV 657
           W S++ A  +  N+
Sbjct: 430 WTSMITAYSQIGNI 443


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/649 (37%), Positives = 381/649 (58%), Gaps = 36/649 (5%)

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           +V SW S+I   AR     EA+  F  M +  + P   +  C I AC+ L ++  G +  
Sbjct: 40  DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                 G +++  + +AL+ MY  CG ++ A+++F E   RN+V   +++  Y   G A 
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159

Query: 323 EALAILDEMLLHGPRPD------RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           +A+++  ++L+     D       + M+S +SA +++         H +V++ G +   S
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVS 219

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + NT++D Y K G+                             G V  AR++F ++  +D
Sbjct: 220 VGNTLLDAYAKGGE-----------------------------GGVAVARKIFDQIVDKD 250

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERI-KVDRVTMVGVASACGYLGALDLAKWIY 495
            +S+N+++    Q  M  EA ++FR ++ E++   + +T+  V  A  + GAL + K I+
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIH 310

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
             + + G+  D+ + T+++DM+ +CG  + A   F RM+ ++V +WTA I    M G+  
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAA 370

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+ELF  M+  G++P+ I FV VL ACSH GL + GWH F +M    GV P + HYGCM
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCM 430

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLLGRAG L +A DLI+ M +EP+ +IW SLLAAC+ H+NV++A  +  R+ ELDP   
Sbjct: 431 VDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNC 490

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G ++LLS+IYA +G+W +V RVR+ MK +G+ K PG S +E+NG+VH F  GDE HP+  
Sbjct: 491 GYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            I   L E+N +L +AGYV + ++V  DVDE+EK+  L  HSEKLA+AFG+++T     +
Sbjct: 551 KIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTV 610

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            VVKNLR+C DCH+  KL+SK+ DRE +VRD  RFH F+ G CSC D+W
Sbjct: 611 NVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 231/479 (48%), Gaps = 46/479 (9%)

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F+ Y+   +    +F +NS+I   +  G   EA+  +  +    + P + +FP  + AC+
Sbjct: 32  FNRYVDKTD----VFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACS 87

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
                  G Q H      G+  D+FV + LI  Y  CG + D R+VFDE+ +RN+VSWTS
Sbjct: 88  SLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147

Query: 210 LICACARRDLPKEAVYLFFE-MVEEG-----IKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +I          +AV LF + ++EE      +  +S+ MV VISAC+++    L + + +
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHS 207

Query: 264 YIDELGMKANALMVNALVDMYMKC--GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
           ++ + G      + N L+D Y K   G V  A+++F +  D++ V  N+IMS Y + G++
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267

Query: 322 REALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            EA  +   ++       + +T+ + + A +  G L  G+  H  V+R GLE    +  +
Sbjct: 268 NEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMY KCG+ E A   FD M NK V SW ++IAG   +G                    
Sbjct: 328 IIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHA------------------ 369

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIE 499
                         +A+ELF  M+   ++ + +T V V +AC + G  D+   W  A   
Sbjct: 370 -------------AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKG 416

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           + G+   ++    +VD+  R G  Q+A  + ++M+ + D   W++ + A  +  N E A
Sbjct: 417 RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELA 475



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 207/435 (47%), Gaps = 38/435 (8%)

Query: 13  ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISK 69
           +   +   ++  K    P  S    ++K C +L ++   KQ H      G        S 
Sbjct: 57  SAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSA 116

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++   +  G  E    A+K FD   K N  S     + S+IRGY   G  ++A+SL+ +L
Sbjct: 117 LIVMYSTCGKLED---ARKVFDEIPKRNIVS-----WTSMIRGYDLNGNALDAVSLFKDL 168

Query: 130 A------GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
                     +  D      V++AC++ +A G    +H  ++K GFDR V V N L++ Y
Sbjct: 169 LIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228

Query: 184 GECGD--IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP-NSV 240
            + G+  +   R++FD++ +++ VS+ S++   A+  +  EA  +F  +++E +   N +
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCI 288

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T+  V+ A +    L +G  +   +  +G++ + ++  +++DMY KCG V+TA+  F   
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRM 348

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG------ 354
           K++N+     +++ Y   G A +AL +   M+  G RP+ +T +S ++A +  G      
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGW 408

Query: 355 ---DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWN 410
              + + GR    + +  GLE +      M+D+  + G  + A  +   M      + W+
Sbjct: 409 HWFNAMKGR----FGVEPGLEHY----GCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWS 460

Query: 411 SLIAGLIKNGDVESA 425
           SL+A    + +VE A
Sbjct: 461 SLLAACRIHKNVELA 475


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/626 (39%), Positives = 369/626 (58%), Gaps = 40/626 (6%)

Query: 256  ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
            +L  ++C   D   + +N  +   L+  Y  CG   + + +F E   +N+V  N ++ +Y
Sbjct: 1045 KLHSKICIDHD---LHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSY 1101

Query: 316  VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            V   L  +AL +   M  HG  PD  T    + AS+   DL  G   H  V+R GL+   
Sbjct: 1102 VNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNV 1161

Query: 376  SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA---------- 425
             + N +I MY KCG    ACR+ D M  + VVSWNSL+AG  +NG  + A          
Sbjct: 1162 FVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELL 1221

Query: 426  ---------------------------REVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                       +E+F ++  +  +SWN M+      +M  EA++
Sbjct: 1222 GLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVD 1281

Query: 459  LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
            +F  M    +  D +++  V  ACG L AL L + I+ Y+ +  +  ++ L  AL+DM+A
Sbjct: 1282 IFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYA 1341

Query: 519  RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
            +CG  + A +VF +M+ RDV +WT+ I A  M G G  AV LF+ M   G+ PDSI FV 
Sbjct: 1342 KCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVS 1401

Query: 579  VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
            VL+ACSH GL+++G + F+ MT+   + P+I H+ CMVDLLGRAG + EA   IK MP+E
Sbjct: 1402 VLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPME 1461

Query: 639  PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
            PN+ +WG+LL+AC+ + N+ I   AA+++ +L PE+SG +VLLSNIYA AG+W +V  VR
Sbjct: 1462 PNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVR 1521

Query: 699  LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
              MK +GI+K+PG S+ E++ +VH F +GD+SHP+   I   L  +  ++++AGYVP+  
Sbjct: 1522 SIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETD 1581

Query: 759  NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            + L DV+E++K+  L+ HSEKLA+AF +++T+   PIR+ KNLR+C DCH  AKL+SK+ 
Sbjct: 1582 SALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIV 1641

Query: 819  DREIIVRDNNRFHFFRQGSCSCSDFW 844
             REI +RD NRFH F  G CSC D+W
Sbjct: 1642 GREITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 217/463 (46%), Gaps = 66/463 (14%)

Query: 93   YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
            +I D      +  +N +IR Y    L  +A+ ++  +AG GI PD +T+P VL A + S 
Sbjct: 1081 HIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSE 1140

Query: 153  AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
                G+Q+H A+V++G D +VFV N LI+ YG+CG +V+  RV DZM  R+VVSW SL+ 
Sbjct: 1141 DLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVA 1200

Query: 213  ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             CAR     +A+ +  EM   G+KP++ TM  ++ A                        
Sbjct: 1201 GCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA------------------------ 1236

Query: 273  NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
               + N  +D       V   K++F +  +++LV  N +++ Y+   +  EA+ I  +M 
Sbjct: 1237 ---VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME 1287

Query: 333  LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             H   PD +++ S + A   L  LL GR  H YV+R  L+    + N +IDMY KCG  E
Sbjct: 1288 DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 1347

Query: 393  MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
             A  +FD M  + VVSW S+I+    NG             GRD +S             
Sbjct: 1348 YAREVFDQMKFRDVVSWTSMISAYGMNGK------------GRDAVS------------- 1382

Query: 453  FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLAT 511
                  LF  M    +  D +  V V SAC + G LD  ++ +  + E+  I   ++   
Sbjct: 1383 ------LFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV 1436

Query: 512  ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
             +VD+  R G    A    ++M  + +   W A + A  +  N
Sbjct: 1437 CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 1479


>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/539 (44%), Positives = 336/539 (62%), Gaps = 26/539 (4%)

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N ++++Y +    R AL +  ++       D     S + A  Q+     G+  HG+VL+
Sbjct: 128 NFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLK 187

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI----KNGDVES 424
            GL+    + N ++ MY +C   E A  +FD M  + VVSW      L+    K G +  
Sbjct: 188 KGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGL 247

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           AR++F+ +  +  +SW  M+ G  + N  EE  +LF  M  E I  + +TM         
Sbjct: 248 ARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM--------- 298

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
                        + K  +  D  L TALVDM+A+CGD   A ++F     RD+  W A 
Sbjct: 299 -------------LNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 345

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I   AM G GE+A+++F EM RQG+KP+ I F+G+L ACSH GLV +G  LF  M    G
Sbjct: 346 ITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFG 405

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + PQI HYGCMVDLLGRAGLL EA ++IKSMP++PN ++WG+L+AAC+ H+N  +   AA
Sbjct: 406 LVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAA 465

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
            ++ E++PE  G +VL+SNIYA+A +W++ A VR  MK  G++K PG S IEVNG VHEF
Sbjct: 466 TQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEF 525

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
             GD+SHP++  I+ ML EM  +L +AGYVPD + VLL++DE+EK+  L++HSEKLAMAF
Sbjct: 526 LMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAF 585

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           GLIST+ + PIR+VKNLR+C DCH+  KL+SK+Y R IIVRD NRFH FR+G CSC D+
Sbjct: 586 GLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 184/455 (40%), Gaps = 112/455 (24%)

Query: 2   ALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLG 61
            L  NP+PL                  TP  SPS   L    TL + KQ H HI+K    
Sbjct: 68  TLKFNPTPL-----------------QTPPTSPSQHDLS---TLEQTKQIHAHIIKTHFH 107

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
           H                        Q   + +      SA    +N +I  Y+       
Sbjct: 108 HA----------------------LQIPLNDFPSGLSPSA---QWNFVITSYTKRNQPRN 142

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A+++Y +L       D F  P VL AC + S    G ++HG ++K G DRDVFV N L+ 
Sbjct: 143 ALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALML 202

Query: 182 FYGECGDIVDGRRVFDEMSERN-----------------------------------VVS 206
            YGEC  +   R VFD+M ER+                                   VVS
Sbjct: 203 MYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 262

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           WT++I  C R +  +E   LF  M EE I PN +TM                      ++
Sbjct: 263 WTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM----------------------LN 300

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           +  ++ + ++  ALVDMY KCG ++ A +LF E   R++ + N I++ +   G   EAL 
Sbjct: 301 KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALD 360

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTM 381
           I  EM   G +P+ +T +  + A +  G +  G     +M H + L   +E +      M
Sbjct: 361 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHY----GCM 416

Query: 382 IDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAG 415
           +D+  + G  + A  +   M  K   + W +L+A 
Sbjct: 417 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 451



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 102/263 (38%), Gaps = 54/263 (20%)

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
            WN ++   T+ N    A+ ++  +     +VD      V  ACG +    L K I+ ++
Sbjct: 126 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 185

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW----TAAIGAMAMEGNG 554
            K G+  D+ +  AL+ M+  C   + A  VF +M +RDV +W    TA +   A  G+ 
Sbjct: 186 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHL 245

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD------------- 601
             A +LFN + ++ +    + +  ++  C     + +G  LF  M +             
Sbjct: 246 GLARQLFNGLTQKTV----VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNK 301

Query: 602 ------------------------------IHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
                                         I  +S  I  +  ++      G   EALD+
Sbjct: 302 ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDI 361

Query: 632 IKSMP---VEPNDVIWGSLLAAC 651
              M    V+PND+ +  LL AC
Sbjct: 362 FAEMERQGVKPNDITFIGLLHAC 384



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           M+N++I G++  G G EA+ ++ E+   G+ P+  TF  +L+AC+ +    EG ++   +
Sbjct: 341 MWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKM 400

Query: 165 VK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARRDLPK 221
           V   G    +    C+++  G  G + +   +   M  + N + W +L+ AC     P+
Sbjct: 401 VHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 459


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/783 (34%), Positives = 420/783 (53%), Gaps = 86/783 (10%)

Query: 145 LNACTKS--SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           LN C     S++     VHG ++  GF     + N LI+ Y +  D V  R++FDE+ + 
Sbjct: 18  LNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQP 77

Query: 203 NVVSWTSLICACAR-------RDLPKE--------------------------AVYLFFE 229
           +V++ T+LI A +        R++  E                          A+ LF  
Sbjct: 78  DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID----ELGMKANALMVNALVDMYM 285
           M     +P+  T   V+SA   +      +R C  +     + G++    ++NAL+ +Y+
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIF---YDERQCGQMHGTVVKFGIEIFPAVLNALLSVYV 194

Query: 286 KCGA---------VDTAKQLFGECKDRNLVLCNTIMSNYVR------------------- 317
           KC +         + +A++LF E   RN  +  T+++ YVR                   
Sbjct: 195 KCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPG 254

Query: 318 ------------LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
                        GL  +AL +  +M L G + D  T  S +SA A  G  L G+  H Y
Sbjct: 255 IAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAY 314

Query: 366 VLRNGL----EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
           +L+N L    +   S+ NT+I +Y K GK + A +IF  M  K +++WN+L++G +  G 
Sbjct: 315 ILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGR 374

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           +E A+  F++MP ++ ++W  M+ GL Q    E+A++LF  M  +  + +     G  +A
Sbjct: 375 MEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITA 434

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  LGAL+  + ++A I   G    + +  A++ M+ARCG  + A  +F  M   D  +W
Sbjct: 435 CSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSW 494

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            + I A+   G+G +A+EL+ +ML++GI PD   F+ VL+ACSH GLV +G   F SM +
Sbjct: 495 NSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE 554

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            +G++P   HY  M+DL  RAG   +A ++I SMP E    IW +LLA C+ H N+D+  
Sbjct: 555 NYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGI 614

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
            AAE++ +L P+  G +VLLSN+YAS G+W +VAR R  M+++G++K P  S  EV  KV
Sbjct: 615 EAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKV 674

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           H F   D  HPE+ +I + L ++N  ++  GY+PD   VL D++ + K+Y LS HSEKLA
Sbjct: 675 HVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLA 734

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +AFGL+   +   +RV KNLR+C DCH+  K +SKV  REI+VRD  RFH F+ G CSC 
Sbjct: 735 VAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCR 794

Query: 842 DFW 844
           ++W
Sbjct: 795 NYW 797



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 227/542 (41%), Gaps = 113/542 (20%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV--QVHG 162
            YN++I GYS +  G  AI L+  +      PD FTF  VL+A T    + E    Q+HG
Sbjct: 114 FYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSAST-LIFYDERQCGQMHG 172

Query: 163 AIVKMG------------------------------------FD----RDVFVENCLINF 182
            +VK G                                    FD    R+ F+   LI  
Sbjct: 173 TVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITG 232

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y   GD+   R + D M+E+  ++W ++I       L ++A+ LF +M   G++ +  T 
Sbjct: 233 YVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTY 292

Query: 243 VCVISACAKLQNLELGDRVCAYI--DELGMKANALMV--NALVDMYMKCGAVDTAKQLFG 298
             VISACA      LG +V AYI  +EL    + L+   N L+ +Y K G VD A+++F 
Sbjct: 293 TSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFY 352

Query: 299 ECKDRNLVLCNTIMSNYVRL-------------------------------GLAREALAI 327
           E   ++++  NT++S YV                                 G   +AL +
Sbjct: 353 EMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKL 412

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
            ++M L G  P+      A++A + LG L  GR  H  ++  G +   S+ N MI MY +
Sbjct: 413 FNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYAR 472

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  E A  +F  M     VSWNS+IA L ++G                         G+
Sbjct: 473 CGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGH------------------------GV 508

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCD 506
                  +A+EL+  ML E I  DR T + V SAC + G ++   ++  + +E  GI   
Sbjct: 509 -------KAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPG 561

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRM--EKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
                 ++D+F R G    A  V   M  E R    W A +      GN +  +E   ++
Sbjct: 562 EDHYARMIDLFCRAGKFSDAKNVIDSMPFEAR-APIWEALLAGCRTHGNMDLGIEAAEKL 620

Query: 565 LR 566
            +
Sbjct: 621 FK 622



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 193/411 (46%), Gaps = 43/411 (10%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D  T      +N++I GY   GL  +A++L+ ++   G+  D+ T+  V++AC     
Sbjct: 245 ILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGF 304

Query: 154 FGEGVQVHGAIVK--MGFDRDVF--VENCLINFYGECGDIVDGRRVFDE----------- 198
           F  G QVH  I+K  +  DRD    V N LI  Y + G +   R++F E           
Sbjct: 305 FLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNT 364

Query: 199 --------------------MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
                               M E+N+++WT +I   A+    ++A+ LF +M  +G +PN
Sbjct: 365 LLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPN 424

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
                  I+AC+ L  LE G ++ A I  LG  +   + NA++ MY +CG V+ A+ +F 
Sbjct: 425 DYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFL 484

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
                + V  N++++   + G   +A+ + ++ML  G  PDR T L+ +SA +  G +  
Sbjct: 485 TMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEE 544

Query: 359 GRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGL 416
           G      +L N G+   +     MID++ + GK   A  + D M  +     W +L+AG 
Sbjct: 545 GNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGC 604

Query: 417 IKNGD----VESAREVFSEMPGRD--HISWNTMLGGLTQENMFEEAMELFR 461
             +G+    +E+A ++F  +P  D  ++  + M   L + N      +L R
Sbjct: 605 RTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMR 655


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 273/782 (34%), Positives = 441/782 (56%), Gaps = 56/782 (7%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP-DKFT 140
           SL  A++AFD   + ++    +  +N++I  +   G   EA+ L+ ++   G  P +  T
Sbjct: 191 SLIDAKQAFDRLPRASKRD--VVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVT 248

Query: 141 FPFVLNACTKSSAFG-EGVQ-VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF-- 196
           F  VL++C ++     E V+ +HG IV  G +R+ FV   L++ YG+ G + D   VF  
Sbjct: 249 FVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLR 308

Query: 197 --DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
             DE    ++V+ +++I AC +   P+E++ LFF M  EG KP+ VT+V V++AC+ LQ 
Sbjct: 309 KGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQ- 367

Query: 255 LELGDRVCAYIDELGMKA-----NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             +G    A++ E  M+      + ++   L+  Y +   +  A+  F   +  ++V  N
Sbjct: 368 --VGS-ATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWN 424

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA----QLGDLLCGRMCHGY 365
            + + Y++   +REAL + + MLL G RP   T ++A++A A    Q    + G+     
Sbjct: 425 AMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI-GKRIQSL 483

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +   GLEG  ++ N  ++MY KCG    A  +F+ +S                      A
Sbjct: 484 LEEAGLEGDTAVANATLNMYAKCGSLADARAVFERIS---------------------PA 522

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVASACGY 484
           R        RD I+WN+ML       + +EA ELF+ M +E+ +K ++VT V V  A   
Sbjct: 523 R--------RDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTS 574

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME--KRDVSAWT 542
             ++   + I+A +  NG   D  +  AL++M+A+CG    A  +F +    + DV AWT
Sbjct: 575 RTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWT 634

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + I   A  G  E+A++LF  M +QG++P+ + F+  LTAC+HGG + QG  L   MT  
Sbjct: 635 SLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPD 694

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           HG+ P   H+ C+VDLLGR G L EA  L++    + + + W +LL AC+  + ++    
Sbjct: 695 HGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGER 753

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
            AERI +LDPE +  +++L+++YA+AG+W   A +R  M ++GIR  PG S++EVN ++H
Sbjct: 754 CAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELH 813

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F++GD+SHP+   I   L  ++  ++ AGYV D   VL DV ++ K+ LL  HSEKLA+
Sbjct: 814 SFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAI 873

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGL+ST    P+RV+KNLR+C DCH+  KL+SKV  R+I++RD++R+H F  G+CSC D
Sbjct: 874 AFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGD 933

Query: 843 FW 844
           +W
Sbjct: 934 YW 935



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 240/520 (46%), Gaps = 57/520 (10%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK--DNETSA 101
           +L +++  H  I+  G+  +    + +V +  ++G+ +       A++ +++  D E S 
Sbjct: 263 SLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDD------AWEVFLRKGDEEPST 316

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT-----KSSAFGE 156
           +L   +++I      G   E++ L+  +   G  P   T   VLNAC+      ++AF  
Sbjct: 317 SLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAF-- 374

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
              +  A+  +   RD  +   L+  Y    D+   R  FD +   +VVSW ++  A  +
Sbjct: 375 --VLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQ 432

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL---QNLELGDRVCAYIDELGMKAN 273
               +EA+ LF  M+ EG++P+  T +  ++ACA         +G R+ + ++E G++ +
Sbjct: 433 HHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGD 492

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNTIMSNYVRLGLAREALAILDEM 331
             + NA ++MY KCG++  A+ +F       R+ +  N++++ Y   GL +EA  +   M
Sbjct: 493 TAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAM 552

Query: 332 LLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
                 +P++VT ++ + AS     +  GR  H  V+ NG E    I N +++MY KCG 
Sbjct: 553 EAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGS 612

Query: 391 QEMACRIFDHMSN--KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
            + A  IFD  S+  + V++W SLIAG  + G                            
Sbjct: 613 LDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQA-------------------------- 646

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDM 507
                E A++LF  M  + ++ + VT +   +AC + G L+   + +      +GI    
Sbjct: 647 -----ERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPAS 701

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           +  + +VD+  RCG    A ++  R  + DV  W A + A
Sbjct: 702 KHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDA 741



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 240/527 (45%), Gaps = 44/527 (8%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFD--RDVFVENCLINFYGECGDIVDGRRVFD 197
           T+  +L AC +  A  +G ++H  I+    D     F+ + LI  + +CG++ +   + D
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
             +  +V S T++I A      P +A+ LF  M    ++PN   ++ +++AC+ L NL  
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAA 159

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG---ECKDRNLVLCNTIMSN 314
           G R+ + I +   + N+++ NAL+ MY KCG++  AKQ F        R++V  N ++S 
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219

Query: 315 YVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCG--RMCHGYVLRNGL 371
           ++R G AREAL +  +M   G P P+ VT +S + +  + G L     R  HG ++  G+
Sbjct: 220 FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGI 279

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           E    +   ++D Y K G  + A  +F                  ++ GD         E
Sbjct: 280 EREAFVRTALVDSYGKLGSLDDAWEVF------------------LRKGD---------E 312

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
            P    ++ + M+    Q    +E++ LF  M  E  K   VT+V V +AC  L      
Sbjct: 313 EPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSAT 372

Query: 492 KWIYAY-IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            ++    +E      D  L T L+  +AR  D  RA   F  ++  DV +W A   A   
Sbjct: 373 AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQ 432

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH--GGLVNQGWHLFRSMTDIHGVSPQ 608
                +A+ LF  ML +G++P    F+  LTAC+       +      +S+ +  G+   
Sbjct: 433 HHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGD 492

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSM-PVEPNDVIWGSLLAACQKH 654
                  +++  + G L +A  + + + P   + + W S+LAA   H
Sbjct: 493 TAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHH 539


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 276/819 (33%), Positives = 443/819 (54%), Gaps = 61/819 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H   ++ G G      +  +   ++ G  E    AQ+ FD   + +  +  + ++NS
Sbjct: 141 RQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLED---AQRVFD---ETSLLALDILLWNS 194

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
           +I  Y   G  VE + L+ ++   G++ P + T+  V+NAC  S     G  VHG I+K 
Sbjct: 195 IIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKA 254

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
           G +    + N L+ FYG+CG++    ++F+ +S ++VVSW ++I A  +R   + A+ LF
Sbjct: 255 GLE-ATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLF 313

Query: 228 FEM--VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
             M  VE  ++PN VT + ++SA + L  L  G  + A+I  L ++ +  + N+L+  Y 
Sbjct: 314 RRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYS 373

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KC  V  A+++F     R+++  N++++ Y +         I   M+L G  PD  ++  
Sbjct: 374 KCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTI 433

Query: 346 AVSASAQLGDLLC----GRMCHGYVLRNGLEGWDS--ICNTMIDMYMKCGKQEMACRIFD 399
             +A+++    L     G+  HGY+LR    G  S  + N ++ MY K  +         
Sbjct: 434 IFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNR--------- 484

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                 +  A ++F  M  RD  SWN M+ G ++   FE+ + +
Sbjct: 485 ----------------------IADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMI 522

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK--NGIHCDMQ-----LATA 512
           F  +L +   +D V++  + ++CG L +L L K  +A + K  NG  C  Q     +  A
Sbjct: 523 FLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNA 582

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+ M+++CG  + A QVF +ME++DV +WTA I   A  G   +A++LF  M   GIKP+
Sbjct: 583 LISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPN 642

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + F+ +L AC+HGGLV +G + F SM + +G+SP I HY CM+DL GR+G    A  L+
Sbjct: 643 QVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLV 702

Query: 633 KS--MPVEP--NDVI--WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYA 686
           +      +P  +D++  W  LL AC   + +D+   AA +I EL+PE    ++LL+N+YA
Sbjct: 703 EFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYA 762

Query: 687 SAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNC 746
           S+G W +  +VR  M+++G+RK  G S I+   + H F +GD  HP+   I   L ++N 
Sbjct: 763 SSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNY 822

Query: 747 RLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS-KTMPIRVVKNLRLCC 805
             R  GYVP    VL DVDE EK+ +L  HSEKLA++FGL++       IRV+KNLR+C 
Sbjct: 823 SCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCE 882

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCHS+ K  S +  REI++RD+ RFH FR GSCSC D+W
Sbjct: 883 DCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 172/659 (26%), Positives = 296/659 (44%), Gaps = 79/659 (11%)

Query: 27  KTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHK-PSYISKVVCTCAQMGTF----- 80
           K  P+  P + S+K+   +   +  H H+  + L  +   + S+ +  C+    F     
Sbjct: 11  KVPPR--PLLPSIKS--NVTSFRFLHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQS 66

Query: 81  --ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
             E L  AQ+ FD +   +  S     +++LI  YS  G   +A  L+ ++ G G+ P+ 
Sbjct: 67  EHERLKCAQQLFDNFPNRDVIS-----WSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNG 121

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           F+   +L     +   G   Q+HG  ++ GF  D  +    I  Y  CG + D +RVFDE
Sbjct: 122 FSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDE 181

Query: 199 MS--ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI-KPNSVTMVCVISACAKLQNL 255
            S    +++ W S+I A        E + LF +MV  G+  P  +T   V++AC      
Sbjct: 182 TSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEE 241

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           + G  V   I + G++A  L  N+LV  Y KCG +  A QLF     +++V  N +++  
Sbjct: 242 KYGAMVHGRIIKAGLEATNLW-NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAAN 300

Query: 316 VRLGLAREALAILDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            + G    AL +   ML   P  +P+RVT LS +SA + L  L CGR  H ++ R  LE 
Sbjct: 301 EQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEV 360

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
             SI N++I  Y KC +   A  IF+ +  + ++SWNS++AG  +N           E  
Sbjct: 361 DTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQN-----------EQQ 409

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY----LGALD 489
           GR                      ++F+ M+   I+ D  ++  + +A       L    
Sbjct: 410 GR--------------------CFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFR 449

Query: 490 LAKWIYAYIEKN----GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
             K I+ YI +     G+   + ++ A++ M+A+      A ++F+ M+ RD  +W A +
Sbjct: 450 RGKEIHGYILRRITPGGV--SLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMM 507

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN----QGWH-----LF 596
              +     E  + +F ++L+QG   D +    +LT+C  G LV+    + +H     LF
Sbjct: 508 DGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSC--GRLVSLQLGKQFHAVVAKLF 565

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKH 654
                 H  S   ++   ++ +  + G + +A  +   M  E  DV  W +++  C  H
Sbjct: 566 NGQDCPHQDSLLSIN-NALISMYSKCGSIKDAAQVFLKM--ERKDVFSWTAMITGCAHH 621


>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Brachypodium distachyon]
          Length = 585

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/468 (48%), Positives = 312/468 (66%)

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +CN M+  Y+  G+   A ++FD MS + +VSWN++I G    GDV  ARE+F     RD
Sbjct: 118 LCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRD 177

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
             SW++M+    +    +EA+EL+R M    +  D ++MV V SAC  +GAL +   ++ 
Sbjct: 178 AFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHR 237

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           ++E N +  DM+L TALVDM+A+CGD + +++VF  M  +DV  W++ I  +A  G G  
Sbjct: 238 FVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHD 297

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A+ LF+EM+ QG++P+ I F+GVL AC+H GLVN G   F SM+D+HGV P++ HYGCMV
Sbjct: 298 ALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMV 357

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
           DLLGRAG + EA++LI+SM  +P+ +IW +LL AC+ H+NV+IA  A  ++  LDP   G
Sbjct: 358 DLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADG 417

Query: 677 VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
            +VLLSNIYA A  W  VA +R  ++ + I+++PG SSIE    VHEF SGD SHP +  
Sbjct: 418 HYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEE 477

Query: 737 ISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIR 796
           I  ML EM  RLR AGY P  + VL D+DEQ KK  L+ HSEKLA+AFGL+ T     +R
Sbjct: 478 IYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLR 537

Query: 797 VVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + KNLR C DCHS  KL+S  YDR++IVRD NRFH F +G CSC D+W
Sbjct: 538 ITKNLRACEDCHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 183/389 (47%), Gaps = 27/389 (6%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP--DKFTFPFVLNACTKS 151
           ++    +A LF+  +L+  Y+    G  A++     A F   P  D F    +L A    
Sbjct: 74  LRSGFAAADLFVRTALVEMYAKTAAGEIALAR----AAFDEAPRRDVFLCNVMLAAYVAR 129

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
               E  +V   +      RD+   N +I+ Y   GD+   R +FD   +R+  SW+S+I
Sbjct: 130 GEVAEARKVFDGMS----GRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMI 185

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
            A A+    KEA+ L+ EM   G+ P+ ++MV V+SAC+ +  L +G  V  +++   ++
Sbjct: 186 SAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVE 245

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            +  +  ALVDMY KCG ++ + ++F     ++++  ++++      GL  +AL++  EM
Sbjct: 246 VDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEM 305

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRM-------CHGYVLRNGLEGWDSICNTMIDM 384
           +  G +P+ +T +  + A   +G +  G+         HG V R    G       M+D+
Sbjct: 306 ISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYG------CMVDL 359

Query: 385 YMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS---W 440
             + G  E A  +   M+ K   + W +L+     + +VE A E  +++   D ++   +
Sbjct: 360 LGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHY 419

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIK 469
             +     Q N +E   E+ + +  E I+
Sbjct: 420 VLLSNIYAQANSWEGVAEMRKTIRRENIQ 448


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/707 (36%), Positives = 411/707 (58%), Gaps = 39/707 (5%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           +L + T S +  + +Q+H  +   G   R+ ++   L   Y  CG +   + +FD++  +
Sbjct: 28  LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N   W S+I   A  + P  A++L+ +M+  G KP++ T   V+ AC  L   E+G +V 
Sbjct: 88  NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVH 147

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           A +   G++ +  + N+++ MY K G V+ A+ +F     R+L   NT+MS +V+ G AR
Sbjct: 148 ALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEAR 207

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN--- 379
            A  +  +M   G   DR T+L+ +SA   + DL  G+  HGYV+RNG  G   +CN   
Sbjct: 208 GAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESG--RVCNGFL 265

Query: 380 --TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
             ++IDMY  C  + ++C                             AR++F  +  +D 
Sbjct: 266 MNSIIDMYCNC--ESVSC-----------------------------ARKLFEGLRVKDV 294

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           +SWN+++ G  +     +A+ELF  M+      D VT++ V +AC  + AL L   + +Y
Sbjct: 295 VSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSY 354

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           + K G   ++ + TAL+ M+A CG    A +VF  M ++++ A T  +    + G G +A
Sbjct: 355 VVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREA 414

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           + +F EML +G+ PD  +F  VL+ACSH GLV++G  +F  MT  + V P+  HY C+VD
Sbjct: 415 ISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVD 474

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGRAG L EA  +I++M ++PN+ +W +LL+AC+ H+NV +A  +A+++ EL+P+    
Sbjct: 475 LLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSG 534

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +V LSNIYA+  +W +V  VR  + ++ +RK P  S +E+N  VH+F  GD SH + ++I
Sbjct: 535 YVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDI 594

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
            + L+++N +L+ AGY PD + VL DV+E+ K+ +L  HSE+LA+AF LI+T     IR+
Sbjct: 595 YAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRI 654

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KNLR+C DCH+  K++SK+ +REII+RD  RFH FR G CSC  +W
Sbjct: 655 TKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 156/558 (27%), Positives = 263/558 (47%), Gaps = 49/558 (8%)

Query: 26  AKTTPKDSPSIG----SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFE 81
           + T+  DS   G    SL N K+L +  Q H H+   G   + +Y++  +  C       
Sbjct: 15  SSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAAC--YAVCG 72

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
            + YAQ  FD  +  N      F++NS+IRGY+C      A+ LY+++  FG  PD FT+
Sbjct: 73  HMPYAQHIFDQIVLKNS-----FLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTY 127

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
           PFVL AC        G +VH  +V  G + DV+V N +++ Y + GD+   R VFD M  
Sbjct: 128 PFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLV 187

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R++ SW +++    +    + A  +F +M  +G   +  T++ ++SAC  + +L++G  +
Sbjct: 188 RDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEI 247

Query: 262 CAYI---DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             Y+    E G   N  ++N+++DMY  C +V  A++LF   + +++V  N+++S Y + 
Sbjct: 248 HGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKC 307

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G A +AL +   M++ G  PD VT++S ++A  Q+  L  G     YV++ G      + 
Sbjct: 308 GDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVG 367

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
             +I MY  CG    ACR+FD                               EMP ++  
Sbjct: 368 TALIGMYANCGSLVCACRVFD-------------------------------EMPEKNLP 396

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +   M+ G        EA+ +F  ML + +  D      V SAC + G +D  K I+  +
Sbjct: 397 ACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKM 456

Query: 499 EKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQ 556
            ++  +       + LVD+  R G    A  V   M+ K +   WTA + A  +  N + 
Sbjct: 457 TRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKL 516

Query: 557 AVELFNEMLRQGIKPDSI 574
           AV    ++    + PD +
Sbjct: 517 AVISAQKLFE--LNPDGV 532


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/626 (39%), Positives = 369/626 (58%), Gaps = 40/626 (6%)

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           +L  ++C  ID   + +N  +   L+  Y  CG   + + +F E   +N+V  N ++ +Y
Sbjct: 56  KLHSKIC--IDH-DLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSY 112

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           V   L  +AL +   M  HG  PD  T    + AS+   DL  G   H  V+R GL+   
Sbjct: 113 VNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNV 172

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA---------- 425
            + N +I MY KCG    ACR+ D M  + VVSWNSL+AG  +NG  + A          
Sbjct: 173 FVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELL 232

Query: 426 ---------------------------REVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                      +E+F ++  +  +SWN M+      +M  EA++
Sbjct: 233 GLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVD 292

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           +F  M    +  D +++  V  ACG L AL L + I+ Y+ +  +  ++ L  AL+DM+A
Sbjct: 293 IFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYA 352

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG  + A +VF +M+ RDV +WT+ I A  M G G  AV LF+ M   G+ PDSI FV 
Sbjct: 353 KCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVS 412

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL+ACSH GL+++G + F+ MT+   + P+I H+ CMVDLLGRAG + EA   IK MP+E
Sbjct: 413 VLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPME 472

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           PN+ +WG+LL+AC+ + N+ I   AA+++ +L PE+SG +VLLSNIYA AG+W +V  VR
Sbjct: 473 PNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVR 532

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
             MK +GI+K+PG S+ E++ +VH F +GD+SHP+   I   L     ++++AGYVP+  
Sbjct: 533 SIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETD 592

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
           + L DV+E++K+  L+ HSEKLA+AF +++T+   PIR+ KNLR+C DCH  AKL+SK+ 
Sbjct: 593 SALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIV 652

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            REI +RD NRFH F  G CSC D+W
Sbjct: 653 GREITIRDTNRFHHFYNGVCSCGDYW 678



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 217/463 (46%), Gaps = 66/463 (14%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           +I D      +  +N +IR Y    L  +A+ ++  +AG GI PD +T+P VL A + S 
Sbjct: 92  HIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSE 151

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G+Q+H A+V++G D +VFV N LI+ YG+CG +V+  RV D+M  R+VVSW SL+ 
Sbjct: 152 DLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVA 211

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
            CAR     +A+ +  EM   G+KP++ TM  ++ A                        
Sbjct: 212 GCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA------------------------ 247

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
              + N  +D       V   K++F +  +++LV  N +++ Y+   +  EA+ I  +M 
Sbjct: 248 ---VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME 298

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
            H   PD +++ S + A   L  LL GR  H YV+R  L+    + N +IDMY KCG  E
Sbjct: 299 DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 358

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +FD M  + VVSW S+I+    NG             GRD +S             
Sbjct: 359 YAREVFDQMKFRDVVSWTSMISAYGMNGK------------GRDAVS------------- 393

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLAT 511
                 LF  M    +  D +  V V SAC + G LD  ++ +  + E+  I   ++   
Sbjct: 394 ------LFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV 447

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            +VD+  R G    A    ++M  + +   W A + A  +  N
Sbjct: 448 CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 490


>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/583 (41%), Positives = 353/583 (60%), Gaps = 11/583 (1%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G+  + ++   L   Y   G +  +  LF    + N+ L   I++ +    L   AL+  
Sbjct: 50  GLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYY 109

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +ML H  +P+  T+ S + A      L   R  H + ++ GL     +   ++D Y + 
Sbjct: 110 SQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARG 165

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G    A ++FD M  +++VS+ +++    K+G +  AR +F  M  +D + WN M+ G  
Sbjct: 166 GDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYA 225

Query: 449 QENMFEEAMELFR-------VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           Q     EA+  FR          + +++ + +T+V V S+CG +GAL+  KW+++Y+E N
Sbjct: 226 QHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENN 285

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           GI  ++++ TALVDM+ +CG  + A +VF  ME +DV AW + I    + G  ++A++LF
Sbjct: 286 GIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLF 345

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           +EM   G+KP  I FV VLTAC+H GLV++GW +F SM D +G+ P++ HYGCMV+LLGR
Sbjct: 346 HEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGR 405

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG + EA DL++SM VEP+ V+WG+LL AC+ H NV +    AE +       SG +VLL
Sbjct: 406 AGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLL 465

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SN+YA+A  W  VA+VR  MK  G+ K PG SSIEV  +VHEF +GD  HP   +I SML
Sbjct: 466 SNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSML 525

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
            +MN  L++  Y P    VL D+ EQEK+  L  HSEKLA+AFGLISTS    I++VKNL
Sbjct: 526 EKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGAAIKIVKNL 585

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH+  K++SK+  R+II+RD NRFH F  GSCSC D+W
Sbjct: 586 RVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 204/447 (45%), Gaps = 63/447 (14%)

Query: 28  TTPKDSPSIGSL-KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFE-SLTY 85
             P D  ++  L  N K+ + L Q H  +L++GL H P    K+  + A +G    S+T 
Sbjct: 18  AAPVDKDNLALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTL 77

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
             +           +  +F++  +I  ++   L   A+S Y ++    I P+ FT   +L
Sbjct: 78  FHRT---------PNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLL 128

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            ACT   A      VH   +K G    ++V   L++ Y   GD+   +++FD M ER++V
Sbjct: 129 KACTLHPARA----VHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLV 184

Query: 206 SWTSLICACARRDLPKEAVYLFFEM---------------VEEG---------------- 234
           S+T+++   A+  +  EA  LF  M                + G                
Sbjct: 185 SYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMM 244

Query: 235 -------IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
                  ++PN +T+V V+S+C ++  LE G  V +Y++  G+K N  +  ALVDMY KC
Sbjct: 245 GGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKC 304

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G+++ A+++F   + +++V  N+++  Y   G + EAL +  EM   G +P  +T ++ +
Sbjct: 305 GSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVL 364

Query: 348 SASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           +A A  G +  G      M  GY +   +E +      M+++  + G+ + A  +   M 
Sbjct: 365 TACAHAGLVSKGWEVFDSMKDGYGMEPKVEHY----GCMVNLLGRAGRMQEAYDLVRSME 420

Query: 403 -NKTVVSWNSLIAGLIKNGDVESAREV 428
                V W +L+     + +V    E+
Sbjct: 421 VEPDPVLWGTLLWACRIHSNVSLGEEI 447



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 6/161 (3%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+A + + G+H    L   L   +A  G    ++ +F R    +V  WT  I A A    
Sbjct: 42  IHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDL 101

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
              A+  +++ML   I+P++     +L AC+         H  +      G+S  +    
Sbjct: 102 FHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARAVHSHAIK-----FGLSSHLYVST 156

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            +VD   R G +  A  L  +MP E + V + ++L    KH
Sbjct: 157 GLVDAYARGGDVASAQKLFDAMP-ERSLVSYTAMLTCYAKH 196


>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/611 (39%), Positives = 367/611 (60%), Gaps = 4/611 (0%)

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEM 199
           PF L+   K  +  +  Q+   +V  G   D F  + LI F    E  D+     +    
Sbjct: 8   PF-LSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNT 66

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELG 258
              N  SW   I      + P+EAV L+  +++ +G KP++ T   +  ACA+L  + +G
Sbjct: 67  RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 126

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             +  ++  LG  ++  + NA++ + + CG +D A+++F +   R+LV  N++++ YVR 
Sbjct: 127 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 186

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G A EAL    EM + G +PD VTM+  VS+ AQL DL  GR  H Y+  NGL+    + 
Sbjct: 187 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 246

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N ++DMYMKCG  E A ++FD M+NKT+VSW +++ G  ++G ++ A ++F EMP +D +
Sbjct: 247 NALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVV 306

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
            WN M+GG    N  +EA+ LF  M +  I  D VTMV   SAC  LGALD+  WI+ YI
Sbjct: 307 PWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYI 366

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
           EK+ +  ++ L TAL+DM+A+CG   +A+QVF+ +  R+   WTA I  +A+ GN   A+
Sbjct: 367 EKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAI 426

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
             F+EM+   + PD + F+G+L+AC HGGLV +G   F  M+    +SP++ HY CMVDL
Sbjct: 427 AYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDL 486

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAGLL EA +LIKSMP+E + V+WG+L  AC+ H NV +   AA ++ ++DP  SG++
Sbjct: 487 LGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIY 546

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLL+N+Y  A  W    + R  M+++G+ K PG SSIEVNG V+EF   D+SHP+   I 
Sbjct: 547 VLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIY 606

Query: 739 SMLREMNCRLR 749
             L ++  +L 
Sbjct: 607 ECLIQLTRQLE 617



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 169/569 (29%), Positives = 278/569 (48%), Gaps = 74/569 (13%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           +P +  L+ CK++++LKQ    ++  GL       S+++  CA +  +  L Y       
Sbjct: 7   NPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCA-ISEWRDLDYCTN---- 61

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKS 151
            I  N  +   F +N  IRG+       EA+ LY   L   G  PD +T+P +  AC + 
Sbjct: 62  -ILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARL 120

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
           S    G ++ G ++ +GFD D+FV N +I+    CGD+   R++FD+   R++VSW S+I
Sbjct: 121 SLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMI 180

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
               RR    EA+  + EM  EGIKP+ VTM+ V+S+CA+L++L+LG     YI+E G+K
Sbjct: 181 NGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLK 240

Query: 272 ANALMVNALVDMYMKCGAVDTAK-------------------------------QLFGEC 300
               + NAL+DMYMKCG +++A+                               +LF E 
Sbjct: 241 LTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEM 300

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            D+++V  N ++  YV     +EALA+ +EM      PD VTM+S +SA +QLG L  G 
Sbjct: 301 PDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGI 360

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H Y+ ++ L    ++   +IDMY KCGK   A ++F  +  +  ++W ++I+GL  +G
Sbjct: 361 WIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHG 420

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
           +   A   FSE                               M+   +  D VT +G+ S
Sbjct: 421 NAHGAIAYFSE-------------------------------MIDNSVMPDEVTFLGLLS 449

Query: 481 ACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDV 538
           AC + G ++  +  ++ +  K  +   ++  + +VD+  R G  + A ++ + M  + D 
Sbjct: 450 ACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADA 509

Query: 539 SAWTAAIGAMAMEGN---GEQAVELFNEM 564
             W A   A  + GN   GE+A     +M
Sbjct: 510 VVWGALFFACRIHGNVLMGERAASKLLQM 538


>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Vitis vinifera]
          Length = 615

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/507 (45%), Positives = 329/507 (64%)

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD  T    V  SAQL     G   HG  ++ G E    + + +I MY + G  +   R+
Sbjct: 109 PDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRV 168

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F  +    +V   ++++   K GDV  AR++F +M  +D I+WN M+ G  Q     EA+
Sbjct: 169 FSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREAL 228

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF +M  E +KV+ V+MV V SAC +LGALD  +W +AYIE+N +   + L TAL+DM+
Sbjct: 229 SLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMY 288

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG+  +AM+VF  M++++V  W++AIG +AM G GE+ +ELF+ M +  ++P+ I FV
Sbjct: 289 AKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFV 348

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL  CS  GLV +G   F SM+ ++G+ P++ HYGCMVDL GRAG L EAL+ I SMPV
Sbjct: 349 SVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPV 408

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
            P+   WG+LL AC+ ++N+++   A+ +I EL+ +  G +VLLSNIYA +  W  V+ V
Sbjct: 409 RPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNV 468

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  M  +G+RK PG S IEV G+VHEF  GD+SHP    I  ML E++ RL+ +GYV + 
Sbjct: 469 RQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANT 528

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
             V  D++E+EK+  L  HSEK+A+AFGLIS S  +PIR+VKNLR+C DCH   K++SK 
Sbjct: 529 NPVFFDIEEEEKEDALCMHSEKIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKA 588

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++REI+VRD NRFH FR G CSC  +W
Sbjct: 589 FNREIVVRDRNRFHHFRDGECSCKGYW 615



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 225/527 (42%), Gaps = 113/527 (21%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P+I  ++ C TL ELKQ H  +L  GL + P  + + V + A +    +L Y+ +  D  
Sbjct: 11  PTISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIA-LNNPNNLHYSNQVLD-- 67

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL---AGFGILPDKFTFPFVLNACTK 150
              N  + TLF +NS+IR +S       +   Y  +   AG+ + PD +TF F++    +
Sbjct: 68  ---NSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGY-LAPDNYTFTFLVRTSAQ 123

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
             A G G  VHGA VK GF+ D  V++ LI  Y E G +    RVF            S 
Sbjct: 124 LLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVF------------SS 171

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           IC                       +P+ V    ++SACAK+                  
Sbjct: 172 IC-----------------------EPDLVCQTAMVSACAKM------------------ 190

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
                            G V  A++LF +   ++ +  N ++S YV+ G +REAL++ + 
Sbjct: 191 -----------------GDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNL 233

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M   G + + V+M+S +SA + LG L  GR  H Y+ RN L    ++   +IDMY KCG 
Sbjct: 234 MQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGN 293

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  +F  M  K V +W+S I GL  NG                              
Sbjct: 294 MNKAMEVFWGMKEKNVYTWSSAIGGLAMNG------------------------------ 323

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQL 509
              E+ +ELF +M  + ++ + +T V V   C  +G ++  +  +  + K  GI   ++ 
Sbjct: 324 -AGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEH 382

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAMAMEGNGE 555
              +VD++ R G    A+     M  R  V AW A + A  +  N E
Sbjct: 383 YGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNME 429


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 276/829 (33%), Positives = 441/829 (53%), Gaps = 49/829 (5%)

Query: 25  KAKTTPKDSP---SIGS-LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQM 77
           +A   P  +P   ++ S LK C    + +   + H   +K GL       + ++   A+ 
Sbjct: 153 RASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKC 212

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
           G  +S   A + F++  +D    A+   +NS++ G    G  +EA++L+  +   G   +
Sbjct: 213 GLLDS---ALRVFEWLQQDARDVAS---WNSVVSGCVQNGRTLEALALFRGMQSAGFPMN 266

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
            +T   VL  C +      G ++H A++K G + ++   N L+  Y + G +    RVF 
Sbjct: 267 SYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFG 325

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
           +++E++ +SW S++    +     EA+  F EM++ G +P+   +V + SA   L  L  
Sbjct: 326 QIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNN 385

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G    AY  +  +  +  + N L+DMY+KCG+++ + ++F     R+ +   TI++ + +
Sbjct: 386 GREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQ 445

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
                EAL ++ E+   G   D + + S +     L  +   +  H Y +RNGL   D I
Sbjct: 446 SSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL--LDLI 503

Query: 378 C-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
             N +ID+Y +CG+       FDH  N                        +F  +  +D
Sbjct: 504 LENRLIDIYGECGE-------FDHSLN------------------------LFQRVEKKD 532

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            +SW +M+   T       A+ LF  M    I+ D V +V +  A   L +L   K ++ 
Sbjct: 533 IVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHG 592

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           ++ +     +  + ++LVDM++ CG    A++VF R + +DV  WTA I A  M G+G+Q
Sbjct: 593 FLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQ 652

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A++LF  ML+ G+ PD + F+ +L ACSH  LV +G H    M   + + P   HY C+V
Sbjct: 653 AIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVV 712

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
           D+LGR+G   EA + IK+MP++P   +W +LL AC+ H+N  +A  AA ++ EL+P+  G
Sbjct: 713 DILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPG 772

Query: 677 VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
            ++L+SN++A  GKW N    R +M E+G+RK P  S IE+   +H FTSGD  H +   
Sbjct: 773 NYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEA 832

Query: 737 ISSMLREMNCRL-RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
           I   L E+   L R+ GYV D   VL D  E+EK  +L  HSE++A+AFGLIST   MPI
Sbjct: 833 IHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPI 892

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+ KNLR+C DCH F KLVSK+++R+I+VRD NRFH F  GSCSC DFW
Sbjct: 893 RIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 266/568 (46%), Gaps = 56/568 (9%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF---DRDVFVENCLINFYGECGDIVDG 192
           P +  + +VL+      A  EG QVH   V  G    D D F+   L+  YG CG + D 
Sbjct: 55  PAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDA 114

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM---VEEGIKPNSVTMVCVISAC 249
           RR+F+ M  R V SW +L+ A        EA+ ++  M      G  P+  T+  V+ AC
Sbjct: 115 RRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKAC 174

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVL 307
               +   G  V     ++G+  + L+ NAL+ MY KCG +D+A ++F   +   R++  
Sbjct: 175 GAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVAS 234

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N+++S  V+ G   EALA+   M   G   +  T ++ +   A+LG L  GR  H  +L
Sbjct: 235 WNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALL 294

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           + G E  +  CN ++ MY K G+ + A R+F  ++ K  +SWNS+++  ++N        
Sbjct: 295 KCGSE-LNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQN-------- 345

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                                  + + EA++ F  ML    + D   +V ++SA G+L  
Sbjct: 346 -----------------------SFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSR 382

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L+  +  +AY  K  +H D+Q+   L+DM+ +CG  + + +VF  M  RD  +WT  +  
Sbjct: 383 LNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILAC 442

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            A      +A+E+  E+ ++GI  DS++   +L  C        G      +  +H  + 
Sbjct: 443 FAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCC-------GLKSISLLKQVHCYAI 495

Query: 608 Q-----IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAA 661
           +     ++    ++D+ G  G    +L+L +   VE  D++ W S++  C  +  ++ A 
Sbjct: 496 RNGLLDLILENRLIDIYGECGEFDHSLNLFQR--VEKKDIVSWTSMINCCTNNGRLNGAV 553

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAG 689
           +    + + + +   V  L+S + A AG
Sbjct: 554 FLFTEMQKANIQPDSV-ALVSILVAIAG 580


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 283/799 (35%), Positives = 424/799 (53%), Gaps = 45/799 (5%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K  HCHILK+G        + ++    Q     SL  A K FD   + N  S     + +
Sbjct: 55  KHLHCHILKRGTSLDLFAQNILLNFYVQSN---SLQDASKLFDEMPQTNTIS-----FVT 106

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           L +GYS      +A+   + +   G   + F F  +L              +H  + K+G
Sbjct: 107 LAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLG 166

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
              D FV   LI+ Y   G++   R VFD++  +++VSWT ++   A     +E++ LF 
Sbjct: 167 HHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFN 226

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRV--CAYIDELGMKANALMVN-ALVDMYM 285
           +M   G KPN+ T+   + +C  L+   +G  V  CA     G   + L V  AL+++Y 
Sbjct: 227 QMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCAL---KGCYDHDLFVGIALLELYA 283

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G +  A++LF E    +L+  + +++ Y +   ++EAL +   M      P+  T  S
Sbjct: 284 KSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFAS 343

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A A    L  G+  H  VL+ GL     + N ++D+Y KCG                
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCG---------------- 387

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                          ++E++ ++F E+P R+ ++WNT++ G  Q    E AM LF  ML 
Sbjct: 388 ---------------EIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLE 432

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             ++   VT   V  A   L AL+    I++   K   + D  +A +L+DM+A+CG    
Sbjct: 433 HDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRIND 492

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A   F +M KRD  +W A I   +M G   +A+ LF+ M     KP+ + FVGVL+ACS+
Sbjct: 493 ARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSN 552

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GL+ +G   F SM+  + + P I HY CMV LLGR G   EA+ LI  +  +P+ ++W 
Sbjct: 553 AGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWR 612

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC  H+ VD+    A+ + E++P     HVLLSN+YA+AG+W NVA VR  M+++ 
Sbjct: 613 ALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKK 672

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           +RK PG S +E  G VH F+ GD SHP++  I +ML  +N + RDAGYVPD   VLLDV 
Sbjct: 673 VRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQ 732

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           + EK+  L  HSE+LA+A+GLI T  +  IR++KNLR+C DCH+  KL+SKV  REI++R
Sbjct: 733 DDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIR 792

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH FR G CSC D+W
Sbjct: 793 DINRFHHFRHGVCSCGDYW 811


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/823 (33%), Positives = 434/823 (52%), Gaps = 71/823 (8%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISKVV-------CTCAQMGTFESLTYAQK 88
           LK C  L +L Q    H  I++ GL  K    + ++       C  + M  FE +     
Sbjct: 135 LKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMERDLV 194

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC 148
           +++  I  N  S  L +                A+ L+  +   G+ P + T    L  C
Sbjct: 195 SWNAAIAANAQSGDLGI----------------ALELFQRMQLEGVRPARITLVIALTVC 238

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
              +   +   +H  + + G ++ + V   L + Y   G +   + VFD  +ER+VVSW 
Sbjct: 239 ---ATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWN 295

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           +++ A A+     EA  LF  M+ EGI P+ VT+V   + C+ L+    G  +     E 
Sbjct: 296 AMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLR---FGRMIHGCALEK 352

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGE--CKDRNLVLCNTIMSNYVRLGLAREALA 326
           G+  + ++ NAL+DMY +CG+ + A+ LF    C   N V  NT+++   + G  + A+ 
Sbjct: 353 GLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC---NAVSWNTMIAGSSQKGQMKRAVE 409

Query: 327 ILDEMLLHGPRPDRVT---MLSAVSASAQLGDLLC-GRMCHGYVLRNGLEGWDSICNTMI 382
           +   M L G  P R T   +L AV+++ +    +  GR  H  ++  G     +I   ++
Sbjct: 410 LFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVV 469

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY  CG  + A   F                   + G +E   +V         +SWN 
Sbjct: 470 KMYASCGAIDEAAASF-------------------QRGAMEDRHDV---------VSWNA 501

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           ++  L+Q    + A+  FR M    +  +++T V V  AC    AL   + ++ ++  +G
Sbjct: 502 IISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSG 561

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELF 561
           +  ++ +ATAL  M+ RCG  + A ++F ++  +RDV  + A I A +  G   +A++LF
Sbjct: 562 MESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLF 621

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
             M ++G +PD   FV VL+ACSHGGL ++GW +FRSM   +G++P   HY C VD+LGR
Sbjct: 622 WRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGR 681

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG L +A +LI+ M V+P  ++W +LL AC+K+++VD    A   + ELDP     +V+L
Sbjct: 682 AGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVL 741

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNI A AGKW   A VR +M+ +G+RK  G S IE+  +VHEF +GD SHP    I   L
Sbjct: 742 SNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYREL 801

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
             ++  +R+ GYVPD   VL  VDE EK+ LL  HSE+LA+A G++S+S T  +RV+KNL
Sbjct: 802 ERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS-TDTVRVMKNL 860

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH+  K +SK+ ++EI+VRD +RFH F  GSCSC D+W
Sbjct: 861 RVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 166/617 (26%), Positives = 286/617 (46%), Gaps = 61/617 (9%)

Query: 43  KTLNELKQPHCHILKQGLGHK-PSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           + L++ ++ H  I+  GL  +  +++ ++   C  +G  E +      F      +E S 
Sbjct: 43  RLLSQGRRIHARIVSLGLEEELGNHLLRLYLKCESLGDVEEV------FSRLEVRDEAS- 95

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               + ++I  Y+  G    AI ++  +   G+  D  TF  VL AC +     +G  +H
Sbjct: 96  ----WTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH 151

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             IV+ G      + N L++ YG CG +     +F++M ER++VSW + I A A+     
Sbjct: 152 AWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLG 210

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            A+ LF  M  EG++P  +T+V  ++ CA ++  +    +   + E G++   ++  AL 
Sbjct: 211 IALELFQRMQLEGVRPARITLVIALTVCATIRQAQA---IHFIVRESGLEQTLVVSTALA 267

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
             Y + G +  AK++F    +R++V  N ++  Y + G   EA  +   ML  G  P +V
Sbjct: 268 SAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKV 327

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+   V+AS     L  GRM HG  L  GL+    + N ++DMY +CG  E A  +F  +
Sbjct: 328 TL---VNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI 384

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL-----TQENMFEEA 456
                VSWN++IAG  + G ++ A E+F  M           L G+     T  N+ E  
Sbjct: 385 PC-NAVSWNTMIAGSSQKGQMKRAVELFQRM----------QLEGMAPVRATYLNLLE-- 431

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
                                VAS      A+   + +++ I   G   +  + TA+V M
Sbjct: 432 --------------------AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKM 471

Query: 517 FARCGDPQRAMQVFRR--MEKR-DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +A CG    A   F+R  ME R DV +W A I +++  G+G++A+  F  M   G+ P+ 
Sbjct: 472 YASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQ 531

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I  V VL AC+    + +G  +        G+   +     +  + GR G L  A ++ +
Sbjct: 532 ITCVAVLDACAGAAALTEG-EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFE 590

Query: 634 SMPVEPNDVIWGSLLAA 650
            + VE + VI+ +++AA
Sbjct: 591 KVAVERDVVIFNAMIAA 607



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 241/522 (46%), Gaps = 58/522 (11%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L A        +G ++H  IV +G + ++   N L+  Y +C  + D   VF  +  R+
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
             SWT++I A       K A+ +F  M +EG++ ++VT + V+ ACA+L +L  G  + A
Sbjct: 93  EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           +I E G+K  +++ N L+ +Y  CG V +A  LF E  +R+LV  N  ++   + G    
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLF-EKMERDLVSWNAAIAANAQSGDLGI 211

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +   M L G RP R+T++ A++  A +      +  H  V  +GLE    +   +  
Sbjct: 212 ALELFQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVRESGLEQTLVVSTALAS 268

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
            Y + G    A  +FD  + + VVSWN+                               M
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNA-------------------------------M 297

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           LG   Q     EA  LF  ML E I   +VT+V  ++ C    +L   + I+    + G+
Sbjct: 298 LGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC---SSLRFGRMIHGCALEKGL 354

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D+ L  AL+DM+ RCG P+ A  +F+R+    VS W   I   + +G  ++AVELF  
Sbjct: 355 DRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNAVS-WNTMIAGSSQKGQMKRAVELFQR 413

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG---------C 614
           M  +G+ P    ++ +L A      V       R+M +   +  +IV  G          
Sbjct: 414 MQLEGMAPVRATYLNLLEA------VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTA 467

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEP-NDVI-WGSLLAACQKH 654
           +V +    G + EA    +   +E  +DV+ W +++++  +H
Sbjct: 468 VVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQH 509


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/761 (34%), Positives = 417/761 (54%), Gaps = 34/761 (4%)

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
           Y + A D +  +N      F++N +IRG+   GL  +A+  Y  +   G+  D FT+PFV
Sbjct: 75  YMKNALDLF--ENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFV 132

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           + AC       EG +VHG ++K G D D+++ N LI  Y + G I     VF EM  R++
Sbjct: 133 IKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDL 192

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           VSW S+I           ++  F EM   GIK +  +++ ++ AC+    L  G  +   
Sbjct: 193 VSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQ 252

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           +    ++ + ++  +LVDMY KCG +D A++LF +  D+++V  N ++  Y     + E+
Sbjct: 253 MMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFES 312

Query: 325 LAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            A + +M   G   PD +TM++ +   AQL  +L G+  HG+ +RNG      +   ++D
Sbjct: 313 FAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVD 372

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY +CGK                               ++ A  +F +M  R+ ISWN M
Sbjct: 373 MYGECGK-------------------------------LKPAECLFGQMNERNLISWNAM 401

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           +   T+     +AM LF+ + ++ +K D  T+  +  A   L +L  A+ I+ Y+ K  +
Sbjct: 402 IASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKL 461

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             +  ++ ++V M+ +CG+  RA ++F RM  +DV +W   I A A+ G G  ++ELF+E
Sbjct: 462 DSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSE 521

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M  +G +P+   FV +L +CS  GLVN+GW  F SM   + ++P I HYGC++DL+GR G
Sbjct: 522 MREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTG 581

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L  A + I+ MP+ P   IWGSLL A +   +V++A  AAE I  L+ + +G +VLLSN
Sbjct: 582 NLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSN 641

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           +YA AG+W +V R++  MK++G+ K  G S ++++ K   F + D S  E+N +  +L  
Sbjct: 642 MYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDI 701

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           ++ ++ +  YV  LT       E+++      HS +LA+ FGLIST+   P+ V KN+R+
Sbjct: 702 ISKKIGEDVYVHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRI 761

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C  CH FAK +S+   REIIVRD+  FH F  G CSC D+W
Sbjct: 762 CEACHRFAKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 241/504 (47%), Gaps = 37/504 (7%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y E G + +   +F+ M + +   W  +I       L  +AV  +  M   G++ ++ T 
Sbjct: 70  YVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTY 129

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
             VI AC  L +L  G+RV   + + G+  +  + N+L+ MY K G +++A+ +F E   
Sbjct: 130 PFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPV 189

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R+LV  N+++S YV +G    +L+   EM   G + DR +++  + A +  G L  G+  
Sbjct: 190 RDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEI 249

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H  ++R+ LE    +  +++DMY KCG+ + A R+FD +++K++V+WN++I G   N   
Sbjct: 250 HCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNA-- 307

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                                         FE    + ++    ++  D +TM+ +   C
Sbjct: 308 ----------------------------QSFESFAYVRKMQEGGKLHPDWITMINLLPPC 339

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             L A+ L K ++ +  +NG    + L TALVDM+  CG  + A  +F +M +R++ +W 
Sbjct: 340 AQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWN 399

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           A I +    G   +A+ LF ++  + +KPD+     +L A +    + +   +   +T +
Sbjct: 400 AMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKL 459

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKH--QNVDI 659
              S   V    +V + G+ G L  A ++   M  +  DVI W +++ A   H    + I
Sbjct: 460 KLDSNTFVS-NSIVFMYGKCGNLLRAREIFDRMTFK--DVISWNTVIMAYAIHGFGRISI 516

Query: 660 AAYAAERITELDPEKSG-VHVLLS 682
             ++  R    +P  S  V +LLS
Sbjct: 517 ELFSEMREKGFEPNGSTFVSLLLS 540



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 230/494 (46%), Gaps = 30/494 (6%)

Query: 36  IGSLKNCKT---LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           IG L  C     L   K+ HC +++  L       + +V   A+ G    + YA++ FD 
Sbjct: 231 IGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCG---RMDYAERLFDQ 287

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKS 151
                 T  ++  +N++I GYS      E+ +   ++   G L PD  T   +L  C + 
Sbjct: 288 I-----TDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQL 342

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
            A   G  VHG  ++ GF   + +E  L++ YGECG +     +F +M+ERN++SW ++I
Sbjct: 343 EAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMI 402

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
            +  +    ++A+ LF ++  + +KP++ T+  ++ A A+L +L   +++  Y+ +L + 
Sbjct: 403 ASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLD 462

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           +N  + N++V MY KCG +  A+++F     ++++  NT++  Y   G  R ++ +  EM
Sbjct: 463 SNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEM 522

Query: 332 LLHGPRPDRVTMLS-----AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
              G  P+  T +S     +V+     G      M   Y +  G+E +  I    +D+  
Sbjct: 523 REKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCI----LDLIG 578

Query: 387 KCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
           + G  + A    + M    T   W SL+      GDVE A      +   +H +      
Sbjct: 579 RTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCY-- 636

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
            +   NM+ EA     V   ERIK   +   G+  + G    +DL+   + ++ ++    
Sbjct: 637 -VLLSNMYAEAGRWEDV---ERIKF-HMKKEGLEKSVG-CSVVDLSSKTFRFVNQDRSDN 690

Query: 506 DMQLATALVDMFAR 519
           ++ +   ++D+ ++
Sbjct: 691 EINMVYDVLDIISK 704



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 178/388 (45%), Gaps = 38/388 (9%)

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           ++ N++ +   +  Y++ G +  A  LF   +  +  + N ++  +V  GL  +A+    
Sbjct: 56  VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            M   G R D  T    + A   L DL  G   HG V+++GL+    I N++I MY K G
Sbjct: 116 RMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIG 175

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             E A  +F  M  + +VSWNS+I+G +  GD                  W         
Sbjct: 176 CIESAEMVFREMPVRDLVSWNSMISGYVSVGD-----------------GW--------- 209

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
                 ++  FR M +  IK+DR +++G+  AC   G L   K I+  + ++ +  D+ +
Sbjct: 210 -----RSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMV 264

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG- 568
            T+LVDM+A+CG    A ++F ++  + + AW A IG  ++     ++     +M   G 
Sbjct: 265 QTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGK 324

Query: 569 IKPDSIVFVGVLTACSH--GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           + PD I  + +L  C+     L+ +  H F      +G  P +V    +VD+ G  G L 
Sbjct: 325 LHPDWITMINLLPPCAQLEAILLGKSVHGFAIR---NGFLPHLVLETALVDMYGECGKLK 381

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKH 654
            A  L   M  E N + W +++A+  K+
Sbjct: 382 PAECLFGQMN-ERNLISWNAMIASYTKN 408


>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
 gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
          Length = 629

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/565 (43%), Positives = 350/565 (61%), Gaps = 10/565 (1%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGL-------AREALAILDEMLLHG-PRPDRV 341
           +  A++ F +    N    NTI+               + EAL     ML  G   P++ 
Sbjct: 65  IKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKF 124

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T    + A A+L  +  G+  HG+V++ GL   + + + ++ +Y+ CG  + A  +F   
Sbjct: 125 TFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQT 184

Query: 402 S-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
                VV WN +I G ++ GD+ ++RE+F  MP +  +SWN M+ G  Q   F+EA+E+F
Sbjct: 185 RLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMF 244

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
             M    +  + VT+V V  A   LGA++L KW++ + EKN I  D  L +AL+DM+++C
Sbjct: 245 HDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKC 304

Query: 521 GDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           G   +A+QVF  +  K++   W+A IG +AM G    A++ F  M + G+ P  +V++GV
Sbjct: 305 GSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGV 364

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L+ACSH GLV +G  ++  M +I G+ P+I HYGCMVDLLGRAG L EA  LI +MPV+P
Sbjct: 365 LSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKP 424

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
           +DVI  +LL AC+ H N+++    A+ +    P  SG +V LSN++AS G W  V +VRL
Sbjct: 425 DDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRL 484

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
           +MKE  IRK PG S IE++G +HEF   D+SHP    I SML EM+ RLR  GY P+ T 
Sbjct: 485 KMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQ 544

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           VLL++DE+EK+  L +HSEK+A+AFGLIST    P+++VKNLR+C DCHS  KLVSK+Y+
Sbjct: 545 VLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYN 604

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           R+IIVRD  RFH F  GSCSC D+W
Sbjct: 605 RKIIVRDRKRFHHFENGSCSCMDYW 629



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 232/542 (42%), Gaps = 112/542 (20%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
            +  CKT   LKQ H H +K G  H P   ++++     + T   + YA+K F      N
Sbjct: 21  QISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELL-KFLTLSTQREIKYARKFFSQIHHPN 79

Query: 98  ETSATLFMYNSLIRGYSCIGL-------GVEAISLYVELAGFGIL-PDKFTFPFVLNACT 149
                 F +N++IR  +            +EA+  +  +   G++ P+KFTFP VL AC 
Sbjct: 80  -----CFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACA 134

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC----------------------- 186
           K +   EG Q+HG +VK+G   D FV + L+  Y  C                       
Sbjct: 135 KLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWN 194

Query: 187 ---------GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
                    GD+   R +FD M  ++VVSW  +I  CA+    KEA+ +F +M    + P
Sbjct: 195 VMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPP 254

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           N VT+V V+ A ++L  +ELG  V  + ++  ++ + ++ +AL+DMY KCG++D A Q+F
Sbjct: 255 NYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVF 314

Query: 298 -GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
            G    +N +  + I+      G AR+AL     M   G  P  V  +  +SA +  G +
Sbjct: 315 EGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLV 374

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             GR                                    I+ HM N         I GL
Sbjct: 375 EEGR-----------------------------------SIYYHMVN---------IVGL 390

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
                          +P  +H  +  M+  L +    EEA +L   +L+  +K D V + 
Sbjct: 391 ---------------LPRIEH--YGCMVDLLGRAGCLEEAEQL---ILNMPVKPDDVILK 430

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            +  AC   G +++ + I A I       D     AL +MFA  G+ +  ++V  +M++ 
Sbjct: 431 ALLGACKMHGNIEMGERI-AKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKEL 489

Query: 537 DV 538
           D+
Sbjct: 490 DI 491



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 122/276 (44%), Gaps = 45/276 (16%)

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQEN---MFE----EAMELFRVMLSE-RIKVDR 472
           +++ AR+ FS++   +  SWNT++  L   +   +F     EA+  F  ML++  ++ ++
Sbjct: 64  EIKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNK 123

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC------------ 520
            T   V  AC  L  ++  K ++ ++ K G+  D  + + LV ++  C            
Sbjct: 124 FTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQ 183

Query: 521 --------------------GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
                               GD + + ++F  M  + V +W   I   A  G+ ++A+E+
Sbjct: 184 TRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEM 243

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-W-HLFRSMTDIHGVSPQIVHYGCMVDL 618
           F++M    + P+ +  V VL A S  G +  G W HLF    +I       V    ++D+
Sbjct: 244 FHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEI---EIDDVLGSALIDM 300

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             + G + +A+ + + +  + N + W +++     H
Sbjct: 301 YSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMH 336


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/749 (35%), Positives = 409/749 (54%), Gaps = 37/749 (4%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           T    F++N +IRG++   L ++A++ Y  +   G  PD+FTFP VL  C ++ A GEG 
Sbjct: 81  TRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGR 140

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
             H A++K+G   DV+  N L+  Y + G + D  RVFD M  R++VSW +++       
Sbjct: 141 AAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNG 200

Query: 219 LPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           +   A+  F EM +   +  +SV ++  ++AC     L LG  +  Y    G++ +  + 
Sbjct: 201 MGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVG 260

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
            +LVDMY KCG V  A+ +F +   R +V  N ++  Y       +A     +M + G +
Sbjct: 261 TSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQ 320

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            + VT ++ ++A AQ    L GR  H YV+R        +   +++MY K GK E + +I
Sbjct: 321 VEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKI 380

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F  +++KT+VSWN++IA  +                                  M++EA+
Sbjct: 381 FGQITDKTLVSWNNMIAAYM-------------------------------YMEMYQEAI 409

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF  +L++ +  D  TM  V  A   LG++   K +++YI K G      +  A++ M+
Sbjct: 410 ALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMY 469

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           ARCG+   + ++F +M  +DV +W   I   A+ G G+ A+E+F+EM   G++P+   FV
Sbjct: 470 ARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFV 529

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VLTACS  GL  +GW  F SM   +G+ PQI HYGCM DLLGRAG L E L  I++MP+
Sbjct: 530 SVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPI 589

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
            P   IWGSLL A +   ++DIA YAAERI +L+   +G +V+LS++YA AG+W +V R+
Sbjct: 590 APTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERI 649

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  MKE+G+R+    S +E+N K   F +GD SHP+   I      ++   R+ G   D 
Sbjct: 650 RSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILS---RNIGEDLDS 706

Query: 758 TNVLLDVDE--QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           ++ L D D        L + HS +LA+AFGLIS+    P+ V KN+R+C  CH   KL+S
Sbjct: 707 SSNLRDSDPFASSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLIS 766

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K   R+I+V D   +H F  GSC C D+W
Sbjct: 767 KYSGRKIVVGDTKIYHIFSDGSCCCGDYW 795



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 9/390 (2%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
            L E +  H  ++K GLG      + +V   A++G       A++ FD        +  +
Sbjct: 135 ALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGD---AERVFD-----GMPARDI 186

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
             +N+++ GY   G+G  A++ + E+     +  D       L AC   SA   G ++HG
Sbjct: 187 VSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHG 246

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             ++ G ++DV V   L++ Y +CG++     VF +M  R VV+W  +I   A  + P +
Sbjct: 247 YAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVD 306

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A   F +M  +G +   VT + +++ACA+ ++   G  V AY+       + ++  AL++
Sbjct: 307 AFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLE 366

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K G V++++++FG+  D+ LV  N +++ Y+ + + +EA+A+  E+L     PD  T
Sbjct: 367 MYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFT 426

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M + V A   LG +   +  H Y+++ G      I N ++ MY +CG    +  IFD M 
Sbjct: 427 MTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMP 486

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            K V+SWN++I G   +G  + A E+F EM
Sbjct: 487 GKDVISWNTIIIGYAIHGQGKIALEMFDEM 516



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 167/374 (44%), Gaps = 36/374 (9%)

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L+  ++  G +D A   F         L N ++  +    L  +ALA    ML  G RP
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           DR T    +   A+ G L  GR  H  V++ GL       N+++ +Y K G    A R+F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           D M  + +VSWN+++ G + NG    A   F EM        N  L              
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREM--------NDAL-------------- 216

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
                   ++  D V ++   +AC    AL L + I+ Y  ++G+  D+++ T+LVDM+ 
Sbjct: 217 --------QVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYC 268

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG+   A  VF +M  R V  W   IG  A+      A + F +M   G + + +  + 
Sbjct: 269 KCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAIN 328

Query: 579 VLTACSH--GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +LTAC+     L  +  H +  +   H + P +V    ++++ G+ G + E+ + I    
Sbjct: 329 LLTACAQTESSLFGRSVHAY--VVRRHFL-PHVVLETALLEMYGKVGKV-ESSEKIFGQI 384

Query: 637 VEPNDVIWGSLLAA 650
            +   V W +++AA
Sbjct: 385 TDKTLVSWNNMIAA 398



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 23/241 (9%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           +GS++ CK      Q H +I+K G G     ++ V+   A+ G   ++  +++ FD    
Sbjct: 437 LGSIRQCK------QMHSYIVKLGYGDSTLIMNAVMHMYARCG---NIVASREIFDKMPG 487

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S     +N++I GY+  G G  A+ ++ E+   G+ P++ TF  VL AC+ S    
Sbjct: 488 KDVIS-----WNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEA 542

Query: 156 EGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS-WTSLICA 213
           EG +   ++ +  G    +    C+ +  G  G++ +  R  + M        W SL+ A
Sbjct: 543 EGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTA 602

Query: 214 CARR---DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
              +   D+ + A    F++       N+   V + S  A     E  +R+ + + E G+
Sbjct: 603 SRNKNDIDIAEYAAERIFQLEHN----NTGCYVVLSSMYADAGRWEDVERIRSLMKEKGL 658

Query: 271 K 271
           +
Sbjct: 659 R 659


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 262/800 (32%), Positives = 433/800 (54%), Gaps = 48/800 (6%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q HC  +K G     S  + +V T  +   F+     +K FD   + N     +  + +
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD---GRKVFDEMKERN-----VVTWTT 164

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI GY+   +  E ++L++ +   G  P+ FTF   L    +    G G+QVH  +VK G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            D+ + V N LIN Y +CG++   R +FD+   ++VV+W S+I   A   L  EA+ +F+
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M    ++ +  +   VI  CA L+ L   +++   + + G   +  +  AL+  Y KC 
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344

Query: 289 AVDTAKQLFGE--CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           A+  A +LF E  C   N+V    ++S +++     EA+ +  EM   G RP+  T    
Sbjct: 345 AMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           ++A      ++     H  V++   E   ++   ++D Y+K GK E A ++F  + +K +
Sbjct: 404 LTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+W++++AG  + G+ E+A ++F E+            GG                    
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTK----------GG-------------------- 489

Query: 467 RIKVDRVTMVGVASACGYLGA-LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
            IK +  T   + + C    A +   K  + +  K+ +   + +++AL+ M+A+ G+ + 
Sbjct: 490 -IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A +VF+R  ++D+ +W + I   A  G   +A+++F EM ++ +K D + F+GV  AC+H
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV +G   F  M     ++P   H  CMVDL  RAG L +A+ +I++MP      IW 
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR 668

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           ++LAAC+ H+  ++   AAE+I  + PE S  +VLLSN+YA +G W   A+VR  M E+ 
Sbjct: 669 TILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K PG S IEV  K + F +GD SHP  + I   L +++ RL+D GY PD + VL D+D
Sbjct: 729 VKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDID 788

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           ++ K+ +L+ HSE+LA+AFGLI+T K  P+ ++KNLR+C DCH   KL++K+ +REI+VR
Sbjct: 789 DEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVR 848

Query: 826 DNNRFHFFRQ-GSCSCSDFW 844
           D+NRFH F   G CSC DFW
Sbjct: 849 DSNRFHHFSSDGVCSCGDFW 868



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 153/571 (26%), Positives = 259/571 (45%), Gaps = 41/571 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           Y SL+ G+S  G   EA  L++ +   G+  D   F  VL           G Q+H   +
Sbjct: 61  YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI 120

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K GF  DV V   L++ Y +  +  DGR+VFDEM ERNVV+WT+LI   AR  +  E + 
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF  M  EG +PNS T    +   A+      G +V   + + G+     + N+L+++Y+
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG V  A+ LF + + +++V  N+++S Y   GL  EAL +   M L+  R    +  S
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NK 404
            +   A L +L      H  V++ G     +I   ++  Y KC     A R+F  +    
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VVSW ++I+G ++N   E A ++FSEM  +             + N F      + V+L
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-----------VRPNEFT-----YSVIL 404

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
                    T + V S             ++A + K        + TAL+D + + G  +
Sbjct: 405 ---------TALPVISPSE----------VHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A +VF  ++ +D+ AW+A +   A  G  E A+++F E+ + GIKP+   F  +L  C+
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
                      F        +   +     ++ +  + G +  A ++ K    E + V W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSW 564

Query: 645 GSLLAACQKH----QNVDIAAYAAERITELD 671
            S+++   +H    + +D+     +R  ++D
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 183/395 (46%), Gaps = 32/395 (8%)

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + +   +FD+   R+  S+ SL+   +R    +EA  LF  +   G++ +      V+  
Sbjct: 43  LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
            A L +   G ++     + G   +  +  +LVD YMK       +++F E K+RN+V  
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
            T++S Y R  +  E L +   M   G +P+  T  +A+   A+ G    G   H  V++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           NGL+    + N++I++Y+KCG    A  +FD    K+VV+WNS+I+G   NG        
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG-------- 274

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
                                  +  EA+ +F  M    +++   +   V   C  L  L
Sbjct: 275 -----------------------LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              + ++  + K G   D  + TAL+  +++C     A+++F+ +    +V +WTA I  
Sbjct: 312 RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
                  E+AV+LF+EM R+G++P+   +  +LTA
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 2/236 (0%)

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G + +  + +A  +F + PGRD  S+ ++L G +++   +EA  LF  +    +++D   
Sbjct: 36  GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              V      L      + ++    K G   D+ + T+LVD + +  + +   +VF  M+
Sbjct: 96  FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           +R+V  WT  I   A     ++ + LF  M  +G +P+S  F   L   +  G+  +G  
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +  ++   +G+   I     +++L  + G + +A  L     V+ + V W S+++ 
Sbjct: 216 V-HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG 269


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/602 (41%), Positives = 359/602 (59%), Gaps = 38/602 (6%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+  Y  CG     +++F E  DRN+V  N ++ +YV      + L +  EM+  G RPD
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T    + A +   +L  G + HG VL+ GL+    + N +I MY KCG    A R+FD
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG------------------------- 434
            M  K VVSWNS++AG   N   + A E+  EM                           
Sbjct: 179 EMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV 238

Query: 435 ------------RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                       ++ ISWN M+    + ++  +A++L+  M   R++ D +T   V  AC
Sbjct: 239 LYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPAC 298

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           G L AL L + I+ Y+EK  +  ++ L  +L+DM+ARCG    A +VF RM+ RDV++WT
Sbjct: 299 GDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWT 358

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + I A  M G G  AV LF EML  G  PDSI FV +L+ACSH GL+++G   F+ MTD 
Sbjct: 359 SLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDD 418

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           + ++P+I HY C+VDLLGRAG + EA ++IK MP+EPN+ +W +LL++C+   N+DI   
Sbjct: 419 YRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGIL 478

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA+ + +L PE+SG +VLLSNIYA AG+W  V  +R  MK + IRK PG S++E+N +VH
Sbjct: 479 AADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVH 538

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F +GD SHP+   I   L  +  ++++ GYVP+  + L DV+E++K+  L+ HSEKLA+
Sbjct: 539 TFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAI 598

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
            F L++T +   IR+ KNLR+C DCH  AKL+SK+ +REIIVRD NRFH F+ G CSC D
Sbjct: 599 VFALLNTQEYQ-IRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGD 657

Query: 843 FW 844
           +W
Sbjct: 658 YW 659



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 217/497 (43%), Gaps = 73/497 (14%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L     +  LK+ H  I        PS   K++ + A  G    LT  +K FD      
Sbjct: 27  ALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGE-PGLT--RKVFD-----E 78

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
            +   +  YN +IR Y       + + ++ E+   G  PD +T+P VL AC+ S     G
Sbjct: 79  MSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG 138

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           + +HG ++K+G D ++FV N LI  YG+CG + + RRVFDEM  ++VVSW S++   A  
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHN 198

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
               +A+ +  EM + G KP+  TM  ++ A A   +                  N L V
Sbjct: 199 MRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS-----------------ENVLYV 241

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
                           +++F   + +NL+  N ++  Y++  L  +A+ +  +M      
Sbjct: 242 ----------------EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVE 285

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD +T  S + A   L  LL GR  H YV +  L     + N++IDMY +CG  + A R+
Sbjct: 286 PDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRV 345

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD M  + V SW SLI+                               G+T +     A+
Sbjct: 346 FDRMKFRDVASWTSLISAY-----------------------------GMTGQGC--NAV 374

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDM 516
            LF  ML+     D +  V + SAC + G LD  +  +  +  +  I   ++    LVD+
Sbjct: 375 ALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDL 434

Query: 517 FARCGDPQRAMQVFRRM 533
             R G    A  + ++M
Sbjct: 435 LGRAGRVDEAYNIIKQM 451



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 2/157 (1%)

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
           H +  L   L+  +A CG+P    +VF  M  R+V  +   I +       +  + +F E
Sbjct: 50  HQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFRE 109

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M+  G +PD+  +  VL ACS    +  G  +   +  + G+   +     ++ + G+ G
Sbjct: 110 MVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKV-GLDFNLFVGNGLIAMYGKCG 168

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            L EA  +   M +  + V W S++A    +   D A
Sbjct: 169 CLFEARRVFDEM-IWKDVVSWNSMVAGYAHNMRFDDA 204


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/795 (32%), Positives = 430/795 (54%), Gaps = 41/795 (5%)

Query: 52   HCHILKQG-LGHKPSYISKVVCTC-AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
            H H+++ G L     + + V+     ++G F S   A + FD   + N  S     + +L
Sbjct: 451  HGHVVRSGGLARLDLFCANVLLNMYTKVGPFGS---AHRVFDGLPERNMVS-----FVTL 502

Query: 110  IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
            ++G++  G   EA +L+  L   G   ++F    VL         G    VH    K+G 
Sbjct: 503  VQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGH 562

Query: 170  DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
            DR+ FV + LI+ Y  CG + D RRVFD +  ++ V+WT+++   +  D P+  + +F +
Sbjct: 563  DRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSK 622

Query: 230  MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
            M     K N   +  V+ A   L ++ LG  + A   +        +  AL+DMY KCG 
Sbjct: 623  MRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGN 682

Query: 290  VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
            ++ A+  F    + +++L + ++S Y +     +A  +   M+     P+  ++ S + A
Sbjct: 683  IEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQA 742

Query: 350  SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
             A +  L  G+  H + ++ G E    + N +ID+Y KC                     
Sbjct: 743  CANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCS-------------------- 782

Query: 410  NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                       D+ES+ E+FS +   + +SWNT++ G ++    E A+ +FR M +  + 
Sbjct: 783  -----------DMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVP 831

Query: 470  VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
              +VT   V  AC    +++    ++  IEK+  + D  ++ +L+D +A+CG  + A ++
Sbjct: 832  STQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREI 891

Query: 530  FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
            F  +++ D+ +W A I   A+ G    A ELF+ M +  IK + I FV +L+ C   GLV
Sbjct: 892  FETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLV 951

Query: 590  NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +QG  LF SM   HG+ P + HY C+V LLGRAG L +AL+ I  +P  P+ ++W +LL+
Sbjct: 952  SQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLS 1011

Query: 650  ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
            +C  H+NV++  ++AE++ E++P+    +VLLSN+Y++AG    VA  R  M+  G+RK 
Sbjct: 1012 SCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKE 1071

Query: 710  PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
            PG S +E+ G+VH F+ G E HP M  I++ML  +N +    GYVPD   VL D++E++K
Sbjct: 1072 PGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQK 1131

Query: 770  KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
              +L  HSE+LA+A+GL+ T    PIR++KNLR C DCH+  K++SK+  +EIIVRD NR
Sbjct: 1132 VRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINR 1191

Query: 830  FHFFRQGSCSCSDFW 844
            FH F +G+CSC D+W
Sbjct: 1192 FHHFEEGTCSCGDYW 1206



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/526 (23%), Positives = 229/526 (43%), Gaps = 35/526 (6%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG--FDRDVFVENCLINFYGECGDIVDGRR 194
           D + +  +L  C        G  VHG +V+ G     D+F  N L+N Y + G      R
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFD + ERN+VS+ +L+   A R   +EA  LF  +  EG + N   +  V+     +  
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L L   V A   +LG   NA + +AL+D Y  CG V  A+++F     ++ V    ++S 
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y         L I  +M +   + +   + S + A+  L  ++ G+  H   ++   +  
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             +   ++DMY KCG  E A   F+ ++N  V+ W                         
Sbjct: 667 RHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILW------------------------- 701

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
                 + M+    Q N  E+A ELF  M+   +  +  ++  V  AC  +  LDL K I
Sbjct: 702 ------SLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQI 755

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           + +  K G   ++ +  AL+D++A+C D + ++++F  +   +  +W   I   +  G G
Sbjct: 756 HNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFG 815

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           E A+ +F EM    +    + +  VL AC+    +N    +   + +    +   +    
Sbjct: 816 EAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQV-HCLIEKSTFNSDTIVSNS 874

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           ++D   + G + +A ++ +++  E + V W ++++    H    +A
Sbjct: 875 LIDSYAKCGCIRDAREIFETLK-ECDLVSWNAIISGYAVHGQAAMA 919


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/673 (37%), Positives = 386/673 (57%), Gaps = 12/673 (1%)

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
           +F  N ++  Y +   +     +FD M ER+VVSW  ++ A ++    +EA+ +  +M  
Sbjct: 204 MFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 263

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
           +G++ +S T    ++ACA+L +L  G ++ A +       +  + +ALV++Y K G    
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKE 323

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           AK +F    DRN V    ++S +++ G   E++ + ++M       D+  + + +S    
Sbjct: 324 AKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCS 383

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
             DL  GR  H   L++G      + N++I MY KC   + A  IF  M+ K +VSW S+
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSM 443

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVD 471
           I    + G+V  ARE F  M  ++ I+WN MLG   Q    E+ + +++VMLSE  ++ D
Sbjct: 444 ITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPD 503

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
            VT V +   C  LGA  L   I     K G+  D  +A A++ M+++CG    A +VF 
Sbjct: 504 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFD 563

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            +  +D+ +W A I   +  G G+QA+E+F+++L++G KPD I +V VL+ CSH GLV +
Sbjct: 564 FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQE 623

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
           G   F  M   H +SP + H+ CMVDLLGRAG L EA DLI  MP++P   +WG+LL+AC
Sbjct: 624 GKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSAC 683

Query: 652 QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
           + H N ++A  AA+ + ELD   SG ++L++ IYA AGK  + A++R  M+++GI+K PG
Sbjct: 684 KIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPG 743

Query: 712 SSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
            S +EV+ KVH F + D SHP++  I   L E+  ++   GYV          D    + 
Sbjct: 744 YSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR--------TDSTRSEI 795

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
              HHSEKLA+AFGL++    MPI ++KNLR+C DCH+  KL+S V  RE ++RD  RFH
Sbjct: 796 ---HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFH 852

Query: 832 FFRQGSCSCSDFW 844
            F  GSCSC D+W
Sbjct: 853 HFNGGSCSCGDYW 865



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/536 (23%), Positives = 229/536 (42%), Gaps = 99/536 (18%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV----- 195
           F   L +C    A      +HG +V +G    VF++N L++ Y  CG + D RR+     
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66

Query: 196 ---------------------------FDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
                                      F  M  R+V SW +L+    +      ++  F 
Sbjct: 67  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126

Query: 229 EMVEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            M   G   PN+ T+ C + +C  L    L  ++ A + +   + ++ +  ALVDM+++C
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRL----------------------------- 318
           GAVD A +LF   K+  +   N++++ YV+                              
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 319 --GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
             G  REAL ++ +M   G R D  T  S+++A A+L  L  G+  H  V+RN       
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + + ++++Y K G  + A  +F+ + ++  V+W  LI+G ++ G                
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYG---------------- 350

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                           F E++ELF  M +E + +D+  +  + S C     L L + +++
Sbjct: 351 ---------------CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHS 395

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
              K+G    + ++ +L+ M+A+C + Q A  +FR M ++D+ +WT+ I A +  GN  +
Sbjct: 396 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAK 455

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           A E F+ M  + +    I +  +L A    G    G  +++ M     V P  V Y
Sbjct: 456 AREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTY 507



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 188/389 (48%), Gaps = 9/389 (2%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N +  N +++ Y K G +  A +LFG    R++   NT+MS Y +   +R+ L  L+  L
Sbjct: 70  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQ---SRQYLVSLETFL 126

Query: 333 -LH---GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +H      P+  T+  A+ +   LG           V +   +    +   ++DM+++C
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G  ++A R+F  +   T+   NS++AG +K   V+ A E+F  MP RD +SWN M+  L+
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           Q     EA+++   M S+ +++D  T     +AC  L +L   K ++A + +N  H D  
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +A+ALV+++A+ G  + A  VF  +  R+  AWT  I      G   ++VELFN+M  + 
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 366

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           +  D      +++ C     +  G  L  S+    G    +V    ++ +  +   L  A
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQL-HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
             + + M  E + V W S++ A  +  NV
Sbjct: 426 EAIFRFMN-EKDIVSWTSMITAYSQVGNV 453



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 215/505 (42%), Gaps = 72/505 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N ++   S  G   EA+ + V++   G+  D  T+   L AC + S+   G Q+H  ++
Sbjct: 238 WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 297

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +     D +V + L+  Y + G   + + VF+ + +RN V+WT LI    +     E+V 
Sbjct: 298 RNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVE 357

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF +M  E +  +   +  +IS C    +L LG ++ +   + G     ++ N+L+ MY 
Sbjct: 358 LFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 417

Query: 286 KC-------------------------------GAVDTAKQLFGECKDRNLVLCNTIMSN 314
           KC                               G V  A++ F    ++N++  N ++  
Sbjct: 418 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGA 477

Query: 315 YVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
           Y++ G   + L +   ML     RPD VT ++     A LG    G    G  ++ GL  
Sbjct: 478 YIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLII 537

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
             S+ N +I MY KCG+   A ++FD ++ K +VSWN++I G  ++G  + A E+F ++ 
Sbjct: 538 DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 597

Query: 434 GR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
            R    D+IS+  +L G +   + +E    F +M                          
Sbjct: 598 KRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMK------------------------- 632

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAM 548
                      + I   ++  + +VD+  R G    A  +   M  K     W A + A 
Sbjct: 633 ---------RAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSAC 683

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDS 573
            + GN E A EL  + + +   PDS
Sbjct: 684 KIHGNNELA-ELAAKHVFELDSPDS 707


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/836 (31%), Positives = 438/836 (52%), Gaps = 65/836 (7%)

Query: 40  KNCKTLNELKQPHCH----ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY--- 92
           +N  T     +PH H    I+K G        + +V +  Q G    L  A+K FD    
Sbjct: 73  RNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRG---DLNGARKLFDEMPH 129

Query: 93  ------------YIKDNETSATLFMYNS-----------LIRGYSCIGLGVEAISLYVEL 129
                       YIK    S    +++S           LI GY+      EA  L++E+
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              GI PD  +   +L+  T+  +  E  QVH  ++K+G+D  + V N L++ Y +   +
Sbjct: 190 GRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSL 249

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
               ++F+++ ER+ V++ +L+   ++    +EA+ LFF+M E G +P   T   +++A 
Sbjct: 250 GLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAG 309

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
            +L ++E G +V  ++ +     N  + NAL+D Y K   V  A +LF E  + + +  N
Sbjct: 310 IQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYN 369

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            +++ Y   G  +E+L +  E+   G         + +S +A   +L  GR  H   +  
Sbjct: 370 VLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
                  + N+++DMY KCG                               +   A  +F
Sbjct: 430 DAISEILVGNSLVDMYAKCG-------------------------------EFGEANRIF 458

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
           S++  +  + W  M+    Q+ + E+ ++LF  M   +I  D  T   +  AC  L +L 
Sbjct: 459 SDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLT 518

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
           L K ++++I  +G   ++   +ALVDM+A+CG  + A+Q+F+ M  R+  +W A I A A
Sbjct: 519 LGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYA 578

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
             G+G+  + LF EM+R G++PDS+  + +L ACSH GLV +G   F SMT I+ + P+ 
Sbjct: 579 QNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKK 638

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HY   +D+L R G   EA  L+  MP EP++++W S+L +C  H+N ++A  AA ++  
Sbjct: 639 EHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFN 698

Query: 670 LDPEKSGV-HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           +   +    +V +SNIYA+AG+W NV +V+  M+E+G++K+P  S +E+  K H FT+ D
Sbjct: 699 MKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTAND 758

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           ++HP+M  I   L E+  ++   GY PD +  L +VDE+ K   L +HSE++A+AF LIS
Sbjct: 759 KTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALIS 818

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           T +  PI V+KNLR C DCH+  K++SK+  REI VRD++RFH FR G C+C D+W
Sbjct: 819 TPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/782 (34%), Positives = 437/782 (55%), Gaps = 56/782 (7%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP-DKFT 140
           SL  A++AFD   + ++    +  +N++I  +   G   EA+ L+ ++   G  P +  T
Sbjct: 57  SLIDAKQAFDRLPRASKRD--VVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVT 114

Query: 141 FPFVLNACTKSSAFG-EGVQ-VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF-- 196
           F  VL++C ++     E V+ +HG IV  G +R+ FV   L++ YG+ G + D   VF  
Sbjct: 115 FVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLR 174

Query: 197 --DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
             DE    ++V+ +++I AC +   P+E++ LF+ M  EG KP+ VT+V V++AC+ L  
Sbjct: 175 KSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSML-- 232

Query: 255 LELGDRVCAYIDELGMKA-----NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             +G    A++ E  M+      + ++   L+  Y +   +  A+  F   +  ++V  N
Sbjct: 233 -PVGS-ATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWN 290

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA----QLGDLLCGRMCHGY 365
            + + Y++    REAL + + MLL G RP   T ++A++A A    Q    + G+     
Sbjct: 291 AMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI-GKRIQSL 349

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +   GLEG  ++ N  ++MY KCG    A  +F+ +S                       
Sbjct: 350 LEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTR-------------------- 389

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVASACGY 484
                    RD I+WN+ML       + +EA ELF+ M +E+ +K ++VT V V  A   
Sbjct: 390 ---------RDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTS 440

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME--KRDVSAWT 542
             ++   + I+A +  NG   D  +  AL++M+A+CG    A  +F +    + DV AWT
Sbjct: 441 RTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWT 500

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + +   A  G  E+A++LF  M +QG++P+ I F+  LTAC+HGG + QG  L   MT  
Sbjct: 501 SLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPD 560

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           HG+ P   H+ C+VDLLGR G L EA  L++    + + + W +LL AC+  + ++    
Sbjct: 561 HGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGER 619

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
            AERI +LDPE +  +++L+++YA+AG+W   A +R  M ++GIR  PG S++EVN ++H
Sbjct: 620 CAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELH 679

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F++GD+SHP+   I   L  ++  ++ AGYV D   VL DV ++ K+ LL  HSEKLA+
Sbjct: 680 SFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAI 739

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGL+ST    P+RV+KNLR+C DCH+  KL+SKV  R+I++RD++R+H F  G+CSC D
Sbjct: 740 AFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGD 799

Query: 843 FW 844
           +W
Sbjct: 800 YW 801



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 253/549 (46%), Gaps = 58/549 (10%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P+      ++NAC+       G ++H  I    F+ +  + N LI+ Y +CG ++D +
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 194 RVFDEM---SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI-KPNSVTMVCVISAC 249
           + FD +   S+R+VV+W ++I A  R    +EA+ LF +M  +G   PNSVT V V+ +C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 250 --AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR---- 303
             A L +LE    +   I   G++  A +  ALVD Y K G++D A ++F    D     
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           +LV C+ ++S   + G  +E+L +   M L G +P  VT++S ++A +    +L      
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS----MLPVGSAT 238

Query: 364 GYVLRNGLEGWDS-----ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
            +VL   +E   +     +  T++  Y +      A   FD + +  VVSWN++ A  + 
Sbjct: 239 AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYL- 297

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
                                         Q +   EA+ LF  ML E ++    T +  
Sbjct: 298 ------------------------------QHHRPREALVLFERMLLEGVRPSVATFITA 327

Query: 479 ASACGYL---GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME- 534
            +AC       A  + K I + +E+ G+  D  +A A ++M+A+CG    A  VF R+  
Sbjct: 328 LTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISP 387

Query: 535 -KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQG 592
            +RD   W + + A    G G++A ELF  M  +  +KP+ + FV VL A +    + QG
Sbjct: 388 TRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQG 447

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAAC 651
             +   +   +G     V    ++++  + G L +A  +         DVI W SL+A  
Sbjct: 448 REIHARVVS-NGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGY 506

Query: 652 QKHQNVDIA 660
            ++   + A
Sbjct: 507 AQYGQAERA 515



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/545 (24%), Positives = 247/545 (45%), Gaps = 62/545 (11%)

Query: 24  HKAKTTPKDSPSIGSLKNCK-----TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMG 78
           H     P     +  L +C      +L +++  H  I+  G+  +    + +V +  ++G
Sbjct: 104 HDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLG 163

Query: 79  TFESLTYAQKAFDYYIK--DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP 136
           + +       A++ +++  D E S +L   +++I      G   E++ L+  +   G  P
Sbjct: 164 SLD------DAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKP 217

Query: 137 DKFTFPFVLNACT-----KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
              T   VLNAC+      ++AF     +  A+  +   RD  +   L+  Y    D+  
Sbjct: 218 SGVTLVSVLNACSMLPVGSATAF----VLEQAMEVVSATRDNVLGTTLLTTYARSNDLSR 273

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R  FD +   +VVSW ++  A  +   P+EA+ LF  M+ EG++P+  T +  ++ACA 
Sbjct: 274 ARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAA 333

Query: 252 L---QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLV 306
                   +G R+ + ++E G++ +  + NA ++MY KCG++  A+ +F       R+ +
Sbjct: 334 YPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCI 393

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
             N++++ Y   GL +EA  +   M      +P++VT ++ + AS     +  GR  H  
Sbjct: 394 TWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHAR 453

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN--KTVVSWNSLIAGLIKNGDVE 423
           V+ NG E    I N +++MY KCG  + A  IFD  S+  + V++W SL+AG  + G   
Sbjct: 454 VVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQA- 512

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
                                         E A++LF  M  + ++ + +T +   +AC 
Sbjct: 513 ------------------------------ERALKLFWTMQQQGVRPNHITFISALTACN 542

Query: 484 YLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           + G L+   + +      +GI    +  + +VD+  RCG    A ++  R  + DV  W 
Sbjct: 543 HGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWM 602

Query: 543 AAIGA 547
           A + A
Sbjct: 603 ALLDA 607


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/726 (33%), Positives = 397/726 (54%), Gaps = 39/726 (5%)

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
            Q H  I+K G   D ++   LI  Y       D   V   + +  + S++SLI A  + 
Sbjct: 35  TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            L  +++ +F  M   G+ P+S  +  +   CA+L   ++G ++       G+  +A + 
Sbjct: 95  KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
            ++  MYM+CG +  A+++F    D+++V C+ ++  Y R G   E + IL EM   G  
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214

Query: 338 -----------------------------------PDRVTMLSAVSASAQLGDLLCGRMC 362
                                              PD+VT+ S + +      L  GR+ 
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           HGYV++ GL     + + MIDMY K G       +F+          N+ I GL +NG V
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334

Query: 423 ESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           + A E+F     +    + +SW +++ G  Q     EA+ELFR M    +K + VT+  +
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             ACG + AL   +  + +  +  +  ++ + +AL+DM+A+CG    +  VF  M  +++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
             W + +   +M G  ++ + +F  ++R  +KPD I F  +L+AC   GL ++GW  F+ 
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M++ +G+ P++ HY CMV+LLGRAG L EA DLIK MP EP+  +WG+LL +C+   NVD
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +A  AAE++  L+PE  G +VLLSNIYA+ G WT V  +R +M+  G++K PG S I+V 
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
            +V+   +GD+SHP+++ I+  + E++  +R +G+ P+L   L DV+EQE++ +L  HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLA+ FGL++T    P++V+KNLR+C DCH+  K +S    REI +RD NRFH F+ G C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754

Query: 839 SCSDFW 844
           SC DFW
Sbjct: 755 SCGDFW 760



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/581 (24%), Positives = 243/581 (41%), Gaps = 113/581 (19%)

Query: 50  QPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           Q H  ILK G      YIS K++ + +    F       ++            T++ ++S
Sbjct: 36  QAHARILKSG-AQNDGYISAKLIASYSNYNCFNDADLVLQSI--------PDPTIYSFSS 86

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI   +   L  ++I ++  +   G++PD    P +   C + SAF  G Q+H      G
Sbjct: 87  LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            D D FV+  + + Y  CG + D R+VFD MS+++VV+ ++L+CA AR+   +E V +  
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206

Query: 229 EMVEEGIK-----------------------------------PNSVTMVCVISACAKLQ 253
           EM   GI+                                   P+ VT+  V+ +    +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            L +G  +  Y+ + G+  +  +++A++DMY K G V     LF + +     +CN  ++
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326

Query: 314 NYVRLGLAR-----------------------------------EALAILDEMLLHGPRP 338
              R GL                                     EAL +  EM + G +P
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           + VT+ S + A   +  L  GR  HG+ +R  L     + + +IDMY KCG+  ++  +F
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           + M  K +V WNSL+ G   +G                                 +E M 
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKA-------------------------------KEVMS 475

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMF 517
           +F  ++  R+K D ++   + SACG +G  D   K+     E+ GI   ++  + +V++ 
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535

Query: 518 ARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
            R G  Q A  + + M  + D   W A + +  ++ N + A
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 389/670 (58%), Gaps = 4/670 (0%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           LI      GD    R++FD + + +  + ++LI A     L  EA+ ++  + E GIKP+
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
               +    ACA   +      V       G+ ++  + NAL+  Y KC  V+ A+++F 
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           +   R++V   ++ S YV+ G  R+ + +  EM   G +P+ +T+ S + A A+L DL  
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G+  HG+ +R+G+     +C+ ++ +Y KC     A  +FD M ++ VVSWN ++    K
Sbjct: 284 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 343

Query: 419 NGDVESAREVFSEMPG----RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           N + E    +F +M       D  +WN ++GG  +    EEA+E+FR M     K + +T
Sbjct: 344 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 403

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +  +  AC +   L + K I+ Y+ ++    D+   TAL+ M+A+CGD   +  VF  M 
Sbjct: 404 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 463

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           ++DV AW   I A AM GNG++A+ LF++ML   ++P+S+ F GVL+ CSH  LV +G  
Sbjct: 464 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 523

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +F SM   H V P   HY C+VD+  RAG L EA   I+ MP+EP    WG+LLAAC+ +
Sbjct: 524 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVY 583

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +NV++A  +A+++ E++P   G +V L NI  +A  W+  ++VR+ MKE+GI K PG S 
Sbjct: 584 KNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSW 643

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           ++V  KVH F  GD+S+ E + I + L E+  +++ AGY PD   VL D+D++EK   L 
Sbjct: 644 LQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLC 703

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEKLA+AFG+++ +    IRV KNLR+C DCH+  K +SKV    I+VRD+ RFH F+
Sbjct: 704 NHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFK 763

Query: 835 QGSCSCSDFW 844
            G+CSC D W
Sbjct: 764 NGNCSCKDLW 773



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 240/532 (45%), Gaps = 77/532 (14%)

Query: 64  PSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEA 122
           PS++  +++     +G F     A++ FD   + + T+ +     +LI   +  GL  EA
Sbjct: 97  PSHLGLRLIRVALNVGDFNR---ARQLFDNIPQPDPTTCS-----TLISALTTHGLSNEA 148

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           I +Y  L   GI PD   F     AC  S       +VH    + G   DVFV N LI+ 
Sbjct: 149 IKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHA 208

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           YG+C  +   RRVFD++  R+VVSWTSL     +   P++ + +F EM   G+KPN +T+
Sbjct: 209 YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTV 268

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
             ++ ACA+L++L+ G  +  +    GM  N  + +ALV +Y KC +V  A+ +F     
Sbjct: 269 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 328

Query: 303 RNLVLCNTIMSNYVR-----------------------------------LGLAREALAI 327
           R++V  N +++ Y +                                    G + EA+ +
Sbjct: 329 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 388

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             +M   G +P+ +T+ S + A +   +L  G+  H YV R+   G  +    ++ MY K
Sbjct: 389 FRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAK 448

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG   ++  +FD M  K VV+WN++I                           N M G  
Sbjct: 449 CGDLNLSRNVFDMMRRKDVVAWNTMIIA-------------------------NAMHGN- 482

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCD 506
                 +EA+ LF  ML  R++ + VT  GV S C +   ++    I+  + ++  +  D
Sbjct: 483 -----GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPD 537

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
               + +VD+++R G    A +  + M  +   SAW A + A  +  N E A
Sbjct: 538 ANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELA 589



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 195/434 (44%), Gaps = 70/434 (16%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD  +  +  S T     SL   Y   G   + + ++ E+   G+ P+  T   +L
Sbjct: 218 ARRVFDDLVVRDVVSWT-----SLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSIL 272

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC +      G ++HG  V+ G   ++FV + L++ Y +C  + + R VFD M  R+VV
Sbjct: 273 PACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVV 332

Query: 206 SWTSLICA-----------------------------------CARRDLPKEAVYLFFEM 230
           SW  ++ A                                   C      +EAV +F +M
Sbjct: 333 SWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM 392

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
            + G KPN +T+  ++ AC+  +NL +G  +  Y+       +     AL+ MY KCG +
Sbjct: 393 QKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDL 452

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           + ++ +F   + +++V  NT++      G  +EAL + D+MLL   +P+ VT    +S  
Sbjct: 453 NLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGC 512

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSI------------CNTMIDMYMKCGKQEMACRIF 398
           +           H  ++  G++ ++S+             + ++D+Y + G+   A +  
Sbjct: 513 S-----------HSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFI 561

Query: 399 DHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLGGLTQENMF 453
             M    T  +W +L+A      +VE    SA+++F E+   +  ++ ++   L    M+
Sbjct: 562 QGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF-EIEPNNPGNYVSLFNILVTAKMW 620

Query: 454 EEAMELFRVMLSER 467
            EA ++ R+++ ER
Sbjct: 621 SEASQV-RILMKER 633



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            L   L+ +    GD  RA Q+F  + + D +  +  I A+   G   +A+++++ +  +
Sbjct: 99  HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 158

Query: 568 GIKPDSIVFVGVLTACSHGG 587
           GIKPD  VF+    AC+  G
Sbjct: 159 GIKPDMPVFLAAAKACAVSG 178


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/514 (43%), Positives = 331/514 (64%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M+  G +P++ T+ + V A A +  L  G+  H Y+++ G E    +   ++ MY +CG 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A  +FD MS ++  +WN++I G  +N D++ A ++F EM  RD +SW  ++ G  Q 
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
              +E++ +F  M    +K DR  M  V SAC  L AL+L +  +AY+ ++G   D+ + 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           +ALVDM+A+ G  + A QVF +M +R+  +W + I   A  G G  AV LF +ML+ GIK
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           P+ I FVGVL+ACSH GLVN+G   F  MT  +G+ P + HY CM+DLLGRAG L EA +
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            I  MPVEP+  +WG+LL AC+ H N ++A   AE +  ++ + +G++VLLSNIYA+AG+
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W + A+VR  MK++G+ K PG S IEV   +H F +G+ SHP++  I   L  ++ +++ 
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           AGYVP+   VL DV++ EK+  LSHHSEKLA+AFG+I+T+    IRV KNLR+C DCH+ 
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +S  + R+I+VRD NRFH F+ G CSC D+W
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 172/339 (50%), Gaps = 33/339 (9%)

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           + G G+ P++FT   V+ AC   ++  +G Q H  I+KMGF+ DV V+  L++ Y  CG 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 189 IVDGRRVFD-------------------------------EMSERNVVSWTSLICACARR 217
           + D   VFD                               EMSER+VVSWT++I   A+ 
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
               E++ +F +M + G+K +   M  V+SACA L  LELG +  AY+ + G   + ++ 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           +ALVDMY K G+++ A Q+F +   RN V  N+I++   + G   +A+ + ++ML  G +
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACR 396
           P+ ++ +  +SA +  G +  GR     + +N G+    S    MID+  + G  + A  
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 397 IFDHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEMPG 434
             + M  +  VS W +L+     +G+ E A+ +   + G
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLG 339



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 145/299 (48%), Gaps = 30/299 (10%)

Query: 22  NQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFE 81
           NQ    T  K   SI SL+      + KQ H +I+K G        + +V   A+ G+ E
Sbjct: 9   NQFTLSTVVKACASIASLE------QGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLE 62

Query: 82  SLTY--------AQKAFDYYI------KDNETSATLFM---------YNSLIRGYSCIGL 118
              +        + + ++  I      +D + +  LF          + ++I GY+  G 
Sbjct: 63  DAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGY 122

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
           G E+++++ ++   G+  D+F    VL+AC   +A   G Q H  +V+ GF  D+ V + 
Sbjct: 123 GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           L++ Y + G + D  +VFD+M +RN VSW S+I  CA+     +AV LF +M++ GIKPN
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALMVNALVDMYMKCGAVDTAKQL 296
            ++ V V+SAC+    +  G      + +  G+  +      ++D+  + G +D A+  
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENF 301


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/723 (34%), Positives = 397/723 (54%), Gaps = 51/723 (7%)

Query: 136 PDKFTFPF----VLNACTK------SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           PD F+F F    + ++C++      S+A      +H   V  GF  D FV + L   Y  
Sbjct: 111 PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFT 170

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVC 244
                D R+VFD +   + V W +L+   +      EA+  F  M   G ++P+S T+  
Sbjct: 171 LSRGNDARKVFDAVPSPDTVLWNTLLAGLSG----SEALEAFVRMAGAGSVRPDSTTLAS 226

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V+ A A++ N  +G  V A+ ++ G+  +  +V  L+ +Y KCG ++ A+ LF   +  +
Sbjct: 227 VLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPD 286

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           LV  N ++S Y   G+   ++ +  E++  G RP   T+++ +   +  G        H 
Sbjct: 287 LVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHA 346

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           +V++ GL+    +   +  +Y         CR                        D++S
Sbjct: 347 HVVKAGLDANAPVSTALTTLY---------CRF----------------------NDMDS 375

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           AR  F  MP +   SWN M+ G  Q  + E A+ LF+ M +  ++ + +T+    SAC  
Sbjct: 376 ARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQ 435

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           LGAL L KW++  I    +  ++ + TAL+DM+ +CG    A  +F  M+ ++V +W   
Sbjct: 436 LGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVM 495

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I    + G G +A++L+ +M+   + P S  F+ VL ACSHGGLV +G  +FRSMT  +G
Sbjct: 496 ISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYG 555

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAA 661
           ++P I H  CMVDLLGRAG L EA +LI   P   V P   IWG+LL AC  H++ D+A 
Sbjct: 556 ITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--IWGALLGACMVHKDGDLAK 613

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
            A++++ EL+PE +G +VLLSN+Y S  +++  A VR + K + + K PG + IE+  + 
Sbjct: 614 LASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRP 673

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           H F +GD +HP+ + I   L ++  ++ +AGY PD    L DV+E+EK++++  HSEKLA
Sbjct: 674 HVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLA 733

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +AFGL++T     IR++KNLR+C DCH+  K++SKV  R I+VRD +RFH FR G CSC 
Sbjct: 734 IAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCG 793

Query: 842 DFW 844
           D+W
Sbjct: 794 DYW 796



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 224/476 (47%), Gaps = 44/476 (9%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFV 144
           A+K FD        S    ++N+L+ G S    G EA+  +V +AG G + PD  T   V
Sbjct: 177 ARKVFDAV-----PSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTTLASV 227

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L A  + +    G  VH    K G  +   V   LI+ Y +CGD+   R +FD M   ++
Sbjct: 228 LPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDL 287

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           V++ +LI   +   +   +V LF E+V  G++P+S T+V +I   +   +  L   + A+
Sbjct: 288 VTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAH 347

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           + + G+ ANA +  AL  +Y +   +D+A++ F    ++ +   N ++S Y + GL   A
Sbjct: 348 VVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMA 407

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           +A+  +M     RP+ +T+ SA+SA AQLG L  G+  H  +    LE    +   +IDM
Sbjct: 408 VALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDM 467

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y+KCG    A  IFD M NK VVSWN +I+G   +G                        
Sbjct: 468 YVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQ----------------------- 504

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GI 503
                     EA++L++ M+   +     T + V  AC + G +     ++  +  + GI
Sbjct: 505 --------GAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGI 556

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA--WTAAIGAMAMEGNGEQA 557
              ++  T +VD+  R G  + A ++     K  V    W A +GA  +  +G+ A
Sbjct: 557 TPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLA 612


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/612 (38%), Positives = 369/612 (60%), Gaps = 4/612 (0%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P  ++   V      L  L+LG +V A++   G++  AL+ + +V  Y   G +D++  +
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F    + + +L N+++  Y R G A   +A    M   G   D  T    + +S +L  +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G+  HG +LR GL+    +  ++I +Y KCG+   A ++FD+M+ + V SWN+L+AG 
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER--IKVDRVT 474
            K+G +++A  +F  MP R+ +SW TM+ G +Q  + ++A+ LF  M+ E   ++ + VT
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           ++ V  AC  L  L+  + I+    + G++ +  +  AL  M+A+CG    A   F ++ 
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 367

Query: 535 K--RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +  +++ AW   I A A  G+G QAV  F EM++ GI+PD I F G+L+ CSH GLV+ G
Sbjct: 368 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F  M+  + ++P++ HY C+ DLLGRAG L EA  L+  MP+     IWGSLLAAC+
Sbjct: 428 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 487

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
           KH+N+++A  AA ++  L+PE +G +VLLSN+YA AG+W  V ++R  +K QG +K PG 
Sbjct: 488 KHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGC 547

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           S IE+NGK H F  GD SHP+   I   L  +  +++ AGY PD + VL D+ E+EK++ 
Sbjct: 548 SWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFN 607

Query: 773 LSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHF 832
           L  HSEKLA+AFG+++T     +RV KNLR+C DCH+    +S++Y RE+IVRD NRFH 
Sbjct: 608 LIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHH 667

Query: 833 FRQGSCSCSDFW 844
           F+ G CSC D+W
Sbjct: 668 FKGGCCSCGDYW 679



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 226/477 (47%), Gaps = 67/477 (14%)

Query: 8   SPLVLATPTVTTLTNQHKAKTTPKDSPSIGS---LKNCKTLNELK---QPHCHILKQGLG 61
           SPL ++     TL N  +  + P   P +      +    LN LK   Q H H+L +GL 
Sbjct: 47  SPLTISA----TLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQ 102

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
                 SK+V   A  G  +S      +   +    E S+ LF  NS+IR Y+  G    
Sbjct: 103 PTALVGSKMVAFYASSGDIDS------SVSVFNGIGEPSSLLF--NSMIRAYARYGFAER 154

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
            ++ Y  +  +G   D FTFPFVL +  +  +   G  VHG I+++G   D++V   LI 
Sbjct: 155 TVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLII 214

Query: 182 FYGECGDIVDGRRVFDEMS-------------------------------ERNVVSWTSL 210
            YG+CG+I D  +VFD M+                                RN+VSWT++
Sbjct: 215 LYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTM 274

Query: 211 ICACARRDLPKEAVYLFFEMVEE--GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           I   ++  L ++A+ LF EMV+E  G++PN VT++ V+ ACA+L  LE G ++      +
Sbjct: 275 ISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRM 334

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGEC--KDRNLVLCNTIMSNYVRLGLAREALA 326
           G+ +NA ++ AL  MY KCG++  A+  F +    ++NL+  NT+++ Y   G   +A++
Sbjct: 335 GLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVS 394

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTM 381
              EM+  G +PD +T    +S  +  G +  G      M   Y +   +E +  +    
Sbjct: 395 TFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVA--- 451

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVE----SAREVFSEMP 433
            D+  + G+   A ++   M      S W SL+A   K+ ++E    +AR++F   P
Sbjct: 452 -DLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEP 507


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 281/817 (34%), Positives = 427/817 (52%), Gaps = 64/817 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCT----CAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           KQ H H+ K G G     ++  +      C   G         K FD   + N+ S    
Sbjct: 113 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA------VYKVFDRISERNQVS---- 162

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK---SSAFGEGVQVH 161
            +NSLI           A+  +  +    + P  FT   V  AC+          G QVH
Sbjct: 163 -WNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVH 221

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
              ++ G + + F+ N L+  YG+ G +   + +      R++V+W +++ +  + +   
Sbjct: 222 AYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFL 280

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNAL 280
           EA+    EMV EG++P+  T+  V+ AC+ L+ L  G  + AY  + G +  N+ + +AL
Sbjct: 281 EALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 340

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPD 339
           VDMY  C  V +  ++F    DR + L N +++ Y +     EAL +  EM    G   +
Sbjct: 341 VDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLAN 400

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             TM   V A  + G        HG+V++ GL+    + N ++DMY + GK ++A RI  
Sbjct: 401 STTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRI-- 458

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA--- 456
                                        F +M  RD ++WNT++ G       E+A   
Sbjct: 459 -----------------------------FGKMEDRDLVTWNTIITGYVFSERHEDALLM 489

Query: 457 ---MELFRVMLSER-----IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
              M++     SER     +K + +T++ +  +C  L AL   K I+AY  KN +  D+ 
Sbjct: 490 LHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 549

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           + +ALVDM+A+CG  Q + +VF ++  R+V  W   + A  M GN + A+++   M+ QG
Sbjct: 550 VGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQG 609

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           +KP+ + F+ V  ACSH G+VN+G  +F +M   +GV P   HY C+VDLLGRAG + EA
Sbjct: 610 VKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEA 669

Query: 629 LDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
             LI  +P   +    W SLL AC+ H N++I   AA+ + +L+P  +  +VLL+NIY+S
Sbjct: 670 YQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 729

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
           AG W     VR  MK QG+RK PG S IE   +VH+F +GD SHP+   +   L  +  R
Sbjct: 730 AGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWER 789

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +R  GY+PD + VL +V+E EK+ LL  HSEKLA+AFG+++TS    IRV KNLR+C DC
Sbjct: 790 MRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 849

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H   K +SKV DREII+RD  RFH F+ G+CSC D+W
Sbjct: 850 HLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 267/552 (48%), Gaps = 49/552 (8%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD-VFVENCL 179
           EA+  Y+++   GI PD F FP +L A         G Q+H  + K G+  D V V N L
Sbjct: 76  EAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTL 135

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           +N Y +CGD     +VFD +SERN VSW SLI +    +  + A+  F  M++E ++P+S
Sbjct: 136 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSS 195

Query: 240 VTMVCVISACAKL---QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            T+V V  AC+     + L +G +V AY    G + N+ ++N LV MY K G + ++K L
Sbjct: 196 FTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVL 254

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
            G  + R+LV  NT++S+  +     EAL  L EM+L G  PD  T+ S + A + L  L
Sbjct: 255 LGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEML 314

Query: 357 LCGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
             G+  H Y L+NG L+    + + ++DMY  C +    CR+FD M ++ +  WN++I G
Sbjct: 315 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITG 374

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
             +N   E A  +F EM                     EE+  L           +  TM
Sbjct: 375 YAQNEYDEEALLLFIEM---------------------EESAGLL---------ANSTTM 404

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
            GV  AC   GA    + I+ ++ K G+  D  +  AL+DM++R G    A ++F +ME 
Sbjct: 405 AGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMED 464

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEML-----------RQGIKPDSIVFVGVLTACS 584
           RD+  W   I         E A+ + ++M            R  +KP+SI  + +L +C+
Sbjct: 465 RDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCA 524

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
               + +G  +  +    + ++  +     +VD+  + G L  +  +   +P+  N + W
Sbjct: 525 ALSALAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITW 582

Query: 645 GSLLAACQKHQN 656
             ++ A   H N
Sbjct: 583 NVIVMAYGMHGN 594



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 210/469 (44%), Gaps = 63/469 (13%)

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W  L+ +  R +L +EAV  + +M+  GIKP++     ++ A A LQ+++LG ++ A++ 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 267 ELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
           + G   +++ V N LV++Y KCG      ++F    +RN V  N+++S+         AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLG---DLLCGRMCHGYVLRNGLEGWDSICNTMI 382
                ML     P   T++S   A +       LL G+  H Y LR G E    I NT++
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLV 239

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY K GK                               + S++ +     GRD ++WNT
Sbjct: 240 AMYGKMGK-------------------------------LASSKVLLGSFEGRDLVTWNT 268

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           +L  L Q   F EA+E  R M+ E ++ D  T+  V  AC +L  L   K ++AY  KNG
Sbjct: 269 VLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNG 328

Query: 503 -IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +  +  + +ALVDM+  C       +VF  M  R +  W A I   A     E+A+ LF
Sbjct: 329 SLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLF 388

Query: 562 NEMLRQ-GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG------- 613
            EM    G+  +S    GV+ AC   G        F     IHG    +V  G       
Sbjct: 389 IEMEESAGLLANSTTMAGVVPACVRSG-------AFSKKEAIHGF---VVKRGLDRDRFV 438

Query: 614 --CMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAA---CQKHQN 656
              ++D+  R G +  A  +   M  E  D++ W +++      ++H++
Sbjct: 439 QNALMDMYSRLGKIDIAKRIFGKM--EDRDLVTWNTIITGYVFSERHED 485



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 172/337 (51%), Gaps = 30/337 (8%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV----CTCAQMGTFESLTYAQKA 89
           P+   L+  +T  EL   H + LK G   + S++   +    C C Q+            
Sbjct: 306 PACSHLEMLRTGKEL---HAYALKNGSLDENSFVGSALVDMYCNCKQV--LSGCRVFDGM 360

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNAC 148
           FD  I          ++N++I GY+      EA+ L++E+    G+L +  T   V+ AC
Sbjct: 361 FDRKIG---------LWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPAC 411

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
            +S AF +   +HG +VK G DRD FV+N L++ Y   G I   +R+F +M +R++V+W 
Sbjct: 412 VRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWN 471

Query: 209 SLICACARRDLPKEAVYLFFEM-----------VEEGIKPNSVTMVCVISACAKLQNLEL 257
           ++I      +  ++A+ +  +M               +KPNS+T++ ++ +CA L  L  
Sbjct: 472 TIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAK 531

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G  + AY  +  +  +  + +ALVDMY KCG +  ++++F +   RN++  N I+  Y  
Sbjct: 532 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGM 591

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            G +++A+ +L  M++ G +P+ VT +S  +A +  G
Sbjct: 592 HGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSG 628


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/673 (37%), Positives = 386/673 (57%), Gaps = 12/673 (1%)

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
           +F  N ++  Y +   +     +FD M ER+VVSW  ++ A ++    +EA+ +  +M  
Sbjct: 224 MFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 283

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
           +G++ +S T    ++ACA+L +L  G ++ A +       +  + +ALV++Y K G    
Sbjct: 284 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKE 343

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           AK +F    DRN V    ++S +++ G   E++ + ++M       D+  + + +S    
Sbjct: 344 AKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCS 403

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
             DL  GR  H   L++G      + N++I MY KC   + A  IF  M+ K +VSW S+
Sbjct: 404 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSM 463

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVD 471
           I    + G+V  ARE F  M  ++ I+WN MLG   Q    E+ + +++VMLSE  ++ D
Sbjct: 464 ITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPD 523

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
            VT V +   C  LGA  L   I     K G+  D  +A A++ M+++CG    A +VF 
Sbjct: 524 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFD 583

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            +  +D+ +W A I   +  G G+QA+E+F+++L++G KPD I +V VL+ CSH GLV +
Sbjct: 584 FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQE 643

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
           G   F  M   H +SP + H+ CMVDLLGRAG L EA DLI  MP++P   +WG+LL+AC
Sbjct: 644 GKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSAC 703

Query: 652 QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
           + H N ++A  AA+ + ELD   SG ++L++ IYA AGK  + A++R  M+++GI+K PG
Sbjct: 704 KIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPG 763

Query: 712 SSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
            S +EV+ KVH F + D SHP++  I   L E+  ++   GYV          D    + 
Sbjct: 764 YSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR--------TDSTRSEI 815

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
              HHSEKLA+AFGL++    MPI ++KNLR+C DCH+  KL+S V  RE ++RD  RFH
Sbjct: 816 ---HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFH 872

Query: 832 FFRQGSCSCSDFW 844
            F  GSCSC D+W
Sbjct: 873 HFNGGSCSCGDYW 885



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 128/536 (23%), Positives = 229/536 (42%), Gaps = 99/536 (18%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV----- 195
           F   L +C    A      +HG +V +G    VF++N L++ Y  CG + D RR+     
Sbjct: 27  FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86

Query: 196 ---------------------------FDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
                                      F  M  R+V SW +L+    +      ++  F 
Sbjct: 87  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146

Query: 229 EMVEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            M   G   PN+ T+ C + +C  L    L  ++ A + +   + ++ +  ALVDM+++C
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRL----------------------------- 318
           GAVD A +LF   K+  +   N++++ YV+                              
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266

Query: 319 --GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
             G  REAL ++ +M   G R D  T  S+++A A+L  L  G+  H  V+RN       
Sbjct: 267 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + + ++++Y K G  + A  +F+ + ++  V+W  LI+G ++ G                
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYG---------------- 370

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                           F E++ELF  M +E + +D+  +  + S C     L L + +++
Sbjct: 371 ---------------CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHS 415

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
              K+G    + ++ +L+ M+A+C + Q A  +FR M ++D+ +WT+ I A +  GN  +
Sbjct: 416 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAK 475

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           A E F+ M  + +    I +  +L A    G    G  +++ M     V P  V Y
Sbjct: 476 AREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTY 527



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 188/389 (48%), Gaps = 9/389 (2%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N +  N +++ Y K G +  A +LFG    R++   NT+MS Y +   +R+ L  L+  L
Sbjct: 90  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQ---SRQYLVSLETFL 146

Query: 333 -LH---GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +H      P+  T+  A+ +   LG           V +   +    +   ++DM+++C
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G  ++A R+F  +   T+   NS++AG +K   V+ A E+F  MP RD +SWN M+  L+
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           Q     EA+++   M S+ +++D  T     +AC  L +L   K ++A + +N  H D  
Sbjct: 267 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +A+ALV+++A+ G  + A  VF  +  R+  AWT  I      G   ++VELFN+M  + 
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 386

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           +  D      +++ C     +  G  L  S+    G    +V    ++ +  +   L  A
Sbjct: 387 MTLDQFALATLISGCCSRMDLCLGRQL-HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 445

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
             + + M  E + V W S++ A  +  NV
Sbjct: 446 EAIFRFMN-EKDIVSWTSMITAYSQVGNV 473



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 215/505 (42%), Gaps = 72/505 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N ++   S  G   EA+ + V++   G+  D  T+   L AC + S+   G Q+H  ++
Sbjct: 258 WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 317

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +     D +V + L+  Y + G   + + VF+ + +RN V+WT LI    +     E+V 
Sbjct: 318 RNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVE 377

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF +M  E +  +   +  +IS C    +L LG ++ +   + G     ++ N+L+ MY 
Sbjct: 378 LFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 437

Query: 286 KC-------------------------------GAVDTAKQLFGECKDRNLVLCNTIMSN 314
           KC                               G V  A++ F    ++N++  N ++  
Sbjct: 438 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGA 497

Query: 315 YVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
           Y++ G   + L +   ML     RPD VT ++     A LG    G    G  ++ GL  
Sbjct: 498 YIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLII 557

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
             S+ N +I MY KCG+   A ++FD ++ K +VSWN++I G  ++G  + A E+F ++ 
Sbjct: 558 DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 617

Query: 434 GR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
            R    D+IS+  +L G +   + +E    F +M                          
Sbjct: 618 KRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMK------------------------- 652

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAM 548
                      + I   ++  + +VD+  R G    A  +   M  K     W A + A 
Sbjct: 653 ---------RAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSAC 703

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDS 573
            + GN E A EL  + + +   PDS
Sbjct: 704 KIHGNNELA-ELAAKHVFELDSPDS 727


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/724 (33%), Positives = 401/724 (55%), Gaps = 32/724 (4%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           EA+ L+  +    I  ++F F  +++A         G  +H  + K GF+ D+ + N  +
Sbjct: 73  EAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFV 132

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
             Y +   + +G + F  M   N+ S  +L+      +   +   +  +++ EG +PN  
Sbjct: 133 TMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMY 192

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T + ++  CA   +L  G  +   + + G+  ++ + N+LV++Y KCG+ + A ++FGE 
Sbjct: 193 TFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI 252

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            +R++V    +++ +V  G     L I ++ML  G  P+  T +S + + + L D+  G+
Sbjct: 253 PERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 311

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H  +++N L+G D +   ++DMY K                               N 
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAK-------------------------------NR 340

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
            +E A  +F+ +  RD  +W  ++ G  Q+   E+A++ F  M  E +K +  T+    S
Sbjct: 341 FLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLS 400

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
            C  +  LD  + +++   K G   DM +A+ALVDM+A+CG  + A  VF  +  RD  +
Sbjct: 401 GCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVS 460

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W   I   +  G G +A++ F  ML +G  PD + F+GVL+ACSH GL+ +G   F S++
Sbjct: 461 WNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLS 520

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
            I+G++P I HY CMVD+LGRAG   E    I+ M +  N +IW ++L AC+ H N++  
Sbjct: 521 KIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFG 580

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
             AA ++ EL+PE    ++LLSN++A+ G W +V  VR  M  +G++K PG S +EVNG+
Sbjct: 581 ERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQ 640

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           VH F S D SHP++  I   L++++ +L   GY P+  +VL +V ++EK+ LL +HSE+L
Sbjct: 641 VHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERL 700

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+AF L+STS    IR+ KNLR+C DCH F K +S++ ++E++VRD N FH F+ GSCSC
Sbjct: 701 ALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSC 760

Query: 841 SDFW 844
            +FW
Sbjct: 761 QNFW 764



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 235/491 (47%), Gaps = 34/491 (6%)

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K G   D  + + L+N Y +C  +   R+V +EM  ++V  W   + +       +EA
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           V LF+ M    I+ N      +ISA A L +   G+ + A + + G +++ L+ NA V M
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           YMK  +V+   Q F      NL   N ++S +       +   IL ++L+ G  P+  T 
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S +   A  GDL  G+  HG V+++G+     + N+++++Y KCG    AC++F  +  
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           + VVSW +LI G +  G                                +   + +F  M
Sbjct: 255 RDVVSWTALITGFVAEG--------------------------------YGSGLRIFNQM 282

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
           L+E    +  T + +  +C  L  +DL K ++A I KN +  +  + TALVDM+A+    
Sbjct: 283 LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFL 342

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           + A  +F R+ KRD+ AWT  +   A +G GE+AV+ F +M R+G+KP+       L+ C
Sbjct: 343 EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGC 402

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           S    ++ G  L  SM    G S  +     +VD+  + G + +A +++    V  + V 
Sbjct: 403 SRIATLDSGRQL-HSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVS 460

Query: 644 WGSLLAACQKH 654
           W +++    +H
Sbjct: 461 WNTIICGYSQH 471



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 143/289 (49%), Gaps = 13/289 (4%)

Query: 29  TPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
            P     I  L++C +L+++   KQ H  I+K  L       + +V   A+    E    
Sbjct: 288 NPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLED--- 344

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+  F+  IK +     LF +  ++ GY+  G G +A+  ++++   G+ P++FT    L
Sbjct: 345 AETIFNRLIKRD-----LFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSL 399

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           + C++ +    G Q+H   +K G   D+FV + L++ Y +CG + D   VFD +  R+ V
Sbjct: 400 SGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 459

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW ++IC  ++     +A+  F  M++EG  P+ VT + V+SAC+ +  +E G +    +
Sbjct: 460 SWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSL 519

Query: 266 DEL-GMKANALMVNALVDMYMKCGAVDTAKQLFGECK-DRNLVLCNTIM 312
            ++ G+         +VD+  + G     +    E K   N+++  T++
Sbjct: 520 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVL 568



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
           L K I+  I KNGI  D  L ++LV+++ +C   Q A QV   M  +DV  W   + +  
Sbjct: 8   LKKIIFRVI-KNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSAN 66

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
                ++AV+LF  M    I+ +  +F  +++A +  G
Sbjct: 67  SPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLG 104


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/743 (36%), Positives = 403/743 (54%), Gaps = 63/743 (8%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+++ GY+  G   +A+S +  +      PD F++  +L+A   SS+  +        V
Sbjct: 141 YNTMLAGYAANGRLPQALSFFRSIP----RPDSFSYNTLLHALGVSSSLAD--------V 188

Query: 166 KMGFD----RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           +  FD    +D    N +I+ +   G +   R  FD   E++ VSW  ++ A  R    +
Sbjct: 189 RALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQ 248

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA  LF    E                                        +A+  NAL+
Sbjct: 249 EARELFDSRTE---------------------------------------WDAISWNALM 269

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
             Y++   ++ A+++F +   R++V  NT++S Y R G   EA  + D      P  D  
Sbjct: 270 AGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDV----APIRDVF 325

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T  + VS  AQ G L   +     +       W    N M+  Y++    E A  +FD M
Sbjct: 326 TWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSW----NAMMAAYVQRRMMEEAKELFDAM 381

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             + V SWN+++ G  + G ++ AR +F  MP +D +SW  ML   +Q    EE ++LF+
Sbjct: 382 PCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFK 441

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M      V+R     V S C  + AL+    +++ + K G      +  AL+ M+ +CG
Sbjct: 442 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCG 501

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             + A   F  ME+RDV +W   I   A  G G++A+E+F+ M +   KPD I  VGVL 
Sbjct: 502 SMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLA 561

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV +G   F SM    GV+ +  HY CM+DLLGRAG L EA++L+K MP EP+ 
Sbjct: 562 ACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDS 621

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            +WG+LL A + H+N ++   AAE+I EL+PE +G++VLLSNIYAS+GKW +V ++R  M
Sbjct: 622 TMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIM 681

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            E+G++K+PG S IEV  KVH F+ GD  HPE  +I + L +++ R++ AGYV     VL
Sbjct: 682 HERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVL 741

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            DV+E+EK+++L +HSEKLA+A+G++      PIRV+KNLR+C DCH+  K +S +  R 
Sbjct: 742 HDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRL 801

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           II+RD+NRFH FR GSCSC D+W
Sbjct: 802 IILRDSNRFHHFRDGSCSCGDYW 824



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 196/461 (42%), Gaps = 95/461 (20%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N  +  +M+ G V  A++LF     R+    NT+++ Y   G   +AL+    +    PR
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI----PR 166

Query: 338 PDRV---TMLSAVSASAQLGD------------------LLCGRMCHGYV--LRNGLE-- 372
           PD     T+L A+  S+ L D                  ++     HG V   R+  +  
Sbjct: 167 PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLA 226

Query: 373 -GWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
              D++  N M+  Y++ G+ + A  +FD  +    +SWN+L+AG ++   +E A+++F+
Sbjct: 227 PEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFN 286

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
           +MP RD +SWNTM+ G  +     EA  LF V        D  T   + S     G L+ 
Sbjct: 287 KMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIR----DVFTWTAIVSGYAQNGMLEE 342

Query: 491 AKWIY-AYIEKNGIHCD-----------MQLATALVDM---------------FARCGDP 523
           AK ++ A  +KN +  +           M+ A  L D                +A+ G  
Sbjct: 343 AKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGML 402

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A  +F  M ++D  +W A + A +  G  E+ ++LF EM R G   +   F  VL+ C
Sbjct: 403 DEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTC 462

Query: 584 S-----------HGGLVNQGWHL------------FR--SMTDIHGVSPQ-----IVHYG 613
           +           H  L+  G+ +            F+  SM + H    +     +V + 
Sbjct: 463 ADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWN 522

Query: 614 CMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAAC 651
            M+    R G   EAL++  +M     +P+D+    +LAAC
Sbjct: 523 TMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAAC 563



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 166/356 (46%), Gaps = 34/356 (9%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQV 160
           +F + +++ GY+  G+  EA  +      F  +PDK   ++  ++ A  +     E  ++
Sbjct: 324 VFTWTAIVSGYAQNGMLEEAKRV------FDAMPDKNAVSWNAMMAAYVQRRMMEEAKEL 377

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
             A+      R+V   N ++  Y + G + + R +F  M +++ VSW +++ A ++    
Sbjct: 378 FDAMPC----RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFS 433

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           +E + LF EM   G   N     CV+S CA +  LE G ++ + + + G      + NAL
Sbjct: 434 EETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNAL 493

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           + MY KCG+++ A   F E ++R++V  NT+++ Y R G  +EAL + D M     +PD 
Sbjct: 494 LAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDD 553

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +T++  ++A +  G +  G + + Y +    G+         MID+  + G+ + A    
Sbjct: 554 ITLVGVLAACSHSGLVEKG-ISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAV--- 609

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                            L+K+   E    ++  + G   I  N+ LG    E +FE
Sbjct: 610 ----------------NLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFE 649



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 135/324 (41%), Gaps = 41/324 (12%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  I  +M+ G+   A R+F  M  ++  ++N+++AG   NG +  A   F  +P  D  
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSF 170

Query: 439 SWNTMLGGLTQENMFEEAMELFRVM-----LSERIKVDRVTMVGVASACGYLGAL----D 489
           S+NT+L  L   +   +   LF  M     +S  + +      G+ S   +   L    D
Sbjct: 171 SYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKD 230

Query: 490 LAKW---IYAYIEKNGIHCDMQL-----------ATALVDMFARCGDPQRAMQVFRRMEK 535
              W   + AY+    I    +L             AL+  + +    + A ++F +M +
Sbjct: 231 AVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQ 290

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP--DSIVFVGVLTACSHGGLVNQGW 593
           RDV +W   +   A  G+  +A  LF+      + P  D   +  +++  +  G++ +  
Sbjct: 291 RDVVSWNTMVSGYARRGDMAEARRLFD------VAPIRDVFTWTAIVSGYAQNGMLEEAK 344

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
            +F +M D + VS     +  M+    +  ++ EA +L  +MP   N   W ++L    +
Sbjct: 345 RVFDAMPDKNAVS-----WNAMMAAYVQRRMMEEAKELFDAMPCR-NVASWNTMLTGYAQ 398

Query: 654 HQNVDIAAYAAERITELDPEKSGV 677
              +D     A  I  + P+K  V
Sbjct: 399 AGMLD----EARAIFGMMPQKDAV 418



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 47/275 (17%)

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF----- 460
           V+  N  I   ++ G V  A  +F+ MP R   ++NTML G        +A+  F     
Sbjct: 107 VIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR 166

Query: 461 ----------------------RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                                 R +  E    D V+   + S+    G + LA+  +   
Sbjct: 167 PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLA 226

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            EK+ +  +  LA      + R G  Q A ++F    + D  +W A +         E+A
Sbjct: 227 PEKDAVSWNGMLAA-----YVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEA 281

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP--QIVHYGCM 615
            ++FN+M ++    D + +  +++  +  G + +   LF        V+P   +  +  +
Sbjct: 282 QKMFNKMPQR----DVVSWNTMVSGYARRGDMAEARRLF-------DVAPIRDVFTWTAI 330

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           V    + G+L EA  +  +MP + N V W +++AA
Sbjct: 331 VSGYAQNGMLEEAKRVFDAMP-DKNAVSWNAMMAA 364


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 389/670 (58%), Gaps = 4/670 (0%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           LI      GD    R++FD + + +  + ++LI A     L  EA+ ++  + E GIKP+
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
               +    ACA   +      V       G+ ++  + NAL+  Y KC  V+ A+++F 
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           +   R++V   ++ S YV+ G  R+ + +  EM   G +P+ +T+ S + A A+L DL  
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G+  HG+ +R+G+     +C+ ++ +Y KC     A  +FD M ++ VVSWN ++    K
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 257

Query: 419 NGDVESAREVFSEMPG----RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           N + E    +F +M       D  +WN ++GG  +    EEA+E+FR M     K + +T
Sbjct: 258 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 317

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +  +  AC +   L + K I+ Y+ ++    D+   TAL+ M+A+CGD   +  VF  M 
Sbjct: 318 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 377

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           ++DV AW   I A AM GNG++A+ LF++ML   ++P+S+ F GVL+ CSH  LV +G  
Sbjct: 378 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 437

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +F SM   H V P   HY C+VD+  RAG L EA   I+ MP+EP    WG+LLAAC+ +
Sbjct: 438 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVY 497

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +NV++A  +A+++ E++P   G +V L NI  +A  W+  ++VR+ MKE+GI K PG S 
Sbjct: 498 KNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSW 557

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           ++V  KVH F  GD+S+ E + I + L E+  +++ AGY PD   VL D+D++EK   L 
Sbjct: 558 LQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLC 617

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEKLA+AFG+++ +    IRV KNLR+C DCH+  K +SKV    I+VRD+ RFH F+
Sbjct: 618 NHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFK 677

Query: 835 QGSCSCSDFW 844
            G+CSC D W
Sbjct: 678 NGNCSCKDLW 687



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 240/532 (45%), Gaps = 77/532 (14%)

Query: 64  PSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEA 122
           PS++  +++     +G F     A++ FD   + + T+ +     +LI   +  GL  EA
Sbjct: 11  PSHLGLRLIRVALNVGDFNR---ARQLFDNIPQPDPTTCS-----TLISALTTHGLSNEA 62

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           I +Y  L   GI PD   F     AC  S       +VH    + G   DVFV N LI+ 
Sbjct: 63  IKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHA 122

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           YG+C  +   RRVFD++  R+VVSWTSL     +   P++ + +F EM   G+KPN +T+
Sbjct: 123 YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTV 182

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
             ++ ACA+L++L+ G  +  +    GM  N  + +ALV +Y KC +V  A+ +F     
Sbjct: 183 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 242

Query: 303 RNLVLCNTIMSNYVR-----------------------------------LGLAREALAI 327
           R++V  N +++ Y +                                    G + EA+ +
Sbjct: 243 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 302

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             +M   G +P+ +T+ S + A +   +L  G+  H YV R+   G  +    ++ MY K
Sbjct: 303 FRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAK 362

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG   ++  +FD M  K VV+WN++I                           N M G  
Sbjct: 363 CGDLNLSRNVFDMMRRKDVVAWNTMIIA-------------------------NAMHGN- 396

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCD 506
                 +EA+ LF  ML  R++ + VT  GV S C +   ++    I+  + ++  +  D
Sbjct: 397 -----GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPD 451

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
               + +VD+++R G    A +  + M  +   SAW A + A  +  N E A
Sbjct: 452 ANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELA 503



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 195/434 (44%), Gaps = 70/434 (16%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD  +  +  S T     SL   Y   G   + + ++ E+   G+ P+  T   +L
Sbjct: 132 ARRVFDDLVVRDVVSWT-----SLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSIL 186

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC +      G ++HG  V+ G   ++FV + L++ Y +C  + + R VFD M  R+VV
Sbjct: 187 PACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVV 246

Query: 206 SWTSLICA-----------------------------------CARRDLPKEAVYLFFEM 230
           SW  ++ A                                   C      +EAV +F +M
Sbjct: 247 SWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM 306

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
            + G KPN +T+  ++ AC+  +NL +G  +  Y+       +     AL+ MY KCG +
Sbjct: 307 QKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDL 366

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           + ++ +F   + +++V  NT++      G  +EAL + D+MLL   +P+ VT    +S  
Sbjct: 367 NLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGC 426

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSI------------CNTMIDMYMKCGKQEMACRIF 398
           +           H  ++  G++ ++S+             + ++D+Y + G+   A +  
Sbjct: 427 S-----------HSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFI 475

Query: 399 DHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLGGLTQENMF 453
             M    T  +W +L+A      +VE    SA+++F E+   +  ++ ++   L    M+
Sbjct: 476 QGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF-EIEPNNPGNYVSLFNILVTAKMW 534

Query: 454 EEAMELFRVMLSER 467
            EA ++ R+++ ER
Sbjct: 535 SEASQV-RILMKER 547



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            L   L+ +    GD  RA Q+F  + + D +  +  I A+   G   +A+++++ +  +
Sbjct: 13  HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 72

Query: 568 GIKPDSIVFVGVLTACSHGG 587
           GIKPD  VF+    AC+  G
Sbjct: 73  GIKPDMPVFLAAAKACAVSG 92


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/757 (35%), Positives = 390/757 (51%), Gaps = 104/757 (13%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  VL  C    +  +G +VH  I       D  +   L++FY  CGD+ +GRRVFD M
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI---KPNSV---------------- 240
            ++NV  W  ++   A+    KE++ LF  MVE+GI   +P S                 
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220

Query: 241 --------------------------------TMVCVISACAKLQNLELGDRVCAYIDEL 268
                                           T++ V+  CA    L LG  V +   + 
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
             +      N L+DMY KCG +D A ++F +  +RN+V   ++++ Y R G +  A+ +L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILL 340

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +M   G + D V + S + A A+ G L  G+  H Y+  N +     +CN ++DMY KC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKC 400

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G                                +E A  VFS M  +D ISWNTM+G L 
Sbjct: 401 G-------------------------------SMEGANSVFSTMVVKDIISWNTMVGEL- 428

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
                               K D  TM  +  AC  L AL+  K I+ YI +NG   D  
Sbjct: 429 --------------------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRH 468

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +A ALVD++ +CG    A  +F  +  +D+ +WT  I    M G G +A+  FNEM   G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           I+PD + F+ +L ACSH GL+ QGW  F  M +   + P++ HY CMVDLL R G L +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
              I+++P+ P+  IWG+LL  C+ + ++++A   AER+ EL+PE +G +VLL+NIYA A
Sbjct: 589 YKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEA 648

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG-DESHPEMNNISSMLREMNCR 747
            K   V R+R ++ ++G+RK PG S IE+ G+V+ F SG + SHP    I S+L++M  +
Sbjct: 649 EKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRK 708

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +++ GY P     L++ DE +K+  L  HSEKLAMAFGL++      IRV KNLR+C DC
Sbjct: 709 MKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDC 768

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H  AK +SK   REI++RD+NRFH F+ G CSC  FW
Sbjct: 769 HEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 209/443 (47%), Gaps = 56/443 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS+I GY   GL    + +Y ++   GI  D  T   VL  C  S     G  VH   +
Sbjct: 219 WNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  F+R +   N L++ Y +CGD+    RVF++M ERNVVSWTS+I    R      A+ 
Sbjct: 279 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAII 338

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L  +M +EG+K + V +  ++ ACA+  +L+ G  V  YI    M +N  + NAL+DMY 
Sbjct: 339 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYA 398

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG+++ A  +F     ++++  NT++                        +PD  TM  
Sbjct: 399 KCGSMEGANSVFSTMVVKDIISWNTMVGEL---------------------KPDSRTMAC 437

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A A L  L  G+  HGY+LRNG      + N ++D+Y+KCG   +A  +FD + +K 
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +VSW  +IAG   +G    A   F+EM  RD                             
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEM--RD----------------------------- 526

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA--TALVDMFARCGDP 523
             I+ D V+ + +  AC + G L+   W + YI KN  + + +L     +VD+ +R G+ 
Sbjct: 527 AGIEPDEVSFISILYACSHSGLLEQG-WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNL 585

Query: 524 QRAMQVFRRME-KRDVSAWTAAI 545
            +A +    +    D + W A +
Sbjct: 586 SKAYKFIETLPIAPDATIWGALL 608



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 17/252 (6%)

Query: 57  KQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCI 116
           K+G+      I+ ++  CA+ G+ ++     K    YIK N  ++ LF+ N+L+  Y+  
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDN----GKDVHDYIKANNMASNLFVCNALMDMYAKC 400

Query: 117 GLGVEAISLYVELAGFGIL----------PDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           G    A S++  +    I+          PD  T   +L AC   SA   G ++HG I++
Sbjct: 401 GSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILR 460

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G+  D  V N L++ Y +CG +   R +FD +  +++VSWT +I          EA+  
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIAT 520

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI--DELGMKANALMVNALVDMY 284
           F EM + GI+P+ V+ + ++ AC+    LE G R   YI  ++  ++        +VD+ 
Sbjct: 521 FNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-FYIMKNDFNIEPKLEHYACMVDLL 579

Query: 285 MKCGAVDTAKQL 296
            + G +  A + 
Sbjct: 580 SRTGNLSKAYKF 591



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 22/190 (11%)

Query: 430 SEMPGR--DH--ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           S  P R  DH    +N  +    Q    E AMEL  V + ++ +++  T   V   C  L
Sbjct: 55  SATPTRTIDHQVTDYNAKILHFCQLGDLENAMEL--VCMCQKSELETKTYGSVLQLCAGL 112

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
            +L   K +++ I+ N +  D  L   LV  +A CGD +   +VF  MEK++V  W   +
Sbjct: 113 KSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMV 172

Query: 546 GAMAMEGNGEQAVELFNEMLRQGI---KPDS-------------IVFVGVLTACSHGGLV 589
              A  G+ ++++ LF  M+ +GI   +P+S             I +  +++     GL 
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLT 232

Query: 590 NQGWHLFRSM 599
            +G  +++ M
Sbjct: 233 ERGLGIYKQM 242



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 28/247 (11%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           L  C +L+ L   K+ H +IL+ G     H  + +  +   C  +G       A+  FD 
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL------ARLLFDM 492

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
                  S  L  +  +I GY   G G EAI+ + E+   GI PD+ +F  +L AC+ S 
Sbjct: 493 I-----PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ERNVVSWTS 209
              +G +    I+K  F+ +  +E+  C+++     G++    +  + +    +   W +
Sbjct: 548 LLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 606

Query: 210 LICACARR---DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           L+C C      +L ++     FE+  E    N+   V + +  A+ +  E   R+   I 
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFELEPE----NTGYYVLLANIYAEAEKREEVKRMREKIG 662

Query: 267 ELGMKAN 273
           + G++ N
Sbjct: 663 KKGLRKN 669


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/675 (36%), Positives = 393/675 (58%), Gaps = 17/675 (2%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           DRD+   N +++ Y + G++   R +F++M E++VVSW +++   A+    +EA  +F +
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M    +  N ++   ++SA  +   +E   R+     +  M    +  N L+  Y++   
Sbjct: 179 M----LVKNEISWNGLLSAYVQNGRIEDARRLF----DSKMDWEIVSWNCLMGGYVRKKR 230

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A+ LF     R+ +  N +++ Y + GL  EA  + +E+    P  D     + VS 
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PIRDVFAWTAMVSG 286

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
             Q G L         +       W    N MI  Y++  + E A  +FD M ++   SW
Sbjct: 287 FVQNGMLDEATRIFEEMPEKNEVSW----NAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N+++ G  + G+++ A+ +F EMP RD ISW  M+ G  Q    EEA+ LF  M  +   
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           ++R  +    S+C  + AL+L K ++  + K G         AL+ M+ +CG  + A  V
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + ++D+ +W   I   A  G G++A+ LF E ++  IKPD +  VGVL+ACSH GLV
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGLV 521

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++G   F SM   +G++    HY CM+DLLGRAG L EAL+L+KSMP  P+   WG+LL 
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           A + H + ++   AAE++ E++P+ SG++VLLSN+YA++G+W  V  +R +M+++G++K+
Sbjct: 582 ASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKV 641

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S +E+  K H FT GD SHPE   I + L E++  L+  G+V     VL DV+E+EK
Sbjct: 642 PGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEK 701

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +++L +HSEKLA+AFG++S     PIRV+KNLR+C DCH+  K +SK+  R+IIVRD+NR
Sbjct: 702 EHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNR 761

Query: 830 FHFFRQGSCSCSDFW 844
           FH F +GSCSC D+W
Sbjct: 762 FHHFSEGSCSCGDYW 776



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 110/195 (56%), Gaps = 8/195 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + ++I GY+  G   EA+ L++++   G + ++      L++C + +A   G Q+HG +V
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K GF       N L+  YG+CG I +   VF++++E+++VSW ++I   AR    KEA+ 
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA 492

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----GMKANALMVNALV 281
           L FE ++  IKP+ VT+V V+SAC+   +  L D+   Y + +    G+ ANA     ++
Sbjct: 493 L-FESMKMTIKPDDVTLVGVLSACS---HTGLVDKGMEYFNSMYQNYGITANAKHYTCMI 548

Query: 282 DMYMKCGAVDTAKQL 296
           D+  + G +D A  L
Sbjct: 549 DLLGRAGRLDEALNL 563



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 155/327 (47%), Gaps = 21/327 (6%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N MI  Y+   K + A ++F+ M ++ ++SWN +++G +KNG++ +AR +F++MP +D +
Sbjct: 95  NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN ML G  Q    EEA ++F  ML +    + ++  G+ SA    G ++ A+ ++   
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLF--- 207

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
             + +  ++     L+  + R      A  +F RM  RD  +W   I   A  G   +A 
Sbjct: 208 -DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
            LF E+  +    D   +  +++     G++++   +F  M + + VS     +  M+  
Sbjct: 267 RLFEELPIR----DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-----WNAMIAG 317

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
             ++  + +A +L   MP   N   W +++    +  N+D A    + + + D       
Sbjct: 318 YVQSQQIEKARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQG 705
           +   + YA +G+      + ++MK  G
Sbjct: 377 I---SGYAQSGQSEEALHLFIKMKRDG 400



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 134/283 (47%), Gaps = 20/283 (7%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  I  YM+ G+ E A  +F+ M  ++ V++N++I+G + N   + AR+VF +MP RD I
Sbjct: 64  NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLI 123

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AY 497
           SWN ML G  +      A  LF  M  +    D V+   + S     G ++ A+ I+   
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNGFVEEARKIFDQM 179

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           + KN I  +      L+  + + G  + A ++F      ++ +W   +G    +   + A
Sbjct: 180 LVKNEISWN-----GLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
             LF+ M  +    D I +  ++T  +  GL+++   LF  +         +  +  MV 
Sbjct: 235 RSLFDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEELP-----IRDVFAWTAMVS 285

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
              + G+L EA  + + MP E N+V W +++A   + Q ++ A
Sbjct: 286 GFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAGYVQSQQIEKA 327



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 49/245 (20%)

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +V WN  I+  ++ G  ESA  VF+ M  R  +++N M+ G    N F+ A ++F  M  
Sbjct: 60  IVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM-- 117

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
                DR                DL  W                   ++  + + G+   
Sbjct: 118 ----PDR----------------DLISW-----------------NVMLSGYVKNGNLSA 140

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A  +F +M ++DV +W A +   A  G  E+A ++F++ML +    + I + G+L+A   
Sbjct: 141 ARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQ 196

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G +     LF S  D      +IV + C++    R   L +A  L   MPV  + + W 
Sbjct: 197 NGRIEDARRLFDSKMDW-----EIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWN 250

Query: 646 SLLAA 650
            ++  
Sbjct: 251 IMITG 255



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 26/220 (11%)

Query: 38  SLKNCKTLNEL---KQPHCHILKQGLGHKPSYIS--KVVCTCAQMGTFESLTYAQKAFDY 92
           +L +C  +  L   KQ H  ++K G   +  YI+   ++    + G+ E      +AFD 
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGF--QTGYIAGNALLAMYGKCGSIE------EAFDV 462

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           +  ++ T   +  +N++I GY+  G G EA++L+ E     I PD  T   VL+AC+ + 
Sbjct: 463 F--EDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTG 519

Query: 153 AFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSL 210
              +G++   ++ +  G   +     C+I+  G  G + +   +   M    +  +W +L
Sbjct: 520 LVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGAL 579

Query: 211 ICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
           + A       +L ++A    FEM     +P++  M  ++S
Sbjct: 580 LGASRIHGDTELGEKAAEKVFEM-----EPDNSGMYVLLS 614


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/796 (33%), Positives = 423/796 (53%), Gaps = 67/796 (8%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           KQ H  +LKQG   +    + +V   ++ G   +L+ A++ F    + +  S     YNS
Sbjct: 271 KQLHGLVLKQGFSSETYVCNALVTLYSRSG---NLSSAEQIFHCMSQRDRVS-----YNS 322

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI G +  G    A++L+ ++      PD  T   +L+AC    A   G Q H   +K G
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 382

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
              D+ VE  L++ Y +C DI      F              +C     +L K +  +F 
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFF--------------LCYGQLDNLNK-SFQIFT 427

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M  EGI PN  T   ++  C  L   +LG+++   + + G + N  + + L+DMY K G
Sbjct: 428 QMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHG 487

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +D A ++F   K+ ++V    +++ Y +     EAL +  EM   G + D +   SA+S
Sbjct: 488 KLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAIS 547

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A A +  L  GR  H     +G     SI N ++ +Y +CGK                  
Sbjct: 548 ACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGK------------------ 589

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
                        V  A   F ++  +D++SWN+++ G  Q   FEEA+ +F  M    +
Sbjct: 590 -------------VREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGL 636

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           +++  T     SA   +  + + K I+  I K G   + +++ AL+ ++A+CG       
Sbjct: 637 EINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTID---- 692

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
                   D+S W + I   +  G G +A++LF +M +  + P+ + FVGVL+ACSH GL
Sbjct: 693 --------DIS-WNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGL 743

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V++G   FRSM++ H + P+  HY C+VDLLGR+GLL  A   ++ MP++P+ ++W +LL
Sbjct: 744 VDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLL 803

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           +AC  H+N+DI  +AA  + EL+P+ S  +VL+SN+YA +GKW    R R  MK++G++K
Sbjct: 804 SACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKK 863

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG S +EV+  VH F +GD++HP  + I   LR ++ R  + GYVP   ++L D + ++
Sbjct: 864 EPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQ 923

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K      HSE+LA+AFGL+S + + P+ V KNLR+C DCH++ K VSK+ DR IIVRD+ 
Sbjct: 924 KDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSY 983

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F+ GSCSC D+W
Sbjct: 984 RFHHFKVGSCSCKDYW 999



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 276/604 (45%), Gaps = 92/604 (15%)

Query: 80  FESLTY-AQKAFDYYIKDNETSATLFMYNSL-----------IRGYSCIGLGVEAISLYV 127
           FES T+      D Y K+   S+   ++ +L           I G S  G   EA+ L+ 
Sbjct: 195 FESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFC 254

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           ++              VL+ACTK   F  G Q+HG ++K GF  + +V N L+  Y   G
Sbjct: 255 QI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSG 300

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
           ++    ++F  MS+R+ VS+ SLI   A++     A+ LF +M  +  KP+ VT+  ++S
Sbjct: 301 NLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLS 360

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           ACA +  L  G +  +Y  + GM ++ ++  +L+D+Y+KC  + TA + F         L
Sbjct: 361 ACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------L 411

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
           C      Y +L    ++  I  +M + G  P++ T  S +     LG    G   H  VL
Sbjct: 412 C------YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVL 465

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           + G +    + + +IDMY K GK + A +IF  +    VVSW ++IA             
Sbjct: 466 KTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIA------------- 512

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                             G TQ + F EA+ LF+ M  + IK D +      SAC  + A
Sbjct: 513 ------------------GYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQA 554

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           LD  + I+A    +G   D+ +  ALV ++ARCG  + A   F ++  +D  +W + +  
Sbjct: 555 LDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSG 614

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGW--- 593
            A  G  E+A+ +F +M + G++ +S  F   ++A +           HG +   G+   
Sbjct: 615 FAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSE 674

Query: 594 -HLFRSMTDIHGVSPQI--VHYGCMVDLLGRAGLLGEALDL---IKSMPVEPNDVIWGSL 647
             +  ++  ++     I  + +  M+    + G   EAL L   +K + V PN V +  +
Sbjct: 675 TEVSNALITLYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGV 734

Query: 648 LAAC 651
           L+AC
Sbjct: 735 LSAC 738



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/498 (22%), Positives = 200/498 (40%), Gaps = 86/498 (17%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M + G++ NS T + ++  C       L  R  ++ D  G+K        L+D Y+  G 
Sbjct: 72  MEQHGVRANSQTFLWLLEGC-------LNSR--SFYD--GLK--------LIDFYLAFGD 112

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD-RVTMLSAVS 348
           ++ A  +F E   R+L   N I + ++   L      +   ML      D R+  +    
Sbjct: 113 LNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRG 172

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
            S            H   + +G E    ICN +ID+Y K G    A ++F+++  +  VS
Sbjct: 173 CSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVS 232

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W ++I+GL +NG  E A  +F ++                                    
Sbjct: 233 WVAMISGLSQNGYEEEAMLLFCQI------------------------------------ 256

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
                    V SAC  +   +  K ++  + K G   +  +  ALV +++R G+   A Q
Sbjct: 257 ---------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQ 307

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F  M +RD  ++ + I  +A +G   +A+ LF +M     KPD +    +L+AC+  G 
Sbjct: 308 IFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGA 367

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDL----------------LGRAGLLGEALDLI 632
           +  G   F S     G++  IV  G ++DL                 G+   L ++  + 
Sbjct: 368 LPNGKQ-FHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIF 426

Query: 633 KSMPVE---PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE-KSGVHVLLSNIYASA 688
             M +E   PN   + S+L  C      D+      ++ +   +    V  +L ++YA  
Sbjct: 427 TQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKH 486

Query: 689 GKWTNVARVRLQMKEQGI 706
           GK  +  ++  ++KE  +
Sbjct: 487 GKLDHALKIFRRLKENDV 504


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/616 (39%), Positives = 359/616 (58%), Gaps = 40/616 (6%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+   + P+  +   ++ +CA     +LG+     I ++G + + ++   L+D Y K G 
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +  AK++F     R++V  N ++S   + G   EA  + D M                  
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM------------------ 102

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                             RN    W    N+MI  Y K G    A  +FD    K VVSW
Sbjct: 103 ----------------TERNSCS-W----NSMITCYCKLGDINSARLMFDCNPVKDVVSW 141

Query: 410 NSLIAGLIKNGDVESAREVFSEM-PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           N++I G  K+  + +A+E+F  M   R+ ++WNTM+    Q   F  A+ +F+ M SE +
Sbjct: 142 NAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENV 201

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           K   VTMV + SAC +LGALD+ +WI+ YI    +  D+ L  AL+DM+ +CG  + A+ 
Sbjct: 202 KPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAID 261

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           VF  + ++++  W + I  + M G GE+A+  F  M ++GIKPD + FVG+L+ CSH GL
Sbjct: 262 VFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGL 321

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           ++ G   F  M  ++G+ P + HYGCMVDLLGRAG L EAL+LI++MP++PN ++ GSLL
Sbjct: 322 LSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLL 381

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
            ACQ H++  +     +++ ELDP   G +V LSN+YAS  +W +V   R  M ++G+ K
Sbjct: 382 RACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHK 441

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG SSIEVN  VHEF +GD SHP+   I++ L E+   L+  G+VP+  NVL D++E+E
Sbjct: 442 TPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEE 501

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K+  + +HSE++A+AFGL+ST     IRVVKNLR C DCHS  KL+S  + REIIVRD  
Sbjct: 502 KEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRK 561

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH FR GSCSC+D+W
Sbjct: 562 RFHHFRNGSCSCNDYW 577



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 193/406 (47%), Gaps = 49/406 (12%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +LP K +F  +L +C  S     G   H  I+KMGF+ D+ ++  L++FY + GD+   +
Sbjct: 6   VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           RVF  M  R+VV+  ++I A ++    +EA  LF  M E     NS +   +I+   KL 
Sbjct: 66  RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLG 121

Query: 254 NLELGDRV--CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF---GECKDRNLVLC 308
           ++     +  C  + ++      +  NA++D Y K   +  A++LF   G    RN V  
Sbjct: 122 DINSARLMFDCNPVKDV------VSWNAIIDGYCKSKQLVAAQELFLLMGSA--RNSVTW 173

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           NT++S YV+ G    A+++  +M     +P  VTM+S +SA A LG L  G   HGY+  
Sbjct: 174 NTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRT 233

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
             L+    + N +IDMY KCG  E A  +F  +S K +  WNS+I GL  NG        
Sbjct: 234 KRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGR------- 286

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
                                    EEA+  F VM  E IK D VT VG+ S C + G L
Sbjct: 287 ------------------------GEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLL 322

Query: 489 DLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
               ++    +   G+   ++    +VD+  R G  + A+++ R M
Sbjct: 323 SAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAM 368



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 14/251 (5%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEM-SERNVVSWTSLICACARRDLPKEAVYLFFE 229
           +DV   N +I+ Y +   +V  + +F  M S RN V+W ++I A  +      A+ +F +
Sbjct: 136 KDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQ 195

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M  E +KP  VTMV ++SACA L  L++G+ +  YI    +K + ++ NAL+DMY KCGA
Sbjct: 196 MQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGA 255

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           ++ A  +F     +N+   N+I+      G   EA+A    M   G +PD VT +  +S 
Sbjct: 256 LEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSG 315

Query: 350 SAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            +  G L  G+     M   Y L  G+E +      M+D+  + G  + A  +   M  K
Sbjct: 316 CSHSGLLSAGQRYFSEMLGVYGLEPGVEHY----GCMVDLLGRAGYLKEALELIRAMPMK 371

Query: 405 TVVSWNSLIAG 415
                NS++ G
Sbjct: 372 P----NSMVLG 378



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 7/196 (3%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I  Y   G    AIS++ ++    + P + T   +L+AC    A   G  +HG I 
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
                 DV + N LI+ Y +CG +     VF  +S +N+  W S+I         +EA+ 
Sbjct: 233 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIA 292

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----GMKANALMVNALV 281
            F  M +EGIKP+ VT V ++S C+    L  G R   Y  E+    G++        +V
Sbjct: 293 AFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQR---YFSEMLGVYGLEPGVEHYGCMV 349

Query: 282 DMYMKCGAVDTAKQLF 297
           D+  + G +  A +L 
Sbjct: 350 DLLGRAGYLKEALELI 365



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 35/171 (20%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           +   +F +NS+I G    G G EAI+ ++ +   GI PD  TF  +L+ C+ S     G 
Sbjct: 267 SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQ 326

Query: 159 QVHGAIVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           +    ++ + G +  V    C+++  G  G +                            
Sbjct: 327 RYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYL---------------------------- 358

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
              KEA+ L   M    +KPNS+ +  ++ AC   ++ +LG++V   + EL
Sbjct: 359 ---KEALELIRAM---PMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLEL 403


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/674 (36%), Positives = 388/674 (57%), Gaps = 16/674 (2%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           +D+F  N ++  Y     + D R +FD M E++VVSW +++    R     EA  +F  M
Sbjct: 93  KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM 152

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
             +    NS++   +++A  +   LE   R+     E       +  N L+  Y+K   +
Sbjct: 153 PHK----NSISWNGLLAAYVRSGRLEEARRLF----ESKSDWELISCNCLMGGYVKRNML 204

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
             A+QLF +   R+L+  NT++S Y + G   +A  + +E     P  D  T  + V A 
Sbjct: 205 GDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE----SPVRDVFTWTAMVYAY 260

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
            Q G L   R     V     +  +   N MI  Y +  + +M   +F+ M    + SWN
Sbjct: 261 VQDGMLDEARR----VFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWN 316

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
            +I+G  +NGD+  AR +F  MP RD +SW  ++ G  Q  ++EEAM +   M  +   +
Sbjct: 317 IMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESL 376

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           +R T     SAC  + AL+L K ++  + + G      +  ALV M+ +CG    A  VF
Sbjct: 377 NRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVF 436

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           + ++ +D+ +W   +   A  G G QA+ +F  M+  G+KPD I  VGVL+ACSH GL +
Sbjct: 437 QGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTD 496

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G   F SM   +G++P   HY CM+DLLGRAG L EA +LI++MP EP+   WG+LL A
Sbjct: 497 RGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGA 556

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
            + H N+++   AAE + +++P  SG++VLLSN+YA++G+W +V+++RL+M++ G++K P
Sbjct: 557 SRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTP 616

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G S +EV  K+H FT GD  HPE   I + L E++ +++  GYV     VL DV+E+EKK
Sbjct: 617 GYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKK 676

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
           ++L +HSEKLA+AFG+++     PIRV+KNLR+C DCH+  K +SK+  R IIVRD++R+
Sbjct: 677 HMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRY 736

Query: 831 HFFRQGSCSCSDFW 844
           H F +G CSC D+W
Sbjct: 737 HHFSEGICSCRDYW 750



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 197/451 (43%), Gaps = 63/451 (13%)

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T+ C  +    ++N      +C + D + ++ N++  NA++  Y++      A+ LF + 
Sbjct: 33  TVKCTKAISTHMRNGHCDLALCVF-DAMPLR-NSVSYNAMISGYLRNAKFSLARDLFDKM 90

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT---MLSAVSASAQLGDL- 356
             ++L   N +++ Y R    R+A  + D M    P  D V+   MLS    S  + +  
Sbjct: 91  PHKDLFSWNLMLTGYARNRRLRDARMLFDSM----PEKDVVSWNAMLSGYVRSGHVDEAR 146

Query: 357 -LCGRMCH-----------GYVLRNGLE----------GWDSI-CNTMIDMYMKCGKQEM 393
            +  RM H            YV    LE           W+ I CN ++  Y+K      
Sbjct: 147 DVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGD 206

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++FD +  + ++SWN++I+G  ++GD+  AR +F E P RD  +W  M+    Q+ M 
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGML 266

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           +EA  +F  M  +R     V + G A        +D+ + ++  +    I         +
Sbjct: 267 DEARRVFDEMPQKREMSYNVMIAGYAQ----YKRMDMGRELFEEMPFPNIGS----WNIM 318

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +  + + GD  +A  +F  M +RD  +W A I   A  G  E+A+ +  EM R G   + 
Sbjct: 319 ISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNR 378

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG---------CMVDLLGRAGL 624
             F   L+AC+    +  G         +HG   Q+V  G          +V +  + G 
Sbjct: 379 STFCCALSACADIAALELG-------KQVHG---QVVRTGYEKGCLVGNALVGMYCKCGC 428

Query: 625 LGEALDLIKSMPVEPNDVI-WGSLLAACQKH 654
           + EA D+ +   V+  D++ W ++LA   +H
Sbjct: 429 IDEAYDVFQG--VQHKDIVSWNTMLAGYARH 457



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 12/218 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+  FD   + +  S     + ++I GY+  GL  EA+++ VE+   G   ++ TF 
Sbjct: 328 LAQARNLFDMMPQRDSVS-----WAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFC 382

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
             L+AC   +A   G QVHG +V+ G+++   V N L+  Y +CG I +   VF  +  +
Sbjct: 383 CALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHK 442

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           ++VSW +++   AR    ++A+ +F  M+  G+KP+ +TMV V+SAC+   +  L DR  
Sbjct: 443 DIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACS---HTGLTDRGT 499

Query: 263 AYIDEL----GMKANALMVNALVDMYMKCGAVDTAKQL 296
            Y   +    G+  N+     ++D+  + G ++ A+ L
Sbjct: 500 EYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNL 537



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 56/288 (19%)

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
           H  +   V     I+  ++NG  + A  VF  MP R+ +S+N M+ G  +   F  A +L
Sbjct: 27  HFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDL 86

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M  +                      DL  W                   ++  +AR
Sbjct: 87  FDKMPHK----------------------DLFSW-----------------NLMLTGYAR 107

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
               + A  +F  M ++DV +W A +      G+ ++A ++F+ M  +    +SI + G+
Sbjct: 108 NRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGL 163

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L A    G + +   LF S +D      +++   C++    +  +LG+A  L   +PV  
Sbjct: 164 LAAYVRSGRLEEARRLFESKSDW-----ELISCNCLMGGYVKRNMLGDARQLFDQIPVR- 217

Query: 640 NDVI-WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYA 686
            D+I W ++++     Q+ D++   A R+ E  P +  V    + +YA
Sbjct: 218 -DLISWNTMISGYA--QDGDLS--QARRLFEESPVRD-VFTWTAMVYA 259


>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
 gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/514 (43%), Positives = 334/514 (64%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M L    PD  T    + A  +L D++ G+  HG   + G      + N ++++Y  CG+
Sbjct: 1   MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  +F+ M  +  V+WN +IA L K GD++ A   F  MP ++  SW +M+ G  Q 
Sbjct: 61  MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
               EA++LF  +  E ++ + VT+V V +AC  LG LDL + ++ Y  K+G   ++ + 
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
             L+DM+ +CG  + A +VF  ME+R V +W+A I  +AM G  E+A+ LF+EM++ G+K
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           P+ + F+G+L ACSH GL+++G   F SMT  +GV PQI HYGC+VDL  RAGLL EA +
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            I SMP++PN V+WG+LL  C+ H+N+D+A  A + ++ELDP   G +V++SNIYA A +
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAER 360

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W + ARVR  MK++G++K  G SSI VNG VHEF +GD++HP+  +I  +  ++  +++ 
Sbjct: 361 WEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKR 420

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            GY P  + VLLD++E+EK+  L  HSEKLA+ FGL++T +  PIR++KNLR+C DCH+ 
Sbjct: 421 RGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAA 480

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K++S +  REIIVRD NRFH FR G CSC DFW
Sbjct: 481 LKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 41/345 (11%)

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
           F +LPD FT  FVL AC K S    G  +HG   K+GF  ++F++N ++N YG CG++ D
Sbjct: 4   FDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGD 63

Query: 192 GRRVFDEMSER-------------------------------NVVSWTSLICACARRDLP 220
              +F++M +R                               NV SWTS+I    +   P
Sbjct: 64  AMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKP 123

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
            EA+ LF ++ +E ++PN VT+V V++ACA L +L+LG  V  Y  + G K N  + N L
Sbjct: 124 NEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTL 183

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           +DMY+KCG ++ A+++F E ++R +V  + +++     G A EAL +  EM+  G +P+ 
Sbjct: 184 IDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243

Query: 341 VTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           VT +  + A + +G +  GR     M   Y +   +E +  +    +D++ + G  E A 
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCV----VDLFSRAGLLEEAH 299

Query: 396 RIFDHMSNK-TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
                M  K   V W +L+ G   + +++ A E    +   D ++
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLN 344



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 1/192 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + S+I G+   G   EAI L+++L    + P++ T   VL AC        G  VH    
Sbjct: 110 WTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYST 169

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K GF R+V V N LI+ Y +CG + + RRVF EM ER VVSW+++I   A     +EA+ 
Sbjct: 170 KSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALC 229

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID-ELGMKANALMVNALVDMY 284
           LF EM++ G+KPN VT + ++ AC+ +  ++ G R  A +  + G+         +VD++
Sbjct: 230 LFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLF 289

Query: 285 MKCGAVDTAKQL 296
            + G ++ A + 
Sbjct: 290 SRAGLLEEAHEF 301



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 26/269 (9%)

Query: 30  PKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P +   +  L  C  L +L   +  H +  K G        + ++    + G  E+   A
Sbjct: 140 PNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLEN---A 196

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ F Y +++     T+  ++++I G +  G   EA+ L+ E+   G+ P+  TF  +L+
Sbjct: 197 RRVF-YEMEER----TVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLH 251

Query: 147 ACTKSSAFGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NV 204
           AC+      EG +   ++    G    +    C+++ +   G + +       M  + N 
Sbjct: 252 ACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNG 311

Query: 205 VSWTSLICACARR---DLPKEAVYLFFEMVEEGIKP-NSVTMVCVISACAKLQNLELGDR 260
           V W +L+  C      DL +EA+    E+      P N    V + +  A+ +  E   R
Sbjct: 312 VVWGALLGGCKVHKNIDLAEEAIKHLSEL-----DPLNDGYYVVISNIYAEAERWEDAAR 366

Query: 261 VCAYIDELGMKA----NALMVNALVDMYM 285
           V   + + G+K     +++ VN +V  ++
Sbjct: 367 VRKLMKDRGVKKTSGWSSITVNGVVHEFV 395


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 282/915 (30%), Positives = 455/915 (49%), Gaps = 86/915 (9%)

Query: 6   NPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQ-GLGHKP 64
           +PS + L T     +++     ++PK SP    L   +TLN +++ H  ++K    G+  
Sbjct: 7   SPSSVSLGTSETQIVSSPQF--SSPKFSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLV 64

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV-EAI 123
           +    ++    + G FES   A K F      N       ++NS +  ++  G    E +
Sbjct: 65  TMDGSMMRNYLEFGDFES---ATKVFFVGFARN-----YLLWNSFLEEFASFGGDSHEIL 116

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
            ++ EL   G+  D      VL  C        G++VH  ++K GF  DV +   LIN Y
Sbjct: 117 EVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLY 176

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            +C  I    +VFDE   +    W +++ A  R +  ++A+ L   M     K    T+V
Sbjct: 177 EKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIV 236

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
            ++ AC KL+ L  G ++  Y+   G  +N  + N++V MY +   ++ A+ +F   +D 
Sbjct: 237 KLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDH 296

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEM-------------------LLHGP-------- 336
           NL   N+I+S+Y   G    A  +  EM                   LL G         
Sbjct: 297 NLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNI 356

Query: 337 --------RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
                   +PD  ++ SA+ A  +LG    G+  HGY++R+ LE    +C +++DMY+K 
Sbjct: 357 RSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKN 416

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR------------- 435
              E A  +F H  NK + +WNSLI+G    G  ++A ++  +M                
Sbjct: 417 DCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLV 476

Query: 436 --------------------------DHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                                     + +SW  M+ G  Q   + +A++ F  M  E +K
Sbjct: 477 SGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVK 536

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +  T+  +  AC     L   + I+ +  K+G   D+ +ATAL+DM+++ G  + A +V
Sbjct: 537 PNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEV 596

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           FR ++++ +  W   +   A+ G+GE+   LF+ M + GI+PD+I F  +L+ C + GLV
Sbjct: 597 FRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLV 656

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
             GW  F SM   + ++P I HY CMVDLLG+AG L EALD I +MP + +  IWG++LA
Sbjct: 657 MDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLA 716

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC+ H+++ IA  AA  +  L+P  S  +VL+ NIY++  +W +V R++  M   G++  
Sbjct: 717 ACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIP 776

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
              S I+V   +H F++  +SHPE   I   L ++   ++  GYVPD   V  ++D+ EK
Sbjct: 777 NVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEK 836

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + +L  H+EKLAM +GL+      PIRVVKN R+C DCH+ AK +S   +REI +RD  R
Sbjct: 837 EKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGR 896

Query: 830 FHFFRQGSCSCSDFW 844
           FH F  G CSC+D W
Sbjct: 897 FHHFMNGECSCNDRW 911


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/654 (38%), Positives = 386/654 (59%), Gaps = 20/654 (3%)

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R +FD+M ER+VVSW +++   A+    KEA  +F EM  +    NS++   +++A  + 
Sbjct: 50  RLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQN 105

Query: 253 QNLELGDRVCAYIDELGMKANALMV--NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
             +E   R+         KA+  ++  N ++  Y+K   +  A+ +F    +R+ V  NT
Sbjct: 106 GRIEDARRL------FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNT 159

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++S Y + G   EA  + +E     P  D  T  + VS   Q G L   R     +    
Sbjct: 160 MISGYAQNGELLEAQRLFEE----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN 215

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
              W    N +I  Y++C + + A  +F+ M  + V SWN++I G  +NGD+  AR  F 
Sbjct: 216 SVSW----NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFD 271

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
            MP RD ISW  ++ G  Q    EEA+ LF  M  +  +++R T     S C  + AL+L
Sbjct: 272 RMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALEL 331

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            K ++  + K G+     +  AL+ M+ +CG+   A  VF  +E+++V +W   I   A 
Sbjct: 332 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 391

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G G++A+ LF  M + GI PD +  VGVL+ACSH GLV++G   F SMT  +G++    
Sbjct: 392 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSK 451

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           HY CM+DLLGRAG L +A +L+K+MP EP+   WG+LL A + H N ++   AA+ I E+
Sbjct: 452 HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 511

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           +P+ SG++VLLSN+YA++G+W +V R+RL+M+++G++K+PG S +EV  K+H FT GD  
Sbjct: 512 EPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSV 571

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           HPE + I + L E++ +++  GYV     VL DV+E+EK ++L +HSEKLA+AFG+++  
Sbjct: 572 HPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIP 631

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              PIRV+KNLR+C DCH+  K +SK+  R II+RD++RFH F  G CSC D+W
Sbjct: 632 AGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 224/504 (44%), Gaps = 88/504 (17%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+++ GY+  G   EA  ++ E+       +  ++  +L A  ++    +  +    + 
Sbjct: 64  WNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLAAYVQNGRIEDARR----LF 115

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +   D ++   NC++  Y +   +VD R +FD M ER+ VSW ++I   A+     EA  
Sbjct: 116 ESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQR 175

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF    EE    +  T   ++S   +   L+   RV   + E     N++  NA++  Y+
Sbjct: 176 LF----EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPE----KNSVSWNAIIAGYV 227

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNT-------------------------------IMSN 314
           +C  +D A++LF     +N+   NT                               I++ 
Sbjct: 228 QCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAG 287

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y + G   EAL +  EM   G R +R T  S +S  A++  L  G+  HG V++ GLE  
Sbjct: 288 YAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESG 347

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N ++ MY KCG  + A  +F+ +  K VVSWN++IAG  ++G              
Sbjct: 348 CYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG-------------- 393

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KW 493
                              +EA+ LF  M    I  D VTMVGV SAC + G +D   ++
Sbjct: 394 -----------------FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 436

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEG 552
            Y+  +  GI  + +  T ++D+  R G    A  + + M  + D + W A +GA  + G
Sbjct: 437 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 496

Query: 553 N---GEQAVELFNEMLRQGIKPDS 573
           N   GE+A ++  EM     +PD+
Sbjct: 497 NTELGEKAAKMIFEM-----EPDN 515



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 180/384 (46%), Gaps = 42/384 (10%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+  FD   + +E S     +N++I GY+  G  +EA  L+ E      + D FT+ 
Sbjct: 139 LVDARGIFDRMPERDEVS-----WNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWT 189

Query: 143 FVLNACTKSSAFGEGVQVH-----------GAIV-------KMGFDRDVFVE-------- 176
            +++   ++    E  +V             AI+       +M   R++F          
Sbjct: 190 AMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS 249

Query: 177 -NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI 235
            N +I  Y + GDI   R  FD M +R+ +SW ++I   A+    +EA++LF EM  +G 
Sbjct: 250 WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE 309

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           + N  T    +S CA++  LELG +V   + + G+++   + NAL+ MY KCG +D A  
Sbjct: 310 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 369

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F   +++ +V  NT+++ Y R G  +EAL + + M   G  PD VTM+  +SA +  G 
Sbjct: 370 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 429

Query: 356 LLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLI 413
           +  G    +      G+         MID+  + G+ + A  +  +M       +W +L+
Sbjct: 430 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489

Query: 414 AGLIKNGDVE----SAREVFSEMP 433
                +G+ E    +A+ +F   P
Sbjct: 490 GASRIHGNTELGEKAAKMIFEMEP 513



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 132/298 (44%), Gaps = 27/298 (9%)

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           + G ++  ++ +AR +F +MP RD +SWN ML G  Q    +EA E+F  M  +    + 
Sbjct: 37  LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NS 92

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT--ALVDMFARCGDPQRAMQVF 530
           ++  G+ +A    G ++ A+ ++          D +L +   ++  + +      A  +F
Sbjct: 93  ISWNGMLAAYVQNGRIEDARRLFES------KADWELISWNCMMGGYVKRNRLVDARGIF 146

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
            RM +RD  +W   I   A  G   +A  LF E   +    D   +  +++     G+++
Sbjct: 147 DRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYVQNGMLD 202

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +   +F  M + + VS   +  G +     +   + +A +L ++MP + N   W +++  
Sbjct: 203 EARRVFDGMPEKNSVSWNAIIAGYV-----QCKRMDQARELFEAMPCQ-NVSSWNTMITG 256

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVH-VLLSNIYASAGKWTNVARVRLQMKEQGIR 707
               QN DIA   A    +  P++  +    +   YA +G       + ++MK  G R
Sbjct: 257 YA--QNGDIA--QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 310


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 276/830 (33%), Positives = 430/830 (51%), Gaps = 69/830 (8%)

Query: 18  TTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQM 77
           TT  +QH A +T K+ P     K   +L  L   H                      A  
Sbjct: 19  TTYASQHLAASTSKEPPPRVRPKRGPSLKSLVLSH----------------------AAA 56

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
           G       A +          +S   F++N +IRG++  GL   A++ Y  +   G  PD
Sbjct: 57  GRMHDALAAVR----------SSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPD 106

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVF 196
           +FTFP V+  C +  A  EG   H A +++G    +V+  N L+ FY + G + D  RVF
Sbjct: 107 RFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVF 166

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAKLQN 254
           D M  R++V+W S++       L   A+  F EM  EG  ++ + V ++  ++AC     
Sbjct: 167 DGMPVRDIVTWNSMVDGYVSNGLGALALDCFREM-HEGLQVQHDGVGIIAALAACCLDSA 225

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G  V AY+   G++ +  +  +L+DMY KCGA+ +A+ +F     R +V  N ++  
Sbjct: 226 LMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGG 285

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y   G   EA     +M   G + + VT ++ ++A AQ    L GR  HGYV R+     
Sbjct: 286 YALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPH 345

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             +   +++MY K GK + +  IF  M+NKT+VSWN++IA  +                 
Sbjct: 346 VVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYM----------------- 388

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
                          + M+ EA+ LF  +L++ +  D  TM  V  A   LG L   + +
Sbjct: 389 --------------YKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQM 434

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           ++YI +     +  +  A++ M+ARCGD   + ++F +M  +DV +W   I   A+ G G
Sbjct: 435 HSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQG 494

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           + A+E+F+EM   G++P+   FV VLTACS  G+ ++GW  F  M   +G+ PQI HYGC
Sbjct: 495 KIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGC 554

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           M DLLGRAG L E L  I+S+P+ P   IWGSLL A +   ++DIA YAAERI EL+ + 
Sbjct: 555 MTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDN 614

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
           +G +V+LS++YA AG+W +V R+R  M E+G+R+    S +E++G    F +GD +HP+ 
Sbjct: 615 TGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQS 674

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
             I  +   ++ ++ +  Y  +L++ +       +  + + HS +LA+ FGLIS+    P
Sbjct: 675 KTIHEVSDVLSRKIGETDYPRNLSDPI--SLTSRRTIIPNKHSVRLAVVFGLISSEARAP 732

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           I V KN+R+C  CH   KL+SK   R I+V D N +H F  GSC C D+W
Sbjct: 733 ILVKKNVRICNHCHHALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGDYW 782


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/675 (36%), Positives = 392/675 (58%), Gaps = 17/675 (2%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           DRD+   N +++ Y + G++   R +F++M E++VVSW +++   A+    +EA  +F +
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M    +  N ++   ++SA  +   +E   R+     +  M    +  N L+  Y++   
Sbjct: 179 M----LVKNEISWNGLLSAYVQNGRIEDARRLF----DSKMDWEIVSWNCLMGGYVRKKR 230

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A+ LF     R+ +  N +++ Y + GL  EA  + +E+    P  D     + VS 
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PIRDVFAWTAMVSG 286

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
             Q G L         +       W    N MI  Y++  + E A  +FD M ++   SW
Sbjct: 287 FVQNGMLDEATRIFEEMPEKNEVSW----NAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N+++ G  + G+++ A+ +F EMP RD ISW  M+ G  Q    EEA+ LF  M  +   
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           ++R  +    S+C  + AL+L K ++  + K G         AL+ M+ +CG  + A  V
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + ++D+ +W   I   A  G G++A+ LF E ++  IKPD +  VGVL+ACSH G V
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGFV 521

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++G   F SM   +G++    HY CM+DLLGRAG L EAL+L+KSMP  P+   WG+LL 
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           A + H + ++   AAE++ E++P+ SG++VLLSN+YA++G+W  V  +R +M+++G++K+
Sbjct: 582 ASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKV 641

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S +E+  K H FT GD SHPE   I + L E++  L+  G+V     VL DV+E+EK
Sbjct: 642 PGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEK 701

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +++L +HSEKLA+AFG++S     PIRV+KNLR+C DCH+  K +SK+  R+IIVRD+NR
Sbjct: 702 EHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNR 761

Query: 830 FHFFRQGSCSCSDFW 844
           FH F +GSCSC D+W
Sbjct: 762 FHHFSEGSCSCGDYW 776



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 194/451 (43%), Gaps = 79/451 (17%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           + + +  NA++  Y+     D A+++F +  DR+L+  N ++S YV+ G    A A+ ++
Sbjct: 88  RRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQ 147

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M    P  D V+  + +S  AQ G +   R     +L      W    N ++  Y++ G+
Sbjct: 148 M----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISW----NGLLSAYVQNGR 199

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A R+FD   +  +VSWN L+ G ++   ++ AR +F  MP RD ISWN M+ G  Q 
Sbjct: 200 IEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL--GALDLAKWIYAYI-EKNGIHCDM 507
            +  EA  LF     E + + R      A   G++  G LD A  I+  + EKN +  + 
Sbjct: 260 GLLSEARRLF-----EELPI-RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNA 313

Query: 508 QLA--------------------------TALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
            +A                            +V  +A+CG+  +A  +F  M +RD  +W
Sbjct: 314 MIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISW 373

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVN 590
            A I   A  G  E+A+ LF +M R G   +       L++C+           HG LV 
Sbjct: 374 AAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433

Query: 591 QGWHL---------------------FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
            G+                       F    DI      IV +  M+    R G   EAL
Sbjct: 434 AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI--TEKDIVSWNTMIAGYARHGFGKEAL 491

Query: 630 DLIKSMP--VEPNDVIWGSLLAACQKHQNVD 658
            L +SM   ++P+DV    +L+AC     VD
Sbjct: 492 ALFESMKMTIKPDDVTLVGVLSACSHTGFVD 522



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 108/192 (56%), Gaps = 2/192 (1%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + ++I GY+  G   EA+ L++++   G + ++      L++C + +A   G Q+HG +V
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K GF       N L+  YG+CG I +   VF++++E+++VSW ++I   AR    KEA+ 
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA 492

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELG-DRVCAYIDELGMKANALMVNALVDMY 284
           L FE ++  IKP+ VT+V V+SAC+    ++ G +   +     G+ ANA     ++D+ 
Sbjct: 493 L-FESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLL 551

Query: 285 MKCGAVDTAKQL 296
            + G +D A  L
Sbjct: 552 GRAGRLDEALNL 563



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 155/327 (47%), Gaps = 21/327 (6%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N MI  Y+   K + A ++F+ M ++ ++SWN +++G +KNG++ +AR +F++MP +D +
Sbjct: 95  NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN ML G  Q    EEA ++F  ML +    + ++  G+ SA    G ++ A+ ++   
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLF--- 207

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
             + +  ++     L+  + R      A  +F RM  RD  +W   I   A  G   +A 
Sbjct: 208 -DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
            LF E+  +    D   +  +++     G++++   +F  M + + VS     +  M+  
Sbjct: 267 RLFEELPIR----DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-----WNAMIAG 317

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
             ++  + +A +L   MP   N   W +++    +  N+D A    + + + D       
Sbjct: 318 YVQSQQIEKARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQG 705
           +   + YA +G+      + ++MK  G
Sbjct: 377 I---SGYAQSGQSEEALHLFIKMKRDG 400



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 134/283 (47%), Gaps = 20/283 (7%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  I  YM+ G+ E A  +F+ M  ++ V++N++I+G + N   + AR+VF +MP RD I
Sbjct: 64  NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLI 123

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AY 497
           SWN ML G  +      A  LF  M  +    D V+   + S     G ++ A+ I+   
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNGFVEEARKIFDQM 179

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           + KN I  +      L+  + + G  + A ++F      ++ +W   +G    +   + A
Sbjct: 180 LVKNEISWN-----GLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
             LF+ M  +    D I +  ++T  +  GL+++   LF  +         +  +  MV 
Sbjct: 235 RSLFDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEELP-----IRDVFAWTAMVS 285

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
              + G+L EA  + + MP E N+V W +++A   + Q ++ A
Sbjct: 286 GFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAGYVQSQQIEKA 327



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 49/245 (20%)

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +V WN  I+  ++ G  ESA  VF+ M  R  +++N M+ G    N F+ A ++F  M  
Sbjct: 60  IVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM-- 117

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
                DR                DL  W                   ++  + + G+   
Sbjct: 118 ----PDR----------------DLISW-----------------NVMLSGYVKNGNLSA 140

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A  +F +M ++DV +W A +   A  G  E+A ++F++ML +    + I + G+L+A   
Sbjct: 141 ARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQ 196

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G +     LF S  D      +IV + C++    R   L +A  L   MPV  + + W 
Sbjct: 197 NGRIEDARRLFDSKMDW-----EIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWN 250

Query: 646 SLLAA 650
            ++  
Sbjct: 251 IMITG 255



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 26/220 (11%)

Query: 38  SLKNCKTLNEL---KQPHCHILKQGLGHKPSYIS--KVVCTCAQMGTFESLTYAQKAFDY 92
           +L +C  +  L   KQ H  ++K G   +  YI+   ++    + G+ E      +AFD 
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGF--QTGYIAGNALLAMYGKCGSIE------EAFDV 462

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           +  ++ T   +  +N++I GY+  G G EA++L+ E     I PD  T   VL+AC+ + 
Sbjct: 463 F--EDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTG 519

Query: 153 AFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSL 210
              +G++   ++ +  G   +     C+I+  G  G + +   +   M    +  +W +L
Sbjct: 520 FVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGAL 579

Query: 211 ICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
           + A       +L ++A    FEM     +P++  M  ++S
Sbjct: 580 LGASRIHGDTELGEKAAEKVFEM-----EPDNSGMYVLLS 614


>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 598

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/548 (41%), Positives = 349/548 (63%), Gaps = 6/548 (1%)

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHG--PRPDRV-TMLSAVSASAQL-GDLLC 358
           R+  L + ++  +   G  + AL +   ++  G  P P  + ++L +++ S  + G    
Sbjct: 51  RSAELHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRL 110

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKC-GKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
               H + +R GL G+  + N +I ++    G+   A  +    +     ++N+LI    
Sbjct: 111 ALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHA 170

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
           + G V  AR +F EMP R+ +SW+ M+ G  Q     EA+ +F  M ++ ++ D   +VG
Sbjct: 171 RAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVG 230

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
           V +AC  LGAL+  KW++ Y++ N I   + L TALVDM+A+CG+ Q  M+VF  M+ ++
Sbjct: 231 VLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKN 290

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           V AWT  I  +AM G G  ++ LF++M   G+KPD I F+G L AC+H GLV++G  LF 
Sbjct: 291 VLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFN 350

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           SM + +G+ P+I HYGCMVDLL R GLL EA D+++ MP++P+ +IWG+L+A C+ H+NV
Sbjct: 351 SMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNV 410

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           ++A Y  +   EL+P+KSG +VLL NIY+++G+  +   +R  M+E+G+ K PG S++E+
Sbjct: 411 ELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEI 470

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHH 776
            G +H+F  GD SHP + +I +   E++ R+R + GYVPD   VLLD++E+E +  LS H
Sbjct: 471 KGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEEEMESALSRH 530

Query: 777 SEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           SEKLA+AF LIST   MPIR+VKNLR+C DCH   KL+SKVY REIIVRD  RFH F+ G
Sbjct: 531 SEKLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKDG 590

Query: 837 SCSCSDFW 844
           +CSC D+W
Sbjct: 591 TCSCKDYW 598



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 46/367 (12%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG----VQV 160
           ++++LIR ++  G    A+ LY  L   G+ P   T P +L +   S A        + V
Sbjct: 55  LHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAV 114

Query: 161 HGAIVKMGFDRDVFVENCLINFYG--------------------------------ECGD 188
           H   V++G    + V N LI  +                                   G 
Sbjct: 115 HAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGR 174

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + D R +FDEM ERN VSW++++    +    +EA+ +F +M  +G++P+   +V V++A
Sbjct: 175 VADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAA 234

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA+L  LE G  V  Y+    ++    +  ALVDMY KCG V    ++F   KD+N++  
Sbjct: 235 CAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAW 294

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCH 363
            T++      G   ++L +  +M   G +PD +  + A+ A    G +  GR     M +
Sbjct: 295 TTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVN 354

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDV 422
            Y ++  +E +      M+D+  + G    A  + + M  K   + W +L+AG   + +V
Sbjct: 355 NYGIKPKIEHY----GCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNV 410

Query: 423 ESAREVF 429
           E A  V 
Sbjct: 411 ELAEYVI 417



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 35/302 (11%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +A   N L+  + + G V  A+ LF E  +RN V  + +++ YV+ G  REAL +  +M 
Sbjct: 158 DASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQ 217

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G RPD   ++  ++A AQLG L  G+  HGY+  N +     +   ++DMY KCG+ +
Sbjct: 218 AQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQ 277

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +   +F+ M +K V++W ++I GL               M GR                 
Sbjct: 278 LGMEVFEGMKDKNVLAWTTMIKGL--------------AMHGRG---------------- 307

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLAT 511
             +++ LF  M S  +K D +  +G   AC + G +D  + ++  +  N GI   ++   
Sbjct: 308 -SDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYG 366

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            +VD+ AR G    A  +  +M  K D   W A +       N E A  +    +   ++
Sbjct: 367 CMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIE--LE 424

Query: 571 PD 572
           PD
Sbjct: 425 PD 426



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 6/212 (2%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+  FD   + N  S     +++++ GY   G G EA+ ++ ++   G+ PD      VL
Sbjct: 178 ARSLFDEMPERNAVS-----WSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVL 232

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC +  A  +G  VHG +        VF+   L++ Y +CG++  G  VF+ M ++NV+
Sbjct: 233 AACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVL 292

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AY 264
           +WT++I   A      +++ LF +M   G+KP+ +  +  + AC     ++ G  +  + 
Sbjct: 293 AWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSM 352

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           ++  G+K        +VD+  + G +  A+ +
Sbjct: 353 VNNYGIKPKIEHYGCMVDLLARNGLLSEARDM 384


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/652 (36%), Positives = 381/652 (58%), Gaps = 33/652 (5%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQ 253
           VF    E +V++W S++ A    ++P+ A+  + EM+E     P+  T   ++  CA L 
Sbjct: 34  VFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
             ++G  +   + +  + ++  +   L++MY  CG + +A+ LF     RN V+  +++S
Sbjct: 94  EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y++     EAL +  +M   G  PD VTM + VSA A+L DL  G   H ++    ++ 
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKI 213

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + + +++MY KCG                               D+++AR+VF ++ 
Sbjct: 214 CAVLGSALVNMYAKCG-------------------------------DLKTARQVFDKLS 242

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFR-VMLSERIKVDRVTMVGVASACGYLGALDLAK 492
            +D  +W+ ++ G  + N   EA++LFR V     ++ + VT++ V SAC  LG L+  +
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
           W++ YI +      + L  +L+DMF++CGD   A ++F  M  +D+ +W + +   A+ G
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHG 362

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G +A+  F  M    ++PD I F+GVLTACSH GLV +G  LF  +  ++GV  +  HY
Sbjct: 363 LGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY 422

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GCMVDLL RAGLL EA + I+ MP++P+  IWGS+L AC+ + N+++   AA  + +L+P
Sbjct: 423 GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEP 482

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
              GV++LLSNIYA    W  V +VR  M E+GI+K PG SS+ ++   H F +GD SHP
Sbjct: 483 TNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHP 542

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           E+  IS MLR++  +L+ AGYV D + VLL++D+ +K+  +S HSEKLA+ +GL+ +   
Sbjct: 543 EIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIG 602

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             I ++KNLR+C DCH+  KLVSK+Y R+I +RD NRFH F+ GSCSC D+W
Sbjct: 603 GRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 164/507 (32%), Positives = 264/507 (52%), Gaps = 45/507 (8%)

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
           HKPS ++K++     MG+   + YA   F +          +  +NS++R +    +   
Sbjct: 9   HKPS-LNKLIAHVLSMGSL-GVGYAYSVFAH-----TRELDVLTWNSMLRAFVNSNMPRR 61

Query: 122 AISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           A+  Y E L     +PD+FTFP +L  C     F  G  +HG +VK     D+++E  L+
Sbjct: 62  ALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLL 121

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           N Y  CGD+   R +F+ M  RN V WTS+I    +   P EA+ L+ +M E+G  P+ V
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           TM  ++SACA+L++L +G ++ ++I E+ MK  A++ +ALV+MY KCG + TA+Q+F + 
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKL 241

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCG 359
            D+++   + ++  YV+   + EAL +  E+      RP+ VT+L+ +SA AQLGDL  G
Sbjct: 242 SDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R  H Y+ R       S+ N++IDM+ KCG  + A RIFD MS K ++SWNS++ G   +
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALH 361

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G                       LG         EA+  FR+M +  ++ D +T +GV 
Sbjct: 362 G-----------------------LG--------REALAQFRLMQTTDLQPDEITFIGVL 390

Query: 480 SACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRD 537
           +AC + G +   K ++  IE   G+    +    +VD+  R G    A +  R M  + D
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 538 VSAWTAAIGAMAMEGN---GEQAVELF 561
            + W + +GA  +  N   GE+A    
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARFL 477



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 408 SWNSLIAGLIKNGD--VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           S N LIA ++  G   V  A  VF+     D ++WN+ML      NM   A++ +  ML 
Sbjct: 12  SLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71

Query: 466 ERIKV-DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
               V DR T   +   C  L    + K ++  + K  +H D+ + T L++M+A CGD +
Sbjct: 72  RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A  +F RM  R+   WT+ I          +A+ L+ +M   G  PD +    +++AC+
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/729 (35%), Positives = 396/729 (54%), Gaps = 36/729 (4%)

Query: 121 EAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF--VE 176
           EA  L+ ++  +    LPD  TF  +L  C  +       QVH   VK+GFD + F  V 
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS 187

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N L+  Y E   +     +F+E+ E++ V++ +LI    +  L  E+++LF +M + G +
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+  T   V+ A   L +  LG ++ A     G   +A + N ++D Y K   V   + L
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F E  + + V  N ++S+Y +      +L    EM   G         + +S +A L  L
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             GR  H   L    +    + N+++DMY KC   EM                       
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKC---EM----------------------- 401

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
                 E A  +F  +P R  +SW  ++ G  Q+ +    ++LF  M    ++ D+ T  
Sbjct: 402 -----FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V  A     +L L K ++A+I ++G   ++   + LVDM+A+CG  + A+QVF  M  R
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           +  +W A I A A  G+GE A+  F +M+  G++PDS+  +GVLTACSH G V QG   F
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
           ++M+ I+G++P+  HY CM+DLLGR G   EA  L+  MP EP++++W S+L AC+ H+N
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKN 636

Query: 657 VDIAAYAAERITELDP-EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
             +A  AAE++  ++    +  +V +SNIYA+AG+W  V  V+  M+E+GI+K+P  S +
Sbjct: 637 QSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           EVN K+H F+S D++HP  + I   + E+   +   GY PD ++V+ DVDEQ K   L +
Sbjct: 697 EVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKY 756

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSE+LA+AF LIST +  PI V+KNLR C DCH+  KL+SK+  REI VRD +RFH F +
Sbjct: 757 HSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSE 816

Query: 836 GSCSCSDFW 844
           G CSC D+W
Sbjct: 817 GVCSCGDYW 825



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 230/473 (48%), Gaps = 44/473 (9%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+LI GY   GL  E+I L++++   G  P  FTF  VL A      F  G Q+H   V
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             GF RD  V N +++FY +   +++ R +FDEM E + VS+  +I + ++ D  + +++
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV--NALVDM 283
            F EM   G    +     ++S  A L +L++G ++  +   L   A++++   N+LVDM
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDM 395

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KC   + A+ +F     R  V    ++S YV+ GL    L +  +M     R D+ T 
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            + + ASA    LL G+  H +++R+G LE   S  + ++DMY KCG  + A ++F+ M 
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEMP 514

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           ++  VSWN+LI+    NGD E+A   F++                               
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAK------------------------------- 543

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDL-AKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           M+   ++ D V+++GV +AC + G ++   ++  A     GI    +    ++D+  R G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE-LFN-EMLRQG 568
               A ++   M  + D   W++ + A  +  N    E+A E LF+ E LR  
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDA 656



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 165/383 (43%), Gaps = 36/383 (9%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN +I  YS       ++  + E+   G     F F  +L+     S+   G Q+H   +
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
               D  + V N L++ Y +C    +   +F  + +R  VSWT+LI    ++ L    + 
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF +M    ++ +  T   V+ A A   +L LG ++ A+I   G   N    + LVDMY 
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG++  A Q+F E  DRN V  N ++S +   G    A+    +M+  G +PD V++L 
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY-MKCGKQEMACRIFDHMSNK 404
            ++A +  G            +  G E + +    M  +Y +   K+  AC         
Sbjct: 559 VLTACSHCG-----------FVEQGTEYFQA----MSPIYGITPKKKHYAC--------- 594

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGL---TQENMFEEAMELF 460
                  ++  L +NG    A ++  EMP   D I W+++L        +++ E A E  
Sbjct: 595 -------MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647

Query: 461 RVMLSERIKVDRVTMVGVASACG 483
             M   R     V+M  + +A G
Sbjct: 648 FSMEKLRDAAAYVSMSNIYAAAG 670



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 105/199 (52%), Gaps = 1/199 (0%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T   + +LI GY   GL    + L+ ++ G  +  D+ TF  VL A    ++   G Q+H
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             I++ G   +VF  + L++ Y +CG I D  +VF+EM +RN VSW +LI A A     +
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMVNAL 280
            A+  F +M+E G++P+SV+++ V++AC+    +E G      +  + G+         +
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595

Query: 281 VDMYMKCGAVDTAKQLFGE 299
           +D+  + G    A++L  E
Sbjct: 596 LDLLGRNGRFAEAEKLMDE 614



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 11/255 (4%)

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
            L  R     +++ G +      N +++  ++ G+   A +++D M +K  VS N++I+G
Sbjct: 29  FLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG 88

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML--SERIKVDRV 473
            +K GDV SAR++F  MP R  ++W  ++G   + + F+EA +LFR M   S     D V
Sbjct: 89  HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCD--MQLATALVDMFARCGDPQRAMQVFR 531
           T   +   C      +    ++A+  K G   +  + ++  L+  +        A  +F 
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            + ++D   +   I     +G   +++ LF +M + G +P    F GVL A         
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV------- 261

Query: 592 GWHLFRSMTDIHGVS 606
           G H F     +H +S
Sbjct: 262 GLHDFALGQQLHALS 276



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/389 (20%), Positives = 154/389 (39%), Gaps = 40/389 (10%)

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
           DE+  K N +  N ++  ++K G V +A+ LF    DR +V    +M  Y R     EA 
Sbjct: 72  DEMPHK-NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAF 130

Query: 326 AILDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG--WDSICNTM 381
            +  +M        PD VT  + +               H + ++ G +   + ++ N +
Sbjct: 131 KLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVL 190

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           +  Y +  + ++AC +F+ +  K  V++N+LI G  K+G                     
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDG--------------------- 229

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                     ++ E++ LF  M     +    T  GV  A   L    L + ++A     
Sbjct: 230 ----------LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G   D  +   ++D +++         +F  M + D  ++   I + +     E ++  F
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLG 620
            EM   G    +  F  +L+  ++   +  G  L      +   +  I+H G  +VD+  
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYA 397

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           +  +  EA  + KS+P +   V W +L++
Sbjct: 398 KCEMFEEAELIFKSLP-QRTTVSWTALIS 425


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/710 (35%), Positives = 387/710 (54%), Gaps = 77/710 (10%)

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI--------------VDGRR------V 195
           EG +V   + K    ++V++ N +++ Y + GD               ++G+R      +
Sbjct: 14  EGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASEL 69

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FD++ +R+V+SW S+I       L +  + ++ +M+  GI  +  T++ V+  CAK   L
Sbjct: 70  FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTL 129

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
            LG  V +   +   +      N L+DMY KCG +D A ++F +  +RN+V   ++++ Y
Sbjct: 130 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 189

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            R G +  A+ +L +M   G + D V + S + A A+ G L  G+  H Y+  N +    
Sbjct: 190 TRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL 249

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +CN ++DMY KCG                                +E A  VFS M  +
Sbjct: 250 FVCNALMDMYAKCG-------------------------------SMEGANSVFSTMVVK 278

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           D ISWNTM+G L                     K D  TM  +  AC  L AL+  K I+
Sbjct: 279 DIISWNTMVGEL---------------------KPDSRTMACILPACASLSALERGKEIH 317

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
            YI +NG   D  +A ALVD++ +CG    A  +F  +  +D+ +WT  I    M G G 
Sbjct: 318 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGN 377

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+  FNEM   GI+PD + F+ +L ACSH GL+ QGW  F  M +   + P++ HY CM
Sbjct: 378 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACM 437

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLL R G L +A   I+++P+ P+  IWG+LL  C+ + ++++A   AER+ EL+PE +
Sbjct: 438 VDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENT 497

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG-DESHPEM 734
           G +VLL+NIYA A KW  V R+R ++ ++G+RK PG S IE+ G+V+ F SG + SHP  
Sbjct: 498 GYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHS 557

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
             I S+L++M  ++++ GY P     L++ DE +K+  L  HSEKLAMAFGL++      
Sbjct: 558 KKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKT 617

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           IRV KNLR+C DCH  AK +SK   REI++RD+NRFH F+ G CSC  FW
Sbjct: 618 IRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 218/463 (47%), Gaps = 65/463 (14%)

Query: 95  KDNETSATLF---------MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           K +E+++ LF          +NS+I GY   GL    + +Y ++   GI  D  T   VL
Sbjct: 61  KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
             C KS     G  VH   +K  F+R +   N L++ Y +CGD+    RVF++M ERNVV
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SWTS+I    R      A+ L  +M +EG+K + V +  ++ ACA+  +L+ G  V  YI
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
               M +N  + NAL+DMY KCG+++ A  +F     ++++  NT++             
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL---------- 290

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
                      +PD  TM   + A A L  L  G+  HGY+LRNG      + N ++D+Y
Sbjct: 291 -----------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 339

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
           +KCG   +A  +FD + +K +VSW  +IAG   +G    A   F+EM  RD         
Sbjct: 340 VKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEM--RD--------- 388

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
                                 I+ D V+ + +  AC + G L+   W + YI KN  + 
Sbjct: 389 --------------------AGIEPDEVSFISILYACSHSGLLEQG-WRFFYIMKNDFNI 427

Query: 506 DMQLA--TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
           + +L     +VD+ +R G+  +A +    +    D + W A +
Sbjct: 428 EPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 14/214 (6%)

Query: 57  KQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCI 116
           K+G+      I+ ++  CA+ G+ ++     K    YIK N  ++ LF+ N+L+  Y+  
Sbjct: 207 KEGVKLDVVAITSILHACARSGSLDN----GKDVHDYIKANNMASNLFVCNALMDMYAKC 262

Query: 117 GLGVEAISLYVELAGFGIL----------PDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           G    A S++  +    I+          PD  T   +L AC   SA   G ++HG I++
Sbjct: 263 GSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILR 322

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G+  D  V N L++ Y +CG +   R +FD +  +++VSWT +I          EA+  
Sbjct: 323 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIAT 382

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           F EM + GI+P+ V+ + ++ AC+    LE G R
Sbjct: 383 FNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 28/247 (11%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           L  C +L+ L   K+ H +IL+ G     H  + +  +   C  +G       A+  FD 
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL------ARLLFDM 354

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
                  S  L  +  +I GY   G G EAI+ + E+   GI PD+ +F  +L AC+ S 
Sbjct: 355 I-----PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ERNVVSWTS 209
              +G +    I+K  F+ +  +E+  C+++     G++    +  + +    +   W +
Sbjct: 410 LLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 468

Query: 210 LICACARR---DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           L+C C      +L ++     FE+  E    N+   V + +  A+ +  E   R+   I 
Sbjct: 469 LLCGCRIYHDIELAEKVAERVFELEPE----NTGYYVLLANIYAEAEKWEEVKRMREKIG 524

Query: 267 ELGMKAN 273
           + G++ N
Sbjct: 525 KKGLRKN 531


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/592 (41%), Positives = 352/592 (59%), Gaps = 31/592 (5%)

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
           +NL    +V A I   G   N  + N L+ MY++ GA++ A++LF     R+    + I+
Sbjct: 64  RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIV 123

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
             Y ++G       +  E+L  G   D  +    + A   L DL CGR+ H   L+ GL+
Sbjct: 124 GGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLD 183

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               +C T++DMY +C                                 VE A ++F +M
Sbjct: 184 YGHFVCATLVDMYARCKV-------------------------------VEDAHQIFVKM 212

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             RD  +W  M+G L +  +  E++  F  M ++ I  D+V +V V  AC  LGA++ AK
Sbjct: 213 WKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAK 272

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I+AYI   G   D+ L TA++DM+A+CG  + A  +F RM+ R+V  W+A I A    G
Sbjct: 273 AIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHG 332

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            GE+A+ELF  MLR GI P+ I FV +L ACSH GL+ +G   F SM D +GV+P + HY
Sbjct: 333 QGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHY 392

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CMVDLLGRAG L EAL++I+ MPVE ++V+WG+LL AC+ H+++D+A   A  + +L  
Sbjct: 393 TCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQS 452

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           +K G +VLLSNIYA+AGKW ++A+ R  M + G+RK+PG + IEV  K+++F  GD++HP
Sbjct: 453 QKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHP 512

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
             N I  ML+ +  +L  AGY PD  +VL DVDE+ K+ LL  HSEKLA+AFGL+   + 
Sbjct: 513 RSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQG 572

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PIR+ KNLR+C DCH+F K VS +  + IIVRD  RFH F++G CSC D+W
Sbjct: 573 HPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 201/428 (46%), Gaps = 36/428 (8%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           QVH  I   G  R++ V N L+  Y E G + D + +FD MS+R+  SW+ ++   A+  
Sbjct: 71  QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVG 130

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
                 ++F E++  G   +  +   VI AC  L++L+ G  +     + G+     +  
Sbjct: 131 NFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCA 190

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            LVDMY +C  V+ A Q+F +   R+L     ++      G+  E+L   D M   G  P
Sbjct: 191 TLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVP 250

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRI 397
           D+V +++ V A A+LG +   +  H Y+   G    D I  T MIDMY KCG  E A  I
Sbjct: 251 DKVALVTVVYACAKLGAMNKAKAIHAYINGTGYS-LDVILGTAMIDMYAKCGSVESARWI 309

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD M  + V++W+++IA    +G                                 E+A+
Sbjct: 310 FDRMQVRNVITWSAMIAAYGYHGQG-------------------------------EKAL 338

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDM 516
           ELF +ML   I  +R+T V +  AC + G ++  +  ++ + ++ G+  D++  T +VD+
Sbjct: 339 ELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDL 398

Query: 517 FARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-QGIKPDSI 574
             R G    A+++   M  ++D   W A +GA  +  + + A  +   +L+ Q  KP   
Sbjct: 399 LGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHY 458

Query: 575 VFVGVLTA 582
           V +  + A
Sbjct: 459 VLLSNIYA 466



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 186/387 (48%), Gaps = 24/387 (6%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           SL +C+ L +++Q H  I   G     +  +K++    + G  E    AQ+ FD   K +
Sbjct: 59  SLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALED---AQELFDGMSKRH 115

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
             S     ++ ++ GY+ +G       ++ EL   G   D ++ P V+ AC        G
Sbjct: 116 PYS-----WSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCG 170

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             +H   +K G D   FV   L++ Y  C  + D  ++F +M +R++ +WT +I A A  
Sbjct: 171 RLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAES 230

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            +P E++  F  M  +GI P+ V +V V+ ACAKL  +     + AYI+  G   + ++ 
Sbjct: 231 GVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILG 290

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
            A++DMY KCG+V++A+ +F   + RN++  + +++ Y   G   +AL +   ML  G  
Sbjct: 291 TAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGIL 350

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT--------MIDMYMKCG 389
           P+R+T +S + A +  G +  G+       R     WD    T        M+D+  + G
Sbjct: 351 PNRITFVSLLYACSHAGLIEEGQ-------RFFSSMWDEYGVTPDVKHYTCMVDLLGRAG 403

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAG 415
           + + A  + + M   K  V W +L+  
Sbjct: 404 RLDEALEMIEGMPVEKDEVLWGALLGA 430


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/602 (40%), Positives = 350/602 (58%), Gaps = 37/602 (6%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+  Y   G    A+ +F    ++N+V  N ++ +YV   L  EAL+I   ML     PD
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T    + A + L +L  G   H  +++ GL+    I N ++ MY KCG    A ++ D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREV------------------------------- 428
            M  + VVSWNS++AG  ++G  + A E+                               
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256

Query: 429 ------FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                 F  M  ++ ISWN M+      +M  EA+ LF  M    +K D VT+  +  AC
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPAC 316

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           G L AL L + ++ YIEK  +  ++ L  AL+DM+A+CG  + A  VF +M  RDV +WT
Sbjct: 317 GDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWT 376

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + + A    G G  AV LF +ML  G  PDSI FV VL+ACSH GL++QG H FR MT+ 
Sbjct: 377 SMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQ 436

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           +G+ P+I H+ CMVDL GRAG + EA   IK MP+EPN+ +WG+LL+AC+ H  +DI   
Sbjct: 437 YGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLV 496

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA+ + +L P++SG +VLLSNIYA AG W +V  VR  MK+ GI+K+PG S++E+NG+VH
Sbjct: 497 AADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVH 556

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F +GD+ HP+  NI   L  +  ++++ GY+P   + L DV+ ++K+  L+ HSEKLA+
Sbjct: 557 TFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAI 616

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
            F +++T +  PIR+ KNLR+C DCH   KL+SK+  R IIVRD NRFH F  G CSC D
Sbjct: 617 VFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGD 676

Query: 843 FW 844
           +W
Sbjct: 677 YW 678



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 204/457 (44%), Gaps = 66/457 (14%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           YI D      +  +N +IR Y    L VEA+S++  +      PD +TFP VL AC+   
Sbjct: 92  YIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLD 151

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G+QVH AIVK+G D ++F+ N L+  YG+CG + + R+V D+M  R+VVSW S++ 
Sbjct: 152 NLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVA 211

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             A+     +A+ +  EM    +  ++ TM              L   VC          
Sbjct: 212 GYAQSGQFDDALEICKEMDSLNLNHDAGTMA------------SLSPVVC---------- 249

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
                      Y     V     +F     +NL+  N +++ YV   +  EA+++  +M 
Sbjct: 250 -----------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME 298

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G +PD VT+ S + A   L  L  GR  H Y+ +  L+    + N ++DMY KCG  E
Sbjct: 299 ECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLE 358

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +FD M  + VVSW S+++   ++G             G D                
Sbjct: 359 EARDVFDKMRLRDVVSWTSMMSAYGRSGQ------------GYD---------------- 390

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLAT 511
              A+ LF  ML      D +  V V SAC + G LD  +  +  + E+ GI   ++   
Sbjct: 391 ---AVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA 447

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
            +VD+F R G+ + A    ++M  + +   W A + A
Sbjct: 448 CMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 21/271 (7%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L+ CK ++ L       L    G   S +S VVC      + E++ Y    F+   K N
Sbjct: 222 ALEICKEMDSLN------LNHDAGTMAS-LSPVVCYT----SLENVQYIHNMFERMTKKN 270

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
                L  +N +I  Y    +  EA+SL++++   G+ PD  T   +L AC   SA   G
Sbjct: 271 -----LISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG 325

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
            ++H  I K     ++ +EN L++ Y +CG + + R VFD+M  R+VVSWTS++ A  R 
Sbjct: 326 RRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALM 276
               +AV LF +M++ G  P+S+  V V+SAC+    L+ G      + E  G+      
Sbjct: 386 GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEH 445

Query: 277 VNALVDMYMKCGAVDTA----KQLFGECKDR 303
              +VD++ + G V+ A    KQ+  E  +R
Sbjct: 446 FACMVDLFGRAGEVEEAYSFIKQMPMEPNER 476



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 11/209 (5%)

Query: 460 FRVMLS-ERIKVDRVTM-VGVASAC-----GYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           FR  +S  RI+ DR+ + V    AC      Y G   L K     +    +  D  LA  
Sbjct: 17  FRGFVSLTRIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIK 76

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+  ++  G+   A  +F R  +++V  +   I +        +A+ +F  ML     PD
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
              F  VL ACS    +  G  +  ++  + G+   +     +V + G+ G L EA  ++
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKV-GLDTNLFIGNALVAMYGKCGCLREARKVL 195

Query: 633 KSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
             MP    DV+ W S++A   +    D A
Sbjct: 196 DQMPYR--DVVSWNSMVAGYAQSGQFDDA 222


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 282/800 (35%), Positives = 433/800 (54%), Gaps = 40/800 (5%)

Query: 46  NELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           N  K  HCHILK G        + ++ T    G  E    A K FD     N  S     
Sbjct: 20  NAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLED---ASKLFDEMPLTNTVS----- 71

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +L +G+S       A  L + L   G   ++F F  +L            + VH  + 
Sbjct: 72  FVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVY 131

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G   D FV   LI+ Y  CG++   R+VFD +  +++VSWT ++   A     ++++ 
Sbjct: 132 KLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLL 191

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF +M   G +PN+ T+   + +C  L+  ++G  V     ++    +  +  AL+++Y 
Sbjct: 192 LFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYT 251

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR-PDRVTML 344
           K G +  A+Q F E    +L+  + ++S Y +   ++EAL +   M       P+  T  
Sbjct: 252 KSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFA 311

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A A L  L  G   H  VL+ GL+    + N ++D+Y KCG               
Sbjct: 312 SVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCG--------------- 356

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                           ++E++ ++F+    ++ ++WNT++ G  Q    E+A+ LF  ML
Sbjct: 357 ----------------EIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNML 400

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              I+   VT   V  A   L AL+  + I++   K   + D  +A +L+DM+A+CG   
Sbjct: 401 GLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRID 460

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A   F +M+K+D  +W A I   ++ G G +A+ LF+ M +   KP+ + FVGVL+ACS
Sbjct: 461 DARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACS 520

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           + GL+++G   F+SM   +G+ P I HY CMV LLGR+G   EA+ LI  +P +P+ ++W
Sbjct: 521 NAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVW 580

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LL AC  H+N+D+    A+R+ E++P+    HVLLSN+YA+A +W NVA VR  MK++
Sbjct: 581 RALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKK 640

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
            ++K PG S +E  G VH FT GD SHP +  I +ML  +  + RDAGYVPD + VLLDV
Sbjct: 641 KVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDV 700

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           ++ EK+ LL  HSE+LA+AFGLI       IR++KNLR+C DCH+  KLVSK+  REI++
Sbjct: 701 EDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVI 760

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD NRFH FRQG CSC D+W
Sbjct: 761 RDINRFHHFRQGVCSCGDYW 780



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 239/522 (45%), Gaps = 40/522 (7%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D  ++  +L    ++     G  +H  I+K G   D+F +N L+N Y   G + D  ++F
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           DEM   N VS+ +L    +R    + A  L   +  EG + N      ++     L +++
Sbjct: 62  DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKL---LVSMD 118

Query: 257 LGD---RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           L D    V AY+ +LG +A+A +  AL+D Y  CG VD A+Q+F     +++V    +++
Sbjct: 119 LADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVA 178

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y       ++L +  +M + G RP+  T+ +A+ +   L     G+  HG  L+   + 
Sbjct: 179 CYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDR 238

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              +   ++++Y K G+   A + F+ M    ++ W                        
Sbjct: 239 DLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPW------------------------ 274

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELF-RVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                  + M+    Q +  +EA+ELF R+  S  +  +  T   V  AC  L  L+L  
Sbjct: 275 -------SLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGN 327

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I++ + K G+  ++ ++ AL+D++A+CG+ + ++++F    +++  AW   I      G
Sbjct: 328 QIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLG 387

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           +GE+A+ LF+ ML   I+P  + +  VL A +    +  G  +  S+T     +   V  
Sbjct: 388 DGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQI-HSLTIKTMYNKDSVVA 446

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             ++D+  + G + +A      M  + ++V W +L+     H
Sbjct: 447 NSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALICGYSIH 487


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/602 (40%), Positives = 350/602 (58%), Gaps = 37/602 (6%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+  Y   G    A+ +F    ++N+V  N ++ +YV   L  EAL+I   ML     PD
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T    + A + L +L  G   H  +++ GL+    I N ++ MY KCG    A ++ D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREV------------------------------- 428
            M  + VVSWNS++AG  ++G  + A E+                               
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256

Query: 429 ------FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                 F  M  ++ ISWN M+      +M  EA+ LF  M    +K D VT+  +  AC
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPAC 316

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           G L AL L + ++ YIEK  +  ++ L  AL+DM+A+CG  + A  VF +M  RDV +WT
Sbjct: 317 GDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWT 376

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + + A    G G  AV LF +ML  G  PDSI FV VL+ACSH GL++QG H FR MT+ 
Sbjct: 377 SMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQ 436

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           +G+ P+I H+ CMVDL GRAG + EA   IK MP+EPN+ +WG+LL+AC+ H  +DI   
Sbjct: 437 YGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLV 496

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA+ + +L P++SG +VLLSNIYA AG W +V  VR  MK+ GI+K+PG S++E+NG+VH
Sbjct: 497 AADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVH 556

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F +GD+ HP+  NI   L  +  ++++ GY+P   + L DV+ ++K+  L+ HSEKLA+
Sbjct: 557 TFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAI 616

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
            F +++T +  PIR+ KNLR+C DCH   KL+SK+  R IIVRD NRFH F  G CSC D
Sbjct: 617 VFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGD 676

Query: 843 FW 844
           +W
Sbjct: 677 YW 678



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 203/457 (44%), Gaps = 66/457 (14%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           YI D      +  +N +IR Y    L VEA+S++  +      PD +TFP VL AC+   
Sbjct: 92  YIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLD 151

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G+QVH AIVK+G D ++F+ N L+  YG+CG + + R+V D+M  R+VVSW S++ 
Sbjct: 152 NLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVA 211

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             A+     +A+ +  EM    +  ++ TM              L   VC          
Sbjct: 212 GYAQSGQFDDALEICKEMDSLNLNHDAGTMA------------SLSPVVC---------- 249

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
                      Y     V     +F     +NL+  N +++ YV   +  EA+++  +M 
Sbjct: 250 -----------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME 298

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G +PD VT+ S + A   L  L  GR  H Y+ +  L     + N ++DMY KCG  E
Sbjct: 299 ECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLE 358

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +FD M  + VVSW S+++   ++G             G D                
Sbjct: 359 EARDVFDKMRLRDVVSWTSMMSAYGRSGQ------------GYD---------------- 390

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLAT 511
              A+ LF  ML      D +  V V SAC + G LD  +  +  + E+ GI   ++   
Sbjct: 391 ---AVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA 447

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
            +VD+F R G+ + A    ++M  + +   W A + A
Sbjct: 448 CMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 21/271 (7%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L+ CK ++ L       L    G   S +S VVC      + E++ Y    F+   K N
Sbjct: 222 ALEICKEMDSLN------LNHDAGTMAS-LSPVVCYT----SLENVQYIHNMFERMTKKN 270

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
                L  +N +I  Y    +  EA+SL++++   G+ PD  T   +L AC   SA   G
Sbjct: 271 -----LISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG 325

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
            ++H  I K     ++ +EN L++ Y +CG + + R VFD+M  R+VVSWTS++ A  R 
Sbjct: 326 RRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALM 276
               +AV LF +M++ G  P+S+  V V+SAC+    L+ G      + E  G+      
Sbjct: 386 GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEH 445

Query: 277 VNALVDMYMKCGAVDTA----KQLFGECKDR 303
              +VD++ + G V+ A    KQ+  E  +R
Sbjct: 446 FACMVDLFGRAGEVEEAYSFIKQMPMEPNER 476



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 11/209 (5%)

Query: 460 FR-VMLSERIKVDRVTM-VGVASAC-----GYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           FR ++ S RI+ DR+ + V    AC      Y G   L K     +    +  D  LA  
Sbjct: 17  FRGIVSSTRIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIK 76

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+  ++  G+   A  +F R  +++V  +   I +        +A+ +F  ML     PD
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
              F  VL ACS    +  G  +  ++  + G+   +     +V + G+ G L EA  ++
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKV-GLDTNLFIGNALVAMYGKCGCLREARKVL 195

Query: 633 KSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
             MP    DV+ W S++A   +    D A
Sbjct: 196 DQMPYR--DVVSWNSMVAGYAQSGQFDDA 222


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/552 (41%), Positives = 351/552 (63%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           AK +F       +   NT + ++       +A+++   +      PD  T    + A ++
Sbjct: 66  AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           L D+  G++ HGYV + GL+    + N ++ +Y  CG+  +A ++FD M  + V++WN +
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           IA L+K GD E A ++F+EMP R+  SW +M+GG  Q    +EA++LF  M    +  + 
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           VT+V V  AC  +G L L + I+ +  ++G   ++++   L+DM+ +CG  + A ++F  
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDN 305

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           ME+R V +W+A I  +A  G  E A+ LFN+M+  G+KP+++ F+G+L ACSH G+V +G
Sbjct: 306 MEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKG 365

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F SMT  +G+ P+I HYGCMVDL  RAGLL EA + I +MP+ PN V+WG+LL  C+
Sbjct: 366 RKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCK 425

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H+N+ +A  A   +++LDP   G +V+LSNIYA AG+W +VARVR  M+++G++K PG 
Sbjct: 426 VHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGW 485

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           SSI V G V+ F +GD++HP+   I     ++  R++  GYVP+ + VLLD++E +K+  
Sbjct: 486 SSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKF 545

Query: 773 LSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHF 832
           L  HSEKLA+ FGLI T+    IR++KNLR+C DCH+  K++S V  REI+VRD NRFH 
Sbjct: 546 LYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHC 605

Query: 833 FRQGSCSCSDFW 844
           F+ GSCSC D+W
Sbjct: 606 FKNGSCSCGDYW 617



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 228/469 (48%), Gaps = 43/469 (9%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           PS   L N  +  ELKQ H H+LK         +S+V   CA   +F   +YA+  F   
Sbjct: 17  PSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSF---SYAKLIFQLL 73

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
                 ++ +  +N+ +R ++      +AISL+  L  F I PD +T  FVL AC++   
Sbjct: 74  -----DASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD---------------- 197
              G  VHG + K+G   ++F++N +++ Y  CG+I   R+VFD                
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188

Query: 198 ---------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
                          EM ERNV SWTS+I   A+    KEA+ LF EM + G+ PN VT+
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           V V+ ACA + NL LG R+  + +  G + N  + N L+DMY+KCG ++ A ++F   ++
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R +V  + +++     G A +ALA+ ++M+  G +P+ VT +  + A + +G +  GR  
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKY 368

Query: 363 HGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNG 420
              + R+ G+         M+D++ + G  + A     +M      V W +L+ G   + 
Sbjct: 369 FASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK 428

Query: 421 DVESAREVFSEMPGRDHIS--WNTMLGGLTQENMFEEAMELFRVMLSER 467
           +++ A E    +   D ++  +  +L  +  E    E +   R ++ +R
Sbjct: 429 NIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           N     A+ +F  +   +   WNT L    + +   +A+ LF  +    I  D  T   V
Sbjct: 60  NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD- 537
             AC  L  +   K ++ Y+EK G+  +M L   +V ++A CG+   A +VF +M +RD 
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179

Query: 538 ------------------------------VSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
                                         V +WT+ IG  A  G  ++A++LF EM   
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G+ P+ +  V VL AC+  G +  G  +    ++  G    I     ++D+  + G L +
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRI-HDFSNRSGYEKNIRVCNTLIDMYVKCGCLED 298

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           A  +  +M  E   V W +++A    H   + A
Sbjct: 299 ACRIFDNME-ERTVVSWSAMIAGLAAHGRAEDA 330


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/807 (34%), Positives = 419/807 (51%), Gaps = 69/807 (8%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           N ++  Y+  G+ +E +  +      G+L D  T   VL AC        G Q+H   VK
Sbjct: 68  NRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 167 MGFDR-DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
            G DR +V     L++ Y +CG + +G  VF+ M ++NVV+WTSL+  CA   +  E + 
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LFF M  EGI PN  T   V+SA A    L+LG RV A   + G +++  + N+L++MY 
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG V+ AK +F   + R++V  NT+M+         EAL +  E      +  + T  +
Sbjct: 248 KCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NK 404
            +   A L  L   R  H  VL++G     ++   + D Y KCG+   A  IF   + ++
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEM-------------------------------- 432
            VVSW ++I+G I+NGD+  A  +FS M                                
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVI 427

Query: 433 -PGRDHISW--NTMLGGLTQENMFEEAMELFRV-----------MLS------------- 465
                HI +    +L   ++    E+A+ +F++           MLS             
Sbjct: 428 KTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATY 487

Query: 466 -------ERIKVDRVTMVGVASACGYLGA-LDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
                  + IK +  T+  V  AC    A +D  +  +A   K   H  + +++ALV M+
Sbjct: 488 LFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMY 547

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           +R G+   A  VF R   RD+ +W + I   A  G   +A+E F +M   GI+ D + F+
Sbjct: 548 SRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFL 607

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            V+  C+H GLV +G   F SM   H ++P + HY CMVDL  RAG L E + LI+ MP 
Sbjct: 608 AVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPF 667

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
               ++W +LL AC+ H+NV++  ++A+++  L+P  S  +VLLSNIYA+AGKW     V
Sbjct: 668 PAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEV 727

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  M  + ++K  G S I++  KVH F + D+SHP  + I   L+ +  RL+  GY P+ 
Sbjct: 728 RKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNT 787

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
           + VL D+ E +K+ +L  HSE+LA+AFGLI+T    P+++VKNLR+C DCH   K+VS +
Sbjct: 788 SFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMI 847

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DREII+RD +RFH F  G+CSC DFW
Sbjct: 848 EDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 16/253 (6%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H  ++K    H P   + ++ + ++ G+ E      K     I+  +  A   M +  
Sbjct: 421 QIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFK----MIEQKDVVAWSAMLSCH 476

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT-KSSAFGEGVQVHGAIVKMG 168
            +   C G    A  L+ ++A  GI P++FT   V++AC   S+   +G Q H   +K  
Sbjct: 477 AQAGDCEG----ATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           +   + V + L++ Y   G+I   + VF+  ++R++VSW S+I   A+     +A+  F 
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL--GMKANALMVN--ALVDMY 284
           +M   GI+ + VT + VI  C     +  G +   Y D +    K N  M +   +VD+Y
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ---YFDSMVRDHKINPTMEHYACMVDLY 649

Query: 285 MKCGAVDTAKQLF 297
            + G +D    L 
Sbjct: 650 SRAGKLDETMSLI 662


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/707 (36%), Positives = 393/707 (55%), Gaps = 47/707 (6%)

Query: 179 LINFYGECGDIVDGRRVFDEM--SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-I 235
           L+      G + D    FD +  + R+ V   +++ A AR  L   AV +F  ++  G +
Sbjct: 98  LVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 157

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKC---- 287
           +P+  +   +ISA  ++ NL      C  +    +K+ A  V    NAL+ +YMKC    
Sbjct: 158 RPDDYSFTALISAVGQMHNLAAPH--CTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 288 ------------------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
                                         G V+ A+ +F E   +  V+ N ++S YV+
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR---NGL-EG 373
            G+  +A  +   M+      D  T  S +SA A  G  + G+  HG ++R   N + E 
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + N ++ +Y K GK  +A RIFD M+ K VVSWN++++G I +G ++ A EVF  MP
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
            ++ +SW  M+ G     + E+A++LF  M +E +K    T  G  +ACG LGAL   + 
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++A++ + G         AL+ M+A+CG    A  VF  M   D  +W A I A+   G+
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 515

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G +A+ELF++M+ +GI PD I F+ +LTAC+H GLV++G+H F SM    G+SP   HY 
Sbjct: 516 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
            ++DLLGR+G +GEA DLIK+MP EP   IW ++L+ C+ + +++  AYAA+++  + P+
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G ++LLSN Y++AG+W + ARVR  M+++G++K PG S IEV  K+H F  GD  HPE
Sbjct: 636 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPE 695

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              +   L  +  R+R  GYVPD   VL D++  EK+Y+L  HSEKLA+ FGL+      
Sbjct: 696 AQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGA 755

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
            + V+KNLR+C DCH+    +SK   REI+VRD  RFH F+ G CSC
Sbjct: 756 TVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 227/536 (42%), Gaps = 105/536 (19%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTK--SSAFGEGVQVH 161
           ++N+++  ++   L   A+S++  L G G L PD ++F  +++A  +  + A     Q+H
Sbjct: 127 LHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLH 186

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIV---DGRRVFDEMSERNVVSWTSLICACARR- 217
            +++K G    + V N LI  Y +C       D R+V DEM +++ ++WT+++    RR 
Sbjct: 187 CSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRG 246

Query: 218 ------------------------------DLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                                          +  +A  LF  MV E +  +  T   V+S
Sbjct: 247 DVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLS 306

Query: 248 ACAKLQNLELGDRVCAYIDELG---MKANALMV-NALVDMYMKCGAVDTAKQLFGECKDR 303
           ACA       G  V   I  L    +   AL V NALV +Y K G +  AK++F     +
Sbjct: 307 ACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK 366

Query: 304 NLVLCNTIM-------------------------------SNYVRLGLAREALAILDEML 332
           ++V  NTI+                               S YV  GL+ +AL + ++M 
Sbjct: 367 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 426

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               +P   T   A++A  +LG L  GR  H ++++ G E  +S  N ++ MY KCG   
Sbjct: 427 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 486

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +F  M N   VSWN++I+ L ++G             GR                 
Sbjct: 487 DARLVFLVMPNLDSVSWNAMISALGQHGH------------GR----------------- 517

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLAT 511
             EA+ELF  M++E I  DR++ + + +AC + G +D     +  ++++ GI        
Sbjct: 518 --EALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
            L+D+  R G    A  + + M  +   S W A +      G+ E      +++ R
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFR 631



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 210/454 (46%), Gaps = 67/454 (14%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY---------------YI 94
           Q HC +LK G     S  + ++    +  T E+   A+K  D                Y+
Sbjct: 184 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 243

Query: 95  KDNETSA--TLF---------MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
           +  + +A  ++F         ++N++I GY   G+  +A  L+  +    +  D+FTF  
Sbjct: 244 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 303

Query: 144 VLNACTKSSAFGEGVQVHGAIVKM--GF--DRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           VL+AC  +  F  G  VHG I+++   F  +  + V N L+  Y + G IV  +R+FD M
Sbjct: 304 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 363

Query: 200 SERNVVSWTS-------------------------------LICACARRDLPKEAVYLFF 228
           + ++VVSW +                               ++       L ++A+ LF 
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 423

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M  E +KP   T    I+AC +L  L+ G ++ A++ + G +A+    NAL+ MY KCG
Sbjct: 424 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 483

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           AV+ A+ +F    + + V  N ++S   + G  REAL + D+M+  G  PDR++ L+ ++
Sbjct: 484 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 543

Query: 349 ASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           A    G +  G      + R+ G+   +     +ID+  + G+   A  +   M  +   
Sbjct: 544 ACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTP 603

Query: 408 S-WNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
           S W ++++G   NGD+E    +A ++F  +P  D
Sbjct: 604 SIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHD 637



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 18/203 (8%)

Query: 20  LTNQHKAK-TTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCA 75
           L NQ +A+   P D    G++  C  L  LK   Q H H+++ G     S  + ++   A
Sbjct: 421 LFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYA 480

Query: 76  QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL 135
           + G             + +  N  S +   +N++I      G G EA+ L+ ++   GI 
Sbjct: 481 KCGAVNDARLV-----FLVMPNLDSVS---WNAMISALGQHGHGREALELFDQMVAEGID 532

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVK---MGFDRDVFVENCLINFYGECGDIVDG 192
           PD+ +F  +L AC  +    EG     ++ +   +    D +    LI+  G  G I + 
Sbjct: 533 PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYAR--LIDLLGRSGRIGEA 590

Query: 193 RRVFDEMS-ERNVVSWTSLICAC 214
           R +   M  E     W +++  C
Sbjct: 591 RDLIKTMPFEPTPSIWEAILSGC 613


>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
 gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 622

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/553 (41%), Positives = 344/553 (62%), Gaps = 1/553 (0%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F + ++ NL + N ++  +       +A     +ML     PD +T    + AS++
Sbjct: 70  AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           +  +L G   H  ++R G +    + N+++ MY  CG    A RIF  M  + VVSW S+
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           +AG  K G VE+ARE+F EMP R+  +W+ M+ G  + N FE+A++LF  M  E +  + 
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
             MV V S+C +LGAL+  +  Y Y+ K+ +  ++ L TALVDMF RCGD ++A+ VF  
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           + + D  +W++ I  +A+ G+  +A+  F++M+  G  P  + F  VL+ACSHGGLV +G
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
             ++ +M   HG+ P++ HYGC+VD+LGRAG L EA + I  M V+PN  I G+LL AC+
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            ++N ++A      + ++ PE SG +VLLSNIYA AG+W  +  +R  MKE+ ++K PG 
Sbjct: 430 IYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGW 489

Query: 713 SSIEVNGKVHEFTSG-DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
           S IE++GK+++FT G D+ HPEM  I     E+  ++R  GY  +  +   DVDE+EK+ 
Sbjct: 490 SLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKES 549

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
            +  HSEKLA+A+G++ T     IR+VKNLR+C DCH+  KL+S+VY RE+IVRD NRFH
Sbjct: 550 SIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFH 609

Query: 832 FFRQGSCSCSDFW 844
            FR G CSC D+W
Sbjct: 610 HFRNGVCSCRDYW 622



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 177/375 (47%), Gaps = 43/375 (11%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P +  L++C + ++LK  H  +L+  L       S+++  C    TF   T     + Y 
Sbjct: 14  PKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLL-GYAYG 72

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I     +  LF++N LIR +S      +A   Y ++    I PD  TFPF++ A ++   
Sbjct: 73  IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI-- 211
              G Q H  IV+ GF  DV+VEN L++ Y  CG I    R+F +M  R+VVSWTS++  
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192

Query: 212 -CAC----------------------------ARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
            C C                            A+ +  ++A+ LF  M  EG+  N   M
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           V VIS+CA L  LE G+R   Y+ +  M  N ++  ALVDM+ +CG ++ A  +F    +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
            + +  ++I+      G A +A+    +M+  G  P  VT  + +SA +           
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS----------- 361

Query: 363 HGYVLRNGLEGWDSI 377
           HG ++  GLE ++++
Sbjct: 362 HGGLVEKGLEIYENM 376



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 207/484 (42%), Gaps = 79/484 (16%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI-------NFYGECGDIVDGRRVF 196
           +L +C   S+F +   +HG +++     DVFV + L+        F      +     +F
Sbjct: 18  LLQSC---SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
            ++   N+  +  LI   +    P +A   + +M++  I P+++T   +I A ++++ + 
Sbjct: 75  SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYM------------------------------- 285
           +G++  + I   G + +  + N+LV MY                                
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG V+ A+++F E   RNL   + +++ Y +     +A+ + + M   G   +   M+S
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +S+ A LG L  G   + YV+++ +     +   ++DM+ +CG  E A  +F+ +    
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
            +SW+S+I GL  +G    A   FS+M           LG + ++               
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQM---------ISLGFIPRD--------------- 350

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQ 524
                  VT   V SAC + G ++    IY  ++K+ GI   ++    +VDM  R G   
Sbjct: 351 -------VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLA 403

Query: 525 RAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS---IVFVGVL 580
            A     +M  K +     A +GA  +  N E A  + N +++  +KP+     V +  +
Sbjct: 404 EAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK--VKPEHSGYYVLLSNI 461

Query: 581 TACS 584
            AC+
Sbjct: 462 YACA 465


>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
 gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
          Length = 723

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/575 (41%), Positives = 361/575 (62%), Gaps = 2/575 (0%)

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +L L D      DE+ +K +A++   ++   ++ G +D A++L  +  +RN+V   ++++
Sbjct: 150 SLGLTDDARRAFDEVPVK-DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIA 208

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y R G   +A+   + ML  G  PD V ++ A+SA ++L +L  GR+ H  V +  ++ 
Sbjct: 209 GYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQM 268

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSN-KTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            D +  T+IDMY KCG    A  +FD +   +    WN +I G  K G V+ AR +F +M
Sbjct: 269 TDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQM 328

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             RD I++N+M+ G        +A++LF  +    ++ D  T+V + +AC  LGAL   +
Sbjct: 329 GARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGR 388

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++A IE+  +  D+ L TALVDM+ +CG    A  VF RM +RDV  W+A I  +A  G
Sbjct: 389 ALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNG 448

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G  A+E F +M R G +P S+ ++ VLTACSH  L+N+G   F  M  +H + PQI HY
Sbjct: 449 MGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHY 508

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GCM+DLL R+GLL EA+ L+++MP++PN VIW S+L+AC+ H+N+D+A +AAE + +L P
Sbjct: 509 GCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAP 568

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           E+  V+V L NIY  + +W    R+R+ M+EQG++K  G SSI V G+VH+F   D+SHP
Sbjct: 569 EEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHP 628

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
               I +M+ E+  RL+ AGY P  + + +DVDE+EK+  L  HSEK+A+AFGLIS    
Sbjct: 629 WTLEIITMMEEIARRLKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPN 688

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           +PI ++KNLR+C DCHS  KL+S++++REIIVRD 
Sbjct: 689 LPIHIMKNLRVCEDCHSAIKLISQLWNREIIVRDR 723



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 145/602 (24%), Positives = 254/602 (42%), Gaps = 108/602 (17%)

Query: 43  KTLNELKQPHCHILKQG-LGHKPS--YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           +++ +  Q H  +   G + H+PS  ++   +  C  +     L Y    FD        
Sbjct: 10  RSVRQASQLHAILTTSGRIAHRPSAEHLLNSLTNC--LSAPRHLRYVLSLFDRL-----P 62

Query: 100 SATLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
             T F++++ +R       G +  + +   +   G+    FTF FV   C   +  G   
Sbjct: 63  HPTTFLHDTALRACLQASAGADHPVLILRRMRRGGVRMSAFTFHFVFRCCAAGAGAGLCR 122

Query: 159 QVHGAIVKMGFDRDV-FVENCLINFYGECGDIVDGRRVFDEMS----------------- 200
            +H A ++         V N LI+ Y   G   D RR FDE+                  
Sbjct: 123 MLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRW 182

Query: 201 --------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
                         ERNVVSWTSLI   +R   P +AVY F  M+ +G++P+ V ++  +
Sbjct: 183 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGAL 242

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC------------------- 287
           SAC+KL+NLE G  +   + +  ++    +V  L+DMY KC                   
Sbjct: 243 SACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKP 302

Query: 288 -------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
                        G VD A+ LF +   R+++  N++++ Y+  G  R+AL +  ++  H
Sbjct: 303 EPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRH 362

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G R D  T++S ++A A LG L  GR  H  + +  +E    +   ++DMYMKCG+ + A
Sbjct: 363 GMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEA 422

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
             +F  M  + V +W+++IAGL  NG                               M  
Sbjct: 423 TAVFHRMGERDVHTWSAMIAGLAFNG-------------------------------MGM 451

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATAL 513
           +A+E F  M  +  +   VT + V +AC +   L+  +  +  +   + +H  ++    +
Sbjct: 452 DALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCM 511

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           +D+ AR G    AM + + M  + +   W + + A  +  N + A      +L+   + D
Sbjct: 512 IDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEED 571

Query: 573 SI 574
           ++
Sbjct: 572 AV 573



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 152/333 (45%), Gaps = 36/333 (10%)

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSI-CNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           +A  G  LC RM H   LR  L     I  N +I MY   G  + A R FD +  K  V 
Sbjct: 113 AAGAGAGLC-RMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVV 171

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W ++I GL++ G ++ AR +  + P R+ +SW +++ G ++     +A+  F  MLS+ +
Sbjct: 172 WATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGV 231

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           + D V ++G  SAC  L  L+  + ++  + K  I    +L   L+DM+A+CGD  +A  
Sbjct: 232 EPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQA 291

Query: 529 V--------------------------------FRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           V                                F +M  RDV  + + I      G    
Sbjct: 292 VFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRD 351

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A++LF ++ R G++ D+   V +LTAC+  G + QG  L  S+     V   +     +V
Sbjct: 352 ALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQ-RIVEEDVYLVTALV 410

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           D+  + G + EA  +   M  E +   W +++A
Sbjct: 411 DMYMKCGRVDEATAVFHRMG-ERDVHTWSAMIA 442



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/502 (22%), Positives = 219/502 (43%), Gaps = 74/502 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + SLI GYS  G   +A+  +  +   G+ PD+      L+AC+K      G  +H  + 
Sbjct: 203 WTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVG 262

Query: 166 KMGFDRDVFVENCLINFYGECGDI----------------------VDG----------R 193
           K        +   LI+ Y +CGDI                      +DG          R
Sbjct: 263 KKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIAR 322

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            +FD+M  R+V+++ S+I         ++A+ LF ++   G++ ++ T+V +++ACA L 
Sbjct: 323 SLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLG 382

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            L  G  + A I++  ++ +  +V ALVDMYMKCG VD A  +F    +R++   + +++
Sbjct: 383 ALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIA 442

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLR 368
                G+  +AL    +M   G +P  VT ++ ++A +    L  GR     M   + L 
Sbjct: 443 GLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLH 502

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESARE 427
             +E +      MID+  + G  + A  +   M      V W S+++    + +++ AR 
Sbjct: 503 PQIEHY----GCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLAR- 557

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER--IKVDRVTMV----GVASA 481
                    H + + +     ++ ++   ++L+ + +  R  ++  R+ M+    GV   
Sbjct: 558 ---------HAAEHLLKLAPEEDAVY---VQLYNIYIDSRQWVEAKRIRMLMEEQGVKKT 605

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
            GY  ++ +A  ++ ++  +  H        ++ M           ++ RR++    S  
Sbjct: 606 AGY-SSITVAGQVHKFVVNDQSH---PWTLEIITMME---------EIARRLKSAGYSPA 652

Query: 542 TAAIGAMAMEGNGEQAVELFNE 563
           T+ I     E   EQA+   +E
Sbjct: 653 TSRIAVDVDEEEKEQALLAHSE 674


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/717 (34%), Positives = 404/717 (56%), Gaps = 43/717 (5%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG-FDRDVFVENCLINFYGECG-DIVD 191
           I P+++ F  +L +C+    F  G+ +   ++K G FD  V V   LI+ + + G DI  
Sbjct: 141 IYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQS 200

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R VFD+M  +N+V+WT +I   ++  L  +AV LF  ++     P+  T+  ++SAC +
Sbjct: 201 ARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVE 260

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L+   LG ++ +++   G+ ++  +   LVDMY K  AV+ ++++F      N++    +
Sbjct: 261 LEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTAL 320

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +S YV+    +EA+ +   ML     P+  T  S + A A L D   G+  HG  ++ GL
Sbjct: 321 ISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGL 380

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
              + + N++I+MY +                               +G +E AR+ F+ 
Sbjct: 381 STINCVGNSLINMYAR-------------------------------SGTMECARKAFNI 409

Query: 432 MPGRDHISWNTMLGG----LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +  ++ IS+NT        L  +  F   +E         +     T   + S    +G 
Sbjct: 410 LFEKNLISYNTAADANAKALDSDESFNHEVE------HTGVGASPFTYACLLSGAACIGT 463

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           +   + I+A I K+G   ++ +  AL+ M+++CG+ + A+QVF  M  R+V  WT+ I  
Sbjct: 464 IVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISG 523

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            A  G   +A+ELF EML  G+KP+ + ++ VL+ACSH GL+++ W  F SM   H +SP
Sbjct: 524 FAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISP 583

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
           ++ HY CMVDLLGR+GLL EA++ I SMP + + ++W + L +C+ H+N  +  +AA++I
Sbjct: 584 RMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKI 643

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
            E +P     ++LLSN+YAS G+W +VA +R  MK++ + K  G S IEV+ +VH+F  G
Sbjct: 644 LEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVG 703

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           D SHP+   I   L E+  ++++ GY+P+   VL DV++++K+  L  HSEK+A+A+ LI
Sbjct: 704 DTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALI 763

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ST K  PIRV KNLR+C DCH+  K +S V  REI+VRD NRFH  + G CSC+D+W
Sbjct: 764 STPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/773 (32%), Positives = 431/773 (55%), Gaps = 43/773 (5%)

Query: 77  MGTFES--LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           MG  +S  L+ A+  FD  ++ +  + T+     LI GY+     +EA +L+ ++   G+
Sbjct: 81  MGYLKSGNLSTARSLFDSMVQRSVVTWTM-----LIGGYAQHNRFLEAFNLFADMCRHGM 135

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           +PD  T   +L+  T+  +  E  QVHG +VK+G+D  + V N L++ Y +   +     
Sbjct: 136 VPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACH 195

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F  M+E++ V++ +L+   ++     +A+ LFF+M + G +P+  T   V++A  ++ +
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD 255

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           +E G +V +++ +     N  + NAL+D Y K   +  A++LF E  + + +  N +++ 
Sbjct: 256 IEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC 315

Query: 315 YVRLGLAREALAILDEMLLHGPRPDR--VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
               G   E+L +  E  L   R DR      + +S +A   +L  GR  H   +     
Sbjct: 316 CAWNGRVEESLELFRE--LQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAI 373

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + N+++DMY KC K   A RIF                               +++
Sbjct: 374 SEVLVGNSLVDMYAKCDKFGEANRIF-------------------------------ADL 402

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             +  + W  ++ G  Q+ + E+ ++LF  M   +I  D  T   +  AC  L +L L K
Sbjct: 403 AHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGK 462

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            +++ I ++G   ++   +ALVDM+A+CG  + A+Q+F+ M  R+  +W A I A A  G
Sbjct: 463 QLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNG 522

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           +G  A+  F +M+  G++P+S+ F+ +L ACSH GLV +G   F SMT ++ + P+  HY
Sbjct: 523 DGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHY 582

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
             MVD+L R+G   EA  L+  MP EP++++W S+L +C+ H+N ++A  AA+++  +  
Sbjct: 583 ASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKG 642

Query: 673 EKSGV-HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
            +    +V +SNIYA+AG+W +V +V+  ++E+GIRK+P  S +E+  K H F++ D SH
Sbjct: 643 LRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSH 702

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
           P+   I+  L E+  ++ + GY PD T  L +VDE+ K   L +HSE++A+AF LIST K
Sbjct: 703 PQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPK 762

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             PI V+KNLR C DCH+  K++SK+ +REI VRD++RFH F  GSCSC D+W
Sbjct: 763 GSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 250/543 (46%), Gaps = 49/543 (9%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF---ESLTYAQKAFDYYI-KDNE 98
           +++NE+ Q H H++K G      Y S ++   + + ++    SL  A   F +   KDN 
Sbjct: 153 ESVNEVAQVHGHVVKVG------YDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           T      +N+L+ GYS  G   +AI+L+ ++   G  P +FTF  VL A  +      G 
Sbjct: 207 T------FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQ 260

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           QVH  +VK  F  +VFV N L++FY +   IV+ R++F EM E + +S+  LI  CA   
Sbjct: 261 QVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNG 320

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             +E++ LF E+              ++S  A   NLE+G ++ +        +  L+ N
Sbjct: 321 RVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGN 380

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +LVDMY KC     A ++F +   ++ V    ++S YV+ GL  + L +  EM       
Sbjct: 381 SLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGA 440

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D  T  S + A A L  L  G+  H  ++R+G        + ++DMY KCG  + A ++F
Sbjct: 441 DSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMF 500

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             M  +  VSWN+LI+   +NGD                       GG         A+ 
Sbjct: 501 QEMPVRNSVSWNALISAYAQNGD-----------------------GG--------HALR 529

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMF 517
            F  M+   ++ + V+ + +  AC + G ++   ++  +  +   +    +   ++VDM 
Sbjct: 530 SFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDML 589

Query: 518 ARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
            R G    A ++  RM  + D   W++ + +  +  N E A++  +++       D+  +
Sbjct: 590 CRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPY 649

Query: 577 VGV 579
           V +
Sbjct: 650 VSM 652



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 138/306 (45%), Gaps = 4/306 (1%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  +  +++ G    A ++FD M +K V+S N++I G +K+G++ +AR +F  M  R  +
Sbjct: 46  NFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVV 105

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +W  ++GG  Q N F EA  LF  M    +  D +T+  + S      +++    ++ ++
Sbjct: 106 TWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHV 165

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K G    + +  +L+D + +      A  +F+ M ++D   + A +   + EG    A+
Sbjct: 166 VKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAI 225

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
            LF +M   G +P    F  VLTA      +  G  +   +   + V    V    ++D 
Sbjct: 226 NLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFV-ANALLDF 284

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD--IAAYAAERITELDPEKSG 676
             +   + EA  L   MP E + + +  L+  C  +  V+  +  +   + T  D  +  
Sbjct: 285 YSKHDRIVEARKLFYEMP-EVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFP 343

Query: 677 VHVLLS 682
              LLS
Sbjct: 344 FATLLS 349


>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/515 (44%), Positives = 334/515 (64%), Gaps = 1/515 (0%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           +L + P PD  T  S + A A L  +L G+  H +V + G E    + N+++D+Y K G 
Sbjct: 118 VLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGC 177

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
             +A ++FD M  + VVSWN+LI+G   +G V+ AR VF  M  ++ +SW+TM+ G  + 
Sbjct: 178 NCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARN 237

Query: 451 NMFEEAMELFRVMLSER-IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
             + +A+ELFR M  E  +  + VT+V V SAC +LGALDL KWI+ +I +N I   + L
Sbjct: 238 EKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFL 297

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
             AL DM+A+CG    A  VF  M +RDV +W+  I  +AM G   +A   F EM+  G+
Sbjct: 298 GNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGL 357

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           +P+ I F+G+LTAC+H GLV++G   F  M  ++G++P+I HYGC+VDLL RAG L +A 
Sbjct: 358 EPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAE 417

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
            LI SMP++PN ++WG+LL  C+ +++ +       RI ELD   SG  V L+N+YAS G
Sbjct: 418 SLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMG 477

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
           +  + A  RL+M++    K PG S IE+N  V+EF  GD SHP+   I SM+RE+  +++
Sbjct: 478 RLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMK 537

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
            AGY P    V+ ++DE+EK+  LS HSEKLA+AFGLI+TS+   IR+VKNLR+C DCH 
Sbjct: 538 VAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHD 597

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             K++SK+ +REI+VRD +RFH F+ G CSC+D+W
Sbjct: 598 AIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 170/374 (45%), Gaps = 58/374 (15%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVE--LAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
            +F YN+L++ +S        IS +    +      PD++TF  VL AC   +   EG +
Sbjct: 89  NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECG---------------DIVD------------- 191
           VH  + K G + ++FV N L++ Y + G               D+V              
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208

Query: 192 ---GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVIS 247
               R VFD M E+N+VSW+++I   AR +   +A+ LF +M  EG + PN VT+V V+S
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLS 268

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           ACA L  L+LG  +  +I    ++    + NAL DMY KCG V  AK +F E  +R+++ 
Sbjct: 269 ACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVIS 328

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            + I+      G A EA     EM+  G  P+ ++ +  ++A    G           ++
Sbjct: 329 WSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAG-----------LV 377

Query: 368 RNGLEGWDSICNT------------MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIA 414
             GLE +D +               ++D+  + G+ + A  + + M     V+ W +L+ 
Sbjct: 378 DKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLG 437

Query: 415 GLIKNGDVESAREV 428
           G     D E    V
Sbjct: 438 GCRIYKDAERGERV 451



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 46/319 (14%)

Query: 16  TVTTLTNQHKAKTTPK-DSPSIGS-LKNCKTLNEL---KQPHCHILKQG----LGHKPSY 66
           T++   NQ      P  D  +  S LK C  L ++   ++ HC + K G    L  + S 
Sbjct: 109 TISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSL 168

Query: 67  IS---KVVCTCAQMGTFESLTY---------------------AQKAFDYYIKDNETSAT 102
           +    KV C C     F+ +                       A+  FD  ++ N  S  
Sbjct: 169 VDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVS-- 226

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVH 161
              ++++I GY+      +AI L+ ++   G L P+  T   VL+AC    A   G  +H
Sbjct: 227 ---WSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIH 283

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             I +   +  +F+ N L + Y +CG +++ + VF EM ER+V+SW+ +I   A      
Sbjct: 284 RFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYAN 343

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----GMKANALMV 277
           EA   F EM+E+G++PN ++ + +++AC    +  L D+   Y D +    G+       
Sbjct: 344 EAFNFFAEMIEDGLEPNDISFMGLLTACT---HAGLVDKGLEYFDMMPQVYGITPKIEHY 400

Query: 278 NALVDMYMKCGAVDTAKQL 296
             +VD+  + G +D A+ L
Sbjct: 401 GCVVDLLSRAGRLDQAESL 419


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/739 (36%), Positives = 400/739 (54%), Gaps = 55/739 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+++ GYS  G    A SL+  +      PD +++  +L+A   SS+  +     G   
Sbjct: 72  YNAMLAGYSANGRLPLAASLFRAIP----RPDNYSYNTLLHALAVSSSLAD---ARGLFD 124

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +M   RD    N +I+ +   G +   R  FD   E++ VSW  ++ A  R    +EA  
Sbjct: 125 EMPV-RDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARG 183

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF          NS T   VIS                              NAL+  Y+
Sbjct: 184 LF----------NSRTEWDVIS-----------------------------WNALMSGYV 204

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G +  A++LF     R++V  N ++S Y R G   EA  + D      P  D  T  +
Sbjct: 205 QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA----APVRDVFTWTA 260

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            VS  AQ G L   R     +       W    N M+  Y++    + A  +F+ M  + 
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSW----NAMVAAYIQRRMMDEAKELFNMMPCRN 316

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V SWN+++ G  + G +E A+ VF  MP +D +SW  ML   +Q    EE ++LF  M  
Sbjct: 317 VASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGR 376

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
               V+R     V S C  + AL+    ++  + + G      +  AL+ M+ +CG+ + 
Sbjct: 377 CGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED 436

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A   F  ME+RDV +W   I   A  G G++A+E+F+ M     KPD I  VGVL ACSH
Sbjct: 437 ARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH 496

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV +G   F SM    GV+ +  HY CM+DLLGRAG L EA DL+K MP EP+  +WG
Sbjct: 497 SGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWG 556

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL A + H+N ++   AAE+I EL+PE +G++VLLSNIYAS+GKW +  ++R+ M+E+G
Sbjct: 557 ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERG 616

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K+PG S IEV  KVH F++GD  HPE   I + L +++ R++ AGYV     VL DV+
Sbjct: 617 VKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVE 676

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+EK+++L +HSEKLA+A+G+++     PIRV+KNLR+C DCH+  K +S +  R I++R
Sbjct: 677 EEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLR 736

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D+NRFH FR GSCSC D+W
Sbjct: 737 DSNRFHHFRGGSCSCGDYW 755



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           AQ G  E    A+  FD   + +  S     + +++  YS  G   E + L++E+   G 
Sbjct: 328 AQAGMLEE---AKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETLQLFIEMGRCGE 379

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
             ++  F  VL+ C   +A   G+Q+HG +++ G+    FV N L+  Y +CG++ D R 
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
            F+EM ER+VVSW ++I   AR    KEA+ +F  M     KP+ +T+V V++AC+    
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499

Query: 255 LELG-DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           +E G     +   + G+ A       ++D+  + G +  A  L
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 114/492 (23%), Positives = 209/492 (42%), Gaps = 90/492 (18%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           ++ T   +  +N+L+ GY   G   EA  L+  + G     D  ++  +++   +     
Sbjct: 186 NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMV 241

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           E  ++  A       RDVF    +++ Y + G + + RRVFD M ERN VSW +++ A  
Sbjct: 242 EARRLFDAAPV----RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 297

Query: 216 RRDLPKEAVYLF--------------------FEMVEEG-------IKPNSVTMVCVISA 248
           +R +  EA  LF                      M+EE         + ++V+   +++A
Sbjct: 298 QRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357

Query: 249 CAK-------LQ-NLELGD--------------RVCAYIDEL--GMKANALMV------- 277
            ++       LQ  +E+G                 CA I  L  GM+ +  ++       
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417

Query: 278 ----NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
               NAL+ MY KCG ++ A+  F E ++R++V  NT+++ Y R G  +EAL I D M  
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQ 391
              +PD +T++  ++A +  G +  G + + Y + +  G+         MID+  + G+ 
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKG-ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRL 536

Query: 392 EMACRIFDHMS-NKTVVSWNSLIAG--LIKNGDV--ESAREVFSEMPGRDHISWNTMLGG 446
             A  +   M        W +L+    + +N ++   +A ++F   P  ++     +L  
Sbjct: 537 AEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEP--ENAGMYVLLSN 594

Query: 447 LTQENMFEEAMELFRVMLSER--IKVDRVTMVGVASACGYLGALDLA----KWIYAYIEK 500
           +   +         RVM+ ER   KV   + + V +      A D      + IYA++E 
Sbjct: 595 IYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLED 654

Query: 501 NGIHCDMQLATA 512
                DM++  A
Sbjct: 655 ----LDMRMKKA 662



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 127/301 (42%), Gaps = 39/301 (12%)

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           S  N M+  Y   G+  +A  +F  +      S+N+L+  L  +  +  AR +F EMP R
Sbjct: 70  STYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR 129

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           D +++N M+       +   A   F +   +    D V+  G+ +A    G ++ A+ ++
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYFDLAPEK----DAVSWNGMLAAYVRNGRVEEARGLF 185

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
                +    D+    AL+  + + G    A ++F RM  RDV +W   +   A  G+  
Sbjct: 186 ----NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMV 241

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS--------- 606
           +A  LF+    +    D   +  V++  +  G++ +   +F +M + + VS         
Sbjct: 242 EARRLFDAAPVR----DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 297

Query: 607 -----------------PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
                              +  +  M+    +AG+L EA  +  +MP + + V W ++LA
Sbjct: 298 QRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLA 356

Query: 650 A 650
           A
Sbjct: 357 A 357



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 110/283 (38%), Gaps = 43/283 (15%)

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV--- 462
           V+  N  I   ++ G V  A  +F+ MP R   ++N ML G +       A  LFR    
Sbjct: 38  VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR 97

Query: 463 ------------------------MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                                   +  E    D VT   + S+    G + LA+  +   
Sbjct: 98  PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLA 157

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            EK+ +  +  LA      + R G  + A  +F    + DV +W A +      G   +A
Sbjct: 158 PEKDAVSWNGMLAA-----YVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEA 212

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
            ELF+ M  + +   +I+  G       G +V       R + D   V   +  +  +V 
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGY---ARRGDMVEA-----RRLFDAAPVR-DVFTWTAVVS 263

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
              + G+L EA  +  +MP E N V W +++AA  + + +D A
Sbjct: 264 GYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDEA 305


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/711 (36%), Positives = 393/711 (55%), Gaps = 47/711 (6%)

Query: 179 LINFYGECGDIVDGRRVFDEMSE--RNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-I 235
           L+  Y   G +      FD + +  R+ V   ++I A AR      AV +F  ++  G +
Sbjct: 94  LVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSL 153

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKC---- 287
           +P+  +   ++SA   L N+ +  R CA +    +K+ A  V    NALV +YMKC    
Sbjct: 154 RPDDYSFTALLSAAGHLPNISV--RHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211

Query: 288 ------------------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
                                         G V  A+ +F E   +  V+ N ++S YV 
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR---NGL-EG 373
            G+  EA  +   M+L     D  T  S +SA A  G    G+  HG + R   N + E 
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + N ++ +Y KCG   +A RIFD+M +K VVSWN++++G +++  ++ A EVF EMP
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
            ++ +SW  M+ G       E+A++LF  M +E +K    T  G  SACG LG+L   K 
Sbjct: 392 YKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQ 451

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++ ++ + G         AL+ M+ARCG  + A  +F  M   D  +W A I A+   G+
Sbjct: 452 LHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGH 511

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G +A+ELF+ M+ +GI PD I F+ VLTAC+H GLV++G+  F SM    G+ P   HY 
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYT 571

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
            ++DLLGRAG +GEA DLIK+MP EP   IW ++L+ C+   ++++ A+AA+++ ++ P+
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G ++LLSN Y++AG+W + ARVR  M+++G++K PG S IE   KVH F  GD  HPE
Sbjct: 632 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPE 691

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
            + +   L  +  R+R  GYVPD   VL D++  +K+++L  HSE+LA+ FGL+      
Sbjct: 692 AHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGA 751

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            + V+KNLR+C DCH+    +SK   REI+VRD  RFH F+ G CSC ++W
Sbjct: 752 TVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 210/467 (44%), Gaps = 68/467 (14%)

Query: 37  GSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY---- 92
           G L N  ++    Q  C +LK G G   S  + +V    +    E+   A+K  D     
Sbjct: 168 GHLPNI-SVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDK 226

Query: 93  -----------YIKDNETSA--TLF---------MYNSLIRGYSCIGLGVEAISLYVELA 130
                      Y++  +  A  ++F         ++N++I GY   G+ VEA  L+  + 
Sbjct: 227 DALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMV 286

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM--GF--DRDVFVENCLINFYGEC 186
              +  D+FTF  VL+AC  +  F  G  VHG I ++   F  +  + V N L+  Y +C
Sbjct: 287 LERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKC 346

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACAR-----------RDLP--------------- 220
           G+I   RR+FD M  ++VVSW +++                 ++P               
Sbjct: 347 GNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYV 406

Query: 221 -----KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                ++A+ LF  M  E +KP   T    ISAC +L +L+ G ++  ++ +LG + +  
Sbjct: 407 HGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNS 466

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
             NAL+ MY +CGAV  A  +F    + + V  N ++S   + G  REAL + D M+  G
Sbjct: 467 AGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEG 526

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMA 394
             PDR++ L+ ++A    G +  G      + R+ G+   +     +ID+  + G+   A
Sbjct: 527 IYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEA 586

Query: 395 CRIFDHMSNKTVVS-WNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
             +   M  +   S W ++++G   +GD+E    +A ++F   P  D
Sbjct: 587 RDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 297/825 (36%), Positives = 416/825 (50%), Gaps = 119/825 (14%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +AIS Y  +   G+ PD F FP VL A         G Q+H  + K G      V N L+
Sbjct: 68  QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           N YG+CGDI   RRVFDE++ R+ VSW S+I A  R +  + AV+LF  M+ E + P S 
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187

Query: 241 TMVCVISACAKLQN-LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           T+V V  AC+ L N L LG +V A++   G        NALV MY K G V  AK LF  
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDV 246

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC- 358
             D++LV  NTI+S+  +     EAL  L  ML  G RP+ VT+ S + A + L  L C 
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306

Query: 359 -----------------------------------GRMCHGYVLRNGLEGWDSICNTMID 383
                                              GR+    + R  +  W    N MI 
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVW----NAMIA 362

Query: 384 MYMKCGKQEMACRIFDHMS-------------------------------NKTVVSW--- 409
            Y++      A  +F  M                                +  VV W   
Sbjct: 363 GYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFE 422

Query: 410 ------NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF--- 460
                 N+L+    + G +E AR +F  M  +D +SWNTM+ G       ++A+ L    
Sbjct: 423 KDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDM 482

Query: 461 -RVMLSERI--------------KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
            R     RI              K + VT++ V   C  L AL   K I+AY  K  +  
Sbjct: 483 QRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSK 542

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D+ + +ALVDM+A+CG    +  VF +M  R+V  W   I A  M G GE+A++LF  M+
Sbjct: 543 DVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMV 602

Query: 566 RQG-----IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
            +G     I+P+ + ++ +  + SH G+V++G +LF +M   HG+ P   HY C+VDLLG
Sbjct: 603 EEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLG 662

Query: 621 RAGLLGEALDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           R+G + EA +LIK+MP     V  W SLL AC+ HQN++I   AA+ +  LDP       
Sbjct: 663 RSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP------- 715

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
              N+     K + + R   +MKE+G+RK PG S IE   +VH+F +GD SHP+   +  
Sbjct: 716 ---NVLDYGTKQSMLGR---KMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHE 769

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L  ++ R++  GYVPD + VL +V E+EK+ +L  HSE+LA+AFGL++TS    IRV K
Sbjct: 770 YLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAK 829

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH   K +SK+ DREII+RD  RFH FR G+CSC D+W
Sbjct: 830 NLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 36/247 (14%)

Query: 440 WNTMLGGLTQEN-MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           W + L   TQ +  F +A+  +  M++  +  D      V  A   +  L+L K ++A++
Sbjct: 52  WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K G      +  +LV+M+ +CGD   A +VF  +  RD  +W + I A       E AV
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSH--GGLV-----------NQGWHLF--------- 596
            LF  ML + + P S   V V  ACS+   GL+           N  W  F         
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMY 231

Query: 597 ---------RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIW 644
                    +++ D+      +V +  ++  L +     EAL  +  M    V PN V  
Sbjct: 232 AKLGRVYEAKTLFDVFD-DKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTL 290

Query: 645 GSLLAAC 651
            S+L AC
Sbjct: 291 ASVLPAC 297


>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/553 (40%), Positives = 346/553 (62%), Gaps = 1/553 (0%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F + ++ NL + N ++  +       +A     +ML     PD +T    + AS +
Sbjct: 72  AYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTE 131

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           +  ++ G   H  ++R G +    + N+++ MY  CG    A RIF  M  + VVSW S+
Sbjct: 132 MECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSM 191

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           +AG  K G VE ARE+F EMP R+  +W+ M+ G  + N FE+A++LF +M  E +  + 
Sbjct: 192 VAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANE 251

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
             MV V S+C +LGAL+  +  + Y+ K+ +  ++ L TALVDM+ RCG+ ++A++VF  
Sbjct: 252 TVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEE 311

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +  +D  +W++ I  +A+ G+  +A+  F++M+R G  P  I    VL+ACSHGGLV++G
Sbjct: 312 LPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKG 371

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
             ++ +M   +G+ P++ HYGC+VD+LGRAG L EA + I  MPV+PN  I G+LL AC+
Sbjct: 372 LEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACK 431

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            ++N ++A      + E+ PE SG +VLLSNIYA AG+W  +  +R  MKE+ ++K PG 
Sbjct: 432 IYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGW 491

Query: 713 SSIEVNGKVHEFTSG-DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
           S IE++GK+++F+ G D+ HPEM  I  +  E+  ++R  GY  +  +   DVDE+EK+ 
Sbjct: 492 SLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKET 551

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
            +  HSEKLA+A+G++ T     IR+VKNLR+C DCH+  KL+S+VY RE IVRD NRFH
Sbjct: 552 AIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRFH 611

Query: 832 FFRQGSCSCSDFW 844
            FR G CSC D+W
Sbjct: 612 HFRNGLCSCRDYW 624



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 181/377 (48%), Gaps = 45/377 (11%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCT--CAQMGTFESLTYAQKAFD 91
           P +  L++C + ++LK  H  +L+  L       S+++    C    TF   T     + 
Sbjct: 14  PKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLL-GYA 72

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           Y I     +  LF++N LIR +S      +A   Y ++    I PD  TFPF++ A T+ 
Sbjct: 73  YGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEM 132

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
                G Q H  IV+ GF  DV+VEN L++ Y  CG I    R+F +M  R+VVSWTS++
Sbjct: 133 ECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMV 192

Query: 212 ---CAC----------------------------ARRDLPKEAVYLFFEMVEEGIKPNSV 240
              C C                            A+ +  ++A+ LF  M  EG+  N  
Sbjct: 193 AGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANET 252

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
            MV VIS+CA L  LE G+R   Y+ +  M  N ++  ALVDMY +CG ++ A ++F E 
Sbjct: 253 VMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEEL 312

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            D++ +  ++I+      G A +A+    +M+  G  P  +T+ + +SA +         
Sbjct: 313 PDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACS--------- 363

Query: 361 MCHGYVLRNGLEGWDSI 377
             HG ++  GLE ++++
Sbjct: 364 --HGGLVDKGLEIYENM 378



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/504 (23%), Positives = 216/504 (42%), Gaps = 87/504 (17%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI---------NFYGECGDIVDGRR 194
           +L +C   S+F +   +HG +++     DVFV + L+          F+     +     
Sbjct: 18  LLQSC---SSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYG 74

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F ++   N+  +  LI   +    P +A   + +M++  I P+++T   +I A  +++ 
Sbjct: 75  IFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMEC 134

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           + +G++  + I   G + +  + N+LV MY  CG +  A ++FG+   R++V   ++++ 
Sbjct: 135 VVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAG 194

Query: 315 YVRLGLAREALAILDEM-------------------------------LLHGPRPDRVTM 343
           Y + G+  +A  + DEM                                  G   +   M
Sbjct: 195 YCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVM 254

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S +S+ A LG L  G   H YV+++ +     +   ++DMY +CG+ E A R+F+ + +
Sbjct: 255 VSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPD 314

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K  +SW+S+I GL  +G    A   FS+M                            R+ 
Sbjct: 315 KDSLSWSSIIKGLAVHGHAHKAIHYFSQM---------------------------VRLG 347

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGD 522
            S R     +T+  V SAC + G +D    IY  ++++ GI   ++    +VDM  R G 
Sbjct: 348 FSPR----DITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGK 403

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS---IVFVG 578
              A     +M  K +     A +GA  +  N E A  + N ++   +KP+     V + 
Sbjct: 404 LAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIE--VKPEHSGYYVLLS 461

Query: 579 VLTACSHGGLVNQGWHLFRSMTDI 602
            + AC+        W    S+ DI
Sbjct: 462 NIYACA------GQWEKLESLRDI 479



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 41/236 (17%), Positives = 90/236 (38%), Gaps = 68/236 (28%)

Query: 57  KQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET------SATLFMY---- 106
           ++G+    + +  V+ +CA +G  E   + ++A +Y +K + T      +A + MY    
Sbjct: 244 REGVVANETVMVSVISSCAHLGALE---FGERAHEYVVKSHMTVNLILGTALVDMYWRCG 300

Query: 107 --------------------NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
                               +S+I+G +  G   +AI  + ++   G  P   T   VL+
Sbjct: 301 EIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLS 360

Query: 147 ACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           AC+      +G++++  + +  G +  +    C+++  G  G + +      +M      
Sbjct: 361 ACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMP----- 415

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
                                        +KPN+  +  ++ AC   +N E+ +RV
Sbjct: 416 -----------------------------VKPNAPILGALLGACKIYKNTEVAERV 442


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/739 (36%), Positives = 401/739 (54%), Gaps = 55/739 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+++ GYS  G    A SL+  +      PD +++  +L+A   SS+  +     G   
Sbjct: 72  YNAMLAGYSANGRLPLAASLFRAIP----RPDNYSYNTLLHALAVSSSLAD---ARGLFD 124

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +M   RD    N +I+ +   G +   R  FD   E++ VSW  ++ A  R    +EA  
Sbjct: 125 EMPV-RDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARG 183

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF          NS T                             + +A+  NAL+  Y+
Sbjct: 184 LF----------NSRT-----------------------------EWDAISWNALMSGYV 204

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G +  A++LF     R++V  N ++S Y R G   EA  + D      P  D  T  +
Sbjct: 205 QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA----APVRDVFTWTA 260

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            VS  AQ G L   R     +       W    N M+  Y++    + A  +F+ M  + 
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSW----NAMVAAYIQRRMMDEAKELFNMMPCRN 316

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V SWN+++ G  + G +E A+ VF  MP +D +SW  ML   +Q    EE ++LF  M  
Sbjct: 317 VASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGR 376

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
               V+R     V S C  + AL+    ++  + + G      +  AL+ M+ +CG+ + 
Sbjct: 377 CGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED 436

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A   F  ME+RDV +W   I   A  G G++A+E+F+ M     KPD I  VGVL ACSH
Sbjct: 437 ARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH 496

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV +G   F SM    GV+ +  HY CM+DLLGRAG L EA DL+K MP EP+  +WG
Sbjct: 497 SGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWG 556

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL A + H+N ++   AAE+I EL+PE +G++VLLSNIYAS+GKW +  ++R+ M+E+G
Sbjct: 557 ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERG 616

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K+PG S IEV  KVH F++GD  HPE   I + L +++ R++ AGYV     VL DV+
Sbjct: 617 VKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVE 676

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+EK+++L +HSEKLA+A+G+++     PIRV+KNLR+C DCH+  K +S +  R I++R
Sbjct: 677 EEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLR 736

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D+NRFH FR GSCSC D+W
Sbjct: 737 DSNRFHHFRGGSCSCGDYW 755



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           AQ G  E    A+  FD   + +  S     + +++  YS  G   E + L++E+   G 
Sbjct: 328 AQAGMLEE---AKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETLQLFIEMGRCGE 379

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
             ++  F  VL+ C   +A   G+Q+HG +++ G+    FV N L+  Y +CG++ D R 
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
            F+EM ER+VVSW ++I   AR    KEA+ +F  M     KP+ +T+V V++AC+    
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499

Query: 255 LELG-DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           +E G     +   + G+ A       ++D+  + G +  A  L
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 114/492 (23%), Positives = 208/492 (42%), Gaps = 90/492 (18%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           ++ T      +N+L+ GY   G   EA  L+  + G     D  ++  +++   +     
Sbjct: 186 NSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMV 241

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           E  ++  A       RDVF    +++ Y + G + + RRVFD M ERN VSW +++ A  
Sbjct: 242 EARRLFDAAPV----RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 297

Query: 216 RRDLPKEAVYLF--------------------FEMVEEG-------IKPNSVTMVCVISA 248
           +R +  EA  LF                      M+EE         + ++V+   +++A
Sbjct: 298 QRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357

Query: 249 CAK-------LQ-NLELGD--------------RVCAYIDEL--GMKANALMV------- 277
            ++       LQ  +E+G                 CA I  L  GM+ +  ++       
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417

Query: 278 ----NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
               NAL+ MY KCG ++ A+  F E ++R++V  NT+++ Y R G  +EAL I D M  
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQ 391
              +PD +T++  ++A +  G +  G + + Y + +  G+         MID+  + G+ 
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKG-ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRL 536

Query: 392 EMACRIFDHMS-NKTVVSWNSLIAG--LIKNGDV--ESAREVFSEMPGRDHISWNTMLGG 446
             A  +   M        W +L+    + +N ++   +A ++F   P  ++     +L  
Sbjct: 537 AEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEP--ENAGMYVLLSN 594

Query: 447 LTQENMFEEAMELFRVMLSER--IKVDRVTMVGVASACGYLGALDLA----KWIYAYIEK 500
           +   +         RVM+ ER   KV   + + V +      A D      + IYA++E 
Sbjct: 595 IYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLED 654

Query: 501 NGIHCDMQLATA 512
                DM++  A
Sbjct: 655 ----LDMRMKKA 662



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 126/301 (41%), Gaps = 39/301 (12%)

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           S  N M+  Y   G+  +A  +F  +      S+N+L+  L  +  +  AR +F EMP R
Sbjct: 70  STYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR 129

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           D +++N M+       +   A   F +   +    D V+  G+ +A    G ++ A+ ++
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYFDLAPEK----DAVSWNGMLAAYVRNGRVEEARGLF 185

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
                +    D     AL+  + + G    A ++F RM  RDV +W   +   A  G+  
Sbjct: 186 ----NSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMV 241

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS--------- 606
           +A  LF+    +    D   +  V++  +  G++ +   +F +M + + VS         
Sbjct: 242 EARRLFDAAPVR----DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 297

Query: 607 -----------------PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
                              +  +  M+    +AG+L EA  +  +MP + + V W ++LA
Sbjct: 298 QRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLA 356

Query: 650 A 650
           A
Sbjct: 357 A 357


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/751 (34%), Positives = 404/751 (53%), Gaps = 34/751 (4%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           +Y+        LF +N L+ GY+  GL  EA+ LY  +   G+ PD +TFP VL  C   
Sbjct: 161 WYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGM 220

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
                G ++H  +++ GF+ DV V N LI  Y +CGD+   R VFD+M  R+ +SW ++I
Sbjct: 221 PNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMI 280

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
                  +  E + LF  M++  + P+ +TM  VI+AC  L +  LG ++  Y+      
Sbjct: 281 SGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFG 340

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            +  + N+L+ MY   G ++ A+ +F   + R+LV    ++S Y    + ++AL     M
Sbjct: 341 RDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMM 400

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
              G  PD +T+   +SA + L +L  G   H    + GL  +  + N++IDMY KC   
Sbjct: 401 EAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKC--- 457

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
              C                          ++ A E+F     ++ +SW +++ GL   N
Sbjct: 458 --KC--------------------------IDKALEIFHSTLEKNIVSWTSIILGLRINN 489

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  FR M+  R+K + VT+V V SAC  +GAL   K I+A+  + G+  D  +  
Sbjct: 490 RCFEALFFFREMI-RRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPN 548

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           A++DM+ RCG  + A + F  ++  +V++W   +   A  G G  A ELF  M+   + P
Sbjct: 549 AILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVESNVSP 607

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           + + F+ +L ACS  G+V +G   F SM   + + P + HY C+VDLLGR+G L EA + 
Sbjct: 608 NEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEF 667

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I+ MP++P+  +WG+LL +C+ H +V++   AAE I + D    G ++LLSN+YA  GKW
Sbjct: 668 IQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKW 727

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             VA VR  M++ G+   PG S +EV G VH F S D  HP++  I+++L     ++++A
Sbjct: 728 DKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEA 787

Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           G V    +  +D+ E  K  +   HSE+LA+ FGLI++   MPI V KNL +C  CH+  
Sbjct: 788 G-VEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIV 846

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           K +S+   REI VRD  +FH F+ G CSC+D
Sbjct: 847 KFISREVRREISVRDAEQFHHFKGGICSCTD 877



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 206/442 (46%), Gaps = 36/442 (8%)

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECK 301
           V +I  C   +  + G RV +Y+  + M   +L + NAL+ M+++ G +  A  +FG  +
Sbjct: 110 VALIRLCEWKRARKEGSRVYSYVS-ISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRME 168

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
            RNL   N ++  Y + GL  EAL +   ML  G +PD  T    +     + +L+ GR 
Sbjct: 169 KRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGRE 228

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H +V+R G E    + N +I MY+KCG    A  +FD M N+  +SWN++I+G  +NG 
Sbjct: 229 IHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENG- 287

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
                                         +  E + LF +M+   +  D +TM  V +A
Sbjct: 288 ------------------------------VCLEGLRLFGMMIKYPVDPDLMTMTSVITA 317

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  LG   L + I+ Y+ +     D  +  +L+ M++  G  + A  VF R E RD+ +W
Sbjct: 318 CELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSW 377

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           TA I         ++A+E +  M  +GI PD I    VL+ACS    ++ G +L      
Sbjct: 378 TAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQ 437

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ-KHQNVDIA 660
              VS  IV    ++D+  +   + +AL++  S  +E N V W S++   +  ++  +  
Sbjct: 438 KGLVSYSIVA-NSLIDMYAKCKCIDKALEIFHST-LEKNIVSWTSIILGLRINNRCFEAL 495

Query: 661 AYAAERITELDPEKSGVHVLLS 682
            +  E I  L P    +  +LS
Sbjct: 496 FFFREMIRRLKPNSVTLVCVLS 517



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
           HI    +LG L      + AM     M   RI V+    V +   C +  A      +Y+
Sbjct: 77  HIYQLCLLGNL------DRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYS 130

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           Y+  +  H  +QL  AL+ MF R G+   A  VF RMEKR++ +W   +G  A  G  ++
Sbjct: 131 YVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDE 190

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           A++L++ ML  G+KPD   F  VL  C  GG+ N
Sbjct: 191 ALDLYHRMLWVGVKPDVYTFPCVLRTC--GGMPN 222


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/675 (37%), Positives = 397/675 (58%), Gaps = 49/675 (7%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R+    N +I+ Y + G + D R+VFD M ERNVVSWTS++    +  + +EA  LF+EM
Sbjct: 81  RNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEM 140

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
                + N V+   +I    K   ++   ++   I E     + ++V  ++  Y + G +
Sbjct: 141 P----RRNVVSWTVMIGGLLKESRIDDAKKLFDMIPE----KDVVVVTNMIGGYCQVGRL 192

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           D A++LF E K RN+    T++S Y + G    A  + + M      P+R    + VS +
Sbjct: 193 DEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM------PER----NEVSWT 242

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           A                             M+  Y + G+ + A  +F+ M  K +V+ N
Sbjct: 243 A-----------------------------MLMGYTQSGRMKEAFELFEAMPVKWIVACN 273

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
            +I      G++  AR +F  M  RD  +WN M+    ++ +  EA+ LF  M  E + +
Sbjct: 274 EMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVAL 333

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           +  +M+ V S C  L +LD  + ++A + ++    D+ +A+ L+ M+ +CGD  RA  +F
Sbjct: 334 NFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIF 393

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
            R   +DV  W + I   +  G GE+A+ +F++M   G++PD + F+GVL+ACS+ G V 
Sbjct: 394 NRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVK 453

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G+ +F +M   + V P I HY CMVDLLGRAG + EA++L++ MP+EP+ ++WG+LL A
Sbjct: 454 EGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGA 513

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H  +D+A  A E++ +L+P+ +G +VLLS++YA+ G+W +V  +R ++  + I K P
Sbjct: 514 CRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVI-KFP 572

Query: 711 GSSSIEVNGKVHEFTSGD-ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           G S IEV  KVH FT GD +SHPE + I+ ML +++  LR+AGY PD + VL DVDE+EK
Sbjct: 573 GCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEK 632

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
            + L +HSE+LA+A+GL+   + MPIRV+KNLR+C DCHS  KL++KV  REII+RD NR
Sbjct: 633 THSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANR 692

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+ GSCSC DFW
Sbjct: 693 FHHFKDGSCSCKDFW 707



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 109/196 (55%), Gaps = 9/196 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I+ +   GL +EA+ L+  +   G+  +  +   VL+ C   ++   G QVH  +V
Sbjct: 303 WNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLV 362

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +  FD+D++V + LI  Y +CGD+V  + +F+    ++VV W S+I   ++  L +EA+ 
Sbjct: 363 RSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALN 422

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV-----CAYIDELGMKANALMVNAL 280
           +F +M   G++P+ VT + V+SAC+    ++ G  +     C Y  E G++  A M    
Sbjct: 423 VFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACM---- 478

Query: 281 VDMYMKCGAVDTAKQL 296
           VD+  + G VD A +L
Sbjct: 479 VDLLGRAGRVDEAMEL 494



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 16/188 (8%)

Query: 34  PS-IGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKA 89
           PS I  L  C +L  L   +Q H  +++          S ++    + G    L  A+  
Sbjct: 336 PSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCG---DLVRAKGI 392

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F+ ++  +     + M+NS+I GYS  GLG EA++++ ++   G+ PD+ TF  VL+AC+
Sbjct: 393 FNRFLFKD-----VVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACS 447

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ERNVVS 206
            S    EG ++  A+ K  +  +  +E+  C+++  G  G + +   + ++M  E + + 
Sbjct: 448 YSGKVKEGFEIFEAM-KCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIV 506

Query: 207 WTSLICAC 214
           W +L+ AC
Sbjct: 507 WGALLGAC 514



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 25/259 (9%)

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF--SEMPGRDHISWNTMLGGLTQE 450
           + CR+   +  +++ S  S I+   + GD+ +AR+VF  + +P R   SWN M+    + 
Sbjct: 9   LRCRM---VQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFES 65

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQL 509
           +   +A+ LF  M       + V+  G+ S     G +  A+ ++  + E+N +      
Sbjct: 66  HKPRDALLLFDQMPQR----NTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSW---- 117

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
            T++V  + + G  + A ++F  M +R+V +WT  IG +  E   + A +LF+ +  +  
Sbjct: 118 -TSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEK-- 174

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
             D +V   ++      G +++   LF  M         +  +  MV    + G +  A 
Sbjct: 175 --DVVVVTNMIGGYCQVGRLDEARELFDEMK-----VRNVFTWTTMVSGYAKNGRVDVAR 227

Query: 630 DLIKSMPVEPNDVIWGSLL 648
            L + MP E N+V W ++L
Sbjct: 228 KLFEVMP-ERNEVSWTAML 245


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 279/807 (34%), Positives = 420/807 (52%), Gaps = 69/807 (8%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           N ++  Y+  G+  E +  +      G+L D  T   VL AC        G Q+H   VK
Sbjct: 68  NRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 167 MGFDR-DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
            G DR +V     L++ Y +CG + +G  VF+ M ++NVV+WTSL+  CA   +  E + 
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LFF M  EGI PN  T   V+SA A    L+LG RV A   + G +++  + N+L++MY 
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG V+ AK +F   + R++V  NT+M+         EAL +  E      +  + T  +
Sbjct: 248 KCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NK 404
            +   A L  L   R  H  VL++G     ++   + D Y KCG+   A  IF   + ++
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEM-----------------------PGRDH---I 438
            VVSW ++I+G I+NGD+  A  +FS M                       P + H   I
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVI 427

Query: 439 SWN---------TMLGGLTQENMFEEAMELFRV-----------MLS------------- 465
             N          +L   ++    E+A+ +F++           MLS             
Sbjct: 428 KTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATY 487

Query: 466 -------ERIKVDRVTMVGVASACGYLGA-LDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
                  + IK +  T+  V  AC    A +D  +  +A   K   H  + +++ALV M+
Sbjct: 488 LFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMY 547

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           +R G+   A  VF R   RD+ +W + I   A  G   +A+E F +M   GI+ D + F+
Sbjct: 548 SRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFL 607

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            V+  C+H GLV +G   F SM   H ++P + HY CMVDL  RAG L E + LI+ MP 
Sbjct: 608 AVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPF 667

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
               ++W +LL AC+ H+NV++  ++A+++  L+P  S  +VLLSNIYA+AGKW     V
Sbjct: 668 PAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEV 727

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  M  + ++K  G S I++  KVH F + D+SHP  + I   L+ +  RL+  GY P+ 
Sbjct: 728 RKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNT 787

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
           + VL D+ E +K+ +L  HSE+LA+AFGLI+T    P+++VKNLR+C DCH   K+VS +
Sbjct: 788 SFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMI 847

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DREII+RD +RFH F  G+CSC DFW
Sbjct: 848 EDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 16/253 (6%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H  ++K    H PS  + ++ + ++ G+ E      K     I+  +  A   M +  
Sbjct: 421 QIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFK----MIEQKDVVAWSAMLSCH 476

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT-KSSAFGEGVQVHGAIVKMG 168
            +   C G    A  L+ ++A  GI P++FT   V++AC   S+   +G Q H   +K  
Sbjct: 477 AQAGDCEG----ATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           +   + V + L++ Y   G+I   + VF+  ++R++VSW S+I   A+     +A+  F 
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL--GMKANALMVN--ALVDMY 284
           +M   GI+ + VT + VI  C     +  G +   Y D +    K N  M +   +VD+Y
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ---YFDSMVRDHKINPTMEHYACMVDLY 649

Query: 285 MKCGAVDTAKQLF 297
            + G +D    L 
Sbjct: 650 SRAGKLDETMSLI 662


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/603 (39%), Positives = 343/603 (56%), Gaps = 32/603 (5%)

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           MV ++ ACA   ++ LG  V     +  +       N L+DMY KCG +D A  +F    
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
            R +V   ++++ Y R GL+ EA+ +  EM   G  PD  T+ + + A A  G L  G+ 
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H Y+  N ++    +CN ++DMY KCG                                
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCG-------------------------------S 149

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           +E A  VF EMP +D ISWNTM+GG ++ ++  EA+ LF  M+ E +K D  T+  +  A
Sbjct: 150 MEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPA 208

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  L +LD  K ++ +I +NG   D Q+A ALVDM+ +CG P  A  +F  +  +D+  W
Sbjct: 209 CASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITW 268

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           T  I    M G G  A+  FNEM + GI+PD + F+ +L ACSH GL+++GW  F  M D
Sbjct: 269 TVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQD 328

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
              V P++ HY C+VDLL R+G L  A   IKSMP+EP+  IWG+LL+ C+ H +V +A 
Sbjct: 329 ECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAE 388

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
             AE + EL+PE +G +VLL+N YA A KW  V ++R ++  +G++K PG S IEV  KV
Sbjct: 389 KVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKV 448

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           H F +G+ SHP+   I  +L+ +  ++++ GY P     L++ D  +K+  L  HSEKLA
Sbjct: 449 HIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLA 508

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           MAFG+++      IRV KNLR+C DCH  AK +SK   REI++RD+NRFH F+ G C C 
Sbjct: 509 MAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCR 568

Query: 842 DFW 844
            FW
Sbjct: 569 GFW 571



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 215/437 (49%), Gaps = 12/437 (2%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L AC        G  VHG+ VK          N L++ Y +CG +     VFD MS R 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VV+WTSLI A AR  L  EA+ LF EM  EG+ P+  T+  V+ ACA   +LE G  V  
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           YI E  M++N  + NAL+DMY KCG+++ A  +F E   ++++  NT++  Y +  L  E
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL++  +M+L   +PD  T+   + A A L  L  G+  HG++LRNG      + N ++D
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHIS 439
           MY+KCG   +A  +FD +  K +++W  +IAG   +G   +A   F+EM       D +S
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           + ++L   +   + +E    F VM  E  +K        +       G L +A   Y +I
Sbjct: 303 FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMA---YKFI 359

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR---MEKRDVSAWTAAIGAMAMEGNGE 555
           +   I  D  +  AL+       D + A +V      +E  +   +       A     E
Sbjct: 360 KSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWE 419

Query: 556 QAVELFNEMLRQGIKPD 572
           +  +L  ++ R+G+K +
Sbjct: 420 EVKKLRQKIGRRGLKKN 436



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 171/333 (51%), Gaps = 11/333 (3%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T+  + SLI  Y+  GL  EAI L+ E+   G+ PD FT   VL+AC  + +   G  VH
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             I +     ++FV N L++ Y +CG + D   VF EM  ++++SW ++I   ++  LP 
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ LF +MV E +KP+  T+ C++ ACA L +L+ G  V  +I   G  ++  + NALV
Sbjct: 183 EALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY+KCG    A+ LF     ++L+    +++ Y   G    A+   +EM   G  PD V
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYV-----LRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           + +S + A +  G L  G      +     ++  LE +  I    +D+  + GK  MA +
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACI----VDLLARSGKLAMAYK 357

Query: 397 IFDHMS-NKTVVSWNSLIAGLIKNGDVESAREV 428
               M        W +L++G   + DV+ A +V
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKV 390


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/652 (36%), Positives = 381/652 (58%), Gaps = 33/652 (5%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQ 253
           VF      +V++W S++ A    ++P+ A+  + EM+E     P+  T   ++  CA L 
Sbjct: 34  VFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
             ++G  +   + +  + ++  +   L++MY  CG + +A+ LF     RN V+  +++S
Sbjct: 94  EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y++     EAL +  +M   G  PD VTM + VSA A+L DL  G   H ++    ++ 
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKI 213

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + + +++MY KCG                               D+++AR+VF ++ 
Sbjct: 214 CAVLGSALVNMYAKCG-------------------------------DLKTARQVFDQLS 242

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFR-VMLSERIKVDRVTMVGVASACGYLGALDLAK 492
            +D  +W+ ++ G  + N   EA++LFR V     ++ + VT++ V SAC  LG L+  +
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
           W++ YI +      + L  +L+DMF++CGD   A ++F  M  +D+ +W + +  +A+ G
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHG 362

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G +A+  F+ M    ++PD I F+GVLTACSH GLV +G  LF  +  ++GV  +  HY
Sbjct: 363 LGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY 422

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GCMVDLL RAGLL EA + I+ MP++P+  IWGS+L AC+ + N+++   AA  + EL+P
Sbjct: 423 GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEP 482

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
              GV++LLSNIYA    W  V +VR  M E+GI+K PG SS+ ++   H F +GD SHP
Sbjct: 483 TNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHP 542

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           E+  IS MLR++  +L+  GYV D + VLL++D+ +K+  +S HSEKLA+ +GL+ +   
Sbjct: 543 EIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIG 602

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             I ++KNLR+C DCH+  KLVSK+Y R+I +RD NRFH F+ GSCSC D+W
Sbjct: 603 GRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/510 (32%), Positives = 266/510 (52%), Gaps = 45/510 (8%)

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
           HKPS ++K++     MG+   + YA   F +          +  +NS++R +    +   
Sbjct: 9   HKPS-LNKLIAHVLSMGSL-GVGYAYSVFAH-----TRVLDVLTWNSMLRAFVNSNMPRR 61

Query: 122 AISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           A+  Y E L     +PD+FTFP +L  C     F  G  +HG +VK     D+++E  L+
Sbjct: 62  ALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLL 121

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           N Y  CGD+   R +F+ M  RN V WTS+I    +   P EA+ L+ +M E+G  P+ V
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           TM  ++SACA+L++L +G ++ ++I E+ MK  A++ +ALV+MY KCG + TA+Q+F + 
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQL 241

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCG 359
            D+++   + ++  YV+   + EAL +  E+      RP+ VT+L+ +SA AQLGDL  G
Sbjct: 242 SDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R  H Y+ R       S+ N++IDM+ KCG  + A RIFD MS K ++SWNS++ GL  +
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALH 361

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G                       LG         EA+  F +M +  ++ D +T +GV 
Sbjct: 362 G-----------------------LG--------REALAQFHLMQTTDLQPDEITFIGVL 390

Query: 480 SACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRD 537
           +AC + G +   K ++  IE   G+    +    +VD+  R G    A +  R M  + D
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 538 VSAWTAAIGAMAMEGN---GEQAVELFNEM 564
            + W + +GA  +  N   GE+A     E+
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARCLLEL 480



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 408 SWNSLIAGLIKNGD--VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           S N LIA ++  G   V  A  VF+     D ++WN+ML      NM   A++ +  ML 
Sbjct: 12  SLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71

Query: 466 ERIKV-DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
               V DR T   +   C  L    + K ++  + K  +H D+ + T L++M+A CGD +
Sbjct: 72  RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A  +F RM  R+   WT+ I          +A+ L+ +M   G  PD +    +++AC+
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 288/872 (33%), Positives = 448/872 (51%), Gaps = 80/872 (9%)

Query: 43  KTLNELKQPHCHILKQGLGH-KPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           ++L   K   C I    LG+ KP++  ++ C  A   +   L YA   FD     +  S 
Sbjct: 11  QSLENFKLKFC-IYANELGNLKPNF--RIYCFGAASSS--RLYYAHNLFDKSPDRDRES- 64

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               Y SL+ G+S  G   EA  L++ +   G+  D   F  VL           G Q+H
Sbjct: 65  ----YTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLH 120

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
              +K GF  DV V   L++ Y +  +  DGR VFDEM ERNVV+WT+LI   AR  L +
Sbjct: 121 CQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNE 180

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           E + LF  M +EG +PNS T    +   A+      G +V   + + G+     + N+L+
Sbjct: 181 EVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLI 240

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           ++Y+KCG V  A+ LF + + +++V  N+++S Y   GL  EAL +   M L+  R    
Sbjct: 241 NLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSES 300

Query: 342 TMLSAVSASAQLGDLL------CGRMCHGYV----LRNGLEGWDSICNTMIDM------- 384
           +  S +   A L +L       C  + +G+V    +R  L    S C  M+D        
Sbjct: 301 SFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKET 360

Query: 385 ---------------YMKCGKQEMACRIFDHMSNK------------------------- 404
                          +++   +E A  +F  M  K                         
Sbjct: 361 GFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVH 420

Query: 405 -TVVSWN---------SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
             VV  N         +L+   +K G V+ A +VFS +  +D ++W+ ML G  Q    E
Sbjct: 421 AQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETE 480

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGA-LDLAKWIYAYIEKNGIHCDMQLATAL 513
            A+++F  +    +K +  T   + + C    A +   K  + +  K+ +   + +++AL
Sbjct: 481 AAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSAL 540

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           + M+A+ G  + A +VF+R  ++D+ +W + I   A  G   +A+++F EM ++ +K DS
Sbjct: 541 LTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDS 600

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           + F+GV  AC+H GLV +G   F  M     ++P   H  CMVDL  RAG L +A+ +I 
Sbjct: 601 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVID 660

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           +MP      IW ++LAAC+ H+  ++   AAE+I  + PE S  +VLLSN+YA +G W  
Sbjct: 661 NMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQE 720

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
            A+VR  M E+ ++K PG S IEV  K + F +GD SHP  + I   L +++ RL+D GY
Sbjct: 721 RAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGY 780

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
            PD + VL D+D++ K+ +L+ HSE+LA+AFGLI+T K  P+ ++KNLR+C DCH   KL
Sbjct: 781 EPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKL 840

Query: 814 VSKVYDREIIVRDNNRFHFFRQ-GSCSCSDFW 844
           ++K+ +REI+VRD+NRFH F   G CSC DFW
Sbjct: 841 IAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/829 (33%), Positives = 431/829 (51%), Gaps = 75/829 (9%)

Query: 85  YAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
           YA + FD   +KD      +  YN L+  +S      EA+ L+ +L   G+  D  T   
Sbjct: 56  YAHQLFDETPLKD------ISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSC 109

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
            L  C        G QVH   +K GF  DV V   L++ Y +  D  DGR +FDEM  +N
Sbjct: 110 ALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKN 169

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSWTSL+   AR  L  E ++L  +M  EG+ PN  T   V+ A A    +E G +V A
Sbjct: 170 VVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHA 229

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            I + G +    + NAL+ MY+K   V  A+ +F     R+ V  N ++  Y  +G   E
Sbjct: 230 MIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLE 289

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI------ 377
              +   M L G +  R    +A+   +Q  +L   +  H  V++NG E    I      
Sbjct: 290 GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349

Query: 378 ----CNT----------------------MIDMYMKCGKQEMACRIFDHMSNKTV----V 407
               C++                      MI  +++    E A  +F  MS + V     
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHF 409

Query: 408 SWNSLIAG-------------------------------LIKNGDVESAREVFSEMPGRD 436
           ++++++AG                                +K G+V  +  VF  +P +D
Sbjct: 410 TYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA-LDLAKWIY 495
            ++W+ ML GL Q    E+AME+F  ++ E +K +  T   V +AC    A ++  K I+
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           A   K+G    + +++AL+ M+++ G+ + A +VF R E+RD+ +W + I      G+ +
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+E+F  M  QG+  D + F+GVLTAC+H GLV +G   F  M   + +  +I HY CM
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCM 649

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDL  RAG+  +A+D+I  MP   +  IW +LLAAC+ H+N+++   AAE++  L P  +
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
             +VLLSNI+A AG W   A VR  M E+ ++K  G S IE+  ++  F +GD SHP  +
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSD 769

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            + + L E++ +L+D GY PD   V  DV+E+ K+ +LS HSE+LA+A+GLI+     PI
Sbjct: 770 LVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPI 829

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++ KNLR+C DCH+  +L+S + +R +IVRD+NRFH F+ G CSC  +W
Sbjct: 830 QIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 203/391 (51%), Gaps = 31/391 (7%)

Query: 38  SLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           +LK C   + LN  KQ HC ++K G      Y        A M T+   +   +AF  + 
Sbjct: 312 ALKLCSQQRELNFTKQLHCGVVKNG------YEFAQDIRTALMVTYSKCSSVDEAFKLF- 364

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
              + +  +  + ++I G+       +A+ L+ +++  G+ P+ FT+  VL A   SS  
Sbjct: 365 SMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL-AGKPSSLL 423

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
               Q+H  I+K  +++   V   L++ Y + G++V+  RVF  +  +++V+W++++   
Sbjct: 424 S---QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGL 480

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQNLELGDRVCAYIDELGMKAN 273
           A+    ++A+ +F ++V+EG+KPN  T   VI+AC +    +E G ++ A   + G K+N
Sbjct: 481 AQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSG-KSN 539

Query: 274 ALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           AL V +AL+ MY K G +++A+++F   ++R++V  N++++ Y + G A++AL +   M 
Sbjct: 540 ALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQ 599

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMK 387
             G   D VT +  ++A    G +  G      M   Y +   +E +    + M+D+Y +
Sbjct: 600 NQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHY----SCMVDLYSR 655

Query: 388 CGKQEMACRIFDHM---SNKTVVSWNSLIAG 415
            G  + A  I + M   ++ T+  W +L+A 
Sbjct: 656 AGMFDKAMDIINGMPFPASPTI--WRTLLAA 684


>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
 gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/617 (39%), Positives = 367/617 (59%), Gaps = 18/617 (2%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKA---NALMVNALVDMYMKCGAVDTAKQLFGEC- 300
           ++ +CA+  +L  G ++ A I   G+ +   N  ++NAL  +Y  CG   +A+ LF +  
Sbjct: 21  LLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIP 80

Query: 301 -KDRNLVLCNTIMSNYVRLGL-AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
              +++    T++++ V+ G    E      EM   G   D V M+S      ++ DL  
Sbjct: 81  RSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGM 140

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           GR   G +++ GL     +CN +++MY+KCG  E   R+F  M+ + VVSW++L+ G++K
Sbjct: 141 GRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVK 200

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF-RVMLSERIKVDRVTMVG 477
              VE+ R VF EMP R+ + W  M+ G        E   L   ++L  R+ ++ VT+  
Sbjct: 201 WEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSS 260

Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
           + SAC   G + + +W++ Y  K  G    + + TALVDM+A+CG    A +VF+ + KR
Sbjct: 261 ILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKR 320

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           +V AW A +G +AM G G+  +++F +M+ +  KPD + F+ VL+ACSH GLV+QG+H F
Sbjct: 321 NVVAWNAMLGGLAMHGRGKFVLDIFPKMIEEA-KPDDLTFMAVLSACSHSGLVDQGYHYF 379

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
           RS+   +G +P+I HY CMVD+LGRAG L EA+ LIK MP+ PN+V+ GSLL +C  H  
Sbjct: 380 RSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGK 439

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
           + +     + + ++D   +  HVLLSN+Y   GK      +R  +K +GIRK+PG SSI 
Sbjct: 440 LQLGERILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSIY 499

Query: 717 VNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE---------Q 767
           V G +H+F++GD+SHP    I   L  M  RLR AGYVP+ TN +    +         +
Sbjct: 500 VGGNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGYVPNTTNQVFPGSDGREGSSEEME 559

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+  L  HSEKLA+ FG IST    P+ + KNLR+C DCHS  K+VSK+Y+REI++RD 
Sbjct: 560 EKEQALFLHSEKLAVCFGHISTKPGAPLYIFKNLRICQDCHSAIKIVSKIYNREIVIRDR 619

Query: 828 NRFHFFRQGSCSCSDFW 844
           NRFH F+ GSCSCSD+W
Sbjct: 620 NRFHCFKHGSCSCSDYW 636



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 224/478 (46%), Gaps = 77/478 (16%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF---DRDVFVENCLINFYGECGDIVD 191
           LP +F    +L +C ++S+   G ++H  I+  G      + F+ N L + Y  CG    
Sbjct: 14  LPARFRS--LLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSS 71

Query: 192 GRRVFDEM--SERNVVSWTSLICACARRDL-PKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
            R +F ++  S ++V  WT+L+ +  +    P E  + F EM +EG+  + V M+ V   
Sbjct: 72  ARHLFYQIPRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVL 131

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C ++++L +G +    + ++G+     + NA+++MY+KCG V+  +++F E  +RN+V  
Sbjct: 132 CTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSW 191

Query: 309 NTIM-------------------------------SNYVRLGLAREALAILDEMLLHGPR 337
           +T++                               + YV  G +RE   +LDEM+L    
Sbjct: 192 STLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRL 251

Query: 338 P-DRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMAC 395
             + VT+ S +SA AQ GD+L GR  H Y L+  G E    +   ++DMY KCG  +MA 
Sbjct: 252 GLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAF 311

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           ++F ++  + VV+WN+++ GL  +G  +   ++F +                    M EE
Sbjct: 312 KVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPK--------------------MIEE 351

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALV 514
           A            K D +T + V SAC + G +D     +  +E   G    ++    +V
Sbjct: 352 A------------KPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMV 399

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           D+  R G  + A+ + ++M    +      +G++    N    ++L   +L++ I+ D
Sbjct: 400 DILGRAGHLEEAVMLIKKM---PMCPNEVVLGSLLGSCNAHGKLQLGERILQELIQMD 454



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 186/425 (43%), Gaps = 58/425 (13%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           E    + E+   G++ D      V   CT+    G G Q  G +VKMG    V V N ++
Sbjct: 105 EGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIM 164

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-------- 232
           N Y +CG + + RRVF EM+ERNVVSW++L+    + +  +    +F EM E        
Sbjct: 165 NMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTI 224

Query: 233 ------------EG------------IKPNSVTMVCVISACAKLQNLELGDRVCAY-IDE 267
                       EG            +  N VT+  ++SACA+  ++ +G  V  Y +  
Sbjct: 225 MIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKG 284

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
           +G + + ++  ALVDMY KCG +D A ++F     RN+V  N ++      G  +  L I
Sbjct: 285 MGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDI 344

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT------M 381
             +M +   +PD +T ++ +SA +       G +  GY     LE              M
Sbjct: 345 FPKM-IEEAKPDDLTFMAVLSACSH-----SGLVDQGYHYFRSLESEYGTTPKIEHYACM 398

Query: 382 IDMYMKCGKQEMACRIFDHM---SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD-- 436
           +D+  + G  E A  +   M    N+ V+   SL+     +G ++    +  E+   D  
Sbjct: 399 VDILGRAGHLEEAVMLIKKMPMCPNEVVL--GSLLGSCNAHGKLQLGERILQELIQMDGH 456

Query: 437 HISWNTMLGGL-TQENMFEEAMELFRVMLSERI-KVDRVTMVGVASACGYLGALD----L 490
           +  ++ +L  +   E   ++A  L +++ S+ I KV  V+ + V        A D    L
Sbjct: 457 NTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPL 516

Query: 491 AKWIY 495
            K IY
Sbjct: 517 TKEIY 521



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 16/258 (6%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C  + E+++  C + ++ +    + +  VV        +E +   +  FD   + NE   
Sbjct: 170 CGLVEEVRRVFCEMNERNVVSWSTLLEGVV-------KWEGVENGRVVFDEMPERNEVGW 222

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
           T+     +I GY   G   E   L  E+   F +  +  T   +L+AC +S     G  V
Sbjct: 223 TI-----MIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWV 277

Query: 161 HGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           H   +K MG +  + V   L++ Y +CG I    +VF  + +RNVV+W +++   A    
Sbjct: 278 HVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGR 337

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID-ELGMKANALMVN 278
            K  + +F +M+EE  KP+ +T + V+SAC+    ++ G      ++ E G         
Sbjct: 338 GKFVLDIFPKMIEEA-KPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYA 396

Query: 279 ALVDMYMKCGAVDTAKQL 296
            +VD+  + G ++ A  L
Sbjct: 397 CMVDILGRAGHLEEAVML 414


>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/527 (44%), Positives = 338/527 (64%), Gaps = 7/527 (1%)

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           +++   M  H   PD  T    + +      L  G+  H  +L  GL+    +  ++++M
Sbjct: 46  ISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 105

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y  CG    A RIFD   +K + +WNS++    K G +  AR++F EMP R+ ISW+ ++
Sbjct: 106 YSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLI 165

Query: 445 GGLTQENMFEEAMELFRVMLSER-----IKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
            G      ++EA++LFR M   +     +  ++ TM  V SACG LGAL+  KW+++YI+
Sbjct: 166 NGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYID 225

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAV 558
           K G+  D+ L TAL+DM+A+CG  +RA +VF  +  K+DV A++A I  +AM G  ++  
Sbjct: 226 KYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECF 285

Query: 559 ELFNEML-RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           ++F+EM     I P+S+ FVG+L AC H GL+N+G   F+ MT+  G++P I HYGCMVD
Sbjct: 286 QVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVD 345

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           L GR+GL+ EA   I SMP+EP+ +IWGSLL+  +   ++     A +R+ ELDP  SG 
Sbjct: 346 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGA 405

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +VLLSN+YA  G+W  V R+R +M+ +GI+K+PG S +EV G VHEF  GDES  E   I
Sbjct: 406 YVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERI 465

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
            +ML E+  RLR+AGYV D   VLLD++E++K+  LS+HSEKLA+AF L+ T    P+R+
Sbjct: 466 YAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIAFCLMKTRPGTPVRI 525

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +KNLR+C DCH   K++SK++ REI+VRD NRFH F  GSCSC DFW
Sbjct: 526 IKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSDGSCSCRDFW 572



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 48/346 (13%)

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           IS+Y  +    + PD  TFPF+L +         G + H  I+  G D+D FV   L+N 
Sbjct: 46  ISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 105

Query: 183 YGECGD-------------------------------IVDGRRVFDEMSERNVVSWTSLI 211
           Y  CGD                               I   R++FDEM ERNV+SW+ LI
Sbjct: 106 YSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLI 165

Query: 212 CACARRDLPKEAVYLFFEMV-----EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
                    KEA+ LF EM      E  + PN  TM  V+SAC +L  LE G  V +YID
Sbjct: 166 NGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYID 225

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL-GLAREAL 325
           + G++ + ++  AL+DMY KCG+++ AK++F     +  V   + M   + + GL  E  
Sbjct: 226 KYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECF 285

Query: 326 AILDEMLL-HGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICN 379
            +  EM   +   P+ VT +  + A    G +  G+     M   + +   ++ +     
Sbjct: 286 QVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHY----G 341

Query: 380 TMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVES 424
            M+D+Y + G  + A      M     V+ W SL++G    GD+++
Sbjct: 342 CMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKT 387



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 167/389 (42%), Gaps = 72/389 (18%)

Query: 207 WTSLICACARRDLPKE---AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           W  +I A      P +    + ++F M    + P+  T   ++ +     +L LG R  A
Sbjct: 26  WNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHA 85

Query: 264 YIDELGMKANALMVNALVDMYMKCG-------------------------------AVDT 292
            I   G+  +  +  +L++MY  CG                                ++ 
Sbjct: 86  QILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINH 145

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR-----PDRVTMLSAV 347
           A++LF E  +RN++  + +++ YV  G  +EAL +  EM L  P      P++ TM + +
Sbjct: 146 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVL 205

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM-SNKTV 406
           SA  +LG L  G+  H Y+ + G+E    +   +IDMY KCG  E A R+FD + S K V
Sbjct: 206 SACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDV 265

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
            +++++I  L   G  +   +VFSEM   ++I+ N+                        
Sbjct: 266 KAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNS------------------------ 301

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQR 525
                 VT VG+  AC + G ++  K  +  + E+ GI   +Q    +VD++ R G  + 
Sbjct: 302 ------VTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKE 355

Query: 526 AMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
           A      M  + DV  W + +    M G+
Sbjct: 356 AESFIASMPMEPDVLIWGSLLSGSRMLGD 384



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 14/246 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-----GFGILPD 137
           + +A+K FD   + N  S     ++ LI GY   G   EA+ L+ E+         + P+
Sbjct: 143 INHARKLFDEMPERNVIS-----WSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPN 197

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
           KFT   VL+AC +  A  +G  VH  I K G + D+ +   LI+ Y +CG +   +RVFD
Sbjct: 198 KFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFD 257

Query: 198 EM-SERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNL 255
            + S+++V +++++IC  A   L  E   +F EM     I PNSVT V ++ AC     +
Sbjct: 258 ALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLI 317

Query: 256 ELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK-DRNLVLCNTIMS 313
             G      + +E G+  +      +VD+Y + G +  A+        + ++++  +++S
Sbjct: 318 NKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 377

Query: 314 NYVRLG 319
               LG
Sbjct: 378 GSRMLG 383


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/772 (33%), Positives = 408/772 (52%), Gaps = 90/772 (11%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE------------------ 201
           VH  I+  GF  + F+ N LIN Y +  +I   R++FD++ +                  
Sbjct: 27  VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86

Query: 202 ---------------RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
                          R+ VS+ ++I A +  +    A+ LF +M   G  P+  T   V+
Sbjct: 87  VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKCGA---------VDTA 293
           SA + + + E   R C  +    +K   L++    NAL+  Y+ C +         + +A
Sbjct: 147 SALSLIADEE---RHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203

Query: 294 KQLFGECKDRNL---------------------------------VLCNTIMSNYVRLGL 320
           +++F E     +                                 V  N ++S YVR GL
Sbjct: 204 RKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGL 263

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSA----SAQLGDLLCGRMCHGYVLRNGLEGWD- 375
             EA      M   G + D  T  S +SA    + ++G   CGR  HGY+LR  +E    
Sbjct: 264 YEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHH 323

Query: 376 ---SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
              S+ N +I  Y K  +   A R+FD M  + ++SWN++++G +    +E A  +FSEM
Sbjct: 324 FVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEM 383

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           P R+ ++W  M+ GL Q    EE ++LF  M SE ++       G  +AC  LG+LD  +
Sbjct: 384 PERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQ 443

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I++ + + G    +    AL+ M++RCG  + A  VF  M   D  +W A I A+A  G
Sbjct: 444 QIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHG 503

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           +G +A+ELF +M+++ I PD I F+ +LTAC+H GL+ +G H F +M   +G++P   HY
Sbjct: 504 HGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHY 563

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
             ++DLL RAG+  +A  +IKSMP E    IW +LLA C+ H N+++   AA+R+ EL P
Sbjct: 564 ARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIP 623

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
            + G +++LSN+YA+ G+W  VARVRL M+E+G++K PG S +EV   VH F   D  HP
Sbjct: 624 GQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHP 683

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           E+  + + L+++   ++  GYVPD   VL D++ + K++ LS HSEKLA+ +G++     
Sbjct: 684 EVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLG 743

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             IRV KNLR+C DCH+  K +SKV +REI+VRD  RFH F+ G CSC ++W
Sbjct: 744 ATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 144/626 (23%), Positives = 242/626 (38%), Gaps = 146/626 (23%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM------ 105
           H HIL  G       +++++    +     ++TYA+K FD   K +  + T  +      
Sbjct: 28  HAHILTSGFKPNTFILNRLINIYCKSS---NITYARKLFDKIPKPDIVARTTLLSAYSSS 84

Query: 106 ----------------------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
                                 YN++I  YS    G  A++L+V++  +G LPD FTF  
Sbjct: 85  GNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSS 144

Query: 144 VLNACTKSSAFGEGVQ-VHGAIVKMGFDRDVFVENCLINFYGECGD---------IVDGR 193
           VL+A +  +      Q +H  ++K+G      V N L++ Y  C           +   R
Sbjct: 145 VLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASAR 204

Query: 194 RVFDEMSERNV---------------------------------VSWTSLICACARRDLP 220
           +VFDE  +  +                                 V+W ++I    RR L 
Sbjct: 205 KVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLY 264

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACA----KLQNLELGDRVCAYIDELGMKA---- 272
           +EA   F  M   GI+ +  T   +ISAC     K+     G +V  YI    ++     
Sbjct: 265 EEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHF 324

Query: 273 -----NALMV--------------------------NALVDMYMKCGAVDTAKQLFGECK 301
                NAL+                           NA++  Y+    ++ A  +F E  
Sbjct: 325 VLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMP 384

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           +RN++    ++S   + G   E L + ++M   G  P       A++A + LG L  G+ 
Sbjct: 385 ERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQ 444

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H  V+R G +   S  N +I MY +CG  E A  +F  M     VSWN++IA L ++G 
Sbjct: 445 IHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGH 504

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
                                   G+       +A+ELF  M+ E I  DR+T + + +A
Sbjct: 505 ------------------------GV-------KAIELFEQMMKEDILPDRITFLTILTA 533

Query: 482 CGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVS 539
           C + G +   +  +  +  + GI         L+D+  R G   +A  V + M  +    
Sbjct: 534 CNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAP 593

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEML 565
            W A +    + GN E  ++  + +L
Sbjct: 594 IWEALLAGCRIHGNMELGIQAADRLL 619



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 193/413 (46%), Gaps = 59/413 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC----TKSSAFGEGVQVH 161
           +N++I GY   GL  EA   +  +   GI  D++T+  +++AC     K   F  G QVH
Sbjct: 251 WNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVH 310

Query: 162 GAIVKMGFDRD----VFVENCLINFYGECGDIVDGRRVFD-------------------- 197
           G I++   +      + V N LI FY +   +++ RRVFD                    
Sbjct: 311 GYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNA 370

Query: 198 -----------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
                      EM ERNV++WT +I   A+    +E + LF +M  EG++P        I
Sbjct: 371 QRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAI 430

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           +AC+ L +L+ G ++ + +  LG  +     NAL+ MY +CG V++A+ +F      + V
Sbjct: 431 TACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSV 490

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----M 361
             N +++   + G   +A+ + ++M+     PDR+T L+ ++A    G +  GR     M
Sbjct: 491 SWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTM 550

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNG 420
           C  Y +  G + +      +ID+  + G    A  +   M  +     W +L+AG   +G
Sbjct: 551 CTRYGITPGEDHYAR----LIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHG 606

Query: 421 DVE----SAREVFSEMPGRD--HISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           ++E    +A  +   +PG+D  +I  + M   L Q   ++E   + R+++ ER
Sbjct: 607 NMELGIQAADRLLELIPGQDGTYIILSNMYAALGQ---WDEVARV-RLLMRER 655



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 90/424 (21%), Positives = 165/424 (38%), Gaps = 73/424 (17%)

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           +T L+ VS +      +  R  H ++L +G +    I N +I++Y K      A ++FD 
Sbjct: 11  LTQLNHVSTTQ-----IIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDK 65

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP--GRDHISWNTMLGGLTQENMFEEAME 458
           +    +V+  +L++    +G+V+ A+++F+  P   RD +S+N M+   +  N    A+ 
Sbjct: 66  IPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALN 125

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDL-AKWIYAYIEKNGIHCDMQLATALVDMF 517
           LF  M       D  T   V SA   +   +   + ++  + K G      +  AL+  +
Sbjct: 126 LFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCY 185

Query: 518 ARCGDP---------QRAMQVFRRMEKRDVS----------------------------- 539
             C              A +VF    K  +                              
Sbjct: 186 VCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTY 245

Query: 540 ----AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
               AW A I      G  E+A + F  M   GI+ D   +  +++AC   G  N+   +
Sbjct: 246 PIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGM 302

Query: 596 FRSMTDIHGVSPQIV-----HY-----GCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-W 644
           F     +HG   + V     H+       ++    +   + EA  +   MPV   D+I W
Sbjct: 303 FNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR--DIISW 360

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGV--HVLLSNIYASAGKWTNVARVRLQMK 702
            ++L+     Q ++     A  I    PE++ +   V++S + A  G      ++  QMK
Sbjct: 361 NAVLSGYVNAQRIE----EANSIFSEMPERNVLTWTVMISGL-AQNGFGEEGLKLFNQMK 415

Query: 703 EQGI 706
            +G+
Sbjct: 416 SEGL 419


>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/616 (39%), Positives = 372/616 (60%), Gaps = 13/616 (2%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+  T V ++     L  ++   ++ A +   G+  N  ++  L+  Y+ C  +  A+ +
Sbjct: 53  PSHSTFVQLLKKRPSLTQIK---QIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109

Query: 297 FGECKD-RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP---DRVTMLSAVSASAQ 352
           F +       ++ N ++  Y +   ++E+L +  +ML HG RP   D+ T     +A ++
Sbjct: 110 FDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RPTSADKYTFTFVFTACSR 168

Query: 353 LGDLL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
              L   G   HG V+++G E    + N++++MY    +   A R+FD M  + V++W S
Sbjct: 169 HPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTS 228

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML-SERIKV 470
           ++ G    G++  ARE+F  MPGR+ +SW  M+ G      + EA++ F  ML  + +K 
Sbjct: 229 VVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKP 288

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           +   +V + SAC +LGALD  KWI+ YI+KN I     ++TAL+DM+A+CG    A +VF
Sbjct: 289 NEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVF 348

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
             + KRD+  WT+ I  ++M G G + +  F+EML +G KPD I  +GVL  CSH GLV 
Sbjct: 349 DGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVE 408

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G  +F  M  + G+ P++ HYGC++DLLGRAG L  A + IKSMP+EP+ V W +LL+A
Sbjct: 409 EGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSA 468

Query: 651 CQKHQNVDIAAYAAERITELDP-EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           C+ H +VD+       I EL P    G +VLLSN+YAS G+W +V +VR  M ++G    
Sbjct: 469 CRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGC 528

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR-DAGYVPDLTNVLLDVDEQE 768
           PG S IE++G VHEF + D+ HP ++ I+  L E+  R+  + GYVP    VL D++E++
Sbjct: 529 PGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEED 588

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K+  +S HSEKLA+AFGL+ST +   IR+ KNLR C DCHS  K +S V++REI+VRD +
Sbjct: 589 KEQAVSWHSEKLAVAFGLLSTQEGT-IRITKNLRTCEDCHSAMKTISLVFNREIVVRDRS 647

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH FR G+CSC+D+W
Sbjct: 648 RFHTFRYGNCSCTDYW 663



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 224/465 (48%), Gaps = 47/465 (10%)

Query: 8   SPLVLATPTVTTLTNQHKAKTT---PKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKP 64
           SPLV  +   ++   +    ++   P  S  +  LK   +L ++KQ H  ++  GL    
Sbjct: 28  SPLVYISSNTSSAIWEPSGTSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNT 87

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           S +  ++ +   +G   +L++A+  FD +     T     ++N +I+ YS      E++ 
Sbjct: 88  SLLGPLIHS--YIGC-RNLSFARIVFDQFPSLPPT----IIWNLMIQAYSKTPSSQESLY 140

Query: 125 LYVELAGFG--ILPDKFTFPFVLNACTKSSAF-GEGVQVHGAIVKMGFDRDVFVENCLIN 181
           L+ ++   G     DK+TF FV  AC++     G G  VHG +VK G++ D+FV N L+N
Sbjct: 141 LFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVN 200

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD-----------LP---------- 220
            Y     +VD +RVFDEM +R+V++WTS++   A R            +P          
Sbjct: 201 MYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVM 260

Query: 221 ----------KEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
                      EA+  F +M+  + +KPN   +V ++SACA L  L+ G  +  YID+  
Sbjct: 261 VAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNR 320

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           +  ++ +  AL+DMY KCG +D A+++F     R+L+   +++S     GL  E L    
Sbjct: 321 ILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFS 380

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
           EML  G +PD +T+L  ++  +  G +  G  + H  +   G+         +ID+  + 
Sbjct: 381 EMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRA 440

Query: 389 GKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
           G+ E A      M     VV+W +L++    +GDV+    + + +
Sbjct: 441 GRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHI 485


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 270/769 (35%), Positives = 410/769 (53%), Gaps = 36/769 (4%)

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
           + ++  Q A    + D   +     YN+LIR YS +G    AI LY  +  F + P+K+T
Sbjct: 43  QHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYT 102

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           FPFVL AC+       G  +H      G   D+FV   LI+ Y  C      R VF +M 
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGD 259
            R+VV+W +++   A   +   A+    +M + G ++PN+ T+V ++   A+   L  G 
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222

Query: 260 RVCAYIDELGMKAN---ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
            + AY     ++ N    L+  AL+DMY KC  +  A ++F     RN V  + ++  +V
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282

Query: 317 RLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
                 EA  +  +ML+ G       ++ SA+   A L DL  G   H  + ++G+    
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           +  N+++ MY K                          AGLI       A   F E+  +
Sbjct: 343 TASNSLLSMYAK--------------------------AGLI-----NEATMFFDEIAVK 371

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           D IS+  +L G  Q    EEA  +F+ M +  ++ D  TMV +  AC +L AL   K  +
Sbjct: 372 DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSH 431

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
             +   G+  +  +  +L+DM+A+CG    + QVF +M  RDV +W   I    + G G+
Sbjct: 432 GSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGK 491

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A  LF  M  QG  PD + F+ ++ ACSH GLV +G H F +MT  +G+ P++ HY CM
Sbjct: 492 EATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM 551

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLL R GLL EA   I+SMP++ +  +WG+LL AC+ H+N+D+    +  I +L PE +
Sbjct: 552 VDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGT 611

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G  VLLSNI+++AG++   A VR+  K +G +K PG S IE+NG +H F  GD+SHP   
Sbjct: 612 GNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSR 671

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
           +I   L  +   ++  GY  D + VL D++E+EK+  L +HSEKLA+AFG++S ++   I
Sbjct: 672 DIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTI 731

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            V KNLR+C DCH+  K ++ V +R IIVRD NRFH F+ G CSC +FW
Sbjct: 732 FVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 18/250 (7%)

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W   +   I  G +  AR+VF  +P  D  ++N ++   +    F  A++L+R ML  R+
Sbjct: 37  WQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRV 96

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             ++ T   V  AC  L  L   + I+A+    G+H D+ ++TAL+D++ RC     A  
Sbjct: 97  APNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN 156

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAV-ELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           VF +M  RDV AW A +   A  G    A+  L +     G++P++   V +L   +  G
Sbjct: 157 VFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHG 216

Query: 588 LVNQGWHLFRSMTDIHGV---------SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
            + QG       T IH             Q++    ++D+  +   L  A  +   MPV 
Sbjct: 217 ALFQG-------TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR 269

Query: 639 PNDVIWGSLL 648
            NDV W +L+
Sbjct: 270 -NDVTWSALI 278



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 40/377 (10%)

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           ++ ++  G +  A+Q+F      +    N ++  Y  LG    A+ +   ML     P++
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T    + A + L DL  GR  H +    GL     +   +ID+Y++C +   A  +F  
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  + VV+WN+++AG   +G    A     +M  +DH       GGL             
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDM--QDH-------GGL------------- 198

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY-----IEKNGIHCDMQLATALVD 515
                   + +  T+V +       GAL     I+AY     +E+N     + + TAL+D
Sbjct: 199 --------RPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQN--EEQVLIGTALLD 248

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+A+C     A +VF  M  R+   W+A IG   +     +A  LF +ML +G+   S  
Sbjct: 249 MYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSAT 308

Query: 576 FVG-VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            V   L  C+    ++ G  L  ++    G+   +     ++ +  +AGL+ EA      
Sbjct: 309 SVASALRVCASLADLHMGTQL-HALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDE 367

Query: 635 MPVEPNDVIWGSLLAAC 651
           + V+ + + +G+LL+ C
Sbjct: 368 IAVK-DTISYGALLSGC 383



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 17/231 (7%)

Query: 30  PKDSPSIGSLKNCKTLNELKQPHCH---ILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  +  +  +  C  L  L+   C    ++ +GL  + S  + ++   A+ G  +    +
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKID---LS 462

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ FD     +  S     +N++I GY   GLG EA +L++ +   G  PD  TF  ++ 
Sbjct: 463 RQVFDKMPARDVVS-----WNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517

Query: 147 ACTKSSAFGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNV 204
           AC+ S    EG      +  K G    +    C+++     G + +  +    M  + +V
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 205 VSWTSLICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             W +L+ AC      DL K+   +  ++  EG   N V +  + SA  + 
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLSNIFSAAGRF 627


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/762 (33%), Positives = 409/762 (53%), Gaps = 36/762 (4%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A++ FD   + N  S     + +L++GY+  G   EA  L+  L   G   + F   
Sbjct: 100 LAAARRLFDGMPERNMVS-----FVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLT 154

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +L       A G    +H    K+G DR+ FV + LI+ Y  CG +   R VFD +  +
Sbjct: 155 TILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWK 214

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + V+WT+++   +  D+P++A+  F +M   G KPN   +  V+ A   L +  LG  + 
Sbjct: 215 DAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIH 274

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
               +        +  AL+DMY KCG ++ A+ +F      +++L + ++S Y +     
Sbjct: 275 GCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNE 334

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +A  +   M+     P+  ++   + A A +  L  G+  H  V++ G E    + N ++
Sbjct: 335 QAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALM 394

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           D+Y KC   E                 NSL              E+F  +   + +SWNT
Sbjct: 395 DVYAKCRNME-----------------NSL--------------EIFRSLRDANEVSWNT 423

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           ++ G  Q    E+A+ +F+ M +  +   +VT   V  AC    ++     I++ IEK+ 
Sbjct: 424 IIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKST 483

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
            + D  +  +L+D +A+CG  + A++VF  + + DV +W A I   A+ G    A+ELFN
Sbjct: 484 FNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFN 543

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
            M +   KP+ + FV +L+ C   GLVNQG  LF SMT  H + P + HY C+V LLGRA
Sbjct: 544 RMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRA 603

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G L +AL  I  +P  P+ ++W +LL++C  H+NV +  ++AE++ E++P+    +VLLS
Sbjct: 604 GRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLS 663

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           N+YA+AG    VA +R  M+  G++K  G S +E+ G+VH F+ G   HP+M  I++ML 
Sbjct: 664 NMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLE 723

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
            +N +    GYVPD+  VL DVDE+EK  +L  HSE+LA+A+GL  T    PIR++KNLR
Sbjct: 724 WLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLR 783

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            C DCH+  K++SK+  REI+VRD NRFH F +G CSC D+W
Sbjct: 784 SCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/567 (23%), Positives = 250/567 (44%), Gaps = 39/567 (6%)

Query: 128 ELAGFGILP--DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG--FDRDVFVENCLINFY 183
           ELA    LP  D +    +L  C        G  VH  +V+ G     D F  N L+N Y
Sbjct: 36  ELASLA-LPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLY 94

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            + G +   RR+FD M ERN+VS+ +L+   A R   +EA  LF  +  EG + N   + 
Sbjct: 95  AKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLT 154

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
            ++     +    L   + A   +LG   NA + ++L+D Y  CGAV  A+ +F     +
Sbjct: 155 TILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWK 214

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           + V    ++S Y    +  +AL    +M + G +P+   + S + A+  L   + G+  H
Sbjct: 215 DAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIH 274

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
           G  ++   +    +   ++DMY KCG  E A  +F+ + +  V+ W+ LI+         
Sbjct: 275 GCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLIS--------- 325

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
                                    Q    E+A E+F  M+   +  +  ++ GV  AC 
Sbjct: 326 ----------------------RYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACA 363

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
            +  LDL + I+  + K G   ++ +  AL+D++A+C + + ++++FR +   +  +W  
Sbjct: 364 NVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNT 423

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I      G  E A+ +F EM    +    + F  VL AC++   +     +  S+ +  
Sbjct: 424 IIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQI-HSLIEKS 482

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
             +   +    ++D   + G + +AL + +S+ ++ + V W ++++    H     A   
Sbjct: 483 TFNNDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATDALEL 541

Query: 664 AERITELDPEKSGV-HVLLSNIYASAG 689
             R+ + D + + V  V L ++  S G
Sbjct: 542 FNRMNKSDTKPNDVTFVALLSVCGSTG 568



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 198/396 (50%), Gaps = 16/396 (4%)

Query: 82  SLTYAQKAFDYYI-KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
           ++++A+  FD  I KD  T      + +++  YS   +  +A++ + ++   G  P+ F 
Sbjct: 200 AVSHARCVFDGIIWKDAVT------WTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFV 253

Query: 141 FPFVLNA--CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
              VL A  C  S+  G+G+  HG  VK   D +  V   L++ Y +CG I D R VF+ 
Sbjct: 254 LTSVLKAAVCLSSAVLGKGI--HGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEI 311

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           +   +V+ W+ LI   A+    ++A  +F  M+   + PN  ++  V+ ACA +  L+LG
Sbjct: 312 IPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLG 371

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            ++   + +LG ++   + NAL+D+Y KC  ++ + ++F   +D N V  NTI+  Y + 
Sbjct: 372 QQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQS 431

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G A +AL++  EM        +VT  S + A A    +      H  + ++       +C
Sbjct: 432 GFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVC 491

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD-- 436
           N++ID Y KCG    A ++F+ +    VVSWN++I+G   +G    A E+F+ M   D  
Sbjct: 492 NSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTK 551

Query: 437 --HISWNTMLGGLTQENMFEEAMELFRVM-LSERIK 469
              +++  +L       +  + + LF  M +  RIK
Sbjct: 552 PNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIK 587


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 283/846 (33%), Positives = 443/846 (52%), Gaps = 98/846 (11%)

Query: 64  PSYISKVVCTCAQMGTFESLTY-AQKAFDY--YIKDNETSATLFMYNSLIRGYSCIGLGV 120
           P+  S+   +   +GT    +Y A  A DY   + +  T +    +N LIR +   G   
Sbjct: 40  PALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLD 99

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
            AI++   +   G   D FT P VL AC +  ++  G   HG I   GF+ +VF+ N L+
Sbjct: 100 SAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALV 159

Query: 181 NFYGECGDIVDGRRVFDEMSER---NVVSWTSLICACARRDLPKEAVYLFFEM---VEEG 234
             Y  CG + +   +FDE+++R   +V+SW S++ A  +      A+ LF +M   V E 
Sbjct: 160 AMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE- 218

Query: 235 IKPNS-----VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
            KP +     +++V ++ AC  L+ +     V       G   +  + NAL+D Y KCG 
Sbjct: 219 -KPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGL 277

Query: 290 VDTAKQLFG--ECKD---------------------------------RNLVLCNTIMSN 314
           ++ A ++F   E KD                                  ++V    +++ 
Sbjct: 278 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAG 337

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y + G + EAL +  +M+  G  P+ VT++S +SA A LG    G   H Y L+N L   
Sbjct: 338 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTL 397

Query: 375 DS----------ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           D+          + N +IDMY KC       R F                        ++
Sbjct: 398 DNDFGGEDEDLMVYNALIDMYSKC-------RSF------------------------KA 426

Query: 425 AREVFSEMP--GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV--DRVTMVGVAS 480
           AR +F ++P   R+ ++W  M+GG  Q     +A++LF  M+SE   V  +  T+  +  
Sbjct: 427 ARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILM 486

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQ--LATALVDMFARCGDPQRAMQVFRRMEKRDV 538
           AC +L A+ + K I+AY+ ++  +      +A  L++M+++CGD   A  VF  M ++  
Sbjct: 487 ACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSA 546

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +WT+ +    M G G +A+++F++M + G  PD I F+ VL ACSH G+V+QG   F S
Sbjct: 547 ISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDS 606

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M+  +G++P+  HY   +DLL R G L +A   +K MP+EP  V+W +LL+AC+ H NV+
Sbjct: 607 MSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVE 666

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +A +A  ++ E++ E  G + L+SNIYA+AG+W +VAR+R  MK+ GI+K PG S ++  
Sbjct: 667 LAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQ 726

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
                F  GD SHP    I ++L  +  R++  GYVP+    L DVDE+EK  LL  HSE
Sbjct: 727 KGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSE 786

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLA+A+GL++T    PIR+ KNLR+C DCHS    +SK+ D EI+VRD +RFH F+ GSC
Sbjct: 787 KLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSC 846

Query: 839 SCSDFW 844
           SC  +W
Sbjct: 847 SCGGYW 852


>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
 gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
          Length = 632

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/606 (40%), Positives = 361/606 (59%), Gaps = 16/606 (2%)

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT---AKQLFGECKDRNLVL 307
           K Q++    +  + I  LG+ ++  ++  L++   +    D    A +LF      +  L
Sbjct: 31  KCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFL 90

Query: 308 CNTIMSNYVRLGL--AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
            NTI+  ++   L      L +   ML +   P+  T  S + A  ++     G   H +
Sbjct: 91  YNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKIQH---GMQIHAH 147

Query: 366 VLRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           + + G  G  S+C N++I MY+     E A R+F  + +   VSW SLI+G  K G ++ 
Sbjct: 148 LFKFGF-GAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDE 206

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-DRVTMVGVASACG 483
           A  +F  MP ++  SWN M+    Q N F EA  LF  M +E   V D+     + SAC 
Sbjct: 207 AFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACT 266

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK--RDVSAW 541
            LGALD  KWI+ YI++NGI  D +L TA+VDM+ +CG  ++A+QVF  +    R +S+W
Sbjct: 267 GLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSW 326

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
              IG +AM GNGE A++LF EM RQ + PD I F+ +LTAC+H GLV +G + F  M  
Sbjct: 327 NCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIR 386

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
           ++G+ P++ H+GCMVDLLGRAG++ EA  LI  MPV P+  + G+LL AC+KH+N+++  
Sbjct: 387 VYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGE 446

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
               R+ EL+P  SG +VLL+N+YA+AGKW + A+VR  M ++G++K PG S IE+ G V
Sbjct: 447 EIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTV 506

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL--LDVDEQEK-KYLLSHHSE 778
           HEF +G+ +HP+   + + + EM   L+  GYV D   VL   D DE+E  +  L +HSE
Sbjct: 507 HEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDFDEEEDGENPLYYHSE 566

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLA+AFGL  T     +R++KNLR+C DCH   KL+S V+DREIIVRD  RFH F+ G C
Sbjct: 567 KLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRFHRFKMGQC 626

Query: 839 SCSDFW 844
           SC D+W
Sbjct: 627 SCQDYW 632



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 192/428 (44%), Gaps = 46/428 (10%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
            + C+++++L+Q H  I++ GL      I  ++  CA+  T ++LTYA K FD   + + 
Sbjct: 29  FEKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDA 88

Query: 99  TSATLFMYNSLIRGY--SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
                F+YN++I+G+  S +      + LY  +    +LP+ FTFP +L AC K      
Sbjct: 89  -----FLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRK---IQH 140

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G+Q+H  + K GF       N LI+ Y     + + RRVF  +   + VSWTSLI   ++
Sbjct: 141 GMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSK 200

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVC-------------------------------- 244
             L  EA  +F  M ++     +  M                                  
Sbjct: 201 WGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATT 260

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD-- 302
           ++SAC  L  L+ G  +  YI   G++ ++ +  A+VDMY KCG ++ A Q+F       
Sbjct: 261 MLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPC 320

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R +   N ++      G    A+ +  EM      PD +T L+ ++A A  G +  GR  
Sbjct: 321 RWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNY 380

Query: 363 HGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNG 420
             Y++R  G+E        M+D+  + G    A ++ D M  +  V    +L+    K+ 
Sbjct: 381 FSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHR 440

Query: 421 DVESAREV 428
           ++E   E+
Sbjct: 441 NIELGEEI 448


>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/640 (39%), Positives = 376/640 (58%), Gaps = 37/640 (5%)

Query: 235 IKPNSVTM-----VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
            +PN+ +      V  I AC  ++ L+   +V A++ + G   +    NA+    ++  A
Sbjct: 6   FQPNTASYYPRLDVPQIKACKSMRELK---QVHAFLVKTGQTHD----NAIATEILRLSA 58

Query: 290 ------VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR-EALAILDEMLLHGP-RPDRV 341
                 +  A  +F +  +RN    NT++           +AL +  +ML      P++ 
Sbjct: 59  TSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQF 118

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF--- 398
           T  S + A A +  L  G+  HG +L+ GL   + +   ++ MY+ CG  E A  +F   
Sbjct: 119 TFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRN 178

Query: 399 ----DHMSNKT---------VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
               D + N           VV  N ++ G  + G++++ARE+F  M  R  +SWN M+ 
Sbjct: 179 VEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMIS 238

Query: 446 GLTQENMFEEAMELF-RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
           G  Q   ++EA+E+F R+M    +  +RVT+V V  A   LG L+L KW++ Y EKN I 
Sbjct: 239 GYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIR 298

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            D  L +ALVDM+A+CG  ++A+QVF R+ + +V  W A IG +AM G         + M
Sbjct: 299 IDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRM 358

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
            + GI P  + ++ +L+ACSH GLV++G   F  M +  G+ P+I HYGCMVDLLGRAG 
Sbjct: 359 EKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGY 418

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA +LI +MP++P+DVIW +LL A + H+N+ I   AAE + ++ P  SG +V LSN+
Sbjct: 419 LEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNM 478

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YAS+G W  VA VRL MK+  IRK PG S IE++G +HEF   D+SH    +I SML E+
Sbjct: 479 YASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEI 538

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
           + +L   G++PD T VLL +DE+ K+ +L +HSEK+A+AFGLIST    P+ +VKNLR+C
Sbjct: 539 SNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRIC 598

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCHS  KL+SK+Y+R+I++RD  RFH F  GSCSC D+W
Sbjct: 599 EDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 216/471 (45%), Gaps = 73/471 (15%)

Query: 26  AKTTPK-DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
           A   P+ D P I   K CK++ ELKQ H  ++K G  H  +  ++++   A    F  + 
Sbjct: 11  ASYYPRLDVPQI---KACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSAT-SDFRDIG 66

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYS-CIGLGVEAISLYVE-LAGFGILPDKFTFP 142
           YA   FD   + N      F +N++IR  +      ++A+ ++ + L+   + P++FTFP
Sbjct: 67  YALSVFDQLPERN-----CFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFP 121

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI------------- 189
            VL AC   +   EG QVHG ++K G   D FV   L+  Y  CG +             
Sbjct: 122 SVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEG 181

Query: 190 ------------------------VDG----------RRVFDEMSERNVVSWTSLICACA 215
                                   VDG          R +FD M++R+VVSW  +I   A
Sbjct: 182 VDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYA 241

Query: 216 RRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           +    KEA+ +F  M++ G + PN VT+V V+ A ++L  LELG  V  Y ++  ++ + 
Sbjct: 242 QNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDD 301

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           ++ +ALVDMY KCG+++ A Q+F      N++  N ++      G A +    L  M   
Sbjct: 302 VLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKC 361

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           G  P  VT ++ +SA +  G +  GR     M +   L+  +E +      M+D+  + G
Sbjct: 362 GISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHY----GCMVDLLGRAG 417

Query: 390 KQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDVE---SAREVFSEMPGRD 436
             E A  +  +M  K   V W +L+     + +++    A EV  +M   D
Sbjct: 418 YLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHD 468


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/675 (38%), Positives = 382/675 (56%), Gaps = 48/675 (7%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R+    N LI+ + + G + + RRVFD M +RNVVSWTS++    R     EA  LF+ M
Sbjct: 84  RNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHM 143

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
             +           V+S    L  L                             ++ G V
Sbjct: 144 PHKN----------VVSWTVMLGGL-----------------------------LQEGRV 164

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           D A++LF    ++++V    ++  Y   G   EA A+ DEM    P+ + VT  + VS  
Sbjct: 165 DDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEM----PKRNVVTWTAMVSGY 220

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           A+ G +   R     +       W      M+  Y   G+   A  +FD M  K VV  N
Sbjct: 221 ARNGKVDVARKLFEVMPERNEVSW----TAMLLGYTHSGRMREASSLFDAMPVKPVVVCN 276

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
            +I G   NG+V+ AR VF  M  RD+ +W+ M+    ++    EA+ LFR M  E + +
Sbjct: 277 EMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLAL 336

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           +  +++ V S C  L +LD  K ++A + ++    D+ +A+ L+ M+ +CG+  RA QVF
Sbjct: 337 NFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVF 396

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
            R   +DV  W + I   +  G GE+A+ +F++M   G+ PD + F+GVL+ACS+ G V 
Sbjct: 397 NRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVK 456

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G  LF +M   + V P I HY C+VDLLGRA  + EA+ L++ MP+EP+ ++WG+LL A
Sbjct: 457 EGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H  +D+A  A E++ +L+P+ +G +VLLSN+YA  G+W +V  +R ++K + + KLP
Sbjct: 517 CRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLP 576

Query: 711 GSSSIEVNGKVHEFTSGD-ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           G S IEV  KVH FT GD + HPE   I  ML ++   LR+AGY PD + VL DVDE+EK
Sbjct: 577 GCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEK 636

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
            + L +HSEKLA+A+GL+   + MPIRV+KNLR+C DCHS  KL++KV  REII+RD NR
Sbjct: 637 THSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANR 696

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+ G CSC D+W
Sbjct: 697 FHHFKDGHCSCKDYW 711



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 204/467 (43%), Gaps = 54/467 (11%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L+ A++ FD     N  S     + S++RGY   G   EA  L+  +    ++    ++ 
Sbjct: 102 LSEARRVFDTMPDRNVVS-----WTSMVRGYVRNGDVAEAERLFWHMPHKNVV----SWT 152

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +L    +     +  +    +  M  ++DV     +I  Y E G + + R +FDEM +R
Sbjct: 153 VMLGGLLQEGRVDDARK----LFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKR 208

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           NVV+WT+++   AR      A  L FE++ E  + +   M+   +   +++         
Sbjct: 209 NVVTWTAMVSGYARNGKVDVARKL-FEVMPERNEVSWTAMLLGYTHSGRMRE------AS 261

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           +  D + +K   ++ N ++  +   G VD A+++F   K+R+    + ++  Y R G   
Sbjct: 262 SLFDAMPVKP-VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYEL 320

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL +   M   G   +  +++S +S    L  L  G+  H  ++R+  +    + + +I
Sbjct: 321 EALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLI 380

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY+KCG    A ++F+    K VV WNS+I G                           
Sbjct: 381 TMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITG--------------------------- 413

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KN 501
                +Q  + EEA+ +F  M S  +  D VT +GV SAC Y G +     ++  ++ K 
Sbjct: 414 ----YSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKY 469

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
            +   ++    LVD+  R      AM++  +M  + D   W A +GA
Sbjct: 470 QVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 29/273 (10%)

Query: 382 IDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           I  Y + G+ + A ++FD   + ++TV SWN+++A   +      A  +F +MP R+ +S
Sbjct: 29  IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVS 88

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA---KWIYA 496
           WN ++ G  +  M  EA  +F  M       DR  +   +   GY+   D+A   +  + 
Sbjct: 89  WNGLISGHIKNGMLSEARRVFDTM------PDRNVVSWTSMVRGYVRNGDVAEAERLFWH 142

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
              KN +   + L   L +     G    A ++F  M ++DV A T  IG    EG  ++
Sbjct: 143 MPHKNVVSWTVMLGGLLQE-----GRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDE 197

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A  LF+EM ++ +    + +  +++  +  G V+    LF  M + + VS     +  M+
Sbjct: 198 ARALFDEMPKRNV----VTWTAMVSGYARNGKVDVARKLFEVMPERNEVS-----WTAML 248

Query: 617 DLLGRAGLLGEALDLIKSMPVEP----NDVIWG 645
                +G + EA  L  +MPV+P    N++I G
Sbjct: 249 LGYTHSGRMREASSLFDAMPVKPVVVCNEMIMG 281



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 92/175 (52%), Gaps = 14/175 (8%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY-IKDNETSAT 102
           +L+  KQ H  +++          S ++    + G   +L  A++ F+ + +KD      
Sbjct: 353 SLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCG---NLVRAKQVFNRFPLKD------ 403

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           + M+NS+I GYS  GLG EA++++ ++   G+ PD  TF  VL+AC+ S    EG+++  
Sbjct: 404 VVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELF- 462

Query: 163 AIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
             +K  +  +  +E+  CL++  G    + +  ++ ++M  E + + W +L+ AC
Sbjct: 463 ETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGAC 517


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/740 (34%), Positives = 410/740 (55%), Gaps = 33/740 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS+I  +   G  +EA+SL+  +   G+  + +TF   L AC   +    G  +H  I+
Sbjct: 219 WNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVIL 278

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K     DV+V N LI  Y  CG + D  RVF  M  ++ VSW +L+    + D+  +A+ 
Sbjct: 279 KSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAIN 338

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F +M + G KP+ V+++ +I+A  +  NL  G  V AY  + G+ +N  + N+L+DMY 
Sbjct: 339 HFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYG 398

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KC  V      F    +++L+   TI++ Y +     +AL +L ++ L     D + + S
Sbjct: 399 KCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGS 458

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A + L      +  HGYVL+ GL     I N ++++Y +    + A  +F+ +++K 
Sbjct: 459 ILLACSGLKSEKLIKEIHGYVLKGGLADI-LIQNAIVNVYGELALVDYARHVFESINSKD 517

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +VSW S+I   + NG                               +  EA+ELF  ++ 
Sbjct: 518 IVSWTSMITCCVHNG-------------------------------LAIEALELFNSLIE 546

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             I+ D +T+V V  A   L +L   K I+ ++ + G   +  +A +LVDM+ARCG  + 
Sbjct: 547 TNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMEN 606

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A  +F  +++RD+  WT+ I A  M G G+ A++LF++M  + + PD I F+ +L ACSH
Sbjct: 607 ARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSH 666

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV +G   F  M + + + P   HY C+VDLL R+  L EA   +++MP+EP+  +W 
Sbjct: 667 SGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWC 726

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC+ H N D+   AA+++ +L+ E SG +VL+SN +A+ G+W +V  VR  MK   
Sbjct: 727 ALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNK 786

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD-AGYVPDLTNVLLDV 764
           ++K PG S IEV  K+H F + D+SHP+ NNI   L +    L++  GY      V  DV
Sbjct: 787 LKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDV 846

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
            E+EK  +L  HSE+LA+ +GL+ TSK   +R+ KNLR+C DCH+F K+ S++  R ++V
Sbjct: 847 CEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVV 906

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD +RFH F +G CSC DFW
Sbjct: 907 RDASRFHHFERGLCSCGDFW 926



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 188/648 (29%), Positives = 307/648 (47%), Gaps = 82/648 (12%)

Query: 43  KTLNELKQPHCHILK-QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           K L + +Q H H LK Q         +K V    + G+F     A K FD       +  
Sbjct: 60  KALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYD---AVKVFD-----KMSER 111

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE---GV 158
           T+F +N++I      G  VEAI LY E+   G+  D FTFP VL AC    AF E   G 
Sbjct: 112 TIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC---GAFKERRLGC 168

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE--MSERNVVSWTSLICACAR 216
           ++HG  VK G+   VFV N LI  Y +CGD+   R +FD   M + + VSW S+I A   
Sbjct: 169 EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVG 228

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
                EA+ LF  M E G++ N+ T V  + AC     +++G  + A I +     +  +
Sbjct: 229 EGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYV 288

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            NAL+ MY  CG ++ A+++F     ++ V  NT++S  V+  +  +A+    +M   G 
Sbjct: 289 SNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQ 348

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           +PD+V++L+ ++AS +  +LL G   H Y +++G++    I N++IDMY KC   +    
Sbjct: 349 KPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGS 408

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
            F++M  K ++SW ++IAG  +N                 H+                +A
Sbjct: 409 AFEYMPEKDLISWTTIIAGYAQN---------------ECHL----------------DA 437

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + L R +  E++ VD + +  +  AC  L +  L K I+ Y+ K G+  D+ +  A+V++
Sbjct: 438 LNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNV 496

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +        A  VF  +  +D+ +WT+ I      G   +A+ELFN ++   I+PD I  
Sbjct: 497 YGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITL 556

Query: 577 VGVLTACS-----------HGGLVNQGWHL----FRSMTDIHG---------------VS 606
           V VL A +           HG L+ +G+ L      S+ D++                  
Sbjct: 557 VSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQ 616

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAAC 651
             ++ +  M++  G  G   +A+DL   M  E   P+ + + +LL AC
Sbjct: 617 RDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYAC 664



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 265/573 (46%), Gaps = 62/573 (10%)

Query: 135 LPDKFTFPF------VLNACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECG 187
           LP    FP        L  C    A  +G Q+H   +K   +   VF++   ++ YG+CG
Sbjct: 37  LPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCG 96

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
              D  +VFD+MSER + +W ++I AC       EA+ L+ EM   G+  ++ T  CV+ 
Sbjct: 97  SFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLK 156

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF--GECKDRNL 305
           AC   +   LG  +     + G      + NAL+ MY KCG +  A+ LF  G  +  + 
Sbjct: 157 ACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDP 216

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  N+I+S +V  G + EAL++   M   G   +  T +SA+ A      +  GR  H  
Sbjct: 217 VSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAV 276

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +L++       + N +I MY  CG+ E A R+F  M  K  VSWN+L++G+++N      
Sbjct: 277 ILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQN------ 330

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                    +M+ +A+  F+ M     K D+V+++ + +A G  
Sbjct: 331 -------------------------DMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRS 365

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
             L     ++AY  K+GI  +M +  +L+DM+ +C   +     F  M ++D+ +WT  I
Sbjct: 366 ANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTII 425

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
              A       A+ L  ++  + +  D ++   +L ACS  GL ++     + + +IHG 
Sbjct: 426 AGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS--GLKSE-----KLIKEIHGY 478

Query: 606 S-----PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDI 659
                   I+    +V++ G   L+  A  + +S  +   D++ W S++  C  H  + I
Sbjct: 479 VLKGGLADILIQNAIVNVYGELALVDYARHVFES--INSKDIVSWTSMITCCV-HNGLAI 535

Query: 660 AA---YAAERITELDPEKSGVHVLLSNIYASAG 689
            A   + +   T ++P+   +  L+S +YA+A 
Sbjct: 536 EALELFNSLIETNIEPD---LITLVSVLYAAAA 565


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 270/769 (35%), Positives = 410/769 (53%), Gaps = 36/769 (4%)

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
           + ++  Q A    + D   +     YN+LIR YS +G    AI LY  +  F + P+K+T
Sbjct: 43  QHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYT 102

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           FPFVL AC+       G  +H      G   D+FV   LI+ Y  C      R VF +M 
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGD 259
            R+VV+W +++   A   +   A+    +M + G ++PN+ T+V ++   A+   L  G 
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222

Query: 260 RVCAYIDELGMKAN---ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
            + AY     ++ N    L+  AL+DMY KC  +  A ++F     RN V  + ++  +V
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282

Query: 317 RLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
                 EA  +  +ML+ G       ++ SA+   A L DL  G   H  + ++G+    
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           +  N+++ MY K                          AGLI       A   F E+  +
Sbjct: 343 TASNSLLSMYAK--------------------------AGLI-----NEATMFFDEIAVK 371

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           D IS+  +L G  Q    EEA  +F+ M +  ++ D  TMV +  AC +L AL   K  +
Sbjct: 372 DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSH 431

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
             +   G+  +  +  +L+DM+A+CG    + QVF +M  RDV +W   I    + G G+
Sbjct: 432 GSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGK 491

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A  LF  M  QG  PD + F+ ++ ACSH GLV +G H F +MT  +G+ P++ HY CM
Sbjct: 492 EATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM 551

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLL R GLL EA   I+SMP++ +  +WG+LL AC+ H+N+D+    +  I +L PE +
Sbjct: 552 VDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGT 611

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G  VLLSNI+++AG++   A VR+  K +G +K PG S IE+NG +H F  GD+SHP   
Sbjct: 612 GNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSR 671

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
           +I   L  +   ++  GY  D + VL D++E+EK+  L +HSEKLA+AFG++S ++   I
Sbjct: 672 DIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTI 731

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            V KNLR+C DCH+  K ++ V +R IIVRD NRFH F+ G CSC +FW
Sbjct: 732 FVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 18/250 (7%)

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W   +   I  G +  AR+VF  +P  D  ++N ++   +    F  A++L+R ML  R+
Sbjct: 37  WQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRV 96

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             ++ T   V  AC  L  L   + I+A+    G+H D+ ++TAL+D++ RC     A  
Sbjct: 97  APNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN 156

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAV-ELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           VF +M  RDV AW A +   A  G    A+  L +     G++P++   V +L   +  G
Sbjct: 157 VFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHG 216

Query: 588 LVNQGWHLFRSMTDIHGV---------SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
            + QG       T IH             Q++    ++D+  +   L  A  +   MPV 
Sbjct: 217 ALFQG-------TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR 269

Query: 639 PNDVIWGSLL 648
            NDV W +L+
Sbjct: 270 -NDVTWSALI 278



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 40/377 (10%)

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           ++ ++  G +  A+Q+F      +    N ++  Y  LG    A+ +   ML     P++
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T    + A + L DL  GR  H +    GL     +   +ID+Y++C +   A  +F  
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  + VV+WN+++AG   +G    A     +M  +DH       GGL             
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDM--QDH-------GGL------------- 198

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY-----IEKNGIHCDMQLATALVD 515
                   + +  T+V +       GAL     I+AY     +E+N     + + TAL+D
Sbjct: 199 --------RPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQN--EEQVLIGTALLD 248

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+A+C     A +VF  M  R+   W+A IG   +     +A  LF +ML +G+   S  
Sbjct: 249 MYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSAT 308

Query: 576 FVG-VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            V   L  C+    ++ G  L  ++    G+   +     ++ +  +AGL+ EA      
Sbjct: 309 SVASALRVCASLADLHMGTQL-HALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDE 367

Query: 635 MPVEPNDVIWGSLLAAC 651
           + V+ + + +G+LL+ C
Sbjct: 368 IAVK-DTISYGALLSGC 383



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 17/231 (7%)

Query: 30  PKDSPSIGSLKNCKTLNELKQPHCH---ILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  +  +  +  C  L  L+   C    ++ +GL  + S  + ++   A+ G  +    +
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKID---LS 462

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ FD     +  S     +N++I GY   GLG EA +L++ +   G  PD  TF  ++ 
Sbjct: 463 RQVFDKMPARDVVS-----WNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517

Query: 147 ACTKSSAFGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNV 204
           AC+ S    EG      +  K G    +    C+++     G + +  +    M  + +V
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 205 VSWTSLICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             W +L+ AC      DL K+   +  ++  EG   N V +  + SA  + 
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLSNIFSAAGRF 627


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/655 (36%), Positives = 383/655 (58%), Gaps = 35/655 (5%)

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           +VFD+M ERN+V+WT +I   A+    ++A+ LF +M   G  P+  T   V+SAC +L 
Sbjct: 6   KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKC---GAVDTAKQLFGECKDRNLVLCNT 310
            L LG ++ + +  LG+  +  +  +LVDMY KC   G+VD ++++F +  + N++    
Sbjct: 66  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125

Query: 311 IMSNYVRLG-LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           I++ Y + G   +EA+ +  +M+    RP+  +  S + A   L D   G   + Y ++ 
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G+   + + N++I MY + G+                               +E AR+ F
Sbjct: 186 GIASVNCVGNSLISMYARSGR-------------------------------MEDARKAF 214

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
             +  ++ +S+N ++ G  +    EEA  LF  +    I +   T   + S    +GA+ 
Sbjct: 215 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 274

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
             + I+  + K G   +  +  AL+ M++RCG+ + A QVF  ME R+V +WT+ I   A
Sbjct: 275 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 334

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
             G   +A+E+F++ML  G KP+ I +V VL+ACSH G++++G   F SM   HG+ P++
Sbjct: 335 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 394

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HY CMVDLLGR+GLL EA++ I SMP+  + ++W +LL AC+ H N ++  +AAE I E
Sbjct: 395 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 454

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
            +P+    ++LLSN++ASAG+W +V ++R  MKE+ + K  G S IEV  +VH F  G+ 
Sbjct: 455 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 514

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SHP+   I   L ++  ++++ GY+PD   VL D++E++K+  L  HSEK+A+AFGLIST
Sbjct: 515 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 574

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S++ PIR+ KNLR+C DCH+  K +S    REI+VRD+NRFH  + G CSC+D+W
Sbjct: 575 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 246/493 (49%), Gaps = 44/493 (8%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A K FD   + N  + TL     +I  ++ +G   +AI L++++   G +PD+FT+  VL
Sbjct: 4   AYKVFDKMPERNLVTWTL-----MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 58

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC---GDIVDGRRVFDEMSER 202
           +ACT+      G Q+H  ++++G   DV V   L++ Y +C   G + D R+VF++M E 
Sbjct: 59  SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 118

Query: 203 NVVSWTSLICACARR-DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           NV+SWT++I A A+  +  KEA+ LF +M+   I+PN  +   V+ AC  L +   G++V
Sbjct: 119 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 178

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            +Y  +LG+ +   + N+L+ MY + G ++ A++ F    ++NLV  N I+  Y +   +
Sbjct: 179 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 238

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EA  + +E+   G      T  S +S +A +G +  G   HG +L+ G +    ICN +
Sbjct: 239 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 298

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           I MY +CG  E A ++F+ M ++ V+SW S+I G  K+G                     
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG--------------------- 337

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEK 500
                         A+E+F  ML    K + +T V V SAC ++G + +  K   +  ++
Sbjct: 338 ----------FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 387

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVE 559
           +GI   M+    +VD+  R G    AM+    M    D   W   +GA  + GN E    
Sbjct: 388 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 447

Query: 560 LFNEMLRQGIKPD 572
               +L Q  +PD
Sbjct: 448 AAEMILEQ--EPD 458



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 165/320 (51%), Gaps = 9/320 (2%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L  C  L  L   KQ H  +++ GL         +V   A+     S+  ++K F+   +
Sbjct: 58  LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 117

Query: 96  DNETSATLFMYNSLIRGYSCIG-LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
            N  S     + ++I  Y+  G    EAI L+ ++    I P+ F+F  VL AC   S  
Sbjct: 118 HNVMS-----WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 172

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G QV+   VK+G      V N LI+ Y   G + D R+ FD + E+N+VS+ +++   
Sbjct: 173 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 232

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A+    +EA  LF E+ + GI  ++ T   ++S  A +  +  G+++   + + G K+N 
Sbjct: 233 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 292

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + NAL+ MY +CG ++ A Q+F E +DRN++   ++++ + + G A  AL +  +ML  
Sbjct: 293 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 352

Query: 335 GPRPDRVTMLSAVSASAQLG 354
           G +P+ +T ++ +SA + +G
Sbjct: 353 GTKPNEITYVAVLSACSHVG 372



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 169/365 (46%), Gaps = 35/365 (9%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A ++F +  +RNLV    +++ + +LG AR+A+ +  +M L G  PDR T  S +SA  +
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC---GKQEMACRIFDHMSNKTVVSW 409
           LG L  G+  H  V+R GL     +  +++DMY KC   G  + + ++F+ M    V+SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            ++I    ++G+ +                              +EA+ELF  M+S  I+
Sbjct: 124 TAIITAYAQSGECD------------------------------KEAIELFCKMISGHIR 153

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +  +   V  ACG L      + +Y+Y  K GI     +  +L+ M+AR G  + A + 
Sbjct: 154 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 213

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + ++++ ++ A +   A     E+A  LFNE+   GI   +  F  +L+  +  G +
Sbjct: 214 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 273

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +G  +   +      S Q +    ++ +  R G +  A  +   M  + N + W S++ 
Sbjct: 274 GKGEQIHGRLLKGGYKSNQCI-CNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMIT 331

Query: 650 ACQKH 654
              KH
Sbjct: 332 GFAKH 336


>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/562 (41%), Positives = 358/562 (63%), Gaps = 5/562 (0%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML--LHGPRPDRVTMLS 345
           G +D A  +F   +  N  +   ++  +       E+L +   ML  L+       ++ S
Sbjct: 55  GGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPS 114

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A  +L     GR  HG VL+  L     + N+M+ MY+  G+ E+A R+FD M N+ 
Sbjct: 115 VLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRD 174

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           VVSWNS+IAG +K G++E A++VF  M  +D ++W +M+    Q     +A++LFR MLS
Sbjct: 175 VVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLS 234

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ-LATALVDMFARCGDPQ 524
             ++ D   +V V SA   LG ++  KW++AY+  N I      + +AL+DM+++CG  +
Sbjct: 235 LGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIE 294

Query: 525 RAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
            A  VFR +  +R++  W + I  +A+ G   +A+++F EM R  I+P+ I F+G+L+ C
Sbjct: 295 NAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTC 354

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SHGGLV +G   F SM + + + P+I HYGCM+DL GRAG L +AL +I++MP E + + 
Sbjct: 355 SHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLA 414

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           W ++L+A  KH +++I   AA R  EL P+ S  +VLLSNIYA AG+W +VA++RL M++
Sbjct: 415 WKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQ 474

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN-NISSMLREMNCRLRDAGYVPDLTNVLL 762
           +G++K+ G SS+ VNGKVHEF  G E     +  + + + E+  RL+  GY PDLT VLL
Sbjct: 475 RGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLL 534

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           D++++ K+ LL+ HSEK+A+AFGLI  +K+ PI +VKNLR+CCDCH F KLVSKVY+R+I
Sbjct: 535 DIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQI 594

Query: 823 IVRDNNRFHFFRQGSCSCSDFW 844
           I+RD NRFH F  G CSC+++W
Sbjct: 595 IMRDQNRFHHFENGCCSCNEYW 616



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 215/440 (48%), Gaps = 56/440 (12%)

Query: 28  TTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           T    +P +  L  CK+L EL+Q H  ++K  L +    +S+++  C+  G    L YA 
Sbjct: 2   TAISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYAS 61

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG-----FGILPDKFTFP 142
             F      N      F++ +LI+G+S     VE++ LY  +        G+   +F+ P
Sbjct: 62  SVFSRIQHPNS-----FIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV---EFSIP 113

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE---- 198
            VL AC K  AF EG QVHG ++K     D FV N ++  Y + G+I   RRVFD     
Sbjct: 114 SVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNR 173

Query: 199 ---------------------------MSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
                                      MS+++VV+WTS+I A  +   P +A+ LF EM+
Sbjct: 174 DVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREML 233

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK-ANALMVNALVDMYMKCGAV 290
             G++P+   +V V+SA A L  +E G  + AY+    ++ ++  + +AL+DMY KCG +
Sbjct: 234 SLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYI 293

Query: 291 DTAKQLFGECKD-RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           + A  +F      RN+   N+++S     GLAREAL I  EM      P+ +T L  +S 
Sbjct: 294 ENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLST 353

Query: 350 SAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            +  G +  G+     M   Y +   ++ +      MID++ + G+ E A  +  +M  +
Sbjct: 354 CSHGGLVEEGQFYFESMHEKYKIVPRIQHY----GCMIDLFGRAGRLEDALGVIQNMPFE 409

Query: 405 T-VVSWNSLIAGLIKNGDVE 423
             +++W ++++  +K+G +E
Sbjct: 410 ADLLAWKAILSASMKHGHIE 429


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/683 (37%), Positives = 388/683 (56%), Gaps = 37/683 (5%)

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-RDLPKEAV 224
           ++G+ R+ F+ N LI+ Y +C    D   VF  +  +NV SWT ++ A A  RD  +   
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDR--C 60

Query: 225 YLFFE-MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           +LFF  M+ +GI P  V +   +SAC   + + +G  +   I   G++  +++  ALV +
Sbjct: 61  WLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSL 120

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y K G    A  +F     R++V  + +++ Y R G  REAL +  +M L G  P++VT+
Sbjct: 121 YGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTL 180

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S + A A LGDL  G + H  V   G++    +   ++++Y KCG+ E A   F  +  
Sbjct: 181 VSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVE 240

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K VV+W+++ A   +N                               +   +A+ +   M
Sbjct: 241 KNVVAWSAISAAYARN-------------------------------DRNRDAIRVLHRM 269

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE--KNGIHCDMQLATALVDMFARCG 521
             E +  +  T V V  AC  + AL   + I+  I     G+  D+ + TALV+M+++CG
Sbjct: 270 DLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCG 329

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           +   A  +F ++   D+  W + I   A  G  E+A+ELF  M  +G++P  I F  VL 
Sbjct: 330 NLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLF 389

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH G+++QG   F S    HG+ P+  H+GCMVDLLGRAG + ++ DL+  MP EP+ 
Sbjct: 390 ACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHP 449

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           V W + L AC+ ++N+D A +AAE + +LDP K   +VLLSN+YA AG+W++VAR+R  M
Sbjct: 450 VAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAM 509

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           +     K  G S IEV  +VHEF SGD  HP +  I + L+ +   ++ AGYVPD   VL
Sbjct: 510 QLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVL 569

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            DV ++ K+ ++ +HSEKLAMAF L++T +  PIRVVKNLR+C DCH+ +K +SK+ +RE
Sbjct: 570 HDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNRE 629

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+VRD NRFH F+ G+CSC D+W
Sbjct: 630 IVVRDCNRFHRFQNGACSCGDYW 652



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 212/431 (49%), Gaps = 37/431 (8%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI P +      L+ACT +     G  +  AI+  G + +  V+  L++ YG+ G   D 
Sbjct: 71  GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDA 130

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             VF  MS R+VV+W++++ A AR   P+EA+ LF +M  +G+ PN VT+V  + ACA L
Sbjct: 131 ASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 190

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            +L  G  +   ++  G+++  ++  ALV++Y KCG ++ A + FG+  ++N+V  + I 
Sbjct: 191 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAIS 250

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG--YVLRNG 370
           + Y R    R+A+ +L  M L G  P+  T +S + A A +  L  GR  H   +VL  G
Sbjct: 251 AAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGG 310

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           LE    +   +++MY KCG   +A  +FD +++  +V WNSLIA   ++G  E       
Sbjct: 311 LESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTE------- 363

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                                   +A+ELF  M  E ++   +T   V  AC + G LD 
Sbjct: 364 ------------------------KALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQ 399

Query: 491 A-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM--EKRDVSAWTAAIGA 547
             K   ++I  +GI  + +    +VD+  R G    +  +   M  E   V AW A +GA
Sbjct: 400 GRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPV-AWMAFLGA 458

Query: 548 MAMEGNGEQAV 558
                N + A+
Sbjct: 459 CRTYRNMDGAI 469



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 137/257 (53%), Gaps = 2/257 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +++++  Y+  G   EA+ L+ ++   G+ P+K T    L+AC        G  +H  + 
Sbjct: 145 WSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVE 204

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             G    V V   L+N YG+CG I      F ++ E+NVV+W+++  A AR D  ++A+ 
Sbjct: 205 AQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIR 264

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL--GMKANALMVNALVDM 283
           +   M  EG+ PNS T V V+ ACA +  L+ G R+   I  L  G++++  ++ ALV+M
Sbjct: 265 VLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNM 324

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG +  A  +F +    +LVL N++++   + G   +AL + + M L G +P  +T 
Sbjct: 325 YSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITF 384

Query: 344 LSAVSASAQLGDLLCGR 360
            S + A +  G L  GR
Sbjct: 385 TSVLFACSHAGMLDQGR 401



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 45/410 (10%)

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           ++ELG   N  + N L+D+Y KC   D A  +F   + +N+     +++ +         
Sbjct: 1   MEELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRC 60

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
                 MLL G  P  V +   +SA     ++  GR     +L  G+E    +   ++ +
Sbjct: 61  WLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSL 120

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y K G    A  +F  MS++ VV+W++++A   +NG                        
Sbjct: 121 YGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHP---------------------- 158

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
                     EA+ LFR M  + +  ++VT+V    AC  LG L     ++  +E  GI 
Sbjct: 159 ---------REALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQ 209

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
             + + TALV+++ +CG  + A + F ++ +++V AW+A   A A       A+ + + M
Sbjct: 210 SGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRM 269

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH----GVSPQIVHYGCMVDLLG 620
             +G+ P+S  FV VL AC+    + QG    R    IH    G+   +     +V++  
Sbjct: 270 DLEGLAPNSTTFVSVLDACAAIAALKQG---RRIHERIHVLGGGLESDVYVLTALVNMYS 326

Query: 621 RAG---LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
           + G   L G   D I  + +    V+W SL+A   +H   + A    ER+
Sbjct: 327 KCGNLALAGNMFDKIAHLDL----VLWNSLIATNAQHGQTEKALELFERM 372



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 21/196 (10%)

Query: 29  TPKDSPSIGSLKNCKTLNELKQ-----PHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
            P  +  +  L  C  +  LKQ        H+L  GL      ++ +V   ++ G   +L
Sbjct: 275 APNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCG---NL 331

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
             A   FD           L ++NSLI   +  G   +A+ L+  +   G+ P   TF  
Sbjct: 332 ALAGNMFDKI-----AHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTS 386

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE----NCLINFYGECGDIVDGRRVFDEM 199
           VL AC+ +    +G +     V    D  +F E     C+++  G  G IVD   +   M
Sbjct: 387 VLFACSHAGMLDQGRK---HFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHM 443

Query: 200 S-ERNVVSWTSLICAC 214
             E + V+W + + AC
Sbjct: 444 PFEPHPVAWMAFLGAC 459


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/655 (36%), Positives = 383/655 (58%), Gaps = 35/655 (5%)

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           +VFD+M ERN+V+WT +I   A+    ++A+ LF +M   G  P+  T   V+SAC +L 
Sbjct: 11  KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKC---GAVDTAKQLFGECKDRNLVLCNT 310
            L LG ++ + +  LG+  +  +  +LVDMY KC   G+VD ++++F +  + N++    
Sbjct: 71  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130

Query: 311 IMSNYVRLG-LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           I++ Y + G   +EA+ +  +M+    RP+  +  S + A   L D   G   + Y ++ 
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G+   + + N++I MY + G+                               +E AR+ F
Sbjct: 191 GIASVNCVGNSLISMYARSGR-------------------------------MEDARKAF 219

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
             +  ++ +S+N ++ G  +    EEA  LF  +    I +   T   + S    +GA+ 
Sbjct: 220 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 279

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
             + I+  + K G   +  +  AL+ M++RCG+ + A QVF  ME R+V +WT+ I   A
Sbjct: 280 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 339

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
             G   +A+E+F++ML  G KP+ I +V VL+ACSH G++++G   F SM   HG+ P++
Sbjct: 340 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 399

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HY CMVDLLGR+GLL EA++ I SMP+  + ++W +LL AC+ H N ++  +AAE I E
Sbjct: 400 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 459

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
            +P+    ++LLSN++ASAG+W +V ++R  MKE+ + K  G S IEV  +VH F  G+ 
Sbjct: 460 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 519

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SHP+   I   L ++  ++++ GY+PD   VL D++E++K+  L  HSEK+A+AFGLIST
Sbjct: 520 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 579

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S++ PIR+ KNLR+C DCH+  K +S    REI+VRD+NRFH  + G CSC+D+W
Sbjct: 580 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 246/493 (49%), Gaps = 44/493 (8%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A K FD   + N  + TL     +I  ++ +G   +AI L++++   G +PD+FT+  VL
Sbjct: 9   AYKVFDKMPERNLVTWTL-----MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 63

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC---GDIVDGRRVFDEMSER 202
           +ACT+      G Q+H  ++++G   DV V   L++ Y +C   G + D R+VF++M E 
Sbjct: 64  SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 123

Query: 203 NVVSWTSLICACARR-DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           NV+SWT++I A A+  +  KEA+ LF +M+   I+PN  +   V+ AC  L +   G++V
Sbjct: 124 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 183

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            +Y  +LG+ +   + N+L+ MY + G ++ A++ F    ++NLV  N I+  Y +   +
Sbjct: 184 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 243

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EA  + +E+   G      T  S +S +A +G +  G   HG +L+ G +    ICN +
Sbjct: 244 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 303

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           I MY +CG  E A ++F+ M ++ V+SW S+I G  K+G                     
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG--------------------- 342

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEK 500
                         A+E+F  ML    K + +T V V SAC ++G + +  K   +  ++
Sbjct: 343 ----------FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 392

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVE 559
           +GI   M+    +VD+  R G    AM+    M    D   W   +GA  + GN E    
Sbjct: 393 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 452

Query: 560 LFNEMLRQGIKPD 572
               +L Q  +PD
Sbjct: 453 AAEMILEQ--EPD 463



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 165/320 (51%), Gaps = 9/320 (2%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L  C  L  L   KQ H  +++ GL         +V   A+     S+  ++K F+   +
Sbjct: 63  LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 122

Query: 96  DNETSATLFMYNSLIRGYSCIG-LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
            N  S     + ++I  Y+  G    EAI L+ ++    I P+ F+F  VL AC   S  
Sbjct: 123 HNVMS-----WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 177

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G QV+   VK+G      V N LI+ Y   G + D R+ FD + E+N+VS+ +++   
Sbjct: 178 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 237

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A+    +EA  LF E+ + GI  ++ T   ++S  A +  +  G+++   + + G K+N 
Sbjct: 238 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 297

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + NAL+ MY +CG ++ A Q+F E +DRN++   ++++ + + G A  AL +  +ML  
Sbjct: 298 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 357

Query: 335 GPRPDRVTMLSAVSASAQLG 354
           G +P+ +T ++ +SA + +G
Sbjct: 358 GTKPNEITYVAVLSACSHVG 377



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 169/365 (46%), Gaps = 35/365 (9%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A ++F +  +RNLV    +++ + +LG AR+A+ +  +M L G  PDR T  S +SA  +
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC---GKQEMACRIFDHMSNKTVVSW 409
           LG L  G+  H  V+R GL     +  +++DMY KC   G  + + ++F+ M    V+SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            ++I    ++G+ +                              +EA+ELF  M+S  I+
Sbjct: 129 TAIITAYAQSGECD------------------------------KEAIELFCKMISGHIR 158

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +  +   V  ACG L      + +Y+Y  K GI     +  +L+ M+AR G  + A + 
Sbjct: 159 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 218

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + ++++ ++ A +   A     E+A  LFNE+   GI   +  F  +L+  +  G +
Sbjct: 219 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 278

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +G  +   +      S Q +    ++ +  R G +  A  +   M  + N + W S++ 
Sbjct: 279 GKGEQIHGRLLKGGYKSNQCI-CNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMIT 336

Query: 650 ACQKH 654
              KH
Sbjct: 337 GFAKH 341


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/606 (39%), Positives = 356/606 (58%), Gaps = 36/606 (5%)

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD--MYMKCGAVDTAKQLFG 298
           ++V  I  C ++ +L+    + A++    +  +  + + L++       G V  A ++F 
Sbjct: 9   SLVAAIKRCTRVGDLK---AIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFS 65

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
                NL + NTI+  Y        A+A+  +M L G  P+  T    + A  +L  L  
Sbjct: 66  CTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCE 125

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G+  H  +++ GL+    + N +I +Y  CG  + AC +FD                   
Sbjct: 126 GQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFD------------------- 166

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
                       EMP  D  SW+TM+ G  Q     EA++LFR M +E +  D  T+  V
Sbjct: 167 ------------EMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASV 214

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
              CG LGALDL KW+++Y++K G+  D+ L TALV M+++CG    A++VF+ M +RDV
Sbjct: 215 VGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDV 274

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
           +AW+  I   A+ G+GE+A++LF+ M R    P+ + F  VL+ACSH GLV +G  +F +
Sbjct: 275 TAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFET 334

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M   + ++PQI HYGCMVDL  RAG++G A   I++MP+EPN V+W +LL AC+ H   D
Sbjct: 335 MWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKD 394

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +  + + +I +LDP     +VL+SN+YAS G+W++V +VR  MK++  +K  G SSIE+N
Sbjct: 395 LGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEIN 454

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
             VH+F  GDESHPE   I  ML +M  +L+  G+V    +VL D+DE+EK+Y L  HSE
Sbjct: 455 FMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSE 514

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           +LA+A+GL+ T    PIR+VKNLR+C DCH   KL+S+VY+REIIVRD  RFH FR+  C
Sbjct: 515 RLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGC 574

Query: 839 SCSDFW 844
           SC+D+W
Sbjct: 575 SCNDYW 580



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 196/391 (50%), Gaps = 16/391 (4%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           + ++K C  + +LK    H+++  L       SK++ + A +     + YA + F     
Sbjct: 11  VAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSA-VTLSGHVAYAHRIFSCTHH 69

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            N     LFM+N++IRGYS     + AI+LY ++   GI P+ +TF FVL AC K     
Sbjct: 70  PN-----LFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLC 124

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           EG ++H  IVK+G D +  + N LI  Y  CG +     +FDEM E +  SW++++   A
Sbjct: 125 EGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYA 184

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +     EA+ LF EM  E +  ++ T+  V+  C  L  L+LG  V +Y+D+ G+K + +
Sbjct: 185 QNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVV 244

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  ALV MY KCG++D A ++F    +R++   +T+++ Y   G   +AL + D M    
Sbjct: 245 LGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSK 304

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
             P+ VT  S +SA +  G +  G      M   Y +   ++ +      M+D++ + G 
Sbjct: 305 TIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHY----GCMVDLFCRAGM 360

Query: 391 QEMACRIFDHMS-NKTVVSWNSLIAGLIKNG 420
              A +    M     VV W +L+     +G
Sbjct: 361 VGHAHKFIQTMPIEPNVVLWRTLLGACKTHG 391



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 195/454 (42%), Gaps = 45/454 (9%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC--GDIVDGRR 194
           D+ +    +  CT+     + +Q H  +V+    +D F+ + LI        G +    R
Sbjct: 6   DQGSLVAAIKRCTRVGDL-KAIQAH--MVRANLTQDTFLTSKLIESSAVTLSGHVAYAHR 62

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F      N+  W ++I   +  D P  A+ L+ +M   GI PNS T   V+ AC KL  
Sbjct: 63  IFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLR 122

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G  + + I ++G+     +VN L+ +Y  CG +D A  +F E  + +    +T++S 
Sbjct: 123 LCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSG 182

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y + G A EAL +  EM       D  T+ S V     LG L  G+  H Y+ + G++  
Sbjct: 183 YAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKID 242

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             +   ++ MY KCG  + A ++F  M+ + V +W+++IAG   +G  E A ++F  M  
Sbjct: 243 VVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKR 302

Query: 435 RDHI----SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
              I    ++ ++L   +   + E+  ++F  M +E     ++   G             
Sbjct: 303 SKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYG------------- 349

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMA 549
                                 +VD+F R G    A +  + M  + +V  W   +GA  
Sbjct: 350 ---------------------CMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACK 388

Query: 550 MEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLTA 582
             G  +    +  ++L+     P++ V V  + A
Sbjct: 389 THGYKDLGEHISRKILKLDPSSPENYVLVSNVYA 422


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 402/744 (54%), Gaps = 36/744 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+LIR YS  G    AI LY  +  F + P+K+TFPFVL AC+  +    G  +H    
Sbjct: 67  YNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAA 126

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
            +G   D+FV   LI+ Y  C        VF +M  R+VV+W +++   A   +   A+ 
Sbjct: 127 AVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 186

Query: 226 LFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN---ALMVNALV 281
              +M + G ++PN+ T+V ++   A+   L  G  V AY     +  N    L+  AL+
Sbjct: 187 HLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALL 246

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDR 340
           DMY KC  +  A ++F     RN V  + ++  +V      EA  +  +ML+ G      
Sbjct: 247 DMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSA 306

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            ++ SA+   A L DL  G   H  + ++G+    +  N+++ MY K             
Sbjct: 307 TSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAK------------- 353

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
                        AGLI       A  +F E+  +D IS+  +L G  Q    EEA  +F
Sbjct: 354 -------------AGLINE-----ATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVF 395

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
           + M +  ++ D  TMV +  AC +L AL   +  +  +   G+  +  +  +L+DM+A+C
Sbjct: 396 KKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKC 455

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           G    + QVF +M  RD+ +W   I    + G G++A  LF  M  QG +PD + F+ ++
Sbjct: 456 GRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLI 515

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
            ACSH GLV +G H F +MT  +G+ P++ HY CMVDLL R G L EA   I+SMP++ +
Sbjct: 516 AACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKAD 575

Query: 641 DVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQ 700
             +WG+LL AC+ H+N+D+    +  I +L PE +G  VLLSNI+++AG++   A VR+ 
Sbjct: 576 VRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRII 635

Query: 701 MKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNV 760
            K +G +K PG S IE+NG +H F  GD+SHP   +I   L  +   ++  GY  D + V
Sbjct: 636 QKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFV 695

Query: 761 LLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDR 820
           L D++E+EK+  L +HSEKLA+AFG++S ++   I V KNLR+C DCH+  K ++ V +R
Sbjct: 696 LQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNR 755

Query: 821 EIIVRDNNRFHFFRQGSCSCSDFW 844
            IIVRD NRFH F+ G CSC DFW
Sbjct: 756 TIIVRDANRFHHFKNGQCSCGDFW 779



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 223/503 (44%), Gaps = 69/503 (13%)

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G +   R+VFD +   +  ++ +LI A + R     A+ L+  M+   + PN  T   V+
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            AC+ L +L  G  + A+   +G+  +  +  AL+D+Y++C     A  +F +   R++V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 307 LCNTIMSNYVRLGLAREALA-ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
             N +++ Y   G+   A+A +LD     G RP+  T++S +   AQ G L  G   H Y
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 366 VLRNGLEGWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
            LR  L+  +    I   ++DMY KC     ACR+F  M+ +  V+W++LI         
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALI--------- 277

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA-SA 481
                                 GG    +   EA  LF+ ML E +     T V  A   
Sbjct: 278 ----------------------GGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRV 315

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  L  L +   ++A + K+GIH D+    +L+ M+A+ G    A  +F  +  +D  ++
Sbjct: 316 CASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISY 375

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA-----------CSHGGLVN 590
            A +      G  E+A  +F +M    ++PD    V ++ A           CSHG ++ 
Sbjct: 376 GALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVII 435

Query: 591 QGWHL----FRSMTDIHG------VSPQ---------IVHYGCMVDLLGRAGLLGEALDL 631
           +G  L      S+ D++       +S Q         IV +  M+   G  GL  EA  L
Sbjct: 436 RGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTL 495

Query: 632 IKSMP---VEPNDVIWGSLLAAC 651
             SM     EP+DV +  L+AAC
Sbjct: 496 FLSMKNQGFEPDDVTFICLIAAC 518



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 4/243 (1%)

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W   +   I  G +  AR+VF  +P  D  ++N ++   +    F  A++L+R ML  R+
Sbjct: 36  WQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRV 95

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             ++ T   V  AC  L  L   + I+A+    G+H D+ ++TAL+D++ RC     A  
Sbjct: 96  PPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAAN 155

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAV-ELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           VF +M  RDV AW A +   A  G    A+  L +   R G++P++   V +L   +  G
Sbjct: 156 VFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHG 215

Query: 588 LVNQGW--HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            + QG   H +     +     Q++    ++D+  +   L  A  +   M V  N+V W 
Sbjct: 216 ALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR-NEVTWS 274

Query: 646 SLL 648
           +L+
Sbjct: 275 ALI 277



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 158/373 (42%), Gaps = 36/373 (9%)

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           ++ ++  G +  A+Q+F      +    N ++  Y   G    A+ +   ML     P++
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T    + A + L DL  GR  H +    GL     +   +ID+Y++C +   A  +F  
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  + VV+WN+++AG   +G    A     +M  R         GGL             
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDR---------GGL------------- 197

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ---LATALVDMF 517
                   + +  T+V +       GAL     ++AY  +  +  + +   + TAL+DM+
Sbjct: 198 --------RPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMY 249

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+C     A +VF  M  R+   W+A IG   +     +A  LF +ML +G+   S   V
Sbjct: 250 AKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSV 309

Query: 578 G-VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
              L  C+    +  G  L  ++    G+   +     ++ +  +AGL+ EA  L   + 
Sbjct: 310 ASALRVCASLADLRMGTQL-HALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA 368

Query: 637 VEPNDVIWGSLLA 649
           ++ + + +G+LL+
Sbjct: 369 IK-DTISYGALLS 380



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 17/231 (7%)

Query: 30  PKDSPSIGSLKNCKTLNELKQPHCH---ILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  +  +  +  C  L  L+   C    ++ +GL  + S  + ++   A+ G  +    +
Sbjct: 405 PDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRID---LS 461

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ FD     +  S     +N++I GY   GLG EA +L++ +   G  PD  TF  ++ 
Sbjct: 462 RQVFDKMPARDIVS-----WNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIA 516

Query: 147 ACTKSSAFGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNV 204
           AC+ S    EG      +  K G    +    C+++     G + +  +    M  + +V
Sbjct: 517 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADV 576

Query: 205 VSWTSLICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             W +L+ AC      DL K+   +  ++  EG   N V +  + SA  + 
Sbjct: 577 RVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTG-NFVLLSNIFSAAGRF 626


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/729 (35%), Positives = 397/729 (54%), Gaps = 53/729 (7%)

Query: 169 FDR----DVFVENCLINFYGECGDIVDGRRVFD--EMSERNVVSWTSLICACARRDLPKE 222
           FD+    D+     +++ Y   G+I    ++F+   MS R+ VS+ ++I A +       
Sbjct: 54  FDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHA 113

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG-DRVCAYIDELGMKANALMVNALV 281
           A+ LF +M   G  P+  T   V+ A + + + E    ++   + + G  +   ++NAL+
Sbjct: 114 ALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALM 173

Query: 282 DMYMKCGA---------VDTAKQLFGECK------------------------------- 301
             Y+ C +         +  A++LF E                                 
Sbjct: 174 SCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEG 233

Query: 302 --DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
             D   V  N ++S YV  G   EA  +L  M   G + D  T  S +SA++  G    G
Sbjct: 234 MTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIG 293

Query: 360 RMCHGYVLRNGLEGWD----SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           R  H YVLR  ++       S+ N +I +Y +CGK   A R+FD M  K +VSWN++++G
Sbjct: 294 RQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSG 353

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
            +    +E A  +F EMP R  ++W  M+ GL Q    EE ++LF  M  E ++      
Sbjct: 354 CVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAY 413

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
            G  ++C  LG+LD  + +++ I + G    + +  AL+ M++RCG  + A  VF  M  
Sbjct: 414 AGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY 473

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
            D  +W A I A+A  G+G QA++L+ +ML++ I PD I F+ +L+ACSH GLV +G H 
Sbjct: 474 VDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHY 533

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           F +M   +G++P+  HY  ++DLL RAG+  EA ++ +SMP EP   IW +LLA C  H 
Sbjct: 534 FDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHG 593

Query: 656 NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
           N+++   AA+R+ EL P++ G ++ LSN+YA+ G+W  VARVR  M+E+G++K PG S I
Sbjct: 594 NMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWI 653

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           EV   VH F   D  HPE++ +   L ++   +R  GYVPD   VL D++ ++K+Y LS 
Sbjct: 654 EVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALST 713

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+ +G++       IRV KNLR+C DCH+  K +SKV DREIIVRD  RFH FR 
Sbjct: 714 HSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRN 773

Query: 836 GSCSCSDFW 844
           G CSCS++W
Sbjct: 774 GECSCSNYW 782



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/486 (24%), Positives = 205/486 (42%), Gaps = 84/486 (17%)

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           A+L +      V A+I   G K   L++N L+D Y K   +  A+ LF +    ++V   
Sbjct: 7   AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66

Query: 310 TIMSNYVRLG---LARE------------------------------ALAILDEMLLHGP 336
           T++S Y   G   LA +                              AL +  +M   G 
Sbjct: 67  TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126

Query: 337 RPDRVTMLSAVSASAQLGD--LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM- 393
            PD  T  S + A + + D    C ++ H  V + G     S+ N ++  Y+ C    + 
Sbjct: 127 VPDPFTFSSVLGALSLIADEETHCQQL-HCEVFKWGALSVPSVLNALMSCYVSCASSPLV 185

Query: 394 --------ACRIFDHMS--NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
                   A ++FD      +   +W ++IAG ++N D+ +ARE+   M     ++WN M
Sbjct: 186 NSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAM 245

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G      +EEA +L R M S  I++D  T   V SA    G  ++ + ++AY+ +  +
Sbjct: 246 ISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVV 305

Query: 504 ----HCDMQLATALVDMFARCGD-----------P--------------------QRAMQ 528
               H  + +  AL+ ++ RCG            P                    + A  
Sbjct: 306 QPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANS 365

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +FR M  R +  WT  I  +A  G GE+ ++LFN+M  +G++P    + G + +CS  G 
Sbjct: 366 IFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGS 425

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           ++ G  L   +  + G    +     ++ +  R GL+  A  +  +MP   + V W +++
Sbjct: 426 LDNGQQLHSQIIQL-GHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY-VDSVSWNAMI 483

Query: 649 AACQKH 654
           AA  +H
Sbjct: 484 AALAQH 489



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 220/492 (44%), Gaps = 81/492 (16%)

Query: 49  KQPHCHILKQGLGHKPSYISKVV---CTCAQMGTFES---LTYAQKAFDY---------- 92
           +Q HC + K G    PS ++ ++    +CA      S   +  A+K FD           
Sbjct: 151 QQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPA 210

Query: 93  -------YIKDNE-----------TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
                  Y+++++           T      +N++I GY   G   EA  L   +   GI
Sbjct: 211 WTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGI 270

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD----VFVENCLINFYGECGDIV 190
             D++T+  V++A + +  F  G QVH  +++          + V N LI  Y  CG +V
Sbjct: 271 QLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLV 330

Query: 191 DGRRVFDEMSERNVVSWTSLICACAR-----------RDLP------------------- 220
           + RRVFD+M  +++VSW +++  C             R++P                   
Sbjct: 331 EARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGF 390

Query: 221 -KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            +E + LF +M  EG++P        I++C+ L +L+ G ++ + I +LG  ++  + NA
Sbjct: 391 GEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNA 450

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+ MY +CG V+ A  +F      + V  N +++   + G   +A+ + ++ML     PD
Sbjct: 451 LITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPD 510

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGY-VLR--NGLEGWDSICNTMIDMYMKCGKQEMACR 396
           R+T L+ +SA +  G +  GR  H +  +R   G+   +   + +ID+  + G    A  
Sbjct: 511 RITFLTILSACSHAGLVKEGR--HYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKN 568

Query: 397 IFDHMSNKTVVS-WNSLIAGLIKNGDVE----SAREVFSEMPGRD--HISWNTMLGGLTQ 449
           + + M  +     W +L+AG   +G++E    +A  +   MP +D  +IS + M   L Q
Sbjct: 569 VTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQ 628

Query: 450 ENMFEEAMELFR 461
            +      +L R
Sbjct: 629 WDEVARVRKLMR 640



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 142/623 (22%), Positives = 240/623 (38%), Gaps = 144/623 (23%)

Query: 52  HCHILKQGLGHKPSYISKVV-CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM----- 105
           H HIL  G    P  I++++   C       ++ YA+  FD   K +  +AT  +     
Sbjct: 19  HAHILTSGFKPFPLIINRLIDHYCKSF----NIPYARYLFDKIPKPDIVAATTMLSAYSA 74

Query: 106 -----------------------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
                                  YN++I  +S    G  A+ L+V++   G +PD FTF 
Sbjct: 75  AGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFS 134

Query: 143 FVLNACTK-SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG-------------- 187
            VL A +  +       Q+H  + K G      V N L++ Y  C               
Sbjct: 135 SVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAA 194

Query: 188 ----------------------------DIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
                                       D+V  R + + M++   V+W ++I     R  
Sbjct: 195 RKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGF 254

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-- 277
            +EA  L   M   GI+ +  T   VISA +      +G +V AY+    ++ +   V  
Sbjct: 255 YEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLS 314

Query: 278 --NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS---NYVRL-------------- 318
             NAL+ +Y +CG +  A+++F +   ++LV  N I+S   N  R+              
Sbjct: 315 VNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRS 374

Query: 319 --------------GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
                         G   E L + ++M L G  P       A+++ + LG L  G+  H 
Sbjct: 375 LLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHS 434

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
            +++ G +   S+ N +I MY +CG  E A  +F  M     VSWN++IA L ++G    
Sbjct: 435 QIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGH--- 491

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                                G+       +A++L+  ML E I  DR+T + + SAC +
Sbjct: 492 ---------------------GV-------QAIQLYEKMLKEDILPDRITFLTILSACSH 523

Query: 485 LGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWT 542
            G +   +  +  +    GI  +    + L+D+  R G    A  V   M  +     W 
Sbjct: 524 AGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWE 583

Query: 543 AAIGAMAMEGNGEQAVELFNEML 565
           A +    + GN E  ++  + +L
Sbjct: 584 ALLAGCWIHGNMELGIQAADRLL 606


>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
          Length = 575

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/468 (46%), Positives = 314/468 (67%)

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +CN M+  Y+  G+   A R+FD M  + +VSWN++I G   NG+V+ AREVF+ M  RD
Sbjct: 108 LCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRD 167

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
             SW++M+   T+    ++A+EL+R M +  +  D  TMV V SAC  +GAL +   ++ 
Sbjct: 168 AFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQ 227

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           ++E NG+  D++L TAL+DM+A+CGD + +++VF  M  +DV  W++ I  +A  G G  
Sbjct: 228 FVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHD 287

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A+ LF+ ML +G++P+ + F+GVL +C+H GLV+ G   F SM+ +HGV+P++ HYGCMV
Sbjct: 288 ALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMV 347

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
           DLLGR+G + EA  LI+ MP EP+ VIW +LL AC+ ++NV++A  A  ++  LDP   G
Sbjct: 348 DLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADG 407

Query: 677 VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
            +VLLSNIYA A  W  VA +R  ++ + I+++PG SSIE    +HEF SGD SHP    
Sbjct: 408 HYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKE 467

Query: 737 ISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIR 796
           I  ML EM  RLR AGY P    VL D+DEQ K+  L+ HSEKLA+AFGL++T     +R
Sbjct: 468 IYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLR 527

Query: 797 VVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + KNLR C DCHS  KL++ +Y+R++I+RD NRFH F +G CSC D+W
Sbjct: 528 ITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 29/389 (7%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP--DKFTFPFVLNACTKS 151
           +K    +A LF+  +L+  Y+  G    A       A F   P  D F    +L A    
Sbjct: 66  LKSGFAAADLFVRTALVEAYAKAGRADLA------RAAFDEAPRRDVFLCNVMLAAYVTR 119

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
               E  +V   +     +RD+   N +I+ Y   G++   R VF+ M +R+  SW+S++
Sbjct: 120 GEVAEARRVFDGMR----ERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMM 175

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
            A  +    K+A+ L+ EM    + P+  TMV V+SAC+ +  L +G  V  +++  G++
Sbjct: 176 SAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVE 235

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            +  +  AL+DMY KCG ++ + ++F     ++++  ++++      G   +AL++   M
Sbjct: 236 LDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRM 295

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGR-------MCHGYVLRNGLEGWDSICNTMIDM 384
           L  G +P+ VT +  + +   LG +  G+       + HG   +    G       M+D+
Sbjct: 296 LSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYG------CMVDL 349

Query: 385 YMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD-HISWNT 442
             + G  E A ++   M      V W +L+       +VE A E  +++   D H   + 
Sbjct: 350 LGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHY 409

Query: 443 MLGG--LTQENMFEEAMELFRVMLSERIK 469
           +L      Q N +E   E+ R +  ERI+
Sbjct: 410 VLLSNIYAQANSWEGVAEMRRTLRRERIQ 438



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 67/228 (29%)

Query: 491 AKWIYAYIEKNGIHC-DMQLATALVDMFARCGD-----------PQR------------- 525
           A  ++A   K+G    D+ + TALV+ +A+ G            P+R             
Sbjct: 58  AASLHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYV 117

Query: 526 -------AMQVFRRMEKRDVSAWTAAIGAMAMEG---------NG--------------- 554
                  A +VF  M +RD+ +W   I   A+ G         NG               
Sbjct: 118 TRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSA 177

Query: 555 -------EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
                  + A+EL+ EM    + PD    V VL+ACS  G +  G  + +   + +GV  
Sbjct: 178 YTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQ-FVESNGVEL 236

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKH 654
            +     ++D+  + G +  ++ +  SMPV+  DV+ W S++     H
Sbjct: 237 DVKLGTALIDMYAKCGDIENSVRVFHSMPVK--DVLTWSSMIIGLANH 282


>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/553 (43%), Positives = 337/553 (60%), Gaps = 1/553 (0%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           AK +F   ++    L N+++          EAL +   ML  G +PD +T    + A  +
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
                 G + H +V+++G E    I +++I +Y        A ++F+  S + VVSWN++
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I G +K+ ++  AR VF  M  RD ISWNTM+ G        EA+ LF  M +  +K   
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            T+V + SAC +LGALD    ++ YI  N I  +  + TALVDM+A+CG    A QVF  
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 358

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           ME +DV AW   I  MA+ GN ++A +LF EM   G++P+ I FV +L+ACSH G+V++G
Sbjct: 359 MESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEG 418

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
             L   M+  +G+ P++ HYGC++DLL RAG L EA++LI +MP+EPN    G+LL  C+
Sbjct: 419 QKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCR 478

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H N ++     +R+  L P  SG ++LLSNIYA+A KW +  +VR  MK  GI K+PG 
Sbjct: 479 IHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 538

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA-GYVPDLTNVLLDVDEQEKKY 771
           S IE+ G VH F +GD SHPE N I   L E++ RL+ A GY  D  NVLLD++E++K++
Sbjct: 539 SVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEH 598

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
            L+ HSEKLA+A+GL+       IR+VKNLR+C DCH   KL+SKVY REIIVRD NRFH
Sbjct: 599 ALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFH 658

Query: 832 FFRQGSCSCSDFW 844
            F  G CSC DFW
Sbjct: 659 HFEDGECSCLDFW 671



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 217/447 (48%), Gaps = 56/447 (12%)

Query: 28  TTPKDSPSIGSLKN-CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES-LTY 85
           T P  +P I SL N CKTL  LKQ H  I+     H   +    + + + +  F + L Y
Sbjct: 62  TNPPSNPQILSLFNPCKTLRHLKQVHAQIITH---HNSPFQLSALASLSALSPFPTFLAY 118

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+  F +++++   S    +YNSLIR  S     +EA+ LY  +   G+ PD  T+PFV+
Sbjct: 119 AKTIF-HHLQNPPPS----LYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVI 173

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI---------------- 189
            AC +SS    G+ VH  +VK GF+ D ++ + LI+ Y    D+                
Sbjct: 174 KACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVV 233

Query: 190 -----VDG----------RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
                +DG          R VFD M  R+V+SW ++I   A    P EA+ LF +M   G
Sbjct: 234 SWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVG 293

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           +KP   T+V ++SACA L  L+ G  +  YI++  ++ N+++  ALVDMY KCG +  A 
Sbjct: 294 VKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLAT 353

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           Q+F   + ++++  NTI++     G  +EA  +  EM   G  P+ +T ++ +SA +  G
Sbjct: 354 QVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAG 413

Query: 355 DLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS- 408
            +  G+     M   Y +   +E +  +    ID+  + G  E A  +   M  +   S 
Sbjct: 414 MVDEGQKLLDCMSSSYGIEPKVEHYGCV----IDLLARAGFLEEAMELIGTMPMEPNPSA 469

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGR 435
             +L+ G   +G+ E       EM G+
Sbjct: 470 LGALLGGCRIHGNFE-----LGEMVGK 491



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 189/397 (47%), Gaps = 64/397 (16%)

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            + +F  +       + SLI A +    P EA+ L+  M++ G+KP+ +T   VI AC +
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
                 G  V  ++ + G + ++ +V++L+ +Y     +  AKQLF  C  R++V  N +
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238

Query: 312 MSNYVR---LGLAR----------------------------EALAILDEMLLHGPRPDR 340
           +  YV+   +G AR                            EALA+ D+M   G +P  
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T++S +SA A LG L  G   H Y+  N +E    +   ++DMY KCGK  +A ++F+ 
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 358

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M +K V++WN++IAG+  +G+V+ A+++F EM                     +EA    
Sbjct: 359 MESKDVLAWNTIIAGMAIHGNVKEAQQLFKEM---------------------KEA---- 393

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
                  ++ + +T V + SAC + G +D  + +   +  + GI   ++    ++D+ AR
Sbjct: 394 ------GVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLAR 447

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
            G  + AM++   M  + + SA  A +G   + GN E
Sbjct: 448 AGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 484


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/741 (34%), Positives = 411/741 (55%), Gaps = 59/741 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHGA 163
           YN++I GY    L     +L   L  F  +P++  F++  +L    ++   G+  ++   
Sbjct: 83  YNAMISGY----LRNSKFNLARNL--FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDL 136

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +     ++DV   N L++ Y + G + + R VFD M E+N +SW  L+ A       +EA
Sbjct: 137 MP----EKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEA 192

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
             LF    E     + ++  C++    + +  +LGD    + D++ ++ +A+  N ++  
Sbjct: 193 CLLF----ESKSDWDLISWNCLMGGFVRKK--KLGDARWLF-DKMPVR-DAISWNTMISG 244

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y + G +  A++LF E   R++     ++S YV+ G+  EA    DEM    P  + V+ 
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSY 300

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
                                              N MI  Y++  K ++A  +F+ M  
Sbjct: 301 -----------------------------------NAMIAGYVQTKKMDIARELFESMPC 325

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           + + SWN++I G  + GD+  AR+ F  MP RD +SW  ++ G  Q   +EEA+ +F  +
Sbjct: 326 RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
             +   ++R T     S C  + AL+L K I+    K G      +  AL+ M+ +CG  
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A   F  +E++DV +W   +   A  G G QA+ +F  M   G+KPD I  VGVL+AC
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SH GL+++G   F SMT  +GV P   HY CM+DLLGRAG L EA DLI++MP +P    
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           WG+LL A + H N ++   AAE + +++P+ SG++VLLSN+YA++G+W +  ++R +M++
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
            G++K+PG S +EV  K+H F+ GD SHPE   I + L E++ ++R+ GYV     VL D
Sbjct: 626 IGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHD 685

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           V+E+EK+++L +HSEKLA+AFG+++     PIRV+KNLR+C DCHS  K +SK+  R II
Sbjct: 686 VEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLII 745

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           +RD++RFH F +G CSC D+W
Sbjct: 746 LRDSHRFHHFNEGFCSCGDYW 766



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 173/357 (48%), Gaps = 19/357 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L+ A++ FD        +  +F + +++ GY   G+  EA + + E+      P+K    
Sbjct: 251 LSQARRLFD-----ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM------PEKNEVS 299

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           +  NA        + + +   + +    R++   N +I  YG+ GDI   R+ FD M +R
Sbjct: 300 Y--NAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR 357

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + VSW ++I   A+    +EA+ +F E+ ++G   N  T  C +S CA +  LELG ++ 
Sbjct: 358 DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIH 417

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
               ++G      + NAL+ MY KCG++D A   F   +++++V  NT+++ Y R G  R
Sbjct: 418 GQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGR 477

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTM 381
           +AL + + M   G +PD +TM+  +SA +  G L  G      + ++ G+         M
Sbjct: 478 QALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCM 537

Query: 382 IDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMP 433
           ID+  + G+ E A  +  +M       SW +L+     +G+ E    +A  VF   P
Sbjct: 538 IDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 594



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 184/421 (43%), Gaps = 61/421 (14%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV---RLGLAREALAI 327
           + +++  NA++  Y++    + A+ LF +  +R+L   N +++ YV   RLG AR    +
Sbjct: 77  RRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDL 136

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           +       P  D V+  S +S  AQ G +   R     +       W    N ++  Y+ 
Sbjct: 137 M-------PEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISW----NGLLAAYVH 185

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
            G+ E AC +F+  S+  ++SWN L+ G ++   +  AR +F +MP RD ISWNTM+ G 
Sbjct: 186 NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCD 506
            Q     +A  LF     E    D  T   + S     G LD AK  +  + EKN +  +
Sbjct: 246 AQGGGLSQARRLF----DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYN 301

Query: 507 MQLA--------------------------TALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
             +A                            ++  + + GD  +A + F  M +RD  +
Sbjct: 302 AMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVS 361

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W A I   A  G+ E+A+ +F E+ + G   +   F   L+ C+    +  G        
Sbjct: 362 WAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG-------K 414

Query: 601 DIHGVSPQIVH-YGCMVD-----LLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQK 653
            IHG + ++ +  GC V      +  + G + EA D  +   +E  DV+ W ++LA   +
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEG--IEEKDVVSWNTMLAGYAR 472

Query: 654 H 654
           H
Sbjct: 473 H 473



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 57/261 (21%)

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           + GL++ G   F  M + + V+P   HY CM+DLLGR   L E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
           G+LL A + H N ++   AA+   ++ P+ SG+                      +M++ 
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSGIS---------------------KMRDV 857

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
           G++K+PG S  EV  K+H F+ G     E  NI   L E++ ++R+     + T      
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERT------ 910

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN-LRLCCDCHSFAKLVSKVYDREII 823
                   L + SE LA A G+++     P RV+K  + +C DC S  K +SK+  R I 
Sbjct: 911 --------LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           +RD++RF+   +  CSC ++W
Sbjct: 963 LRDSHRFN---ESICSCGEYW 980



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 24/285 (8%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  I  +M+ G  + A  +F+ M  ++ VS+N++I+G ++N     AR +F +MP RD  
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN ML G  +     +A  LF +M  +    D V+   + S     G +D A+ ++  +
Sbjct: 113 SWNVMLTGYVRNCRLGDARRLFDLMPEK----DVVSWNSLLSGYAQNGYVDEAREVFDNM 168

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            EKN I  +  LA      +   G  + A  +F      D+ +W   +G    +     A
Sbjct: 169 PEKNSISWNGLLAA-----YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDA 223

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP--QIVHYGCM 615
             LF++M  +    D+I +  +++  + GG ++Q   LF         SP   +  +  M
Sbjct: 224 RWLFDKMPVR----DAISWNTMISGYAQGGGLSQARRLFDE-------SPTRDVFTWTAM 272

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           V    + G+L EA      MP E N+V + +++A   + + +DIA
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMP-EKNEVSYNAMIAGYVQTKKMDIA 316



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 49/245 (20%)

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           ++ WN  I+  ++NG  +SA  VF+ MP R  +S+N M+ G  + + F  A  LF  M  
Sbjct: 49  ILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPE 108

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             +    V + G    C                                    R GD +R
Sbjct: 109 RDLFSWNVMLTGYVRNC------------------------------------RLGDARR 132

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
              +F  M ++DV +W + +   A  G  ++A E+F+ M  +    +SI + G+L A  H
Sbjct: 133 ---LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVH 185

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G + +   LF S +D       ++ + C++    R   LG+A  L   MPV  + + W 
Sbjct: 186 NGRIEEACLLFESKSDW-----DLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWN 239

Query: 646 SLLAA 650
           ++++ 
Sbjct: 240 TMISG 244


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/711 (36%), Positives = 394/711 (55%), Gaps = 47/711 (6%)

Query: 179 LINFYGECGDIVDGRRVFDEM--SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-I 235
           L+  Y     +      FD +  + R+ V   ++I A AR      AV +F  ++  G +
Sbjct: 94  LVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSL 153

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA----LMVNALVDMYMKC---- 287
           +P+  +   ++SA   L N+ +  R CA +    +K+ A     + NALV +YMKC    
Sbjct: 154 RPDDYSFTALLSAGGHLPNISV--RHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211

Query: 288 ------------------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
                                         G V  A+ +F E   +  V+ N ++S YV 
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR---NGL-EG 373
            G+A EA  +   M+L     D  T  S +SA A +G    G+  HG ++R   N + E 
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + N ++  Y KCG   +A RIFD+M+ K VVSWN++++G +++  ++ A EVF EMP
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
            ++ +SW  M+ G       E+A++LF  M SE +K    T  G  +ACG LGAL   K 
Sbjct: 392 YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++ +I + G         AL+ M+ARCG  + A  +F  M   D  +W A I A+   G+
Sbjct: 452 LHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGH 511

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G +A+ELF+ M+ +GI PD I F+ VLTAC+H GLV++G+  F SM    G+ P   HY 
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYT 571

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
            ++DLLGRAG +GEA DLIK+MP EP   IW ++L+ C+   ++++ A+AA+++ ++ P+
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G ++LLSN Y++AG W + ARVR  M+++G++K PG S IE   KVH F  GD  HPE
Sbjct: 632 HDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPE 691

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
            + +   L  +  ++R  GYVPD   VL D++  +K+++L  HSE+LA+ FGL++     
Sbjct: 692 AHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGA 751

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            + V+KNLR+C DCH+    +SK   REI+VRD  RFH F+ G CSC ++W
Sbjct: 752 TVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 214/467 (45%), Gaps = 68/467 (14%)

Query: 37  GSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY---- 92
           G L N  ++    Q HC +LK G G   S  + +V    +  + E+   A+K  D     
Sbjct: 168 GHLPNI-SVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNK 226

Query: 93  -----------YIKDNETSA--TLF---------MYNSLIRGYSCIGLGVEAISLYVELA 130
                      Y++  +  A  ++F         ++N++I GY   G+ VEA  L+  + 
Sbjct: 227 DDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMV 286

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM--GF--DRDVFVENCLINFYGEC 186
              +  D+FTF  VL+AC     F  G  VHG I+++   F  +  + V N L+ FY +C
Sbjct: 287 LERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKC 346

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACAR-----------RDLP--------------- 220
           G+I   RR+FD M+ ++VVSW +++                 ++P               
Sbjct: 347 GNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYV 406

Query: 221 -----KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                ++A+ LF +M  E +KP   T    I+AC +L  L+ G ++  +I +LG + +  
Sbjct: 407 HGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNS 466

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
             NAL+ MY +CGAV  A  +F    + + V  N ++S   + G  REAL + D M+  G
Sbjct: 467 AGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEG 526

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMA 394
             PDR++ L+ ++A    G +  G      + R+ G+   +     +ID+  + G+   A
Sbjct: 527 IYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEA 586

Query: 395 CRIFDHMSNKTVVS-WNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
             +   M  +   S W ++++G   +GD+E    +A ++F   P  D
Sbjct: 587 RDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/741 (34%), Positives = 411/741 (55%), Gaps = 59/741 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHGA 163
           YN++I GY    L     +L   L  F  +P++  F++  +L    ++   G+  ++   
Sbjct: 83  YNAMISGY----LRNSKFNLARNL--FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDL 136

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +     ++DV   N L++ Y + G + + R VFD M E+N +SW  L+ A       +EA
Sbjct: 137 MP----EKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEA 192

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
             LF    E     + ++  C++    + +  +LGD    + D++ ++ +A+  N ++  
Sbjct: 193 CLLF----ESKSDWDLISWNCLMGGFVRKK--KLGDARWLF-DKMPVR-DAISWNTMISG 244

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y + G +  A++LF E   R++     ++S YV+ G+  EA    DEM    P  + V+ 
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSY 300

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
                                              N MI  Y++  K ++A  +F+ M  
Sbjct: 301 -----------------------------------NAMIAGYVQTKKMDIARELFESMPC 325

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           + + SWN++I G  + GD+  AR+ F  MP RD +SW  ++ G  Q   +EEA+ +F  +
Sbjct: 326 RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
             +   ++R T     S C  + AL+L K I+    K G      +  AL+ M+ +CG  
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A   F  +E++DV +W   +   A  G G QA+ +F  M   G+KPD I  VGVL+AC
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SH GL+++G   F SMT  +GV P   HY CM+DLLGRAG L EA DLI++MP +P    
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           WG+LL A + H N ++   AAE + +++P+ SG++VLLSN+YA++G+W +  ++R +M++
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
            G++K+PG S +EV  K+H F+ GD SHPE   I + L E++ ++R+ GYV     VL D
Sbjct: 626 IGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHD 685

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           V+E+EK+++L +HSEKLA+AFG+++     PIRV+KNLR+C DCHS  K +SK+  R II
Sbjct: 686 VEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLII 745

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           +RD++RFH F +G CSC D+W
Sbjct: 746 LRDSHRFHHFNEGFCSCGDYW 766



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 173/357 (48%), Gaps = 19/357 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L+ A++ FD        +  +F + +++ GY   G+  EA + + E+      P+K    
Sbjct: 251 LSQARRLFD-----ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM------PEKNEVS 299

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           +  NA        + + +   + +    R++   N +I  YG+ GDI   R+ FD M +R
Sbjct: 300 Y--NAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR 357

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + VSW ++I   A+    +EA+ +F E+ ++G   N  T  C +S CA +  LELG ++ 
Sbjct: 358 DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIH 417

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
               ++G      + NAL+ MY KCG++D A   F   +++++V  NT+++ Y R G  R
Sbjct: 418 GQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGR 477

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTM 381
           +AL + + M   G +PD +TM+  +SA +  G L  G      + ++ G+         M
Sbjct: 478 QALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCM 537

Query: 382 IDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMP 433
           ID+  + G+ E A  +  +M       SW +L+     +G+ E    +A  VF   P
Sbjct: 538 IDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 594



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 184/421 (43%), Gaps = 61/421 (14%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV---RLGLAREALAI 327
           + +++  NA++  Y++    + A+ LF +  +R+L   N +++ YV   RLG AR    +
Sbjct: 77  RRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDL 136

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           +       P  D V+  S +S  AQ G +   R     +       W    N ++  Y+ 
Sbjct: 137 M-------PEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISW----NGLLAAYVH 185

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
            G+ E AC +F+  S+  ++SWN L+ G ++   +  AR +F +MP RD ISWNTM+ G 
Sbjct: 186 NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCD 506
            Q     +A  LF     E    D  T   + S     G LD AK  +  + EKN +  +
Sbjct: 246 AQGGGLSQARRLF----DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYN 301

Query: 507 MQLA--------------------------TALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
             +A                            ++  + + GD  +A + F  M +RD  +
Sbjct: 302 AMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVS 361

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W A I   A  G+ E+A+ +F E+ + G   +   F   L+ C+    +  G        
Sbjct: 362 WAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG-------K 414

Query: 601 DIHGVSPQIVH-YGCMVD-----LLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQK 653
            IHG + ++ +  GC V      +  + G + EA D  +   +E  DV+ W ++LA   +
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEG--IEEKDVVSWNTMLAGYAR 472

Query: 654 H 654
           H
Sbjct: 473 H 473



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 24/285 (8%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N  I  +M+ G  + A  +F+ M  ++ VS+N++I+G ++N     AR +F +MP RD  
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN ML G  +     +A  LF +M  +    D V+   + S     G +D A+ ++  +
Sbjct: 113 SWNVMLTGYVRNCRLGDARRLFDLMPEK----DVVSWNSLLSGYAQNGYVDEAREVFDNM 168

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            EKN I  +  LA      +   G  + A  +F      D+ +W   +G    +     A
Sbjct: 169 PEKNSISWNGLLAA-----YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDA 223

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP--QIVHYGCM 615
             LF++M  +    D+I +  +++  + GG ++Q   LF         SP   +  +  M
Sbjct: 224 RWLFDKMPVR----DAISWNTMISGYAQGGGLSQARRLFDE-------SPTRDVFTWTAM 272

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           V    + G+L EA      MP E N+V + +++A   + + +DIA
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMP-EKNEVSYNAMIAGYVQTKKMDIA 316



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 49/245 (20%)

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           ++ WN  I+  ++NG  +SA  VF+ MP R  +S+N M+ G  + + F  A  LF  M  
Sbjct: 49  ILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPE 108

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             +    V + G    C                                    R GD +R
Sbjct: 109 RDLFSWNVMLTGYVRNC------------------------------------RLGDARR 132

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
              +F  M ++DV +W + +   A  G  ++A E+F+ M  +    +SI + G+L A  H
Sbjct: 133 ---LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVH 185

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G + +   LF S +D       ++ + C++    R   LG+A  L   MPV  + + W 
Sbjct: 186 NGRIEEACLLFESKSDW-----DLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWN 239

Query: 646 SLLAA 650
           ++++ 
Sbjct: 240 TMISG 244


>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 640

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/577 (42%), Positives = 359/577 (62%), Gaps = 26/577 (4%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL-------DEMLLHGPRPDRVT 342
           +D A ++F +   RN    NTI+  +      +  +AI        DE +     P+R T
Sbjct: 68  LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFI----EPNRFT 123

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF---- 398
             S + A A+ G +  G+  HG  L+ G  G + + + ++ MY+ CG  + AC +F    
Sbjct: 124 FPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNI 183

Query: 399 ----------DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
                         +  VV WN +I G ++ GD ++AR +F +M  R  +SWNTM+ G +
Sbjct: 184 IEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 243

Query: 449 QENMFEEAMELFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
           Q   F++A+E+FR M   E I+ + VT+V V  A   LG+L+L +W++ Y E +GI  D 
Sbjct: 244 QNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDD 303

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            L +AL+DM+++CG  ++A+ VF R+ + +V  W+A I   A+ G    A++ F +M + 
Sbjct: 304 VLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 363

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G++P  + ++ +LTACSH GLV +G   F  M  + G+ P+I HYGCMVDLLGR GLL E
Sbjct: 364 GVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDE 423

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A + I +MP++P+DVIW +LL AC+ H+NV++    A  + ++ P  SG +V LSN+YAS
Sbjct: 424 AEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 483

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
            G W+ V+ +RL+MKE  IRK PG S I+++G +HEF   D+SHP    I+SML E++ +
Sbjct: 484 QGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDK 543

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           LR AGY P  T VLL+++E++K+  L +HSEK+A AFGLISTS   PIR+VKNLR+C DC
Sbjct: 544 LRLAGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDC 603

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           HS  KL+SKVY R+I VRD  RFH F+ GSCSC D+W
Sbjct: 604 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 184/372 (49%), Gaps = 55/372 (14%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF-ESLTYAQKAFDYYIKDN 97
           +  C+T+ +L Q H   +K G        ++++  CA        L YA K F+   + N
Sbjct: 23  INTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 82

Query: 98  ETSATLFMYNSLIRGYSCIG--LGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAF 154
                 F +N++IRG+S       + AI+L+ E+ +   I P++FTFP VL AC K+   
Sbjct: 83  -----CFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKI 137

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECG--------------------------- 187
            +G Q+HG  +K GF  D FV + L+  Y  CG                           
Sbjct: 138 QQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKR 197

Query: 188 --------DIVDG----------RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
                    ++DG          R +FD+M +R+VVSW ++I   ++    K+AV +F E
Sbjct: 198 DGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFRE 257

Query: 230 MVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           M + E I+PN VT+V V+ A ++L +LELG+ +  Y ++ G++ + ++ +AL+DMY KCG
Sbjct: 258 MKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 317

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            ++ A  +F      N++  + +++ +   G A +A+    +M   G RP  V  ++ ++
Sbjct: 318 IIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 377

Query: 349 ASAQLGDLLCGR 360
           A +  G +  GR
Sbjct: 378 ACSHAGLVEEGR 389



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 1/166 (0%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAF 154
           D     ++  +N++I GYS  G   +A+ ++ E+  G  I P+  T   VL A ++  + 
Sbjct: 225 DKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSL 284

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  +H      G   D  + + LI+ Y +CG I     VF+ +   NV++W+++I   
Sbjct: 285 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGF 344

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           A      +A+  F +M + G++P+ V  + +++AC+    +E G R
Sbjct: 345 AIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRR 390


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/711 (35%), Positives = 397/711 (55%), Gaps = 37/711 (5%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D+ TF  +L    K  +   G QVH   +K+G D  + V N LIN Y +       R VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL-QNL 255
           D MSER+++SW S+I   A+  L  EAV LF +++  G+KP+  TM  V+ A + L + L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
            L  +V  +  ++   +++ +  AL+D Y +   +  A+ LF E  + +LV  N +M+ Y
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGY 492

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG--LEG 373
            +     + L +   M   G R D  T+ +       L  +  G+  H Y +++G  L+ 
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
           W  + + ++DMY+KCG                               D+ +A+  F  +P
Sbjct: 553 W--VSSGILDMYVKCG-------------------------------DMSAAQFAFDSIP 579

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
             D ++W TM+ G  +    E A  +F  M    +  D  T+  +A A   L AL+  + 
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+A   K     D  + T+LVDM+A+CG    A  +F+R+E  +++AW A +  +A  G 
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G++ ++LF +M   GIKPD + F+GVL+ACSH GLV++ +   RSM   +G+ P+I HY 
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           C+ D LGRAGL+ +A +LI+SM +E +  ++ +LLAAC+   + +     A ++ EL+P 
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL 819

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
            S  +VLLSN+YA+A KW  +   R  MK   ++K PG S IEV  K+H F   D S+ +
Sbjct: 820 DSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQ 879

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I   +++M   ++  GYVP+    L+DV+E+EK+  L +HSEKLA+AFGL+ST  + 
Sbjct: 880 TELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPST 939

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           PIRV+KNLR+C DCH+  K ++KVY+REI++RD NRFH F+ G CSC D+W
Sbjct: 940 PIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 248/555 (44%), Gaps = 48/555 (8%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F F+ NA T SS    G   H  I+    + + F+ N LI+ Y +CG +   RRVFD+M 
Sbjct: 43  FGFLRNAIT-SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101

Query: 201 ERNVVSWTSLICACARR-----DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           +R++VSW S++ A A+      +  ++A  LF  + ++ +  + +T+  ++  C     +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
              +    Y  ++G+  +  +  ALV++Y+K G V   K LF E   R++VL N ++  Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVT--MLSAVSA----SAQLGDLLCGRMCHGY---V 366
           + +G   EA+ +       G  P+ +T  +L+ +S     + Q+     G         +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281

Query: 367 LRN-GLEGW-------------------DSICN--TMIDMYMKCGK-------QEMACRI 397
            RN GL  +                   D  C+  T I M     K       Q++ C  
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                +  +   NSLI    K      AR VF  M  RD ISWN+++ G+ Q  +  EA+
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
            LF  +L   +K D+ TM  V  A   L   L L+K ++ +  K     D  ++TAL+D 
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDA 461

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           ++R    + A  +F R    D+ AW A +       +G + ++LF  M +QG + D    
Sbjct: 462 YSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
             V   C     +NQG  +  +     G    +     ++D+  + G +  A     S+P
Sbjct: 521 ATVFKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579

Query: 637 VEPNDVIWGSLLAAC 651
           V P+DV W ++++ C
Sbjct: 580 V-PDDVAWTTMISGC 593


>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/490 (44%), Positives = 315/490 (64%), Gaps = 1/490 (0%)

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           +LL G + H    ++G      + +  + MY   G        F  + +  VV   +++ 
Sbjct: 140 NLLAGSV-HAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVTAMLG 198

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
            L   GDV++ARE+F  MP RDH++WN ML G  +     EA+ LF  M    + V  VT
Sbjct: 199 ALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVT 258

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +V V +AC  +GAL+   W+++Y+   G+   + L TALVDM+++CG    +M+VF  M 
Sbjct: 259 LVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMR 318

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           +R++  WT+A+  +AM G GE+ +ELF  M   G++P+ + FV VL  CS  GLV +G  
Sbjct: 319 ERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRA 378

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F SM D H V P + HYGCMVDL GRAG L +A+D I SMPVEP++ +WG+LL A + H
Sbjct: 379 CFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIH 438

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
            NVD+  +A  ++TE++ +    HVLLSNIYA +  W  V++VR  MK +G++K+PG S+
Sbjct: 439 NNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSA 498

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           IEV+GKVHEF  G +SHP   +I +ML EM+ RLR  GY  +   VL D++E+EK+  +S
Sbjct: 499 IEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFDIEEEEKEGAIS 558

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
            HSEKLA+AFGLI+  +   IR+VKNLR+C DCH + KL+SKV+DREI++RD NRFH F+
Sbjct: 559 LHSEKLALAFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDREIVMRDRNRFHHFK 618

Query: 835 QGSCSCSDFW 844
            G+CSC D+W
Sbjct: 619 HGACSCRDYW 628



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 178/402 (44%), Gaps = 63/402 (15%)

Query: 48  LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYN 107
           L++ H H+L  G    PS+ +  V + A       L+YA+          +  ATL  +N
Sbjct: 33  LREIHAHLLVSGRLASPSHHADFVASLASS---SHLSYARLLLP------QRPATLLAHN 83

Query: 108 SLIRGYS---CIGLGVEAISLYVELAGFGILPDKFTFPFV-------------------- 144
            L+R  +   C GL   A + + EL    + PD ++F F+                    
Sbjct: 84  GLLRALARGPCPGL---AFAAFRELP---LAPDHYSFTFLVRAATSLAAAASATPVPTDV 137

Query: 145 ----LNACTKSSAFGEG-----------VQVHGAIVKMGFDRDVFVE---------NCLI 180
               L     ++AF  G           V ++ A+  +G  R  F E           ++
Sbjct: 138 AVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVTAML 197

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
                 GD+   R +FD M +R+ V+W +++    R    +EA+ LF EM + G+  + V
Sbjct: 198 GALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEV 257

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T+V V++ACA++  LE G  V +Y+   GM+ +  +  ALVDMY KCG V  + ++F   
Sbjct: 258 TLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETM 317

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           ++RN+    + +S     G+  E L +   M   G  P+ VT ++ +   +  G +  GR
Sbjct: 318 RERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGR 377

Query: 361 MCHGYVL-RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
            C   +  ++ +E W      M+D+Y + G+ + A    + M
Sbjct: 378 ACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSM 419



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 36/293 (12%)

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           V A++      G VDTA++LF     R+ V  N +++ YVR+G +REAL + DEM   G 
Sbjct: 193 VTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGV 252

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
               VT++S ++A AQ+G L  G   H YV   G+    ++   ++DMY KCG   M+  
Sbjct: 253 AVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSME 312

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F+ M  + + +W S ++GL  NG                               M EE 
Sbjct: 313 VFETMRERNIYTWTSALSGLAMNG-------------------------------MGEEC 341

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVD 515
           +ELF+ M S  ++ + VT V V   C   G ++  +  +  + +K+ +   ++    +VD
Sbjct: 342 LELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVD 401

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           ++ R G    A+     M  +     W A + A  +  N   G+ A+    E+
Sbjct: 402 LYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEI 454


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/673 (38%), Positives = 378/673 (56%), Gaps = 40/673 (5%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           LP+   F  +L++C +S +      VH  I+   F  ++F++N LI+ YG+C  + D R+
Sbjct: 12  LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE---------------------- 232
           +FD M +RN  +W SLI    +     EA  LF  M E                      
Sbjct: 72  LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131

Query: 233 ---------EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
                    E    N  +    +SACA L +L +G +V A + +     +  M +AL+DM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG+V  A+++F    +RNLV  N++++ Y + G A EAL +   M+  G  PD VT+
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            S VSA A L  L  G   H  V++ N       + N ++DMY KC K   A R+FD MS
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            + VVS  S+++G  +   V++AR +FS+M  R+ +SWN ++ G TQ    EEA+ LFR+
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRL 371

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH------CDMQLATALVDM 516
           +  E I     T   + SAC  L  L L +  + ++ K G         D+ +  +L+DM
Sbjct: 372 LKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDM 431

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CG  +   +VF +M++RD  +W A I   A  G G +A+++F +ML  G KPD +  
Sbjct: 432 YMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTM 491

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVL ACSH GLV +G H F SM + HG+ P   HY CMVDLLGRAG L EA +LI++MP
Sbjct: 492 IGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMP 550

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           V P+ V+WGSLLAAC+ H N+++  +AAE++ E+DP  SG +VLLSN+YA  G+W +V R
Sbjct: 551 VNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVR 610

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR  M++QG+ K PG S IEV  +VH F   D+SHP    I S+L+ +  +++  GY+PD
Sbjct: 611 VRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 670

Query: 757 LTNVLLDVDEQEK 769
             N     DEQ K
Sbjct: 671 -ANDFEAYDEQSK 682



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 235/501 (46%), Gaps = 73/501 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS++ G++      E++  +V++     L ++++F   L+AC        G QVH  + 
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  +  DV++ + LI+ Y +CG +     VF  M ERN+V+W SLI    +     EA+ 
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNALVDMY 284
           +F  M++ G++P+ VT+  V+SACA L  L+ G ++ A + +    + + ++ NALVDMY
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294

Query: 285 MKCGAVDTAKQ-------------------------------LFGECKDRNLVLCNTIMS 313
            KC  V+ A++                               +F +   RN+V  N +++
Sbjct: 295 AKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIA 354

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE- 372
            Y + G   EAL +   +      P   T  + +SA A L DLL GR  H +VL+ G E 
Sbjct: 355 GYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEF 414

Query: 373 --GWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
             G +S   + N++IDMYMKCG  E   R+F+ M  +  VSWN++I G  +NG       
Sbjct: 415 QSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNG------- 467

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                                      EA+++FR ML    K D VTM+GV  AC + G 
Sbjct: 468 ------------------------YGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGL 503

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIG 546
           ++  +  +  +E++G+       T +VD+  R G    A  +   M    D   W + + 
Sbjct: 504 VEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLA 563

Query: 547 AMAMEGN---GEQAVELFNEM 564
           A  + GN   G+ A E   E+
Sbjct: 564 ACKVHGNIEMGKHAAEKLLEI 584



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 193/400 (48%), Gaps = 46/400 (11%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           S+  A++ F   I+ N     L  +NSLI  Y   G   EA+ ++V +   G+ PD+ T 
Sbjct: 197 SVACAEEVFSGMIERN-----LVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
             V++AC    A  EG+Q+H  +VK   F  D+ + N L++ Y +C  + + RRVFD MS
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVE---------------------------- 232
            RNVVS TS++   AR    K A ++F +M +                            
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRL 371

Query: 233 ---EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM------KANALMVNALVDM 283
              E I P   T   ++SACA L +L LG +   ++ + G       +++  + N+L+DM
Sbjct: 372 LKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDM 431

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           YMKCG+++   ++F + K+R+ V  N I+  Y + G   EAL I  +ML+ G +PD VTM
Sbjct: 432 YMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTM 491

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           +  + A +  G +  GR     +  +GL         M+D+  + G    A  + + M  
Sbjct: 492 IGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPV 551

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           N   V W SL+A    +G++E  +    ++   D   WN+
Sbjct: 552 NPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEID--PWNS 589



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 6/180 (3%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L  C  L +L   +Q H H+LKQG   +    S +    + +  +      +     + K
Sbjct: 388 LSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEK 447

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
             E       +N++I GY+  G G EA+ ++ ++   G  PD  T   VL AC+ +    
Sbjct: 448 MKERDCV--SWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVE 505

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
           EG     ++ + G         C+++  G  G + + + + + M    + V W SL+ AC
Sbjct: 506 EGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAAC 565


>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
 gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/607 (39%), Positives = 359/607 (59%), Gaps = 38/607 (6%)

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ-LFGECK 301
           + ++ AC  L  L    ++  +I +LG+  N L++     +     A D A   LF    
Sbjct: 33  LALLQACNALPKL---TQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEA 89

Query: 302 DRNL---VLCNTIMSNYVRLGLARE-ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
           D  L    L NT++  Y + G +++ ALA+   ML     P++ T    + A A L  L 
Sbjct: 90  DTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLN 149

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            G+  HG V++ G +    + NTM+ MY  C                             
Sbjct: 150 LGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCA---------------------------- 181

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
             G + SAR+VF EMP  D ++W+ M+GG  +     EA+ LFR M    +  D +TMV 
Sbjct: 182 --GGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVS 239

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
           + SAC  LGAL+L KWI AYIE++ IH  ++++ AL+DMFA+CGD  +A+++FR M ++ 
Sbjct: 240 MLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKT 299

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           + +WT+ I  MAM G G++A  LF EM   G+ PD + F+G+L+ACSH GLV +G   F 
Sbjct: 300 IVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFG 359

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           SM   + + P+I HYGCMVD+  R GL+ EAL+ +++MP+EPN VI  +L++AC+ H   
Sbjct: 360 SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEF 419

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
            +     + + + +P     +VLLSNIYA    W    ++R  M+ +G++K+PGS+ IE+
Sbjct: 420 KLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEI 479

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
           + +++EF +GD+SH +   I  M+ EM   ++ +GY P  + VLLD++E++K+  L+ HS
Sbjct: 480 DNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHS 539

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           EKLA+AFGL+ T    PIR+VKNLR+C DCHS +K +SK+YDREII+RD NRFH F+ G 
Sbjct: 540 EKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQ 599

Query: 838 CSCSDFW 844
           CSC DFW
Sbjct: 600 CSCGDFW 606



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/392 (33%), Positives = 197/392 (50%), Gaps = 25/392 (6%)

Query: 12  LATPTVTTLTNQHKAKTTPK----DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYI 67
              P +    N   A +TP     +   +  L+ C  L +L Q H HILK GL + P  +
Sbjct: 5   FTKPKLLRTINNVLASSTPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVL 64

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL---FMYNSLIRGYSCIGLGVE-AI 123
           +K         +  SL +A      ++   E    L   F++N+LIR Y+  G   + A+
Sbjct: 65  TK-------FASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL 117

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
           +LY  +    ILP+KFT+PFVL AC        G  VHG++VK GFD D+ V+N +++ Y
Sbjct: 118 ALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMY 177

Query: 184 GEC-GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
             C G I   R+VFDEM + + V+W+++I   AR     EAV LF EM    + P+ +TM
Sbjct: 178 SCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITM 237

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           V ++SAC  L  LELG  + AYI+   +     + NAL+DM+ KCG +  A +LF    +
Sbjct: 238 VSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNE 297

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-- 360
           + +V   +++      G  +EA  + +EM   G  PD V  +  +SA +  G +  GR  
Sbjct: 298 KTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREY 357

Query: 361 ---MCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
              M   Y L   +E +      M+DMY + G
Sbjct: 358 FGSMMKKYKLVPKIEHY----GCMVDMYCRTG 385


>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g40405
 gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/557 (40%), Positives = 350/557 (62%), Gaps = 2/557 (0%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP--RPDRVTMLSAV 347
           +D A Q+    +   L   N+++  + +  +  ++      +L  G   +PD  T+   V
Sbjct: 56  LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A   L     G   HG  +R G +    +   +I +Y + G  +   ++F+ +     V
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
              +++    + GDV  AR++F  MP RD I+WN M+ G  Q     EA+ +F +M  E 
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           +KV+ V M+ V SAC  LGALD  +W ++YIE+N I   ++LAT LVD++A+CGD ++AM
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           +VF  ME+++V  W++A+  +AM G GE+ +ELF+ M + G+ P+++ FV VL  CS  G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
            V++G   F SM +  G+ PQ+ HYGC+VDL  RAG L +A+ +I+ MP++P+  +W SL
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L A + ++N+++   A++++ EL+    G +VLLSNIYA +  W NV+ VR  MK +G+R
Sbjct: 416 LHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVR 475

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K PG S +EVNG+VHEF  GD+SHP+   I ++ ++++ RLR AGY  D T V+ D+DE+
Sbjct: 476 KQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEE 535

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+  L  HSEK A+AFG++S  + +PIR+VKNLR+C DCH  + ++SK+++REIIVRD 
Sbjct: 536 EKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDR 595

Query: 828 NRFHFFRQGSCSCSDFW 844
           NRFH F+ G CSC+ FW
Sbjct: 596 NRFHHFKDGHCSCNGFW 612



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 192/416 (46%), Gaps = 43/416 (10%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P+I  L +  T  E++Q H  +   G       +   V   A +   + L YA +     
Sbjct: 8   PAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVA-LSDHKYLDYANQ----- 61

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKS 151
           I D     TLF  NS+IR +    +  ++   Y  +  +G  + PD +T  F++ ACT  
Sbjct: 62  ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE-------------------------- 185
                G+QVHG  ++ GFD D  V+  LI+ Y E                          
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181

Query: 186 -----CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
                CGD+V  R++F+ M ER+ ++W ++I   A+    +EA+ +F  M  EG+K N V
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
            M+ V+SAC +L  L+ G    +YI+   +K    +   LVD+Y KCG ++ A ++F   
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           +++N+   ++ ++     G   + L +   M   G  P+ VT +S +   + +G +  G+
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361

Query: 361 MCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLI 413
             H   +RN  G+E        ++D+Y + G+ E A  I   M  K   + W+SL+
Sbjct: 362 R-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 178/407 (43%), Gaps = 66/407 (16%)

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAK 251
           ++ D   +  + +  S+I A  +  +P+++   +  ++  G  +KP++ T+  ++ AC  
Sbjct: 61  QILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTG 120

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYM-------------------------- 285
           L+  E G +V       G   +  +   L+ +Y                           
Sbjct: 121 LRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAM 180

Query: 286 -----KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                +CG V  A++LF    +R+ +  N ++S Y ++G +REAL +   M L G + + 
Sbjct: 181 VTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           V M+S +SA  QLG L  GR  H Y+ RN ++    +  T++D+Y KCG  E A  +F  
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  K V +W+S + GL  NG                                 E+ +ELF
Sbjct: 301 MEEKNVYTWSSALNGLAMNG-------------------------------FGEKCLELF 329

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
            +M  + +  + VT V V   C  +G +D  +  +  +    GI   ++    LVD++AR
Sbjct: 330 SLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYAR 389

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
            G  + A+ + ++M  K   + W++ + A  M  N E  V    +ML
Sbjct: 390 AGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKML 436


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/829 (33%), Positives = 430/829 (51%), Gaps = 75/829 (9%)

Query: 85  YAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
           YA + FD   +KD      +  YN L+  +S      EA+ L+ +L   G+  D  T   
Sbjct: 56  YAHQLFDETPLKD------ISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSC 109

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
            L  C        G QVH   +K GF  DV V   L++ Y +  D  DGR +FDEM  +N
Sbjct: 110 ALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKN 169

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSWTSL+   AR  L  E ++L  +M  EG+ PN  T   V+ A A    +E G +V A
Sbjct: 170 VVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHA 229

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            I + G +    + NAL+ MY+K   V  A+ +F     R+ V  N ++  Y  +G   E
Sbjct: 230 MIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLE 289

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI------ 377
              +   M L G +  R    +A+   +Q  +L   +  H  V++NG E    I      
Sbjct: 290 GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349

Query: 378 ----CNT----------------------MIDMYMKCGKQEMACRIFDHMSNKTV----V 407
               C++                      MI  +++    + A  +F  MS + V     
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHF 409

Query: 408 SWNSLIAG-------------------------------LIKNGDVESAREVFSEMPGRD 436
           ++++++AG                                +K G+V  +  VF  +P +D
Sbjct: 410 TYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA-LDLAKWIY 495
            ++W+ ML GL Q    E+AME+F  ++ E +K +  T   V +AC    A ++  K I+
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           A   K+G    + +++AL+ M+++ G+ + A +VF R E+RD+ +W + I      G+ +
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+E+F  M  QG+  D + F+GVLTAC+H GLV +G   F  M   + +  +  HY CM
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCM 649

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDL  RAG+  +A+D+I  MP   +  IW +LLAAC+ H+N+++   AAE++  L P  +
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
             +VLLSNI+A AG W   A VR  M E+ ++K  G S IE+  ++  F +GD SHP  +
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSD 769

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            + + L E++ +L+D GY PD   V  DV+E+ K+ +LS HSE+LA+A+GLI+     PI
Sbjct: 770 LVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPI 829

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++ KNLR+C DCH+  +L+S + +R +IVRD+NRFH F+ G CSC  +W
Sbjct: 830 QIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 202/391 (51%), Gaps = 31/391 (7%)

Query: 38  SLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           +LK C   + LN  KQ HC ++K G      Y        A M T+   +   +AF  + 
Sbjct: 312 ALKLCSQQRELNFTKQLHCGVVKNG------YEFAQDIRTALMVTYSKCSSVDEAFKLF- 364

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
              + +  +  + ++I G+       +A+ L+ +++  G+ P+ FT+  VL A   SS  
Sbjct: 365 SMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL-AGKPSSLL 423

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
               Q+H  I+K  +++   V   L++ Y + G++V+  RVF  +  +++V+W++++   
Sbjct: 424 S---QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGL 480

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQNLELGDRVCAYIDELGMKAN 273
           A+    ++A+ +F ++V+EG+KPN  T   VI+AC +    +E G ++ A   + G K+N
Sbjct: 481 AQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSG-KSN 539

Query: 274 ALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           AL V +AL+ MY K G +++A+++F   ++R++V  N++++ Y + G A++AL +   M 
Sbjct: 540 ALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQ 599

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMK 387
             G   D VT +  ++A    G +  G      M   Y +    E +    + M+D+Y +
Sbjct: 600 NQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHY----SCMVDLYSR 655

Query: 388 CGKQEMACRIFDHM---SNKTVVSWNSLIAG 415
            G  + A  I + M   ++ T+  W +L+A 
Sbjct: 656 AGMFDKAMDIINGMPFPASPTI--WRTLLAA 684


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/762 (33%), Positives = 403/762 (52%), Gaps = 36/762 (4%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A++ FD   + N  S     + +L++GY+  G   EA+ L+  L   G   + F   
Sbjct: 98  LATARRLFDGMPERNRVS-----FVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLT 152

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +L       A G    +H    K+G DR+ FV   LI+ Y  CG +   R VFD +  +
Sbjct: 153 TILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGK 212

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + V+WT+++   +  D+P+ A+  F +M   G KPN   +   + A   L +  LG  + 
Sbjct: 213 DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIH 272

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
               +        +  AL+DMY KCG ++ A  +F      +++L + ++S Y +     
Sbjct: 273 GCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNE 332

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +A  +   M+     P+  ++   + A A +  L  G   H   ++ G E    + N ++
Sbjct: 333 QAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALM 392

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY KC   E                 NSL              E+FS +   + +SWNT
Sbjct: 393 DMYAKCRNME-----------------NSL--------------EIFSSLQDANEVSWNT 421

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           ++ G  Q    E+A+ +F  M +  +   +VT   V  AC    ++  A  I++ IEK+ 
Sbjct: 422 IIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKST 481

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
            + D  +  +L+D +A+CG  + A++VF  + + DV +W + I A A+ G    A+ELF+
Sbjct: 482 FNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFD 541

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
            M +  IK + + FV +L+ C   GLVNQG  LF SM   H + P + HY C+V LLGRA
Sbjct: 542 RMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRA 601

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G L +AL  I  +P  P+ ++W +LL++C  H+NV +  YAAE++ +++P     +VLLS
Sbjct: 602 GRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLS 661

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           N+YA+AG    VA  R  M+  G++K  G S +E+ G+VH F+ G   HP+M  I++ML 
Sbjct: 662 NMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLE 721

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
            +N +    GYVPD+  VL DVDE+EK  +L  HSE+LA+A+GL  T    PIR++KNLR
Sbjct: 722 WLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLR 781

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            C DCH+  K++SK+  REIIVRD NRFH F +G CSC D+W
Sbjct: 782 SCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 246/556 (44%), Gaps = 42/556 (7%)

Query: 128 ELAGFGILP--DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG--FDRDVFVENCLINFY 183
           ELA    LP  D +     L  C        G  VH  +V+ G     D F  N L+NFY
Sbjct: 34  ELASLA-LPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFY 92

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            + G +   RR+FD M ERN VS+ +L+   A R   +EA+ LF  +  EG + N   + 
Sbjct: 93  AKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLT 152

Query: 244 CVISACAKLQ--NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
            ++     +    L  G   CA   +LG   NA +  AL+D Y  CGAV  A+ +F    
Sbjct: 153 TILKVLVTMDAPGLACGIHACAC--KLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIV 210

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
            ++ V    ++S Y    +   AL    +M + G +P+   + SA+ A+  L   L G+ 
Sbjct: 211 GKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKG 270

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            HG  ++   +    +   ++DMY KCG  E A  IF+ + +  V+ W+ LI+       
Sbjct: 271 IHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLIS------- 323

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
                                      Q    E+A E+F  M+   +  +  ++ GV  A
Sbjct: 324 ------------------------RYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQA 359

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  +  L+L + I+    K G   ++ +  AL+DM+A+C + + ++++F  ++  +  +W
Sbjct: 360 CANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSW 419

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
              I      G  E A+ +F+EM    +    + F  VL AC++   +     +  S+ +
Sbjct: 420 NTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQI-HSLIE 478

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
               +   +    ++D   + G + +AL + +S+ VE + V W S+++A   H     A 
Sbjct: 479 KSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALHGRATNAL 537

Query: 662 YAAERITELDPEKSGV 677
              +R+ + D + + V
Sbjct: 538 ELFDRMNKSDIKANDV 553


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 403/748 (53%), Gaps = 39/748 (5%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           ++N++I        G EA+ L+ ++   G+ P+K T    LNAC  S  F E +++H   
Sbjct: 207 VWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFA 266

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            ++  D D  V+  L+N YG+ G + D   +F+ + ER+VVSW +++ A A      +A 
Sbjct: 267 RELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAF 326

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM---KANALMVNALV 281
             F EM+  G  P+ +T V +++AC    +L+ GD V     E G      + +M  A++
Sbjct: 327 KCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIM 386

Query: 282 DMYMKCGAVDTA---KQLFGECKDR-NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           +MY +C +  +A     L  + +D+ ++++ NT++S YV      EA  I   MLL G  
Sbjct: 387 NMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVT 446

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            D V++++  +A      L  G+  H  +  + L     + N ++ MY + G        
Sbjct: 447 IDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGS------- 499

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                   +E ARE+F  M  R+ ISW  M+G  +Q  +  EA+
Sbjct: 500 ------------------------LEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREAL 535

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            +FR +L E +  + VT   V +ACG L ++  AK + A + + G   ++++A  L+   
Sbjct: 536 RIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTL 595

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            +CG  +     F+ M  ++  +W  AI A A  GNG + VELF  M  +GI   S+  +
Sbjct: 596 GKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLI 655

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           GVL++CSH GLV QG+  F +M   +G   +  HY C++DLL RAG L  A + +K +P 
Sbjct: 656 GVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPF 715

Query: 638 EPNDVI-WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
               V  W +LL  C+ H +++    A +RI  L+P  +G ++++ N+YA AGKW   A 
Sbjct: 716 GDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAA 775

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR  M E G +K PG S IEV G++HEF  GD SHP  + I   L  +N  ++ AG+V D
Sbjct: 776 VRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCD 835

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           +  V+ D+  +EK+ LL  HSEKLA+AFGLIST+   P+R++KNLR+C DCHS  K +S 
Sbjct: 836 IKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISG 895

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  REI+VRD  RFH FR G+CSC DFW
Sbjct: 896 LVGREIVVRDAYRFHHFRGGACSCEDFW 923



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 176/666 (26%), Positives = 306/666 (45%), Gaps = 61/666 (9%)

Query: 5   LNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQP---HCHILKQGLG 61
           ++P     + P   T   ++    +   S     +  C  L++L Q    H  IL+ G+ 
Sbjct: 13  IDPVSFSTSAPQHRTDELKYFDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIE 72

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
                 ++++    + G+ E      +A    I+D    A    + SLI   +  G   E
Sbjct: 73  VGDFLGARLLAMYCKCGSPEE----ARAVFQGIQDKSVVA----WTSLIGVNARSGHPKE 124

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACT---KSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
           A  L+ E+   G++P+  T+  VL AC    +       V+  G++     + DV V   
Sbjct: 125 AFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRARVEACGSL-----ELDVIVATA 179

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           ++N YG+CGD+     VFD +  R+   W ++I      +   EA+ LF +M   G+ PN
Sbjct: 180 VMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPN 239

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
             T V  ++AC   ++     R+ A+  EL   A+ ++  ALV+MY K G VD A+++F 
Sbjct: 240 KGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFE 299

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
             ++R++V  N +++     G   +A     EMLL G  P R+T ++ ++A       L 
Sbjct: 300 RIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNAC-----FLA 354

Query: 359 GRMCHGYVLRN-------GLEGWDSICNTMI-DMYMKCGKQEMACRIFDHMSNKTVVSWN 410
             + HG  ++        G+E  D +  T I +MY +C             S K+  S +
Sbjct: 355 AHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRC------------KSPKSAFSSS 402

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
            L+         E  R+  S M       WNT+L    +   FEEA  +FR+ML   + +
Sbjct: 403 LLL---------EQDRDQPSIM------MWNTVLSLYVENEQFEEAFTIFRLMLLGGVTI 447

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           D V+++ V +ACG   +L+  KWI++ + ++ +     +  ALV M+AR G  + A ++F
Sbjct: 448 DTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIF 507

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
             M  R+V +WTA +G  +  G   +A+ +F  +L +G+ P+ + F  VL AC +   + 
Sbjct: 508 DAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIP 567

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
               L ++     G    +     ++  LG+ G L E  +  + M V+ N V W + +AA
Sbjct: 568 AA-KLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVK-NQVSWNTAIAA 625

Query: 651 CQKHQN 656
             +H N
Sbjct: 626 NAQHGN 631



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 165/362 (45%), Gaps = 11/362 (3%)

Query: 70  VVCTCAQMGTFESLTYAQKAFD--YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
           VV   A M  +      + AF     ++ +    ++ M+N+++  Y       EA +++ 
Sbjct: 379 VVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFR 438

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +   G+  D  +   V NAC  S++  +G  +H  + +    R   V+N L+  Y   G
Sbjct: 439 LMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLG 498

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            + D R +FD M+ RNV+SWT+++   ++  L +EA+ +F  ++ EG+ PN VT   V++
Sbjct: 499 SLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLN 558

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC  L ++     V A + E G   N  + N L+    KCG+++     F     +N V 
Sbjct: 559 ACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVS 618

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            NT ++   + G     + +   M L G     VT++  +S+ +  G +  G   + Y L
Sbjct: 619 WNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQG---YSYFL 675

Query: 368 R----NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM--SNKTVVSWNSLIAGLIKNGD 421
                 G        + +ID+  + G  E A      +   +++V  W +L+ G   +GD
Sbjct: 676 NMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGD 735

Query: 422 VE 423
           +E
Sbjct: 736 LE 737



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 8/207 (3%)

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           D  T   +   C  L  L   + I+  I +NGI     L   L+ M+ +CG P+ A  VF
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           + ++ + V AWT+ IG  A  G+ ++A  LF EM  QG+ P+ + +V VL AC H   V+
Sbjct: 99  QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158

Query: 591 QGWHLFRSMTDIHG-VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
                 R+  +  G +   ++    +++  G+ G L  A  +   + V  +  +W ++++
Sbjct: 159 T----IRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVR-DAAVWNAMIS 213

Query: 650 ACQKHQNVDIA--AYAAERITELDPEK 674
               H+  D A   +   R+  + P K
Sbjct: 214 LLVAHEQGDEALELFRQMRLGGVTPNK 240


>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/598 (41%), Positives = 350/598 (58%), Gaps = 40/598 (6%)

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           +T   VI AC +      G  V  ++ + G + ++ +VN+L+ +Y     +  AKQLF  
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
           C DR++V  N ++  YV+ G       + D M+                           
Sbjct: 61  CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMV--------------------------- 93

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
             C   +       W    NT+I+ Y   GK + A R+FD M  + +VSWNS+++G +K 
Sbjct: 94  --CRDVI------SW----NTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKC 141

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G+VE A  +FSEMP RD +SWN+ML    Q     EA+ LF  M +  +K    T+V + 
Sbjct: 142 GNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 201

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           SAC +LGALD    ++ YI  N I  +  + TALVDM+A+CG    A QVF  ME +DV 
Sbjct: 202 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 261

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
           AW   I  MA+ G+ ++A +LF EM    ++P+ I FV +L+ACSH G+V++G  L   M
Sbjct: 262 AWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 321

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
           +  +G+ P++ HY C++DLL RAGLL EA++LI +MP+EPN    G+LL  C+ H N ++
Sbjct: 322 SSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFEL 381

Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
                +R+  L P  SG ++LLSNIYA+A KW +  +VR  MK  GI K+PG S IE+ G
Sbjct: 382 GEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKG 441

Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDA-GYVPDLTNVLLDVDEQEKKYLLSHHSE 778
            VH F +GD SHPE N I   L E++ RL+ A GY  D  NVLLD++E++K++ L+ HSE
Sbjct: 442 MVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSE 501

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           KLA+A+GL+       IR+VKNLR+C DCH   KL+SKVY REIIVRD NRFH F  G
Sbjct: 502 KLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDG 559



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 216/419 (51%), Gaps = 41/419 (9%)

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
            T+PFV+ AC +SS    G+ VH  +VK GF+ D ++ N LI+ Y    D+   +++F  
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
            S+R+VVSW ++I    +R        +F  MV   +    ++   +I+  A +  ++  
Sbjct: 61  CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV----ISWNTIINGYAIVGKIDEA 116

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            R+    DE+  + N +  N+++  ++KCG V+ A  LF E   R++V  N++++ Y + 
Sbjct: 117 KRL---FDEMPER-NLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQC 172

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G   EALA+ D+M   G +P   T++S +SA A LG L  G   H Y+  N +E    + 
Sbjct: 173 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 232

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
             ++DMY KCGK  +A ++F+ M +K V++WN++IAG+  +G V+ A+++F EM      
Sbjct: 233 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEM------ 286

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                          +EA           ++ + +T V + SAC + G +D  + +   +
Sbjct: 287 ---------------KEA----------SVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 321

Query: 499 EKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
             + GI   ++    ++D+ AR G  + AM++   M  + + SA  A +G   + GN E
Sbjct: 322 SSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 380



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 102/194 (52%), Gaps = 1/194 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS++  Y+  G   EA++L+ ++   G+ P + T   +L+AC    A  +G+ +H  I 
Sbjct: 162 WNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIN 221

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
               + +  V   L++ Y +CG I    +VF+ M  ++V++W ++I   A     KEA  
Sbjct: 222 DNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQ 281

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMY 284
           LF EM E  ++PN +T V ++SAC+    ++ G ++   +    G++      + ++D+ 
Sbjct: 282 LFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLL 341

Query: 285 MKCGAVDTAKQLFG 298
            + G ++ A +L G
Sbjct: 342 ARAGLLEEAMELIG 355


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/670 (37%), Positives = 381/670 (56%), Gaps = 37/670 (5%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA-CARRDLPKEAVYLFFE-MVEEGIK 236
           +++ Y + G+I   R+ FDEM   ++VSW +LI A    RD  +   +LFF  M+ +GI 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDR--CWLFFRGMLLQGIN 58

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P  V +   +SAC   + + +G  +   I   G++  +++  ALV MY K G    A  +
Sbjct: 59  PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASV 118

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F     R++V  + +++ Y R G  REAL +  +M L G  P++VT++S + A A LGDL
Sbjct: 119 FLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL 178

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G + H  V   G++    +   ++++Y KCG+ E A   F  +  K VV+W+++ A  
Sbjct: 179 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAY 238

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            +N     A  V   M           L GL   +                      T V
Sbjct: 239 ARNDRNRDAIRVLHRMD----------LEGLVPNS---------------------TTFV 267

Query: 477 GVASACGYLGALDLAKWIYAYIE--KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
            V  AC  + AL   + I+   +    G+  D+ + TALV+M+++CG+   A  +F ++ 
Sbjct: 268 SVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIA 327

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
             D+  W + I   A  G  E+A+ELF  M  +G++P  I F  VL ACSH G+++QG  
Sbjct: 328 HLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRK 387

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F S    HG+ P+  H+GCMVDLLGRAG + ++ DL+  MP EP+ V W + L AC+ +
Sbjct: 388 HFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTY 447

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +N+D A +AAE + +LDP K   +VLLSN+YA AG+W++VAR+R  M+     K  G S 
Sbjct: 448 RNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSW 507

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           IEV  +VHEF SGD  HP +  I + L+ +   +++AGYVPD   VL DV ++ K+ ++ 
Sbjct: 508 IEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVG 567

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEKLAMAF L++T +  PIRVVKNLR+C DCH+ +K +SK+ +REI+VRD NRFH F+
Sbjct: 568 YHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQ 627

Query: 835 QGSCSCSDFW 844
            G+CSC D+W
Sbjct: 628 NGACSCGDYW 637



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 212/431 (49%), Gaps = 37/431 (8%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI P +      L+ACT +     G  +  AI+  G + +  V+  L++ YG+ G   D 
Sbjct: 56  GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDA 115

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             VF  MS R+VV+W++++ A AR   P+EA+ LF +M  +G+ PN VT+V  + ACA L
Sbjct: 116 ASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 175

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            +L  G  +   ++  G+++  ++  ALV++Y KCG ++ A + FG+  ++N+V  + I 
Sbjct: 176 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAIS 235

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH--GYVLRNG 370
           + Y R    R+A+ +L  M L G  P+  T +S + A A +  L  GR  H    VL  G
Sbjct: 236 AAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGG 295

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           LE    +   +++MY KCG   +A  +FD +++  +V WNSLIA   ++G  E       
Sbjct: 296 LESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTE------- 348

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                                   +A+ELF  M  E ++   +T   V  AC + G LD 
Sbjct: 349 ------------------------KALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQ 384

Query: 491 A-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM--EKRDVSAWTAAIGA 547
             K   ++I  +GI  + +    +VD+  R G    +  +   M  E   V AW A +GA
Sbjct: 385 GRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPV-AWMAFLGA 443

Query: 548 MAMEGNGEQAV 558
                N ++A+
Sbjct: 444 CRTYRNMDRAI 454



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 2/257 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +++++  Y+  G   EA+ L+ ++   G+ P+K T    L+AC        G  +H  + 
Sbjct: 130 WSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVE 189

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             G    V V   L+N YG+CG I      F ++ E+NVV+W+++  A AR D  ++A+ 
Sbjct: 190 AQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIR 249

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL--GMKANALMVNALVDM 283
           +   M  EG+ PNS T V V+ ACA +  L+ G R+      L  G++++  ++ ALV+M
Sbjct: 250 VLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNM 309

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG +  A  +F +    +LVL N++++   + G   +AL + + M L G +P  +T 
Sbjct: 310 YSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITF 369

Query: 344 LSAVSASAQLGDLLCGR 360
            S + A +  G L  GR
Sbjct: 370 TSVLFACSHAGMLDQGR 386



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 21/196 (10%)

Query: 29  TPKDSPSIGSLKNCKTLNELKQ-----PHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
            P  +  +  L  C  +  LKQ         +L  GL      ++ +V   ++ G   +L
Sbjct: 260 VPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCG---NL 316

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
             A   FD           L ++NSLI   +  G   +A+ L+  +   G+ P   TF  
Sbjct: 317 ALAGDMFDKI-----AHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTS 371

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE----NCLINFYGECGDIVDGRRVFDEM 199
           VL AC+ +    +G +     V    D  +F E     C+++  G  G IVD   +   M
Sbjct: 372 VLFACSHAGMLDQGRK---HFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHM 428

Query: 200 S-ERNVVSWTSLICAC 214
             E + V+W + + AC
Sbjct: 429 PFEPHPVAWMAFLGAC 444


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/713 (34%), Positives = 381/713 (53%), Gaps = 35/713 (4%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI  +  ++ ++   C    A  +G   H  + +M  + + F++NC++  Y +C      
Sbjct: 87  GISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILKMYCDCKSFTSA 145

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            R FD++ ++++ SW+++I A        EAV LF  M++ GI PNS     +I +    
Sbjct: 146 ERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDP 205

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             L+LG ++ + +  +G  AN  +   + +MY+KCG +D A+    +   +N V C  +M
Sbjct: 206 SMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLM 265

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
             Y +    R+AL +  +M+  G   D       + A A LGDL  G+  H Y ++ GLE
Sbjct: 266 VGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLE 325

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
              S+   ++D Y+KC +                                E+AR+ F  +
Sbjct: 326 SEVSVGTPLVDFYVKCAR-------------------------------FEAARQAFESI 354

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
              +  SW+ ++ G  Q   F+ A+E+F+ + S+ + ++      +  AC  +  L    
Sbjct: 355 HEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGA 414

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I+A   K G+   +   +A++ M+++CG    A Q F  ++K D  AWTA I A A  G
Sbjct: 415 QIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHG 474

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
              +A+ LF EM   G++P+++ F+G+L ACSH GLV +G  +  SM+D +GV+P I HY
Sbjct: 475 KAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHY 534

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CM+D+  RAGLL EAL++I+S+P EP+ + W SLL  C  H+N++I   AA+ I  LDP
Sbjct: 535 NCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDP 594

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
             S  +V++ N+YA AGKW   A+ R  M E+ +RK    S I V GKVH F  GD  HP
Sbjct: 595 LDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHP 654

Query: 733 EMNNISSMLREMNCRLRDAG-YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
           +   I S L+E+N   + +   + +  N L D  E++++ L   HSE+LA+A+GLI T+ 
Sbjct: 655 QTEQIYSKLKELNFSFKKSKERLLNEENALCDFTERKEQLL--DHSERLAIAYGLICTAA 712

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             PI V KN R C DCH FAK VS V  RE++VRD NRFH    G CSC D+W
Sbjct: 713 DTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 226/483 (46%), Gaps = 44/483 (9%)

Query: 67  ISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLY 126
           I K+ C C      +S T A++ FD  +  + +S     ++++I  Y+  G   EA+ L+
Sbjct: 132 ILKMYCDC------KSFTSAERFFDKIVDQDLSS-----WSTIISAYTEEGRIDEAVRLF 180

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
           + +   GI P+   F  ++ + T  S    G Q+H  ++++GF  ++ +E  + N Y +C
Sbjct: 181 LRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKC 240

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G +       ++M+ +N V+ T L+    +    ++A+ LF +M+ EG++ +      ++
Sbjct: 241 GWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIIL 300

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            ACA L +L  G ++ +Y  +LG+++   +   LVD Y+KC   + A+Q F    + N  
Sbjct: 301 KACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDF 360

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
             + +++ Y + G    AL +   +   G   +     +   A + + DL+CG   H   
Sbjct: 361 SWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADA 420

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           ++ GL  + S  + MI MY KCG+ + A + F  +     V+W ++I     +G    A 
Sbjct: 421 IKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEAL 480

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
            +F EM G                                 ++ + VT +G+ +AC + G
Sbjct: 481 RLFKEMQGSG-------------------------------VRPNAVTFIGLLNACSHSG 509

Query: 487 ALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAA 544
            +   K I  +  ++ G++  +     ++D+++R G  Q A++V R +  + DV +W + 
Sbjct: 510 LVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSL 569

Query: 545 IGA 547
           +G 
Sbjct: 570 LGG 572



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 1/162 (0%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N  L  L ++    E  E  R M    I ++  +   +   CG LGAL   K  +  +++
Sbjct: 61  NLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQR 120

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
              + +  +   ++ M+  C     A + F ++  +D+S+W+  I A   EG  ++AV L
Sbjct: 121 MA-NSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRL 179

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           F  ML  GI P+S +F  ++ + +   +++ G  +   +  I
Sbjct: 180 FLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRI 221


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/664 (36%), Positives = 375/664 (56%), Gaps = 55/664 (8%)

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           ++W  +I   A   L + ++  F  +   GI P+      ++ A    ++  L   + A 
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 265 IDELGMKANALMVNALVDMYMKCGA----------------------VDTAKQLFGECKD 302
           +  LG   +    NAL++MY K                         +D+ ++LF     
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R++V  NT+++   + G+  EAL ++ EM     RPD  T+ S +    +  ++  G+  
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           HGY +R+G +    I +++IDMY KC + E++   F  +SN                   
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSN------------------- 262

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                       RD ISWN+++ G  Q   F++ +  FR ML E++K  +V+   V  AC
Sbjct: 263 ------------RDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPAC 310

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME--KRDVSA 540
            +L AL+L K ++AYI + G   +  +A++L+DM+A+CG+ + A  +F ++E   RD+ +
Sbjct: 311 AHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVS 370

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           WTA I   AM G+   AV LF EML  G+KP  + F+ VLTACSH GLV++GW  F SM 
Sbjct: 371 WTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQ 430

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
              GV+P + HY  + DLLGRAG L EA D I +M  EP   +W +LLAAC+ H+N+++A
Sbjct: 431 RDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELA 490

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
                +I  +DP   G HV++SNIY++A +W + A++R++M++ G++K P  S IEV  K
Sbjct: 491 EKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNK 550

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           VH F +GD+SHP  + I+  L  +  ++   GYV D   VL DVDE+ K+ LL  HSE+L
Sbjct: 551 VHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERL 610

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+AFG+IST+    IRV+KN+R+C DCH+  K ++K+  REIIVRDN+RFH F+ GSCSC
Sbjct: 611 AIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSC 670

Query: 841 SDFW 844
            D+W
Sbjct: 671 GDYW 674



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 227/498 (45%), Gaps = 57/498 (11%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           +K  + +     +  +I+ Y+  GL   +++ +  L  FGI PD+  FP +L A T    
Sbjct: 32  VKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKH 91

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG----------------------DIVD 191
           F     +H A++++GF  D++  N L+N Y +                         I  
Sbjct: 92  FNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDS 151

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R++FD M  R+VVSW ++I   A+  + +EA+ +  EM +E ++P+S T+  ++    +
Sbjct: 152 VRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTE 211

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
             N+  G  +  Y    G   +  + ++L+DMY KC  V+ +   F    +R+ +  N+I
Sbjct: 212 HANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSI 271

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           ++  V+ G   + L     ML    +P +V+  S + A A L  L  G+  H Y++R G 
Sbjct: 272 IAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGF 331

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFD--HMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           +    I ++++DMY KCG  +MA  IF+   M ++ +VSW ++I G   +G         
Sbjct: 332 DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHA------- 384

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                    +A+ LF  ML + +K   V  + V +AC + G +D
Sbjct: 385 ------------------------LDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVD 420

Query: 490 LAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGA 547
                +  ++++ G+   ++   A+ D+  R G  + A      M E+   S W+  + A
Sbjct: 421 EGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAA 480

Query: 548 MAMEGNGEQAVELFNEML 565
                N E A ++ N++L
Sbjct: 481 CRAHKNIELAEKVVNKIL 498


>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/468 (47%), Positives = 310/468 (66%)

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +CN M+  Y+   +   A ++FD M  + +VSWN++I G    G+V  ARE+F     RD
Sbjct: 25  LCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRD 84

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
             SW++M+    +    +EA+EL+R M +  I  D +T+V V SAC  LGAL +   ++ 
Sbjct: 85  AFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHR 144

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           ++E N I  D++L TAL+DM+A+CGD + A +VF RM ++DV  W++ I  +A  G G +
Sbjct: 145 FVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHE 204

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           ++ LF++M+ +G+KP+ + FVGVL AC+H GLV++G   FRSM ++HG+ P + HYGCMV
Sbjct: 205 SLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMV 264

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
           DLLGR+G + EA  LI+SM  EP+ +IW +LL AC+ H+NV+IA  A  ++  LDP   G
Sbjct: 265 DLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDG 324

Query: 677 VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
            +VLLSNIYA A  W  VA +R  ++   I+++PG SSIE + K+HEF SGD  HP    
Sbjct: 325 HYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKE 384

Query: 737 ISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIR 796
           I  +L EM  RL+ AGY P    VL D+DEQ K+  L+ HSEKLA+AF L++T     IR
Sbjct: 385 IYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIR 444

Query: 797 VVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + KNLR C DCHS  KL+S VYDR++IVRD NRFH F +G CSC D+W
Sbjct: 445 ITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 1/205 (0%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D       F ++S+I  Y+      EA+ L+ E+    I+PD  T   V++AC+   A
Sbjct: 76  IFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGA 135

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G +VH  +     + D+ +   LI+ Y +CGDI   +RVFD M E++V +W+S+I  
Sbjct: 136 LAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIG 195

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKA 272
            A   L  E++ LF +M+ EG+KPN VT V V+ AC  +  +  G +    ++E+ G++ 
Sbjct: 196 LANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEP 255

Query: 273 NALMVNALVDMYMKCGAVDTAKQLF 297
                  +VD+  + G V+ A+QL 
Sbjct: 256 TVEHYGCMVDLLGRSGHVEEARQLI 280



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 151/300 (50%), Gaps = 6/300 (2%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           L D F    +L A    S   E  +V   +      RD+   N +I+ Y   G++   R 
Sbjct: 20  LRDVFLCNVMLAAYVSRSEVAEARKVFDGMPM----RDLVSWNTMIHGYAMRGEVGLARE 75

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +FD   +R+  SW+S+I A A+    KEA+ L+ EM    I P+ +T+V V+SAC+ L  
Sbjct: 76  IFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGA 135

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L +G  V  +++   ++ +  +  AL+DMY KCG +++A+++F    ++++   ++++  
Sbjct: 136 LAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIG 195

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR-NGLEG 373
               GL  E+L++  +M+  G +P+ VT +  + A   +G +  G+     +   +G+E 
Sbjct: 196 LANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEP 255

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
                  M+D+  + G  E A ++   M+     + W +L+     + +VE A E  +++
Sbjct: 256 TVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKL 315



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 140/341 (41%), Gaps = 95/341 (27%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV-------------------------- 316
           MY K G VD A+  F E   R++ LCN +++ YV                          
Sbjct: 1   MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTM 60

Query: 317 --------RLGLAR----------------------------EALAILDEMLLHGPRPDR 340
                    +GLAR                            EAL +  EM      PD 
Sbjct: 61  IHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDC 120

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           +T++S VSA + LG L  G   H +V  N +E    +   +IDMY KCG  E A R+FD 
Sbjct: 121 ITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDR 180

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  K V +W+S+I GL  +G                       LG         E++ LF
Sbjct: 181 MPEKDVQTWSSMIIGLANHG-----------------------LG--------HESLSLF 209

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
             M+SE +K + VT VGV  AC ++G + +  K+  +  E +GI   ++    +VD+  R
Sbjct: 210 SKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGR 269

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVE 559
            G  + A Q+ R M  + D   W A +GA  +  N E A E
Sbjct: 270 SGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEE 310


>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
 gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
          Length = 668

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/588 (39%), Positives = 354/588 (60%), Gaps = 3/588 (0%)

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSL 210
           +F +  Q+   ++  G   D F  + LI+F    E  ++    ++ + +   NV SW ++
Sbjct: 65  SFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAV 124

Query: 211 ICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           I  C   + P++ + L+  M+   G +P++ T   +   CA L    +G  +   + ++G
Sbjct: 125 IRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMG 184

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
              +  + N ++ M +  G    A ++F E   R+LV  N++++ YVR    REA+ I  
Sbjct: 185 FDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQ 244

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           +M+    +PD VTM+  VSA AQL  L  GR  H Y+  +GL    S+ N ++DMY+KCG
Sbjct: 245 QMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCG 304

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             E    +FD+M  KTVVSW ++I G  KNG ++ A ++F +MP ++ ++WN M+G   Q
Sbjct: 305 DLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQ 364

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
            N+  EA+ELFR M    +K D+VTM+   SAC  LGALD   W + YI+K+ +  D+ L
Sbjct: 365 ANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVAL 424

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
            TAL+DM+A+CG+  +A+QVF  M +R+   WTA IG +A+ GN   A+  F++M+  G+
Sbjct: 425 GTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGL 484

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
            PD I F+GVLTAC HGGLV +G   F  M     +SPQ  HY CMV+LLGRAGLL EA 
Sbjct: 485 MPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAE 544

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           +LIK+MP+E + ++WG+L  AC  H+N+ I   AA ++ +LDP  SG++VLL+N+Y  AG
Sbjct: 545 ELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAG 604

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           KW     +R  M E+G+ K PGSSSIEVNG ++EF   D+SHP+   I
Sbjct: 605 KWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQI 652



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/576 (27%), Positives = 278/576 (48%), Gaps = 78/576 (13%)

Query: 21  TNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           T+ +   T    +P +  L+NCK+ ++LKQ    ++  GL       S+++  CA     
Sbjct: 42  TSWNTTHTYVLSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCA----- 96

Query: 81  ESLTYAQKAFDYYIK--DNETSATLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPD 137
                  +  DY IK  +N  +  +F +N++IRG        + + LY   L   G  PD
Sbjct: 97  ---ISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPD 153

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
            +T+ F+   C        G ++ G ++KMGFD+D+++ N +I+     G+     +VFD
Sbjct: 154 NYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFD 213

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
           E   R++VSW SLI    RR  P+EA+ ++ +M+ E +KP+ VTM+ V+SACA+L++L+L
Sbjct: 214 EGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKL 273

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKC------------------------------ 287
           G  +  YI+E G+     +VNAL+DMY+KC                              
Sbjct: 274 GREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAK 333

Query: 288 -GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
            G +D A +LF +  ++N+V  N ++ + V+  L+ EAL +  EM     +PD+VTML  
Sbjct: 334 NGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHC 393

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           +SA +QLG L  G   H Y+ ++ L    ++   +IDMY KCG    A ++F+ M  +  
Sbjct: 394 LSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNS 453

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           ++W ++I GL   G+V  A   FS+                               M+  
Sbjct: 454 LTWTAIIGGLALYGNVNDAIFYFSK-------------------------------MIDS 482

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQR 525
            +  D +T +GV +AC + G ++  +  +  ++ +  +    +  + +V++  R G  + 
Sbjct: 483 GLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEE 542

Query: 526 AMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQA 557
           A ++ + M  + D   W A   A  +  N   GE+A
Sbjct: 543 AEELIKTMPMEADAMVWGALFFACGIHRNLLIGERA 578


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 354/591 (59%), Gaps = 6/591 (1%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL--FGECKDRNLVLCNTIMSNYVR 317
           +V A+I   G+   + ++  L+ M  K      +  L  FG+    N  L   ++  Y  
Sbjct: 60  QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYAL 119

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY-VLRNGLEGWDS 376
            GL  E+      M   G  P   T  +   A     ++  G+  H   +L  G      
Sbjct: 120 QGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLY 179

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + N+MID+Y+KCG    A ++FD MS + VVSW  LI    K GD+ESA  +F ++P +D
Sbjct: 180 VGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKD 239

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            ++W  M+ G  Q    +EA+E F+ M    ++ D VT+ GV SAC  LGA+  A WI  
Sbjct: 240 MVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRD 299

Query: 497 YIEKNGI--HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
             E++G     ++ + +AL+DM+++CG P  A +VF  M++R+V ++++ I   AM G  
Sbjct: 300 IAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 359

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
             A++LF++ML+  I+P+ + F+G+L+ACSH GLV QG  LF  M    GV+P   HY C
Sbjct: 360 HSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC 419

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           MVDLLGRAG L EALDL+K+MP+EPN  +WG+LL AC+ H N DIA  AA  + +L+P  
Sbjct: 420 MVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNG 479

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE-VNGKVHEFTSGDESHPE 733
            G ++LLSNIYASAG+W  V+++R  ++E+G +K PG S  E  NG++H+F +GD +HP 
Sbjct: 480 IGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPR 539

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
            + I   L+++  RLR  GY P+L +   D+ + EK+ +L  HSEKLA+A+GL+ T    
Sbjct: 540 SSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGD 599

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            I+++KN+R+C DCH+     S++  REIIVRDN RFH F  G+CSC +FW
Sbjct: 600 TIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 195/396 (49%), Gaps = 55/396 (13%)

Query: 3   LTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGH 62
           L    SP  +  P +     QH+ K       SI  L +C   +++KQ H HI++ GL  
Sbjct: 20  LQTRGSPNFIPFPQL-----QHQRKLLEWRLMSI--LHDCTLFSQIKQVHAHIIRNGLSQ 72

Query: 63  KPSYISKVVCTCAQ----MGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGL 118
               ++K++    +    MG++  L + Q  +             F++ ++IRGY+  GL
Sbjct: 73  CSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY----------PNPFLWTAMIRGYALQGL 122

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG-FDRDVFVEN 177
             E+ + Y  +   G+ P  FTF  +  AC  +     G QVH   + +G F  D++V N
Sbjct: 123 LSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGN 182

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR----------------RDL-- 219
            +I+ Y +CG +   R+VFDEMSER+VVSWT LI A A+                +D+  
Sbjct: 183 SMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVA 242

Query: 220 -------------PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD--RVCAY 264
                        PKEA+  F +M + G++ + VT+  VISACA+L  ++  +  R  A 
Sbjct: 243 WTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAE 302

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
               G   N ++ +AL+DMY KCG+ D A ++F   K+RN+   ++++  Y   G A  A
Sbjct: 303 RSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSA 362

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           L +  +ML    RP++VT +  +SA +  G +  GR
Sbjct: 363 LQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR 398



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 105/204 (51%), Gaps = 3/204 (1%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D+  S  +  + +++ GY+  G   EA+  + ++   G+  D+ T   V++AC +  A  
Sbjct: 233 DDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK 292

Query: 156 EGVQVHGAIVKMGF--DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
               +     + GF    +V V + LI+ Y +CG   +  +VF+ M ERNV S++S+I  
Sbjct: 293 HANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILG 352

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKA 272
            A       A+ LF +M++  I+PN VT + ++SAC+    +E G ++ A +++  G+  
Sbjct: 353 YAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAP 412

Query: 273 NALMVNALVDMYMKCGAVDTAKQL 296
           +      +VD+  + G ++ A  L
Sbjct: 413 SPDHYACMVDLLGRAGCLEEALDL 436


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/636 (38%), Positives = 371/636 (58%), Gaps = 46/636 (7%)

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           I+   KL    L D+   +   +G+K        L+ +Y  CG    A+ +F E  D+N+
Sbjct: 34  INTLKKLHGKVLNDQYLRWNPSVGIK--------LMRVYAACGEPGLARHIFDEITDKNV 85

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  N ++ +YV   L ++AL +   M   G  PD  T    + AS++   L  G   HG 
Sbjct: 86  VFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGA 145

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           VL+ GL+    + N +I MY KC   + A ++ D +  + VVSWNS+++   +NG    A
Sbjct: 146 VLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDA 205

Query: 426 -------------------------------------REVFSEMPGRDHISWNTMLGGLT 448
                                                +E+F ++  +  ISWN M+    
Sbjct: 206 LELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYV 265

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
             +M +EA+ L+  M +  ++ D V++V V  A G L AL L + ++ + E+  +  ++ 
Sbjct: 266 NNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLL 325

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           L  AL+DM+A+CG  + A  VF +M+ RDV +WT+ I A    G G  AV +F EM   G
Sbjct: 326 LENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSG 385

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           + PDSI FV VL ACSH GL++ G + F  M +  G++P++ H+ C+VDLLGRAG + EA
Sbjct: 386 LNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC-GITPKLEHFACVVDLLGRAGKIDEA 444

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
              I+ MP+EP++ +WG LL+AC+ + N++I   AA+++  L+PE SG +VLLSNIYA A
Sbjct: 445 YGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKA 504

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
           G+W +VA +R  M+ +GI+KLPG S++E+N  VH F +GD SHP+   I   L  +  ++
Sbjct: 505 GRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKM 564

Query: 749 RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
           ++ GY+P+  + L DV+E++K+Y L+ HSEKLA+AF +I+T    PIRV KNLR+C DCH
Sbjct: 565 KELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCH 624

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             AKL+SK+ +REII+RD +RFH F++G CSC D+W
Sbjct: 625 VAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 226/511 (44%), Gaps = 74/511 (14%)

Query: 45  LNELKQPHCHILK-QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +N LK+ H  +L  Q L   PS   K++   A  G        +     +I D  T   +
Sbjct: 34  INTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACG--------EPGLARHIFDEITDKNV 85

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
             +N +IR Y    L  +A+ +Y  +   G +PD +T+P VL A ++S +   G+Q+HGA
Sbjct: 86  VFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGA 145

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K+G D +++V N LI  YG+C  + + ++V DE+  R+VVSW S++   A+     +A
Sbjct: 146 VLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDA 205

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + L  EM    +KPN  TM  ++ A     +                  N L V      
Sbjct: 206 LELCREMEALNLKPNDCTMASLLPAVTNTTS-----------------DNVLYV------ 242

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
                     K++F +   ++++  N +++ YV   + +EA+ +  +M  +G  PD V++
Sbjct: 243 ----------KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSI 292

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S + A   L  L  GR  H +  R  L     + N +IDMY KCG    A  +F+ M  
Sbjct: 293 VSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQF 352

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           + VVSW S+I+   K G    A  VF+EM             GL                
Sbjct: 353 RDVVSWTSIISAYGKCGQGRDAVAVFAEMRN----------SGLNP-------------- 388

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
                  D +  V V +AC + G LD  ++ +  + + GI   ++    +VD+  R G  
Sbjct: 389 -------DSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKI 441

Query: 524 QRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
             A    R+M  + D   W   + A  +  N
Sbjct: 442 DEAYGFIRQMPLEPDERVWGPLLSACRVYSN 472


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/604 (39%), Positives = 353/604 (58%), Gaps = 37/604 (6%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++ AC  L  L    ++  +I +LG + N L++           A+  A  L    +D  
Sbjct: 13  ILQACNTLPKLA---QLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDAR 69

Query: 305 L---VLCNTIMSNYVRLGLARE-ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           +    L +TI+  Y     ++  A+   + ML +G  P++      + A A L DL  G+
Sbjct: 70  VYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGK 129

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             HG +++ G +    + NTM+ MY  C                              +G
Sbjct: 130 AVHGSLVKFGFDDDIFVQNTMVHMYCCC------------------------------SG 159

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
            +E AR++F EMP  D ++W  M+GG  +      A+ LFR M    +  D VTMV V S
Sbjct: 160 GMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLS 219

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC  LGAL+L KWI +YIEK  +   ++L+ ALVDMFA+CGD  +A+ +FR M KR + +
Sbjct: 220 ACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVS 279

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           WT+ I  +AM G G +AV LF EM   G+ P+ I F+G+L+ACSH GLV +G   F  MT
Sbjct: 280 WTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMT 339

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
              G+ P+I HYGCMVDLL RAGL+ EAL+ ++ MP+EPN +IW +L++AC+ H  + + 
Sbjct: 340 RQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLG 399

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
              ++++   +P     +VLLSNIY     W   +++R+ M ++GI+K+PGS+ IE++ +
Sbjct: 400 ESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNE 459

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           +HEF  GD SH + N I  M+ EM   ++ AGY P  T V LD+DE++K+  LS HSEKL
Sbjct: 460 IHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRHSEKL 519

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+AF L++T    PIR+ KNLR+C DCHS +K +SK+Y+REI++RD +RFH FR G CSC
Sbjct: 520 AIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDRSRFHHFRDGQCSC 579

Query: 841 SDFW 844
            DFW
Sbjct: 580 GDFW 583



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 207/405 (51%), Gaps = 9/405 (2%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           + P +  L+ C TL +L Q H HI+K G  + P  ++K     + +   +++ YA  +  
Sbjct: 7   EQPCLDILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNL---DAIPYAM-SLV 62

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGILPDKFTFPFVLNACTK 150
           + ++D       F+++++IR Y+        AI  Y  + G+GI P+K+ FPFVL AC  
Sbjct: 63  FSVEDARVYDA-FLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAG 121

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC-GDIVDGRRVFDEMSERNVVSWTS 209
                 G  VHG++VK GFD D+FV+N +++ Y  C G +   R++FDEM + + V+WT+
Sbjct: 122 LRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTA 181

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I   AR      AV LF +M   G+ P+ VTMV V+SAC  L  LELG  + +YI++  
Sbjct: 182 MIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKER 241

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           +     + NALVDM+ KCG VD A  LF     R +V   +++      G   EA+++ +
Sbjct: 242 VLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFE 301

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKC 388
           EM   G  P+ +  +  +SA +  G +  GR     + R  G+         M+D+  + 
Sbjct: 302 EMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRA 361

Query: 389 GKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
           G    A    + M      + W +LI+    +G+++    +  ++
Sbjct: 362 GLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQL 406



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 190/440 (43%), Gaps = 59/440 (13%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI------------VD 191
           +L AC          Q+H  I+K+GF  +  V   L  F     ++            V+
Sbjct: 13  ILQACNTLPKLA---QLHTHIIKLGFQNNPLV---LTKFTSASSNLDAIPYAMSLVFSVE 66

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKE-AVYLFFEMVEEGIKPNSVTMVCVISACA 250
             RV+D         ++++I A A     K  A++ +  M+  GI PN      V+ ACA
Sbjct: 67  DARVYD------AFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACA 120

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC-GAVDTAKQLFGECKDRNLVLCN 309
            L++L LG  V   + + G   +  + N +V MY  C G ++ A++LF E    + V   
Sbjct: 121 GLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWT 180

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++  Y RLG +  A+ +  +M + G  PD VTM+S +SA   LG L  G+    Y+ + 
Sbjct: 181 AMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKE 240

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            +     + N ++DM+ KCG                               DV+ A  +F
Sbjct: 241 RVLKTVELSNALVDMFAKCG-------------------------------DVDKALGLF 269

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
             M  R  +SW +++ GL       EA+ LF  M +  +  + +  +G+ SAC + G ++
Sbjct: 270 RNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVE 329

Query: 490 LAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
             +  ++ + +  GI   ++    +VD+ +R G    A++   RM  + +   W   I A
Sbjct: 330 RGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISA 389

Query: 548 MAMEGNGEQAVELFNEMLRQ 567
             + G  +    +  +++R 
Sbjct: 390 CRVHGELKLGESISKQLIRN 409


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/721 (35%), Positives = 387/721 (53%), Gaps = 49/721 (6%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDE--MSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           D+     LI  Y   GD+   R++F +  +  R+ V + ++I A +       A+ LF +
Sbjct: 78  DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLE--LGDRVCAYIDELGMKANALMVNALVDMYMKC 287
           M  +  +P++ T   V+ A A +   E       CA +   G      ++NAL+  Y+KC
Sbjct: 138 MQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKS-GTGFVTSVLNALISSYVKC 196

Query: 288 GA---------VDTAKQLFGECKDRNLVLCNTIMSNYVR--------------------- 317
            A         +  A++LF E  +R+ +   TI++ YV+                     
Sbjct: 197 AASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVA 256

Query: 318 ----------LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
                      GL  EA  +  +M++   + D  T  S +S  A  G    G+  H Y L
Sbjct: 257 WNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFL 316

Query: 368 RNGLEGWDSIC----NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
           +        +     N +I  Y KCGK ++A  IF+ M  + +VSWN +++G +    ++
Sbjct: 317 KTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMD 376

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
            A+  F+EMP ++ +SW  M+ GL Q    EEA++ F  M  +  +       G   +C 
Sbjct: 377 EAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCS 436

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
            LG+L   + ++A + + G    +    AL+ M+ARCG    A  +F  M   D  +W A
Sbjct: 437 VLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNA 496

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I A+   G G QA+ELF EML++GI PD I F+ V++ACSH GLV +G   F SM +++
Sbjct: 497 MIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVY 556

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
           GV+P   HY  ++DLL RAG   EA ++++SMP EP   IW +LLA C+ H N+D+   A
Sbjct: 557 GVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEA 616

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
           AER+ EL P+  G +VLLSN+YA AG+W ++A+VR  M+++G++K PG S IEV  KVH 
Sbjct: 617 AERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHS 676

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F  GD +HPE+  I + L ++   +R  GYVPD   VL DV+   K++ LS HSEKLA+A
Sbjct: 677 FLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVA 736

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           +G +       +RV KNLR+C DCH+  K +SKV  REI+VRD  RFH FR G CSC D+
Sbjct: 737 YGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDY 796

Query: 844 W 844
           W
Sbjct: 797 W 797



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 220/549 (40%), Gaps = 119/549 (21%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV-QVHGA 163
            YN++I  YS    G  AI L+ ++      PD +TF  VL A    +   +   Q+H A
Sbjct: 114 FYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCA 173

Query: 164 IVKMGFDRDVFVENCLINFYGECGD---------IVDGRRVFDEMSERNVVSWTS----- 209
           +VK G      V N LI+ Y +C           + + R++FDEM  R+ +SWT+     
Sbjct: 174 VVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGY 233

Query: 210 --------------------------LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
                                     +I   A R L  EA  +F +M+   I+ +  T  
Sbjct: 234 VKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFT 293

Query: 244 CVISACAKLQNLELGDRVCAYI--------DELGMKANALMVNALVDMYMKCGAVDTAKQ 295
            VIS CA      LG  + AY          ++ M  N    NAL+  Y KCG VD A++
Sbjct: 294 SVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVN----NALITFYWKCGKVDIAQE 349

Query: 296 LFGECKDRNLVLCNTIMSNYV-------------------------------RLGLAREA 324
           +F +  +R+LV  N I+S YV                               ++G A EA
Sbjct: 350 IFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEA 409

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L   + M L G  P       A+ + + LG L  GR  H  V+R G E   S  N +I M
Sbjct: 410 LKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITM 469

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y +CG  + A  +F +M     +SWN++IA L ++G    A E+F E             
Sbjct: 470 YARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEE------------- 516

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGI 503
                             ML E I  DR++ + V SAC + G +   +  +  +    G+
Sbjct: 517 ------------------MLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGV 558

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFN 562
           + D +    ++D+  R G    A +V   M  +     W A +    + GN +  +E   
Sbjct: 559 NPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAE 618

Query: 563 EMLRQGIKP 571
            +    +KP
Sbjct: 619 RLFE--LKP 625



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 217/499 (43%), Gaps = 97/499 (19%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES------LTYAQKAFDY---------- 92
           +Q HC ++K G G   S ++ ++ +  +     S      +  A+K FD           
Sbjct: 168 QQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWT 227

Query: 93  -----YIKDNE----------TSATL-FMYNSLIRGYSCIGLGVEAISLYVELAGFGILP 136
                Y+K+N+          TS  L   +N++I GY+  GL +EA  ++ ++    I  
Sbjct: 228 TIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQL 287

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKM----GFDRDVFVENCLINFYGECG----- 187
           D+FTF  V++ C  +  F  G ++H   +K       D  + V N LI FY +CG     
Sbjct: 288 DEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIA 347

Query: 188 ----------DIV----------------DGRRVFDEMSERNVVSWTSLICACARRDLPK 221
                     D+V                + +  F+EM E+N++SW  +I   A+    +
Sbjct: 348 QEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAE 407

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+  F  M  +G +P        I +C+ L +L+ G ++ A +   G +++    NAL+
Sbjct: 408 EALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALI 467

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            MY +CG VD A  LF      + +  N +++   + G   +A+ + +EML  G  PDR+
Sbjct: 468 TMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRI 527

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT------------MIDMYMKCG 389
           + L+ +SA +  G           +++ G + +DS+ N             +ID+  + G
Sbjct: 528 SFLTVISACSHAG-----------LVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAG 576

Query: 390 KQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGD----VESAREVFSEMPGRD--HISWNT 442
           K   A  + + M  +     W +L+AG   +G+    +E+A  +F   P  D  ++  + 
Sbjct: 577 KFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSN 636

Query: 443 MLGGLTQENMFEEAMELFR 461
           M     Q N   +  +L R
Sbjct: 637 MYAVAGQWNDMAKVRKLMR 655



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 147/369 (39%), Gaps = 63/369 (17%)

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
            R  H +++ +G +    I N +ID+Y K  K   A  +FD +    +V+  +LIA    
Sbjct: 32  ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91

Query: 419 NGDVESAREVFSEMP--GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            GD++ +R++FS+ P   RD + +N M+   +  +    A+ELF  M  +  + D  T  
Sbjct: 92  AGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFT 151

Query: 477 GVASACGYLGALDLA-------KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ----- 524
            V      LGAL L        + ++  + K+G      +  AL+  + +C         
Sbjct: 152 SV------LGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSS 205

Query: 525 ----RAMQVFRRMEKRDVSAWT-------------------------------AAIGAMA 549
                A ++F  M  RD  +WT                               A I   A
Sbjct: 206 SLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYA 265

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS-MTDIHGVSPQ 608
             G   +A E+F +M+   I+ D   F  V++ C++ G    G  +    +  +   +P 
Sbjct: 266 HRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPD 325

Query: 609 IVH--YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           +       ++    + G +  A ++   MP E + V W  +L+    + NV     A   
Sbjct: 326 VAMPVNNALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSG---YVNVRCMDEAKSF 381

Query: 667 ITELDPEKS 675
             E+ PEK+
Sbjct: 382 FNEM-PEKN 389


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/741 (34%), Positives = 408/741 (55%), Gaps = 59/741 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHGA 163
           YN++I GY    L     SL  +L  F  +P++  F++  +L    ++   GE  ++   
Sbjct: 80  YNAMISGY----LRNAKFSLARDL--FDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDL 133

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           + K    +DV   N +++ Y + G + + R VF++M  RN +SW  L+ A       KEA
Sbjct: 134 MPK----KDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEA 189

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
             LF    E       ++  C++    K +N+ LGD      D + ++ + +  N ++  
Sbjct: 190 RRLF----ESQSNWELISWNCLMGGYVK-RNM-LGD-ARQLFDRMPVR-DVISWNTMISG 241

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y + G +  AK+LF E   R++     ++S YV+ G+  EA    DEM    P  + ++ 
Sbjct: 242 YAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM----PVKNEISY 297

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
                                              N M+  Y++  K  +A  +F+ M  
Sbjct: 298 -----------------------------------NAMLAGYVQYKKMVIAGELFEAMPC 322

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           + + SWN++I G  +NG +  AR++F  MP RD +SW  ++ G  Q   +EEA+ +F  M
Sbjct: 323 RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEM 382

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
             +    +R T     S C  + AL+L K ++  + K G      +  AL+ M+ +CG  
Sbjct: 383 KRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGST 442

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A  VF  +E++DV +W   I   A  G G QA+ LF  M + G+KPD I  VGVL+AC
Sbjct: 443 DEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSAC 502

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SH GL+++G   F SM   + V P   HY CM+DLLGRAG L EA +L+++MP +P    
Sbjct: 503 SHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAAS 562

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           WG+LL A + H N ++   AAE + +++P+ SG++VLLSN+YA++G+W +V ++R +M+E
Sbjct: 563 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMRE 622

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
            G++K+ G S +EV  K+H F+ GD  HPE + I + L E++ ++R  GYV     VL D
Sbjct: 623 AGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 682

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           V+E+EK+++L +HSEKLA+AFG+++     PIRV+KNLR+C DCH+  K +SK+  R II
Sbjct: 683 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLII 742

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           +RD++RFH F +G CSC D+W
Sbjct: 743 LRDSHRFHHFSEGICSCGDYW 763



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 173/406 (42%), Gaps = 62/406 (15%)

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           KD ++V  N  +S+++R G    AL + + M    PR   V+                  
Sbjct: 42  KDPDIVTWNKAISSHMRNGHCDSALRVFNSM----PRRSSVSY----------------- 80

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
                             N MI  Y++  K  +A  +FD M  + + SWN ++ G ++N 
Sbjct: 81  ------------------NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNR 122

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
            +  A ++F  MP +D +SWN ML G  Q    +EA E+F  M       + ++  G+ +
Sbjct: 123 RLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLA 178

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           A  + G L  A+ ++    ++  + ++     L+  + +      A Q+F RM  RDV +
Sbjct: 179 AYVHNGRLKEARRLF----ESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVIS 234

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W   I   A  G+  QA  LFNE     I+ D   +  +++     G+V++    F  M 
Sbjct: 235 WNTMISGYAQVGDLSQAKRLFNE---SPIR-DVFTWTAMVSGYVQNGMVDEARKYFDEMP 290

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
             + +S     Y  M+    +   +  A +L ++MP   N   W +++      QN  IA
Sbjct: 291 VKNEIS-----YNAMLAGYVQYKKMVIAGELFEAMPCR-NISSWNTMITGYG--QNGGIA 342

Query: 661 AYAAERITELDPEKSGVH-VLLSNIYASAGKWTNVARVRLQMKEQG 705
              A ++ ++ P++  V    + + YA  G +     + ++MK  G
Sbjct: 343 --QARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDG 386


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/701 (35%), Positives = 378/701 (53%), Gaps = 32/701 (4%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L+A TK+   G+ +  H  +     +  +   N LINFY +   +     +FD M ERNV
Sbjct: 38  LSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNV 97

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VSW++L+          + + L  +M+ EG + PN   +   IS+C     +E G +   
Sbjct: 98  VSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHG 157

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            + + G   +  + NALV MY KC  V  A  ++ E    ++V  N+I+S+ V  G  RE
Sbjct: 158 LLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLRE 217

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            L +L  M+    + D+VT ++A S  A L DL  G   HG +L + +E    + + +I+
Sbjct: 218 GLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIIN 277

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCGK  MA  +FD + ++ VV W +++A   +NG                       
Sbjct: 278 MYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNG----------------------- 314

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
                    FEEA+ LF  M  E +K +  T   + +AC  L A      ++ + EK+G 
Sbjct: 315 --------CFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGF 366

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
              + +  AL++M+A+ GD + A +VF  M  RD+  W A I   +  G G++A+ +F +
Sbjct: 367 KHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQD 426

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           ML     P+ + F GVL+AC H GLV +G++    +    GV P + HY C+V LL + G
Sbjct: 427 MLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTG 486

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L EA + +++ PV+ + V W +LL AC  HQN  +  + AE + E+DP   G + LLSN
Sbjct: 487 QLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSN 546

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           IYA   +W  V +VR  M+++ I+K PG S IE+    H FTS D  HP+       ++E
Sbjct: 547 IYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKE 606

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           +   ++  GY PD+  VL DV++++K+Y LS+HSEKLA+A+GL+       I V+KNLR+
Sbjct: 607 LLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRI 666

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCHS  +L+SKV +R I+VRD NRFH FR G CSC D+W
Sbjct: 667 CDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 243/530 (45%), Gaps = 43/530 (8%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           + K L   K  H H++      + S I +V            ++ A   FD   + N  S
Sbjct: 41  DTKNLKVGKTIHSHLIVTSRATENSII-EVNSLINFYAKVNQVSIAHNLFDRMPERNVVS 99

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQ 159
                +++L+ GY   G  ++ I L  ++   G + P+++     +++C       EG Q
Sbjct: 100 -----WSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
            HG ++K GF    +V N L++ Y +C  + D   V++E+   ++V++ S++ +      
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            +E + +   MV E +K + VT V   S CA L++L LG  V   +    ++ +A + +A
Sbjct: 215 LREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSA 274

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           +++MY KCG    A+ +F   + RN+VL   +M++  + G   EAL +  +M     + +
Sbjct: 275 IINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSN 334

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T    ++A A L     G + HG+  ++G +    + N +I+MY K G  E A ++F 
Sbjct: 335 EFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFS 394

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M ++ +++WN++I G   +G                       LG        ++A+ +
Sbjct: 395 DMMHRDIITWNAMICGFSHHG-----------------------LG--------KKALLV 423

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFA 518
           F+ ML+     + VT  GV SACG+LG +     +++  +++ G+   ++  T +V + +
Sbjct: 424 FQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLS 483

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           + G    A    R    K DV AW   + A  +  N   G    E   EM
Sbjct: 484 KTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEM 533


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/791 (32%), Positives = 427/791 (53%), Gaps = 37/791 (4%)

Query: 58  QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
            G+  K   I  +    A +  +    +  +A + +  D      L  +NSLIRG+S  G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF--DKMPEQNLISWNSLIRGFSENG 290

Query: 118 LGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFV 175
             +EA   +  L  +G G++PD  T   +L  C+       G+ +HG  VK+G   ++ V
Sbjct: 291 FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMV 350

Query: 176 ENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV--EE 233
            N LI+ Y +CG + +   +F ++  ++VVSW S+I A +R     E   L  +M   EE
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
            ++ N VT++ ++ AC +   L     +  Y      +   L+ NA +  Y KCG++  A
Sbjct: 411 LMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFA 470

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           + +F     +++   N ++  + + G   +AL    EM   G  PD  +++S + A  +L
Sbjct: 471 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRL 530

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
           G L  G+  HG+VLRNGLE    +  +++ +Y  C K                       
Sbjct: 531 GLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG------------------- 571

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
                       R  F  M  ++ + WN ML G +Q  +  EA+ LFR MLS+ ++ D +
Sbjct: 572 ------------RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEI 619

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
            +  +  AC  L AL L K ++ +  KN +  D  +A +L+DM+A+ G    + ++F R+
Sbjct: 620 AIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRL 679

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
             ++V++W   I    + G G +AVELF +M R   +PD   F+GVL AC H GLV++G 
Sbjct: 680 NGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGL 739

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
           +    M  ++ + P++ HY C++D+LGRAG L EAL+ I  MP EP+  IW SLL++   
Sbjct: 740 NYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSIT 799

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           + ++++    AE++  L+  K+  ++LLSN+YA+AGKW  V  VR +MK+  ++K  G S
Sbjct: 800 YVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCS 859

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            IE+ GKV+ F +G+ S+P  + I  M   +  ++ + GY PD + VL +++E EK+ +L
Sbjct: 860 WIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKIL 919

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
             HSEK+A+ FG ++T +   +R+ KNLR+C DCH+ AK +SK   REI++RDN RFH F
Sbjct: 920 KGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHF 979

Query: 834 RQGSCSCSDFW 844
           ++G CSC D+W
Sbjct: 980 KKGICSCGDYW 990



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/495 (31%), Positives = 246/495 (49%), Gaps = 36/495 (7%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAF 154
           D   +  LF +N+L+ GY    L  EAI  ++EL       PD FTFP ++ ACT     
Sbjct: 167 DRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDI 226

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  VHG  VKMG   D+FV N +I  YG+CG + +   +FD+M E+N++SW SLI   
Sbjct: 227 HLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF 286

Query: 215 ARRDLPKEAVYLFFEMVE--EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
           +      EA   F  ++E  +G+ P+  TMV ++  C+   N+++G  +     +LG+  
Sbjct: 287 SENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVH 346

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
             ++ NAL+DMY KCG +  A  LF + +++++V  N+++  Y R G   E   +L +M 
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMW 406

Query: 333 LHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           +       + VT+L+ + A  +  +LL  R  HGY LR+  +  + I N  I  Y KCG 
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  +F  M+ K+V SWN++I G  +NGD   A + + EM         T LG     
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM---------TRLG----- 512

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
                            I  D  ++V +  ACG LG L   K I+ ++ +NG+  +  +A
Sbjct: 513 -----------------ILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVA 555

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            +L+ ++  C  P      F RM  ++   W A +   +      +A+ LF +ML  G++
Sbjct: 556 VSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLE 615

Query: 571 PDSIVFVGVLTACSH 585
           PD I    +L ACS 
Sbjct: 616 PDEIAIASILGACSQ 630



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 247/561 (44%), Gaps = 66/561 (11%)

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGD 188
           AG+ +   K     +L  C +      G ++   + V   F  D  +   LI  Y  CG 
Sbjct: 99  AGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGY 158

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVIS 247
            ++ R VFD +  +N+  W +L+    R +L  EA++ F E++     +P++ T  C+I 
Sbjct: 159 PLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIK 218

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC    ++ LG  V     ++G+  +  + NA++ +Y KCG +D A +LF +  ++NL+ 
Sbjct: 219 ACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLIS 278

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPR--PDRVTMLSAVSASAQLGDLLCGRMCHGY 365
            N+++  +   G   EA      +L  G    PD  TM++ +   +  G++  G + HG 
Sbjct: 279 WNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGM 338

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
            ++ GL     +CN +IDMY KCG    A  +F  + NK+VVSWNS+I    + G V   
Sbjct: 339 AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFET 398

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
            ++  +M       W           M EE ME           V+ VT++ +  AC   
Sbjct: 399 FDLLRKM-------W-----------MEEELME-----------VNEVTILNLLPACLEE 429

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
             L   + ++ Y  ++       +  A +  +A+CG    A  VF  M  + VS+W A I
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVI 489

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF-------RS 598
           G  A  G+  +A++ + EM R GI PD    V +L AC   GL+  G  +          
Sbjct: 490 GGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLE 549

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRA-----------------------GLLGEALDLIKSM 635
           M     VS   +++ C     GR                         L  EAL L + M
Sbjct: 550 MNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQM 609

Query: 636 ---PVEPNDVIWGSLLAACQK 653
               +EP+++   S+L AC +
Sbjct: 610 LSDGLEPDEIAIASILGACSQ 630



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 191/390 (48%), Gaps = 19/390 (4%)

Query: 48  LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYN 107
           L+  H + L+    +K    +  +   A+ G   SL +A+  F + +     S+    +N
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCG---SLVFAEHVF-FGMNTKSVSS----WN 486

Query: 108 SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
           ++I G++  G  ++A+  Y E+   GILPD F+   +L AC +      G ++HG +++ 
Sbjct: 487 AVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRN 546

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
           G + + FV   L++ Y  C     GR  F+ M ++N V W +++   ++ +LP EA+ LF
Sbjct: 547 GLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLF 606

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            +M+ +G++P+ + +  ++ AC++L  L LG  V  +  +  +  +  +  +L+DMY K 
Sbjct: 607 RQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKS 666

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +  ++++F     + +   N +++ +   G   +A+ + ++M     +PDR T L  +
Sbjct: 667 GFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVL 726

Query: 348 SASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            A    G +  G     +M   Y L   LE +  +    IDM  + G+   A    + M 
Sbjct: 727 QACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACV----IDMLGRAGRLNEALNFINEMP 782

Query: 403 NKTVVS-WNSLIAGLIKNGDVESAREVFSE 431
            +     W+SL++  I   D+E   E F+E
Sbjct: 783 EEPDAKIWSSLLSSSITYVDLEMG-EKFAE 811


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/791 (32%), Positives = 427/791 (53%), Gaps = 37/791 (4%)

Query: 58  QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
            G+  K   I  +    A +  +    +  +A + +  D      L  +NSLIRG+S  G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF--DKMPEQNLISWNSLIRGFSENG 290

Query: 118 LGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFV 175
             +EA   +  L  +G G++PD  T   +L  C+       G+ +HG  VK+G   ++ V
Sbjct: 291 FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMV 350

Query: 176 ENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV--EE 233
            N LI+ Y +CG + +   +F ++  ++VVSW S+I A +R     E   L  +M   EE
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
            ++ N VT++ ++ AC +   L     +  Y      +   L+ NA +  Y KCG++  A
Sbjct: 411 LMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFA 470

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           + +F     +++   N ++  + + G   +AL    EM   G  PD  +++S + A  +L
Sbjct: 471 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRL 530

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
           G L  G+  HG+VLRNGLE    +  +++ +Y  C K                       
Sbjct: 531 GLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG------------------- 571

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
                       R  F  M  ++ + WN ML G +Q  +  EA+ LFR MLS+ ++ D +
Sbjct: 572 ------------RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEI 619

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
            +  +  AC  L AL L K ++ +  KN +  D  +A +L+DM+A+ G    + ++F R+
Sbjct: 620 AIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRL 679

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
             ++V++W   I    + G G +AVELF +M R   +PD   F+GVL AC H GLV++G 
Sbjct: 680 NGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGL 739

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
           +    M  ++ + P++ HY C++D+LGRAG L EAL+ I  MP EP+  IW SLL++   
Sbjct: 740 NYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSIT 799

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           + ++++    AE++  L+  K+  ++LLSN+YA+AGKW  V  VR +MK+  ++K  G S
Sbjct: 800 YVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCS 859

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            IE+ GKV+ F +G+ S+P  + I  M   +  ++ + GY PD + VL +++E EK+ +L
Sbjct: 860 WIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKIL 919

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
             HSEK+A+ FG ++T +   +R+ KNLR+C DCH+ AK +SK   REI++RDN RFH F
Sbjct: 920 KGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHF 979

Query: 834 RQGSCSCSDFW 844
           ++G CSC D+W
Sbjct: 980 KKGICSCGDYW 990



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/495 (31%), Positives = 245/495 (49%), Gaps = 36/495 (7%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAF 154
           D   +  LF +N+L+ GY    L  EAI  ++EL       PD FTFP ++ ACT     
Sbjct: 167 DRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDI 226

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  VHG  VKMG   D+FV N +I  YG+CG + +   +FD+M E+N++SW SLI   
Sbjct: 227 HLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGF 286

Query: 215 ARRDLPKEAVYLFFEMVE--EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
           +      EA   F  ++E  +G+ P+  TMV ++  C+   N+++G  +     +LG+  
Sbjct: 287 SENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVH 346

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
             ++ NAL+DMY KCG +  A  LF + +++++V  N+++  Y R G   E   +L +M 
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMW 406

Query: 333 LHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           +       + VT+L+ + A  +  +LL  R  HGY LR+  +  + I N  I  Y KCG 
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  +F  M+ K+V SWN++I G  +NGD   A + + EM         T LG     
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM---------TRLG----- 512

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
                            I  D  ++V +  ACG LG L   K I+ ++ +NG+  +  +A
Sbjct: 513 -----------------ILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVA 555

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            +L+ ++  C  P      F  M  ++   W A +   +      +A+ LF +ML  G++
Sbjct: 556 VSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLE 615

Query: 571 PDSIVFVGVLTACSH 585
           PD I    +L ACS 
Sbjct: 616 PDEIAIASILGACSQ 630



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 247/561 (44%), Gaps = 66/561 (11%)

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGD 188
           AG+ +   K     +L  C +      G ++   + V   F  D  +   LI  Y  CG 
Sbjct: 99  AGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGY 158

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVIS 247
            ++ R VFD +  +N+  W +L+    R +L  EA++ F E++     +P++ T  C+I 
Sbjct: 159 PLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIK 218

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC    ++ LG  V     ++G+  +  + NA++ +Y KCG +D A +LF +  ++NL+ 
Sbjct: 219 ACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLIS 278

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPR--PDRVTMLSAVSASAQLGDLLCGRMCHGY 365
            N+++  +   G   EA      +L  G    PD  TM++ +   +  G++  G + HG 
Sbjct: 279 WNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGM 338

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
            ++ GL     +CN +IDMY KCG    A  +F  + NK+VVSWNS+I    + G V   
Sbjct: 339 AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFET 398

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
            ++  +M       W           M EE ME           V+ VT++ +  AC   
Sbjct: 399 FDLLRKM-------W-----------MEEELME-----------VNEVTILNLLPACLEE 429

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
             L   + ++ Y  ++       +  A +  +A+CG    A  VF  M  + VS+W A I
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVI 489

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF-------RS 598
           G  A  G+  +A++ + EM R GI PD    V +L AC   GL+  G  +          
Sbjct: 490 GGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLE 549

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRA-----------------------GLLGEALDLIKSM 635
           M     VS   +++ C     GR                         L  EAL L + M
Sbjct: 550 MNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQM 609

Query: 636 ---PVEPNDVIWGSLLAACQK 653
               +EP+++   S+L AC +
Sbjct: 610 LSDGLEPDEIAIASILGACSQ 630



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 191/390 (48%), Gaps = 19/390 (4%)

Query: 48  LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYN 107
           L+  H + L+    +K    +  +   A+ G   SL +A+  F + +     S+    +N
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCG---SLVFAEHVF-FGMNTKSVSS----WN 486

Query: 108 SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
           ++I G++  G  ++A+  Y E+   GILPD F+   +L AC +      G ++HG +++ 
Sbjct: 487 AVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRN 546

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
           G + + FV   L++ Y  C     GR  F+ M ++N V W +++   ++ +LP EA+ LF
Sbjct: 547 GLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLF 606

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            +M+ +G++P+ + +  ++ AC++L  L LG  V  +  +  +  +  +  +L+DMY K 
Sbjct: 607 RQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKS 666

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +  ++++F     + +   N +++ +   G   +A+ + ++M     +PDR T L  +
Sbjct: 667 GFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVL 726

Query: 348 SASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            A    G +  G     +M   Y L   LE +  +    IDM  + G+   A    + M 
Sbjct: 727 QACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACV----IDMLGRAGRLNEALNFINEMP 782

Query: 403 NKTVVS-WNSLIAGLIKNGDVESAREVFSE 431
            +     W+SL++  I   D+E   E F+E
Sbjct: 783 EEPDAKIWSSLLSSSITYVDLEMG-EKFAE 811


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/815 (33%), Positives = 429/815 (52%), Gaps = 44/815 (5%)

Query: 34  PSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           PS+  LK C  L E +   + H   +K G G    ++       A  G    L  A+  F
Sbjct: 149 PSV--LKACGALGESRLGAEIHGVAVKCGYG---EFVFVCNALIAMYGKCGDLGGARVLF 203

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           D  + + E + +   +NS+I  +   G  +EA+SL+  +   G+  + +TF   L     
Sbjct: 204 DGIMMEKEDTVS---WNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVED 260

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
            S    G+ +HGA++K     DV+V N LI  Y +CG + D  RVF+ M  R+ VSW +L
Sbjct: 261 PSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTL 320

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           +    + +L  +A+  F +M   G KP+ V+++ +I+A  +  NL  G  V AY    G+
Sbjct: 321 LSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGL 380

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
            +N  + N LVDMY KC  V      F    +++L+   TI++ Y +     EA+ +  +
Sbjct: 381 DSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRK 440

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           + + G   D + + S + A + L      R  HGYV +  L     + N ++++Y + G 
Sbjct: 441 VQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADI-MLQNAIVNVYGEVGH 499

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
                                          ++ AR  F  +  +D +SW +M+      
Sbjct: 500 -------------------------------IDYARRAFESIRSKDIVSWTSMITCCVHN 528

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
            +  EA+ELF  +    I+ D + ++   SA   L +L   K I+ ++ + G   +  +A
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           ++LVDM+A CG  + + ++F  +++RD+  WT+ I A  M G G +A+ LF +M  Q + 
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVI 648

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD I F+ +L ACSH GL+ +G   F  M   + + P   HY CMVDLL R+  L EA  
Sbjct: 649 PDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYH 708

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            +++MP++P+  IW +LL AC  H N ++   AA+ + + D E SG + L+SNI+A+ G+
Sbjct: 709 FVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGR 768

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL-R 749
           W +V  VRL+MK  G++K PG S IEV+ K+H F + D+SHP+ ++I   L +    L +
Sbjct: 769 WNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEK 828

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
             GY+     V  +V E+EK  +L  HSE+LA+ +GL+ T K   IR+ KNLR+C DCH+
Sbjct: 829 KGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHT 888

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           F K+ S+V  R ++VRD NRFH F +G CSC DFW
Sbjct: 889 FFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 201/690 (29%), Positives = 325/690 (47%), Gaps = 88/690 (12%)

Query: 4   TLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNC---KTLNELKQPHCHILKQGL 60
           TLN   L  A  ++T L+    A  +  +      L  C   K L + +Q H  +LK   
Sbjct: 18  TLNKGTLKPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKS-- 75

Query: 61  GHKPSYI-SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLG 119
            H  +++ +K+V    + G   SL  A K FD       +  T+F +N+L+  +   G  
Sbjct: 76  -HLSAFLATKLVLMYGKCG---SLRDAVKVFD-----EMSERTIFSWNALMGAFVSSGKY 126

Query: 120 VEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE---GVQVHGAIVKMGFDRDVFVE 176
           +EAI LY ++   G+  D  TFP VL AC    A GE   G ++HG  VK G+   VFV 
Sbjct: 127 LEAIELYKDMRVLGVAIDACTFPSVLKAC---GALGESRLGAEIHGVAVKCGYGEFVFVC 183

Query: 177 NCLINFYGECGDIVDGRRVFDE--MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           N LI  YG+CGD+   R +FD   M + + VSW S+I A        EA+ LF  M E G
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVG 243

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           +  N+ T V  +        ++LG  +   + +    A+  + NAL+ MY KCG ++ A 
Sbjct: 244 VASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAG 303

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           ++F     R+ V  NT++S  V+  L  +AL    +M   G +PD+V++L+ ++AS + G
Sbjct: 304 RVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSG 363

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           +LL G+  H Y +RNGL+    I NT++DMY KC   +     F+ M  K ++SW ++IA
Sbjct: 364 NLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIA 423

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G  +N                                   EA+ LFR +  + + VD + 
Sbjct: 424 GYAQN-------------------------------EFHLEAINLFRKVQVKGMDVDPMM 452

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +  V  AC  L + +  + I+ Y+ K  +  D+ L  A+V+++   G    A + F  + 
Sbjct: 453 IGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIR 511

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS---------- 584
            +D+ +WT+ I      G   +A+ELF  + +  I+PDSI  +  L+A +          
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571

Query: 585 -HGGLVNQGWHL----FRSMTDI--------------HGVSPQ-IVHYGCMVDLLGRAGL 624
            HG L+ +G+ L      S+ D+              H V  + ++ +  M++  G  G 
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631

Query: 625 LGEALDLIKSMP---VEPNDVIWGSLLAAC 651
             +A+ L K M    V P+ + + +LL AC
Sbjct: 632 GNKAIALFKKMTDQNVIPDHITFLALLYAC 661


>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Glycine max]
          Length = 629

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/565 (41%), Positives = 348/565 (61%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+ +Y K   +D A +LF   ++ N+ L  +++  +V  G   +A+ +  +M+      D
Sbjct: 65  LLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLAD 124

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
              + + + A      L  G+  HG VL++GL    SI   ++++Y KCG  E A ++FD
Sbjct: 125 NYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFD 184

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M  + VV+   +I      G VE A EVF+EM  RD + W  ++ GL +   F   +E+
Sbjct: 185 GMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEV 244

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           FR M  + ++ + VT V V SAC  LGAL+L +WI+AY+ K G+  +  +A AL++M++R
Sbjct: 245 FREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSR 304

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CGD   A  +F  +  +DVS + + IG +A+ G   +AVELF+EML++ ++P+ I FVGV
Sbjct: 305 CGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGV 364

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L ACSHGGLV+ G  +F SM  IHG+ P++ HYGCMVD+LGR G L EA D I  M VE 
Sbjct: 365 LNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEA 424

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
           +D +  SLL+AC+ H+N+ +    A+ ++E     SG  ++LSN YAS G+W+  A VR 
Sbjct: 425 DDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVRE 484

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
           +M++ GI K PG SSIEVN  +HEF SGD  HPE   I   L E+N   +  GY+P    
Sbjct: 485 KMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYLTKFEGYLPATEV 544

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
            L D+D+++K+  L+ HSE+LA+ +GL+ST     +RV KNLR+C DCH+  KL++K+  
Sbjct: 545 ALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVGKNLRICDDCHAMIKLIAKITR 604

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           R+I+VRD NRFH F  G CSC D+W
Sbjct: 605 RKIVVRDRNRFHHFENGECSCKDYW 629



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 143/575 (24%), Positives = 263/575 (45%), Gaps = 89/575 (15%)

Query: 3   LTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSL--KNCKTLNELKQPHCHILKQGL 60
           + ++P P ++A      L N H +         I SL  KN K    ++  HCH +K   
Sbjct: 1   MIISPVPTIIAN-----LPNPHSSSHDSNLRRVIISLLHKNRKNPKHVQSIHCHAIKTRT 55

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
              P    ++      +  +  + Y   A   +      +  +++Y SLI G+   G   
Sbjct: 56  SQDPFVAFEL------LRVYCKVNYIDHAIKLF--RCTQNPNVYLYTSLIDGFVSFGSYT 107

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +AI+L+ ++    +L D +    +L AC    A G G +VHG ++K G   D  +   L+
Sbjct: 108 DAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLV 167

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-------- 232
             YG+CG + D R++FD M ER+VV+ T +I +C    + +EA+ +F EM          
Sbjct: 168 ELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTM 227

Query: 233 -----------------------EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
                                  +G++PN VT VCV+SACA+L  LELG  + AY+ + G
Sbjct: 228 VIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCG 287

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           ++ N  +  AL++MY +CG +D A+ LF   + +++   N+++      G + EA+ +  
Sbjct: 288 VEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFS 347

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDL-LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
           EML    RP+ +T +  ++A +  G + L G +     + +G+E        M+D+  + 
Sbjct: 348 EMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRV 407

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G+ E A   FD +    V + + ++  L+      SA ++   +                
Sbjct: 408 GRLEEA---FDFIGRMGVEADDKMLCSLL------SACKIHKNI---------------- 442

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH---- 504
              M E+  +L    LSE  ++D  + + +++    LG    A  +   +EK GI     
Sbjct: 443 --GMGEKVAKL----LSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPG 496

Query: 505 -CDMQLATALVDMFARCGD---PQRAMQVFRRMEK 535
              +++  A+ + F+  GD   P+R  ++++++E+
Sbjct: 497 CSSIEVNNAIHEFFS--GDLRHPERK-RIYKKLEE 528



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 41/191 (21%)

Query: 489 DLAKWIYAYIEKN--------GIHC---------DMQLATALVDMFARCGDPQRAMQVFR 531
           +L + I + + KN         IHC         D  +A  L+ ++ +      A+++FR
Sbjct: 24  NLRRVIISLLHKNRKNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFR 83

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC-------- 583
             +  +V  +T+ I      G+   A+ LF +M+R+ +  D+     +L AC        
Sbjct: 84  CTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGS 143

Query: 584 ---SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
               HG ++  G  L RS+               +V+L G+ G+L +A  +   MP E +
Sbjct: 144 GKEVHGLVLKSGLGLDRSIALK------------LVELYGKCGVLEDARKMFDGMP-ERD 190

Query: 641 DVIWGSLLAAC 651
            V    ++ +C
Sbjct: 191 VVACTVMIGSC 201


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/752 (34%), Positives = 398/752 (52%), Gaps = 35/752 (4%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTK 150
           +Y+    +   LF +N L+ GY+  G   EAI LY  +   G + PD +TFP VL  C  
Sbjct: 149 WYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGG 208

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
                 G +VH  +V+ G++ D+ V N LI  Y +CGD+   R +FD M  R+++SW ++
Sbjct: 209 IPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I       +  E + LFF M    + P+ +T+  VISAC  L +  LG  + AY+   G 
Sbjct: 269 ISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF 328

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             +  + N+L  MY+  G+   A++LF     +++V   T++S Y    L  +A+     
Sbjct: 329 AVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRM 388

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M     +PD +T+ + +SA A LGDL  G   H   ++  L  +  + N +I+MY KC  
Sbjct: 389 MDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC-- 446

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
               C                          ++ A ++F  +P ++ ISW +++ GL   
Sbjct: 447 ---KC--------------------------IDKALDIFHNIPRKNVISWTSIIAGLRLN 477

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
           N   EA+  FR M    ++ + +T+    +AC  +GAL   K I+A++ + G+  D  L 
Sbjct: 478 NRCFEALIFFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP 536

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            AL+DM+ RCG    A   F   +K+DVS+W   +   +  G G   VELF+ M++  ++
Sbjct: 537 NALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVR 595

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD I F+ +L  C    +V QG   F  M + +GV+P + HY C+VDLLGRAG L EA  
Sbjct: 596 PDEITFISLLCGCGKSQMVRQGLMYFSKMEE-YGVTPNLKHYACVVDLLGRAGELQEAHK 654

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            I+ MPV P+  +WG+LL AC+ H N+D+   +A+RI ELD    G ++LL N+YA  GK
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGK 714

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W  VA+VR  MKE G+    G S +EV GKVH F S D+ HP+   I+++L     ++ +
Sbjct: 715 WREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSE 774

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            G      +  +D  E  +  +   HSE+ A+AFGLI++   MPI V KNL +C  CH  
Sbjct: 775 VGLTTSSESSSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDT 834

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
            K +SK   REI VRD+  FH F+ G CSC D
Sbjct: 835 VKFISKTVRREISVRDSEHFHHFKDGECSCGD 866



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 248/519 (47%), Gaps = 45/519 (8%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L+ C  + +L   ++ H H+++ G       ++ ++    + G  +S   A+  FD   +
Sbjct: 203 LRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKS---ARLLFDRMPR 259

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S     +N++I GY   G+G E + L+  + G  + PD  T   V++AC       
Sbjct: 260 RDIIS-----WNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G  +H  ++  GF  D+ V N L   Y   G   +  ++F  M  +++VSWT++I    
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              LP++A+  +  M ++ +KP+ +T+  V+SACA L +L+ G  +     +  + +  +
Sbjct: 375 YNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + N L++MY KC  +D A  +F     +N++   +I++         EAL    +M +  
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKM-T 493

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+ +T+ +A++A A++G L+CG+  H +VLR G+   D + N ++DMY++CG+  +A 
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAW 553

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
             F+    K V SWN L+ G  + G                        G +        
Sbjct: 554 NQFNS-QKKDVSSWNILLTGYSERGQ-----------------------GSVV------- 582

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
            +ELF  M+  R++ D +T + +   CG    +      ++ +E+ G+  +++    +VD
Sbjct: 583 -VELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVD 641

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
           +  R G+ Q A +  ++M    D + W A + A  +  N
Sbjct: 642 LLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHN 680



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 202/438 (46%), Gaps = 35/438 (7%)

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           CA   L +EA+ L   M E  +  +    V ++  C   +  E G +V +         +
Sbjct: 70  CANGKL-EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLS 128

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML- 332
             + NA + M+++ G +  A  +FG+  +RNL   N ++  Y + G   EA+ +   ML 
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLW 188

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           + G +PD  T    +     + DL  GR  H +V+R G E    + N +I MY+KCG  +
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +FD M  + ++SWN++I+G  +NG                               M
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENG-------------------------------M 277

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
             E ++LF  M    +  D +T+  V SAC  LG   L + I+AY+   G   D+ +  +
Sbjct: 278 GHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L  M+   G  + A ++F RM+ +D+ +WT  I         E+A++ +  M +  +KPD
Sbjct: 338 LTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPD 397

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            I    VL+AC+  G ++ G  L +       +S  IV    ++++  +   + +ALD+ 
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIF 456

Query: 633 KSMPVEPNDVIWGSLLAA 650
            ++P   N + W S++A 
Sbjct: 457 HNIP-RKNVISWTSIIAG 473


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/612 (39%), Positives = 354/612 (57%), Gaps = 40/612 (6%)

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           ++ N+ +   L+  Y     V TA+++F E  +RN+++ N ++ +YV  G  RE + +  
Sbjct: 71  LRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFG 130

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            M     +PD  T    + A +  G+++ G+  HG   + GL     + N ++ MY KCG
Sbjct: 131 TMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCG 190

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV--------------------- 428
               A  + D MS + VVSWNSL+AG  +N   + A EV                     
Sbjct: 191 FLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 250

Query: 429 ----------------FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
                           F +M  +  +SWN M+G   +  M  EA+EL+  M ++  + D 
Sbjct: 251 AVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDA 310

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           V++  V  ACG   AL L K I+ YIE+  +  ++ L  AL+DM+A+CG   RA  VF  
Sbjct: 311 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFEN 370

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M+ RDV +WTA I A    G G  AV LF++M   G+ PDSI FV  L ACSH GL+ +G
Sbjct: 371 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEG 430

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F+ MTD + ++P++ H  CMVDLLGRAG + EA   I+ MP+EPN+ +WG+LL AC+
Sbjct: 431 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACR 490

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H N DI   AA+++ +L PE+SG +VLLSNIYA AG+W  V  +R  MK +G++K PG+
Sbjct: 491 VHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 550

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           S++EVN  +H F  GD SHP+   I   L  +  ++++ GYVPD  + L DV+E++K+  
Sbjct: 551 SNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETH 610

Query: 773 LSHHSEKLAMAFGLISTSK---TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           L+ HSEKLA+ F L++T +      IR+ KNLR+C DCH  AKL+S++  REII+RD NR
Sbjct: 611 LAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNR 670

Query: 830 FHFFRQGSCSCS 841
           FH FR G CSC+
Sbjct: 671 FHVFRFGVCSCA 682



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 125/516 (24%), Positives = 210/516 (40%), Gaps = 108/516 (20%)

Query: 27  KTTPKDSPSI--GSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
           K +PK++  +    L     L  L+  H  I+ + L +  S   K++   A   + + + 
Sbjct: 36  KNSPKETAFMLGQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYA---SLKDVA 92

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
            A+K FD   + N     + + N +IR Y   G   E I ++  +    + PD +TFP V
Sbjct: 93  TARKVFDEIPERN-----VIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCV 147

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFD-------------------------------RDV 173
           L AC+ S     G ++HG+  K+G                                 RDV
Sbjct: 148 LKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 207

Query: 174 FVENCLINFYGECGDIVDGRRV-------------------------------------F 196
              N L+  Y +     D   V                                     F
Sbjct: 208 VSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMF 267

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
            +M ++++VSW  +I    +  +P EAV L+  M  +G +P++V++  V+ AC     L 
Sbjct: 268 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALS 327

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
           LG ++  YI+   +  N L+ NAL+DMY KCG +D A+ +F   K R++V    ++S Y 
Sbjct: 328 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYG 387

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG-----YVLRNGL 371
             G   +A+A+  +M   G  PD +  ++ ++A +  G L  GR C       Y +   L
Sbjct: 388 FSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 447

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           E     C  M+D+  + GK + A +    M                    +E    V+  
Sbjct: 448 EHL--AC--MVDLLGRAGKVKEAYKFIQEMP-------------------MEPNERVWGA 484

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMEL--FRVMLS 465
           + G   +  NT +G L  + +F+ A E   + V+LS
Sbjct: 485 LLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLS 520



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 4/174 (2%)

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L   + +++ I    +  +  L   L+  +A   D   A +VF  + +R+V      I +
Sbjct: 56  LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
               G   + +++F  M    +KPD   F  VL ACS  G +  G  +  S T + G+S 
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKV-GLSS 174

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
            +     +V + G+ G L EA  ++  M     DV+ W SL+A   ++Q  D A
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEM--SRRDVVSWNSLVAGYAQNQRFDDA 226


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/794 (31%), Positives = 423/794 (53%), Gaps = 39/794 (4%)

Query: 52  HCHILKQG-LGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLI 110
           H H++++G +G    + + V+      G    L  A++ FD   + N  S     + +L+
Sbjct: 82  HGHVVRRGGVGRLDLFCANVLLN--MYGKLGPLASARRLFDRMPERNMVS-----FVTLV 134

Query: 111 RGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFD 170
           + ++  G    A +L+  L   G   ++F    +L       A G    VH    K+G D
Sbjct: 135 QAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHD 194

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
            + FV + LI+ Y  C  + D   VF+ +  ++ V WT+++   +  D P+ A  +F +M
Sbjct: 195 HNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM 254

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
              G KPN   +  V+ A   L ++ LG  +     +        +  AL+DMY KCG +
Sbjct: 255 RVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDI 314

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
             A+  F      +++L + ++S Y +     +A  +   ++     P+  ++ S + A 
Sbjct: 315 KDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 374

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
             +  L  G+  H + ++ G E    + N ++D Y KC                      
Sbjct: 375 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN--------------------- 413

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                     D++S+ ++FS +   + +SWNT++ G +Q  + EEA+ +F  M + ++  
Sbjct: 414 ----------DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
            +VT   V  AC    ++  A  I+  IEK+  + D  +  +L+D +A+CG  + A++VF
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           + + +RD+ +W A I   A+ G    A+ELF+ M +  ++ + I FV +L+ CS  GLVN
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            G  LF SM   HG+ P + HY C+V LLGRAG L +AL  I  +P  P+ ++W +LL++
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C  H+NV +  ++AE+I E++P+    +VLLSN+YA+AG    VA +R  M+  G+RK+P
Sbjct: 644 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 703

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G S +E+ G++H F+ G   HP+M  I++ML  +N +    GY+PD+  VL DVD+++K 
Sbjct: 704 GLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKT 763

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
            +L  HSE+LA+A+GL+ T    PIR++KNLR C DCH+   ++SK+  REIIVRD NRF
Sbjct: 764 RMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRF 823

Query: 831 HFFRQGSCSCSDFW 844
           H F  G CSC D+W
Sbjct: 824 HHFEDGKCSCGDYW 837



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/572 (23%), Positives = 250/572 (43%), Gaps = 45/572 (7%)

Query: 128 ELAGFGILP-----DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF--DRDVFVENCLI 180
           EL    ILP     D F     L  C        G  VHG +V+ G     D+F  N L+
Sbjct: 44  ELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLL 103

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           N YG+ G +   RR+FD M ERN+VS+ +L+ A A+R   + A  LF  +  EG + N  
Sbjct: 104 NMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQF 163

Query: 241 TMVCVISACAKLQ--NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            +  ++     +    L  G   CA+  +LG   NA + + L+D Y  C  V  A+ +F 
Sbjct: 164 VLTTMLKLAIAMDAAGLAGGVHSCAW--KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
               ++ V+   ++S Y        A  +  +M + G +P+   + S + A+  L  ++ 
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G+  HG  ++   +    +   ++DMY KC                              
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKC------------------------------ 311

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
            GD++ AR  F  +P  D I  + M+    Q N  E+A ELF  ++   +  +  ++  V
Sbjct: 312 -GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSV 370

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC  +  LD  K I+ +  K G   D+ +  AL+D +A+C D   ++++F  +   + 
Sbjct: 371 LQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANE 430

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W   +   +  G GE+A+ +F EM    +    + +  VL AC+    +     +  S
Sbjct: 431 VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCS 490

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           + +    +   V    ++D   + G + +AL + + + +E + + W ++++    H    
Sbjct: 491 I-EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHGQAA 548

Query: 659 IAAYAAERITELDPEKSGV-HVLLSNIYASAG 689
            A    +R+ + + E + +  V L ++ +S G
Sbjct: 549 DALELFDRMNKSNVESNDITFVALLSVCSSTG 580


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/694 (34%), Positives = 382/694 (55%), Gaps = 31/694 (4%)

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           +S F    QVH +++      D F+ N L+              +F      N+  + +L
Sbjct: 23  ASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTL 82

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I       L  E + LF  + + G+  +  T   V+ AC +  N +LG  + + + + G 
Sbjct: 83  INGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGF 142

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             +   + +L+ +Y   G ++ A ++F E  +R++V    + S Y   G  REA+ +  +
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKK 202

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M+  G RPD   ++  +SA   +GDL  G     ++    ++    +  T++++Y KCGK
Sbjct: 203 MVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGK 262

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
                                          +E AR VF  M  +D ++W+TM+ G    
Sbjct: 263 -------------------------------MEKARSVFDSMGEKDIVTWSTMIQGYASN 291

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
           +  +E +E F  ML E +K D+ ++VG  S+C  LGALDL +W  + I+++    ++ +A
Sbjct: 292 SFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            AL+DM+A+CG   R  +VF+ M+++D+    AAI  +A  G+ + +  +F +  + GI 
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD   F+G+L  C H GL+  G   F +++ ++ +   + HYGCMVDL GRAG+L +A  
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           LI  MP+ PN ++WG+LL+ C+  ++  +A    + +  L+P  +G +V LSNIY+ +G+
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGR 531

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W   A VR  M  +G++K+PG S IE+ G VHEF + D+SHP  + I + L ++   +R 
Sbjct: 532 WDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            G+VP    V  DV+++EK+ +L HHSEKLA+AFGLIST     IRVVKNLR+C DCH  
Sbjct: 592 MGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEV 651

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KL+SK+  REI+VRDNNRFH F  GSCSC+D+W
Sbjct: 652 MKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  222 bits (566), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 266/561 (47%), Gaps = 35/561 (6%)

Query: 28  TTPKDSPSIGSLKN----CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
           T P  +  +  +K       T N LKQ H  ++   L H    ++ ++          +L
Sbjct: 5   TVPSSTSKVQQIKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLK--------RTL 56

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
            + Q  + + +  +     +F+YN+LI G+    L  E + L++ +   G+    FTFP 
Sbjct: 57  FFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPL 116

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL ACT++S    G+ +H  +VK GF+ DV     L++ Y   G + D  +VF+E+ ER+
Sbjct: 117 VLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERS 176

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VV+WT+L          +EA+ LF +MVE G++P+S  +V V+SAC  + +L+ G+ +  
Sbjct: 177 VVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVK 236

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           +++E+ M+ N+ +   LV++Y KCG ++ A+ +F    ++++V  +T++  Y      +E
Sbjct: 237 HMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKE 296

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            +    +ML    +PD+ +++  +S+ A LG L  G      + R+       + N +ID
Sbjct: 297 GIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP----GRDHIS 439
           MY KCG       +F  M  K +V  N+ I+GL KNG V+ +  VF +        D  +
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG-VASACGYLGALDLAKWIYAYI 498
           +  +L G     + ++ +  F  +         V   G +    G  G LD A   Y  I
Sbjct: 417 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA---YRLI 473

Query: 499 EKNGIHCDMQLAT------ALVDMFARCGDPQRAMQVFRR---MEKRDVSAWTAAIGAMA 549
                 CDM +        AL+       D Q A  V +    +E  +   +       +
Sbjct: 474 ------CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYS 527

Query: 550 MEGNGEQAVELFNEMLRQGIK 570
           + G  ++A E+ + M R+G+K
Sbjct: 528 VSGRWDEAAEVRDMMNRKGMK 548



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 200/449 (44%), Gaps = 47/449 (10%)

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELG----------MKANALMVNALVDMYMKCGA 289
           +++V V S+ +K+Q ++    V +  + L           +  +  +VN L+   +    
Sbjct: 1   MSIVTVPSSTSKVQQIKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQ 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
              +  LF   +  N+ L NT+++ +V   L  E L +   +  HG      T    + A
Sbjct: 61  THYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKA 120

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
             +  +   G   H  V+                   KCG        F+H     V + 
Sbjct: 121 CTRASNRKLGIDLHSLVV-------------------KCG--------FNH----DVAAM 149

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            SL++    +G +  A +VF E+P R  ++W  +  G T      EA++LF+ M+   ++
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +V V SAC ++G LD  +WI  ++E+  +  +  + T LV+++A+CG  ++A  V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M ++D+  W+  I   A     ++ +E F +ML++ +KPD    VG L++C+  G +
Sbjct: 270 FDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 590 NQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + G W +  S+ D H     +     ++D+  + G +    ++ K M  E + VI  + +
Sbjct: 330 DLGEWGI--SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAI 386

Query: 649 AACQK--HQNVDIAAYAAERITELDPEKS 675
           +   K  H  +  A +       + P+ S
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGS 415


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 272/871 (31%), Positives = 437/871 (50%), Gaps = 87/871 (9%)

Query: 52   HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
            H  ++K     +  +ISK  C   +   F    YA   F      N+ S   F+  +   
Sbjct: 444  HARMMKLIDRFELEFISK--CLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAE-- 499

Query: 112  GYSCIGLGVEAISL---YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
                   GVE   +   +V L   G+  D+     V   C        G  +HG ++K G
Sbjct: 500  -----DFGVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRG 554

Query: 169  FDR-DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
             D  D  V + L+ FYG C  +    ++FDEM +R+ ++W  ++    +    ++AV LF
Sbjct: 555  LDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLF 614

Query: 228  FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
              M   G K    TMV ++  C+  +    G ++  Y+  LG ++N  M N+L+ MY + 
Sbjct: 615  RVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRN 674

Query: 288  GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
            G +++++++F    DRNL   N+I+S+Y RLG   +A+ +LDEM   G +PD VT  S +
Sbjct: 675  GKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLL 734

Query: 348  SASA-----------------------------------QLGDLLCGRMCHGYVLRNGLE 372
            S  A                                   + G +  G+  HGYV+RN L 
Sbjct: 735  SGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLW 794

Query: 373  GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
                +  T+IDMY+K G    A  +FD M  K +V+WNSLI+GL   G ++ A  + S M
Sbjct: 795  YDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRM 854

Query: 433  PGR---------------------------------------DHISWNTMLGGLTQENMF 453
                                                      + +SW  +L G ++   F
Sbjct: 855  EKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNF 914

Query: 454  EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
               +++F  M  E +  +  T+  +    G L  L   K ++++  KN +  D  +ATAL
Sbjct: 915  GNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATAL 974

Query: 514  VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
            VDM+A+ GD Q A ++F  ++ + +++W   I   AM   GE+ + +FN ML  GI+PD+
Sbjct: 975  VDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDA 1034

Query: 574  IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
            I F  VL+ C + GLV +GW  F  M   +GV P I H  CMV+LLGR+G L EA D I+
Sbjct: 1035 ITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIR 1094

Query: 634  SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
            +MP++P+  IWG+ L++C+ H+++++A  A +R+  L+P  S  ++++ N+Y++  +W +
Sbjct: 1095 TMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGD 1154

Query: 694  VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
            V R+R  M    +R     S I+++  VH F +  ++HP+   I   L ++   ++ +GY
Sbjct: 1155 VERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMKKSGY 1214

Query: 754  VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
            +PD   +  +V E EK+ LL  H+EKLAM +GLI      PIRVVKN  LC DCH+ AK 
Sbjct: 1215 MPDTRCIHQNVSESEKEKLLMGHTEKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHTVAKY 1274

Query: 814  VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S + +REI++++  R H FR G CSC++ W
Sbjct: 1275 ISVLRNREIVLQEGARVHHFRDGKCSCNNSW 1305


>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
 gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
 gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 573

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/527 (44%), Positives = 336/527 (63%), Gaps = 7/527 (1%)

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           +++   M  H   PD  T    + +      L  G+  H  +L  GL+    +  ++++M
Sbjct: 47  ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y  CG    A R+FD   +K + +WNS++    K G ++ AR++F EMP R+ ISW+ ++
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166

Query: 445 GGLTQENMFEEAMELFRVMLSER-----IKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
            G      ++EA++LFR M   +     ++ +  TM  V SACG LGAL+  KW++AYI+
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAV 558
           K  +  D+ L TAL+DM+A+CG  +RA +VF  +  K+DV A++A I  +AM G  ++  
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286

Query: 559 ELFNEML-RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +LF+EM     I P+S+ FVG+L AC H GL+N+G   F+ M +  G++P I HYGCMVD
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           L GR+GL+ EA   I SMP+EP+ +IWGSLL+  +   ++     A +R+ ELDP  SG 
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGA 406

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +VLLSN+YA  G+W  V  +R +M+ +GI K+PG S +EV G VHEF  GDES  E   I
Sbjct: 407 YVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERI 466

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
            +ML E+  RLR+AGYV D   VLLD++E++K+  LS+HSEKLA+AF L+ T    P+R+
Sbjct: 467 YAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRI 526

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +KNLR+C DCH   K++SK++ REI+VRD NRFH FR GSCSC DFW
Sbjct: 527 IKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 40/342 (11%)

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           IS+Y+ +    + PD  TFPF+L +         G + H  I+  G D+D FV   L+N 
Sbjct: 47  ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106

Query: 183 YGECGD-------------------------------IVDGRRVFDEMSERNVVSWTSLI 211
           Y  CGD                               I D R++FDEM ERNV+SW+ LI
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166

Query: 212 CACARRDLPKEAVYLFFEMV-----EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
                    KEA+ LF EM      E  ++PN  TM  V+SAC +L  LE G  V AYID
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL-GLAREAL 325
           +  ++ + ++  AL+DMY KCG+++ AK++F     +  V   + M   + + GL  E  
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286

Query: 326 AILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMID 383
            +  EM       P+ VT +  + A    G +  G+     ++   G+         M+D
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346

Query: 384 MYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVES 424
           +Y + G  + A      M     V+ W SL++G    GD+++
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKT 388



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 38/284 (13%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP- 336
           N++V+ Y K G +D A++LF E  +RN++  + +++ YV  G  +EAL +  EM L  P 
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191

Query: 337 ----RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               RP+  TM + +SA  +LG L  G+  H Y+ +  +E    +   +IDMY KCG  E
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251

Query: 393 MACRIFDHM-SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
            A R+F+ + S K V +++++I  L   G  +   ++FSEM   D+I+ N+         
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS--------- 302

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCDMQLA 510
                                VT VG+  AC + G ++  K +    IE+ GI   +Q  
Sbjct: 303 ---------------------VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHY 341

Query: 511 TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
             +VD++ R G  + A      M  + DV  W + +    M G+
Sbjct: 342 GCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 15/222 (6%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA------GFGILPDKF 139
           A+K FD   + N  S     ++ LI GY   G   EA+ L+ E+        F + P++F
Sbjct: 147 ARKLFDEMPERNVIS-----WSCLINGYVMCGKYKEALDLFREMQLPKPNEAF-VRPNEF 200

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   VL+AC +  A  +G  VH  I K   + D+ +   LI+ Y +CG +   +RVF+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260

Query: 200 -SERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLEL 257
            S+++V +++++IC  A   L  E   LF EM   + I PNSVT V ++ AC     +  
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320

Query: 258 GDRVCA-YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           G       I+E G+  +      +VD+Y + G +  A+    
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 362


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 354/591 (59%), Gaps = 6/591 (1%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL--FGECKDRNLVLCNTIMSNYVR 317
           +V A+I   G+   + ++  L+ M  K      +  L  FG+    N  L   ++  Y  
Sbjct: 60  QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYAL 119

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY-VLRNGLEGWDS 376
            GL  E+      M   G  P   T  +   A     ++  G+  H   +L  G      
Sbjct: 120 QGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLY 179

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + N+MID+Y+KCG    A ++FD MS + VVSW  LI    K GD+ESA  +F ++P +D
Sbjct: 180 VGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKD 239

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            ++W  M+ G  Q    +EA+E F+ M    ++ D VT+ GV SAC  LGA+  A WI  
Sbjct: 240 MVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRD 299

Query: 497 YIEKNGI--HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
             E++G     ++ + +AL+DM+++CG P  A +VF  M++R+V ++++ I   AM G  
Sbjct: 300 IAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 359

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
             A++LF++ML+  I+P+ + F+G+L+ACSH GLV QG  LF  M    GV+P   HY C
Sbjct: 360 HSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC 419

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           MVDLLGRAG L EALDL+K+MP+EPN  +WG+LL AC+ H N DIA  AA  + +L+P  
Sbjct: 420 MVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNG 479

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE-VNGKVHEFTSGDESHPE 733
            G ++LLSNIYASAG+W  V+++R  ++E+G +K PG S  E  NG++H+F +GD +HP 
Sbjct: 480 IGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPR 539

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
            + I   L+++  RLR  GY P+L +   D+ + EK+ +L  HSEKLA+A+GL+ T    
Sbjct: 540 SSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGD 599

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            I+++KN+R+C DCH+     S++  REIIVRDN RFH F  G+CSC +FW
Sbjct: 600 TIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 195/396 (49%), Gaps = 55/396 (13%)

Query: 3   LTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGH 62
           L    SP  +  P +     QH+ K       SI  L +C   +++KQ H HI++ GL  
Sbjct: 20  LQTRGSPNFIPFPQL-----QHQRKLLEWRLMSI--LHDCTLFSQIKQVHAHIIRNGLSQ 72

Query: 63  KPSYISKVVCTCAQ----MGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGL 118
               ++K++    +    MG++  L + Q  +             F++ ++IRGY+  GL
Sbjct: 73  CSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY----------PNPFLWTAMIRGYALQGL 122

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG-FDRDVFVEN 177
             E+ + Y  +   G+ P  FTF  +  AC  +     G QVH   + +G F  D++V N
Sbjct: 123 LSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGN 182

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR----------------RDL-- 219
            +I+ Y +CG +   R+VFDEMSER+VVSWT LI A A+                +D+  
Sbjct: 183 SMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVA 242

Query: 220 -------------PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD--RVCAY 264
                        PKEA+  F +M + G++ + VT+  VISACA+L  ++  +  R  A 
Sbjct: 243 WTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAE 302

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
               G   N ++ +AL+DMY KCG+ D A ++F   K+RN+   ++++  Y   G A  A
Sbjct: 303 RSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSA 362

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           L +  +ML    RP++VT +  +SA +  G +  GR
Sbjct: 363 LQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR 398



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 13/233 (5%)

Query: 68  SKVVCTCAQMGTFESLTYAQKAFD-YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLY 126
           ++++   A+ G  ES   A   FD   +KD      +  + +++ GY+  G   EA+  +
Sbjct: 213 TELIVAYAKYGDMES---ASGLFDDLPLKD------MVAWTAMVTGYAQNGRPKEALEYF 263

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF--DRDVFVENCLINFYG 184
            ++   G+  D+ T   V++AC +  A      +     + GF    +V V + LI+ Y 
Sbjct: 264 QKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYS 323

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG   +  +VF+ M ERNV S++S+I   A       A+ LF +M++  I+PN VT + 
Sbjct: 324 KCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIG 383

Query: 245 VISACAKLQNLELGDRVCAYIDE-LGMKANALMVNALVDMYMKCGAVDTAKQL 296
           ++SAC+    +E G ++ A +++  G+  +      +VD+  + G ++ A  L
Sbjct: 384 ILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDL 436



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 9/177 (5%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
            +F Y+S+I GY+  G    A+ L+ ++    I P+K TF  +L+AC+ +    +G Q+ 
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 401

Query: 162 GAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC---AR 216
             + K  G         C+++  G  G + +   +   M  E N   W +L+ AC     
Sbjct: 402 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            D+ + A    F++   GI  N + +  + ++  + + +    +V   I E G K N
Sbjct: 462 PDIAQIAANELFKLEPNGIG-NYILLSNIYASAGRWEEVSKLRKV---IREKGFKKN 514


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/726 (33%), Positives = 397/726 (54%), Gaps = 39/726 (5%)

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
            Q H  I+K G   D ++   LI  Y       D   +   + +  V S++SLI A  + 
Sbjct: 35  TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKA 94

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
            L  +++ +F  M   G+ P++  +  +   CA+L   + G ++       G+  +A + 
Sbjct: 95  KLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQ 154

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
            +L  MYM+CG +  A+++F    ++++V C+ ++  Y R G   E + IL EM   G  
Sbjct: 155 GSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214

Query: 338 P-----------------------------------DRVTMLSAVSASAQLGDLLCGRMC 362
           P                                   D+VT+ S + +     +L  GR  
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQI 274

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           HGYV++ GL     + + M+DMY K G      ++FD          N+ I GL +NG V
Sbjct: 275 HGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334

Query: 423 ESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           + A E+F     +    + +SW +++ G  Q     EA+ELFR M    +K +RVT+  +
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSM 394

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             ACG + AL   +  + +  +  +  D+ + +AL+DM+A+CG  + +  VF  M  +++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNL 454

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
             W + +   +M G  ++ + +F  ++R  +KPD I F  +L+AC   GL ++GW  F  
Sbjct: 455 VCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNM 514

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M++ +G+ P++ HY CMV+LLGRAG L EA DLIK +P EP+  +WG+LL +C+   NVD
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVD 574

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +A  AA+++  L+PE  G +VL+SNIYA+ G WT V  +R +M+  G++K PG S I+V 
Sbjct: 575 LAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
            KV+   + D+SHP+++ I+  + E++  +R +G+ P+L   L DV+EQE++ +L  HSE
Sbjct: 635 NKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSE 694

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLA+ FGL++T    P++V+KNLR+C DCH+  K +S    REI +RD NRFH F+ G C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754

Query: 839 SCSDFW 844
           SC DFW
Sbjct: 755 SCGDFW 760



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 253/581 (43%), Gaps = 113/581 (19%)

Query: 50  QPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           Q H  ILK G      YIS K++ + +    F       ++            T++ ++S
Sbjct: 36  QAHARILKSG-AQNDGYISAKLIASYSNYNCFNDADLILQSI--------PDPTVYSFSS 86

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI   +   L  ++I ++  +   G++PD    P +   C + SAF  G Q+H      G
Sbjct: 87  LIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSG 146

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            D D FV+  L + Y  CG + D R+VFD MSE++VV+ ++L+C  AR+   +E V +  
Sbjct: 147 LDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILS 206

Query: 229 EMVEEGIKPN-----------------------------------SVTMVCVISACAKLQ 253
           EM + GI+PN                                    VT+  V+ +    +
Sbjct: 207 EMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSE 266

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKC-------------------------- 287
           NL +G ++  Y+ + G+  +  +++A++DMY K                           
Sbjct: 267 NLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYIT 326

Query: 288 -----GAVDTAKQLFGECKDR----NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
                G VD A ++FG  K++    N+V   +I++   + G   EAL +  EM + G +P
Sbjct: 327 GLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +RVT+ S + A   +  L  GR  HG+ +R  L     + + +IDMY KCG+ +M+  +F
Sbjct: 387 NRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVF 446

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           + M  K +V WNSL+ G   +G                                 +E M 
Sbjct: 447 NMMPTKNLVCWNSLMNGYSMHGKA-------------------------------KEVMS 475

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMF 517
           +F  ++  R+K D ++   + SACG +G  D   K+     E+ GI   ++  + +V++ 
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLL 535

Query: 518 ARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
            R G  Q A  + + +  + D   W A + +  ++ N + A
Sbjct: 536 GRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLA 576



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 37/297 (12%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMG----------TFESL 83
           PS+G  +N   LN  +Q H +++KQGL      IS ++    + G           FE +
Sbjct: 260 PSVGDSEN---LNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMM 316

Query: 84  T---------------YAQKAFDYY--IKDNETSATLFMYNSLIRGYSCIGLGVEAISLY 126
                              KA + +   K+ +    +  + S+I G +  G  +EA+ L+
Sbjct: 317 ETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELF 376

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
            E+   G+ P++ T P +L AC   +A G G   HG  V++    DV V + LI+ Y +C
Sbjct: 377 REMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKC 436

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G I   + VF+ M  +N+V W SL+   +     KE + +F  ++   +KP+ ++   ++
Sbjct: 437 GRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLL 496

Query: 247 SACAKLQNLELGDRVCAYI----DELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           SAC ++    L D    Y     +E G+K      + +V++  + G +  A  L  E
Sbjct: 497 SACGQVG---LTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/686 (34%), Positives = 380/686 (55%), Gaps = 31/686 (4%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+H +++      D F+ N L+              +F      N+  + SLI       
Sbjct: 31  QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           L  E + LF  + + G+  +  T   V+ AC +  + +LG  + + + + G   +   + 
Sbjct: 91  LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L+ +Y   G ++ A +LF E  DR++V    + S Y   G  REA+ +  +M+  G +P
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D   ++  +SA   +GDL  G     Y+    ++    +  T++++Y KCGK        
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK-------- 262

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                                  +E AR VF  M  +D ++W+TM+ G    +  +E +E
Sbjct: 263 -----------------------MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF  ML E +K D+ ++VG  S+C  LGALDL +W  + I+++    ++ +A AL+DM+A
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG   R  +VF+ M+++D+    AAI  +A  G+ + +  +F +  + GI PD   F+G
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L  C H GL+  G   F +++ ++ +   + HYGCMVDL GRAG+L +A  LI  MP+ 
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           PN ++WG+LL+ C+  ++  +A    + +  L+P  +G +V LSNIY+  G+W   A VR
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
             M ++G++K+PG S IE+ GKVHEF + D+SHP  + I + L ++   +R  G+VP   
Sbjct: 540 DMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTE 599

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            V  DV+E+EK+ +L +HSEKLA+A GLIST     IRVVKNLR+C DCH   KL+SK+ 
Sbjct: 600 FVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKIT 659

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            REI+VRDNNRFH F  GSCSC+D+W
Sbjct: 660 RREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 228/444 (51%), Gaps = 16/444 (3%)

Query: 28  TTPKDSPSIGSLKNCK----TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
           T P  +  +  +K       T+N LKQ H  ++   L H    ++ ++          +L
Sbjct: 5   TVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLK--------RTL 56

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
            + Q  + Y +  +     +F+YNSLI G+    L  E + L++ +   G+    FTFP 
Sbjct: 57  FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 116

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL ACT++S+   G+ +H  +VK GF+ DV     L++ Y   G + D  ++FDE+ +R+
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VV+WT+L          +EA+ LF +MVE G+KP+S  +V V+SAC  + +L+ G+ +  
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y++E+ M+ N+ +   LV++Y KCG ++ A+ +F    ++++V  +T++  Y      +E
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            + +  +ML    +PD+ +++  +S+ A LG L  G      + R+       + N +ID
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP----GRDHIS 439
           MY KCG       +F  M  K +V  N+ I+GL KNG V+ +  VF +        D  +
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416

Query: 440 WNTMLGGLTQENMFEEAMELFRVM 463
           +  +L G     + ++ +  F  +
Sbjct: 417 FLGLLCGCVHAGLIQDGLRFFNAI 440



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 200/449 (44%), Gaps = 47/449 (10%)

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELG----------MKANALMVNALVDMYMKCGA 289
           +++V V SA +K+Q ++    V   ++ L           +  +  +VN L+   +    
Sbjct: 1   MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
              +  LF   +  N+ L N++++ +V   L  E L +   +  HG      T    + A
Sbjct: 61  TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
             +      G   H  V+                   KCG        F+H     V + 
Sbjct: 121 CTRASSRKLGIDLHSLVV-------------------KCG--------FNH----DVAAM 149

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            SL++    +G +  A ++F E+P R  ++W  +  G T      EA++LF+ M+   +K
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D   +V V SAC ++G LD  +WI  Y+E+  +  +  + T LV+++A+CG  ++A  V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M ++D+  W+  I   A     ++ +ELF +ML++ +KPD    VG L++C+  G +
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 590 NQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + G W +  S+ D H     +     ++D+  + G +    ++ K M  E + VI  + +
Sbjct: 330 DLGEWGI--SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAI 386

Query: 649 AACQK--HQNVDIAAYAAERITELDPEKS 675
           +   K  H  +  A +       + P+ S
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGS 415


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/679 (36%), Positives = 376/679 (55%), Gaps = 48/679 (7%)

Query: 179 LINFYGECGDIVDGRRVFDEMSER--------NVVSWTSLICACARRDLPKEAVYLFFEM 230
           LI  Y + GD+   R +FD             N     +++ A A      EA+ L+  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
              G+  N+ T   V+  CA       G+ V   +   G  ++  +  ALVDMY KCG +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
             A ++F     R++V    +++ Y +     +AL +  +M   G   D +T +S  SA 
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243

Query: 351 AQLGDLLCGRMC---HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            QLGD   GRM    HGY + NG  G  S+ N+++ MY KCG                  
Sbjct: 244 GQLGD---GRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCG------------------ 282

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                        +VE AR VF  M  R+ ISWN+ML G TQ     +A+ LF  M +  
Sbjct: 283 -------------NVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASE 329

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
              + VT + + SAC YLG+  L + ++ ++  + +  D  L  A++DM+ +CGD   A+
Sbjct: 330 CDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAV 389

Query: 528 QVFRRME--KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           ++F   E  +RDVS+W   I    + G+G++A+ELF+ M  +G++P+ I F  +L+ACSH
Sbjct: 390 EMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSH 449

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GL+++G   F  MT +  V P++ HY CMVD+LGRAG L EA  LIK +P  P+D +WG
Sbjct: 450 AGLIDEGRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWG 508

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC+ H N ++   AA  + +L+PE +G +VL+SNIYA++ KW  V  VR  MK +G
Sbjct: 509 ALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRG 568

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K    S IE   +VH F + D+S P    +   +  +   ++  GYVPDL+ VL DV+
Sbjct: 569 LKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVE 628

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
            ++K++LL++HSEKLA+AFG++   + MPI+V KNLR+C DCH   K +S +Y R+IIVR
Sbjct: 629 PEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVR 688

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH F+ G CSC D+W
Sbjct: 689 DGNRFHHFQGGRCSCGDYW 707



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/554 (29%), Positives = 277/554 (50%), Gaps = 46/554 (8%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHCHILKQG-LGHKPSYISK 69
           L +  +  L++ HK    P        L + C +L  LK  H  +  +G L H P ++++
Sbjct: 4   LKSRALHHLSHTHKVLALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLAR 63

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDN---ETSATLFMYNSLIRGYSCIGLGVEAISLY 126
           ++   +++G   S   A+  FD+    +     +   F+ N+++R Y+  G   EAI LY
Sbjct: 64  LIILYSKLGDLHS---ARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLY 120

Query: 127 VELAGFGILPDKFTFPFVLNACTKS--SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           + +   G+  + FT+PFVL  C     + FGE   VHG +V+ GF  D+FVE  L++ Y 
Sbjct: 121 IYMQRMGVGVNNFTYPFVLKVCASELGAVFGE--VVHGQVVRTGFGSDLFVEAALVDMYA 178

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG+I D   VFD M  R+VV WT++I    + + P +A+ LF +M EEG   + +T + 
Sbjct: 179 KCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAIS 238

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V SA  +L +  +   V  Y    G   +  + N++V MY KCG V+ A+ +F   ++RN
Sbjct: 239 VASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERN 298

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
            +  N+++S Y + G   +AL++ ++M      P+ VT L  VSA + LG    GR  H 
Sbjct: 299 GISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHN 358

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDV 422
           +V+ + ++   ++ N ++DMYMKCG  + A  +F++  +  + V SWN LI+G   +G  
Sbjct: 359 FVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGH- 417

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                      G++                   A+ELF  M  E ++ + +T   + SAC
Sbjct: 418 -----------GKE-------------------ALELFSRMQVEGVEPNDITFTSILSAC 447

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV-SAW 541
            + G +D  +  +A + K  +  +M+    +VDM  R G    A ++ +++  R     W
Sbjct: 448 SHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVW 507

Query: 542 TAAIGAMAMEGNGE 555
            A + A  + GN E
Sbjct: 508 GALLLACRIHGNTE 521


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 266/774 (34%), Positives = 413/774 (53%), Gaps = 95/774 (12%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G   D FT P VL AC +  ++  G   HG I   GF+ +VF+ N L+  Y  CG + + 
Sbjct: 5   GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 64

Query: 193 RRVFDEMSER---NVVSWTSLICACARRDLPKEAVYLFFEM---VEEGIKPNS-----VT 241
             +FDE+++R   +V+SW S++ A  +      A+ LF +M   V E  KP +     ++
Sbjct: 65  SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE--KPTNERSDIIS 122

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--E 299
           +V ++ AC  L+ +     V       G   +  + NAL+D Y KCG ++ A ++F   E
Sbjct: 123 IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 182

Query: 300 CKD---------------------------------RNLVLCNTIMSNYVRLGLAREALA 326
            KD                                  ++V    +++ Y + G + EAL 
Sbjct: 183 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 242

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS---------- 376
           +  +M+  G  P+ VT++S +SA A LG    G   H Y L+N L   D+          
Sbjct: 243 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 302

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP--G 434
           + N +IDMY KC       R F                        ++AR +F ++P   
Sbjct: 303 VYNALIDMYSKC-------RSF------------------------KAARSIFDDIPLEE 331

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV--DRVTMVGVASACGYLGALDLAK 492
           R+ ++W  M+GG  Q     +A++LF  M+SE   V  +  T+  +  AC +L A+ + K
Sbjct: 332 RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGK 391

Query: 493 WIYAYIEKNGIHCDMQ--LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            I+AY+ ++  +      +A  L++M+++CGD   A  VF  M ++   +WT+ +    M
Sbjct: 392 QIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM 451

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G G +A+++F++M + G  PD I F+ VL ACSH G+V+QG   F SM+  +G++P+  
Sbjct: 452 HGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAE 511

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           HY   +DLL R G L +A   +K MP+EP  V+W +LL+AC+ H NV++A +A  ++ E+
Sbjct: 512 HYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 571

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           + E  G + L+SNIYA+AG+W +VAR+R  MK+ GI+K PG S ++       F  GD S
Sbjct: 572 NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRS 631

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           HP    I ++L  +  R++  GYVP+    L DVDE+EK  LL  HSEKLA+A+GL++T 
Sbjct: 632 HPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTF 691

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              PIR+ KNLR+C DCHS    +SK+ D EI+VRD +RFH F+ GSCSC  +W
Sbjct: 692 PGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 223/453 (49%), Gaps = 29/453 (6%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+  G + +  T+  V+ AC +L +   G      I   G ++N  + NALV MY +CG+
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 290 VDTAKQLFGECKDR---NLVLCNTIMSNYVRLGLAREALAILDEMLL------HGPRPDR 340
           ++ A  +F E   R   +++  N+I+S +V+   A  AL +  +M L         R D 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           +++++ + A   L  +   +  HG  +RNG      + N +ID Y KCG  E A ++F+ 
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEA 456
           M  K VVSWN+++AG  ++G+ ++A E+F  M       D ++W  ++ G +Q     EA
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN----------GIHCD 506
           + +FR M+      + VT++ V SAC  LGA      I+AY  KN          G   D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 507 MQLATALVDMFARCGDPQRAMQVFRR--MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
           + +  AL+DM+++C   + A  +F    +E+R+V  WT  IG  A  G+   A++LF EM
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 565 LRQ--GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV-SPQIVHYGCMVDLLGR 621
           + +  G+ P++     +L AC+H   +  G  +   +   H   S       C++++  +
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            G +  A  +  SM  + + + W S++     H
Sbjct: 421 CGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 452



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 189/389 (48%), Gaps = 48/389 (12%)

Query: 75  AQMGTFESLTYAQKAFDYY--IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
           +Q G F++      AF+ +  ++       +  + ++I GYS  G   EA++++ ++   
Sbjct: 197 SQSGNFKA------AFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 250

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM----------GFDRDVFVENCLINF 182
           G LP+  T   VL+AC    AF +G+++H   +K           G D D+ V N LI+ 
Sbjct: 251 GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 310

Query: 183 YGECGDIVDGRRVFDE--MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE--GIKPN 238
           Y +C      R +FD+  + ERNVV+WT +I   A+     +A+ LF EM+ E  G+ PN
Sbjct: 311 YSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 370

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMV-NALVDMYMKCGAVDTAKQL 296
           + T+ C++ ACA L  + +G ++ AY+       ++A  V N L++MY KCG VDTA+ +
Sbjct: 371 AYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHV 430

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F     ++ +   ++M+ Y   G   EAL I D+M   G  PD +T L  + A +  G  
Sbjct: 431 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG-- 488

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTM------------IDMYMKCGKQEMACRIFDHMS-N 403
                    ++  GL  +DS+                ID+  + G+ + A +    M   
Sbjct: 489 ---------MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPME 539

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            T V W +L++    + +VE A    +++
Sbjct: 540 PTAVVWVALLSACRVHSNVELAEHALNKL 568


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/752 (34%), Positives = 398/752 (52%), Gaps = 35/752 (4%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTK 150
           +Y+    +   LF +N L+ GY+  G   EA+ LY  +   G + PD +TFP VL  C  
Sbjct: 149 WYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGG 208

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
                 G +VH  +V+ G++ D+ V N LI  Y +CGD+   R +FD M  R+++SW ++
Sbjct: 209 IPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I       +  E + LFF M    + P+ +T+  VISAC  L +  LG  + AY+   G 
Sbjct: 269 ISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF 328

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             +  + N+L  MY+  G+   A++LF   + +++V   T++S Y    L  +A+     
Sbjct: 329 AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRM 388

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M     +PD +T+ + +SA A LGDL  G   H   ++  L  +  + N +I+MY KC  
Sbjct: 389 MDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC-- 446

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
               C                          ++ A ++F  +P ++ ISW +++ GL   
Sbjct: 447 ---KC--------------------------IDKALDIFHNIPRKNVISWTSIIAGLRLN 477

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
           N   EA+   R M    ++ + +T+    +AC  +GAL   K I+A++ + G+  D  L 
Sbjct: 478 NRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP 536

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            AL+DM+ RCG    A   F   +K+DV++W   +   +  G G   VELF+ M++  ++
Sbjct: 537 NALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVR 595

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD I F+ +L  CS   +V QG   F  M D +GV+P + HY C+VDLLGRAG L EA  
Sbjct: 596 PDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHK 654

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            I+ MPV P+  +WG+LL AC+ H  +D+   +A+ I ELD +  G ++LL N+YA  GK
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGK 714

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W  VA+VR  MKE G+    G S +EV GKVH F S D+ HP+   I+++L     ++ +
Sbjct: 715 WREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE 774

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            G      +  +D  E  +  +   HSE+ A+AFGLI+T   MPI V KNL +C +CH  
Sbjct: 775 VGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDT 834

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
            K +SK   REI VRD   FH F+ G CSC D
Sbjct: 835 VKFISKTVRREISVRDAEHFHHFKDGECSCGD 866



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/573 (25%), Positives = 253/573 (44%), Gaps = 71/573 (12%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           EA+ L   +    +  D+  F  ++  C    A  EG +V+   +       V + N  +
Sbjct: 77  EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNS 239
             +   G++VD   VF +MSERN+ SW  L+   A++    EA+ L+  M+   G+KP+ 
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            T  CV+  C  + +L  G  V  ++   G + +  +VNAL+ MY+KCG V +A+ LF  
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              R+++  N ++S Y   G+  E L +   M      PD +T+ S +SA   LGD   G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R  H YV+  G     S+CN++  MY+  G    A ++F  M  K +VSW ++I+G    
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY--- 373

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
                    ++ +P                    ++A++ +R+M  + +K D +T+  V 
Sbjct: 374 --------EYNFLP--------------------DKAIDTYRMMDQDSVKPDEITVAAVL 405

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           SAC  LG LD    ++    K  +   + +A  L++M+++C    +A+ +F  + +++V 
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI 465

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEM----------------------------------L 565
           +WT+ I  + +     +A+    +M                                  L
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVL 525

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM-TDIHGVSPQIVHYGCMVDLLGRAGL 624
           R G+  D  +   +L      G +N  W  F S   D+   +  +  Y       G+  +
Sbjct: 526 RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTSWNILLTGYS----ERGQGSM 581

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           + E  D +    V P+++ + SLL  C K Q V
Sbjct: 582 VVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 115/285 (40%), Gaps = 7/285 (2%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           L    + T     +    P +      L  C TL +L      +    L  K   IS V+
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG---VELHKLAIKARLISYVI 434

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
                +  +       KA D +   N     +  + S+I G        EA+ +++    
Sbjct: 435 VANNLINMYSKCKCIDKALDIF--HNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 491

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
             + P+  T    L AC +  A   G ++H  +++ G   D F+ N L++ Y  CG +  
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
               F+   +++V SW  L+   + R      V LF  MV+  ++P+ +T + ++  C+K
Sbjct: 552 AWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            Q +  G    + +++ G+  N      +VD+  + G +  A + 
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKF 655



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 33/270 (12%)

Query: 49  KQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           K+ H H+L+ G+G     P+ +  +   C +M T  S   +QK      KD  +      
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK------KDVTS------ 565

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N L+ GYS  G G   + L+  +    + PD+ TF  +L  C+KS    +G+     + 
Sbjct: 566 WNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME 625

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACA---RRDLPK 221
             G   ++    C+++  G  G++ +  +   +M    +   W +L+ AC    + DL +
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 685

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISA-CAKLQNLELGDRVCAYIDELGMKANALMVNA- 279
            +    FE+ ++ +      ++C + A C K + +    R+        MK N L V+A 
Sbjct: 686 LSAQHIFELDKKSV--GYYILLCNLYADCGKWREVAKVRRM--------MKENGLTVDAG 735

Query: 280 --LVDMYMKCGAVDTAKQLFGECKDRNLVL 307
              V++  K  A  +  +   + K+ N VL
Sbjct: 736 CSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 287/861 (33%), Positives = 441/861 (51%), Gaps = 111/861 (12%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           S + CKTL + K  H   +  G  H  +  + V        +  S+T A    +  +  +
Sbjct: 30  SKQQCKTLTQAKLLHQQYIING--HLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPS 87

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
            +S  ++ +N LIR          A+ L+  +      PD +TFPFV  AC + S F  G
Sbjct: 88  HSS--VYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELG 145

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV---VSWTSLICAC 214
             +HG ++++GF+ +VFV N +I+ YG+C  +V  R+VFDE+  R +   V+W S++   
Sbjct: 146 ASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVY 205

Query: 215 ARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           +   +P  AV LF EM V  GI P++V +V ++  C  L     G +V  +    G+  +
Sbjct: 206 SHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVED 265

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN------------------------ 309
             + NALVDMY KCG ++ A ++F   + +++V  N                        
Sbjct: 266 VFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMRE 325

Query: 310 -----------TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
                      +++S Y + G   EA+ +  +M     RP+ VT++S +SA A +G LL 
Sbjct: 326 EKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLH 385

Query: 359 GRMCHGYVLRNGLEGWD-------SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
           G+  H Y ++  L+G         ++ N +IDMY KC   E+A  +FD +  K       
Sbjct: 386 GKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKD------ 439

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
                                  RD ++W  M+GG  Q      A++LF    SE  K+D
Sbjct: 440 -----------------------RDVVTWTVMIGGYAQHGDANHALQLF----SEMFKID 472

Query: 472 R------VTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCD-MQLATALVDMFARCGDP 523
                   T+  V  AC  L AL   K I+AY+  ++ I  D + +A  L+DM+++ GD 
Sbjct: 473 NCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDV 532

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A  VF  M KR+  +WT+ +    M G  E A  +F+EM ++ +  D I F+ VL AC
Sbjct: 533 DTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYAC 592

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SH G+               GV P + HY CMVDLLGRAG LGEA+ LI  MP+EP  V+
Sbjct: 593 SHSGM-------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVV 639

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           W +LL+AC+ H N ++A +AA+++ EL  +  G + LLSNIYA+A +W +VAR+   MK 
Sbjct: 640 WIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKR 699

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
            GI+K+PG S ++    +  F  GD +H +   I   L ++  R++ A +       L D
Sbjct: 700 TGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIK-ANF------SLHD 752

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           VD++EK   LS HSEKLA+A+ +++     PIR+ KNLR+C D HS    +S + + EII
Sbjct: 753 VDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEII 812

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           +RD++RFH F+ GSCSC  +W
Sbjct: 813 LRDSSRFHQFKNGSCSCKGYW 833


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/592 (39%), Positives = 347/592 (58%), Gaps = 33/592 (5%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF------GECKDRNLVLCNTIMS 313
           ++ + I +LG+  N L++           AV  A  +             +  L NT++ 
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 314 NYVRLGLAR-EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
            + +   ++  AL   + M  H   P++ T    + A A +  L  G   H  +++ G E
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + NT++ MY  C +                            +G V SA++VF E 
Sbjct: 260 EDPHVRNTLVHMYCCCCQDG-------------------------SSGPV-SAKKVFDES 293

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           P +D ++W+ M+GG  +      A+ LFR M    +  D +TMV V SAC  LGAL+L K
Sbjct: 294 PVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGK 353

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
           W+ +YIE+  I   ++L  AL+DMFA+CGD  RA++VFR M+ R + +WT+ I  +AM G
Sbjct: 354 WLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHG 413

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G +AV +F+EM+ QG+ PD + F+GVL+ACSH GLV++G + F +M ++  + P+I HY
Sbjct: 414 RGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHY 473

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GCMVD+L RAG + EAL+ +++MPVEPN VIW S++ AC     + +    A+ +   +P
Sbjct: 474 GCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREP 533

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
                +VLLSNIYA   +W    +VR  M  +G+RK+PGS+ IE+N +++EF +GD+SH 
Sbjct: 534 SHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHD 593

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           +   I  M+ EM   ++ AGYVP  + VLLD+DE++K+  L  HSEKLA+AF L+ST   
Sbjct: 594 QYKEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPG 653

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PIR+VKNLR+C DCHS  K +SKVY+REI+VRD NRFH F+ G CSC DFW
Sbjct: 654 TPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 194/404 (48%), Gaps = 28/404 (6%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET---SATLFMY 106
           Q H  ILK GL H P  ++K   T +    F ++ YA      +  D  T   S   F++
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSH---FNAVHYASSVL--FPNDQTTPPPSHDAFLF 194

Query: 107 NSLIRGYS-CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           N+LIR ++        A+  Y  +    + P+KFTFPFVL AC        G  VH ++V
Sbjct: 195 NTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMV 254

Query: 166 KMGFDRDVFVENCLINFY------GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           K GF+ D  V N L++ Y      G  G  V  ++VFDE   ++ V+W+++I   AR   
Sbjct: 255 KFGFEEDPHVRNTLVHMYCCCCQDGSSGP-VSAKKVFDESPVKDSVTWSAMIGGYARAGN 313

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
              AV LF EM   G+ P+ +TMV V+SACA L  LELG  + +YI+   +  +  + NA
Sbjct: 314 SARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNA 373

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+DM+ KCG VD A ++F E K R +V   +++      G   EA+ + DEM+  G  PD
Sbjct: 374 LIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPD 433

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT------MIDMYMKCGKQEM 393
            V  +  +SA +       G +  G+   N +E   SI         M+DM  + G+   
Sbjct: 434 DVAFIGVLSACSH-----SGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNE 488

Query: 394 ACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           A      M      V W S++      G+++    V  E+  R+
Sbjct: 489 ALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRRE 532


>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
 gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
          Length = 654

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/553 (42%), Positives = 338/553 (61%), Gaps = 4/553 (0%)

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F +    N  L N ++  Y+     +E+      M   G  P   T  +   A     D
Sbjct: 102 IFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMD 161

Query: 356 LLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           +  GR  HG  +  G  G D  + N+MIDMY+KCG  E   ++FD M N+ V+SW  LI+
Sbjct: 162 VGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELIS 221

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
             +K+G++ESA E+F  +P +D ++W  M+ G  Q     EA+  F  M    ++ D +T
Sbjct: 222 AYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEIT 281

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           ++GV SAC  LGA   A WI    EK+  G    + + +AL+DM+++CG    A +VF+ 
Sbjct: 282 LIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQG 341

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M++R+V ++++ I   AM G    A++LF+EM++  IKP+ + F+GVLTACSH G+V QG
Sbjct: 342 MKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQG 401

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
           W +F  M   +G+ P   HY CMVDLLGRAG L EA +L+K+MP+EP+  +WG+LL AC+
Sbjct: 402 WQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACR 461

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H++ DIAA AA  + EL+P   G ++LL+NIYAS G+W +V+ VR  M+ +G+RK P  
Sbjct: 462 IHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAF 521

Query: 713 SSIEV-NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
           S IE   G VHEF SGD +HP    I   L ++  RL   GY P L++V  DV++++K+ 
Sbjct: 522 SWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRR 581

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
           +L  HSEKLA+AFGLIST     IR+VKNLR+C DCHS     S++  REIIVRD  RFH
Sbjct: 582 ILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFH 641

Query: 832 FFRQGSCSCSDFW 844
            F  G CSC +FW
Sbjct: 642 HFHDGICSCGNFW 654



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 210/451 (46%), Gaps = 73/451 (16%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           +S  + +L  CK L ++KQ H  IL  GL      ++K++ T  +      L      + 
Sbjct: 46  ESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTK------LNIPVDPYP 99

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
             I +       F+YN+LIRGY       E+   Y  +   G++P  FTF  +  AC   
Sbjct: 100 LSIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAK 159

Query: 152 SAFGEGVQVHG-AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
              G G Q+HG  I+  GF  D+ V N +I+ Y +CG +  GR+VFDEM  R+V+SWT L
Sbjct: 160 MDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTEL 219

Query: 211 ICACAR----------------RDL---------------PKEAVYLFFEMVEEGIKPNS 239
           I A  +                +D+               P+EA+  F +M E G++ + 
Sbjct: 220 ISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDE 279

Query: 240 VTMVCVISACAKLQNLELGD--RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +T++ VISACA+L   +  D  R  A   E G K + ++ +AL+DMY KCG+V  A ++F
Sbjct: 280 ITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVF 339

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
              K+RN+   ++++  +   G   +A+ + DEM+    +P+RVT +  ++A +  G + 
Sbjct: 340 QGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMV- 398

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKC-GKQEMACRIFDHMSNKTVVSWNSLIAGL 416
                         +GW      + ++  KC G +  A    DH        +  ++  L
Sbjct: 399 -------------EQGWQ-----IFELMEKCYGIKPSA----DH--------YTCMVDLL 428

Query: 417 IKNGDVESAREVFSEMPGRDHIS-WNTMLGG 446
            + G ++ A E+   MP   H   W  +LG 
Sbjct: 429 GRAGRLQEAHELVKTMPIEPHGGVWGALLGA 459


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/822 (33%), Positives = 420/822 (51%), Gaps = 51/822 (6%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           D+  +  L++C         H HI++          + ++    ++G      +A++  D
Sbjct: 17  DAYYLHHLRSCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG-----HARRLLD 71

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTK 150
              + N  S     +N LI  YS  G    ++  +       G+  D+FT+   L AC++
Sbjct: 72  EMPRTNAVS-----FNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSR 126

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           +    EG  VH   V  G    VFV N L++ Y  CGD+   R+VFD   ER+ VSW +L
Sbjct: 127 AGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNAL 186

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN--LELGDRVCAYIDEL 268
           +    R     + + +F  M   GI  NS  +  VI  CA   +  +++   V   + + 
Sbjct: 187 VSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKA 246

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA------R 322
           G  ++  + +A+V MY K GA+  A  LF    D N+V+ N +++   R   A      R
Sbjct: 247 GFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLR 306

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL++  E+   G  P   T  S + A    GD+  G+  HG VL++  +G D I + +I
Sbjct: 307 EALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALI 366

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           D+Y+  G  E   R                                F+ +P +D ++W  
Sbjct: 367 DLYLNSGCMEDGFR-------------------------------CFTSVPKQDVVTWTA 395

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           M+ G  Q  +FE A+ LF  +L   +K D  T+  V +AC  L      + I  +  K+G
Sbjct: 396 MISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSG 455

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
                 +  + + M+AR GD   A++ F+ ME  D+ +W+A I + A  G    A+  FN
Sbjct: 456 FGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFN 515

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           EM+   + P+ I F+GVLTACSHGGLV++G   + +M + + +SP I H  C+VDLLGRA
Sbjct: 516 EMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRA 575

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G L +A   I+        VIW SLLA+C+ H++++     A+RI EL P  S  +V L 
Sbjct: 576 GRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLY 635

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           NIY  AG+ +  +++R  MKE+G++K PG S IE+   VH F +GD+SHPE N I S L 
Sbjct: 636 NIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLA 695

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           EM  ++ D     D ++   D   + ++  ++ HSEKLA+A GLI   ++ PIRV+KNLR
Sbjct: 696 EMLSKI-DKLTATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQSAPIRVMKNLR 754

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH   KL+SK   REI++RD  RFH FR GSCSC+D+W
Sbjct: 755 VCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/576 (40%), Positives = 347/576 (60%), Gaps = 4/576 (0%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G+  N ++   L   Y   G +D +  +F    + N+   + I+ ++V+  L   A    
Sbjct: 74  GLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYY 133

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +ML  G  P+  T  S + + +    L  G++ H   ++ GL     +   ++D+Y + 
Sbjct: 134 SQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARG 189

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G    A ++FD M  +++VS  +++    K G+++ AR +F  M  RD + WN M+GG  
Sbjct: 190 GDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYA 249

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           Q  +  E+++LFR ML  +   + VT++ V SACG LGAL+  +WI++YIE  GI  ++ 
Sbjct: 250 QSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVH 309

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           + TAL+DM+++CG  + A  VF R+  +DV AW + I   AM G  + A++LF EM   G
Sbjct: 310 VGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETG 369

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
            KP  I F+G+L+AC HGGLV +G   FR M D +G+ P+I HYGCMV+LLGRAG L EA
Sbjct: 370 HKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEA 429

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
             L+K+M +  + V+WG+LL  C+ H N+ +    A+ + +     SG +VLLSN+YA+ 
Sbjct: 430 YGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAAT 489

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
           G W  VA++R  MKE GI K  G SSIEV+ KVHEF +G+  HP+   I  ML E+N  L
Sbjct: 490 GNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWL 549

Query: 749 RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
           +  GY P    VL D+ E++K+  L  HSEKLA+AFGLIST     +++VKNLR+C DCH
Sbjct: 550 KARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCH 609

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  K++S++  R+I++RD NRFH F  G CSC D+W
Sbjct: 610 TVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 172/353 (48%), Gaps = 43/353 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +   K++  L Q H  +L++GL H P    K+  + A +G  +   +    FD       
Sbjct: 54  IDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD------- 106

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
               +F ++++I  +    L   A   Y ++   G+ P+ FTF  VL +C+  S    G 
Sbjct: 107 -EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES----GK 161

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS------------ 206
            +H   +K+G   D++V   L++ Y   GD+V  R++FD+M ER++VS            
Sbjct: 162 VLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMG 221

Query: 207 -------------------WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                              W  +I   A+  +P E++ LF  M+     PN VT++ V+S
Sbjct: 222 ELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLS 281

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC +L  LE G  + +YI+  G++ N  +  AL+DMY KCG+++ A+ +F   +D+++V 
Sbjct: 282 ACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVA 341

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            N+++  Y   G ++ AL + +EM   G +P  +T +  +SA    G +  GR
Sbjct: 342 WNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGR 394



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 216/499 (43%), Gaps = 75/499 (15%)

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
           KS +    +Q+H ++++ G   +  +   L   Y   G +     VF+   E NV S+++
Sbjct: 56  KSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSA 115

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I +  +  L   A   + +M+  G++PN+ T   V+ +C+    LE G  +     +LG
Sbjct: 116 IIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLG 171

Query: 270 MKANALMVNALVDMYM-------------------------------KCGAVDTAKQLFG 298
           + ++  +   LVD+Y                                K G +D A+ LF 
Sbjct: 172 LGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFE 231

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
             K+R++V  N ++  Y + G+  E+L +   ML+    P+ VT+L+ +SA  QLG L  
Sbjct: 232 GMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALES 291

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           GR  H Y+   G++    +   +IDMY KCG  E A  +FD + +K VV+WNS+I G   
Sbjct: 292 GRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAM 351

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           +G  + A ++F EM    H                               K   +T +G+
Sbjct: 352 HGFSQHALQLFEEMTETGH-------------------------------KPTDITFIGI 380

Query: 479 ASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KR 536
            SACG+ G ++  +  +  + +K GI   ++    +V++  R G  + A  + + M    
Sbjct: 381 LSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAA 440

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN-QGWHL 595
           D   W   +G   +  N +   E+   ++ Q +         VL +  +    N +G   
Sbjct: 441 DPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTY---VLLSNMYAATGNWEGVAK 497

Query: 596 FRSMTDIHGVSPQIVHYGC 614
            R++   HG+  +   +GC
Sbjct: 498 MRTLMKEHGIEKE---HGC 513



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 31/285 (10%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           LK+C +L   K  HC  +K GLG      + +V   A+ G    +  A++ FD   + + 
Sbjct: 152 LKSC-SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGG---DVVCARQLFDKMPERSL 207

Query: 99  TSATLFM--------------------------YNSLIRGYSCIGLGVEAISLYVELAGF 132
            S T  +                          +N +I GY+  G+  E++ L+  +   
Sbjct: 208 VSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVA 267

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
             +P++ T   VL+AC +  A   G  +H  I   G   +V V   LI+ Y +CG + D 
Sbjct: 268 KAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDA 327

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R VFD + +++VV+W S+I   A     + A+ LF EM E G KP  +T + ++SAC   
Sbjct: 328 RLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHG 387

Query: 253 QNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQL 296
             +E G      + D+ G++        +V++  + G ++ A  L
Sbjct: 388 GLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGL 432


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/895 (30%), Positives = 445/895 (49%), Gaps = 88/895 (9%)

Query: 28  TTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYIS---KVVCTCAQMGTFESLT 84
           + PK SP        +TLN +++ H  I+K  +  K + ++    ++    Q G FES  
Sbjct: 27  SPPKFSPFFHPFGEIRTLNSVRELHAQIIK--MPKKRNLVTMDGSMMRNYLQFGDFES-- 82

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV-EAISLYVELAGFGILPDKFTFPF 143
            A K F      N       ++NS I  ++  G    E ++++ EL   G+  D      
Sbjct: 83  -ATKVFFVGFARN-----YLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTV 136

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL  C        G++VH  +VK GF  DV +   LIN Y +   I    +VFDE   + 
Sbjct: 137 VLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQE 196

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
              W +++ A  R +  ++A+ LF  M     K    T+V ++ AC KL+ L  G ++  
Sbjct: 197 DFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHG 256

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y+   G  +N  + N++V MY +   ++ A+  F   +D N    N+I+S+Y        
Sbjct: 257 YVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNG 316

Query: 324 ALAILDEM-------------------LLHGP----------------RPDRVTMLSAVS 348
           A  +L EM                   LL G                 +PD  ++ SA+ 
Sbjct: 317 AWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQ 376

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A   LG    G+  HGY++R+ LE    +C +++D Y+K    + A  +F H  NK + +
Sbjct: 377 AVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICA 436

Query: 409 WNSLIAGLIKNGDVESAREVFSEM---------------------PGRDH---------- 437
           WNSLI+G    G  ++A ++ ++M                      GR            
Sbjct: 437 WNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIK 496

Query: 438 --------ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                   +SW  M+ G  Q   + +A++ F  M  E +K +  T+  +  AC     L 
Sbjct: 497 SLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLK 556

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
           + + I+ +  ++G   D+ +ATAL+DM+ + G  + A +VFR ++++ +  W   +   A
Sbjct: 557 IGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYA 616

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
           + G+GE+   LF+EM + G++PD+I F  +L+ C + GLV  GW  F SM   + ++P I
Sbjct: 617 IYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTI 676

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HY CMVDLLG+AG L EALD I ++P + +  IWG++LAAC+ H+++ IA  AA  +  
Sbjct: 677 EHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLR 736

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           L+P  S  + L+ NIY++  +W +V R++  M   G++     S I+V   +H F++  +
Sbjct: 737 LEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGK 796

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SHPE   I   L ++   ++  GYV D+  V  ++D+ EK+ +L  H+EKLAM +GL+ T
Sbjct: 797 SHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKT 856

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
               PIRVVKN R+C DCH+ AK +S   +REI +RD  RFH F  G CSC D W
Sbjct: 857 KGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRDGGRFHHFMNGECSCKDRW 911


>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 607

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/563 (42%), Positives = 337/563 (59%), Gaps = 7/563 (1%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE-ALAILDEMLLHGPRPDRVTML 344
           K G ++ A +LF    + +  L NT+   +  L      +L     ML H   P+  T  
Sbjct: 48  KHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFP 107

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + A     +    +  H +VL+ G  G     N +I +Y   G  + A R+F  MS+ 
Sbjct: 108 SLIRACKLEEE---AKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDP 164

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMP-GRDHISWNTMLGGLTQENMFEEAMELFRVM 463
            VVSW SL++G  + G V+ A  VF  MP  ++ +SWN M+    + N F EA  LFR M
Sbjct: 165 NVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRM 224

Query: 464 -LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
            + +++++DR     + SAC  +GAL+   WI+ Y+EK GI  D +LAT ++DM+ +CG 
Sbjct: 225 RVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGC 284

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLT 581
             +A  VF  ++ + VS+W   IG  AM G GE A+ LF EM  +  + PDSI FV VLT
Sbjct: 285 LDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLT 344

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           AC+H GLV +GW+ FR M D+HG+ P   HYGCMVDLL RAG L EA  +I  MP+ P+ 
Sbjct: 345 ACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDA 404

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            + G+LL AC+ H N+++      R+ ELDPE SG +V+L N+YAS GKW  VA VR  M
Sbjct: 405 AVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLM 464

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            ++G++K PG S IE+ G V+EF +G   HP    I + + EM   +R  G+VPD   VL
Sbjct: 465 DDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVL 524

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            D+ E+E++  L +HSEKLA+A+GL+ T +   +RV KNLR+C DCH  +K++SKVYD +
Sbjct: 525 HDLVEEERENPLFYHSEKLAIAYGLLKTKRGETLRVTKNLRVCKDCHQASKMISKVYDCD 584

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           II+RD +RFH F  G CSC D+W
Sbjct: 585 IIIRDRSRFHHFSNGECSCKDYW 607



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 194/425 (45%), Gaps = 48/425 (11%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C ++ E+KQ H  +L+ GL      +S++   C+ +     + YA K F   + + +T  
Sbjct: 12  CSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCS-LSKHGDINYALKLFTT-LPNPDT-- 67

Query: 102 TLFMYNSLIRGYSCIGLGVEAISL--YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
             F+YN+L + +  +     ++SL  Y  +    + P+ FTFP ++ AC       E  Q
Sbjct: 68  --FLYNTLFKAFFSLS-QTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEE---EAKQ 121

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  ++K GF  D +  N LI+ Y   G + D RRVF  MS+ NVVSWTSL+   ++  L
Sbjct: 122 LHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGL 181

Query: 220 PKEAVYLFFEM---------------------------------VEEGIKPNSVTMVCVI 246
             EA  +F  M                                 VE+ ++ +      ++
Sbjct: 182 VDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATML 241

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           SAC  +  LE G  +  Y+++ G+  ++ +   ++DMY KCG +D A  +F   K + + 
Sbjct: 242 SACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVS 301

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
             N ++  +   G   +A+ +  EM       PD +T ++ ++A A  G +  G     Y
Sbjct: 302 SWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRY 361

Query: 366 VLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE 423
           ++  +G++        M+D+  + G+ E A ++ D M  +       +L+     +G++E
Sbjct: 362 MVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLE 421

Query: 424 SAREV 428
              EV
Sbjct: 422 LGEEV 426



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 135/379 (35%), Gaps = 113/379 (29%)

Query: 14  TPTVTTLTNQHKAK--TTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           TP+++ L   H  +   TP        ++ CK   E KQ H H+LK G G     ++ ++
Sbjct: 83  TPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEEEAKQLHAHVLKFGFGGDTYALNNLI 142

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA- 130
                 G   SL  A++ F      N  S T     SL+ GYS  GL  EA  ++  +  
Sbjct: 143 HVYFAFG---SLDDARRVFCTMSDPNVVSWT-----SLVSGYSQWGLVDEAFRVFELMPC 194

Query: 131 ----------------------GFGILP----------DKFTFPFVLNACTKSSAFGEGV 158
                                  F +            D+F    +L+ACT   A  +G+
Sbjct: 195 KKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGM 254

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDI----------------------------- 189
            +H  + K G   D  +   +I+ Y +CG +                             
Sbjct: 255 WIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHG 314

Query: 190 --VDGRRVFDEMSERNVV-----SWTSLICACARRDLPKEAVYLFFEMV----------- 231
              D  R+F EM E  +V     ++ +++ ACA   L +E  Y F  MV           
Sbjct: 315 KGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEH 374

Query: 232 --------------EEGIK--------PNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
                         EE  K        P++  +  ++ AC    NLELG+ V   + EL 
Sbjct: 375 YGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELD 434

Query: 270 MKANALMVNALVDMYMKCG 288
            + +   V  L +MY  CG
Sbjct: 435 PENSGRYV-ILGNMYASCG 452



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 7/185 (3%)

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV-MLSERIKVDRVT 474
           L K+GD+  A ++F+ +P  D   +NT+       +       LF   ML   +  +  T
Sbjct: 46  LSKHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFT 105

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              +  AC      + AK ++A++ K G   D      L+ ++   G    A +VF  M 
Sbjct: 106 FPSLIRACKL---EEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMS 162

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
             +V +WT+ +   +  G  ++A  +F  M     K +S+ +  ++     G    + + 
Sbjct: 163 DPNVVSWTSLVSGYSQWGLVDEAFRVFELM---PCKKNSVSWNAMIACFVKGNRFREAFA 219

Query: 595 LFRSM 599
           LFR M
Sbjct: 220 LFRRM 224


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/651 (37%), Positives = 378/651 (58%), Gaps = 40/651 (6%)

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           +V SW S+I   AR     EA+  F  M +  + P   +  C I AC+ L ++  G +  
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                 G +++  + +AL+ MY  CG ++ A+++F E   RN+V   +++  Y   G A 
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159

Query: 323 EALAILDEMLLHGPRPDRVTML------SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           +A+++  ++L+     D    L      S +SA +++         H +V++ G +   S
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219

Query: 377 ICNTMIDMYMKCGKQEMAC--RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
           + NT++D Y K G+  +A   +IFD + +K  VS+NS+++   ++G              
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG-------------- 265

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVASACGYLGALDLAKW 493
                            M  EA E+FR ++  + +  + +T+  V  A  + GAL + K 
Sbjct: 266 -----------------MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+  + + G+  D+ + T+++DM+ +CG  + A + F RM+ ++V +WTA I    M G+
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
             +A+ELF  M+  G++P+ I FV VL ACSH GL  +GW  F +M    GV P + HYG
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVDLLGRAG L +A DLI+ M ++P+ +IW SLLAAC+ H+NV++A  +  R+ ELD  
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSS 488

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G ++LLS+IYA AG+W +V RVR+ MK +G+ K PG S +E+NG+VH F  GDE HP+
Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQ 548

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I   L E+N +L +AGYV + ++V  DVDE+EK+  L  HSEKLA+AFG+++T    
Sbjct: 549 REKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS 608

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            + VVKNLR+C DCH+  KL+SK+ DRE +VRD  RFH F+ G CSC D+W
Sbjct: 609 TVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 234/484 (48%), Gaps = 56/484 (11%)

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F+ Y+   +    +F +NS+I   +  G   EA+  +  +    + P + +FP  + AC+
Sbjct: 32  FNRYVDKTD----VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS 87

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
                  G Q H      G+  D+FV + LI  Y  CG + D R+VFDE+ +RN+VSWTS
Sbjct: 88  SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147

Query: 210 LICACARRDLPKEAVYLFFEMV------EEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +I          +AV LF +++      ++ +  +S+ +V VISAC+++    L + + +
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207

Query: 264 YIDELGMKANALMVNALVDMYMKC--GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
           ++ + G      + N L+D Y K   G V  A+++F +  D++ V  N+IMS Y + G++
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQL------GDLLCGRMCHGYVLRNGLEGWD 375
            EA  +   ++      ++V   +A++ S  L      G L  G+  H  V+R GLE   
Sbjct: 268 NEAFEVFRRLV-----KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +  ++IDMY KCG+ E A + FD M NK V SW ++IAG   +G               
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA------------- 369

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWI 494
                              +A+ELF  M+   ++ + +T V V +AC + G  ++  +W 
Sbjct: 370 ------------------AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            A   + G+   ++    +VD+  R G  Q+A  + +RM+ K D   W++ + A  +  N
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471

Query: 554 GEQA 557
            E A
Sbjct: 472 VELA 475



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 206/427 (48%), Gaps = 22/427 (5%)

Query: 13  ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISK 69
           +   +   ++  K    P  S    ++K C +L ++   KQ H      G        S 
Sbjct: 57  SAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSA 116

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++   +  G  E    A+K FD   K N  S T     S+IRGY   G  ++A+SL+ +L
Sbjct: 117 LIVMYSTCGKLED---ARKVFDEIPKRNIVSWT-----SMIRGYDLNGNALDAVSLFKDL 168

Query: 130 A------GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
                     +  D      V++AC++  A G    +H  ++K GFDR V V N L++ Y
Sbjct: 169 LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228

Query: 184 GECGD--IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP-NSV 240
            + G+  +   R++FD++ +++ VS+ S++   A+  +  EA  +F  +V+  +   N++
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T+  V+ A +    L +G  +   +  +G++ + ++  +++DMY KCG V+TA++ F   
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG- 359
           K++N+     +++ Y   G A +AL +   M+  G RP+ +T +S ++A +  G  + G 
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIK 418
           R  +    R G+E        M+D+  + G  + A  +   M  K   + W+SL+A    
Sbjct: 409 RWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRI 468

Query: 419 NGDVESA 425
           + +VE A
Sbjct: 469 HKNVELA 475


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/750 (34%), Positives = 411/750 (54%), Gaps = 52/750 (6%)

Query: 131  GFGILPDKFTFPFVLNAC-----TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
            GF I    F  P  L +C     T S++      +H   VK G  + +   N L+  Y +
Sbjct: 278  GFSI-SSYFYPPLWLQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAK 336

Query: 186  CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
              ++   +++FDE+ +RN  +WT LI   AR    +    LF EM  +G  PN  T+  V
Sbjct: 337  SNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSV 396

Query: 246  ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF-------- 297
            +  C+   NL+LG  V A++   G+  + ++ N+++D+Y+KC   + A++LF        
Sbjct: 397  LKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDV 456

Query: 298  -------------GECKD----------RNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
                         G+ +           +++V  NTI+   ++ G  R AL  L  M+  
Sbjct: 457  VSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVEC 516

Query: 335  GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
            G     VT   A+  ++ L  +  GR  HG VL+ G +    I +++++MY KCG+ + A
Sbjct: 517  GTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKA 576

Query: 395  CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
              I              +   +++ G+   AR  + E P    +SW +M+ G      +E
Sbjct: 577  SIIL-----------RDVPLDVLRKGN---ARVSYKE-PKAGIVSWGSMVSGYVWNGKYE 621

Query: 455  EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
            + ++ FR+M+ E + VD  T+  + SAC   G L+  + ++AY++K G   D  + ++L+
Sbjct: 622  DGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLI 681

Query: 515  DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            DM+++ G    A  VFR+  + ++  WT+ I   A+ G G  A+ LF EML QGI P+ +
Sbjct: 682  DMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEV 741

Query: 575  VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
             F+GVL ACSH GL+ +G   FR M D + ++P + H   MVDL GRAG L +  + I  
Sbjct: 742  TFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFK 801

Query: 635  MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
              +     +W S L++C+ H+NV++  + +E + ++ P   G +VLLSN+ AS  +W   
Sbjct: 802  NGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEA 861

Query: 695  ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
            ARVR  M ++G++K PG S I++  ++H F  GD SHP+ + I S L  +  RL++ GY 
Sbjct: 862  ARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYS 921

Query: 755  PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
             D+  V+ DV+E++ + L+SHHSEKLA+ FG+I+T+   PIR++KNLR+C DCH+F K  
Sbjct: 922  FDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYA 981

Query: 815  SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            S++ DREIIVRD +RFH F+ GSCSC D+W
Sbjct: 982  SQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 243/579 (41%), Gaps = 93/579 (16%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           ++ +AQK FD   + N  + T+     LI G++  G      +L+ E+   G  P+++T 
Sbjct: 339 NMAHAQKLFDEIPQRNTQTWTI-----LISGFARAGSSEMVFNLFREMQAKGACPNQYTL 393

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             VL  C+  +    G  VH  +++ G D DV + N +++ Y +C       R+F+ M+E
Sbjct: 394 SSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNE 453

Query: 202 RNVVSWTSLICACAR-----------RDLP--------------------KEAVYLFFEM 230
            +VVSW  +I A  R           R LP                    + A+   + M
Sbjct: 454 GDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCM 513

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
           VE G + ++VT    +   + L ++ELG ++   + + G  ++  + ++LV+MY KCG +
Sbjct: 514 VECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRM 573

Query: 291 DTAKQLFGEC----------------KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           D A  +  +                     +V   +++S YV  G   + L     M+  
Sbjct: 574 DKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRE 633

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
               D  T+ + +SA A  G L  GR  H YV + G      + +++IDMY K G  + A
Sbjct: 634 LVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDA 693

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
             +F   +   +V W S+I+G   +G                         G+    +FE
Sbjct: 694 WMVFRQSNEPNIVMWTSMISGYALHGQ------------------------GMHAIGLFE 729

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATAL 513
           E       ML++ I  + VT +GV +AC + G ++   ++     +   I+  ++  T++
Sbjct: 730 E-------MLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSM 782

Query: 514 VDMFARCGDPQRAMQ-VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           VD++ R G   +    +F+       S W + + +  +  N E   +  +EML Q    D
Sbjct: 783 VDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMG-KWVSEMLLQVAPSD 841

Query: 573 SIVFVGVLTACSHGGLVNQGWH---LFRSMTDIHGVSPQ 608
              +V +   C+     N  W      RS+    GV  Q
Sbjct: 842 PGAYVLLSNMCAS----NHRWDEAARVRSLMHQRGVKKQ 876



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 140/325 (43%), Gaps = 25/325 (7%)

Query: 49  KQPHCHILKQGL---GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN------ET 99
           +Q H  +LK G    G   S + ++ C C +M    S+       D   K N      E 
Sbjct: 542 RQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDK-ASIILRDVPLDVLRKGNARVSYKEP 600

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
            A +  + S++ GY   G   + +  +  +    ++ D  T   +++AC  +     G  
Sbjct: 601 KAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRH 660

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           VH  + K+G   D +V + LI+ Y + G + D   VF + +E N+V WTS+I   A    
Sbjct: 661 VHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQ 720

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN- 278
              A+ LF EM+ +GI PN VT + V++AC+    +E G   C Y     M  +A  +N 
Sbjct: 721 GMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEG---CRYFR---MMKDAYCINP 774

Query: 279 ------ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
                 ++VD+Y + G +   K    +    +L        +  RL    E    + EML
Sbjct: 775 GVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEML 834

Query: 333 LH-GPR-PDRVTMLSAVSASAQLGD 355
           L   P  P    +LS + AS    D
Sbjct: 835 LQVAPSDPGAYVLLSNMCASNHRWD 859


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/790 (33%), Positives = 420/790 (53%), Gaps = 80/790 (10%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +L +++     L +    ++F     VH  ++  GF       N L+  Y +  ++V  R
Sbjct: 9   LLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYAR 68

Query: 194 RVFDEMSERNVVSWTSLI---CACARRDLPKE---------------------------- 222
           ++F+E+   + ++ T+LI   CA    +L +E                            
Sbjct: 69  QLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDG 128

Query: 223 --AVYLFFEMVEEGIKPNSVTMVCVISACAKL--QNLELGDRVCAYIDELGMK-ANALMV 277
             A+ LF  M  +  +P+  T   V+SA         + G   CA + + GM   ++ ++
Sbjct: 129 HSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVV-KTGMGCVSSSVL 187

Query: 278 NALVDMYMK--------CGAVDTAKQLFGECKDRNLVLCNTIMSNYVR------------ 317
           NAL+ +Y+K        C A+ +A++LF E   R+ +   T+++ YVR            
Sbjct: 188 NALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE 247

Query: 318 -----LGLA--------------REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
                LG A              +EAL +  +M   G + D +T  + +SA A +G    
Sbjct: 248 AMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQM 307

Query: 359 GRMCHGYVLRNGLEGWDSIC----NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           G+  H Y+L+N L    S C    N +I +Y K  K + A +IF  M  + +++WN++++
Sbjct: 308 GKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILS 367

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G +  G +E A+  F EMP ++ ++   M+ GL Q    +E ++LF+ M  +  +     
Sbjct: 368 GYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFA 427

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
             G  +AC  LGAL+  + ++A +   G    + +  A++ M+A+CG  + A  VF  M 
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
             D+ +W + I A+   G+G +A+ELF++ML++G+ PD I F+ VLTACSH GLV +G H
Sbjct: 488 SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRH 547

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F SM + +G++P   HY  MVDL  RAG+   A  +I SMP +P   +W +LLA C+ H
Sbjct: 548 YFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIH 607

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
            N+D+   AAE++ +L P+  G +VLLSNIYA  G+W +VA+VR  M++Q +RK P  S 
Sbjct: 608 GNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSW 667

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           IEV  KVH F   D+ HPE+ ++   L ++   ++  GY+PD   VL D++ ++K++ LS
Sbjct: 668 IEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALS 727

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
            HSEKLA+ FG++       +RV KN+R+C DCH+  K +SKV  REIIVRD  RFH F+
Sbjct: 728 THSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFK 787

Query: 835 QGSCSCSDFW 844
            G CSC D+W
Sbjct: 788 NGDCSCRDYW 797



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 229/541 (42%), Gaps = 111/541 (20%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV-QVHGA 163
            YN++I GY+  G G  A+ L+  +      PD FTF  VL+A        +   Q+H A
Sbjct: 114 FYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCA 173

Query: 164 IVKMGFD-RDVFVENCLINFYGE--------CGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           +VK G       V N L++ Y +        C  +V  R++FDEM +R+ ++WT++I   
Sbjct: 174 VVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGY 233

Query: 215 ARRDLPKEAVYLFFEMVEE-------------------------------GIKPNSVTMV 243
            R D    A  +F  MVE                                GI+ + +T  
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKCGAVDTAKQLFGE 299
            +ISACA + + ++G ++ AYI +  +  N        NAL+ +Y K   VD A+++F  
Sbjct: 294 TIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREA-------------------------------LAIL 328
              RN++  N I+S YV  G   EA                               L + 
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLF 413

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +M L G  P       A++A + LG L  GR  H  ++  G E   S+ N MI MY KC
Sbjct: 414 KQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKC 473

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G  E A  +F  M +  +VSWNS+IA L ++G                         G+ 
Sbjct: 474 GVVEAAESVFVTMPSVDLVSWNSMIAALGQHGH------------------------GV- 508

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIH-CD 506
                 +A+ELF  ML E +  DR+T + V +AC + G ++  + +  + +E  GI  C+
Sbjct: 509 ------KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCE 562

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
              A  +VD+F R G    A  V   M  K     W A +    + GN +  +E   ++ 
Sbjct: 563 DHYAR-MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLF 621

Query: 566 R 566
           +
Sbjct: 622 K 622



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 207/460 (45%), Gaps = 73/460 (15%)

Query: 50  QPHCHILKQGLGHKPSYI-----SKVVCTCAQMGT-FESLTYAQKAFDYYIKDNETSATL 103
           Q HC ++K G+G   S +     S  V   +++G    ++  A+K FD   K +E + T 
Sbjct: 169 QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTT 228

Query: 104 FM--------------------------YNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
            +                          +N++I GY   G   EA++L  ++   GI  D
Sbjct: 229 MITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFD 288

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD----VFVENCLINFYGECGDIVDGR 193
             T+  +++AC    +F  G Q+H  I+K   + +    + V N LI  Y +   + + R
Sbjct: 289 DITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEAR 348

Query: 194 RVFDEMSERNVVSW-------------------------------TSLICACARRDLPKE 222
           ++F  M  RN+++W                               T +I   A+     E
Sbjct: 349 KIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDE 408

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + LF +M  +G +P        ++AC+ L  LE G ++ A +  LG +++  + NA++ 
Sbjct: 409 GLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMIS 468

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG V+ A+ +F      +LV  N++++   + G   +A+ + D+ML  G  PDR+T
Sbjct: 469 MYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRIT 528

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
            L+ ++A +  G +  GR     +L + G+   +     M+D++ + G    A  + D M
Sbjct: 529 FLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSM 588

Query: 402 SNKTVVS-WNSLIAGLIKNGD----VESAREVFSEMPGRD 436
            +K     W +L+AG   +G+    +E+A ++F  MP  D
Sbjct: 589 PSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQND 628



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 20/214 (9%)

Query: 30  PKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P D    G+L  C  L  L   +Q H  ++  G     S  + ++   A+ G  E+   A
Sbjct: 423 PCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEA---A 479

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           +  F         S  L  +NS+I      G GV+AI L+ ++   G+ PD+ TF  VL 
Sbjct: 480 ESVFV-----TMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLT 534

Query: 147 ACTKSSAFGEGVQVHGAIVK-MGFD--RDVFVENCLINFYGECGDIVDGRRVFDEM-SER 202
           AC+ +    +G     ++++  G     D +    +++ +   G     R V D M S+ 
Sbjct: 535 ACSHAGLVEKGRHYFNSMLESYGITPCEDHYAR--MVDLFCRAGMFSYARIVIDSMPSKP 592

Query: 203 NVVSWTSLICAC---ARRDLPKEAVYLFFEMVEE 233
               W +L+  C      DL  EA    F+++ +
Sbjct: 593 GAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ 626


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 284/784 (36%), Positives = 421/784 (53%), Gaps = 78/784 (9%)

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F +NSLI   +       A++ +  +    +  + FTFP +L AC         +QVH  
Sbjct: 19  FHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAY 77

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER--NVVSWTSLICACARRDLPK 221
           + ++G   D F    L++ YG+CG      +VFDEM E   +VVSWT+LI A +      
Sbjct: 78  LTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVD 137

Query: 222 EAVYLFFEMV-------EEGIKPNSVTMVCVISACA---KLQNLELGDRVCAYIDELGMK 271
           EA   F  M         E    + V++  ++SACA       L  G  V   + + G  
Sbjct: 138 EAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFG 197

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
            +  + N++V MY  C  V  A ++F     + R++V  N+++S +   G A  AL   +
Sbjct: 198 VSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFE 257

Query: 330 EMLLHGP---RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG---LEGWDSICNT-MI 382
           +M+  G     P+RVT+++ + + A+LG +      H Y+       L   D +  T ++
Sbjct: 258 DMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALL 317

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DM+ +CG   +A  IFD +  K VV W+++IA                            
Sbjct: 318 DMHARCGNLALAREIFDGVEGKNVVCWSAMIA---------------------------- 349

Query: 443 MLGGLTQENMFEEAMELFRVMLSE------RIKVDRVTMVGVASACGYLGALDLAKWIYA 496
              G  Q +  EEA+ LFR ML E       +K + VT+V V +AC  LGA   A  I+ 
Sbjct: 350 ---GYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHK 406

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK--RDVSAWTAAIGAMAMEGNG 554
           Y    G+  D ++A+AL+DM A+CGD +   QVF  M++  R V +W++ IGA  + G G
Sbjct: 407 YAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEG 466

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           ++A+ELF+EM   G +P+ I ++ VL+ACSH GLV QG   F SM   +G+SP   HY C
Sbjct: 467 KRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYAC 526

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           +VDLLGRAG L EA ++I +MP++ +  +WGSLLAAC  H N  +     ++I  LD   
Sbjct: 527 LVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNS 586

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
            G HVLL+N+Y  AG+W +V R+R++++  G+RK+PG S IE+  +V+ F + D SHPE 
Sbjct: 587 VGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPES 646

Query: 735 NNISSMLREMNCRLRDAG-YVPDLTNVLLDVDEQEKKYLL---SHHSEKLAMAFGLI--- 787
             I   L  ++ R+R A  YV   T   L+V++ +   L+    +HSE+LA+AFGLI   
Sbjct: 647 EMIYKELDGLDERVRKAAKYV---TETGLNVEDGDIAGLIXRCKYHSERLAIAFGLIMID 703

Query: 788 -------STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
                  S     PIR+ KNLR+C DCH++ KLVSKV DRE+IVRD +RFH FR G CSC
Sbjct: 704 RHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSC 763

Query: 841 SDFW 844
            D+W
Sbjct: 764 GDYW 767



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 229/517 (44%), Gaps = 96/517 (18%)

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           +S ++   W SLI   A ++ P+ A+  F  M    +  N+ T   ++ ACA L+ L   
Sbjct: 13  ISHKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR--NLVLCNTIMSNYV 316
            +V AY+  LG+ A+     ALVD Y KCG    A Q+F E  +   ++V    ++S Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 317 RLGLAREALAILDEM-LLHGPRP------DRVTMLSAVSASAQLGDLLCGRMC------- 362
             G   EA      M  + G         D V++ + VSA A    + CG  C       
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACA----VGCGSNCLRRGSAV 187

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNG 420
           HG V++ G      + N+M+ MY  C     A R+F+   +  + VVSWNSLI+G   NG
Sbjct: 188 HGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNG 247

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
           + E A   F                    E+M  E         +  ++ +RVT++ +  
Sbjct: 248 EAERALRTF--------------------EDMVSEG--------TSAVEPNRVTVIALLK 279

Query: 481 ACGYLGALDLAKWIYAYIEKNG----IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
           +C  LG ++ + W++ YI        +  D+ + TAL+DM ARCG+   A ++F  +E +
Sbjct: 280 SCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGK 339

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG------IKPDSIVFVGVLTACSHGGL-- 588
           +V  W+A I         E+A+ LF +ML +G      +KP+++  V V+ ACS  G   
Sbjct: 340 NVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASR 399

Query: 589 -------------VNQGWHLFRSMTDI--------HG---------VSPQIVHYGCMVDL 618
                        ++Q   +  ++ D+        HG          +  +V +  M+  
Sbjct: 400 SASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGA 459

Query: 619 LGRAGLLGEALDLIKSMPV---EPNDVIWGSLLAACQ 652
            G  G    AL+L   M     EPN++ + S+L+AC 
Sbjct: 460 EGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACS 496


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/601 (39%), Positives = 364/601 (60%), Gaps = 36/601 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V+ AC  L +   G ++   + +LG + +  +  +LV MY + G V  A++LF +   R+
Sbjct: 3   VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
               N ++S Y + G A EAL I DEM L G + D +T+ S +   AQ+GD+L G++ H 
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           YV+++GLE    + N +I+MY K G    A ++F                GL+       
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF----------------GLLI------ 157

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS-ERIKVDRVTMVGVASACG 483
                     +D +SWNT++ G  Q  +  EA+E++ +M   E I  ++ T V +  A  
Sbjct: 158 ----------KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYS 207

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           ++GAL     I+  + KN ++ D+ + T L+DM+ +CG    A+ +F ++ +++   W A
Sbjct: 208 HVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNA 267

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I    + G+GE+A+ELF EM  + +KPD I FV +L+ACSH GLV+     F  M + +
Sbjct: 268 MISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEY 327

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
           G+ P + HYGCMVDL GRAG L  A + IK MP++P+   WG+LL AC+ H N+++  +A
Sbjct: 328 GIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHA 387

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
           +ER+ E+D E  G +VLLSNIYA+ GKW  V  VR   +++G+RK PG SSI +N KV  
Sbjct: 388 SERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDV 447

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F +G+++HP+   I   LR++  +++  GYVPD   VL DV+E EK+++L  HSE+LA+A
Sbjct: 448 FYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIA 507

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           +G+ISTS   PIR+ KNLR+C DCH+  K +S + +REIIVRD++RFH F+ G+CSC D+
Sbjct: 508 YGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDY 567

Query: 844 W 844
           W
Sbjct: 568 W 568



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 220/433 (50%), Gaps = 49/433 (11%)

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
           P V+ AC       +G ++H  ++K+GF+ DVFV   L++ Y   G + D R++FD+M  
Sbjct: 1   PPVVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R+  SW ++I    +     EA+ +  EM  EG+K +++T+  V+  CA++ ++  G  +
Sbjct: 58  RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
             Y+ + G++    + NAL++MY K G++  A+++FG    +++V  NT+++ Y + GLA
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLA 176

Query: 322 REALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            EA+ +   M  H    P++ T +S + A + +G L  G   HG V++N L     +   
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTC 236

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----D 436
           +IDMY KCGK + A  +F  +  K  V WN++I+    +GD E A E+F EM       D
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPD 296

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
           HI++ ++L                                   SAC + G +  A+W + 
Sbjct: 297 HITFVSLL-----------------------------------SACSHSGLVSDAQWCFN 321

Query: 497 YIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN- 553
            +E+  GI   ++    +VD+F R G+ + A    ++M  + D SAW A + A  + GN 
Sbjct: 322 MMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNI 381

Query: 554 --GEQAVELFNEM 564
             G+ A E   E+
Sbjct: 382 ELGKHASERLFEV 394



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 188/396 (47%), Gaps = 20/396 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +K C  L + K+ HC +LK G        + +V   ++ G       A+K FD     + 
Sbjct: 4   VKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGD---ARKLFDDMPARDR 60

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            S     +N++I GY   G   EA+ +  E+   G+  D  T   VL  C +      G 
Sbjct: 61  GS-----WNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGK 115

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +H  ++K G + ++FV N LIN Y + G +   ++VF  +  ++VVSW +LI   A+  
Sbjct: 116 LIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNG 174

Query: 219 LPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           L  EA+ ++  M E E I PN  T V ++ A + +  L+ G R+   + +  + ++  + 
Sbjct: 175 LASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVG 234

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
             L+DMY KCG +D A  LF +   +N V  N ++S Y   G   +AL +  EM     +
Sbjct: 235 TCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVK 294

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHG-----YVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           PD +T +S +SA +  G +   + C       Y ++  L+ +      M+D++ + G+ E
Sbjct: 295 PDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHY----GCMVDLFGRAGELE 350

Query: 393 MACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESARE 427
           MA      M  +   S W +L+     +G++E  + 
Sbjct: 351 MAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKH 386


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/602 (39%), Positives = 353/602 (58%), Gaps = 38/602 (6%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+  Y  CG     + +F E  D+N+V  N ++ +YV  GL ++AL +   M   G  PD
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T    + A +  G+L  G   HG V++ GL+    I N ++ MY KC   + A R+ D
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESA---------------------------------- 425
            M  + +VSWNS++AG  +NG    A                                  
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV 256

Query: 426 ---REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
              +++F ++  +  ISWN M+       M  EA++L+  M    ++ D V++  V  AC
Sbjct: 257 LYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPAC 316

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           G L A  L + I+ Y+E+  +  ++ L  AL+DM+A+CG  + A  VF +M  RDV +WT
Sbjct: 317 GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWT 376

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + I A  M G G+ AV LF +M   G  PD I FV VL ACSH GLV++G + F  M + 
Sbjct: 377 SMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE- 435

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           +G++P I HY CMVDLLGRAG + EA  L + MP+EPN+ +WGSLL+AC+ + +++IA  
Sbjct: 436 YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALL 495

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA+ + +L PE+SG +VLLSNIYA AG+W +V  VR  M  +GI+K+PG+S++E+N  V+
Sbjct: 496 AADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVY 555

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F +GD+SH +   I   L  +  R+++ GY+P+  + L DV+E++K+  L+ HSEKLA+
Sbjct: 556 TFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAI 615

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
            F +++T     IR+ KN+R+C DCH   KL+SK+ +REII+RD +RFH FR G CSC D
Sbjct: 616 VFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGD 675

Query: 843 FW 844
           +W
Sbjct: 676 YW 677



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 237/522 (45%), Gaps = 81/522 (15%)

Query: 19  TLTNQHKAKTTPKDSPSIGSLKNCKTLN------ELKQPHCHIL-KQGLGHKPSYISKVV 71
           +LT Q K + +PK +     L N K L+       LK+ H  IL  Q L   PS   K++
Sbjct: 21  SLTTQ-KPQLSPKFTALTEDLCN-KILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLM 78

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
              A  G        +  +  +I D  T   +  +N +IR Y   GL  +A+ ++  +A 
Sbjct: 79  RAYAACG--------EPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMAN 130

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G  PD +T+P VL AC+ S     G+Q+HGA+VK+G D ++++ N L++ YG+C  +  
Sbjct: 131 QGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDA 190

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            RRV DEM  R++VSW S++   A+     +A+ L  EM +  +KP++ TM  ++ A   
Sbjct: 191 ARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN 250

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
                                              C  V   K +F + K+++L+  N +
Sbjct: 251 ---------------------------------TSCDNVLYVKDMFVKLKEKSLISWNVM 277

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           ++ YV   +  EA+ +  +M +HG  PD V++ S + A   L   + GR  H YV R  L
Sbjct: 278 IAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKL 337

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
                + N +IDMY KCG  + A  +FD M  + VVSW S+I+    +G           
Sbjct: 338 RPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQ---------- 387

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
             G+D                   A+ LF+ M       D +  V V +AC + G +D  
Sbjct: 388 --GKD-------------------AVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEG 426

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           ++ +  + + GI   ++    +VD+  R G    A  + R+M
Sbjct: 427 RYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQM 468



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 150/313 (47%), Gaps = 38/313 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS++ GY+  G   +A+ L  E+    + PD  T   +L A T +S             
Sbjct: 206 WNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTS------------- 252

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
                               C +++  + +F ++ E++++SW  +I       +P EAV 
Sbjct: 253 --------------------CDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVD 292

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L+ +M   G++P++V++  V+ AC  L    LG R+  Y++   ++ N L+ NAL+DMY 
Sbjct: 293 LYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYA 352

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +  A+ +F +   R++V   +++S Y   G  ++A+A+  +M   G  PD +  +S
Sbjct: 353 KCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVS 412

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM---S 402
            ++A +  G +  GR C   +   G+       N M+D+  + GK + A  +   M    
Sbjct: 413 VLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEP 472

Query: 403 NKTVVSWNSLIAG 415
           N+ V  W SL++ 
Sbjct: 473 NERV--WGSLLSA 483



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 1/110 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + S+I  Y   G G +A++L+ ++   G  PD   F  VL AC+ +    EG      + 
Sbjct: 375 WTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA 434

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
           + G    +   NC+++  G  G I +   +  +M  E N   W SL+ AC
Sbjct: 435 EYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSAC 484



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 54/308 (17%)

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           I++N +H +  L   L+  +A CG+P     +F  +  ++V  +   I +    G  + A
Sbjct: 63  IDQN-LHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDA 121

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQG----WHLFRSMTDI 602
           + +F  M  QG  PD+  +  VL ACS           HG +V  G     ++   +  +
Sbjct: 122 LLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSM 181

Query: 603 HG---------------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIW 644
           +G                   +V +  MV    + G   +AL L + M    ++P+    
Sbjct: 182 YGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTM 241

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGV--HVLLSNIYASAGKWTNVARVRLQMK 702
           GSLL A   + + D   Y  +   +L  EKS +  +V+++ +Y +         + LQM+
Sbjct: 242 GSLLPAVT-NTSCDNVLYVKDMFVKLK-EKSLISWNVMIA-VYVNNAMPNEAVDLYLQMQ 298

Query: 703 EQGIRK--------LP--GSSSIEVNG-KVHEFTSGDESHPEM---NNISSMLREMNCRL 748
             G+          LP  G  S  V G ++HE+    +  P +   N +  M  +  C L
Sbjct: 299 VHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGC-L 357

Query: 749 RDAGYVPD 756
           ++A  V D
Sbjct: 358 KEARAVFD 365


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/705 (34%), Positives = 390/705 (55%), Gaps = 63/705 (8%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           ++F  N +++ Y + G +   +++F+ M  R+ VSW   I   A      +AV ++  M+
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 232 EEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
           ++  +  N +T   ++  C+K + ++LG ++   I + G  ++  + + LVDMY K G +
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLG------------------------------- 319
             AK+ F E  +RN+V+CNT+++  +R G                               
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           L REAL +  EM L G   D+ T  S ++A   L  L  G+  H YV+R   +    + +
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++DMY KC                                 ++SA  VF  MP ++ IS
Sbjct: 310 ALVDMYSKCR-------------------------------SIKSAETVFKRMPQKNVIS 338

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           W  ML G  Q    EEA+++F  M    ++ D  T+  V S+C  L +L+     +    
Sbjct: 339 WTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRAL 398

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
            +G+   + ++ AL+ ++ +CG  + + ++F  M  RD  +WTA +   A  G   + + 
Sbjct: 399 VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIG 458

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF  ML  G+KPD + F+GVL+ACS  GLV +G   F SM   HG+ P + H  C++DLL
Sbjct: 459 LFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLL 518

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L EA + I +MP  P+ V W +LL++C+ H +++I  +AA+ +  L+P+    +V
Sbjct: 519 GRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYV 578

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLS++YAS GKW  VA++R  M+++ +RK PG S I+  GKVH F++ D+S P +  I +
Sbjct: 579 LLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYA 638

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L ++N ++ + GYVPD+++VL DV+E EK  +L+HHSEKLA+AFGLI     +PIRV+K
Sbjct: 639 ELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIK 698

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+  K +SK+  REI+VRD  RFH F+ G+CSC DFW
Sbjct: 699 NLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 257/581 (44%), Gaps = 106/581 (18%)

Query: 42  CKTLNEL--KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           C++ N+   K+ HC ILK  +    +++S  + T        +L YA   FD+  + N  
Sbjct: 16  CESQNQTQAKKLHCLILKT-IKQPETFLSNNLITAYY--KLGNLAYAHHVFDHIPQPN-- 70

Query: 100 SATLFMYNSLIRGYSCIGLGVE------------AISLYVELAGFG-------------- 133
              LF +N+++  YS +GL  +             +S  + ++G+               
Sbjct: 71  ---LFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 134 ILPD------KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           +L D      + TF  +L  C+K      G Q++G I+K GF  DVFV + L++ Y + G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 188 DIVDGRRVFDEMSERNVV-------------------------------SWTSLICACAR 216
            I D +R FDEM ERNVV                               SWT +I    +
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
             L +EA+ +F EM   G   +  T   V++AC  L  L  G ++ AY+     K N  +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            +ALVDMY KC ++ +A+ +F     +N++    ++  Y + G + EA+ I  EM  +G 
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            PD  T+ S +S+ A L  L  G   H   L +GL  + ++ N +I +Y KCG  E + R
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F  M+ +  VSW +L+AG  + G                                  E 
Sbjct: 428 LFTEMNIRDEVSWTALLAGYAQFGKA-------------------------------NET 456

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVD 515
           + LF  ML+  +K D VT +GV SAC   G ++   ++  + I+++GI   +   T ++D
Sbjct: 457 IGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIID 516

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +  R G  + A      M    DV  W   + +  + G+ E
Sbjct: 517 LLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDME 557



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 148/354 (41%), Gaps = 65/354 (18%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H  +L+   +    + N +I  Y K G    A  +FDH+    + SWN++++   K G +
Sbjct: 28  HCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLL 87

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASA 481
              +++F+ MP RD +SWN  + G        +A+ ++++ML +  + ++R+T   +   
Sbjct: 88  SQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLIL 147

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA----------------------- 518
           C     +DL + I   I K G   D+ + + LVDM+                        
Sbjct: 148 CSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMC 207

Query: 519 --------RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
                   RCG  + + ++F  +++RD  +WT  I  +   G   +A+++F EM   G  
Sbjct: 208 NTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFA 267

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHL----------------------------FRSMTDI 602
            D   F  VLTAC     + +G  +                             +S   +
Sbjct: 268 MDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETV 327

Query: 603 HGVSPQ--IVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAAC 651
               PQ  ++ +  M+   G+ G   EA+ +   M    VEP+D   GS++++C
Sbjct: 328 FKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSC 381


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/636 (38%), Positives = 366/636 (57%), Gaps = 37/636 (5%)

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           SL+  C RRDLP  A+++   M   G+  +S+T   +I  C     +  G RV  +I   
Sbjct: 256 SLLNHCYRRDLP-SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSN 314

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G      + N L++MY+K   ++ A+ LF +  +RN+V   T++S Y    L   A+ +L
Sbjct: 315 GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLL 374

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             M   G  P+  T  S + A  +L DL   +  H ++++ GLE    + + +ID+Y K 
Sbjct: 375 AFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKM 431

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G                               ++  A +VF EM   D + WN+++    
Sbjct: 432 G-------------------------------ELLEALKVFREMMTGDSVVWNSIIAAFA 460

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           Q +  +EA+ L++ M       D+ T+  V  AC  L  L+L +  + ++ K     D+ 
Sbjct: 461 QHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLI 518

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           L  AL+DM+ +CG  + A  +F RM K+DV +W+  I  +A  G   +A+ LF  M  QG
Sbjct: 519 LNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQG 578

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
            KP+ I  +GVL ACSH GLVN+GW+ FRSM +++G+ P   HYGCM+DLLGRA  L + 
Sbjct: 579 PKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDM 638

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
           + LI  M  EP+ V W +LL AC+  QNVD+A YAA+ I +LDP+ +G +VLLSNIYA +
Sbjct: 639 VKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAIS 698

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
            +W +VA VR  MK++GIRK PG S IEVN ++H F  GD+SHP+++ I+  L +  CRL
Sbjct: 699 KRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRL 758

Query: 749 RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
             AGYVPD   VL D++ ++++  L +HSEKLA+ FG++S  K   IR+ KNL++C DCH
Sbjct: 759 AGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCH 818

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            FAKL++++  R I++RD  R+H F+ G CSC D+W
Sbjct: 819 KFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 211/440 (47%), Gaps = 46/440 (10%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+  D  T+  ++  C    A  EG +VH  I   G+    F+ N LIN Y +   + + 
Sbjct: 280 GVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEA 339

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           + +FD+M ERNVVSWT++I A +   L   A+ L   M  +G+ PN  T   V+ AC +L
Sbjct: 340 QVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERL 399

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            +L+   ++ ++I ++G++++  + +AL+D+Y K G +  A ++F E    + V+ N+I+
Sbjct: 400 YDLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSII 456

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           + + +     EAL +   M   G   D+ T+ S + A   L  L  GR  H +VL+    
Sbjct: 457 AAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK---- 512

Query: 373 GWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            +D    + N ++DMY KCG  E A  IF+ M+ K V+SW+++IAGL +NG        F
Sbjct: 513 -FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNG--------F 563

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
           S                        EA+ LF  M  +  K + +T++GV  AC + G ++
Sbjct: 564 S-----------------------MEALNLFESMKVQGPKPNHITILGVLFACSHAGLVN 600

Query: 490 LAKWIYAYIEKN--GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIG 546
              W Y     N  GI    +    ++D+  R       +++   M  + DV  W   + 
Sbjct: 601 -EGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLD 659

Query: 547 AMAMEGNGEQAVELFNEMLR 566
           A     N + A     E+L+
Sbjct: 660 ACRARQNVDLATYAAKEILK 679



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 209/431 (48%), Gaps = 27/431 (6%)

Query: 15  PTVTTLTNQHKAKTTPKDSPSIGSLKNC----KTLNELKQPHCHILKQGLGHKPSYISKV 70
           P+   + +  + +    DS +   L  C      + E K+ H HI   G  H  ++++ +
Sbjct: 267 PSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGY-HPKTFLTNI 325

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           +        F  L  AQ  FD   + N  S T     ++I  YS   L   A+ L   + 
Sbjct: 326 LIN--MYVKFNLLEEAQVLFDKMPERNVVSWT-----TMISAYSNAQLNDRAMRLLAFMF 378

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
             G++P+ FTF  VL AC +     +  Q+H  I+K+G + DVFV + LI+ Y + G+++
Sbjct: 379 RDGVMPNMFTFSSVLRACER---LYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELL 435

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           +  +VF EM   + V W S+I A A+     EA++L+  M   G   +  T+  V+ AC 
Sbjct: 436 EALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACT 495

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            L  LELG +  A++  L    + ++ NAL+DMY KCG+++ AK +F     ++++  +T
Sbjct: 496 SLSLLELGRQ--AHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWST 553

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++   + G + EAL + + M + GP+P+ +T+L  + A +  G  L     + +   N 
Sbjct: 554 MIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAG--LVNEGWYYFRSMNN 611

Query: 371 LEGWD---SICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE--- 423
           L G D        M+D+  +  K +   ++   M+    VV+W +L+       +V+   
Sbjct: 612 LYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLAT 671

Query: 424 -SAREVFSEMP 433
            +A+E+    P
Sbjct: 672 YAAKEILKLDP 682


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/707 (35%), Positives = 383/707 (54%), Gaps = 37/707 (5%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C+K+  F +G+QVH A V MGF  D+ + N LI+ YG+C  +     VFD M ERN
Sbjct: 10  LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSWT+L+C   +    K ++ L  EM   G+KPN  T    + AC  L  +E G ++  
Sbjct: 70  VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              + G +  +++ NA +DMY KCG +  A+Q+F +   RNLV  N +++ +   G  R+
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG--LEGWDSICNTM 381
           +L +   M   G  PD  T  S + A   LG +  G   H  ++  G  +   + I + +
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAI 249

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           +D+Y KCG    A ++FD +  K +                               ISW+
Sbjct: 250 VDLYAKCGYLFEAQKVFDRIEQKNL-------------------------------ISWS 278

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            ++ G  QE    EAM+LFR +      VD   +  +      L  ++  K ++ YI K 
Sbjct: 279 ALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKV 338

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
               D+ +A +++DM+ +CG  + A ++F  M+ R+V +WT  I      G GE+A+ LF
Sbjct: 339 PSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLF 398

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           N M   GI+ D + ++ +L+ACSH GL+ +    F  + + H + P I HY CMVD+LGR
Sbjct: 399 NRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGR 458

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG L EA +LI++M ++PN+ IW +LL+AC+ H N++I     E +  +D +    +V++
Sbjct: 459 AGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMM 518

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIYA AG W    RVR  +K +G++K  G S +E+N ++H F  GD++HP    I  ML
Sbjct: 519 SNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEML 578

Query: 742 REMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS---TSKTMPIRV 797
           +EM  R++ + GY   L   L DV+E+ K+  L  HSEKLA+   L+      K   IRV
Sbjct: 579 KEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRV 638

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KNLR+C DCH F K +SK+  +  +VRD NRFH F  G CSC D+W
Sbjct: 639 FKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 227/483 (46%), Gaps = 44/483 (9%)

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           FD  ++ N  S T     +L+ GY   G    +++L  E+   G+ P++FTF   L AC 
Sbjct: 62  FDRMLERNVVSWT-----ALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACG 116

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
                  G+Q+HG  VK GF+    V N  I+ Y +CG I    +VF++M  RN+VSW +
Sbjct: 117 ALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNA 176

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I         ++++ LF  M  +G  P+  T    + AC  L  +  G ++ A +   G
Sbjct: 177 MIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRG 236

Query: 270 --MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
             +    ++ +A+VD+Y KCG +  A+++F   + +NL+  + ++  + + G   EA+ +
Sbjct: 237 FPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDL 296

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSICNTMIDMY 385
             ++       D   +   +   A L  +  G+  H Y+L+  +GL+   S+ N++IDMY
Sbjct: 297 FRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLD--ISVANSIIDMY 354

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
           +KCG  E A R+F  M  + VVSW  +I G  K+G                         
Sbjct: 355 LKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHG------------------------- 389

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIH 504
                 + E+A+ LF  M  + I++D V  + + SAC + G +  ++  ++ +  N  + 
Sbjct: 390 ------LGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMK 443

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
            +++    +VD+  R G  + A  +   M+ K +   W   + A  + GN E   E+   
Sbjct: 444 PNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEI 503

Query: 564 MLR 566
           + R
Sbjct: 504 LFR 506



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 2/180 (1%)

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           +R  +  +   C   G  D    ++A     G   D+ +   L+DM+ +C     A  VF
Sbjct: 3   ERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVF 62

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
            RM +R+V +WTA +     EGN + ++ L  EM   G+KP+   F   L AC   G+V 
Sbjct: 63  DRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVE 122

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            G  +   M    G     V     +D+  + G +G A  +   MP   N V W +++A 
Sbjct: 123 NGMQI-HGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWNAMIAG 180



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 17/247 (6%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           S  +G   +   + + KQ HC+ILK   G   S  + ++    + G  E    A++ F  
Sbjct: 313 SIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEE---AERLFSE 369

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
               N  S T+     +I GY   GLG +AI L+  +   GI  D+  +  +L+AC+ S 
Sbjct: 370 MQVRNVVSWTV-----MITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSG 424

Query: 153 AFGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSL 210
              E  +    +        ++    C+++  G  G + + + + + M  + N   W +L
Sbjct: 425 LIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTL 484

Query: 211 ICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
           + AC      ++ +E   + F M  +    N V  V + +  A+    +  +RV   +  
Sbjct: 485 LSACRVHGNLEIGREVGEILFRMDTD----NPVNYVMMSNIYAEAGYWKECERVRKLVKA 540

Query: 268 LGMKANA 274
            G+K  A
Sbjct: 541 KGLKKEA 547


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/756 (34%), Positives = 404/756 (53%), Gaps = 51/756 (6%)

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
           FG  P       +++   KSS      Q+   I     + D      +++ Y   GDI  
Sbjct: 43  FGFQPHAHILNRLIDVYCKSSELDYARQLFDEIS----EPDKIARTTMVSGYCASGDIAL 98

Query: 192 GRRVFDE--MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            R VF+E  +S R+ V + ++I   +  +    A+ LF +M  EG KP+  T   V++  
Sbjct: 99  ARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGL 158

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKCGA----VDTAKQLFGECK 301
           A + + E   + C       +K+ A  V    NALV +Y +C +    + +A+++F +  
Sbjct: 159 ALVVDDE---KQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIP 215

Query: 302 DRN--------------------------------LVLCNTIMSNYVRLGLAREALAILD 329
           +++                                LV  N ++S YV  GL +EAL ++ 
Sbjct: 216 EKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVR 275

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            M+  G   D  T  S + A A    L  G+  H YVLR     +    N+++ +Y KCG
Sbjct: 276 RMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSF-HFDNSLVTLYYKCG 334

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           K   A  IF+ M  K +VSWN+L++G + +G +  A+ +F EM  ++ +SW  M+ GL +
Sbjct: 335 KFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAE 394

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
               EE ++LF  M  E  +       G   +C  LGA    +  +A + K G    +  
Sbjct: 395 NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSA 454

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
             AL+ M+A+CG  + A QVFR M   D  +W A I A+   G+G +AV+++ EML++GI
Sbjct: 455 GNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGI 514

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           +PD I F+ VLTACSH GLV+QG   F SM  ++ + P   HY  ++DLL R+G   EA 
Sbjct: 515 RPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAE 574

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
            +I+S+P +P   IW +LL+ C+ H N+++   AA+++  L PE  G ++LLSN+YA+ G
Sbjct: 575 SIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATG 634

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
           +W  VARVR  M+++G++K    S IE+  +VH F   D SHPE   +   L+++   +R
Sbjct: 635 QWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMR 694

Query: 750 DAGYVPDLTNVLLDVD-EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
             GYVPD + VL DV+ +  K+ +L+ HSEK+A+AFGL+       IR+ KNLR C DCH
Sbjct: 695 RLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCH 754

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +F + +SKV  R+II+RD  RFH FR G CSC +FW
Sbjct: 755 NFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 149/610 (24%), Positives = 234/610 (38%), Gaps = 150/610 (24%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF----- 104
           QPH HIL +        +  V C  ++      L YA++ FD   + ++ + T       
Sbjct: 46  QPHAHILNR--------LIDVYCKSSE------LDYARQLFDEISEPDKIARTTMVSGYC 91

Query: 105 -----------------------MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
                                  MYN++I G+S    G  AI+L+ ++   G  PD FT+
Sbjct: 92  ASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTY 151

Query: 142 PFVLNACT-KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD----IVDGRRVF 196
             VL           + VQ H A +K G      V N L++ Y  C      +   R+VF
Sbjct: 152 ASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVF 211

Query: 197 DEMSERNVVSWTSLICACARR---DLPK-----------------------------EAV 224
           D++ E++  SWT+++    +    DL K                             EA+
Sbjct: 212 DDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEAL 271

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI---DELGMKANALMVNALV 281
            +   MV  GI+ +  T   VI ACA  + L+LG +V AY+   ++     +    N+LV
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFD----NSLV 327

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE----------- 330
            +Y KCG  + A+ +F +   ++LV  N ++S YV  G   EA  I  E           
Sbjct: 328 TLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387

Query: 331 --------------------MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
                               M   G  P       A+ + A LG    G+  H  +++ G
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIG 447

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
            +   S  N +I MY KCG  E A ++F  M     VSWN+LIA L ++G    A +V+ 
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYE 507

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
           E                               ML + I+ DR+T + V +AC + G +D 
Sbjct: 508 E-------------------------------MLKKGIRPDRITFLTVLTACSHAGLVDQ 536

Query: 491 AKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAM 548
            +  +  +E    I         L+D+  R G    A  +   +  K     W A +   
Sbjct: 537 GRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGC 596

Query: 549 AMEGNGEQAV 558
            + GN E  +
Sbjct: 597 RVHGNMELGI 606



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 204/476 (42%), Gaps = 83/476 (17%)

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +L+L   V   I   G + +A ++N L+D+Y K   +D A+QLF E  + + +   T++S
Sbjct: 29  SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88

Query: 314 NYVRLG---LAR------------------------------EALAILDEMLLHGPRPDR 340
            Y   G   LAR                               A+ +  +M   G +PD 
Sbjct: 89  GYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDD 148

Query: 341 VTMLSAVSASAQLGDLLCGRMC---HGYVLRNGLEGWDSICNTMIDMYMKCGKQ----EM 393
            T  S ++  A + D    + C   H   L++G     S+ N ++ +Y +C         
Sbjct: 149 FTYASVLAGLALVVD--DEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHS 206

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM-PGRDHISWNTMLGGLTQENM 452
           A ++FD +  K   SW +++ G +KNG  +  +E+   M      +++N M+ G     +
Sbjct: 207 ARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGL 266

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI---EKNGIHCDMQL 509
           ++EA+E+ R M+S  I++D  T   V  AC     L L K ++AY+   E    H D   
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFD--- 323

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA-------------------------- 543
             +LV ++ +CG    A  +F +M  +D+ +W A                          
Sbjct: 324 -NSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382

Query: 544 -----AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
                 I  +A  G GE+ ++LF+ M R+G +P    F G + +C+  G    G      
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQ 442

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +  I G    +     ++ +  + G++ EA  + ++MP   + V W +L+AA  +H
Sbjct: 443 LVKI-GFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALGQH 496



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 199/456 (43%), Gaps = 74/456 (16%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY-AQKAFDYYIKDNETSATLFM--- 105
           Q H   LK G G+  S  + +V   ++  +  SL + A+K FD   + +E S T  M   
Sbjct: 170 QFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGY 229

Query: 106 ------------------------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
                                   YN++I GY   GL  EA+ +   +   GI  D+FT+
Sbjct: 230 VKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTY 289

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD---- 197
           P V+ AC  +     G QVH  +++   D     +N L+  Y +CG   + R +F+    
Sbjct: 290 PSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPA 348

Query: 198 ---------------------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
                                      EM E+N++SW  +I   A     +E + LF  M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
             EG +P        I +CA L     G +  A + ++G  ++    NAL+ MY KCG V
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVV 468

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           + A+Q+F      + V  N +++   + G   EA+ + +EML  G RPDR+T L+ ++A 
Sbjct: 469 EEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTAC 528

Query: 351 AQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK- 404
           +  G +  GR     M   Y +  G + +      +ID+  + GK   A  I + +  K 
Sbjct: 529 SHAGLVDQGRKYFNSMETVYRIPPGADHY----ARLIDLLCRSGKFSEAESIIESLPFKP 584

Query: 405 TVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
           T   W +L++G   +G++E    +A ++F  +P  D
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 153/364 (42%), Gaps = 55/364 (15%)

Query: 336 PRPDRVTMLSAVSAS-------AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
           P PD V  ++   A+        +   L   R  HG ++  G +    I N +ID+Y K 
Sbjct: 3   PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKS 62

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP--GRDHISWNTMLGG 446
            + + A ++FD +S    ++  ++++G   +GD+  AR VF E P   RD + +N M+ G
Sbjct: 63  SELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITG 122

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK---WIYAYIEKNGI 503
            +  N    A+ LF  M  E  K D  T   V +  G    +D  K     +A   K+G 
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLA--GLALVVDDEKQCVQFHAAALKSGA 180

Query: 504 HCDMQLATALVDMFARCGDP----QRAMQVFRRMEKRDVSAWTAA-----------IGAM 548
                ++ ALV +++RC         A +VF  + ++D  +WT             +G  
Sbjct: 181 GYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKE 240

Query: 549 AMEGNGE---------------------QAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            ++G  E                     +A+E+   M+  GI+ D   +  V+ AC++  
Sbjct: 241 LLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANAR 300

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHY-GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           L+  G  +   +      S    H+   +V L  + G   EA  + + MP + + V W +
Sbjct: 301 LLQLGKQVHAYVLRREDFS---FHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNA 356

Query: 647 LLAA 650
           LL+ 
Sbjct: 357 LLSG 360


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 284/784 (36%), Positives = 421/784 (53%), Gaps = 78/784 (9%)

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F +NSLI   +       A++ +  +    +  + FTFP +L AC         +QVH  
Sbjct: 19  FHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAY 77

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER--NVVSWTSLICACARRDLPK 221
           + ++G   D F    L++ YG+CG      +VFDEM E   +VVSWT+LI A +      
Sbjct: 78  LTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVD 137

Query: 222 EAVYLFFEMV-------EEGIKPNSVTMVCVISACA---KLQNLELGDRVCAYIDELGMK 271
           EA   F  M         E    + V++  ++SACA       L  G  V   + + G  
Sbjct: 138 EAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFG 197

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
            +  + N++V MY  C  V  A ++F     + R++V  N+++S +   G A  AL   +
Sbjct: 198 VSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFE 257

Query: 330 EMLLHGP---RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG---LEGWDSICNT-MI 382
           +M+  G     P+RVT+++ + + A+LG +      H Y+       L   D +  T ++
Sbjct: 258 DMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALL 317

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DM+ +CG   +A  IFD +  K VV W+++IA                            
Sbjct: 318 DMHARCGNLALAREIFDGVEGKNVVCWSAMIA---------------------------- 349

Query: 443 MLGGLTQENMFEEAMELFRVMLSE------RIKVDRVTMVGVASACGYLGALDLAKWIYA 496
              G  Q +  EEA+ LFR ML E       +K + VT+V V +AC  LGA   A  I+ 
Sbjct: 350 ---GYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHK 406

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK--RDVSAWTAAIGAMAMEGNG 554
           Y    G+  D ++A+AL+DM A+CGD +   QVF  M++  R V +W++ IGA  + G G
Sbjct: 407 YAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEG 466

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           ++A+ELF+EM   G +P+ I ++ VL+ACSH GLV QG   F SM   +G+SP   HY C
Sbjct: 467 KRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYAC 526

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           +VDLLGRAG L EA ++I +MP++ +  +WGSLLAAC  H N  +     ++I  LD   
Sbjct: 527 LVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNS 586

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
            G HVLL+N+Y  AG+W +V R+R++++  G+RK+PG S IE+  +V+ F + D SHPE 
Sbjct: 587 VGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPES 646

Query: 735 NNISSMLREMNCRLRDAG-YVPDLTNVLLDVDEQEKKYLL---SHHSEKLAMAFGLI--- 787
             I   L  ++ R+R A  YV   T   L+V++ +   L+    +HSE+LA+AFGLI   
Sbjct: 647 EMIYKELDGLDERVRKAAKYV---TETGLNVEDGDIAGLILRCKYHSERLAIAFGLIMID 703

Query: 788 -------STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
                  S     PIR+ KNLR+C DCH++ KLVSKV DRE+IVRD +RFH FR G CSC
Sbjct: 704 RHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSC 763

Query: 841 SDFW 844
            D+W
Sbjct: 764 GDYW 767



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 229/517 (44%), Gaps = 96/517 (18%)

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           +S ++   W SLI   A ++ P+ A+  F  M    +  N+ T   ++ ACA L+ L   
Sbjct: 13  ISHKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR--NLVLCNTIMSNYV 316
            +V AY+  LG+ A+     ALVD Y KCG    A Q+F E  +   ++V    ++S Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 317 RLGLAREALAILDEM-LLHGPRP------DRVTMLSAVSASAQLGDLLCGRMC------- 362
             G   EA      M  + G         D V++ + VSA A    + CG  C       
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACA----VGCGSNCLRRGSAV 187

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNG 420
           HG V++ G      + N+M+ MY  C     A R+F+   +  + VVSWNSLI+G   NG
Sbjct: 188 HGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNG 247

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
           + E A   F                    E+M  E         +  ++ +RVT++ +  
Sbjct: 248 EAERALRTF--------------------EDMVSEG--------TSAVEPNRVTVIALLK 279

Query: 481 ACGYLGALDLAKWIYAYIEKNG----IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
           +C  LG ++ + W++ YI        +  D+ + TAL+DM ARCG+   A ++F  +E +
Sbjct: 280 SCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGK 339

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG------IKPDSIVFVGVLTACSHGGL-- 588
           +V  W+A I         E+A+ LF +ML +G      +KP+++  V V+ ACS  G   
Sbjct: 340 NVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASR 399

Query: 589 -------------VNQGWHLFRSMTDI--------HG---------VSPQIVHYGCMVDL 618
                        ++Q   +  ++ D+        HG          +  +V +  M+  
Sbjct: 400 SASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGA 459

Query: 619 LGRAGLLGEALDLIKSMPV---EPNDVIWGSLLAACQ 652
            G  G    AL+L   M     EPN++ + S+L+AC 
Sbjct: 460 EGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACS 496


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 298/896 (33%), Positives = 459/896 (51%), Gaps = 106/896 (11%)

Query: 5   LNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTL----------NELKQPHCH 54
           LNP+     T ++  L + +K  T+  ++    S +  ++L           E ++ H  
Sbjct: 68  LNPNQ---CTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQ 124

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
            +K G        + ++    ++G   S   AQK FD     N     L  +  LI GY+
Sbjct: 125 SIKYGFVGNLFLSNTLINIYVRIGDLGS---AQKLFDEMSNRN-----LVTWACLISGYT 176

Query: 115 CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG--EGVQVHGAIVKMGFDRD 172
             G   EA + + ++   G +P+ + F   L AC +S   G   GVQ+HG I K  +  D
Sbjct: 177 QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 236

Query: 173 VFVENCLINFYGECGDIV-DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           V V N LI+ YG C D   D R VFD +  RN +SW S+I   +RR     A  LF  M 
Sbjct: 237 VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ 296

Query: 232 EEGI----KPNSVTMVCVISACAKLQNLELGDR----VCAYIDELGMKANALMV-NALVD 282
           +EG+    KPN         A ++   LE G R    V A++   G+  N + + N LV+
Sbjct: 297 KEGLGFSFKPND--------AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 348

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMS--------------------------NYV 316
           MY K GA+  A  +F    +++ V  N+++S                          N V
Sbjct: 349 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSV 408

Query: 317 RLGLA------REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
              L+       +A+    +M+  G    RVT ++ +SA + L         H  VL+  
Sbjct: 409 IGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYC 468

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           L    +I N ++  Y KCG+     +IF  MS                            
Sbjct: 469 LSDDTAIGNALLSCYGKCGEMNECEKIFARMSET-------------------------- 502

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
               RD +SWN+M+ G     +  +AM+L   M+ +  ++D  T   + SAC  +  L+ 
Sbjct: 503 ----RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLER 558

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
              ++A   +  +  D+ + +ALVDM+++CG    A + F  M  R+V +W + I   A 
Sbjct: 559 GMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYAR 618

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G+GE+A++LF  M+  G  PD + FVGVL+ACSH G V +G+  F+SM++++ +SP++ 
Sbjct: 619 HGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVE 678

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH--QNVDIAAYAAERIT 668
           H+ CMVDLLGRAG L E  D I SMP++PN +IW ++L AC +   +N ++   AAE + 
Sbjct: 679 HFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLL 738

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           EL+P+ +  +VLL+N+YAS  KW +VA+ R  MKE  ++K  G S + +   VH F +GD
Sbjct: 739 ELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGD 798

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           + HPE + I   LRE+N ++RDAGY+P     L D++ + K+ LLS+HSEK+A+AF L  
Sbjct: 799 KLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTR 858

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            S  +PIR++KNLR+C DCHS    +SK+  R+I++RD+NRFH F  G CSC D+W
Sbjct: 859 QS-ALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/790 (33%), Positives = 419/790 (53%), Gaps = 80/790 (10%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +L +++     L +    ++F     VH  ++  GF       N L+  Y +  ++V  R
Sbjct: 9   LLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYAR 68

Query: 194 RVFDEMSERNVVSWTSLI---CACARRDLPKE---------------------------- 222
           ++F+E+   + ++ T+LI   CA    +L +E                            
Sbjct: 69  QLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDG 128

Query: 223 --AVYLFFEMVEEGIKPNSVTMVCVISACAKL--QNLELGDRVCAYIDELGMK-ANALMV 277
             A+ LF  M  +  +P+  T   V+SA         + G   CA + + GM   ++ ++
Sbjct: 129 HSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVV-KTGMGCVSSSVL 187

Query: 278 NALVDMYMK--------CGAVDTAKQLFGECKDRNLVLCNTIMSNYVR------------ 317
           NAL+ +Y+K        C A+ +A++LF E   R+ +   T+++ YVR            
Sbjct: 188 NALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE 247

Query: 318 -----LGLA--------------REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
                LG A              +EAL +  +M   G + D +T  + +SA A +G    
Sbjct: 248 AMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQM 307

Query: 359 GRMCHGYVLRNGLEGWDSIC----NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           G+  H Y+L+N L    S C    N +I +Y K  K + A +IF  M  + +++WN++++
Sbjct: 308 GKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILS 367

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G +  G +E A+  F EMP ++ ++   M+ GL Q    +E ++LF+ M  +  +     
Sbjct: 368 GYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFA 427

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
             G  +AC  LGAL+  + ++A +   G    + +  A++ M+A+CG  + A  VF  M 
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
             D+ +W + I A+   G+G +A+ELF++ML++G+ PD I F+ VLTACSH GLV +G H
Sbjct: 488 SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRH 547

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F SM + +G++P   HY  MVDL  RAG+   A  +I SMP +P   +W +LLA C+ H
Sbjct: 548 YFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIH 607

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
            N+D+   AAE++ +L P+  G +VLLSNIYA  G+W  VA+VR  M++Q +RK P  S 
Sbjct: 608 GNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSW 667

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           IEV  KVH F   D+ HPE+ ++   L ++   ++  GY+PD   VL D++ ++K++ LS
Sbjct: 668 IEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALS 727

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
            HSEKLA+ FG++       +RV KN+R+C DCH+  K +SKV  REIIVRD  RFH F+
Sbjct: 728 THSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFK 787

Query: 835 QGSCSCSDFW 844
            G CSC D+W
Sbjct: 788 NGDCSCRDYW 797



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 208/460 (45%), Gaps = 73/460 (15%)

Query: 50  QPHCHILKQGLGHKPSYI-----SKVVCTCAQMG-TFESLTYAQKAFDYYIKDNETSATL 103
           Q HC ++K G+G   S +     S  V   +++G +  ++  A+K FD   K +E + T 
Sbjct: 169 QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTT 228

Query: 104 FM--------------------------YNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
            +                          +N++I GY   G   EA++L  ++   GI  D
Sbjct: 229 MITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFD 288

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD----VFVENCLINFYGECGDIVDGR 193
             T+  +++AC    +F  G QVH  I+K   + +    + V N LI  Y +   + + R
Sbjct: 289 DITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEAR 348

Query: 194 RVFDEMSERNVVSW-------------------------------TSLICACARRDLPKE 222
           ++F  M  RN+++W                               T +I   A+     E
Sbjct: 349 KIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDE 408

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + LF +M  +G +P        ++AC+ L  LE G ++ A +  LG +++  + NA++ 
Sbjct: 409 GLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMIS 468

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG V+ A+ +F      +LV  N++++   + G   +A+ + D+ML  G  PDR+T
Sbjct: 469 MYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRIT 528

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
            L+ ++A +  G +  GR     +L + G+   +     M+D++ + G    A  + D M
Sbjct: 529 FLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSM 588

Query: 402 SNKTVVS-WNSLIAGLIKNGD----VESAREVFSEMPGRD 436
            +K     W +L+AG   +G+    +E+A ++F  MP  D
Sbjct: 589 PSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQND 628


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/641 (38%), Positives = 361/641 (56%), Gaps = 48/641 (7%)

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG-----AVDTAKQLFGEC 300
           +S  +K  +L+   ++ A I + G+  + L+   L+   + C      A+  A +LF   
Sbjct: 6   VSLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLL---LHCAITISDALHYALRLFHHF 62

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEM--LLHGP--RPDRVTMLSAVSASAQLGDL 356
            + +  + NT++ +   L L++  L+ L     L   P   PD  T   A+ A A    L
Sbjct: 63  PNPDTFMHNTLIRS---LSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHL 119

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G   H    R+G +    +  T+I MY +CG    A R+FD MS   VV+WN+++   
Sbjct: 120 RPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAA 179

Query: 417 IKNGDVESA-------------------------------REVFSEMPGRDHISWNTMLG 445
            + GDVE A                               R VF EMP RD +SW+TM+ 
Sbjct: 180 FRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIV 239

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
           G      F+EA   FR +L E I+ + V++ GV SAC   GA +  K ++ ++EK G   
Sbjct: 240 GFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLY 299

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
              +  AL+D +++CG+   A  VF+ M   R + +WT+ I  +AM G GE+A++LF+EM
Sbjct: 300 VGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEM 359

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
              G++PD I F+ +L ACSH GLV +G  LF  M +++G+ P I HYGCMVDL GRA  
Sbjct: 360 EESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAAR 419

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L +A + I  MPV PN +IW +LL AC  H N+++A     R+ E+DP+ SG HVLLSN+
Sbjct: 420 LQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNV 479

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YA AGKW +V+ +R  M E  ++K PG S IE++  ++ F +G++ +         LRE+
Sbjct: 480 YAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREI 539

Query: 745 NCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
             RLR +AGY P L +VL D++E+EK+  +S HSEKLA AFG+    K   +R+VKNLR+
Sbjct: 540 MLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRV 599

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH+  KL+SKVY  EIIVRD +RFH F+ G CSC D+W
Sbjct: 600 CGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 239/539 (44%), Gaps = 82/539 (15%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L  C +L   KQ H  I K GL   P    K++  CA +   ++L YA + F ++   + 
Sbjct: 9   LSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCA-ITISDALHYALRLFHHFPNPDT 67

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEG 157
                FM+N+LIR  S     + ++  +++L     L PD FTF F L A   S     G
Sbjct: 68  -----FMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPG 122

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           +Q+H    + GFD  +FV   LI+ Y ECGD    RRVFDEMSE NVV+W +++ A  R 
Sbjct: 123 IQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRC 182

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
              + A  +F                     C  ++NL                      
Sbjct: 183 GDVEGAQDVF--------------------GCMPVRNLT-------------------SW 203

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N ++  Y K G +  A+++F E   R+ V  +T++  +   G   EA     E+L    R
Sbjct: 204 NGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIR 263

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            + V++   +SA AQ G    G++ HG+V + G     S+ N +ID Y KCG   MA  +
Sbjct: 264 TNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLV 323

Query: 398 FDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           F +M   +++VSW S+IAGL  +G  E                               EA
Sbjct: 324 FQNMPVARSIVSWTSIIAGLAMHGCGE-------------------------------EA 352

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVD 515
           ++LF  M    ++ D +T + +  AC + G ++    +++ ++   GI   ++    +VD
Sbjct: 353 IQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVD 412

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           ++ R    Q+A +    M    +   W   +GA ++ GN E A EL    L + + PD+
Sbjct: 413 LYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMA-ELVKARLAE-MDPDN 469


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/609 (38%), Positives = 357/609 (58%), Gaps = 37/609 (6%)

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           +N+ +V  L+       ++D A  +F      NL + N ++           +++    M
Sbjct: 70  SNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLM 129

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN-TMIDMYMKCGK 390
           L    RPDR+T+   + + A L D+  GR  HG V++ GLE +DS    +++DMY+K G+
Sbjct: 130 LRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE-FDSFVRVSLVDMYVKIGE 188

Query: 391 QEMACRIFDH-----------------------------------MSNKTVVSWNSLIAG 415
                ++FD                                    M  +   SWNSLI G
Sbjct: 189 LGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLING 248

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
            ++NGD++ ARE+F +MP ++ +SW TM+ G +Q    E+A+ +F  ML E ++ + +T+
Sbjct: 249 FVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTV 308

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
           V    AC  +GAL + + I+ Y+  NG   +  + TALVDM+A+CG+ + A +VF   + 
Sbjct: 309 VSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKG 368

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
           +D+  W+  I   A+ G  +QA++ F +M   GI PD ++F+ +LTACSH G V+QG + 
Sbjct: 369 KDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNF 428

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           F SM   + + P + HY  +VDLLGRAG L EAL  I+SMP+ P+ VIWG+L  AC+ H+
Sbjct: 429 FESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHK 488

Query: 656 NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
           N+++A   AE++ +L+P+  G +V LSN+YA+ G+W +V RVR  MK +G+ K PG S I
Sbjct: 489 NIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYI 548

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           EV G+VH F +GD +H     IS  L E+    +  GY+P+   VL +++E+EK+  L  
Sbjct: 549 EVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGS 608

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+AFGLIST+    IR+VKNLR+C DCHS  K  SK+  REII+RD  RFH F+ 
Sbjct: 609 HSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKD 668

Query: 836 GSCSCSDFW 844
           G+CSC D+W
Sbjct: 669 GTCSCGDYW 677



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 201/467 (43%), Gaps = 79/467 (16%)

Query: 30  PKDSPS---IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  SP    I  +    TL +L Q H  I    L      +++++ +   +   +SL YA
Sbjct: 35  PSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSL---KSLDYA 91

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
              F  +   N     LF++N+LIRG +       ++S +V +    I PD+ T PFVL 
Sbjct: 92  LSIFRCFDHPN-----LFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLK 146

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE-------- 198
           +       G G  +HG ++K+G + D FV   L++ Y + G++  G ++FDE        
Sbjct: 147 SVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAE 206

Query: 199 ---------------------------MSERNVVSWTSLICACARR-DLPK--------- 221
                                      M ERN  SW SLI    R  DL +         
Sbjct: 207 SILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMP 266

Query: 222 ---------------------EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
                                +A+ +F+ M+EEG++PN +T+V  + AC K+  L++G+R
Sbjct: 267 EKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGER 326

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           +  Y+   G + N  +  ALVDMY KCG + +A ++F E K ++L+  + ++  +   G 
Sbjct: 327 IHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGC 386

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSICN 379
             +AL    +M   G  PD V  L+ ++A +  G++  G        L   +E       
Sbjct: 387 FDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYT 446

Query: 380 TMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESA 425
            ++D+  + G+ + A      M  N   V W +L      + ++E A
Sbjct: 447 LIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMA 493



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 142/325 (43%), Gaps = 27/325 (8%)

Query: 391 QEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
            ++  +IF H   SN  VV+   LI+       ++ A  +F      +   +N ++ GL 
Sbjct: 57  HQIHAQIFLHNLFSNSRVVT--QLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLA 114

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           + + FE ++  F +ML   I+ DR+T+  V  +   L  + L + ++  + K G+  D  
Sbjct: 115 ENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSF 174

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRD----VSAWTAAIGAMAMEGNGEQAVELFNEM 564
           +  +LVDM+ + G+    +Q+F    +R+    +  W   I      G+  +A  LF  M
Sbjct: 175 VRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAM 234

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
             +    ++  +  ++      G +++   LF  M +       +V +  M++   + G 
Sbjct: 235 PER----NAGSWNSLINGFVRNGDLDRARELFVQMPE-----KNVVSWTTMINGFSQNGD 285

Query: 625 LGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIAA----YAAERITELDPEKSGV 677
             +AL +   M    V PND+   S L AC K   + +      Y +    +L+    G+
Sbjct: 286 HEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLN---RGI 342

Query: 678 HVLLSNIYASAGKWTNVARVRLQMK 702
              L ++YA  G   + +RV ++ K
Sbjct: 343 GTALVDMYAKCGNIKSASRVFVETK 367


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/672 (36%), Positives = 383/672 (56%), Gaps = 68/672 (10%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF+ + E N + W  +    A    P  A+ L+  M+  G+ PN  T   ++ +CAK + 
Sbjct: 31  VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGA------------------------- 289
            + G ++  ++ +LG   +  +  +L+ MY + G                          
Sbjct: 91  FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150

Query: 290 ------VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
                 +++A+++F E   +++V  N ++S Y   G  ++AL +  EM+    +PD  TM
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            + VSA AQ G +  GR  H ++  +G      I N +ID+Y KCG              
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCG-------------- 256

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                            +VE+A E+   +  +D ISWNT++GG T  N+++EA+ LF+ M
Sbjct: 257 -----------------EVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEM 299

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN----GIHCDMQLATALVDMFAR 519
           L      + VTM+ +  AC +LGA+D+ +WI+ YI+K      +     L T+L+DM+A+
Sbjct: 300 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAK 359

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           CGD   A QV       R +S W A I   AM G    A ++F+ M + GI+PD I FVG
Sbjct: 360 CGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVG 419

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L+ACSH G+++ G ++FRSM   + ++P++ HYGCM+DLLG +GL  EA ++I +MP+E
Sbjct: 420 LLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME 479

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+ VIW SLL AC+ H N+++    A+++ +++PE  G +VLLSNIYA+AGKW  V ++R
Sbjct: 480 PDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIR 539

Query: 699 LQMKEQGI-RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
             + ++G+ +K+PG SSIE++  VHEF  GD+ HP+   I  ML EM   L +AG+VPD 
Sbjct: 540 TLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDT 599

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
           + VL +++E+ K+  L HHSEKLA+AFGLIST     + +VKNLR+C +CH   KL+SK+
Sbjct: 600 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 659

Query: 818 YDREIIVRDNNR 829
           Y REII RD  R
Sbjct: 660 YKREIIARDRTR 671



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/545 (30%), Positives = 285/545 (52%), Gaps = 78/545 (14%)

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
           S+++  C     F+ L YA   F+   + N+      ++N + RG++     V A+ LYV
Sbjct: 10  SQLLEFCILSPHFDGLPYAISVFETIPEPNQ-----LIWNIMFRGHALSSDPVSALKLYV 64

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +   G+LP+ FTFPF+L +C KS  F EG Q+HG ++K+GFD D++V   LI+ Y + G
Sbjct: 65  VMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNG 124

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARR-----------DLP---------------- 220
            + D ++VFD  S R+VVS+T+LI   A R           ++P                
Sbjct: 125 RLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAE 184

Query: 221 ----KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
               K+A+ LF EM++  +KP+  TM  V+SACA+  ++ELG +V ++I++ G  +N  +
Sbjct: 185 TGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKI 244

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           VNAL+D+Y KCG V+TA +L     +++++  NT++  Y  + L +EAL +  EML  G 
Sbjct: 245 VNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 304

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG-----WDSICNTMIDMYMKCGKQ 391
            P+ VTMLS + A A LG +  GR  H Y+ +  L+G       S+  ++IDMY KCG  
Sbjct: 305 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK-LKGVVVTNASSLRTSLIDMYAKCGDI 363

Query: 392 EMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
           + A ++ D  + N+++ +WN++I G   +G   +A ++FS M                ++
Sbjct: 364 DAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRM----------------RK 407

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQL 509
           N  E                D +T VG+ SAC + G LDL + I+  + ++  I   ++ 
Sbjct: 408 NGIEP---------------DDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEH 452

Query: 510 ATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
              ++D+    G  + A ++   M  + D   W + + A  + GN E       ++++  
Sbjct: 453 YGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK-- 510

Query: 569 IKPDS 573
           I+P++
Sbjct: 511 IEPEN 515



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 202/406 (49%), Gaps = 38/406 (9%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  +F    + N ++ N +   +        AL +   M+  G  P+  T    + + A+
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
                 G+  HG+VL+ G +    +  ++I MY + G+ E A ++FD  S++ VVS+ +L
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I G    G +ESA+++F E+P +D +SWN M+ G  +   +++A+ELF+ M+   +K D 
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            TM  V SAC   G+++L + ++++I  +G   ++++  AL+D++++CG+ + A ++   
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +  +DV +W   IG        ++A+ LF EMLR G  P+ +  + +L AC+H G ++ G
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 327

Query: 593 -W-HLF-----------------RSMTDIHG------VSPQIVH----------YGCMVD 617
            W H++                  S+ D++        +PQ+            +  M+ 
Sbjct: 328 RWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIF 387

Query: 618 LLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIA 660
                G    A D+   M    +EP+D+ +  LL+AC     +D+ 
Sbjct: 388 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 433



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 198/425 (46%), Gaps = 47/425 (11%)

Query: 39  LKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK+C   KT  E +Q H H+LK G        + ++   AQ G  E    AQK FD    
Sbjct: 82  LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLED---AQKVFDRSSH 138

Query: 96  DNETSATLFM--------------------------YNSLIRGYSCIGLGVEAISLYVEL 129
            +  S T  +                          +N++I GY+  G   +A+ L+ E+
Sbjct: 139 RDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEM 198

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
               + PD+ T   V++AC +S +   G QVH  I   GF  ++ + N LI+ Y +CG++
Sbjct: 199 MKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEV 258

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                + + +S ++V+SW +LI      +L KEA+ LF EM+  G  PN VTM+ ++ AC
Sbjct: 259 ETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 318

Query: 250 AKLQNLELGDRVCAYIDE----LGMKANALMVNALVDMYMKCGAVDTAKQLFGECK-DRN 304
           A L  +++G  +  YID+    + +   + +  +L+DMY KCG +D A Q+      +R+
Sbjct: 319 AHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRS 378

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR---- 360
           L   N ++  +   G A  A  I   M  +G  PD +T +  +SA +  G L  GR    
Sbjct: 379 LSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFR 438

Query: 361 -MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIK 418
            M   Y +   LE +      MID+    G  + A  + + M      V W SL+     
Sbjct: 439 SMRQDYNITPKLEHY----GCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKI 494

Query: 419 NGDVE 423
           +G++E
Sbjct: 495 HGNLE 499


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/617 (38%), Positives = 354/617 (57%), Gaps = 42/617 (6%)

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           ++ N+ +   L+  Y     V +A+++F E  +RN+++ N ++ +YV  G   E + +  
Sbjct: 70  LRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFG 129

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            M     RPD  T    + A +  G ++ GR  HG   + GL     + N ++ MY KCG
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCG 189

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV--------------------- 428
               A  + D MS + VVSWNSL+ G  +N   + A EV                     
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249

Query: 429 ----------------FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
                           F +M  +  +SWN M+G   +  M  EA+EL+  M ++  + D 
Sbjct: 250 AVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           V++  V  ACG   AL L K I+ YIE+  +  ++ L  AL+DM+A+CG  ++A  VF  
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN 369

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M+ RDV +WTA I A    G G  AV LF+++   G+ PDSI FV  L ACSH GL+ +G
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F+ MTD + ++P++ H  CMVDLLGRAG + EA   I+ M +EPN+ +WG+LL AC+
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACR 489

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H + DI   AA+++ +L PE+SG +VLLSNIYA AG+W  V  +R  MK +G++K PG+
Sbjct: 490 VHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 549

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           S++EVN  +H F  GD SHP+ + I   L  +  ++++ GYVPD  + L DV+E++K+  
Sbjct: 550 SNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETH 609

Query: 773 LSHHSEKLAMAFGLISTSK-----TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           L+ HSEKLA+ F L++T +        IR+ KNLR+C DCH  AKL+S++  REII+RD 
Sbjct: 610 LAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDT 669

Query: 828 NRFHFFRQGSCSCSDFW 844
           NRFH FR G CSC D+W
Sbjct: 670 NRFHVFRFGVCSCGDYW 686



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/506 (23%), Positives = 209/506 (41%), Gaps = 97/506 (19%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           +  L+  H  I+ + L    S   K++   A +    S   A+K FD   + N     + 
Sbjct: 55  IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVAS---ARKVFDEIPERN-----VI 106

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA--CTKSSAFGEGVQ--- 159
           + N +IR Y   G   E + ++  + G  + PD +TFP VL A  C+ +   G  +    
Sbjct: 107 IINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166

Query: 160 ----------VHGAIVKM----GF------------DRDVFVENCLINFYGECGDIVDGR 193
                     V   +V M    GF             RDV   N L+  Y +     D  
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226

Query: 194 RV-------------------------------------FDEMSERNVVSWTSLICACAR 216
            V                                     F +M ++++VSW  +I    +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
             +P EAV L+  M  +G +P++V++  V+ AC     L LG ++  YI+   +  N L+
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            NAL+DMY KCG ++ A+ +F   K R++V    ++S Y   G   +A+A+  ++   G 
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHG-----YVLRNGLEGWDSICNTMIDMYMKCGKQ 391
            PD +  ++ ++A +  G L  GR C       Y +   LE        M+D+  + GK 
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL----ACMVDLLGRAGKV 462

Query: 392 EMACRIFDHMS---NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTML 444
           + A R    MS   N+ V  W +L+     + D +    +A ++F   P  +   +  +L
Sbjct: 463 KEAYRFIQDMSMEPNERV--WGALLGACRVHSDTDIGLLAADKLFQLAP--EQSGYYVLL 518

Query: 445 GGL-TQENMFEEAMELFRVMLSERIK 469
             +  +   +EE   +  +M S+ +K
Sbjct: 519 SNIYAKAGRWEEVTNIRNIMKSKGLK 544



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 4/170 (2%)

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           + +++ I    + C+  L   L+  +A   D   A +VF  + +R+V      I +    
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G   + V++F  M    ++PD   F  VL ACS  G +  G  +  S T + G+S  +  
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFV 177

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
              +V + G+ G L EA  ++  M     DV+ W SL+    ++Q  D A
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEM--SRRDVVSWNSLVVGYAQNQRFDDA 225


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/651 (37%), Positives = 378/651 (58%), Gaps = 40/651 (6%)

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           +V SW S+I   AR     EA+  F  M +  + P   +  C I AC+ L ++  G +  
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                 G +++  + +AL+ MY  CG ++ A+++F E   R++V   +++  Y   G A 
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159

Query: 323 EALAILDEMLLHGPRPDRVTML------SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           +A+++  ++L+     D    L      S +SA +++         H +V++ G +   S
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219

Query: 377 ICNTMIDMYMKCGKQEMAC--RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
           + NT++D Y K G+  +A   +IFD + +K  VS+NS+++   ++G              
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG-------------- 265

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVASACGYLGALDLAKW 493
                            M  EA E+FR ++  + +  + +T+  V  A  + GAL + K 
Sbjct: 266 -----------------MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+  + + G+  D+ + T+++DM+ +CG  + A + F RM+ ++V +WTA I    M G+
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
             +A+ELF  M+  G++P+ I FV VL ACSH GL  +GW  F +M    GV P + HYG
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVDLLGRAG L +A DLI+ M ++P+ +IW SLLAAC+ H+NV++A  +  R+ ELD  
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSS 488

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
             G ++LLS+IYA AG+W +V RVR+ MK +G+ K PG S +E+NG+VH F  GDE HP+
Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQ 548

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I   L E+N +L +AGYV + ++V  DVDE+EK+  L  HSEKLA+AFG+++T    
Sbjct: 549 REKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS 608

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            + VVKNLR+C DCH+  KL+SK+ DRE +VRD  RFH F+ G CSC D+W
Sbjct: 609 TVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 234/484 (48%), Gaps = 56/484 (11%)

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F+ Y+   +    +F +NS+I   +  G   EA+  +  +    + P + +FP  + AC+
Sbjct: 32  FNRYVDKTD----VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS 87

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
                  G Q H      G+  D+FV + LI  Y  CG + D R+VFDE+ +R++VSWTS
Sbjct: 88  SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTS 147

Query: 210 LICACARRDLPKEAVYLFFEMV------EEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +I          +AV LF +++      ++ +  +S+ +V VISAC+++    L + + +
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207

Query: 264 YIDELGMKANALMVNALVDMYMKC--GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
           ++ + G      + N L+D Y K   G V  A+++F +  D++ V  N+IMS Y + G++
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQL------GDLLCGRMCHGYVLRNGLEGWD 375
            EA  +   ++      ++V   +A++ S  L      G L  G+  H  V+R GLE   
Sbjct: 268 NEAFEVFRRLV-----KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +  ++IDMY KCG+ E A + FD M NK V SW ++IAG   +G               
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA------------- 369

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWI 494
                              +A+ELF  M+   ++ + +T V V +AC + G  ++  +W 
Sbjct: 370 ------------------AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            A   + G+   ++    +VD+  R G  Q+A  + +RM+ K D   W++ + A  +  N
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471

Query: 554 GEQA 557
            E A
Sbjct: 472 VELA 475



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 7/200 (3%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H  ++K+G     S  + ++   A+ G    +  A+K FD  +  +  S     YNS++ 
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGE-GGVAVARKIFDQIVDKDRVS-----YNSIMS 259

Query: 112 GYSCIGLGVEAISLYVELAGFGILP-DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFD 170
            Y+  G+  EA  ++  L    ++  +  T   VL A + S A   G  +H  +++MG +
Sbjct: 260 VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE 319

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
            DV V   +I+ Y +CG +   R+ FD M  +NV SWT++I          +A+ LF  M
Sbjct: 320 DDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379

Query: 231 VEEGIKPNSVTMVCVISACA 250
           ++ G++PN +T V V++AC+
Sbjct: 380 IDSGVRPNYITFVSVLAACS 399


>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
 gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 595

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/560 (41%), Positives = 343/560 (61%), Gaps = 3/560 (0%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +  A+++F      N  + N I+  Y        A     +ML      +  T    +
Sbjct: 36  GDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLL 95

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A   L  +      HG V++ G        N ++ +Y  CG+   A ++FD++  +  V
Sbjct: 96  RACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAV 155

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SWN +I G IK+GDV++A  VF +MP ++ +SW +++ GL +     EA+ L   M +  
Sbjct: 156 SWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAG 215

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
            ++D V +  + +AC  LGALD  +W++ Y+  NG+  D  +  ALV+M+ +CGD + A+
Sbjct: 216 FELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEAL 275

Query: 528 QVFRRME--KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
            VF +++  ++DV  WTA I   A+ G G +A+E FN M R+GI+P+SI F  VL ACS+
Sbjct: 276 SVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSY 335

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
           GGLV +G  LF+SM   + V+P I HYGCMVDLLGR+G L EA +LIK MP++P+ VIWG
Sbjct: 336 GGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWG 395

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC  H++  + +     + E+D + SG ++ L+ I A+ GKW   A VRL+MK  G
Sbjct: 396 ALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLG 455

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR-DAGYVPDLTNVLLDV 764
           +   PG SS+ +NG VHEF +G + HP+M  I   L+++  RLR D GY P   ++LLD+
Sbjct: 456 VPISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDL 515

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           + +EK+  ++ HSEKLA+AFGLI+T     IRV+KNLR+C DCH+ AKLVS++Y REII+
Sbjct: 516 ENEEKETAMAQHSEKLAIAFGLINTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIM 575

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD  RFH FR GSCSC D+W
Sbjct: 576 RDRVRFHHFRDGSCSCKDYW 595



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 202/436 (46%), Gaps = 74/436 (16%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISK--VVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           + +LKQ    ++K  +  +P   +K   +CT   +G    L YAQ+ F+       TS  
Sbjct: 1   MKQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVG---DLLYAQRVFN-----GITSPN 52

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            FM+N++IR YS       A   Y ++    +  + +TFPF+L AC    A GE +QVHG
Sbjct: 53  TFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHG 112

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-------------------- 202
            ++K+GF  DVF  N L++ Y  CG+I   R++FD + ER                    
Sbjct: 113 LVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKT 172

Query: 203 -----------NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
                      NVVSWTSLI          EA+ L +EM   G + + V +  +++ACA 
Sbjct: 173 AYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACAN 232

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK--DRNLVLCN 309
           L  L+ G  +  Y+   G+  + ++  ALV+MY+KCG ++ A  +FG+ K   +++ +  
Sbjct: 233 LGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWT 292

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++  +   G   EAL   + M   G RP+ +T  + + A +           +G ++  
Sbjct: 293 AMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACS-----------YGGLVEE 341

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G E + S         MKC           +  N ++  +  ++  L ++G ++ A+E+ 
Sbjct: 342 GKELFKS---------MKCF----------YNVNPSIEHYGCMVDLLGRSGRLDEAKELI 382

Query: 430 SEMPGR-DHISWNTML 444
            +MP +   + W  +L
Sbjct: 383 KKMPMKPSAVIWGALL 398


>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 355/589 (60%), Gaps = 7/589 (1%)

Query: 263 AYIDELGMKANALMVNALVDMYMKC--GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           A++   G+  + +  N L+ + +    G++  A QLF +    ++ + NT++  +  +  
Sbjct: 36  AHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPT 95

Query: 321 A-REALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           +   ++ I   M+ + G  P+R T +    A      +L G     + ++ GLE    + 
Sbjct: 96  SSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVT 155

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N MI MY   G  + A R+FD   ++ + SWN +I G + +G++  A+E+F EM  RD +
Sbjct: 156 NAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVV 215

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SW T++ G  Q   F+EA++LF  ML      +  T+    +AC  L ALD  +WI+ YI
Sbjct: 216 SWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYI 275

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME--KRDVSAWTAAIGAMAMEGNGEQ 556
           +K+ I  + +L  +L+DM+A+CG+   A +VF      K  V  W A IG  AM G  ++
Sbjct: 276 DKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKE 335

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A++LF +M  + + P+ + FV +L ACSHG LV +G   F+SM   +G+ P+I HYGCMV
Sbjct: 336 AIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMV 395

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
           DLLGR+GLL EA + + +MP+ P+  IWG+LL AC+ H++++      + I ELD +  G
Sbjct: 396 DLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIG 455

Query: 677 VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
            HVLL+N+Y+++G+W     VR +++  G +K PG SSIE+NG  H+F  GD SHP+   
Sbjct: 456 CHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQ 515

Query: 737 ISSMLREMNCRLRDAGYVPDLTNVLLDV-DEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
           +   L EM  +L++AGYVP+   VLLD+ DE++K+  LS HSEKLA+AFGLI+T     I
Sbjct: 516 LYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAI 575

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+VKNLR+C DCH   K +SKVY REIIVRD  R+H F+ G CSC D+W
Sbjct: 576 RIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 224/454 (49%), Gaps = 55/454 (12%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           SL++CK++N++KQ H H++  GL   P   +K++       +F SL+YA + FD   K +
Sbjct: 21  SLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIA-SSFGSLSYAHQLFDQIPKPD 79

Query: 98  ETSATLFMYNSLIRGYSCIGLGVE-AISLYVELAGF-GILPDKFTFPFVLNACTKSSAFG 155
                +F+YN++I+ ++ I      ++ +++ +    G LP+++TF FV  AC       
Sbjct: 80  -----VFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVL 134

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD------------------ 197
           EG Q+    +K+G + ++FV N +I  Y   G + + RRVFD                  
Sbjct: 135 EGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYV 194

Query: 198 -------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
                        EMSER+VVSWT++I    +    KEA+ LF EM++ G  PN  T+  
Sbjct: 195 GSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLAS 254

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
            ++ACA L  L+ G  +  YID+  +K N  ++ +L+DMY KCG +D A ++F +     
Sbjct: 255 ALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLK 314

Query: 305 LVL--CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-- 360
           L +   N ++  Y   G ++EA+ + ++M +    P++VT ++ ++A +    +  GR  
Sbjct: 315 LKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGY 374

Query: 361 ---MCHGYVLRNGLEGWDSICNTMIDMYMKCG-KQEMACRIFDHMSNKTVVSWNSLIAGL 416
              M   Y +   +E +      M+D+  + G  +E    +F+         W +L+   
Sbjct: 375 FKSMASSYGIEPEIEHY----GCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGAC 430

Query: 417 IKNGDVESAR---EVFSEMPGRDHISWNTMLGGL 447
             + D+E  +   ++  E+   DHI  + +L  L
Sbjct: 431 RIHKDIERGQRIGKIIKELDS-DHIGCHVLLANL 463


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/544 (42%), Positives = 322/544 (59%), Gaps = 33/544 (6%)

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R +  C    S Y+R  LAR  + +   ML     P++ T    + A      +  G+  
Sbjct: 57  RVIKFCAISKSGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQI 116

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H +VL+ G        N +I MY                     V++ SL          
Sbjct: 117 HAHVLKFGFGADGFSLNNLIHMY---------------------VNFQSL---------- 145

Query: 423 ESAREVFSEMPGRDH--ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
           E AR VF  MP RD   +SWN M+    Q N   EA  LF  M  E + +D+     + S
Sbjct: 146 EQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLS 205

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC  LGAL+  KWI+ YIEK+GI  D +LAT ++DM+ +CG  ++A +VF  + ++ +S+
Sbjct: 206 ACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISS 265

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W   IG +AM G GE A+ELF EM R+ + PD I FV VL+AC+H GLV +G H F+ MT
Sbjct: 266 WNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMT 325

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           ++ G+ P + H+GCMVDLLGRAGLL EA  LI  MPV P+  + G+L+ AC+ H N ++ 
Sbjct: 326 EVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELG 385

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
               +++ EL+P  SG +VLL+N+YASAG+W +VA+VR  M ++G++K PG S IE    
Sbjct: 386 EQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESG 445

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           V EF +G  +HP+   I + L E+   +R  GYVPD   VL D+DE+EK+  L +HSEKL
Sbjct: 446 VDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKL 505

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+AFGL+ T     +R+ KNLR+C DCH  +KL+SKVYDREII+RD NRFH FR G CSC
Sbjct: 506 AIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSC 565

Query: 841 SDFW 844
            D+W
Sbjct: 566 KDYW 569



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 185/417 (44%), Gaps = 62/417 (14%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           + L++C   S   E  Q H  I+++G   D      +I F   C            +S+ 
Sbjct: 25  YGLDSC---STMAELKQYHSQIIRLGLSADNDAMGRVIKF---CA-----------ISKS 67

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
             + W           L +  ++++  M+ + + PN  T   +I AC     +E G ++ 
Sbjct: 68  GYLRW----------QLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 117

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC--KDRNLVLCNTIMSNYVRLGL 320
           A++ + G  A+   +N L+ MY+   +++ A+++F     +DRN V  N +++ YV+   
Sbjct: 118 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNR 177

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             EA A+ D M L     D+    S +SA   LG L  G+  HGY+ ++G+E    +  T
Sbjct: 178 LHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATT 237

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMY KCG  E A  +F+ +  K + SWN +I GL  +G  E+A E+F EM        
Sbjct: 238 VIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEME------- 290

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-E 499
                                    E +  D +T V V SAC + G ++  K  + Y+ E
Sbjct: 291 ------------------------REMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTE 326

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
             G+   M+    +VD+  R G  + A ++   M    D     A +GA  + GN E
Sbjct: 327 VLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTE 383



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 189/427 (44%), Gaps = 52/427 (12%)

Query: 10  LVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISK 69
           L+ A+P   +    HK        P  G L +C T+ ELKQ H  I++ GL      + +
Sbjct: 6   LLQASPPSLSSAKAHKL-------PLYG-LDSCSTMAELKQYHSQIIRLGLSADNDAMGR 57

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           V+  CA   +             Y++       +FMY+ ++                   
Sbjct: 58  VIKFCAISKSG------------YLRWQLARNCIFMYSRMLHK----------------- 88

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
               + P+KFT+P ++ AC    A  EG Q+H  ++K GF  D F  N LI+ Y     +
Sbjct: 89  ---SVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSL 145

Query: 190 VDGRRVFDEMSE--RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
              RRVFD M +  RN VSW ++I A  + +   EA  LF  M  E +  +      ++S
Sbjct: 146 EQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLS 205

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC  L  LE G  +  YI++ G++ ++ +   ++DMY KCG ++ A ++F E   + +  
Sbjct: 206 ACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISS 265

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV- 366
            N ++      G    A+ +  EM      PD +T ++ +SA A  G +  G+    Y+ 
Sbjct: 266 WNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMT 325

Query: 367 ----LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGD 421
               L+ G+E +      M+D+  + G  E A ++ + M  N       +L+     +G+
Sbjct: 326 EVLGLKPGMEHF----GCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGN 381

Query: 422 VESAREV 428
            E   ++
Sbjct: 382 TELGEQI 388


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/662 (35%), Positives = 395/662 (59%), Gaps = 6/662 (0%)

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           GD+     +FD++ E ++ +WT LI    +   PK+A+ ++  ++   ++P+   ++ V 
Sbjct: 25  GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            ACA   +L +  ++     + G   + ++ NAL+DM+ KC  V+ A+ +F +   +++V
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
              ++   YV  G+ R+ + +  EM L+G R + +T+ S + A A    L  GR  HG++
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL--GREVHGFI 202

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           LRN +EG   + + +++MY      + A  +FD M ++ +VSWN ++     N + E   
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262

Query: 427 EVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
            +F +M       +  SWN  + G  Q    E A+ +   M    IK +R+T+V     C
Sbjct: 263 GLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGC 322

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             L +L   K I+ Y+ ++    D+ + TALV ++A+CGD + +  VF  M ++DV AW 
Sbjct: 323 TNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWN 382

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
             I A +M G G +++ LFN+ML  G++P+S+ F+GVL+ CSH  L ++G  +F SM+  
Sbjct: 383 TMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSE 442

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           H ++P   HY CMVD+L RAG L EA D I+ MP+EP    WG+LL AC+ ++NV++   
Sbjct: 443 HSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTL 502

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA ++ E++P+ +G +VLLSNI  +A KW   + +R  M+++G+ K PG S ++V  KV+
Sbjct: 503 AASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVY 562

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F +GD+S+ + + I   L E++ ++R  GY P+   VL +VD+++++  L  HSE+LA+
Sbjct: 563 SFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAV 622

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFG++++S    +RV KNLR+C DCH+  KL++K+   +IIVRD+ RFH FR G C+C+D
Sbjct: 623 AFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCND 682

Query: 843 FW 844
           FW
Sbjct: 683 FW 684



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 226/507 (44%), Gaps = 77/507 (15%)

Query: 63  KPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEA 122
           +P    K++ TC   G  +           Y+ D      L  +  LI G++  G   +A
Sbjct: 10  QPCQSIKLIKTCLNSGDLKRA--------LYLFDKIPEPDLRTWTILISGHTQHGFPKKA 61

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
           I +Y  L    + PDKF    V  AC  S       ++H   ++ GF++D+ + N LI+ 
Sbjct: 62  IDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDM 121

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           +G+C  +   R VFD+M  ++VVSWTS+        + ++ + LF EM   GI+ NS+T+
Sbjct: 122 FGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTV 181

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
             ++ ACA    ++LG  V  +I    M+ N  + +ALV+MY     +  A+ +F     
Sbjct: 182 SSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYH 239

Query: 303 RNLVLCNTIMSNYVR-------LGLARE----------------------------ALAI 327
           R++V  N +++ Y         LGL  +                            AL I
Sbjct: 240 RDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGI 299

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           L +M   G +P+R+T++SA+     L  L  G+  HGYV R+      +I   ++ +Y K
Sbjct: 300 LCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAK 359

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  E++  +F+ M  K VV+WN++I                + M G+         GG 
Sbjct: 360 CGDLELSRHVFNTMPRKDVVAWNTMIMA--------------NSMHGK---------GG- 395

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCD 506
                  E++ LF  ML   ++ + VT +GV S C +    D    ++  +  ++ I  D
Sbjct: 396 -------ESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPD 448

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRM 533
               + +VD+ +R G  + A    R+M
Sbjct: 449 ADHYSCMVDVLSRAGRLEEAYDFIRKM 475



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 92/173 (53%)

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           LI   + +GD++ A  +F ++P  D  +W  ++ G TQ    ++A++++  +LS  ++ D
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           +  ++ VA AC   G L +AK I+    + G + D+ L  AL+DMF +C     A  VF 
Sbjct: 77  KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            M  +DV +WT+        G   Q + LF EM   GI+ +S+    +L AC+
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA 189


>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 354/608 (58%), Gaps = 8/608 (1%)

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD---TAKQLF 297
           TM C +  C+K + L+   ++ A + + G+  ++  +   +   +   + D    A+ +F
Sbjct: 17  TMSC-LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
                 +  L N ++  +        +L +   ML      +  T  S + A + L    
Sbjct: 73  DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
                H  + + G E      N++I+ Y   G  ++A  +FD +     VSWNS+I G +
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
           K G ++ A  +F +M  ++ ISW TM+ G  Q +M +EA++LF  M +  ++ D V++  
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
             SAC  LGAL+  KWI++Y+ K  I  D  L   L+DM+A+CG+ + A++VF+ ++K+ 
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           V AWTA I   A  G+G +A+  F EM + GIKP+ I F  VLTACS+ GLV +G  +F 
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           SM   + + P I HYGC+VDLLGRAGLL EA   I+ MP++PN VIWG+LL AC+ H+N+
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           ++     E +  +DP   G +V  +NI+A   KW   A  R  MKEQG+ K+PG S+I +
Sbjct: 433 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL 492

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD-VDEQEKKYLLSHH 776
            G  HEF +GD SHPE+  I S  R M  +L + GYVP+L  +LLD VD+ E++ ++  H
Sbjct: 493 EGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQH 552

Query: 777 SEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           SEKLA+ +GLI T     IR++KNLR+C DCH   KL+SK+Y R+I++RD  RFH FR G
Sbjct: 553 SEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDG 612

Query: 837 SCSCSDFW 844
            CSC D+W
Sbjct: 613 KCSCGDYW 620



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 211/431 (48%), Gaps = 46/431 (10%)

Query: 35  SIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           ++  L+ C    ELKQ H  +LK GL      I+K +  C    + + L YAQ  FD + 
Sbjct: 17  TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
           + +      F++N +IRG+SC      ++ LY  +       + +TFP +L AC+  SAF
Sbjct: 77  RPD-----TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 131

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD----------------- 197
            E  Q+H  I K+G++ DV+  N LIN Y   G+      +FD                 
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191

Query: 198 --------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
                         +M+E+N +SWT++I    + D+ KEA+ LF EM    ++P++V++ 
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
             +SACA+L  LE G  + +Y+++  ++ ++++   L+DMY KCG ++ A ++F   K +
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA-----QLGDLLC 358
           ++     ++S Y   G  REA++   EM   G +P+ +T  + ++A +     + G L+ 
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLI 417
             M   Y L+  +E +  I    +D+  + G  + A R    M  K   V W +L+    
Sbjct: 372 YSMERDYNLKPTIEHYGCI----VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427

Query: 418 KNGDVESAREV 428
            + ++E   E+
Sbjct: 428 IHKNIELGEEI 438


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/763 (32%), Positives = 411/763 (53%), Gaps = 75/763 (9%)

Query: 157 GVQVHGAIVKMGFDR-DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           G+ +HG ++K G D  D  V +  + FYG C  +    ++FDEM +R+ ++W  ++    
Sbjct: 6   GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           R    ++AV LF EM   G K    TMV ++  C+  +    G ++  Y+  LG+++N  
Sbjct: 66  RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           M N+L+ MY + G ++ ++++F   KDRNL   N+I+S+Y +LG   +A+ +LDEM + G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185

Query: 336 PRPDRVTMLSAVS-----------------------------------ASAQLGDLLCGR 360
            +PD VT  S +S                                   A A+ G L  G+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL---- 416
             HGY+LRN L     +  T+IDMY+K G    A  +FD M  K +V+WNSL++GL    
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305

Query: 417 -IKN------------------------------GDVESAREVFSEMPGR----DHISWN 441
            +K+                              G  E A +V  +M  +    + +SW 
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            +  G ++   F  A+++F  M  E +  +  TM  +    G L  L   K ++ +  + 
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            + CD  +ATALVDM+ + GD Q A+++F  ++ + +++W   +   AM G GE+ +  F
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           + ML  G++PD+I F  VL+ C + GLV +GW  F  M   +G+ P I H  CMVDLLGR
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           +G L EA D I++M ++P+  IWG+ L++C+ H+++++A  A +R+  L+P  S  ++++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
            N+Y++  +W +V R+R  M+   +R     S I+++  VH F +  ++HP+  +I   L
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
            ++   ++ +GYVPD + +  D+ + EK+ LL  H+EKLAM +GLI      PIRVVKN 
Sbjct: 666 YKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNT 725

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +C D H+ AK +S + +REI++++  R H FR G CSC+D W
Sbjct: 726 NICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 186/449 (41%), Gaps = 74/449 (16%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NSL+ GY+  GL  +AI++   +   G+ P   +   +L A  +      G  +HG I+
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +     DV+VE  LI+ Y + G +   R VFD M  +N+V+W SL+   +   L K+A  
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L   M +EGIKP+++T                                    N+L   Y 
Sbjct: 313 LMIRMEKEGIKPDAITW-----------------------------------NSLASGYA 337

Query: 286 KCGAVDTAKQLFGECKDR----NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
             G  + A  + G+ K++    N+V    I S   + G  R AL +  +M   G  P+  
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           TM + +     L  L  G+  HG+ LR  L     +   ++DMY K G  + A  IF  +
Sbjct: 398 TMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI 457

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
            NK++ SWN ++ G                M GR                  EE +  F 
Sbjct: 458 KNKSLASWNCMLMGY--------------AMFGRG-----------------EEGIAAFS 486

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQLATALVDMFAR 519
           VML   ++ D +T   V S C   G +    W Y  + ++  GI   ++  + +VD+  R
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQ-EGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
            G    A    + M  K D + W A + +
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSS 574


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/722 (34%), Positives = 386/722 (53%), Gaps = 42/722 (5%)

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
           +E AG  + P  +   F   AC K  +  +G   H  + +   +   F+EN ++  Y +C
Sbjct: 1   MEDAGISVSPRSYKCLF--EACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKC 58

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G + D R+VFDEM ERN+VSW ++I A A   +  +   +F  M+E   KPN  T +  +
Sbjct: 59  GSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFL 118

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            +      LE+G ++ ++    G+ +NA +  A+ +MY+KCG ++ A+ +F +  ++N V
Sbjct: 119 RSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAV 178

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
               IM  Y +     +ALA+  +M+  G   D       + A A L +L  GR  HG++
Sbjct: 179 AWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHI 238

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           ++ GLE   S+   ++D Y+KC   E A + F+ +S                        
Sbjct: 239 VKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEP---------------------- 276

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
                    + +SW+ ++ G  Q   FEEA++ F  + +  + ++  T   +  AC  L 
Sbjct: 277 ---------NDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALA 327

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
             +     +A   K+ +       +A++ M++RCG    A +VF  ++  D  AWTA I 
Sbjct: 328 DFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIA 387

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
             A +GN  +A++LF  M   G++P+++ F+ VLTACSH GLV +G     SM+  +GV+
Sbjct: 388 GYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVA 447

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
             I HY CMVD+  RAG L EAL+LI+SMP  P+ + W  LL  C  ++N++I   AAE 
Sbjct: 448 TTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAEN 507

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
           + +LDPE +  ++L+ N+YAS GKW   A VR  M E+ +RK    S I V GKVH F  
Sbjct: 508 LFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIV 567

Query: 727 GDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ----EKKYLLSHHSEKLAM 782
           GD+ HP+   I S L  +N  +     + + T +L + D      E+K  L  HSE+LA+
Sbjct: 568 GDKHHPQTEEIYSKLEALNDSV-----IKEETGLLTEEDVSNSLPERKEQLLVHSERLAL 622

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGLIST  + P+ V KNLR C DCH F K VS +  REI+VRD+ RFH F+ G CSC+D
Sbjct: 623 AFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCND 682

Query: 843 FW 844
           +W
Sbjct: 683 YW 684



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 232/513 (45%), Gaps = 51/513 (9%)

Query: 56  LKQGLGHKPSYIS----KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           +++ + + P ++     K+ C C       SL  A+K FD   + N     L  +N++I 
Sbjct: 36  MQRTVKNPPEFLENSVLKMYCKCG------SLADARKVFDEMRERN-----LVSWNTIIS 84

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
            Y+  G+  +   ++  +      P+  T+   L +    S    G Q+H   ++ G   
Sbjct: 85  AYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGS 144

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           +  V   + N Y +CG +     VF++MSE+N V+WT ++    + +   +A+ LF +MV
Sbjct: 145 NASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMV 204

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            EG++ +      V+ ACA L+ L  G ++  +I +LG+++   +   LVD Y+KC  ++
Sbjct: 205 NEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLE 264

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
           +A + F    + N V  + +++ Y ++G   EAL   + +       +  T  S   A +
Sbjct: 265 SATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACS 324

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            L D   G   H   +++ L  +    + MI MY +CG+ + A R+F+ + +   V+W +
Sbjct: 325 ALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTA 384

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           +IAG    G+                                 EA++LFR M    ++ +
Sbjct: 385 IIAGYAYQGNA-------------------------------PEALKLFRRMQDCGVRPN 413

Query: 472 RVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
            VT + V +AC + G  ++  +++ +     G+   +     +VD+++R G  Q A+++ 
Sbjct: 414 AVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELI 473

Query: 531 RRME-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
           R M    D  +W   +G      N   GE A E
Sbjct: 474 RSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAE 506



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 213/460 (46%), Gaps = 25/460 (5%)

Query: 20  LTNQHKAKTTPKDSPSIG---SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQ 76
            +N  + +T P  S  IG   SL N   L   KQ H H ++ GLG   S  + +     +
Sbjct: 99  FSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVK 158

Query: 77  MGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP 136
            G  E    A+  F+   + N  + T  M      GY+     ++A++L+ ++   G+  
Sbjct: 159 CGWLEG---AELVFEKMSEKNAVAWTGIMV-----GYTQAERQMDALALFAKMVNEGVEL 210

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D++ F  VL AC        G Q+HG IVK+G + +V V   L++FY +C ++    + F
Sbjct: 211 DEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAF 270

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           + +SE N VSW++LI    +    +EA+  F  +    +  NS T   +  AC+ L +  
Sbjct: 271 EWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFN 330

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
            G +  A   +  + A     +A++ MY +CG +D A ++F    D + V    I++ Y 
Sbjct: 331 SGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYA 390

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGL 371
             G A EAL +   M   G RP+ VT ++ ++A +  G ++ GR     M   Y +   +
Sbjct: 391 YQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTI 450

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG--LIKNGDV-ESARE 427
           + +D     M+D+Y + G  + A  +   M  +   +SW  L+ G    +N ++ E A E
Sbjct: 451 DHYD----CMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAE 506

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
              ++   D   +  M         ++EA  + R M++ER
Sbjct: 507 NLFQLDPEDTAGYILMFNLYASFGKWKEAANV-RKMMAER 545


>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/577 (40%), Positives = 348/577 (60%), Gaps = 4/577 (0%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G+ ++  +   L   Y   G +D +  L G  KD   +   + +  +   GL    LA+L
Sbjct: 51  GLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALL 110

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            +ML  G  P   T+ +++ A   L     GR  H Y  +  L G   +   ++ MY + 
Sbjct: 111 SDMLSEGLLPTAHTLSASLPACRGLS---LGRALHAYAFKLALSGDSYVATALLSMYARA 167

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G    A  +FD M +  VVS  +++      G ++ AR +F  +P +D I WN M+ G T
Sbjct: 168 GDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYT 227

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDM 507
           Q     EA++LFR ML    + D VT+V V SA   LG ++  KW+++Y++ +  +  ++
Sbjct: 228 QHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNV 287

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
           ++ATALVDM+ +CG  + A+ VF  +  +D+  W A I   AM G+  +A+E+F ++  Q
Sbjct: 288 RVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQ 347

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G+ P  I F+G+L ACSH GLV +G   F+SM   +G+ P+I HYGCMVDLLGRAGL+ E
Sbjct: 348 GLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEE 407

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A  L++S+ + P+ V+W SLLAAC+ H+N+ +    A+ +       SG+++LLSNIYA+
Sbjct: 408 AFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAA 467

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
            GKW  VARVR  MK  GI+K PG S+IE++ KV+EF +GD SHP  + I +ML +MN  
Sbjct: 468 VGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNAL 527

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +++ G+VP    VL D+DE  K+  L+ HSEKLA+AFGLIS+     I++VKNLR C DC
Sbjct: 528 VKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSDC 587

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H+  KL+SK+  R+I+ RD NRFH F  GSC+C D+W
Sbjct: 588 HAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 191/447 (42%), Gaps = 57/447 (12%)

Query: 8   SPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYI 67
           S  VL +    + +  H    T   + S+  L  C T     + H  ++++GL    +  
Sbjct: 2   SAAVLPSVAPASDSGGHHGALTADRAASL--LAACSTARRASELHAAVVRKGLDSDRAVA 59

Query: 68  SKVVCTCAQMGTFE-SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLY 126
            ++    A  G  + SLT   +  D          T   Y S I  +S  GL +  ++L 
Sbjct: 60  FRLQRAYAASGRLDHSLTLLGRTKD---------PTTIFYTSAIHAHSSRGLHLPGLALL 110

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY--- 183
            ++   G+LP   T    L AC   S    G  +H    K+    D +V   L++ Y   
Sbjct: 111 SDMLSEGLLPTAHTLSASLPACRGLSL---GRALHAYAFKLALSGDSYVATALLSMYARA 167

Query: 184 ----------------------------GECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
                                          G + D RR+FD +  ++ + W ++I    
Sbjct: 168 GDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYT 227

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANA 274
           +   P EA+ LF  M+    +P+ VT+V V+SA A+L  +E G  + +Y+ +   ++ N 
Sbjct: 228 QHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNV 287

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            +  ALVDMY KCG+++ A  +F    ++++V+ N +++ Y   G +R+AL +  ++   
Sbjct: 288 RVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQ 347

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           G  P  +T +  ++A +  G +  GR     M H Y +   +E +      M+D+  + G
Sbjct: 348 GLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHY----GCMVDLLGRAG 403

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAG 415
             E A  +   ++     V W SL+A 
Sbjct: 404 LIEEAFHLVQSLTITPDAVMWVSLLAA 430



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 36/187 (19%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           + ++N++I GY+  G   +A+ ++V+L   G+ P   TF  +LNAC+ S    EG     
Sbjct: 318 IVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQ 377

Query: 163 AIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           ++  + G D  +    C+++  G  G                               L +
Sbjct: 378 SMEHEYGIDPKIEHYGCMVDLLGRAG-------------------------------LIE 406

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA +L   +    I P++V  V +++AC   +N+ LG R+  ++   G+ AN+ M   L 
Sbjct: 407 EAFHLVQSLT---ITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGL-ANSGMYILLS 462

Query: 282 DMYMKCG 288
           ++Y   G
Sbjct: 463 NIYAAVG 469


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/810 (33%), Positives = 444/810 (54%), Gaps = 54/810 (6%)

Query: 48  LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYN 107
           L+Q  C I K GL       S +V   A+ G   SL+YA+K F+    +   + TL   N
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG---SLSYARKVFNQM--ETRNAVTL---N 278

Query: 108 SLIRGYSCIGLGVEAISLYVELAG-FGILPDKFTF---PFVLNACTKSSAFGEGVQVHGA 163
            L+ G      G EA  L++++     + P+ +      F   +  +     +G +VHG 
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGH 338

Query: 164 IVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
           ++  G  D  V + N L+N Y +CG I D RRVF  M++++ VSW S+I    +     E
Sbjct: 339 VITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIE 398

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           AV  +  M    I P S T++  +S+CA L+  +LG ++     +LG+  N  + NAL+ 
Sbjct: 399 AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMT 458

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA-REALAILDEMLLHGPRPDRV 341
           +Y + G ++  +++F    + + V  N+I+    R   +  EA+         G + +R+
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRI 518

Query: 342 TMLSAVSASAQ--LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           T  S +SA +    G+L  G+  HG  L+N +    +  N +I  Y KCG          
Sbjct: 519 TFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIACYGKCG---------- 566

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQENMFEEAME 458
                                +++   ++FS M  R D+++WN+M+ G     +  +A++
Sbjct: 567 ---------------------EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALD 605

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           L   ML    ++D      V SA   +  L+    ++A   +  +  D+ + +ALVDM++
Sbjct: 606 LVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYS 665

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFV 577
           +CG    A++ F  M  R+  +W + I   A  G GE+A++LF  M   G   PD + FV
Sbjct: 666 KCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFV 725

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           GVL+ACSH GL+ +G+  F SM+D +G++P+I H+ CM D+LGRAG L +  D I+ MP+
Sbjct: 726 GVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPM 785

Query: 638 EPNDVIWGSLLAAC--QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           +PN +IW ++L AC     +  ++   AAE + +L+PE +  +VLL N+YA+ G+W ++ 
Sbjct: 786 KPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLV 845

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           + R +MK+  ++K  G S + +   VH F +GD+SHP+ + I   L+E+N ++RDAGYVP
Sbjct: 846 KARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVP 905

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST-SKTMPIRVVKNLRLCCDCHSFAKLV 814
                L D++++ K+ +LS+HSEKLA+AF L +  S T+PIR++KNLR+C DCHS  K +
Sbjct: 906 QTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYI 965

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SK+  R+II+RD+NRFH F+ G+CSCSDFW
Sbjct: 966 SKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 232/503 (46%), Gaps = 39/503 (7%)

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           H  + K   D+DV++ N LIN Y E GD V  R+VFDEM  RN VSW  ++   +R    
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL--GDRVCAYIDELGMKANALMVN 278
           KEA+    +MV+EGI  N    V V+ AC ++ ++ +  G ++   + +L    +A++ N
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143

Query: 279 ALVDMYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
            L+ MY KC G+V  A   FG+ + +N V  N+I+S Y + G  R A  I   M   G R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203

Query: 338 PDRVTMLSAVSASAQLGD----LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           P   T  S V+ +  L +    LL   MC   + ++GL     + + ++  + K G    
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCT--IQKSGLLTDLFVGSGLVSAFAKSGSLSY 261

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++F+ M  +  V+ N L+ GL++    E A ++F +M                  +M 
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-----------------NSMI 304

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM-QLATA 512
           + + E + ++LS   +      VG          L   + ++ ++   G+   M  +   
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVG----------LKKGREVHGHVITTGLVDFMVGIGNG 354

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           LV+M+A+CG    A +VF  M  +D  +W + I  +   G   +AVE +  M R  I P 
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
           S   +  L++C+       G  +      + G+   +     ++ L    G L E   + 
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYLNECRKIF 473

Query: 633 KSMPVEPNDVIWGSLLAACQKHQ 655
            SMP E + V W S++ A  + +
Sbjct: 474 SSMP-EHDQVSWNSIIGALARSE 495



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 154/594 (25%), Positives = 267/594 (44%), Gaps = 63/594 (10%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           A + T +S++ A+K FD     N  S     +  ++ GYS  G   EA+    ++   GI
Sbjct: 45  AYLETGDSVS-ARKVFDEMPLRNCVS-----WACIVSGYSRNGEHKEALVFLRDMVKEGI 98

Query: 135 LPDKFTFPFVLNACTKSSAFG--EGVQVHGAIVKMGFDRDVFVENCLINFYGEC-GDIVD 191
             +++ F  VL AC +  + G   G Q+HG + K+ +  D  V N LI+ Y +C G +  
Sbjct: 99  FSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM-VCVISACA 250
               F ++  +N VSW S+I   ++    + A  +F  M  +G +P   T    V +AC+
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218

Query: 251 KLQ-NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             + ++ L +++   I + G+  +  + + LV  + K G++  A+++F + + RN V  N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278

Query: 310 TIMSNYVRLGLAREALAILDEM--LLHGPRPDRVTMLSAV---SASAQLGDLLCGRMCHG 364
            +M   VR     EA  +  +M  ++       V +LS+    S + ++G L  GR  HG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHG 337

Query: 365 YVLRNGLEGW-DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
           +V+  GL  +   I N +++MY KCG                                + 
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCG-------------------------------SIA 366

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
            AR VF  M  +D +SWN+M+ GL Q   F EA+E ++ M    I     T++   S+C 
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
            L    L + I+    K GI  ++ ++ AL+ ++A  G      ++F  M + D  +W +
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486

Query: 544 AIGAMAM-EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
            IGA+A  E +  +AV  F    R G K + I F  VL+A S       G         I
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG-------KQI 539

Query: 603 HG------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           HG      ++ +      ++   G+ G +     +   M    ++V W S+++ 
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 201/430 (46%), Gaps = 47/430 (10%)

Query: 30  PKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P     I SL +C +L   K   Q H   LK G+    S  + ++   A+ G    L   
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY---LNEC 469

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV-EAISLYVELAGFGILPDKFTFPFVL 145
           +K F    + ++ S     +NS+I   +     + EA+  ++     G   ++ TF  VL
Sbjct: 470 RKIFSSMPEHDQVS-----WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524

Query: 146 NACTKSSAFGE-GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-N 203
           +A   S +FGE G Q+HG  +K     +   EN LI  YG+CG++    ++F  M+ER +
Sbjct: 525 SA-VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
            V+W S+I      +L  +A+ L + M++ G + +S     V+SA A +  LE G  V A
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA 643

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
                 ++++ ++ +ALVDMY KCG +D A + F     RN    N+++S Y R G   E
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEE 703

Query: 324 ALAILDEMLLHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           AL + + M L G   PD VT +  +SA +  G           +L  G + ++S    M 
Sbjct: 704 ALKLFETMKLDGQTPPDHVTFVGVLSACSHAG-----------LLEEGFKHFES----MS 748

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI-SWN 441
           D Y       +A RI +H S    V        L + G+++   +   +MP + ++  W 
Sbjct: 749 DSY------GLAPRI-EHFSCMADV--------LGRAGELDKLEDFIEKMPMKPNVLIWR 793

Query: 442 TMLGGLTQEN 451
           T+LG   + N
Sbjct: 794 TVLGACCRAN 803



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 35/230 (15%)

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
            R  H  + +N L+    +CN +I+ Y++ G    A ++FD M  +  VSW  +++G  +
Sbjct: 20  ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           NG+                                +EA+   R M+ E I  ++   V V
Sbjct: 80  NGE-------------------------------HKEALVFLRDMVKEGIFSNQYAFVSV 108

Query: 479 ASACGYLGALDL--AKWIYAYIEKNGIHCDMQLATALVDMFARC-GDPQRAMQVFRRMEK 535
             AC  +G++ +   + I+  + K     D  ++  L+ M+ +C G    A+  F  +E 
Sbjct: 109 LRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEV 168

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG-VLTACS 584
           ++  +W + I   +  G+   A  +F+ M   G +P    F   V TACS
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 3/117 (2%)

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           V +  V S  G+ GA   A++ ++ + KN +  D+ L   L++ +   GD   A +VF  
Sbjct: 5   VPLSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDE 61

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           M  R+  +W   +   +  G  ++A+    +M+++GI  +   FV VL AC   G V
Sbjct: 62  MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/602 (39%), Positives = 358/602 (59%), Gaps = 38/602 (6%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+  Y   G    A+ +F    +RN++  N ++ +Y+   L  +AL +  +M+  G  PD
Sbjct: 73  LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPD 132

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T    + A +   +L  G   HG V + GL+    + N +I +Y KCG    A  + D
Sbjct: 133 HYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLD 192

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG------------------------- 434
            M +K VVSWNS++AG  +N   + A ++  EM G                         
Sbjct: 193 EMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENV 252

Query: 435 ------------RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                       +  +SWN M+    + +M  ++++L+  M    ++ D +T   V  AC
Sbjct: 253 LYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRAC 312

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           G L AL L + I+ Y+E+  +  +M L  +L+DM+ARCG  + A +VF RM+ RDV++WT
Sbjct: 313 GDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWT 372

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + I A  M G G  AV LF EM   G  PDSI FV +L+ACSH GL+N+G   F+ MTD 
Sbjct: 373 SLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDD 432

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           + ++P I H+ C+VDLLGR+G + EA ++IK MP++PN+ +WG+LL++C+ + N+DI   
Sbjct: 433 YKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGIL 492

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA+++ +L PE+SG +VLLSNIYA AG+WT V  +R  MK + IRK+PG S++E+N +VH
Sbjct: 493 AADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVH 552

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F +GD  HP+   I   L  +  ++++ GYVP   + L DV+E++K+  L+ HSEKLA+
Sbjct: 553 TFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAI 612

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
            F +++T ++ PIR+ KNLR+C DCH  AKL+SK+  REI++RD NRFH F+ G CSC D
Sbjct: 613 VFAILNTQES-PIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGD 671

Query: 843 FW 844
           +W
Sbjct: 672 YW 673



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 240/571 (42%), Gaps = 81/571 (14%)

Query: 5   LNP-SPLVLATPTVTTLTNQHKAKTTPKDSPSI------GSLKNCKTLNELKQPHCHILK 57
           +NP  PL    P +  L +  +       +P +        L     +  LK  H  +  
Sbjct: 1   MNPFHPLTHQFPKLQALVSSIRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFN 60

Query: 58  QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
                 PS   K++   A  G       A+  FD   + N     +  YN +IR Y    
Sbjct: 61  LSFHENPSLGIKLMRAYAARG---EPGLARNVFDVIPERN-----VIFYNVMIRSYMNNH 112

Query: 118 LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
           L  +A+ ++ ++   G  PD +T+P VL AC+ S     G+Q+HGA+ K+G D ++FV N
Sbjct: 113 LYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGN 172

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
            LI  YG+CG + + R V DEM  ++VVSW S++   A+     +A+ +  EM     KP
Sbjct: 173 GLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKP 232

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           ++ TM  ++ A     +                  N L V                +++F
Sbjct: 233 DACTMASLLPAVTNTSS-----------------ENVLYV----------------EEMF 259

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
              + ++LV  N ++S Y++  +  +++ +  +M      PD +T  S + A   L  LL
Sbjct: 260 MNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALL 319

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            GR  H YV R  L     + N++IDMY +CG  E A R+FD M  + V SW SLI+   
Sbjct: 320 LGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYG 379

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
             G   +A  +F+EM                                      D +  V 
Sbjct: 380 MTGQGYNAVALFTEMQNSGQ-------------------------------SPDSIAFVA 408

Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-K 535
           + SAC + G L+  K+ +  +  +  I   ++    LVD+  R G    A  + ++M  K
Sbjct: 409 ILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMK 468

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
            +   W A + +  +  N +  +   +++L+
Sbjct: 469 PNERVWGALLSSCRVYSNMDIGILAADKLLQ 499



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 4/170 (2%)

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K +++ +     H +  L   L+  +A  G+P  A  VF  + +R+V  +   I +    
Sbjct: 52  KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
              + A+ +F +M+  G  PD   +  VL ACS    +  G  L  ++  + G+   +  
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKV-GLDLNLFV 170

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
              ++ L G+ G L EA  ++  M  +  DV+ W S++A   ++   D A
Sbjct: 171 GNGLIALYGKCGCLPEARCVLDEM--QSKDVVSWNSMVAGYAQNMQFDDA 218


>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/562 (41%), Positives = 353/562 (62%), Gaps = 17/562 (3%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML--LHGPRPDRVTMLS 345
           G +D A  +F   +  N  +   ++  +       E+L +   ML  L+       ++ S
Sbjct: 55  GGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPS 114

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A  +L     GR  HG VL+  L     + N+M+ MY+  G+ E+A R+FD M N+ 
Sbjct: 115 VLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRD 174

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           VVSWNS+IAG +K G++E A E+F EMP RD +S N M+ G  +E            MLS
Sbjct: 175 VVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKE------------MLS 222

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ-LATALVDMFARCGDPQ 524
             ++ D   +V V SA   LG ++  KW++AY+  N I      + +AL+DM+++CG  +
Sbjct: 223 LGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIE 282

Query: 525 RAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
            A  VFR +  +R++  W + I  +A+ G   +A+++F EM R  I+P+ I F+G+L+ C
Sbjct: 283 NAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTC 342

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SHGGLV +G   F SM + + + P+I HYGCM+DL GRAG L +AL +I++MP E + + 
Sbjct: 343 SHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLA 402

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           W ++L+A  KH +++I   AA R  EL P+ S  +VLLSNIYA AG+W +VA++RL M++
Sbjct: 403 WKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQ 462

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN-NISSMLREMNCRLRDAGYVPDLTNVLL 762
           +G++K+ G SS+ VNGKVHEF  G E     +  + + + E+  RL+  GY PDLT VLL
Sbjct: 463 RGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLL 522

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           D++++ K+ LL+ HSEK+A+AFGLI  +K+ PI +VKNLR+CCDCH F KLVSKVY+R+I
Sbjct: 523 DIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQI 582

Query: 823 IVRDNNRFHFFRQGSCSCSDFW 844
           I+RD NRFH F  G CSC+++W
Sbjct: 583 IMRDQNRFHHFENGCCSCNEYW 604



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 210/431 (48%), Gaps = 44/431 (10%)

Query: 28  TTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           T    +P +  L  CK+L EL+Q H  ++K  L +    +S+++  C+  G    L YA 
Sbjct: 2   TAISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYAS 61

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG-----FGILPDKFTFP 142
             F      N      F++ +LI+G+S     VE++ LY  +        G+   +F+ P
Sbjct: 62  SVFSRIQHPNS-----FIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV---EFSIP 113

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL AC K  AF EG QVHG ++K     D FV N ++  Y + G+I   RRVFD M  R
Sbjct: 114 SVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNR 173

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEE-------------------GIKPNSVTMV 243
           +VVSW S+I    +    + A  LF EM E                    G++P+   +V
Sbjct: 174 DVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIV 233

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMK-ANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
            V+SA A L  +E G  + AY+    ++ ++  + +AL+DMY KCG ++ A  +F     
Sbjct: 234 SVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISH 293

Query: 303 -RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR- 360
            RN+   N+++S     GLAREAL I  EM      P+ +T L  +S  +  G +  G+ 
Sbjct: 294 RRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQF 353

Query: 361 ----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAG 415
               M   Y +   ++ +      MID++ + G+ E A  +  +M  +  +++W ++++ 
Sbjct: 354 YFESMHEKYKIVPRIQHY----GCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSA 409

Query: 416 LIKNGDVESAR 426
            +K+G +E  +
Sbjct: 410 SMKHGHIEIGK 420


>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/451 (47%), Positives = 303/451 (67%)

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++FD M  K++VS  +++    K+G++++AR +F  M  RD + WN M+ G TQ  M 
Sbjct: 112 AQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMP 171

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
            EA+ LFR ML  + K + VT++ V SACG LGAL+  +W+++YIE NGI  ++ + TAL
Sbjct: 172 NEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTAL 231

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VDM+++CG  + A  VF +++ +DV AW + I   AM G  ++A++LF  M R G+ P +
Sbjct: 232 VDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTN 291

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I F+G+L+AC H G V +GW +F  M D +G+ P+I HYGCMV+LLGRAG + +A +L+K
Sbjct: 292 ITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVK 351

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           +M +EP+ V+WG+LL AC+ H  + +     E + + +   SG ++LLSNIYA+ G W  
Sbjct: 352 NMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDG 411

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           VAR+R  MK+ G++K PG SSIEVN KVHEF +G  +HP+   I  ML E+N  L+  GY
Sbjct: 412 VARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGY 471

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
            P    VL D+ E EK+  L  HSEKLA+AFGLI+T     I++VKNLR+C DCH   KL
Sbjct: 472 TPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKL 531

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +SK+  R+I+VRD NRFH F  GSCSC D+W
Sbjct: 532 ISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 183/408 (44%), Gaps = 78/408 (19%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +   KT++ L Q H  + + GL H P    K+  + A +G    L Y+   F        
Sbjct: 37  IDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLG---RLDYSVALFG-----RT 88

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            + ++F + ++I G++  G  V A  L      F  +P+K                    
Sbjct: 89  QNPSVFFWTAIIHGHALRGDVVSAQQL------FDTMPEK-------------------- 122

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
               ++V +           ++  Y + G++   R +FD M ER+ V W  +I    +  
Sbjct: 123 ----SLVSL---------TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNG 169

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           +P EA+ LF  M++   KPN VT++ V+SAC +L  LE G  V +YI+  G++ N  +  
Sbjct: 170 MPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGT 229

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           ALVDMY KCG+++ A+ +F +  D+++V  N+++  Y   G ++EAL +   M   G  P
Sbjct: 230 ALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHP 289

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
             +T +  +SA        CG    G+V     EGWD I N M D Y    K E      
Sbjct: 290 TNITFIGILSA--------CGHS--GWV----TEGWD-IFNKMKDEYGIEPKIE------ 328

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLG 445
                     +  ++  L + G VE A E+   M    D + W T+LG
Sbjct: 329 ---------HYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 367



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+A + ++G+     L   L   +A  G    ++ +F R +   V  WTA I   A+ G+
Sbjct: 49  IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGD 108

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
              A +LF+ M  + +    +    +LT  +  G ++    LF  M +  GV      + 
Sbjct: 109 VVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEERDGVC-----WN 159

Query: 614 CMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAAC 651
            M+D   + G+  EAL L + M     +PN+V   S+L+AC
Sbjct: 160 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSAC 200


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/658 (37%), Positives = 370/658 (56%), Gaps = 37/658 (5%)

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + +F  M+ +GI P+S  +  VI  CA L  L+ G ++  +    G+  +++++++L+ M
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118

Query: 284 YMKC-------------------------------GAVDTAKQLFGECKDR----NLVLC 308
           Y++                                G V   K+LF + +D     NLV  
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N ++S + R G   +A+ +   M L G +PD  ++ S + A   L   L G   H YV++
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
            GL     + + +IDMY KC        +F+ M    V + N+L+ GL +NG V++A EV
Sbjct: 239 QGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEV 298

Query: 429 FSEMPGRDH--ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
           F +  G D   +SW +M+   +Q     EA+ELFR M  E +K + VT+  +  ACG + 
Sbjct: 299 FKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIA 358

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
           AL   K  + +  +NGI  D+ + +AL+DM+A+CG    +   F  M  R++ +W + + 
Sbjct: 359 ALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMA 418

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
             AM G   +A+ +F  M R G KPD + F  VL+AC+ GGL  +GW  F SM+  HGV 
Sbjct: 419 GYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVE 478

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
            ++ HY CMV LLGR+G L EA  +IK MP EP+  +WG+LL++C+ H  VD+   AA+R
Sbjct: 479 ARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKR 538

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
           + EL+P   G ++LLSNIYAS   W  V  VR  M+ +G++K PG S IE+  KVH   +
Sbjct: 539 VFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLA 598

Query: 727 GDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGL 786
           GD SHP+M  I   L ++   ++ +GYVP    VL DV+EQ+K+ +L  HSEKLA+  GL
Sbjct: 599 GDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGL 658

Query: 787 ISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++T    P++V+KNLR+C DCH+  K +S    REI VRD NRFH F+ G CSC D+W
Sbjct: 659 LNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 195/492 (39%), Gaps = 116/492 (23%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           T   L Q H HILK G+      + + +   +++  F    +  + F Y +         
Sbjct: 24  TKASLSQAHAHILKTGIS-----LPETIQIFSKLNHF---GHVIRVFSYMLTQ------- 68

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
                                        GI+PD    P V+  C   SA   G Q+H  
Sbjct: 69  -----------------------------GIVPDSRVLPTVIKTCAALSALQTGKQMHCF 99

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE- 222
            +  G   D  V + L++ Y +   + D R VFD++ +  VV+ ++LI   AR+   KE 
Sbjct: 100 ALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKET 159

Query: 223 ----------------------------------AVYLFFEMVEEGIKPNSVTMVCVISA 248
                                             AV +F  M  EG+KP+  ++  V+ A
Sbjct: 160 KELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPA 219

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
              L    +G ++  Y+ + G+  +  +V+AL+DMY KC        +F E  + ++  C
Sbjct: 220 VGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGAC 279

Query: 309 NTIMSNYVRLGLA---------------------------------REALAILDEMLLHG 335
           N +++   R GL                                   EAL +  EM + G
Sbjct: 280 NALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEG 339

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+ VT+   + A   +  LL G+  H + LRNG+     + + +IDMY KCG+   + 
Sbjct: 340 VKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASR 399

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM----PGRDHISWNTMLGGLTQEN 451
             FD M N+ +VSWNSL+AG   +G    A  +F  M       DH+S+  +L   TQ  
Sbjct: 400 LCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGG 459

Query: 452 MFEEAMELFRVM 463
           + EE    F  M
Sbjct: 460 LTEEGWFYFDSM 471


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/760 (33%), Positives = 403/760 (53%), Gaps = 94/760 (12%)

Query: 148 CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
           C ++    +  ++H  I+K   + + F+ N LIN Y + G+I   R VFD+M + N  SW
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 208 TSLICACARR-DLPK------------------------------EAVYLFFEMVEEGI- 235
            +++ A ++  DL                                EAV  +  M+++G+ 
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
             N +T   ++   +    ++LG ++   I + G  A   + ++LVDMY K G V  A Q
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAR-------------------------------EA 324
           +F E ++RN+V+ NT+++  +R G+ +                               EA
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           + +  +M   G   D+ T  S ++A   L  L  G+  H  ++R+G      + + ++DM
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KC     A  +F  M+NK VVSW +++ G  +NG  E A  VF +M            
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDM------------ 362

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
               Q N  E                D  T+  V S+C  L +L+     +     +G+ 
Sbjct: 363 ----QRNGIEP---------------DDFTLGSVISSCANLASLEEGAQFHCQALVSGLI 403

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
             + ++ AL+ ++ +CG  + + Q+F  M  RD  +WTA +   A  G   + ++LF  M
Sbjct: 404 SFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERM 463

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
           L QG+KPD++ F+ VL+ACS  GLV +G   F SM   HG+ P   HY CM+DL GRAG 
Sbjct: 464 LVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGR 523

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA + I  MP  P+ + W +LL++C+ + N +I  +AAE + ELDP+    ++LLS+I
Sbjct: 524 LEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSI 583

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YA+ GKW+NVA++R  M+E+G RK PG S I+   KV+ F++ D+S P  + I + L ++
Sbjct: 584 YAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKL 643

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
           N ++ + GYVPD ++VL DV++ EK  +L+HHSEKLA+AFGL+     +PIRVVKNLR+C
Sbjct: 644 NHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVC 703

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH+  K +SK+  REI+VRD  RFH F+ G+CSC DFW
Sbjct: 704 GDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 156/576 (27%), Positives = 255/576 (44%), Gaps = 96/576 (16%)

Query: 42  CKTLNEL--KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           C+T N+   K+ HC I+K     +    + ++   +++G   ++TYA+  FD   + N  
Sbjct: 16  CETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLG---NITYARHVFDKMPQPNSF 72

Query: 100 SATLFM--------------------------YNSLIRGYSCIGLGVEAISLYVELAGFG 133
           S    +                          +NSLI GY C G  VEA+  Y  +   G
Sbjct: 73  SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132

Query: 134 ILP-DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           +L  ++ TF  +L   +       G Q+HG IVK GF   VFV + L++ Y + G +   
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192

Query: 193 RRVFDEMSERNVV-------------------------------SWTSLICACARRDLPK 221
            +VFDE+ ERNVV                               SWT++I    +  L  
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ LF +M +EG+  +  T   V++AC  L+ L+ G  +   I   G   N  + +ALV
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY KC +V  A+ +F    ++N+V    ++  Y + G + EA+ +  +M  +G  PD  
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+ S +S+ A L  L  G   H   L +GL  + ++ N +I +Y KCG  E + ++FD M
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
           S +  VSW +L++G  + G                                  E ++LF 
Sbjct: 433 SFRDEVSWTALVSGYAQFGKA-------------------------------NETIDLFE 461

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARC 520
            ML + +K D VT + V SAC   G ++   ++  + ++ +GI       T ++D+F R 
Sbjct: 462 RMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRA 521

Query: 521 GDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           G  + A     +M    D   W   + +  + GN E
Sbjct: 522 GRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEE 557


>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g15340, mitochondrial; Flags: Precursor
 gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
 gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/614 (39%), Positives = 363/614 (59%), Gaps = 16/614 (2%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMK--ANALMVNALVDMYMKCGAVDTAKQLFGEC-- 300
           ++  CA    L  G  + A +   G+K    + + NAL   Y   G + TA++LF E   
Sbjct: 12  LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            +++ V   T++S++ R GL   ++ +  EM       D V+++      A+L DL   +
Sbjct: 72  SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             HG  ++ G+     +CN ++DMY KCG      RIF+ +  K+VVSW  ++  ++K  
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVA 479
            +E  REVF EMP R+ ++W  M+ G        E +EL   M+      ++ VT+  + 
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251

Query: 480 SACGYLGALDLAKWIYAYIEKNGI-------HCDMQLATALVDMFARCGDPQRAMQVFRR 532
           SAC   G L + +W++ Y  K  +       + D+ + TALVDM+A+CG+   +M VFR 
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M KR+V  W A    +AM G G   +++F +M+R+ +KPD + F  VL+ACSH G+V++G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
           W  F S+   +G+ P++ HY CMVDLLGRAGL+ EA  L++ MPV PN+V+ GSLL +C 
Sbjct: 371 WRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H  V+IA      + ++ P  +   +L+SN+Y + G+      +R  ++++GIRK+PG 
Sbjct: 430 VHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL--LDVDEQEKK 770
           SSI VN  VH F+SGD SHP    I   L E+  R+R AGYVPD++ ++   + D +EK+
Sbjct: 490 SSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKE 549

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
             L  HSEKLA+ FGL+ T  + P+ V KNLR+C DCHS  K+VSKVYDREII+RD NRF
Sbjct: 550 QALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRF 609

Query: 831 HFFRQGSCSCSDFW 844
           H F+ GSCSCSD+W
Sbjct: 610 HQFKGGSCSCSDYW 623



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 211/468 (45%), Gaps = 76/468 (16%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDR--DVFVENCLINFYGECGDIVDGRRVFDE-- 198
            +L  C   S    G ++H  +   G  +    ++ N L  FY   G++V  +++FDE  
Sbjct: 11  LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           +SE++ V WT+L+ + +R  L   ++ LF EM  + ++ + V++VC+   CAKL++L   
Sbjct: 71  LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK----------------- 301
            +      ++G+  +  + NAL+DMY KCG V   K++F E +                 
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190

Query: 302 --------------DRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSA 346
                         +RN V    +++ Y+  G  RE L +L EM+   G   + VT+ S 
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGL-----EGWDSIC--NTMIDMYMKCGKQEMACRIFD 399
           +SA AQ G+L+ GR  H Y L+  +       +D +     ++DMY KCG  + +  +F 
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M  + VV+WN+L +GL  +G             GR                     +++
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGK------------GR-------------------MVIDM 339

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M+ E +K D +T   V SAC + G +D     +  +   G+   +     +VD+  R
Sbjct: 340 FPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGR 398

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
            G  + A  + R M    +     + +G+ ++ G  E A  +  E+++
Sbjct: 399 AGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ 446



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 191/436 (43%), Gaps = 61/436 (13%)

Query: 49  KQPHCHILKQGLGHKP-SYISKVVCTCAQMGTFESLTYAQKAFDYYI---KDNETSATLF 104
           K+ H  +   GL   P SY+S  +       +   +  AQK FD      KDN       
Sbjct: 26  KELHAVLTTSGLKKAPRSYLSNALFQF--YASSGEMVTAQKLFDEIPLSEKDNVD----- 78

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            + +L+  +S  GL V ++ L+VE+    +  D  +   +   C K    G   Q HG  
Sbjct: 79  -WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVA 137

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-------- 216
           VKMG    V V N L++ YG+CG + + +R+F+E+ E++VVSWT ++    +        
Sbjct: 138 VKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGR 197

Query: 217 ---RDLP--------------------KEAVYLFFEMVEE-GIKPNSVTMVCVISACAKL 252
               ++P                    +E + L  EMV   G   N VT+  ++SACA+ 
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257

Query: 253 QNLELGDRVCAY-------IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
            NL +G  V  Y       + E     + ++  ALVDMY KCG +D++  +F   + RN+
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNV 317

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  N + S     G  R  + +  +M +   +PD +T  + +SA +  G +  G  C   
Sbjct: 318 VTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM---SNKTVVSWNSLIAGLIKNGDV 422
           +   GLE        M+D+  + G  E A  +   M    N+ V+   SL+     +G V
Sbjct: 377 LRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVL--GSLLGSCSVHGKV 434

Query: 423 ESA----REVFSEMPG 434
           E A    RE+    PG
Sbjct: 435 EIAERIKRELIQMSPG 450


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/689 (35%), Positives = 389/689 (56%), Gaps = 67/689 (9%)

Query: 160 VHGAIVKMGFDRDVFVENCLINF---YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           +H  ++K G     +  + LI F         +     VF+ + E N++ W ++    A 
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
              P  A+ L+  M+  G+ PNS T   ++ +CAK +  + G ++  ++ +LG   +  +
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVL----------------------------- 307
             +L+ MY++ G ++ A ++F E   R++V                              
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188

Query: 308 --CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
              N ++S Y   G  +EAL +  +M+    RPD  TM++ VSA AQ G +  GR  H +
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSW 248

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +  +G      I N +ID+Y KCG                               ++E+A
Sbjct: 249 IDDHGFGSNLKIVNALIDLYSKCG-------------------------------ELETA 277

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
             +F  +P +D ISWNT++GG T  N+++EA+ LF+ ML      + VTM+ +  AC +L
Sbjct: 278 CGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 337

Query: 486 GALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           GA+D+ +WI+ YI+K   G+     L T+L+DM+A+CGD + A QVF  +  + +S+W A
Sbjct: 338 GAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 397

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I   AM G  + + ++F+ M + GI+PD I FVG+L+ACSH G+++ G H+FRSMT  +
Sbjct: 398 MIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDY 457

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
            ++P++ HYGCM+DLLG +GL  EA ++I +M +EP+ VIW SLL AC+ H NV++    
Sbjct: 458 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESF 517

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
           A+ + +++PE  G +VLLSNIYA+AG+W  VA  R  + ++G++K+PG SSIE++  VHE
Sbjct: 518 AQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHE 577

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F  GD+ HP    I  ML EM   L +AG+VPD + VL +++E+ K+  L HHSEKLA+A
Sbjct: 578 FIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 637

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           FGLIST     + +VKNLR+C +CH   K
Sbjct: 638 FGLISTKPGTKLTIVKNLRVCRNCHEAYK 666



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 176/566 (31%), Positives = 296/566 (52%), Gaps = 73/566 (12%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           + L  L+  H  ++K GL +    +SK++  C     F+ L YA   F+   + N     
Sbjct: 1   QILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPN----- 55

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L ++N++ RG++     V A+ LYV +   G+LP+ +TFPF+L +C KS AF EG Q+HG
Sbjct: 56  LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHG 115

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR----- 217
            ++K+G D D++V   LI+ Y + G + D  +VFDE   R+VVS+T+LI   A R     
Sbjct: 116 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIEN 175

Query: 218 ------DLP--------------------KEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
                 ++P                    KEA+ LF +M++  ++P+  TMV V+SACA+
Sbjct: 176 AQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 235

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
             ++ELG +V ++ID+ G  +N  +VNAL+D+Y KCG ++TA  LF     ++++  NT+
Sbjct: 236 SGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTL 295

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR--N 369
           +  Y  + L +EAL +  EML  G  P+ VTMLS + A A LG +  GR  H Y+ +   
Sbjct: 296 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 355

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G+    S+  ++IDMY KCG  E A ++F+ + +K++ SWN++I G   +G  +++ ++F
Sbjct: 356 GVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIF 415

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
           S M                                   I+ D +T VG+ SAC + G LD
Sbjct: 416 SRMR-------------------------------KNGIEPDDITFVGLLSACSHSGMLD 444

Query: 490 LAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
           L + I+  + ++  +   ++    ++D+    G  + A ++   ME + D   W + + A
Sbjct: 445 LGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA 504

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDS 573
             M GN E        +++  I+P++
Sbjct: 505 CKMHGNVELGESFAQNLIK--IEPEN 528


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/775 (33%), Positives = 406/775 (52%), Gaps = 80/775 (10%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVEL---AGFGILP-DKFTFPFVLNACTKSSAFGEGVQVH 161
           + ++I GY   GL   +I  ++ +   +   I   D F++   + AC   ++    +Q+H
Sbjct: 106 WTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLH 165

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIV------------------------------- 190
             ++K+       ++N L++ Y +CG I                                
Sbjct: 166 AHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPY 225

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           +   VF  M ER+ VSW +LI   ++       +  F EM   G KPN +T   V+SACA
Sbjct: 226 EALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACA 285

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            + +L+ G  + A I  +    +A + + L+DMY KCG +  A+++F    ++N V    
Sbjct: 286 SISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTC 345

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++S   + GL  +ALA+ ++M       D  T+ + +   +       G + HGY +++G
Sbjct: 346 LISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSG 405

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           ++ +  + N +I MY +CG  E A   F  M  +  +SW ++I    +NGD++ AR+ F 
Sbjct: 406 MDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFD 465

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
            MP R+ I+WN+ML    Q    EE M+L+ +M S+ +K D VT      AC  L  + L
Sbjct: 466 MMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKL 525

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
              + +++ K G+  D+ +A ++V M++RCG  + A +VF  +  +++ +W A + A A 
Sbjct: 526 GTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQ 585

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G G +A+E + +MLR   KPD I +V VL+                             
Sbjct: 586 NGLGNKAIETYEDMLRTECKPDHISYVAVLS----------------------------- 616

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
                 DLLGRAGLL +A +LI  MP +PN  +WG+LL AC+ H +  +A  AA+++ EL
Sbjct: 617 ------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAKKLMEL 670

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           + E SG +VLL+NIYA +G+  NVA +R  MK +GIRK PG S IEV+ +VH FT  + S
Sbjct: 671 NVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETS 730

Query: 731 HPEMNNISSMLREMNCRLRDAG-YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           HP++N +   L EM  ++ D G YV      ++    + +KY    HSEKLA AFGL+S 
Sbjct: 731 HPQINEVYVKLEEMMKKIEDTGRYVS-----IVSCAHRSQKY----HSEKLAFAFGLLSL 781

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              MPI+V KNLR+C DCH   KL+S V  RE+I+RD  RFH F+ G CSC D+W
Sbjct: 782 PPWMPIQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 219/479 (45%), Gaps = 77/479 (16%)

Query: 38  SLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           ++K C  L   +   Q H H++K  LG +    + +V    + G   ++T A+  F    
Sbjct: 148 TMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCG---AITLAETVFL--- 201

Query: 95  KDNETSATLFMYNSLIRGYSCI-------------------------------GLGVEAI 123
             N  S +LF +NS+I GYS +                               G G+  +
Sbjct: 202 --NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCL 259

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
           S +VE+   G  P+  T+  VL+AC   S    G  +H  I++M    D F+ + LI+ Y
Sbjct: 260 STFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMY 319

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            +CG +   RRVF+ + E+N VSWT LI   A+  L  +A+ LF +M +  +  +  T+ 
Sbjct: 320 AKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLA 379

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC---------------- 287
            ++  C+       G+ +  Y  + GM +   + NA++ MY +C                
Sbjct: 380 TILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLR 439

Query: 288 ---------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
                          G +D A+Q F    +RN++  N+++S Y++ G + E + +   M 
Sbjct: 440 DTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMR 499

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               +PD VT  +++ A A L  +  G     +V + GL    S+ N+++ MY +CG+ +
Sbjct: 500 SKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIK 559

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGL 447
            A ++FD +  K ++SWN+++A   +NG    A E + +M       DHIS+  +L  L
Sbjct: 560 EARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDL 618



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 200/446 (44%), Gaps = 47/446 (10%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G+ A+  ++N L+ MY  CG VD A ++F E    N+   NT++  +   G  REA  + 
Sbjct: 34  GLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSGRMREAENLF 93

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLG------------------DL-------------L 357
           DEM  H  R D V+  + +S   Q G                  D+              
Sbjct: 94  DEMP-HIVR-DSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTCTMKA 151

Query: 358 CGRMC--------HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           CG +         H +V++  L     I N+++DMY+KCG   +A  +F ++ + ++  W
Sbjct: 152 CGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCW 211

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           NS+I G  +      A  VF+ MP RDH+SWNT++   +Q       +  F  M +   K
Sbjct: 212 NSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFK 271

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            + +T   V SAC  +  L     ++A I +     D  L + L+DM+A+CG    A +V
Sbjct: 272 PNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRV 331

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + +++  +WT  I  +A  G  + A+ LFN+M +  +  D      +L  CS     
Sbjct: 332 FNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYA 391

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
             G  L        G+   +     ++ +  R G   +A    +SMP+  + + W +++ 
Sbjct: 392 ATG-ELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLR-DTISWTAMIT 449

Query: 650 ACQKHQNVDIAAYAAERITELDPEKS 675
           A  ++ ++D     A +  ++ PE++
Sbjct: 450 AFSQNGDID----RARQCFDMMPERN 471



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 145/336 (43%), Gaps = 44/336 (13%)

Query: 357 LCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
           LCG     R  H  ++ +GL+    + N ++ MY  CG  + A R+F   ++  + +WN+
Sbjct: 16  LCGSPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNT 75

Query: 412 LIAGLIKNGDVESAREVFSEMPG--RDHISWNTMLGGLTQENMFEEAMELFRVMLSER-- 467
           ++     +G +  A  +F EMP   RD +SW TM+ G  Q  +   +++ F  ML +   
Sbjct: 76  MLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNH 135

Query: 468 --IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG---- 521
                D  +      ACG L +   A  ++A++ K  +     +  +LVDM+ +CG    
Sbjct: 136 DIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITL 195

Query: 522 ---------------------------DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
                                       P  A+ VF RM +RD  +W   I   +  G+G
Sbjct: 196 AETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHG 255

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
            + +  F EM   G KP+ + +  VL+AC+    +  G HL   +  +       +  G 
Sbjct: 256 IRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSG- 314

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           ++D+  + G L  A  +  S+  E N V W  L++ 
Sbjct: 315 LIDMYAKCGCLALARRVFNSLG-EQNQVSWTCLISG 349


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 272/814 (33%), Positives = 423/814 (51%), Gaps = 52/814 (6%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYI-SKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           ++ C ++   K  H  I       +  Y+ S +V    + G+ ES      A D + K  
Sbjct: 36  VRECNSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLES------AIDVFHKIA 89

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
             S  + ++  LI  Y   G    AI+L+  +   GI  D   F  VL+AC+       G
Sbjct: 90  HKS--IVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAG 147

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICACAR 216
             +H   V+ G      V + L++ YG CG + D   +F  +    +VV W ++I A ++
Sbjct: 148 RLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQ 207

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL----GDRVCAYIDELGMKA 272
              P+EA+ +F+ M++ GI P+ VT V V  AC+   +L      G   C  +DE G+ +
Sbjct: 208 NGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHAC--LDETGLGS 265

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           + ++  ALV+ Y +CG +D A++ F E  +RN V   ++++ + ++G    A+     ML
Sbjct: 266 DVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AVETFHAML 324

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           L G  P R T+ +A+       DL   R+        G+    +I   ++  Y +C  QE
Sbjct: 325 LEGVVPTRSTLFAALEGCE---DLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQE 381

Query: 393 MACRIFDHMSNKTVVSWN-SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
            A R+F   S +    W+ +L+  +I          V+++   RD  S   + G   +  
Sbjct: 382 DAIRVF---SAREEGEWDAALVTAMIA---------VYAQC--RDRRSTFKLWGAAIERG 427

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLA 510
                           I  DR+  +    AC  L AL   + I+A +  +  +  D+ L 
Sbjct: 428 ----------------ISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLG 471

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            A+V M+ +CG  + A   F  M  RD  +W A + A A  G  E   +LF  ML++G  
Sbjct: 472 NAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFD 531

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
            + I F+ +L+AC+H GLV  G   F +MT  HGV P   HYGCMVDLLGR G L +A  
Sbjct: 532 AERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHG 591

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           ++++MPV P+   W +L+ AC+ + + +   +AAER+ EL  + +  +V L NIY++AG+
Sbjct: 592 IVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGR 651

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W + A VR  M + G+RK+PG SSIE+  KVHEF   D SHP+   I + L  +   +  
Sbjct: 652 WDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIER 711

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           AGY      VL DV+E++K+ LL  HSEKLA+AFG++ST +   +RV+KNLR+C DCH+ 
Sbjct: 712 AGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNA 771

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +K +SKV+ REI+VRD  RFH F+ G+CSC D+W
Sbjct: 772 SKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/715 (35%), Positives = 382/715 (53%), Gaps = 39/715 (5%)

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
           F  +PD      +LN   K  +     Q+H  +V       +   N L+  Y +CG I  
Sbjct: 94  FSSVPD---LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHH 150

Query: 192 GRRVFDEMSE--RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
              +F+       NVV+WT+LI   +R + P +A+  F  M   GI PN  T   ++ AC
Sbjct: 151 TLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPAC 210

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           A    L  G ++ A I +     +  +  AL+DMY KCG++  A+ +F E   RNLV  N
Sbjct: 211 AHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWN 270

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           +++  +V+  L   A+ +  E+L  GP  D+V++ S +SA A L +L  G+  HG +++ 
Sbjct: 271 SMIVGFVKNKLYGRAIGVFREVLSLGP--DQVSISSVLSACAGLVELDFGKQVHGSIVKR 328

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL G   + N+++DMY KCG  E A ++F                     GD        
Sbjct: 329 GLVGLVYVKNSLVDMYCKCGLFEDATKLF------------------CGGGD-------- 362

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                RD ++WN M+ G  +   FE+A   F+ M+ E ++ D  +   +  A   + AL 
Sbjct: 363 -----RDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALT 417

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
               I++++ K G   + +++++LV M+ +CG    A QVFR  ++ +V  WTA I    
Sbjct: 418 QGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFH 477

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
             G   +A++LF EML +G+ P+ I FV VL+ACSH G ++ G+  F SM ++H + P +
Sbjct: 478 QHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGL 537

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HY CMVDLLGR G L EA   I+SMP EP+ ++WG+LL AC KH NV++    AER+ +
Sbjct: 538 EHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFK 597

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           L+P+  G ++LLSNIY   G       VR  M   G+RK  G S I+V  +   F + D 
Sbjct: 598 LEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDR 657

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SH     I  ML+++   ++  GYV +       V+  E++ L   HSEKLA+AFGL+  
Sbjct: 658 SHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEEQSLWC-HSEKLALAFGLLVL 716

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
               P+R+ KNLR C DCH+  K  S+++ REIIVRD NRFH F  GSCSC D+W
Sbjct: 717 PPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 251/566 (44%), Gaps = 43/566 (7%)

Query: 10  LVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISK 69
           L L T   + +   H+  + P     + +    K+L    Q H  ++        + I+ 
Sbjct: 78  LQLFTSYQSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINT 137

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++   A+ G   S+ +    F+ Y      S  +  + +LI   S      +A++ +  +
Sbjct: 138 LLLLYAKCG---SIHHTLLLFNTY---PHPSTNVVTWTTLINQLSRSNKPFQALTFFNRM 191

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              GI P+ FTF  +L AC  ++   EG Q+H  I K  F  D FV   L++ Y +CG +
Sbjct: 192 RTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSM 251

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
           +    VFDEM  RN+VSW S+I    +  L   A+ +F E++  G  P+ V++  V+SAC
Sbjct: 252 LLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSAC 309

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           A L  L+ G +V   I + G+     + N+LVDMY KCG  + A +LF    DR++V  N
Sbjct: 310 AGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWN 369

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++    R     +A      M+  G  PD  +  S   ASA +  L  G M H +VL+ 
Sbjct: 370 VMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKT 429

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G      I ++++ MY KCG    A ++F       VV W ++I              VF
Sbjct: 430 GHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMIT-------------VF 476

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                              Q     EA++LF  ML+E +  + +T V V SAC + G +D
Sbjct: 477 H------------------QHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKID 518

Query: 490 LA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              K+  +    + I   ++    +VD+  R G  + A +    M  + D   W A +GA
Sbjct: 519 DGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGA 578

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDS 573
                N E   E+   + +  ++PD+
Sbjct: 579 CGKHANVEMGREVAERLFK--LEPDN 602



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 214/432 (49%), Gaps = 31/432 (7%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L+E +Q H  I K    + P   + ++   A+ G   S+  A+  FD     N     L 
Sbjct: 216 LSEGQQIHALIHKHCFLNDPFVATALLDMYAKCG---SMLLAENVFDEMPHRN-----LV 267

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +NS+I G+    L   AI ++ E+   G  PD+ +   VL+AC        G QVHG+I
Sbjct: 268 SWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSI 325

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           VK G    V+V+N L++ Y +CG   D  ++F    +R+VV+W  +I  C R    ++A 
Sbjct: 326 VKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQAC 385

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             F  M+ EG++P+  +   +  A A +  L  G  + +++ + G   N+ + ++LV MY
Sbjct: 386 TYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMY 445

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KCG++  A Q+F E K+ N+V    +++ + + G A EA+ + +EML  G  P+ +T +
Sbjct: 446 GKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFV 505

Query: 345 SAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           S +SA +  G +  G      M + + ++ GLE +      M+D+  + G+ E ACR  +
Sbjct: 506 SVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYA----CMVDLLGRVGRLEEACRFIE 561

Query: 400 HMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM-------PGRDHISWNTMLGGLTQEN 451
            M      + W +L+    K+ +VE  REV   +       PG   +  N  +    +  
Sbjct: 562 SMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYI----RHG 617

Query: 452 MFEEAMELFRVM 463
           M EEA E+ R+M
Sbjct: 618 MLEEADEVRRLM 629


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/558 (40%), Positives = 341/558 (61%), Gaps = 31/558 (5%)

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           C  +  A Q+F + ++ N+   NT++  Y        AL +  +M +    PD  T    
Sbjct: 87  CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           + A A+L D+  G   H   +RNG E    + NT++ MY  CG                 
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACG----------------- 189

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                           ESA ++F  M  R+ ++WN+++ G        EA+ LFR M   
Sbjct: 190 --------------HAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR 235

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            ++ D  TMV + SAC  LGAL L +  + Y+ K G+  ++    AL+D++A+CG  ++A
Sbjct: 236 GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQA 295

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            +VF  ME++ V +WT+ I  +A+ G G++A+ELF E+ R+G+ P  I FVGVL ACSH 
Sbjct: 296 HKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHC 355

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           G+V++G+  F+ M + +G+ P+I HYGCMVDLLGRAGL+ +A + I++MP++PN V+W +
Sbjct: 356 GMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRT 415

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC  H ++ +   A  ++ +L+P+ SG +VLLSN+YAS  +W++V +VR  M  +G+
Sbjct: 416 LLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGV 475

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
           +K PG S +E+  ++HEF  GD SHP+   I   L E+   L+  GYVP ++NVL D++E
Sbjct: 476 KKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEE 535

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EK+  LS+HSEK+A+AF LI+T+  +PIRVVKNLR+C DCH   KL+SKV+DREI+VRD
Sbjct: 536 EEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRD 595

Query: 827 NNRFHFFRQGSCSCSDFW 844
            +RFH F+ G CSC D+W
Sbjct: 596 RSRFHHFKDGHCSCKDYW 613



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 220/470 (46%), Gaps = 45/470 (9%)

Query: 26  AKTTPKDSPSIGSLKNCKTL--------NELKQPHCHILKQGLGHKPSYISKVVCTCAQM 77
           + +T  +SP    LK C  L         + +Q H   ++ G          V  T   M
Sbjct: 26  STSTCPESPKSYILKKCIALLLSCASSKFKFRQIHAFSIRHG----------VPLTNPDM 75

Query: 78  GTF---------ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVE 128
           G +           ++YA + F      N     +F +N++IRGY+     + A+ LY +
Sbjct: 76  GKYLIFTLLSFCSPMSYAHQIFSQIQNPN-----IFTWNTMIRGYAESENPMPALELYRQ 130

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           +    I PD  T+PF+L A  K     EG +VH   ++ GF+  VFV+N L++ Y  CG 
Sbjct: 131 MHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGH 190

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
                ++F+ M+ERN+V+W S+I   A    P EA+ LF EM   G++P+  TMV ++SA
Sbjct: 191 AESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSA 250

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA+L  L LG R   Y+ ++G+  N    NAL+D+Y KCG++  A ++F E +++++V  
Sbjct: 251 CAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSW 310

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCH 363
            +++      G  +EAL +  E+   G  P  +T +  + A +  G +  G     RM  
Sbjct: 311 TSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKE 370

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDV 422
            Y +   +E +      M+D+  + G  + A     +M      V W +L+     +G +
Sbjct: 371 EYGIVPKIEHY----GCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHL 426

Query: 423 ---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
              E AR    ++  +    +  +      E  + +  ++ R ML E +K
Sbjct: 427 ALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVK 476



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 195/402 (48%), Gaps = 41/402 (10%)

Query: 159 QVHGAIVKMGF-----DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
           Q+H   ++ G      D   ++   L++F   C  +    ++F ++   N+ +W ++I  
Sbjct: 58  QIHAFSIRHGVPLTNPDMGKYLIFTLLSF---CSPMSYAHQIFSQIQNPNIFTWNTMIRG 114

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A  + P  A+ L+ +M    I+P++ T   ++ A AKL ++  G++V +     G ++ 
Sbjct: 115 YAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESL 174

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             + N LV MY  CG  ++A +LF    +RNLV  N++++ Y   G   EAL +  EM L
Sbjct: 175 VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGL 234

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  PD  TM+S +SA A+LG L  GR  H Y+++ GL+G     N ++D+Y KCG    
Sbjct: 235 RGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQ 294

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++FD M  K+VVSW SLI GL  NG                                 
Sbjct: 295 AHKVFDEMEEKSVVSWTSLIVGLAVNG-------------------------------FG 323

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATA 512
           +EA+ELF+ +  + +    +T VGV  AC + G +D    +     E+ GI   ++    
Sbjct: 324 KEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGC 383

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
           +VD+  R G  ++A +  + M  + +   W   +GA  + G+
Sbjct: 384 MVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH 425


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 270/811 (33%), Positives = 439/811 (54%), Gaps = 60/811 (7%)

Query: 48   LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYN 107
            L+Q    + K G  H     S +V   A+ G   S+ YA+  F      N  S      N
Sbjct: 303  LEQLLTRVEKSGFLHDLYVGSALVSGFAKAG---SIGYAKNIFQKMSYRNVVS-----LN 354

Query: 108  SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK----SSAFGEGVQVHGA 163
             LI G      G EA+ L++E+    +  +  ++  +L A  +     +   +G +VH  
Sbjct: 355  GLIIGLVRQKRGEEAVELFMEMKD-SVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAF 413

Query: 164  IVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ G  +  + + N LIN Y +CG I D   VF  M  ++ V+W S+I    +     E
Sbjct: 414  LIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLE 473

Query: 223  AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            AV  F EM    + P++ TM+  +S+CA L  + +G+++     +LG+  +  + NAL+ 
Sbjct: 474  AVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLA 533

Query: 283  MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE------MLLHGP 336
            +Y +CG V   ++ F    D + V  N+++       LA    ++L+       M+  G 
Sbjct: 534  LYGECGYVKECQKAFSLMLDYDHVSWNSLIG-----ALADSEPSMLEAVESFLVMMRAGW 588

Query: 337  RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
             P+RVT ++ ++A + L     G+  H  VL+  +    +I N ++  Y KCG       
Sbjct: 589  DPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCG------- 641

Query: 397  IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQENMFEE 455
                                    D+     +FS M  R D +SWN+M+ G     +  +
Sbjct: 642  ------------------------DMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPK 677

Query: 456  AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
            AM++   M+ +  ++D  T   V SAC  +  L+    ++    +  +  D+ + +ALVD
Sbjct: 678  AMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVD 737

Query: 516  MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
            M+A+CG    A + F  M  R++ +W + I   A  G+G ++++LF +M  QG  PD + 
Sbjct: 738  MYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVT 797

Query: 576  FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
            FVGVL+ACSH GLVN+G+  F SM++I+G++P++ H+ CMVDLLGR G L +  D +  M
Sbjct: 798  FVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQM 857

Query: 636  PVEPNDVIWGSLLAAC--QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
            PV+PN +IW ++L AC     +N  +   AAE + E++P  +  ++LLSN+YAS GKW +
Sbjct: 858  PVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDD 917

Query: 694  VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
            VA+ R+ M++  ++K  G S + +   VH F +GD+SHPE + I   L+E+N ++R AGY
Sbjct: 918  VAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGY 977

Query: 754  VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
            +P+    L D++ + K+ LLS+HSEK+A+AF L   SK MPIR++KNLR+C DCHS  K 
Sbjct: 978  IPETRFALYDLEGESKEELLSYHSEKIAVAFVLTRPSK-MPIRILKNLRVCGDCHSAFKY 1036

Query: 814  VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S++ +R+I++RD+NRFH F  G CSC DFW
Sbjct: 1037 ISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/616 (25%), Positives = 278/616 (45%), Gaps = 54/616 (8%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           ++ H  + K G  +     + ++   A++G   S    +K FD     N     L  ++ 
Sbjct: 93  EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGS---GRKVFDEMPLRN-----LVSWSC 144

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG--EGVQVHGAIVK 166
           LI GY+   +  EA  L+ ++   G +P+ + F  V+ AC +   +G   G+Q+HG + K
Sbjct: 145 LISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSK 204

Query: 167 MGFDRDVFVENCLINFYGECGDIVD-GRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             +  DV   N LI+ YG    +VD  RR FD +  RN+VS  S+I    +R     A  
Sbjct: 205 TQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFD 264

Query: 226 LFFEMVEE----GIKPNSVTMVCVISACAKLQN--LELGDRVCAYIDELGMKANALMVNA 279
           +F  M +E    G+KPN  T   +ISA   L N  L L +++   +++ G   +  + +A
Sbjct: 265 IFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSA 324

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM---LLHGP 336
           LV  + K G++  AK +F +   RN+V  N ++   VR     EA+ +  EM   +   P
Sbjct: 325 LVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNP 384

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL-EGWDSICNTMIDMYMKCGKQEMAC 395
               + + +             G   H +++R+GL     +I N +I+MY KCG    AC
Sbjct: 385 NSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDAC 444

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            +F  M N                               +D ++WN+M+ GL Q   F E
Sbjct: 445 VVFRLMDN-------------------------------KDSVTWNSMITGLDQNKQFLE 473

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A++ F+ M    +     TM+   S+C  LG + + + ++    K G+  D+ ++ AL+ 
Sbjct: 474 AVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLA 533

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA-MEGNGEQAVELFNEMLRQGIKPDSI 574
           ++  CG  +   + F  M   D  +W + IGA+A  E +  +AVE F  M+R G  P+ +
Sbjct: 534 LYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRV 593

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ +L A S   L   G  +  ++     V+        ++   G+ G +G   ++   
Sbjct: 594 TFITILAAVSSLSLHELGKQI-HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSR 652

Query: 635 MPVEPNDVIWGSLLAA 650
           M    ++V W S+++ 
Sbjct: 653 MSDRQDEVSWNSMISG 668



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 206/442 (46%), Gaps = 44/442 (9%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVC 72
            V T     + +  P +   I +L +C +L  +   +Q HC  LK GL    S  + ++ 
Sbjct: 474 AVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLA 533

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLG-VEAISLYVELAG 131
              + G  +     QKAF   +  +  S     +NSLI   +      +EA+  ++ +  
Sbjct: 534 LYGECGYVKE---CQKAFSLMLDYDHVS-----WNSLIGALADSEPSMLEAVESFLVMMR 585

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G  P++ TF  +L A +  S    G Q+H  ++K     D  +EN L+  YG+CGD+  
Sbjct: 586 AGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGY 645

Query: 192 GRRVFDEMSER-NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
              +F  MS+R + VSW S+I      +L  +A+ + + M+++G + +  T   V+SACA
Sbjct: 646 CENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACA 705

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            +  LE G  V        ++++ ++ +ALVDMY KCG +D A + F     RNL   N+
Sbjct: 706 TVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNS 765

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++S Y R G   ++L +  +M L GP PD VT +  +SA +  G           ++  G
Sbjct: 766 MISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAG-----------LVNEG 814

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
              +DS    M ++Y    + E       H S         ++  L + G++    +  +
Sbjct: 815 FSHFDS----MSEIYGLAPRME-------HFS--------CMVDLLGRVGELNKMEDFLN 855

Query: 431 EMPGRDHI-SWNTMLGGLTQEN 451
           +MP + ++  W T+LG   + N
Sbjct: 856 QMPVKPNVLIWRTVLGACCRAN 877


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 266/815 (32%), Positives = 429/815 (52%), Gaps = 44/815 (5%)

Query: 34  PSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           PS+  LK C  L E +   + H   +K G G    ++       A  G    L  A+  F
Sbjct: 149 PSV--LKACGALGESRLGAEIHGVAVKCGFG---EFVFVCNALIAMYGKCGDLGGARVLF 203

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           D  + + E + +   +NS+I  +   G  +EA+SL+  +   G+  + +TF   L     
Sbjct: 204 DGIMMEKEDTVS---WNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVED 260

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
            S    G+ +HGA +K     DV+V N LI  Y +CG + D  RVF  M  R+ VSW +L
Sbjct: 261 PSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTL 320

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           +    + +L ++A+  F +M     KP+ V+++ +I+A  +  NL  G  V AY    G+
Sbjct: 321 LSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGL 380

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
            +N  + N L+DMY KC  V      F    +++L+   TI++ Y +     EA+ +  +
Sbjct: 381 DSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRK 440

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           + + G   D + + S + A + L      R  HGYV +  L     + N ++++Y + G 
Sbjct: 441 VQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADI-MLQNAIVNVYGEVGH 499

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
           ++ A R F+ + +K                               D +SW +M+      
Sbjct: 500 RDYARRAFESIRSK-------------------------------DIVSWTSMITCCVHN 528

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
            +  EA+ELF  +    I+ D + ++   SA   L +L   K I+ ++ + G   +  +A
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           ++LVDM+A CG  + + ++F  +++RD+  WT+ I A  M G G +A+ LF +M  + + 
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVI 648

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD I F+ +L ACSH GL+ +G   F  M   + + P   HY CMVDLL R+  L EA  
Sbjct: 649 PDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQ 708

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            ++SMP++P+  +W +LL AC  H N ++   AA+ + + D + SG + L+SNI+A+ G+
Sbjct: 709 FVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGR 768

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL-R 749
           W +V  VRL+MK  G++K PG S IEV+ K+H F + D+SHP+ ++I   L +    L +
Sbjct: 769 WNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGK 828

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
             GY+     V  +V E+EK  +L  HSE+LA+ +GL+ T K   IR+ KNLR+C DCH+
Sbjct: 829 KGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHT 888

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           F K+ S+V  R ++VRD NRFH F +G CSC DFW
Sbjct: 889 FFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 205/690 (29%), Positives = 327/690 (47%), Gaps = 88/690 (12%)

Query: 4   TLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNC---KTLNELKQPHCHILKQGL 60
           TLN   L  A  ++T L+    A  +  +      L  C   K L + +Q H  +LK   
Sbjct: 18  TLNKGTLNPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHARLLKS-- 75

Query: 61  GHKPSYI-SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLG 119
            H  +++ +K++    + G   SL  A K FD       T  T+F +N+++  +   G  
Sbjct: 76  -HLSAFLATKLLHMYEKCG---SLKDAVKVFD-----EMTERTIFTWNAMMGAFVSSGKY 126

Query: 120 VEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE---GVQVHGAIVKMGFDRDVFVE 176
           +EAI LY E+   G+  D  TFP VL AC    A GE   G ++HG  VK GF   VFV 
Sbjct: 127 LEAIELYKEMRVLGVAIDACTFPSVLKAC---GALGESRLGAEIHGVAVKCGFGEFVFVC 183

Query: 177 NCLINFYGECGDIVDGRRVFDE--MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           N LI  YG+CGD+   R +FD   M + + VSW S+I A        EA+ LF  M E G
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVG 243

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           +  N+ T V  +        ++LG  +     +    A+  + NAL+ MY KCG ++ A+
Sbjct: 244 VASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAE 303

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           ++F     R+ V  NT++S  V+  L R+AL    +M     +PD+V++L+ ++AS + G
Sbjct: 304 RVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSG 363

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           +LL G+  H Y +RNGL+    I NT+IDMY KC   +     F+ M  K ++SW ++IA
Sbjct: 364 NLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIA 423

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G  +N                 H+                EA+ LFR +  + + VD + 
Sbjct: 424 GYAQN---------------ECHL----------------EAINLFRKVQVKGMDVDPMM 452

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +  V  AC  L + +  + I+ Y+ K  +  D+ L  A+V+++   G    A + F  + 
Sbjct: 453 IGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIR 511

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS---------- 584
            +D+ +WT+ I      G   +A+ELF  + +  I+PDSI  +  L+A +          
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571

Query: 585 -HGGLVNQGWHL----FRSMTDI--------------HGVSPQ-IVHYGCMVDLLGRAGL 624
            HG L+ +G+ L      S+ D+              H V  + ++ +  M++  G  G 
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631

Query: 625 LGEALDLIKSMPVE---PNDVIWGSLLAAC 651
             EA+ L K M  E   P+ + + +LL AC
Sbjct: 632 GNEAIALFKKMTDENVIPDHITFLALLYAC 661


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/656 (36%), Positives = 373/656 (56%), Gaps = 48/656 (7%)

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           +W+S+I       L   +   F  M    + PN      ++ A   L++ +L   + A  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 266 DELGMKANALMVNALVDMYMKC---------------GAVDTAKQLFGECKDRNLVLCNT 310
             LG+ ++  + NAL++ Y K                  +D  K++F     R++V  NT
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 311 IMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           +++ + + G+  EAL ++ EM  +G  +PD  T+ S +   A+  D+  G+  HGY +RN
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G +G   I +++IDMY KC + E + R                                F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLR-------------------------------AF 285

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
             +P +D ISWN+++ G  Q   F+  +  FR ML E +K   V+   V  AC +L AL 
Sbjct: 286 YILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALS 345

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
           L + ++  I + G   +  +A++LVDM+A+CG+ + A  VF R++KRD+ AWTA I   A
Sbjct: 346 LGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCA 405

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
           M G+   AV LF  ML  G++P  + F+ VLTACSH GLV++GW  F SM    G++P +
Sbjct: 406 MHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGL 465

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMP-VEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
            HY  + DLLGRAG L EA D I +M  V+P   +W  LLAAC+ H++V++A    +++ 
Sbjct: 466 EHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLL 525

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
            +D E  G +VL+SNIY++A +W + AR+R+ M+++G++K P  S IEV  +VH F +GD
Sbjct: 526 SVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGD 585

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           +SHP  + I+  L  +  ++   GYV D   VL DVDE+ K+ LL +HSE+LA+A+G+IS
Sbjct: 586 KSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIIS 645

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           T+    IRV+KN+R+C DCH+  K ++K+  REI VRDN+RFH F+ GSCSC D+W
Sbjct: 646 TTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 221/487 (45%), Gaps = 54/487 (11%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           ++S+I+ Y+   L   + S +  +    + P++  FP +L A T          +H   V
Sbjct: 78  WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137

Query: 166 KMGFDRDVFVENCLINFY------GECGDIVDGR---------RVFDEMSERNVVSWTSL 210
           ++G D D+++ N LIN Y      G+  D+   R         +VFD M  R+VVSW ++
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197

Query: 211 ICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           I   A+  +  EA+ +  EM + G +KP+S T+  ++   A+  ++  G  +  Y    G
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
              +  + ++L+DMY KC  ++ + + F     ++ +  N+I++  V+ G     L    
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            ML    +P  V+  S + A A L  L  GR  HG ++R G +  + I ++++DMY KCG
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCG 377

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             +MA  +FD +  + +V+W ++I G   +G                             
Sbjct: 378 NIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHA--------------------------- 410

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQ 508
                +A+ LF  ML + ++   V  + V +AC + G +D     +  +E++ GI   ++
Sbjct: 411 ----LDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLE 466

Query: 509 LATALVDMFARCGDPQRAMQVFRRME--KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
              A+ D+  R G  + A      M   +   S W+  + A        ++VEL  ++L 
Sbjct: 467 HYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAAC----RAHKSVELAEKVLD 522

Query: 567 QGIKPDS 573
           + +  DS
Sbjct: 523 KLLSVDS 529



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 183/386 (47%), Gaps = 31/386 (8%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSAT-------------LFMYNSLIRGYSCIGLGVE 121
           A + T+     A K FD + K  E+                +  +N++I G++  G+ VE
Sbjct: 150 ALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVE 209

Query: 122 AISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           A+ +  E+   G L PD FT   +L    +     +G ++HG  V+ GFD DVF+ + LI
Sbjct: 210 ALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLI 269

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           + Y +C  +    R F  +  ++ +SW S+I  C +       +  F  M++E +KP +V
Sbjct: 270 DMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAV 329

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           +   VI ACA L  L LG ++   I  LG   N  + ++LVDMY KCG +  A+ +F   
Sbjct: 330 SFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRI 389

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG- 359
             R++V    I+      G A +A+++ + ML  G RP  V  ++ ++A +  G +  G 
Sbjct: 390 DKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGW 449

Query: 360 ----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-----WN 410
                M   + +  GLE + ++     D+  + G+ E A   +D +SN   V      W+
Sbjct: 450 RYFNSMERDFGIAPGLEHYAAVA----DLLGRAGRLEEA---YDFISNMRGVQPTGSVWS 502

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRD 436
            L+A    +  VE A +V  ++   D
Sbjct: 503 ILLAACRAHKSVELAEKVLDKLLSVD 528


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/723 (36%), Positives = 396/723 (54%), Gaps = 45/723 (6%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+LP++ +F  +L++C   S+      +H  + ++GF  DV V   L+  YG CG + + 
Sbjct: 232 GLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDES 291

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             VF+ M+ RN VSW ++I A A+      A  +++ M +EG +PN +T V  + A    
Sbjct: 292 IAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 351

Query: 253 QNLELGDRVC--AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            + +LG+      +I   G++ + ++  ALV MY   GA+D A+  F     +N+V  N 
Sbjct: 352 SSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNA 411

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++ Y   G AREA+ +   M      P++V+ L+ +     + +    R  H  V+ NG
Sbjct: 412 MLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSIHAEVVGNG 468

Query: 371 LEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           L   +S I N ++ M+ + G  E A   FD     TVV                      
Sbjct: 469 LFAQESSIANGVVRMFARSGSLEEAVAAFD----ATVV---------------------- 502

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                +D +SWNT +  L+       A+  F  M  E  + D+ T+V V   C  LG L+
Sbjct: 503 -----KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLE 557

Query: 490 LAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDP-QRAMQVFRRM--EKRDVSAWTAAI 545
           L + I   +     +  D+ +A+A+++M A+CG       ++F RM  +++D+ AW   I
Sbjct: 558 LGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMI 617

Query: 546 GAMAMEGNGEQAVELFNEML-RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
            A A  G+G +A++LF  M  R  ++PDS  FV VL+ CSH GLV  G H F    ++ G
Sbjct: 618 AAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLG 677

Query: 605 VSPQIV-HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
           +  Q V HY C+VD+LGR G L EA D I+ MP+  + V+W SLL AC  + +++    A
Sbjct: 678 IEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERA 737

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK-LPGSSSIEVNGKVH 722
           A    EL    S  +V+LSNIYA+AG+W +  RVR  M E+ ++K +PG SSI V  +VH
Sbjct: 738 ARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVH 797

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           EF + D SHP+ + I + L  +   +R+AGYVPD   VL DV+E++K+ LL +HSEKLA+
Sbjct: 798 EFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAI 857

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF-RQGSCSCS 841
           AFGLIS      IRV+KNLR+C DCH+  K +++V  REI VRD NRFH F + G CSC 
Sbjct: 858 AFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCG 917

Query: 842 DFW 844
           D+W
Sbjct: 918 DYW 920



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 164/643 (25%), Positives = 279/643 (43%), Gaps = 73/643 (11%)

Query: 37  GSLKNC---KTLNELKQPHCHILKQGLGHKP---SYISKVVCTCAQMGTFESLTYAQKAF 90
           G L+ C     L + +Q H  I+KQGL       +Y+ ++   C       SL  A  AF
Sbjct: 29  GLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC------RSLDDANAAF 82

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA---GFGILPDKFTFPFVLNA 147
                    S  +  +N+LI   S          LY  +         P+K T   VL A
Sbjct: 83  SAL-----RSRGIATWNTLIAAQSS---PAAVFDLYTRMKLEERAENRPNKLTIIAVLGA 134

Query: 148 CT----------KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
                       ++ +  +   VH  I     +RD+FV   L++ YG+CG +     VF 
Sbjct: 135 IASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFS 194

Query: 198 EMSERNVVSWTSLICACARRD-LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
            +   +++ W + I ACA  D  P  A+ L   M  EG+ PN  + V ++S+C    +L 
Sbjct: 195 RIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLP 254

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
           L   + A ++ELG   + ++  ALV MY +CG+VD +  +F     RN V  N +++ + 
Sbjct: 255 LARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFA 314

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSA--SAQLGDLLCGRMCHGYVLRNGLEGW 374
           + G    A AI   M   G RP+++T ++A+ A  S+   DL      HG++   GLEG 
Sbjct: 315 QCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGD 374

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             +   ++ MY   G                                ++ AR  F  +P 
Sbjct: 375 VMVGTALVTMYGSTGA-------------------------------IDRARAAFDAIPA 403

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           ++ +SWN ML          EAMELF  M  + +  ++V+ + V   C  +     A+ I
Sbjct: 404 KNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSI 460

Query: 495 YAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           +A +  NG+   +  +A  +V MFAR G  + A+  F     +D  +W   + A++   +
Sbjct: 461 HAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSARED 520

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
              A+  F  M  +G +PD    V V+  C+  G +  G  + + ++    V   +V   
Sbjct: 521 LHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVAS 580

Query: 614 CMVDLLGRAG-LLGEALDLIKSMPVEPNDVI-WGSLLAACQKH 654
            +++++ + G  + E   L   MP +  D++ W +++AA  +H
Sbjct: 581 AVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQH 623



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 235/562 (41%), Gaps = 74/562 (13%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L  C   +   +G Q+H  IVK G  R+  + N L+  Y +C  + D    F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGI--KPNSVTMVCVISACA------ 250
             R + +W +LI A   +  P     L+  M +EE    +PN +T++ V+ A A      
Sbjct: 86  RSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSS 142

Query: 251 ----KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
               +  ++     V   I    ++ +  +  AL+D Y KCG V++A ++F   +  +L+
Sbjct: 143 SSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 202

Query: 307 LCNT-IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
             N  IM+          AL ++  M L G  P+R + ++ +S+      L   R  H  
Sbjct: 203 CWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHAR 262

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           V   G  G   +   ++ MY +CG                                V+ +
Sbjct: 263 VEELGFLGDVVVATALVTMYGRCGS-------------------------------VDES 291

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
             VF  M  R+H+SWN M+    Q      A  ++  M  E  + +++T V    A    
Sbjct: 292 IAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 351

Query: 486 GALDLAK--WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
            + DL +   ++ +I   G+  D+ + TALV M+   G   RA   F  +  +++ +W A
Sbjct: 352 SSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNA 411

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS--------HGGLVNQGWHL 595
            + A    G   +A+ELF  M RQ + P+ + ++ VL  C         H  +V  G  L
Sbjct: 412 MLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNG--L 469

Query: 596 FRSMTDI-HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           F   + I +GV          V +  R+G L EA+    +  V+ + V W + +AA    
Sbjct: 470 FAQESSIANGV----------VRMFARSGSLEEAVAAFDATVVK-DSVSWNTKVAALSAR 518

Query: 655 QNVD--IAAYAAERITELDPEK 674
           +++   I A+   +     P+K
Sbjct: 519 EDLHGAITAFYTMQHEGFRPDK 540


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/743 (34%), Positives = 400/743 (53%), Gaps = 67/743 (9%)

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNVVSWTSLICACARRDLPKEAVYLF 227
            DRD  V N L+  Y  CG +   R VFD M   R++VSWT++    AR    +E++ L 
Sbjct: 80  LDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLI 139

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQ-NLELGDRVCAYIDELGMKANALMV-NALVDMYM 285
            EM+E G+ PN+ T+  V  AC   +    +G  V   + ++G+    + V +AL+DM  
Sbjct: 140 GEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLA 199

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G + +A+++F    ++ +V+   ++S YV+   A EA+ I  + L  G  PDR TM S
Sbjct: 200 RNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSS 259

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE---MACRIFDHMS 402
            +SA  +LG +  G   H   LR G      +   ++DMY K   ++    A ++F+ M 
Sbjct: 260 MISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMR 319

Query: 403 NKTVVSWNSLIAGLIKNG------------------------------------DVESAR 426
              V+SW +LI+G +++G                                    D +S R
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGR 379

Query: 427 EVFSEMPGRD----HISWNTMLGGLTQENMFEEAMELF-----RVMLS-----------E 466
           +V + +   +    H   N ++    +    EEA  +F     R M+S            
Sbjct: 380 QVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDH 439

Query: 467 RIK-----VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           RI      +   T   + SA   +G L   + ++A   K G   D  ++ +LV M++RCG
Sbjct: 440 RIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCG 499

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             + A + F  ++ R+V +WT+ I  +A  G  E+A+ LF++M+  G+KP+ + ++ VL+
Sbjct: 500 YLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLS 559

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV +G   FRSM   HG+ P++ HY CMVDLL R+GL+ EAL+ I  MP++ + 
Sbjct: 560 ACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADA 619

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           ++W +LL AC+ H N+++   AA+ + EL+P     +VLLSN+YA AG W  VAR+R  M
Sbjct: 620 LVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAM 679

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           ++  + K  G S +EV    HEF +GD SHP   +I   L  +   ++  GYVPD + VL
Sbjct: 680 RDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVL 739

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            D+ ++ K+  L  HSEK+A+AFGLI+TS   PIR+ KNLR+C DCHS  K +SK   RE
Sbjct: 740 HDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRRE 799

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           II+RD+NRFH  + G CSC ++W
Sbjct: 800 IILRDSNRFHRMKDGECSCGEYW 822



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 232/483 (48%), Gaps = 60/483 (12%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+K FD  I+      T+ ++  LI  Y       EA+ ++++    G  PD++T  
Sbjct: 204 LASARKVFDGLIEK-----TVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMS 258

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG--DIVD-GRRVFDEM 199
            +++ACT+  +   G+Q+H   ++MGF  D  V   L++ Y +      +D   +VF+ M
Sbjct: 259 SMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERM 318

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFF-EMVEEGIKPNSVTMVCVISACAKLQNLELG 258
            + +V+SWT+LI    +  + +  V + F EM+ E IKPN +T   ++ ACA + + + G
Sbjct: 319 RKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSG 378

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            +V A++ +    A   + NALV MY + G ++ A+++F +  +R+++ C T   +    
Sbjct: 379 RQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRD---- 434

Query: 319 GLAREALAILDEMLLHGPRPD----RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
                  A LD  +    R D      T  S +SA+A +G L  G+  H   L+ G    
Sbjct: 435 -------APLDHRI---GRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSD 484

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N+++ MY +CG  E ACR F+ + ++ V+SW S+I+GL K+G              
Sbjct: 485 RFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHG-------------- 530

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
                              E A+ LF  M+   +K + VT + V SAC ++G +   K  
Sbjct: 531 -----------------YAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEY 573

Query: 495 YAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEG 552
           +  ++++ G+   M+    +VD+ AR G  + A++    M  K D   W   +GA     
Sbjct: 574 FRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHD 633

Query: 553 NGE 555
           N E
Sbjct: 634 NIE 636



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 24/266 (9%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  +++    +Q H H++K       +  + +V   A+ G  E    A++ F+   +
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEE---ARRVFNQLYE 422

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEA-ISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
                       S+I   SCI  G +A +   +     GI     TF  +++A       
Sbjct: 423 -----------RSMI---SCITEGRDAPLDHRIGRMDMGI--SSSTFASLISAAASVGML 466

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
            +G Q+H   +K GF  D FV N L++ Y  CG + D  R F+E+ +RNV+SWTS+I   
Sbjct: 467 TKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGL 526

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID-ELGMKAN 273
           A+    + A+ LF +M+  G+KPN VT + V+SAC+ +  +  G      +  + G+   
Sbjct: 527 AKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPR 586

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGE 299
                 +VD+  + G V  A +   E
Sbjct: 587 MEHYACMVDLLARSGLVKEALEFINE 612


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/770 (34%), Positives = 403/770 (52%), Gaps = 50/770 (6%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIG--LGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           +++ D   S  +  YN LIR YS        + + LY  +    + P+ +TFPF L AC+
Sbjct: 77  HHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
             +    G  +H   +  G   D+FV   L++ Y +C  + D   +F  M  R++V+W +
Sbjct: 137 ALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNA 196

Query: 210 LICACARRDLPKEAV--YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
           ++   A   +   AV   L  +M    ++PN+ T+V ++   A+   L  G  V AY   
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIR 256

Query: 268 LGMKAN----------ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
             +  N           L+  AL+DMY KCG++  A+++F     RN V  + ++  +V 
Sbjct: 257 ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316

Query: 318 LGLAREALAILDEMLLHGP---RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
                +A  +   ML  G     P  +   SA+ A A L  L  G   H  + ++G+   
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHAD 374

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
            +  N+++ MY K                          AGLI     + A  +F EM  
Sbjct: 375 LTAGNSLLSMYAK--------------------------AGLI-----DQAIALFDEMAV 403

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           +D +S++ ++ G  Q    EEA  +F+ M +  ++ D  TMV +  AC +L AL   +  
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +  +   G+  +  +  AL+DM+A+CG    + QVF  M  RD+ +W   I    + G G
Sbjct: 464 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 523

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           ++A  LF EM   G  PD + F+ +L+ACSH GLV +G H F  M   +G++P++ HY C
Sbjct: 524 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC 583

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           MVDLL R G L EA + I+SMP+  +  +W +LL AC+ ++N+D+    +  I EL PE 
Sbjct: 584 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 643

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
           +G  VLLSNIY++AG++   A VR+  K QG +K PG S IE+NG +H F  GD+SHP+ 
Sbjct: 644 TGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 703

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
             I   L  +   ++  GY PD + VL D++E+EK+  L  HSEKLA+A+G++S S+   
Sbjct: 704 PEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKT 763

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           I V KNLR+C DCH+  K +S V  R IIVRD NRFH F+ G CSC DFW
Sbjct: 764 IFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/731 (35%), Positives = 403/731 (55%), Gaps = 43/731 (5%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAF-GEGVQVHGAIVKMGF-DRDVFVENC 178
           EA+ L  E+   G+ P+ FT     +AC     F   G  V G  +K GF   DV V   
Sbjct: 129 EALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCA 188

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           LI+ +   GD+V  R+VF+ + ER VV WT +I    +     +AV LF  M+E+G +P+
Sbjct: 189 LIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPD 248

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG---AVDTAKQ 295
             TM  ++SACA+  +  LG ++ + +  LG+ ++  +   LVDMY K     +++ A++
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARK 308

Query: 296 LFGECKDRNLVLCNTIMSNYVRLG-LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           +F      N++    ++S YV+ G     A+ +L EML     P+ +T  S + A A L 
Sbjct: 309 VFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLS 368

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           D   GR  H  V++  +   + + N ++ MY + G  E A + FD +  + ++S +S I 
Sbjct: 369 DQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG 428

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                              GR + SW++ +          E+M+         + V   T
Sbjct: 429 -----------------ETGRSNASWSSQI----------ESMD---------VGVSTFT 452

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              + SA   +G     + ++A   K G   D  ++ +LV M++RCG    A + F  ME
Sbjct: 453 FASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEME 512

Query: 535 K-RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
              +V +WT+ I A+A  G+ E+A+ LF++M+  G+KP+ + ++ VL+ACSH GLV +G 
Sbjct: 513 DDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGK 572

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
             FRSM   H + P++ HY CMVDLL R+GL+ EAL+ I  MP + + ++W +LL AC+ 
Sbjct: 573 EYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRT 632

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           ++N++I   AA  + +L+P+    +VLLSN+YA  G W  VAR+R  M+ + + K  G S
Sbjct: 633 YENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLS 692

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            + V   +HEF +GD SHP    I + L  +   ++D GYVPD + VL D+ ++ K+  L
Sbjct: 693 WMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCL 752

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
             HSEK+A+AFGLI+T  T PIR+ KNLR+C DCHS  K +SK   REII+RD+NRFH  
Sbjct: 753 LQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRM 812

Query: 834 RQGSCSCSDFW 844
           + G CSC ++W
Sbjct: 813 KDGKCSCGEYW 823



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 229/498 (45%), Gaps = 42/498 (8%)

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNVVSWTSLICACARRDLPKEAVYLF 227
            D D  V N L+  Y +CG +   RRVFD M   R++VSWT++     R    +EA+ L 
Sbjct: 75  LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLL 134

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLE-LGDRVCAYIDELGMKANALMVN-ALVDMYM 285
            EM+E G++PN+ T+     AC   +     G  V  +  + G     + V  AL+DM+ 
Sbjct: 135 GEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFA 194

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G +  A+++F    +R +V+   +++ YV+ G A +A+ +   ML  G  PD  TM S
Sbjct: 195 RNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSS 254

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG-KQEMAC--RIFDHMS 402
            VSA A+ G    G+  H  VLR GL     +   ++DMY K   +Q M C  ++F  M 
Sbjct: 255 MVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMP 314

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
              V+SW +LI+G ++ G                            QEN    A+EL   
Sbjct: 315 THNVMSWTALISGYVQCGG---------------------------QEN---NAVELLCE 344

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML+E I+ + +T   +  AC  L   D  + I+A + K  I     +  ALV M+A  G 
Sbjct: 345 MLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGC 404

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            + A + F ++ +R++ + ++ IG       G       +++    +   +  F  +L+A
Sbjct: 405 MEEARKAFDQLYERNLLSTSSDIGE-----TGRSNASWSSQIESMDVGVSTFTFASLLSA 459

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
            +  GL  +G  L  +++   G          +V +  R G L +A      M  + N +
Sbjct: 460 AATVGLPTKGQQL-HALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVI 518

Query: 643 IWGSLLAACQKHQNVDIA 660
            W S+++A  KH + + A
Sbjct: 519 SWTSIISALAKHGHAERA 536



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 248/544 (45%), Gaps = 72/544 (13%)

Query: 68  SKVVCTCAQMGTFE---SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           + V   CA +  F     L  A+K F+  ++      T+ ++  +I  Y   G   +A+ 
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVER-----TVVVWTLMITRYVQGGCAGKAVE 235

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L++ +   G  PD +T   +++AC +  + G G Q+H  ++++G   D  V   L++ Y 
Sbjct: 236 LFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYT 295

Query: 185 --------ECGDIVDGRRVFDEMSERNVVSWTSLICA---CARRDLPKEAVYLFFEMVEE 233
                   EC      R+VF  M   NV+SWT+LI     C  ++    AV L  EM+ E
Sbjct: 296 KLQMEQSMEC-----ARKVFKRMPTHNVMSWTALISGYVQCGGQE--NNAVELLCEMLNE 348

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
            I+PN +T   ++ ACA L + + G ++ A + +  +    ++ NALV MY + G ++ A
Sbjct: 349 SIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEA 408

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           ++ F +  +RNL+   +  S+    G +  + +   E +  G      T  S +SA+A +
Sbjct: 409 RKAFDQLYERNLL---STSSDIGETGRSNASWSSQIESMDVG--VSTFTFASLLSAAATV 463

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSL 412
           G    G+  H   ++ G E    I N+++ MY +CG  + ACR FD M  +  V+SW S+
Sbjct: 464 GLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSI 523

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I+ L K+G                                 E A+ LF  M+   +K + 
Sbjct: 524 ISALAKHGHA-------------------------------ERALSLFHDMILSGVKPND 552

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQVFR 531
           VT + V SAC ++G +   K  +  ++K+  +   M+    +VD+ AR G  Q A++   
Sbjct: 553 VTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFIN 612

Query: 532 RME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            M  K D   W   +GA     N   GE A     ++  Q   P    +V +    +HGG
Sbjct: 613 EMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAP----YVLLSNLYAHGG 668

Query: 588 LVNQ 591
           L ++
Sbjct: 669 LWDE 672



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 187/408 (45%), Gaps = 44/408 (10%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H  +L+ GL         +V    ++   +S+  A+K F      N  S     + +
Sbjct: 269 QQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMS-----WTA 323

Query: 109 LIRGY-SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
           LI GY  C G    A+ L  E+    I P+  T+  +L AC   S    G Q+H  ++K 
Sbjct: 324 LISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKT 383

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
                  V N L++ Y E G + + R+ FD++ ERN++S +S I    R +    +    
Sbjct: 384 SIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQ--- 440

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            E ++ G+  ++ T   ++SA A +     G ++ A   + G +++  + N+LV MY +C
Sbjct: 441 IESMDVGV--STFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRC 498

Query: 288 GAVDTAKQLFGECK-DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           G +D A + F E + D N++   +I+S   + G A  AL++  +M+L G +P+ VT ++ 
Sbjct: 499 GYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAV 558

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           +SA + +G                               +K GK+       DH     +
Sbjct: 559 LSACSHVG------------------------------LVKEGKEYFRSMQKDHRLIPRM 588

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGL-TQENM 452
             +  ++  L ++G V+ A E  +EMP + D + W T+LG   T EN+
Sbjct: 589 EHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENI 636


>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Cucumis sativus]
          Length = 781

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 369/596 (61%), Gaps = 7/596 (1%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGEC--GDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+   I ++G + D    N L+ F  +   G++    ++F+ + + ++  +  ++   A+
Sbjct: 161 QIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAK 220

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
           R + ++ + LF ++ E+G+ P+  T   V+ A   L+++  G++V  +I + GM  +  +
Sbjct: 221 RGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYV 280

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG- 335
            N+L+DMY +   V+ AK+LF E   R+ V  N ++S YVR     +A+    EM   G 
Sbjct: 281 YNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGN 340

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +PD  T++S +SA   L +L  G   H YV R  L     I N ++DMY KCG   +A 
Sbjct: 341 EKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIAR 399

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            IFD MS K V+ W S+I+G I  GD+  AR++F + P RD + W  M+ G  Q + F++
Sbjct: 400 NIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDD 459

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A+ LFR M  +R+K D+ T+V + + C  LGAL+  KWI+ Y+++N I  D+ + TAL++
Sbjct: 460 AVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIE 519

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+++CG   +++++F  +E +D ++WT+ I  +AM G   +A+ LF+EM R G KPD I 
Sbjct: 520 MYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDIT 579

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F+GVL+ACSHGGLV +G   F SM  +H + P++ HYGC++DLLGRAGLL EA +LI+ +
Sbjct: 580 FIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEI 639

Query: 636 PVEPNDVI---WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           P+E  +++   +G+LL+AC+ H NVD+    A+++  ++   S +H LL+NIYAS  +W 
Sbjct: 640 PIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWE 699

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
           +  +VR +MKE G++K+PG S IEV+G VHEF  GD SHPEM  I SML  +  +L
Sbjct: 700 DAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQL 755



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 165/549 (30%), Positives = 273/549 (49%), Gaps = 77/549 (14%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I  L+NCK++++LKQ    I + GL      I+K++  CA   +  +L YA+K F+Y ++
Sbjct: 147 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCAD-SSLGNLRYAEKIFNY-VQ 204

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D     +LF+YN +++ Y+  G+  + + L+ +L   G+ PD FT+PFVL A        
Sbjct: 205 D----PSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVR 260

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           +G +V G IVK G D D +V N LI+ Y E  ++ + +++FDEM+ R+ VSW  +I    
Sbjct: 261 QGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYV 320

Query: 216 RRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKAN 273
           R    ++A+  F EM +EG  KP+  T+V  +SAC  L+NLELGD +  Y+  ELG    
Sbjct: 321 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR 380

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE---------- 323
             + NAL+DMY KCG ++ A+ +F E   +N++   +++S Y+  G  RE          
Sbjct: 381 --IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPV 438

Query: 324 ---------------------ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
                                A+A+  EM +   +PD+ T+++ ++  AQLG L  G+  
Sbjct: 439 RDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWI 498

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           HGY+  N +     +   +I+MY KCG  + +  IF  + +K   SW S+I GL  NG  
Sbjct: 499 HGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKT 558

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI--KVDRVTMVGVAS 480
             A  +FSEM                                 ER+  K D +T +GV S
Sbjct: 559 SEALRLFSEM---------------------------------ERVGAKPDDITFIGVLS 585

Query: 481 ACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           AC + G ++  +  +  ++K + I   ++    ++D+  R G    A ++ + +   +  
Sbjct: 586 ACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCE 645

Query: 540 AWTAAIGAM 548
                 GA+
Sbjct: 646 IVVPLYGAL 654


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/678 (37%), Positives = 394/678 (58%), Gaps = 51/678 (7%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           DR++   N L++ Y + G+I + R+VFD M ERNVVSWT+L+           A  LF++
Sbjct: 76  DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M E+    N V+   ++     LQ+  + D  C   + +  K N +   +++    K G 
Sbjct: 136 MPEK----NKVSWTVML--IGFLQDGRIDD-ACKLYEMIPDKDN-IARTSMIHGLCKEGR 187

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           VD A+++F E  +R+++   T+++ Y +     +A  I D M      P++  +      
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------PEKTEV------ 235

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                                   W S    M+  Y++ G+ E A  +F+ M  K V++ 
Sbjct: 236 -----------------------SWTS----MLMGYVQNGRIEDAEELFEVMPVKPVIAC 268

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE-EAMELFRVMLSERI 468
           N++I+GL + G++  AR VF  M  R+  SW T++  + + N FE EA++LF +M  + +
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIK-IHERNGFELEALDLFILMQKQGV 327

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           +    T++ + S C  L +L   K ++A + +     D+ +A+ L+ M+ +CG+  ++  
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGG 587
           +F R   +D+  W + I   A  G GE+A+++F EM L    KP+ + FV  L+ACS+ G
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           +V +G  ++ SM  + GV P   HY CMVD+LGRAG   EA+++I SM VEP+  +WGSL
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC+ H  +D+A + A+++ E++PE SG ++LLSN+YAS G+W +VA +R  MK + +R
Sbjct: 508 LGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVR 567

Query: 708 KLPGSSSIEVNGKVHEFTSGD-ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
           K PG S  EV  KVH FT G   SHPE  +I  +L E++  LR+AGY PD +  L DVDE
Sbjct: 568 KSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDE 627

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EK   L +HSE+LA+A+ L+  S+ +PIRV+KNLR+C DCH+  K++SKV +REII+RD
Sbjct: 628 EEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRD 687

Query: 827 NNRFHFFRQGSCSCSDFW 844
            NRFH FR G CSC D+W
Sbjct: 688 ANRFHHFRNGECSCKDYW 705



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 11/235 (4%)

Query: 69  KVVCTCAQM----GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           K V  C  M    G    +  A++ FD   + N+ S     + ++I+ +   G  +EA+ 
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS-----WQTVIKIHERNGFELEALD 317

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L++ +   G+ P   T   +L+ C   ++   G QVH  +V+  FD DV+V + L+  Y 
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMV 243
           +CG++V  + +FD    ++++ W S+I   A   L +EA+ +F EM   G  KPN VT V
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437

Query: 244 CVISACAKLQNLELGDRVCAYIDEL-GMKANALMVNALVDMYMKCGAVDTAKQLF 297
             +SAC+    +E G ++   ++ + G+K        +VDM  + G  + A ++ 
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/740 (34%), Positives = 388/740 (52%), Gaps = 35/740 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F +N ++ GY  +G   EA+ LY  +   G+ PD +TFP VL  C     +  G +VH 
Sbjct: 162 VFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHA 221

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ GF  +V V N L+  Y +CGDIV  R+VFD M+  + +SW ++I         + 
Sbjct: 222 HVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEA 281

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + LF  M+E  ++PN +T+  V  A   L  +     +  +  + G   +    N+L+ 
Sbjct: 282 GLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQ 341

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY   G +  A ++F   + ++ +    ++S Y + G   +AL +   M LH   PD VT
Sbjct: 342 MYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVT 401

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + SA++A A LG L  G   H      G   +  + N +++MY K               
Sbjct: 402 IASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK--------------- 446

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                           +  ++ A EVF  M  +D +SW++M+ G    +   EA+  FR 
Sbjct: 447 ----------------SKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML   +K + VT +   SAC   GAL   K I+AY+ + GI  +  +  AL+D++ +CG 
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              A   F    ++DV +W   +      G G+ A+ LFN+M+  G  PD + FV +L A
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCA 609

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS  G+V QGW LF  MT+   + P + HY CMVDLL R G L EA +LI  MP++P+  
Sbjct: 610 CSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAA 669

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WG+LL  C+ H++V++   AA+ I EL+P     HVLL ++Y  AGKW  VARVR  M+
Sbjct: 670 VWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMR 729

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
           E+G+ +  G S +EV G  H F + DESHP++  I+ +L  +  R++  G+ P  +   L
Sbjct: 730 EKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVES---L 786

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           +  E  +  +L  HSE+LA+AFGLI+T+    I V KN   C  CH   K +S++  REI
Sbjct: 787 EDKEVSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREI 846

Query: 823 IVRDNNRFHFFRQGSCSCSD 842
            VRD  + H F+ G CSC D
Sbjct: 847 TVRDTKQLHCFKDGDCSCGD 866



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 230/498 (46%), Gaps = 44/498 (8%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           ++ H H+L+ G G +   ++ +V   A+ G    +  A+K FD     +  S     +N+
Sbjct: 217 REVHAHVLRFGFGDEVDVLNALVTMYAKCG---DIVAARKVFDGMAVTDCIS-----WNA 268

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +I G+         + L++ +    + P+  T   V  A    S  G   ++HG  VK G
Sbjct: 269 MIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRG 328

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           F  DV   N LI  Y   G + D  ++F  M  ++ +SWT++I    +   P +A+ ++ 
Sbjct: 329 FAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYA 388

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M    + P+ VT+   ++ACA L  L++G ++       G     ++ NAL++MY K  
Sbjct: 389 LMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSK 448

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +D A ++F    ++++V  +++++ +     + EAL     ML H  +P+ VT ++A+S
Sbjct: 449 HIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALS 507

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A A  G L  G+  H YVLR G+     + N ++D+Y+KCG+   A   F   S K VVS
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVS 567

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           WN +++G + +G                       LG +        A+ LF  M+    
Sbjct: 568 WNIMLSGFVAHG-----------------------LGDI--------ALSLFNQMVEMGE 596

Query: 469 KVDRVTMVGVASACGYLGALDLAKW--IYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
             D VT V +  AC   G + +  W   +   EK  I  +++    +VD+ +R G    A
Sbjct: 597 HPDEVTFVALLCACSRAGMV-IQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEA 655

Query: 527 MQVFRRME-KRDVSAWTA 543
             +  RM  K D + W A
Sbjct: 656 YNLINRMPIKPDAAVWGA 673



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 194/437 (44%), Gaps = 34/437 (7%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+    V +   C   + ++ G R CA  D         + NA++ M ++ G +  A ++
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F +  +R++   N ++  Y ++G   EAL +   ML  G RPD  T    +     + D 
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             GR  H +VLR G      + N ++ MY KCG    A ++FD M+    +SWN++IAG 
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGH 273

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            +N + E+                                +ELF  ML   ++ + +T+ 
Sbjct: 274 FENHECEA-------------------------------GLELFLTMLENEVQPNLMTIT 302

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V  A G L  +  AK ++ +  K G   D+    +L+ M+   G    A ++F RME +
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D  +WTA I      G  ++A+E++  M    + PD +     L AC+  G ++ G  L 
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKL- 421

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA-CQKHQ 655
             +    G    +V    ++++  ++  + +A+++ K M  E + V W S++A  C  H+
Sbjct: 422 HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFM-AEKDVVSWSSMIAGFCFNHR 480

Query: 656 NVDIAAYAAERITELDP 672
           + +   Y    +  + P
Sbjct: 481 SFEALYYFRYMLGHVKP 497


>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 369/596 (61%), Gaps = 7/596 (1%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGEC--GDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+   I ++G + D    N L+ F  +   G++    ++F+ + + ++  +  ++   A+
Sbjct: 115 QIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAK 174

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
           R + ++ + LF ++ E+G+ P+  T   V+ A   L+++  G++V  +I + GM  +  +
Sbjct: 175 RGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYV 234

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG- 335
            N+L+DMY +   V+ AK+LF E   R+ V  N ++S YVR     +A+    EM   G 
Sbjct: 235 YNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGN 294

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +PD  T++S +SA   L +L  G   H YV R  L     I N ++DMY KCG   +A 
Sbjct: 295 EKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIAR 353

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            IFD MS K V+ W S+I+G I  GD+  AR++F + P RD + W  M+ G  Q + F++
Sbjct: 354 NIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDD 413

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A+ LFR M  ++IK D+ T+V + + C  LGAL+  KWI+ Y+++N I  D+ + TAL++
Sbjct: 414 AVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIE 473

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+++CG   +++++F  +E +D ++WT+ I  +AM G   +A+ LF+EM R G KPD I 
Sbjct: 474 MYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDIT 533

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F+GVL+ACSHGGLV +G   F SM  +H + P++ HYGC++DLLGRAGLL EA +LI+ +
Sbjct: 534 FIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEI 593

Query: 636 PVEPNDVI---WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           P+E  +++   +G+LL+AC+ H NVD+    A+++  ++   S +H LL+NIYAS  +W 
Sbjct: 594 PIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWE 653

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
           +  +VR +MKE G++K+PG S IEV+G VHEF  GD SHPEM  I SML  +  +L
Sbjct: 654 DAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNRVTGQL 709



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 165/549 (30%), Positives = 273/549 (49%), Gaps = 77/549 (14%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I  L+NCK++++LKQ    I + GL      I+K++  CA   +  +L YA+K F+Y ++
Sbjct: 101 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCAD-SSLGNLRYAEKIFNY-VQ 158

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D     +LF+YN +++ Y+  G+  + + L+ +L   G+ PD FT+PFVL A        
Sbjct: 159 D----PSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVR 214

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           +G +V G IVK G D D +V N LI+ Y E  ++ + +++FDEM+ R+ VSW  +I    
Sbjct: 215 QGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYV 274

Query: 216 RRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKAN 273
           R    ++A+  F EM +EG  KP+  T+V  +SAC  L+NLELGD +  Y+  ELG    
Sbjct: 275 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR 334

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE---------- 323
             + NAL+DMY KCG ++ A+ +F E   +N++   +++S Y+  G  RE          
Sbjct: 335 --IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPV 392

Query: 324 ---------------------ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
                                A+A+  EM +   +PD+ T+++ ++  AQLG L  G+  
Sbjct: 393 RDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWI 452

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           HGY+  N +     +   +I+MY KCG  + +  IF  + +K   SW S+I GL  NG  
Sbjct: 453 HGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKT 512

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI--KVDRVTMVGVAS 480
             A  +FSEM                                 ER+  K D +T +GV S
Sbjct: 513 SEALRLFSEM---------------------------------ERVGAKPDDITFIGVLS 539

Query: 481 ACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           AC + G ++  +  +  ++K + I   ++    ++D+  R G    A ++ + +   +  
Sbjct: 540 ACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCE 599

Query: 540 AWTAAIGAM 548
                 GA+
Sbjct: 600 IVVPLYGAL 608


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/541 (42%), Positives = 333/541 (61%), Gaps = 32/541 (5%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           +L + P PD  T  S + A A L  +L G+  H +V + G E    + N+++D+Y K G 
Sbjct: 118 VLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGC 177

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAG-----------------LIKN-------------- 419
             +A ++FD M  + VVSWN+LI+G                 + KN              
Sbjct: 178 NCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARV 237

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGV 478
           G++E AR++F  MP R+ +SWN M+ G  Q   + +A+ELFR M  E  +  + VT+V V
Sbjct: 238 GNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSV 297

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
            SAC +LGALDL KWI+ +I +N I   + L  AL DM+A+CG    A  VF  M +RDV
Sbjct: 298 LSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDV 357

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W+  I  +AM G   +A   F EM+  G++P+ I F+G+LTAC+H GLV++G   F  
Sbjct: 358 ISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDM 417

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M  ++G++P+I HYGC+VDLL RAG L +A  LI SMP++PN ++WG+LL  C+ +++ +
Sbjct: 418 MPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAE 477

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
                  RI ELD   SG  V L+N+YAS G+  + A  RL+M++    K PG S IE+N
Sbjct: 478 RGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEIN 537

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
             V+EF  GD SHP+   I SM+RE+  +++ AGY P    V+ ++DE+EK+  LS HSE
Sbjct: 538 NSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSE 597

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLA+AFGLI+TS+   IR+VKNLR+C DCH   K++SK+ +REI+VRD +RFH F+ G C
Sbjct: 598 KLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKC 657

Query: 839 S 839
           S
Sbjct: 658 S 658



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 202/461 (43%), Gaps = 75/461 (16%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVE--LAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
            +F YN+L++ +S        IS +    +      PD++TF  VL AC   +   EG +
Sbjct: 89  NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           VH  + K G + ++FV N L++ Y + G     +++FDEM  R+VVSW +LI       +
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             +A  +F  M+E+    N V+   +IS  A++ NLE                       
Sbjct: 209 VDKARMVFDGMMEK----NLVSWSTMISGYARVGNLE----------------------- 241

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RP 338
                        A+QLF     RN+V  N +++ Y +     +A+ +  +M   G   P
Sbjct: 242 ------------EARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAP 289

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           + VT++S +SA A LG L  G+  H ++ RN +E    + N + DMY KCG    A  +F
Sbjct: 290 NDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVF 349

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             M  + V+SW+ +I GL   G    A   F+E                           
Sbjct: 350 HEMHERDVISWSIIIMGLAMYGYANEAFNFFAE--------------------------- 382

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMF 517
               M+ + ++ + ++ +G+ +AC + G +D     +  + +  GI   ++    +VD+ 
Sbjct: 383 ----MIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLL 438

Query: 518 ARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           +R G   +A  +   M  + +V  W A +G   +  + E+ 
Sbjct: 439 SRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERG 479


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/559 (41%), Positives = 339/559 (60%), Gaps = 33/559 (5%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +  A+QLF E       L NTIM  YV+ G+  +A+++  +M   G RPD  T    +
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A A+L +L  G   HG+V+++GLE   ++   ++ MY+K G  E+ C  F         
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFG--ELGCAEF--------- 191

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                               +F  M  RD ++WN ++    Q     +A++ FR M    
Sbjct: 192 --------------------LFGSMVERDLVAWNALIAVCVQTGFSSKALQSFREMGMAG 231

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           IK D VT+V   SACG+LG L+  + IY +  + GI  ++ +  A +DM A+CGD  +AM
Sbjct: 232 IKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAM 291

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            +F  M +R+V +W+  IG  A+ G  E+A+ LF+ M  QG++P+ + F+ VL+ACSH G
Sbjct: 292 NLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTG 351

Query: 588 LVNQGWHLFRSM--TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            VN+GW  F  M  +D   + P+  HY CMVDLLGR+G L EA + IK MP+E +  IWG
Sbjct: 352 RVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWG 411

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC  HQN+ +  + A+ + EL PE +  HVLLSN+YA+AG+W  V +VR +MK++G
Sbjct: 412 ALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKG 471

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
            RK+   SS+E NG++H    GD+SHP+  +I + L ++  +++  GY+P+  +V  DV+
Sbjct: 472 ARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPETDSVFHDVE 531

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           ++EK+  LS HSEKLA+AF LI+ S   PIRV+KNLR+C DCH+F KLVS++  REII+R
Sbjct: 532 DEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRITMREIIMR 591

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D NRFH F+ G CSC DFW
Sbjct: 592 DKNRFHHFKNGICSCKDFW 610



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 199/386 (51%), Gaps = 25/386 (6%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           ++YA++ FD   K        F++N++++GY   G+  +A+S+Y ++   G+ PD FTFP
Sbjct: 85  MSYARQLFDEMHKPRP-----FLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFP 139

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           FV+ AC + +    G+ +HG +VK G +    V   L+  Y + G++     +F  M ER
Sbjct: 140 FVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVER 199

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           ++V+W +LI  C +     +A+  F EM   GIKP+SVT+V  +SAC  L  LE G+ + 
Sbjct: 200 DLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIY 259

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
            +  E G+ +N ++ NA +DM  KCG +D A  LF E   RN++  +T++  Y   G + 
Sbjct: 260 EFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESE 319

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +ALA+   M   G +P+ VT L+ +SA +       GR+  G+   N +   D       
Sbjct: 320 KALALFSRMKNQGVQPNYVTFLAVLSACSH-----TGRVNEGWQYFNFMAQSD------- 367

Query: 383 DMYMKCGKQEMACRI-FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           D  ++  K+  AC +     S     ++N      IK   +E+   ++  + G   I  N
Sbjct: 368 DKNIQPRKEHYACMVDLLGRSGHLEEAYN-----FIKIMPIEADPGIWGALLGACAIHQN 422

Query: 442 TMLGGLTQENMFEEAMEL--FRVMLS 465
             LG    + +FE A E+  + V+LS
Sbjct: 423 IKLGQHVADLLFELAPEIASYHVLLS 448



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 186/386 (48%), Gaps = 40/386 (10%)

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           GD+   R++FDEM +     W +++    +  +P +AV ++ +M   G++P+  T   VI
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            ACA+L  L  G  +  ++ + G++  A +   L+ MY+K G +  A+ LFG   +R+LV
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
             N +++  V+ G + +AL    EM + G +PD VT++SA+SA   LG L  G   + + 
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
              G++    + N  +DM  KCG                               D++ A 
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCG-------------------------------DMDKAM 291

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
            +F EMP R+ ISW+T++GG       E+A+ LF  M ++ ++ + VT + V SAC + G
Sbjct: 292 NLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTG 351

Query: 487 ALDLAKWIY----AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
            ++   W Y    A  +   I    +    +VD+  R G  + A    + M  + D   W
Sbjct: 352 RVN-EGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIW 410

Query: 542 TAAIGAMAMEGN---GEQAVELFNEM 564
            A +GA A+  N   G+   +L  E+
Sbjct: 411 GALLGACAIHQNIKLGQHVADLLFEL 436


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/674 (37%), Positives = 370/674 (54%), Gaps = 47/674 (6%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           RD    N +I+ +   G +   R  FD   E++ VSW  ++ A  R    +EA  LF   
Sbjct: 4   RDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF--- 60

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
                  NS T   VIS                              NAL+  Y++ G +
Sbjct: 61  -------NSRTEWDVIS-----------------------------WNALMSGYVQWGKM 84

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
             A++LF     R++V  N ++S Y R G   EA  + D      P  D  T  + VS  
Sbjct: 85  SEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA----APVRDVFTWTAVVSGY 140

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           AQ G L   R     +       W    N M+  Y++    + A  +F+ M  + V SWN
Sbjct: 141 AQNGMLEEARRVFDAMPERNAVSW----NAMVAAYIQRRMMDEAKELFNMMPCRNVASWN 196

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           +++ G  + G +E A+ VF  MP +D +SW  ML   +Q    EE ++LF  M      V
Sbjct: 197 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 256

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           +R     V S C  + AL+    ++  + + G      +  AL+ M+ +CG+ + A   F
Sbjct: 257 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 316

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
             ME+RDV +W   I   A  G G++A+E+F+ M     KPD I  VGVL ACSH GLV 
Sbjct: 317 EEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVE 376

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G   F SM    GV+ +  HY CM+DLLGRAG L EA DL+K MP EP+  +WG+LL A
Sbjct: 377 KGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGA 436

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
            + H+N ++   AAE+I EL+PE +G++VLLSNIYAS+GKW +  ++R+ M+E+G++K+P
Sbjct: 437 SRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVP 496

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G S IEV  KVH F++GD  HPE   I + L +++ R++ AGYV     VL DV+E+EK+
Sbjct: 497 GFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKE 556

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
           ++L +HSEKLA+A+G+++     PIRV+KNLR+C DCH+  K +S +  R I++RD+NRF
Sbjct: 557 HMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRF 616

Query: 831 HFFRQGSCSCSDFW 844
           H FR GSCSC D+W
Sbjct: 617 HHFRGGSCSCGDYW 630



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 183/450 (40%), Gaps = 103/450 (22%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           ++D    N ++  Y   G + + R +F+  +E +V+SW +L+    +     EA  LF  
Sbjct: 34  EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR 93

Query: 230 MVEEGIKPNSV---------------------------TMVCVISACAKLQNLELGDRVC 262
           M    +   ++                           T   V+S  A+   LE   RV 
Sbjct: 94  MPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVF 153

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
             + E     NA+  NA+V  Y++   +D AK+LF     RN+   NT+++ Y + G+  
Sbjct: 154 DAMPE----RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLE 209

Query: 323 EALAILDEMLLHGPRPDRVT---MLSA--------------------------------V 347
           EA A+ D M    P+ D V+   ML+A                                +
Sbjct: 210 EAKAVFDTM----PQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVL 265

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           S  A +  L CG   HG ++R G      + N ++ MY KCG  E A   F+ M  + VV
Sbjct: 266 STCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVV 325

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SWN++IAG  ++G                                 +EA+E+F +M +  
Sbjct: 326 SWNTMIAGYARHG-------------------------------FGKEALEIFDMMRTTS 354

Query: 468 IKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            K D +T+VGV +AC + G ++    + Y+     G+    +  T ++D+  R G    A
Sbjct: 355 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA 414

Query: 527 MQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
             + + M  + D + W A +GA  +  N E
Sbjct: 415 HDLMKDMPFEPDSTMWGALLGASRIHRNPE 444



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           AQ G  E    A+  FD   + +  S     + +++  YS  G   E + L++E+   G 
Sbjct: 203 AQAGMLEE---AKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETLQLFIEMGRCGE 254

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
             ++  F  VL+ C   +A   G+Q+HG +++ G+    FV N L+  Y +CG++ D R 
Sbjct: 255 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 314

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
            F+EM ER+VVSW ++I   AR    KEA+ +F  M     KP+ +T+V V++AC+    
Sbjct: 315 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 374

Query: 255 LELG-DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           +E G     +   + G+ A       ++D+  + G +  A  L
Sbjct: 375 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 417



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 158/376 (42%), Gaps = 68/376 (18%)

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           P  D VT    +S+ A  G +   R             W    N M+  Y++ G+ E A 
Sbjct: 2   PVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSW----NGMLAAYVRNGRVEEAR 57

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            +F+  +   V+SWN+L++G ++ G +  ARE+F  MPGRD +SWN M+ G  +     E
Sbjct: 58  GLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVE 117

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCD-------- 506
           A  LF          D  T   V S     G L+ A+ ++ A  E+N +  +        
Sbjct: 118 ARRLFDAAPVR----DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ 173

Query: 507 ---MQLATALVDM---------------FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
              M  A  L +M               +A+ G  + A  VF  M ++D  +W A + A 
Sbjct: 174 RRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY 233

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWHL-- 595
           +  G  E+ ++LF EM R G   +   F  VL+ C+           HG L+  G+ +  
Sbjct: 234 SQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGC 293

Query: 596 ----------FR--SMTDIHGVSPQ-----IVHYGCMVDLLGRAGLLGEAL---DLIKSM 635
                     F+  +M D      +     +V +  M+    R G   EAL   D++++ 
Sbjct: 294 FVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTT 353

Query: 636 PVEPNDVIWGSLLAAC 651
             +P+D+    +LAAC
Sbjct: 354 STKPDDITLVGVLAAC 369



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 70/321 (21%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           ++ T   +  +N+L+ GY   G   EA  L+  + G     D  ++  +++   +     
Sbjct: 61  NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMV 116

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           E  ++  A       RDVF    +++ Y + G + + RRVFD M ERN VSW +++ A  
Sbjct: 117 EARRLFDAAPV----RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 172

Query: 216 RRDLPKEAVYLF--------------------FEMVEEG-------IKPNSVTMVCVISA 248
           +R +  EA  LF                      M+EE         + ++V+   +++A
Sbjct: 173 QRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 232

Query: 249 CAK-------LQ-NLELGD--------------RVCAYID--ELGMKANALMV------- 277
            ++       LQ  +E+G                 CA I   E GM+ +  ++       
Sbjct: 233 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 292

Query: 278 ----NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
               NAL+ MY KCG ++ A+  F E ++R++V  NT+++ Y R G  +EAL I D M  
Sbjct: 293 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 352

Query: 334 HGPRPDRVTMLSAVSASAQLG 354
              +PD +T++  ++A +  G
Sbjct: 353 TSTKPDDITLVGVLAACSHSG 373


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/676 (36%), Positives = 378/676 (55%), Gaps = 48/676 (7%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           +R+    N L++ Y + G I + R+VFD+M ERNVVSWTS++    +  L  EA  LF+ 
Sbjct: 75  ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWR 134

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M E+ +   +V                                   M+  L++     G 
Sbjct: 135 MPEKNVVSWTV-----------------------------------MLGGLIE----DGR 155

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           VD A++LF     +++V    ++      G   EA  I DEM    P+ + V   S +S 
Sbjct: 156 VDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEM----PQRNVVAWTSMISG 211

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            A    +   R     +       W      M+  Y + G+   A  +F  M  K V + 
Sbjct: 212 YAMNNKVDVARKLFEVMPDKNEVTW----TAMLKGYTRSGRINEAAELFKAMPVKPVAAC 267

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N +I G   NG+V  AR VF +M  +D  +W+ ++    ++    EA+ LF +M  E ++
Sbjct: 268 NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +  +++ + S CG L +LD  + +++ + ++    D+ +++ L+ M+ +CGD     +V
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRV 387

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F R   +D+  W + I   A  G GE+A+E+F+EM   G  PD I F+GVL+AC + G V
Sbjct: 388 FDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKV 447

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +G  +F SM   + V  +  HY CMVDLLGRAG L EA++LI++MPVE + ++WG+LL+
Sbjct: 448 KEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLS 507

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC+ H+N+D+A  AA+++ +L+P  +G ++LLSN+YAS  +W +VA +R  M+ + + K 
Sbjct: 508 ACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKS 567

Query: 710 PGSSSIEVNGKVHEFT-SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
           PG S IEV+ KVH FT  G  SHPE   I   L ++   LR+AGY PD + V+ DVDE++
Sbjct: 568 PGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEED 627

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K + L HHSEK+A+A+GL+      PIRV+KNLR+C DCHS  KL+++V  REII+RD N
Sbjct: 628 KVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDAN 687

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F+ G CSC DFW
Sbjct: 688 RFHHFKDGLCSCRDFW 703



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 89/153 (58%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +++LI+ Y   G  +EA++L+  +   G+ P+  +   +L+ C   ++   G QVH  +V
Sbjct: 298 WSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLV 357

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +  FD D++V + LI  Y +CGD+V G+RVFD  S +++V W S+I   A+    ++A+ 
Sbjct: 358 RSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALE 417

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           +F EM   G  P+ +T + V+SAC     ++ G
Sbjct: 418 VFHEMFSSGAAPDEITFIGVLSACGYTGKVKEG 450



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 22/191 (11%)

Query: 34  PSIGS-LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCT----CAQMGTFESLTY 85
           PSI S L  C +L  L   +Q H  +++        Y+S V+ T    C  + T      
Sbjct: 331 PSIISILSVCGSLASLDHGRQVHSQLVRSHFDLD-IYVSSVLITMYIKCGDLVT------ 383

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
            ++ FD +     +S  + M+NS+I GY+  G G +A+ ++ E+   G  PD+ TF  VL
Sbjct: 384 GKRVFDRF-----SSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVL 438

Query: 146 NACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERN 203
           +AC  +    EG+++  ++  K   D+      C+++  G  G + +   + + M  E +
Sbjct: 439 SACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEAD 498

Query: 204 VVSWTSLICAC 214
            + W +L+ AC
Sbjct: 499 AIVWGALLSAC 509


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/761 (33%), Positives = 415/761 (54%), Gaps = 39/761 (5%)

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF-PFVLNA 147
           A D +  D      +  + SLI  ++  G   +A+ L+ ++   G+ PD+ TF   +L  
Sbjct: 69  ALDVF--DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKW 126

Query: 148 CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
             +     EG +VH  I++ G++ D  V N ++  YG+CGD+     VFD + + NV SW
Sbjct: 127 SGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSW 186

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV-CAYID 266
           T +I A A+     E + L   M + G+KP+  T   V+ AC  +  LE    +  A I 
Sbjct: 187 TIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATIS 246

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
             G+  +A +  AL+++Y KCGA++ A  +F +  ++++V  +++++ + + G A+ A+ 
Sbjct: 247 STGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQ 306

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +L  M L G RP+ VT ++ + A   L     G+  H  +++ G    D +C T   + M
Sbjct: 307 LLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYS--DDVCLTSALVKM 364

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
            C                   +W          G VE+AR +F     RD +SW++M+ G
Sbjct: 365 YC-------------------NW----------GWVETARSIFESSRERDVVSWSSMIAG 395

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
            +Q      A+ LFR M  + ++ + VT V    AC  +GAL     ++  +   G+  D
Sbjct: 396 YSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKD 455

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + +ATALV+++ +CG  + A  VF  M+K+++  WT+   A    G+G ++++L + M  
Sbjct: 456 VPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMEL 515

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           QG+KPD IVFV +L +C++ G +++G H +  MT   G++P + H GCMVD+LGRAG L 
Sbjct: 516 QGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLE 575

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYA 686
            A  LI +M  E + + W  LL AC+ H +   AA AAE+I +L+P+ +  +VLLS+++ 
Sbjct: 576 AAEQLINTMKFE-SSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFC 634

Query: 687 SAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE--MNNISSMLREM 744
           +AG W      R +M  +G+++L G SSIE+  +VHEF +  +  P   +  I + L ++
Sbjct: 635 AAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKL 694

Query: 745 NCRLRDAGYVPDLTNV-LLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
              ++ AGYVPD T V L DV+E  K+  + +HSE LA+  G+IST    P+R+ KNLR+
Sbjct: 695 GREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRM 754

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH   K VSK+  R I VRD  R H F  G CSC D+W
Sbjct: 755 CSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 252/514 (49%), Gaps = 40/514 (7%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRD-----VFVENCLINFYGECGDIVDGRRVFDE 198
           +L AC+   A  EG +VHG +++    +D       +EN +I  Y  CG       VFD 
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV-ISACAKLQNLEL 257
           M ++NVV+WTSLI A        +A+ LF +M+  G+ P+ +T   + +    + +NL+ 
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G RV ++I + G + + +++N +V+MY KCG V+ A  +F   +D N+     I++ Y +
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQ 195

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDS 376
            G   E L +L  M   G +PD  T  + + A   +G L   ++ H   + + GL+   +
Sbjct: 196 NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAA 255

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +   +I++Y KCG  E A  +F  + NK +VSW+S+IA   ++G  +S            
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKS------------ 303

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                              A++L  +M  E ++ + VT V V  A   L A    K I+A
Sbjct: 304 -------------------AIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHA 344

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            I + G   D+ L +ALV M+   G  + A  +F    +RDV +W++ I   +   +  +
Sbjct: 345 RIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPAR 404

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A+ LF EM   G++P+S+ FV  + AC+  G + +G  L   +  + G+   +     +V
Sbjct: 405 ALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCL-GLDKDVPVATALV 463

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +L G+ G L EA  +   M  + N + W S+  A
Sbjct: 464 NLYGKCGRLEEAEAVFLGMK-KKNLLTWTSIAMA 496



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 236/501 (47%), Gaps = 41/501 (8%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           + L+E K+ H HI++ G       ++ VV    + G  E    A   FD     N     
Sbjct: 131 RNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQ---AGNVFDSIQDPN----- 182

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F +  +I  Y+  G  +E + L   +   G+ PD +TF  VL ACT   A  E   +H 
Sbjct: 183 VFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHA 242

Query: 163 A-IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           A I   G DRD  V   LIN YG+CG + +   VF ++  +++VSW+S+I A A+    K
Sbjct: 243 ATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAK 302

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            A+ L   M  EG++PN+VT V V+ A   L+  + G  + A I + G   +  + +ALV
Sbjct: 303 SAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALV 362

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            MY   G V+TA+ +F   ++R++V  +++++ Y +      AL++  EM + G +P+ V
Sbjct: 363 KMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSV 422

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T +SA+ A A +G L  G   H  V   GL+    +   ++++Y KCG+ E A  +F  M
Sbjct: 423 TFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGM 482

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             K +++W S+     +NG                H S                +++L  
Sbjct: 483 KKKNLLTWTSIAMAYGQNG----------------HGS---------------RSLKLLH 511

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARC 520
            M  + +K D +  V +  +C Y G +      Y  + ++ GI   ++    +VD+  R 
Sbjct: 512 GMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRA 571

Query: 521 GDPQRAMQVFRRMEKRDVSAW 541
           G  + A Q+   M+     AW
Sbjct: 572 GKLEAAEQLINTMKFESSLAW 592



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 224/503 (44%), Gaps = 72/503 (14%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKAN-----ALMVNALVDMYMKCGAVDTAKQLFGE 299
           +++AC+ L+ L  G RV   +    +  +     +L+ N ++ MY++CG  D A  +F  
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA-VSASAQLGDLLC 358
            KD+N+V   +++S +   G   +A+ +  +MLL G  PDR+T  S  +  S +  +L  
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G+  H ++++ G EG   + N +++MY KCG  E A  +FD + +  V SW  +IA   +
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQ 195

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           NG                                  E + L   M    +K D  T   V
Sbjct: 196 NGHC-------------------------------MEVLRLLSRMNQAGVKPDGYTFTTV 224

Query: 479 ASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
             AC  +GAL+ AK ++ A I   G+  D  + TAL++++ +CG  + A  VF +++ +D
Sbjct: 225 LGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKD 284

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HG 586
           + +W++ I A A  G  + A++L   M  +G++P+++ FV VL A +           H 
Sbjct: 285 IVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHA 344

Query: 587 GLVNQG-----------------WHLFRSMTDIHGVSPQ--IVHYGCMVDLLGRAGLLGE 627
            +V  G                 W    +   I   S +  +V +  M+    +      
Sbjct: 345 RIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPAR 404

Query: 628 ALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS-GVHVLLSN 683
           AL L + M    V+PN V + S + AC     +       ER+  L  +K   V   L N
Sbjct: 405 ALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVN 464

Query: 684 IYASAGKWTNVARVRLQMKEQGI 706
           +Y   G+      V L MK++ +
Sbjct: 465 LYGKCGRLEEAEAVFLGMKKKNL 487



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 200/405 (49%), Gaps = 20/405 (4%)

Query: 35  SIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           ++G+L+  K L+        I   GL    +  + ++    + G  E      +AF  ++
Sbjct: 230 AVGALEEAKILHA-----ATISSTGLDRDAAVGTALINLYGKCGALE------EAFGVFV 278

Query: 95  K-DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           + DN+    +  ++S+I  ++  G    AI L + +   G+ P+  TF  VL A T   A
Sbjct: 279 QIDNKD---IVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKA 335

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
           F  G ++H  IV+ G+  DV + + L+  Y   G +   R +F+   ER+VVSW+S+I  
Sbjct: 336 FQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAG 395

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            ++ + P  A+ LF EM  +G++PNSVT V  I ACA +  L  G ++   +  LG+  +
Sbjct: 396 YSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKD 455

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +  ALV++Y KCG ++ A+ +F   K +NL+   +I   Y + G    +L +L  M L
Sbjct: 456 VPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMEL 515

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQE 392
            G +PD +  ++ + +    G +  G   +  + ++ G+      C  M+D+  + GK E
Sbjct: 516 QGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLE 575

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDV----ESAREVFSEMP 433
            A ++ + M  ++ ++W  L+     + D      +A ++F   P
Sbjct: 576 AAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAEKIFQLEP 620



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 30/205 (14%)

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ-----LATALVDMF 517
           M +  I+ +      + +AC  L AL   K ++  + +  +  D +     L   ++ M+
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            RCG    A+ VF RM+ ++V AWT+ I A    G+   A+ LF +ML  G+ PD I F 
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 578 GVLTACS------------HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
            +L   S            H  ++  G+   R + ++            +V++ G+ G +
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNL------------VVEMYGKCGDV 168

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAA 650
            +A ++  S+  +PN   W  ++AA
Sbjct: 169 EQAGNVFDSIQ-DPNVFSWTIIIAA 192


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/770 (34%), Positives = 404/770 (52%), Gaps = 50/770 (6%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIG--LGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           +++ D   S  +  YN LIR YS        + + LY  +    + P+ +TFPF L AC+
Sbjct: 77  HHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
             +    G  +H   +  G   D+FV   L++ Y +C  + D   +F  M  R++V+W +
Sbjct: 137 ALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNA 196

Query: 210 LICACARRDLPKEAV--YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
           ++   A   +   AV   L  +M    ++PN+ T+V ++   A+   L  G  V AY   
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIR 256

Query: 268 LGMKAN----------ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
             + +N           L+  AL+DMY KCG++  A+++F     RN V  + ++  +V 
Sbjct: 257 ACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316

Query: 318 LGLAREALAILDEMLLHGP---RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
                +A  +   ML  G     P  +   SA+ A A L  L  G   H  + ++G+   
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVHAD 374

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
            +  N+++ MY K                          AGLI     + A  +F EM  
Sbjct: 375 LTAGNSLLSMYAK--------------------------AGLI-----DQAIALFDEMAV 403

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           +D +S++ ++ G  Q    EEA  +F+ M +  ++ D  TMV +  AC +L AL   +  
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +  +   G+  +  +  AL+DM+A+CG    + QVF  M  RD+ +W   I    + G G
Sbjct: 464 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 523

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           ++A  LF EM   G  PD + F+ +L+ACSH GLV +G H F  M   +G++P++ HY C
Sbjct: 524 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYIC 583

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           MVDLL R G L EA + I+SMP+  +  +W +LL AC+ ++N+D+    +  I EL PE 
Sbjct: 584 MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 643

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
           +G  VLLSNIY++AG++   A VR+  K QG +K PG S IE+NG +H F  GD+SHP+ 
Sbjct: 644 TGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 703

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
             I   L  +   ++  GY PD + VL D++E+EK+  L  HSEKLA+A+G++S S+   
Sbjct: 704 PEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKT 763

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           I V KNLR+C DCH+  K +S +  R IIVRD NRFH F+ G CSC DFW
Sbjct: 764 IFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/555 (41%), Positives = 343/555 (61%), Gaps = 34/555 (6%)

Query: 293 AKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSAS 350
           A ++F +  K  N+ + NT++  Y  +G +  A ++  EM + G   PD  T    + A 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
             + D+  G   H  V+R+G      + N+++ +Y  CG                     
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG--------------------- 170

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                     DV SA +VF +MP +D ++WN+++ G  +    EEA+ L+  M S+ IK 
Sbjct: 171 ----------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           D  T+V + SAC  +GAL L K ++ Y+ K G+  ++  +  L+D++ARCG  + A  +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGGLV 589
             M  ++  +WT+ I  +A+ G G++A+ELF  M   +G+ P  I FVG+L ACSH G+V
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +G+  FR M + + + P+I H+GCMVDLL RAG + +A + IKSMP++PN VIW +LL 
Sbjct: 341 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 400

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC  H + D+A +A  +I +L+P  SG +VLLSN+YAS  +W++V ++R QM   G++K+
Sbjct: 401 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 460

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S +EV  +VHEF  GD+SHP+ + I + L+EM  RLR  GYVP ++NV +DV+E+EK
Sbjct: 461 PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEK 520

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +  + +HSEK+A+AF LIST +  PI VVKNLR+C DCH   KLVSKVY+REI+VRD +R
Sbjct: 521 ENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+ GSCSC D+W
Sbjct: 581 FHHFKNGSCSCQDYW 595



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 205/391 (52%), Gaps = 17/391 (4%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISK-VVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           ++ +L+Q H   ++ G+    + + K ++     + +   ++YA K F       E    
Sbjct: 29  SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFS----KIEKPIN 84

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVH 161
           +F++N+LIRGY+ IG  + A SLY E+   G++ PD  T+PF++ A T  +    G  +H
Sbjct: 85  VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             +++ GF   ++V+N L++ Y  CGD+    +VFD+M E+++V+W S+I   A    P+
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ L+ EM  +GIKP+  T+V ++SACAK+  L LG RV  Y+ ++G+  N    N L+
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LLHGPRPDR 340
           D+Y +CG V+ AK LF E  D+N V   +++      G  +EA+ +   M    G  P  
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 324

Query: 341 VTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           +T +  + A +  G +  G     RM   Y +   +E +      M+D+  + G+ + A 
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF----GCMVDLLARAGQVKKAY 380

Query: 396 RIFDHMS-NKTVVSWNSLIAGLIKNGDVESA 425
                M     VV W +L+     +GD + A
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411


>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/589 (39%), Positives = 349/589 (59%), Gaps = 18/589 (3%)

Query: 164 IVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           +V  G   D F  + LI F    E  D+     +       N  SW   I      + P+
Sbjct: 1   MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 60

Query: 222 EAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           EAV L+  +++ +G KP++ T   +  ACA+L  + +G  +  ++  LG  ++  + NA+
Sbjct: 61  EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 120

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           + + + CG +D A+++F +   R+LV  N++++ YVR G A EAL    EM + G +PD 
Sbjct: 121 IHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDE 180

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           VTM+  VS+ AQL DL  GR  H Y+  NGL+    + N ++DMYMKCG  E A ++FD 
Sbjct: 181 VTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDS 240

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M+NKT+VSW +++               F EMP +D + WN M+GG    N  +EA+ LF
Sbjct: 241 MTNKTMVSWTTML---------------FDEMPDKDVVPWNAMIGGYVHANRGKEALALF 285

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
             M +  I  D VTMV   SAC  LGALD+  WI+ YIEK+ +  ++ L TAL+DM+A+C
Sbjct: 286 NEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKC 345

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           G   +A+QVF+ +  R+   WTA I  +A+ GN   A+  F+EM+   + PD + F+G+L
Sbjct: 346 GKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLL 405

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
           +AC HGGLV +G   F  M+    +SP++ HY CMVDLLGRAGLL EA +LIKSMP+E +
Sbjct: 406 SACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEAD 465

Query: 641 DVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQ 700
            V+WG+L  AC+ H NV +   AA ++ ++DP  SG++VLL+N+Y  A  W    + R  
Sbjct: 466 AVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKL 525

Query: 701 MKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
           M+++G+ K PG SSIEVNG V+EF   D+SHP+   I   L ++  +L 
Sbjct: 526 MRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLE 574



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 260/519 (50%), Gaps = 59/519 (11%)

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
           S+++  CA +  +  L Y        I  N  +   F +N  IRG+       EA+ LY 
Sbjct: 14  SRLIAFCA-ISEWRDLDYCTN-----ILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYK 67

Query: 128 E-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
             L   G  PD +T+P +  AC + S    G ++ G ++ +GFD D+FV N +I+    C
Sbjct: 68  RVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSC 127

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           GD+   R++FD+   R++VSW S+I    RR    EA+  + EM  EGIKP+ VTM+ V+
Sbjct: 128 GDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVV 187

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ----------- 295
           S+CA+L++L+LG     YI+E G+K    + NAL+DMYMKCG +++A++           
Sbjct: 188 SSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMV 247

Query: 296 -----LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
                LF E  D+++V  N ++  YV     +EALA+ +EM      PD VTM+S +SA 
Sbjct: 248 SWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSAC 307

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           +QLG L  G   H Y+ ++ L    ++   +IDMY KCGK   A ++F  +  +  ++W 
Sbjct: 308 SQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWT 367

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++I+GL  +G+   A   FSE                               M+   +  
Sbjct: 368 AIISGLALHGNAHGAIAYFSE-------------------------------MIDNSVMP 396

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           D VT +G+ SAC + G ++  +  ++ +  K  +   ++  + +VD+  R G  + A ++
Sbjct: 397 DEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEEL 456

Query: 530 FRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
            + M  + D   W A   A  + GN   GE+A     +M
Sbjct: 457 IKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQM 495


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/765 (32%), Positives = 402/765 (52%), Gaps = 95/765 (12%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C ++  F +   +H  I+K     + F+ N LI+ Y + G I    +VFD+M   N
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEM--------------------VEEGIKP------ 237
           + SW +++ A ++     E  YLF  M                    + + +K       
Sbjct: 75  LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134

Query: 238 -------NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY------ 284
                  N +T   ++   +K   ++LG ++  ++ + G  +   + + LVDMY      
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194

Query: 285 -------------------------MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
                                    M+CG V+ +K+LF E ++R+ +   ++++ + + G
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           L R+A+ I  EM L   + D+ T  S ++A   +  L  G+  H Y++R   +    + +
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVAS 314

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++DMY KC                                +++SA  VF +M  ++ +S
Sbjct: 315 ALVDMYCKCK-------------------------------NIKSAEAVFKKMTCKNVVS 343

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           W  ML G  Q    EEA++ F  M    I+ D  T+  V S+C  L +L+     +A   
Sbjct: 344 WTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARAL 403

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
            +G+   + ++ ALV ++ +CG  + + ++F  +  +D   WTA +   A  G   + + 
Sbjct: 404 TSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIG 463

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF  ML  G+KPD + F+GVL+ACS  GLV +G  +F SM + HG+ P   HY CM+DL 
Sbjct: 464 LFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLF 523

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            RAG + EA + I  MP  P+ + W +LL++C+ + N+DI  +AAE + ELDP  +  +V
Sbjct: 524 SRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYV 583

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLS++YA+ GKW  VAR+R  M+++G+RK PG S I+   +VH F++ D+S+P  + I S
Sbjct: 584 LLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYS 643

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L ++N ++   GYVPD+ +VL DV + EK  +L+HHSEKLA+AFGL+     +PIRVVK
Sbjct: 644 ELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVK 703

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+  K +SK+ +REI+VRD  RFH F+ G+CSC DFW
Sbjct: 704 NLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/600 (37%), Positives = 350/600 (58%), Gaps = 32/600 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++  C   + L  G  V A+I +   + + +M N L++MY KCG+++ A+++F +   R+
Sbjct: 66  LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
            V   T++S Y +     +AL   ++ML  G  P+  T+ S + A+A      CG   HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           + ++ G +    + + ++D+Y + G                                ++ 
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGL-------------------------------MDD 214

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A+ VF  +  R+ +SWN ++ G  + +  E+A+ELF+ ML +  +    +   +  AC  
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
            G L+  KW++AY+ K+G          L+DM+A+ G    A ++F R+ KRDV +W + 
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           + A A  G G++AV  F EM R GI+P+ I F+ VLTACSH GL+++GWH +  M    G
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DG 393

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + P+  HY  +VDLLGRAG L  AL  I+ MP+EP   IW +LL AC+ H+N ++ AYAA
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           E + ELDP+  G HV+L NIYAS G+W + ARVR +MKE G++K P  S +E+   +H F
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 513

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            + DE HP+   I+    E+  ++++ GYVPD ++V++ VD+QE++  L +HSEK+A+AF
Sbjct: 514 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 573

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            L++T     I + KN+R+C DCH+  KL SKV  REIIVRD NRFH F+ G+CSC D+W
Sbjct: 574 ALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 209/429 (48%), Gaps = 32/429 (7%)

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           +L G  I  D+  +  +L  CT      +G  VH  I++  F  D+ + N L+N Y +CG
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            + + R+VF++M +R+ V+WT+LI   ++ D P +A+  F +M+  G  PN  T+  VI 
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           A A  +    G ++  +  + G  +N  + +AL+D+Y + G +D A+ +F   + RN V 
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N +++ + R     +AL +   ML  G RP   +  S   A +  G L  G+  H Y++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           ++G +      NT++DMY K G    A +IFD ++ + VVSWNSL+    ++G       
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF------ 343

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                 G++ + W            FEE       M    I+ + ++ + V +AC + G 
Sbjct: 344 ------GKEAVWW------------FEE-------MRRVGIRPNEISFLSVLTACSHSGL 378

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIG 546
           LD     Y  ++K+GI  +      +VD+  R GD  RA++    M     +A W A + 
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438

Query: 547 AMAMEGNGE 555
           A  M  N E
Sbjct: 439 ACRMHKNTE 447



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 211/444 (47%), Gaps = 24/444 (5%)

Query: 17  VTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQP---HCHILKQGLGHKPSYISKVVC 72
           + T +N  +    P D     +L K C     L Q    H HIL+    H     + ++ 
Sbjct: 44  LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
             A+ G+ E    A+K F+   + +        + +LI GYS      +A+  + ++  F
Sbjct: 104 MYAKCGSLEE---ARKVFEKMPQRD-----FVTWTTLISGYSQHDRPCDALLFFNQMLRF 155

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G  P++FT   V+ A         G Q+HG  VK GFD +V V + L++ Y   G + D 
Sbjct: 156 GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           + VFD +  RN VSW +LI   ARR   ++A+ LF  M+ +G +P+  +   +  AC+  
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             LE G  V AY+ + G K  A   N L+DMY K G++  A+++F     R++V  N+++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL- 371
           + Y + G  +EA+   +EM   G RP+ ++ LS ++A +  G L  G   +  + ++G+ 
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395

Query: 372 -EGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SA 425
            E W  +  T++D+  + G    A R  + M    T   W +L+     + + E    +A
Sbjct: 396 PEAWHYV--TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453

Query: 426 REVFS---EMPGRDHISWNTMLGG 446
             VF    + PG   I +N    G
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASG 477



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 26/205 (12%)

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           I  DR     +   C     L   + ++A+I ++    D+ +   L++M+A+CG  + A 
Sbjct: 56  IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS--- 584
           +VF +M +RD   WT  I   +       A+  FN+MLR G  P+      V+ A +   
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175

Query: 585 --------HGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLGRAGLLGEALDLIKSM 635
                   HG  V  G+                VH G  ++DL  R GL+ +A  +  ++
Sbjct: 176 RGCCGHQLHGFCVKCGF-------------DSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIA 660
               NDV W +L+A   +    + A
Sbjct: 223 ESR-NDVSWNALIAGHARRSGTEKA 246


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/686 (36%), Positives = 378/686 (55%), Gaps = 60/686 (8%)

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISAC 249
           D R VFDE   R    WT  I  CARR    + +  F EM+ EG   PN+  +  V+  C
Sbjct: 63  DARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCC 122

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV--- 306
           A + ++E G RV  ++   G+  + ++ NA++DMY KCG  + A+++FG   +R+ V   
Sbjct: 123 AGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWN 182

Query: 307 ----LC------------------------NTIMSNYVRLGLAREALAILDEMLLHGPRP 338
                C                        NTI+S  +R G A +AL+ L  M   G   
Sbjct: 183 IAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVF 242

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +  T  +A   +  L     GR  HG VL   LEG   + ++++DMY KCG  E A  +F
Sbjct: 243 NHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVF 302

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           DH        W+ L   +                    + +W+TM+ G  Q    EEA++
Sbjct: 303 DH--------WSPLTRDM--------------------NFAWSTMVAGYVQNGREEEALD 334

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LFR ML E +  DR T+  VA+AC  +G ++  + ++  +EK     D  LA+A+VDM+A
Sbjct: 335 LFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYA 394

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG+ + A  +F R   ++++ WT+ + + A  G G  A+ELF  M  + + P+ I  VG
Sbjct: 395 KCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVG 454

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL+ACSH GLV++G   F+ M + +G+ P I HY C+VDL GR+GLL +A + I+   + 
Sbjct: 455 VLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNIN 514

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
              ++W +LL+AC+ HQ+ + A  A+E++ +L+   +G +V+LSNIYA+  KW +   +R
Sbjct: 515 HEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELR 574

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
           + M+E+ +RK PG S I +   VH F +GD SHP+   I + L ++  RL++ GY     
Sbjct: 575 VSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTD 634

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            V+ DV++++++  L  HSEKLA+AFG+IST    P+R+ KNLR+C DCH   K +S   
Sbjct: 635 LVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLAT 694

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            REI+VRD  RFH F+  SCSC DFW
Sbjct: 695 GREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 222/537 (41%), Gaps = 75/537 (13%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAF 154
           D   + T  ++   I G +  G   + +  + E+   G   P+ F    V+  C      
Sbjct: 69  DERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDV 128

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G +VHG +++ G   DV + N +++ Y +CG     RRVF  M+ER+ VSW   I AC
Sbjct: 129 ESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGAC 188

Query: 215 ARRDLPKEAVYLFFE-------------------------------MVEEGIKPNSVTMV 243
            +      ++ LF E                               M + G+  N  T  
Sbjct: 189 IQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYS 248

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE---- 299
                   L   +LG ++   +    ++ +A + ++L+DMY KCG ++ A  +F      
Sbjct: 249 TAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPL 308

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
            +D N    +T+++ YV+ G   EAL +   ML  G   DR T+ S  +A A +G +  G
Sbjct: 309 TRDMNFAW-STMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQG 367

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R  HG V +   +    + + ++DMY KCG  E A  IFD    K +  W S++     +
Sbjct: 368 RQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASH 427

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G             GR                    A+ELF  M +E++  + +T+VGV 
Sbjct: 428 GQ------------GRI-------------------AIELFERMTAEKMTPNEITLVGVL 456

Query: 480 SACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRD 537
           SAC ++G +   +  +  + E+ GI   ++    +VD++ R G   +A           +
Sbjct: 457 SACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHE 516

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
              W   + A  +  + E A +L +E L Q  + D+    G     S+    N  WH
Sbjct: 517 AIVWKTLLSACRLHQHNEYA-KLASEKLVQLEQCDA----GSYVMLSNIYATNNKWH 568



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 3/218 (1%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A   FD++     T    F +++++ GY   G   EA+ L+  +   G+  D+FT  
Sbjct: 295 LEAAASVFDHW--SPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLT 352

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            V  AC       +G QVHG + K+ +  D  + + +++ Y +CG++ D R +FD    +
Sbjct: 353 SVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTK 412

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N+  WTS++C+ A     + A+ LF  M  E + PN +T+V V+SAC+ +  +  G+   
Sbjct: 413 NIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYF 472

Query: 263 AYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
             + +E G+  +    N +VD+Y + G +D AK    E
Sbjct: 473 KQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEE 510


>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
 gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
 gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
 gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
 gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
          Length = 632

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/563 (39%), Positives = 346/563 (61%), Gaps = 6/563 (1%)

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y   G +  +  LF +  D +L L    ++     GL  +A  +  ++L     P+  T 
Sbjct: 74  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            S + + +       G++ H +VL+ GL     +   ++D+Y K G    A ++FD M  
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           +++VS  ++I    K G+VE+AR +F  M  RD +SWN M+ G  Q     +A+ LF+ +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249

Query: 464 LSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           L+E + K D +T+V   SAC  +GAL+  +WI+ +++ + I  ++++ T L+DM+++CG 
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLT 581
            + A+ VF    ++D+ AW A I   AM G  + A+ LFNEM    G++P  I F+G L 
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           AC+H GLVN+G  +F SM   +G+ P+I HYGC+V LLGRAG L  A + IK+M ++ + 
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           V+W S+L +C+ H +  +    AE +  L+ + SG++VLLSNIYAS G +  VA+VR  M
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           KE+GI K PG S+IE+  KVHEF +GD  H +   I +MLR+++ R++  GYVP+   VL
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            D++E EK+  L  HSE+LA+A+GLIST    P+++ KNLR+C DCH+  KL+SK+  R+
Sbjct: 550 QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRK 609

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I++RD NRFH F  GSCSC DFW
Sbjct: 610 IVMRDRNRFHHFTDGSCSCGDFW 632



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 214/468 (45%), Gaps = 59/468 (12%)

Query: 13  ATPTVTTLTNQHKAKTT-------PKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPS 65
           ++P + T   Q++  TT       P        +   ++++E+ Q H  IL+  L   P 
Sbjct: 3   SSPLLATSLPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPR 62

Query: 66  YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
           Y    +       +   + ++   F   I  +     LF++ + I   S  GL  +A  L
Sbjct: 63  YPVLNLKLHRAYASHGKIRHSLALFHQTIDPD-----LFLFTAAINTASINGLKDQAFLL 117

Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           YV+L    I P++FTF  +L +C+  S    G  +H  ++K G   D +V   L++ Y +
Sbjct: 118 YVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAK 173

Query: 186 CGDIVDGRRVFDEMSER-------------------------------NVVSWTSLICAC 214
            GD+V  ++VFD M ER                               ++VSW  +I   
Sbjct: 174 GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGY 233

Query: 215 ARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           A+   P +A+ LF +++ EG  KP+ +T+V  +SAC+++  LE G  +  ++    ++ N
Sbjct: 234 AQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLN 293

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML- 332
             +   L+DMY KCG+++ A  +F +   +++V  N +++ Y   G +++AL + +EM  
Sbjct: 294 VKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQG 353

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           + G +P  +T +  + A A  G +  G      M   Y ++  +E +      ++ +  +
Sbjct: 354 ITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY----GCLVSLLGR 409

Query: 388 CGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
            G+ + A     +M+ +   V W+S++     +GD    +E+   + G
Sbjct: 410 AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIG 457


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 357/599 (59%), Gaps = 31/599 (5%)

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           IS   K +N+    +V A +   G+  + ++ N L+ M  K   + TA  LF + ++R+ 
Sbjct: 7   ISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDP 66

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  + ++  +V+ G          E++  G +PD  ++   + A      L+ GR+ H  
Sbjct: 67  VSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHST 126

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           VL+NGL   + +C+T++DMY KCG                                +++A
Sbjct: 127 VLKNGLHLDNFVCSTLVDMYAKCGM-------------------------------IDNA 155

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           +++F  MP +D ++   M+ G  +     E+  LF  M  +    D+V MV + +AC  L
Sbjct: 156 KQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKL 215

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
           GA++ A+ ++ Y+       D++L TA++DM+A+CG    + ++F RME+++V +W+A I
Sbjct: 216 GAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMI 275

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
           GA    G G +A+ELF+ ML  GI P+ I F+ +L ACSH GLV+ G  LF  M+  +GV
Sbjct: 276 GAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGV 335

Query: 606 SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAE 665
            P + HY CMVDLLGRAG L +AL LI++M VE ++ IW + L AC+ H+ VD+A  AA+
Sbjct: 336 RPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAK 395

Query: 666 RITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFT 725
            +  L  +  G ++LLSNIYA+AG+W +VA++R  M ++ ++K+PG + IEV+  ++ F 
Sbjct: 396 LLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFG 455

Query: 726 SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
           +GD SH   N I  ML+ ++ +L  AGYVPD  +VL DVDE+ K  +L  HSEKLA+AFG
Sbjct: 456 AGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFG 515

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LI+T    PIR+ KNLR+C DCHSF KLVS +  R+IIVRD NRFH F++G CSC D+W
Sbjct: 516 LIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 186/371 (50%), Gaps = 17/371 (4%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I +L  C+ + ++KQ H  +   G+ H     +K++  CA+    + L  A   F+   +
Sbjct: 7   ISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAK---HKDLVTAHLLFNKMEE 63

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S     ++ +I G+   G        + EL   G  PD F+ PFV+ AC  +    
Sbjct: 64  RDPVS-----WSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLI 118

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G  +H  ++K G   D FV + L++ Y +CG I + +++FD M ++++V+ T +I   A
Sbjct: 119 MGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYA 178

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
               P E+  LF +M  +G  P+ V MV +++ACAKL  +     V  Y+       +  
Sbjct: 179 ECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVE 238

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  A++DMY KCG++D+++++F   + +N++  + ++  Y   G  REAL +   ML  G
Sbjct: 239 LGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSG 298

Query: 336 PRPDRVTMLSAVSASAQLGDL-----LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
             P+R+T +S + A +  G +     L   M   Y +R  ++ +      M+D+  + G+
Sbjct: 299 IIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHY----TCMVDLLGRAGR 354

Query: 391 QEMACRIFDHM 401
            + A R+ ++M
Sbjct: 355 LDQALRLIENM 365


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/738 (34%), Positives = 392/738 (53%), Gaps = 33/738 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F +N ++ GY   G   EA+ LY  +   G  PD +TFP VL +C        G +VH 
Sbjct: 160 VFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHA 219

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ G   +V V N L+  Y +CGD+   R+VFD MS  + +SW ++I         + 
Sbjct: 220 HVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEA 279

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + LF  M+E+ ++PN +T+  V  A   L +L+    + A   + G   +    N+L+ 
Sbjct: 280 GLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQ 339

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY   G +  A  +F   + R+ +    ++S Y + G   +AL +   M ++   PD VT
Sbjct: 340 MYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVT 399

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + SA++A A LG L  G   H      G   +  + N +++MY K               
Sbjct: 400 VASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAK--------------- 444

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                           +  +E A EVF  MP +D ISW++M+ G    +   EA+  FR 
Sbjct: 445 ----------------SKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRH 488

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML++ +K + VT +   +AC   G+L   K I+A++ + GI  +  +  AL+D++ +CG 
Sbjct: 489 MLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQ 547

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              A   F     +DV +W   +      G+G+ A+  FNEML  G  PD + FV +L  
Sbjct: 548 TGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCG 607

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS  G+V+QGW LF SMT+ + + P + HY CMVDLL R G L E  + I  MP+ P+  
Sbjct: 608 CSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAA 667

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WG+LL  C+ H+N+++   AA+ + EL+P  +G HVLLS++YA AG W  V++VR  M+
Sbjct: 668 VWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMR 727

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
            +G+    G S +EV G +H F + DESHP++  I+ +L  +  R++ +G+ P + +  L
Sbjct: 728 VKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAP-VESYSL 786

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           +  E  K  +L  HSE+LA+AFGLI+T+    I V KN   C  CH   +++SK+  REI
Sbjct: 787 EDKEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREI 846

Query: 823 IVRDNNRFHFFRQGSCSC 840
            VRD   FH FR GSCSC
Sbjct: 847 TVRDTKEFHHFRDGSCSC 864



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 240/537 (44%), Gaps = 54/537 (10%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L++C  + +L   ++ H H+L+ GLG +   ++ +V   A+ G  E+   A+K F     
Sbjct: 202 LRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEA---ARKVF----- 253

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D  +      +N++I G+         + L++ +    + P+  T   V  A    S   
Sbjct: 254 DGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLD 313

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
              ++H   VK GF  DV   N LI  Y   G + +   VF  M  R+ +SWT++I    
Sbjct: 314 FAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYE 373

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +   P +A+ ++  M    + P+ VT+   ++ACA L  L++G ++       G     +
Sbjct: 374 KNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIV 433

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + NALV+MY K   ++ A ++F    D++++  +++++ +       EAL     ML   
Sbjct: 434 VANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA-D 492

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+ VT ++A++A A  G L CG+  H +VLR G+     + N ++D+Y+KCG+   A 
Sbjct: 493 VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAW 552

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM----PGRDHISWNTMLGGLTQEN 451
             F     K VVSWN ++AG + +G  + A   F+EM       D +++  +L G ++  
Sbjct: 553 AQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAG 612

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
           M  +  ELF  M                                   EK  I  +++   
Sbjct: 613 MVSQGWELFHSM----------------------------------TEKYSIVPNLKHYA 638

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
            +VD+ +R G          RM    D + W A +    +  N   GE A ++  E+
Sbjct: 639 CMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLEL 695


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 650

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/644 (36%), Positives = 371/644 (57%), Gaps = 49/644 (7%)

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM--YMKCGAVDTAKQLFGECKDR 303
           IS   K +++    ++ ++  ++G+ ++ L  N ++      + G ++ A Q+F      
Sbjct: 11  ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHP 70

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           ++ + NT++  Y ++      +++   ML    +PDR T   ++    +   L  G+   
Sbjct: 71  SMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELL 130

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL------- 416
            + +++G +    +    I M+  CG  ++A ++FD      VV+WN +++G        
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQFK 190

Query: 417 -------------IKN-----------------------GDVESAREVFSEMPGRDHISW 440
                        +K+                       G+++ A+ VF  M  RD +SW
Sbjct: 191 ISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSW 250

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
             M+ G  + N F  A+ LFR M    +K D  TMV +  AC  LGAL+L +W+   I+K
Sbjct: 251 TAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDK 310

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           N    D  +  ALVDM+ +CG+ ++A +VF+ M ++D   WT  I  +A+ G+GE+A+ +
Sbjct: 311 NSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAM 370

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F+ M+   + PD I ++GVL AC    +V++G   F +MT  HG+ P + HYGCMVDLLG
Sbjct: 371 FSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLG 426

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
             G L EAL++I +MPV+PN ++WGS L AC+ H+NV +A  AA++I EL+PE   V+VL
Sbjct: 427 CVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENGAVYVL 486

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           L NIYA++ KW N+ +VR  M E+GI+K PG S +E+NG V+EF +GD+SHP+   I + 
Sbjct: 487 LCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAK 546

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L  M   L  AGY PD + V LD+ E++K+  L  HSEKLA+A+ LIS+   + IR+VKN
Sbjct: 547 LENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGVTIRIVKN 606

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH  AKLVS+ Y+RE+IV+D  RFH FR GSCSC++FW
Sbjct: 607 LRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCNNFW 650



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 244/530 (46%), Gaps = 75/530 (14%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           +SP I  L+ CK++ +LKQ H H +K GL   P + ++V+  C    +  ++ YA + FD
Sbjct: 8   ESP-ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHES-GNMNYAHQVFD 65

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
                     ++F++N++I+GYS I      +S+Y+ +    I PD+FTFPF L   T+ 
Sbjct: 66  TI-----PHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRD 120

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
            A   G ++    VK GFD ++FV+   I+ +  CG +    +VFD      VV+W  ++
Sbjct: 121 MALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIML 180

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVT-MVCVISACAKLQNLELGDRVCAYIDELGM 270
               R                  +K   ++ M+ V+SAC+KL++LE G  +  YI+    
Sbjct: 181 SGYNR------------------VKQFKISKMLLVLSACSKLKDLEWGKHIFKYIN---- 218

Query: 271 KANALMVNALVD-MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
                    +V+ M+  CG +D A+ +F   K R++V    ++  Y+R+     ALA+  
Sbjct: 219 -------GGIVEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFR 271

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           EM +   +PD  TM+S + A A LG L  G      + +N  +    + N ++DMY KCG
Sbjct: 272 EMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCG 331

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
               A ++F  M  K   +W ++I GL  NG                             
Sbjct: 332 NVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHG--------------------------- 364

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQ 508
               EEA+ +F  M+   +  D +T +GV  AC     +D  K  +  +  ++GI   + 
Sbjct: 365 ----EEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVT 416

Query: 509 LATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
               +VD+    G  + A++V   M  K +   W + +GA  +  N + A
Sbjct: 417 HYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLA 466


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/723 (36%), Positives = 394/723 (54%), Gaps = 45/723 (6%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+LP++ +F  +L++C   S+      +H  + ++GF  DV V   L+  YG CG + + 
Sbjct: 228 GLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDES 287

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             VF+ M+ RN VSW ++I A A+      A  +++ M +EG +PN +T V  + A    
Sbjct: 288 IAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 347

Query: 253 QNLELGDRVC--AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            + +LG+      +I   G++ + ++  ALV MY   GA+D A+  F     +N+V  N 
Sbjct: 348 SSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNA 407

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++ Y   G AREA+ +   M      P++V+ L+ +     + +    R  H  V+ NG
Sbjct: 408 MLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSIHAEVVGNG 464

Query: 371 LEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           L   +S I N ++ M+ + G  E A   FD     TVV                      
Sbjct: 465 LFAQESSIANGVVRMFARSGSLEEAMAAFD----ATVV---------------------- 498

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                +D +SWNT +  L+       A+  F  M  E  + D+ T+V V   C  LG L+
Sbjct: 499 -----KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLE 553

Query: 490 LAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDP-QRAMQVFRRM--EKRDVSAWTAAI 545
           L + I   +     +  D+ + +A+++M A+CG       ++F RM  +++D+ AW   I
Sbjct: 554 LGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMI 613

Query: 546 GAMAMEGNGEQAVELFNEML-RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
            A A  G+G +A++LF  M  R  ++PDS  FV VL+ CSH GLV  G H F    ++ G
Sbjct: 614 AAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLG 673

Query: 605 VSPQIV-HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
           +  Q V HY C+VD+LGR G L EA D I+ MP+  + V+W SLL AC  + +++    A
Sbjct: 674 IEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERA 733

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK-LPGSSSIEVNGKVH 722
           A    EL    S  +V+LSNIYA+AG+W +  RVR  M E+ ++K  PG SSI V  +VH
Sbjct: 734 ARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVH 793

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           EF + D SHP+ + I + L  +   +R+AGYVPD   VL DV+E++K+ LL +HSEKLA+
Sbjct: 794 EFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAI 853

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF-RQGSCSCS 841
           AFGLIS      IRV+KNLR+C DCH+  K +++V  REI VRD NRFH F + G CSC 
Sbjct: 854 AFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCG 913

Query: 842 DFW 844
           D+W
Sbjct: 914 DYW 916



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 164/639 (25%), Positives = 276/639 (43%), Gaps = 69/639 (10%)

Query: 37  GSLKNC---KTLNELKQPHCHILKQGLGHKP---SYISKVVCTCAQMGTFESLTYAQKAF 90
           G L+ C     L + +Q H  I+KQGL       +Y+ ++   C       SL  A  AF
Sbjct: 29  GLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC------RSLDDANAAF 82

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA---GFGILPDKFTFPFVLNA 147
                    S  +  +N+LI   S          LY  +         P++ T   VL A
Sbjct: 83  SAL-----RSRGIATWNTLIAAQSS---PAAVFDLYTRMKLEERAENRPNRLTIIAVLGA 134

Query: 148 CTKSSAF------GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
                         +   VH  I     +RD+FV   L++ YG+CG +     VF  +  
Sbjct: 135 IASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV 194

Query: 202 RNVVSWTSLICACARRD-LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            +++ W + I ACA  D  P  A+ L   M  EG+ PN  + V ++S+C    +L L   
Sbjct: 195 PDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS 254

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           + A ++ELG   + ++  ALV MY +CG+VD +  +F     RN V  N +++ + + G 
Sbjct: 255 IHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGH 314

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSA--SAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
              A AI   M   G RP+++T ++A+ A  S+   DL      HG++   GLEG   + 
Sbjct: 315 RSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVG 374

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
             ++ MY   G                                ++ AR  F  +P ++ +
Sbjct: 375 TALVTMYGSTGA-------------------------------IDRARAAFDAIPAKNIV 403

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SWN ML          EAMELF  M  + +  ++V+ + V   C  +     A+ I+A +
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARSIHAEV 460

Query: 499 EKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             NG+   +  +A  +V MFAR G  + AM  F     +D  +W   + A++   +   A
Sbjct: 461 VGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGA 520

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +  F  M  +G +PD    V V+  C+  G +  G  + + ++    V   +V    +++
Sbjct: 521 ITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMN 580

Query: 618 LLGRAG-LLGEALDLIKSMPVEPNDVI-WGSLLAACQKH 654
           ++ + G  + E   L   MP +  D++ W +++AA  +H
Sbjct: 581 MVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQH 619



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 237/558 (42%), Gaps = 70/558 (12%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L  C   +   +G Q+H  IVK G  R+  + N L+  Y +C  + D    F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGI--KPNSVTMVCVISACAKLQ-NL 255
             R + +W +LI A   +  P     L+  M +EE    +PN +T++ V+ A A    + 
Sbjct: 86  RSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 256 ELGDRVCAYI--DEL---GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
               R  A I  D++    ++ +  +  AL+D Y KCG V++A ++F   +  +L+  N 
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNA 202

Query: 311 -IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            IM+          AL ++  M L G  P+R + ++ +S+      L   R  H  V   
Sbjct: 203 AIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEEL 262

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G  G   +   ++ MY +CG                                V+ +  VF
Sbjct: 263 GFLGDVVVATALVTMYGRCGS-------------------------------VDESIAVF 291

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
             M  R+H+SWN M+    Q      A  ++  M  E  + +++T V    A     + D
Sbjct: 292 EAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQD 351

Query: 490 LAK--WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L +   ++ +I   G+  D+ + TALV M+   G   RA   F  +  +++ +W A + A
Sbjct: 352 LGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTA 411

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS--------HGGLVNQGWHLFRSM 599
               G   +A+ELF  M RQ + P+ + ++ VL  C         H  +V  G  LF   
Sbjct: 412 YGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNG--LFAQE 469

Query: 600 TDI-HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           + I +GV          V +  R+G L EA+    +  V+ + V W + +AA    +++ 
Sbjct: 470 SSIANGV----------VRMFARSGSLEEAMAAFDATVVK-DSVSWNTKVAALSAREDLH 518

Query: 659 --IAAYAAERITELDPEK 674
             I A+   +     P+K
Sbjct: 519 GAITAFYTMQHEGFRPDK 536


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/691 (36%), Positives = 388/691 (56%), Gaps = 56/691 (8%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+  AI     DRD F    +++ Y   GD+ + + VFD M   ++ SWT+L+ A A   
Sbjct: 13  QIFDAIA----DRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSG 68

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             +EA  LF  M E  +    +    +++  A   N+E        + E  + A   M+ 
Sbjct: 69  HHEEAKTLFDTMQERDL----IAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLA 124

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           A  +     G ++ A++ F +  +RNL    +++S Y R G  + A  + D M    P  
Sbjct: 125 ANAER----GQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSM----PEW 176

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           + V   +          +L G    G V+R                         A R F
Sbjct: 177 NLVAWTA----------MLTGYSLSGDVVR-------------------------AKRAF 201

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           D M  + +++W ++++    NG +   RE+F  MP RD ISW TM+  L + ++ EE+ E
Sbjct: 202 DSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKE 261

Query: 459 LFRVM-----LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           LF  M     LS+ +  +RVT + +  AC +LGAL   + I+A + + G   D+ ++ AL
Sbjct: 262 LFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNAL 321

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           V+ + RCG    A  VF  M +RDV +W++ I A A  G  ++A+EL++ ML +G  PD 
Sbjct: 322 VNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDD 381

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I+F+ VL ACS+ G+V      FRS+     V P + HY CMVD+LGRAG L +A DL++
Sbjct: 382 IIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLR 441

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
            MP  P  +++ ++L+AC+ + +V+    AAE + ELDPE S  ++ L+NIY++A +  +
Sbjct: 442 LMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKD 501

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
            AR+R  M+E+GI+K PG S IEV  +VHEF +GD+ HP+ + I + ++ +  ++++AGY
Sbjct: 502 AARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGY 561

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
             D   VL DV+E EK+ LL +HSEKLA+AFGLIST    P+R+VKNLR+C DCH+  K+
Sbjct: 562 FQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKV 621

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +SKV  REI+VRD NRFH F+ G CSC+D+W
Sbjct: 622 ISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 178/385 (46%), Gaps = 27/385 (7%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           M+ + G V+ A+Q+F    DR+      ++S Y R G    A  + D M    PR    +
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRM----PRWSLGS 56

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHM 401
             + +SA A     L G       L + ++  D I  T M+ +       E A   FD M
Sbjct: 57  WTALLSAFA-----LSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQM 111

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             + +V+W +++A   + G +E+ARE F +MP R+  SW ++L    +    + A  +F 
Sbjct: 112 PERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFD 171

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M    +      +   A   GY  + D+ +   A+   +    D+   TA++  +A  G
Sbjct: 172 SMPEWNL------VAWTAMLTGYSLSGDVVRAKRAF--DSMPERDLIAWTAMLSAYAFNG 223

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-----QGIKPDSIVF 576
             +   ++F+RM +RD+ +W   + A+      E++ ELF+ M R     +G+ P+ + F
Sbjct: 224 HLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTF 283

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           + +L ACS  G + +G  +  ++ +  G    +V    +V+  GR G LG+A  +   M 
Sbjct: 284 ITLLDACSFLGALAEGRKIHAAVAE-RGFDTDLVVSNALVNFYGRCGALGDAKIVFDGM- 341

Query: 637 VEPNDVI-WGSLLAACQKHQNVDIA 660
               DVI W S+++A  +   VD A
Sbjct: 342 -RRRDVISWSSMISAFAQRGRVDEA 365



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 1/166 (0%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+ P++ TF  +L+AC+   A  EG ++H A+ + GFD D+ V N L+NFYG CG + D 
Sbjct: 275 GMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDA 334

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           + VFD M  R+V+SW+S+I A A+R    EA+ L+  M+ EG  P+ +  + V+ AC+  
Sbjct: 335 KIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNS 394

Query: 253 QNLEL-GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
             +E  GD   + + +  ++        +VD+  + G +  A+ L 
Sbjct: 395 GVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLL 440


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/719 (34%), Positives = 378/719 (52%), Gaps = 37/719 (5%)

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
           +++AG  I P  + + F +  C    A  +G   H  + +M  + + F++NC++  Y +C
Sbjct: 71  MDIAGISINPRSYEYLFKM--CGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILQMYCDC 127

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
                  R FD++ +R++ SW ++I A        EAV LF  M++ GI PN      +I
Sbjct: 128 KSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLI 187

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            + A    L+LG ++ + +  +   A+  +   + +MY+KCG +D A+    +   ++ V
Sbjct: 188 MSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAV 247

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
            C  +M  Y +    R+AL +  +M+  G   D       + A A LGDL  G+  H Y 
Sbjct: 248 ACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYC 307

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           ++ GLE   S+   ++D Y+KC +                                E+AR
Sbjct: 308 IKLGLESEVSVGTPLVDFYVKCAR-------------------------------FEAAR 336

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
           + F  +   +  SW+ ++ G  Q   F+ A+E+F+ + S+ + ++      +  AC  + 
Sbjct: 337 QAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVS 396

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
            L     I+A   K G+   +   +A++ M+++CG    A Q F  ++K D  AWTA I 
Sbjct: 397 DLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIIC 456

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
           A A  G   +A+ LF EM   G++P+ + F+G+L ACSH GLV +G     SMTD +GV+
Sbjct: 457 AHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVN 516

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           P I HY CM+D+  RAGLL EAL++I+SMP EP+ + W SLL  C   +N++I   AA+ 
Sbjct: 517 PTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADN 576

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
           I  LDP  S  +V++ N+YA AGKW   A+ R  M E+ +RK    S I V GKVH F  
Sbjct: 577 IFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVV 636

Query: 727 GDESHPEMNNISSMLREMNCRLRDA-GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
           GD  HP+   I S L+E+N   +     + +  N L D  E++ + L   HSE+LA+A+G
Sbjct: 637 GDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDFTERKDQLL--DHSERLAIAYG 694

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LI T+   PI V KN R C DCH FAK VS V  RE++VRD NRFH    G CSC D+W
Sbjct: 695 LICTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHHINSGECSCRDYW 753



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 233/515 (45%), Gaps = 49/515 (9%)

Query: 39  LKNCKTLNELKQPHC-HILKQGLGHKPSYISKVV----CTCAQMGTFESLTYAQKAFDYY 93
            K C TL  L      H   Q + +   +I   +    C C      +S T A++ FD  
Sbjct: 87  FKMCGTLGALSDGKLFHNRLQRMANSNKFIDNCILQMYCDC------KSFTAAERFFDKI 140

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           +  + +S     + ++I  Y+  G   EA+ L++ +   GI+P+   F  ++ +    S 
Sbjct: 141 VDRDLSS-----WATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSM 195

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G Q+H  ++++ F  D+ +E  + N Y +CG +       ++M+ ++ V+ T L+  
Sbjct: 196 LDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVG 255

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             +    ++A+ LF +M+ EG++ +      ++ ACA L +L  G ++ +Y  +LG+++ 
Sbjct: 256 YTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE 315

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +   LVD Y+KC   + A+Q F    + N    + +++ Y + G    AL +   +  
Sbjct: 316 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRS 375

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G   +     +   A + + DL+CG   H   ++ GL  + S  + MI MY KCGK + 
Sbjct: 376 KGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDY 435

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A + F  +     V+W ++I     +G    A  +F EM G                   
Sbjct: 436 AHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSG----------------- 478

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCDMQLATA 512
                         ++ + VT +G+ +AC + G +   K ++ +  +K G++  +     
Sbjct: 479 --------------VRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNC 524

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIG 546
           ++D+++R G    A++V R M  + DV +W + +G
Sbjct: 525 MIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLG 559



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 170/369 (46%), Gaps = 16/369 (4%)

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           L+ GY+      +A+ L+ ++   G+  D F F  +L AC        G Q+H   +K+G
Sbjct: 252 LMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG 311

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            + +V V   L++FY +C      R+ F+ + E N  SW++LI    +      A+ +F 
Sbjct: 312 LESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFK 371

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            +  +G+  NS     +  AC+ + +L  G ++ A   + G+ A     +A++ MY KCG
Sbjct: 372 TIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCG 431

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            VD A Q F      + V    I+  +   G A EAL +  EM   G RP+ VT +  ++
Sbjct: 432 KVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLN 491

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           A +  G +  G+     M   Y +   ++ +    N MID+Y + G    A  +   M  
Sbjct: 492 ACSHSGLVKEGKQFLDSMTDKYGVNPTIDHY----NCMIDIYSRAGLLLEALEVIRSMPF 547

Query: 403 NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
              V+SW SL+ G     ++E    +A  +F   P  D  ++  M         ++EA +
Sbjct: 548 EPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDP-LDSATYVIMFNLYALAGKWDEAAQ 606

Query: 459 LFRVMLSER 467
            FR M++ER
Sbjct: 607 -FRKMMAER 614



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 1/162 (0%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N  L  L ++    +  E  R M    I ++  +   +   CG LGAL   K  +  +++
Sbjct: 49  NLHLISLAKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQR 108

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
              + +  +   ++ M+  C     A + F ++  RD+S+W   I A   EG  ++AV L
Sbjct: 109 MA-NSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGL 167

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           F  ML  GI P+  +F  ++ + +   +++ G  +   +  I
Sbjct: 168 FLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRI 209


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 270/814 (33%), Positives = 421/814 (51%), Gaps = 52/814 (6%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYI-SKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           ++ C ++   K  H  I       +  Y+ S +V    + G+ ES      A D + K  
Sbjct: 36  VRECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLES------AIDVFHKIA 89

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
             S  + ++  LI  Y   G    AI+L+  +   GI  D   F  VL+AC+       G
Sbjct: 90  HKS--IVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAG 147

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICACAR 216
             +H   V+ G      V + L++ YG CG + D   +F  +    +VV W ++I A ++
Sbjct: 148 RLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQ 207

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL----GDRVCAYIDELGMKA 272
              P+EA+ +F+ M++ GI P+ VT V V  AC+   +L      G   C  +DE G+ +
Sbjct: 208 NGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTC--LDETGLGS 265

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           + ++  ALV+ Y +CG +D A++ F    +RN V   ++++ + ++G    A+     ML
Sbjct: 266 DVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAML 324

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           L G  P R T+ +A+       DL   R+        G+    +I   ++  Y +C  QE
Sbjct: 325 LEGVVPTRSTLFAALEGCE---DLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQE 381

Query: 393 MACRIFDHMSNKTVVSWN-SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
            A R+F   S +    W+ +L+  +I          V+++   RD  S   + G   +  
Sbjct: 382 DAIRVF---SAREEGEWDAALVTAMIA---------VYAQC--RDRRSTFKLWGAAIERG 427

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLA 510
                           I  DR+  +    AC  L AL   + I+A +  +  +  D+ L 
Sbjct: 428 ----------------ISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLG 471

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            A+V M+ +CG  + A   F  M  RD  +W A + A A  G  E   +LF  ML++G  
Sbjct: 472 NAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFD 531

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
            + + F+ +L+AC+H GLV  G   F +MT  HGV P   HYGCMVDLLGR G L +A  
Sbjct: 532 AERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHG 591

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           ++++MPV P+   W +L+ AC+ + + +   +AAER+ EL    +  +V L NIY++AG+
Sbjct: 592 IVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGR 651

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W + A VR  M + G+RK+PG SSIE+  KVHEF   D SHP+   I + L  +   +  
Sbjct: 652 WEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIER 711

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           AGY      VL DV+E++K+ LL  HSEKLA+AFG++ST +   +RV+KNLR+C DCH+ 
Sbjct: 712 AGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNA 771

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +K +SKV+ REI+VRD  RFH F+ G+CSC D+W
Sbjct: 772 SKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/562 (40%), Positives = 340/562 (60%), Gaps = 36/562 (6%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G ++ A++LF + ++ +  +CNT++  Y R     EA+++   M+  G   D  T    +
Sbjct: 59  GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           +A A+LG +  GR  H  VL+NG      + N +I  Y  CG    AC +FD        
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFD-------- 170

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS-E 466
                                  E   RD ++WN M+     + + E+A +L   M   +
Sbjct: 171 -----------------------ESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAY---IEKNGIHCDMQLATALVDMFARCGDP 523
            ++ D VTMV +  AC  LG L+  K++++Y   ++K  I+CD+ L TALVDM+A+CG  
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSI 267

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A+QVFRRM  R+V  W A IG +AM G+GE A+ LF++M    + PD + F+ +L AC
Sbjct: 268 DLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCAC 327

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SH GLV++G  +F++M +   + P++ HYGC+VDLL RA  + +AL  I++MP++ N V+
Sbjct: 328 SHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVL 387

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           W +LL AC+   + D+A     R+ EL+P+  G +V+LSN+YA   +W +  ++R QMK 
Sbjct: 388 WATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKN 447

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR-DAGYVPDLTNVLL 762
           +GI K PG S IE+NG +H+F +GD SH +   I +M+ EM  R+  D G+VP   NVL 
Sbjct: 448 KGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLF 507

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           D++E+EK++ L  HSEKLA+A GLIST    PIR+VKNLR+C DCHSF K+ SKVY+REI
Sbjct: 508 DIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREI 567

Query: 823 IVRDNNRFHFFRQGSCSCSDFW 844
           + RD +RFH F++GSCSC DFW
Sbjct: 568 VARDRSRFHHFKEGSCSCMDFW 589



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 178/325 (54%), Gaps = 11/325 (3%)

Query: 35  SIGSLK-NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           S+  LK +C ++++ KQ H  +L+  L H P + SK++   A +     L YA+K F   
Sbjct: 13  SVDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLA-LSHSGDLNYARKLFT-- 69

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
                 +   F+ N++IRGY+      EA+SLY  +   G+  D +T+PFVL AC +  A
Sbjct: 70  ---QMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGA 126

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G + H  ++K GF  D+FV N LI FY  CG       VFDE + R+VV+W  +I A
Sbjct: 127 VKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINA 186

Query: 214 CARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAY---IDELG 269
              + L ++A  L  EM + + ++P+ VTMV ++ ACA+L NLE G  + +Y   +D+  
Sbjct: 187 HLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFE 246

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           +  + ++  ALVDMY KCG++D A Q+F   + RN+   N ++      G   +A+++ D
Sbjct: 247 INCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFD 306

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLG 354
           +M      PD VT ++ + A +  G
Sbjct: 307 QMEHDKLMPDDVTFIALLCACSHAG 331



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 7/270 (2%)

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIA--GLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           KQ  A  +  H+ +  + S + LI+   L  +GD+  AR++F++M   D    NTM+ G 
Sbjct: 28  KQAHALLLRTHLLHNPLFS-SKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGY 86

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
            +     EA+ L+  M+   + VD  T   V +AC  LGA+ L +  +  + KNG   D+
Sbjct: 87  ARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDL 146

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR- 566
            +  AL+  +  CG    A  VF     RDV  W   I A   +G  E+A +L +EM + 
Sbjct: 147 FVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKL 206

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQG--WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
             ++PD +  V ++ AC+  G + +G   H +    D   ++  +V    +VD+  + G 
Sbjct: 207 DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGS 266

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +  AL + + M V  N   W +L+     H
Sbjct: 267 IDLALQVFRRMRVR-NVFTWNALIGGLAMH 295


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/703 (33%), Positives = 395/703 (56%), Gaps = 33/703 (4%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           +L + T + +F +G Q+H  ++     + + ++   L  FY  CG +     +FD +  +
Sbjct: 65  LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N   W  +I   A   LP +++ L+ EM+  G + ++ T   V+ AC  L  +E+G RV 
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVH 184

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           + +   G++++  + N+L+ MY K G + TA+ +F    +R+L   NT++S Y +   + 
Sbjct: 185 SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSG 244

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI-CNTM 381
            A  + D M   G   D  T+L  +SA A L  +  G++ HGY +RN +  ++    N++
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSL 304

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           I+MY  C      C +                           AR +F  +  +D +SWN
Sbjct: 305 IEMYCNCN-----CMV--------------------------DARRLFERVRWKDTVSWN 333

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           +M+ G  +     E++ LFR M  +    D+VT + V  AC  + AL     I++Y+ K 
Sbjct: 334 SMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK 393

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G   +  + TALVDM+++CG    + +VF  M  + + +W+A +    + G G +A+ + 
Sbjct: 394 GFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISIL 453

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           + M    + PD+ VF  +L+ACSH GLV +G  +F  M   + V P + HY CMVDLLGR
Sbjct: 454 DGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGR 513

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG L EA  +I++M ++P   IW +LL A + H+N+ +A  +A+++ +++P+    ++ L
Sbjct: 514 AGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICL 573

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIYA+  +W +V RVR  ++ +G++K PG S IE++  VH F  GD+SH +  +I + L
Sbjct: 574 SNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKL 633

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
            E+  +L++AGY PD + V  DV+E+ K+ +L  HSE+LA+AF LI+T     IR+ KNL
Sbjct: 634 NELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNL 693

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH+  KL+S++  REII+RD +RFH F +G CSC D+W
Sbjct: 694 RVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 259/540 (47%), Gaps = 49/540 (9%)

Query: 23  QHKAKTTPKDSPSIGSL----KNCKTLNELKQPHCHILKQGLGHKPSYI-SKVVCTCAQM 77
           +H  +  P  S   G+L     N K+  + +Q H H++   +    +Y+ +K+    A  
Sbjct: 49  EHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGC 108

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
           G    ++ A+  FD  +  N      F++N +IRGY+  GL ++++ LY E+  FG   D
Sbjct: 109 GL---MSQAEVIFDGIVLKNS-----FLWNFMIRGYASNGLPMKSLVLYREMLCFGQRAD 160

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
            FT+PFVL AC        G +VH  +V  G + D++V N L+  Y + GD+   R VFD
Sbjct: 161 NFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFD 220

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
            M+ER++ SW ++I   A+      A  +F  M + G+  +  T++ ++SACA L+ ++ 
Sbjct: 221 RMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKE 280

Query: 258 GDRVCAYI--DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           G  +  Y   + +G   N    N+L++MY  C  +  A++LF   + ++ V  N+++  Y
Sbjct: 281 GKVIHGYAVRNSIG-NYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGY 339

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            R G A E+L +   M L G  PD+VT ++ + A  Q+  L  G   H Y+++ G +   
Sbjct: 340 ARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANT 399

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +   ++DMY KCG    + R+FD M +K++VSW++++AG   +G     RE  S + G 
Sbjct: 400 IVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHG---RGREAISILDG- 455

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                                      M +  +  D      + SAC + G +   K I+
Sbjct: 456 ---------------------------MKANSVIPDNGVFTSILSACSHAGLVVEGKEIF 488

Query: 496 AYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMAMEGN 553
             +EK   +   +   + +VD+  R G    A  + R ME +  S  W A + A  +  N
Sbjct: 489 YKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKN 548


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/675 (36%), Positives = 374/675 (55%), Gaps = 67/675 (9%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           RDVF  N +++ Y + G++ D R VFD+MS  + VS+ ++I   +      +A+  F  M
Sbjct: 87  RDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRM 146

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
            EEG +    T V V+ AC++L +++ G ++   I    +  +  + NAL +MY KCGA+
Sbjct: 147 QEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGAL 206

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           D A+ LF    ++N+V  N+++S Y++ G       +  EM   G  PD+VT+ + +SA 
Sbjct: 207 DQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA- 265

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
                                             Y +CG  + AC+ F  +  K  V W 
Sbjct: 266 ----------------------------------YFQCGYIDEACKTFREIKEKDKVCWT 291

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           +++ G  +NG                                 E+A+ LFR ML E ++ 
Sbjct: 292 TMMVGCAQNGKE-------------------------------EDALLLFREMLLENVRP 320

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           D  T+  V S+C  L +L   + ++      G+  D+ +++ALVDM+++CG+   A  VF
Sbjct: 321 DNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVF 380

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           +RM  R+V +W + I   A  G   +A+ L+ EML + +KPD+I FVGVL+AC H GLV 
Sbjct: 381 KRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVE 440

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G   F S++ IHG++P   HY CM++LLGRAG + +A+DLIKSM  EPN +IW +LL+ 
Sbjct: 441 RGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSV 500

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ + +V+    AA  + ELDP  +G +++LSNIYA+ G+W +VA VR  MK   I+K  
Sbjct: 501 CRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFA 560

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
             S IE++ +VH+F + D +H E   I   L  +  +L+++G+ PD   VL DV E+EK 
Sbjct: 561 AYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKF 620

Query: 771 YLLSHHSEKLAMAFGLISTSK-TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
             + +HSEKLA+AF LI       PIR++KN+R+C DCH F K VSK+  R II+RD NR
Sbjct: 621 DSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINR 680

Query: 830 FHFFRQGSCSCSDFW 844
           FH F +G CSC D W
Sbjct: 681 FHHFIEGRCSCKDSW 695



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 217/483 (44%), Gaps = 72/483 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN++I G+S  G   +A+  +V +   G     +T   VL+AC++      G Q+HG IV
Sbjct: 123 YNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIV 182

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
                  VFV N L N Y +CG +   R +FD M  +NVVSW S+I    +   P+    
Sbjct: 183 ATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTK 242

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF EM   G+ P+ VT+  ++SA                                   Y 
Sbjct: 243 LFCEMQSSGLMPDQVTISNILSA-----------------------------------YF 267

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           +CG +D A + F E K+++ V   T+M    + G   +AL +  EMLL   RPD  T+ S
Sbjct: 268 QCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISS 327

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            VS+ A+L  L  G+  HG  +  G++    + + ++DMY KCG+   A  +F  M  + 
Sbjct: 328 VVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRN 387

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V+SWNS+I G  +N              G+D                  EA+ L+  ML 
Sbjct: 388 VISWNSMILGYAQN--------------GKD-----------------LEALALYEEMLH 416

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           E +K D +T VGV SAC + G ++  + + Y+  + +G++      + ++++  R G   
Sbjct: 417 ENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMD 476

Query: 525 RAMQVFRRME-KRDVSAWTAAIGAMAME---GNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           +A+ + + M  + +   W+  +    +     NGE A     E+      P  I+   + 
Sbjct: 477 KAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGP-YIMLSNIY 535

Query: 581 TAC 583
            AC
Sbjct: 536 AAC 538



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 186/414 (44%), Gaps = 58/414 (14%)

Query: 32  DSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQK 88
           D   +  L  C  L ++K   Q H  I+   LG      + +    A+ G   +L  A+ 
Sbjct: 155 DYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCG---ALDQARW 211

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC 148
            FD  +  N  S     +NS+I GY   G       L+ E+   G++PD+ T   +L+A 
Sbjct: 212 LFDRMVNKNVVS-----WNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA- 265

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
                                             Y +CG I +  + F E+ E++ V WT
Sbjct: 266 ----------------------------------YFQCGYIDEACKTFREIKEKDKVCWT 291

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           +++  CA+    ++A+ LF EM+ E ++P++ T+  V+S+CA+L +L  G  V       
Sbjct: 292 TMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G+  + L+ +ALVDMY KCG    A  +F     RN++  N+++  Y + G   EALA+ 
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR----NGLEGWDSICNTMIDM 384
           +EML    +PD +T +  +SA    G +  G+   GY       +G+       + MI++
Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQ---GYFYSISKIHGMNPTFDHYSCMINL 468

Query: 385 YMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMP 433
             + G  + A  +   M+     + W++L++    N DV     +AR +F   P
Sbjct: 469 LGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDP 522



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 45/182 (24%)

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE---------- 555
           D  L   L+ ++A+ G+   A  +F +M +RDV +W A + A +  GN E          
Sbjct: 57  DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMS 116

Query: 556 ---------------------QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
                                QA+E F  M  +G +      V VL ACS    + +G  
Sbjct: 117 VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRG-- 174

Query: 595 LFRSMTDIHG------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
                  IHG      +   +  +  + ++  + G L +A  L   M V  N V W S++
Sbjct: 175 -----KQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRM-VNKNVVSWNSMI 228

Query: 649 AA 650
           + 
Sbjct: 229 SG 230


>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/510 (44%), Positives = 326/510 (63%), Gaps = 4/510 (0%)

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D  T+   + + A L  +  GR  HG  LR GLEG   +  ++IDMY+KCG    A ++F
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           D M  + + SWN+LIAG +K G++  A ++F  M  R+ +SW  M+ G TQ    E+A+ 
Sbjct: 166 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALG 225

Query: 459 LFRVMLSE--RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           LF  ML +   +K + VT+V V  AC    AL+  + I+ +    G+H +  + TAL  M
Sbjct: 226 LFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGM 285

Query: 517 FARCGDPQRAMQVFRRMEK--RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           +A+C     A   F  + +  +++ AW   I A A  G G +AV +F  MLR G++PD++
Sbjct: 286 YAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAV 345

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+G+L+ CSH GL++ G + F  M  IH V P++ HY C+VDLLGRAG L EA +LI  
Sbjct: 346 TFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQ 405

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP++    +WG+LLAAC+ H+N++IA  AA R+  L+P+ SG +VLLSN+YA AG W  V
Sbjct: 406 MPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEV 465

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
            ++R  +K QG++K PG S IE+NGK H F   D+SHP+   I   L  +  +++ AGY+
Sbjct: 466 KKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYI 525

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           PD + VL D+ E+EK+Y L+ HSEKLA+AFGL++T   + +RV KNLR+C DCH+  K +
Sbjct: 526 PDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFI 585

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SK+Y+REIIVRD NRFH F+ GSCSC D+W
Sbjct: 586 SKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 186/390 (47%), Gaps = 52/390 (13%)

Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           Y  +   G+L D FT PFVL +C   S    G  VHG  +++G + D +V   LI+ Y +
Sbjct: 95  YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVK 154

Query: 186 CGDIVDGRRVFDEM-------------------------------SERNVVSWTSLICAC 214
           CG I D R++FD+M                                 RN+VSWT++I   
Sbjct: 155 CGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGY 214

Query: 215 ARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
            +    ++A+ LF EM+++G  +KPN VT+V V+ ACA+   LE G R+  + + +G+  
Sbjct: 215 TQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHL 274

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNTIMSNYVRLGLAREALAILDE 330
           N+ +  AL  MY KC ++  A+  F       +NL+  NT+++ Y   G   EA++I + 
Sbjct: 275 NSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFEN 334

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMY 385
           ML  G +PD VT +  +S  +  G +  G      M   + +   +E +  +    +D+ 
Sbjct: 335 MLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACV----VDLL 390

Query: 386 MKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVE----SAREVFSEMPGRDHISW 440
            + G+   A  +   M  +   S W +L+A    + ++E    +AR +F   P  D+   
Sbjct: 391 GRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEP--DNSGN 448

Query: 441 NTMLGGLTQE-NMFEEAMELFRVMLSERIK 469
             +L  L  E  M+EE  +L  ++  + +K
Sbjct: 449 YVLLSNLYAEAGMWEEVKKLRALLKYQGMK 478



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 151/363 (41%), Gaps = 72/363 (19%)

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
           G+  ++ T+  V+ +CA L  + +G  V      +G++ +  +  +L+DMY+KCG +  A
Sbjct: 102 GLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDA 161

Query: 294 KQLF------------------------GECKD-------RNLVLCNTIMSNYVRLGLAR 322
           ++LF                        G  +D       RN+V    ++S Y + G A 
Sbjct: 162 RKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAE 221

Query: 323 EALAILDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           +AL + DEML  G   +P+ VT++S + A AQ   L  GR  H +    GL    S+   
Sbjct: 222 QALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTA 281

Query: 381 MIDMYMKCGKQEMACRIFDHMSN--KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           +  MY KC     A   FD ++   K +++WN++I     +G                  
Sbjct: 282 LAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHG------------------ 323

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                           EA+ +F  ML   ++ D VT +G+ S C + G +D    +  + 
Sbjct: 324 -------------CGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG--LNHFN 368

Query: 499 EKNGIHC---DMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNG 554
           +   IH     ++    +VD+  R G    A ++  +M  +   S W A + A     N 
Sbjct: 369 DMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNL 428

Query: 555 EQA 557
           E A
Sbjct: 429 EIA 431



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 8/142 (5%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SL  A+  FD   ++ +    L  +N++I  Y+  G GVEA+S++  +   G+ PD  TF
Sbjct: 291 SLVEARCCFDMIAQNGKN---LIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTF 347

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEM 199
             +L+ C+ S     G+  H   +      +  VE+  C+++  G  G +V+ + +  +M
Sbjct: 348 MGLLSGCSHSGLIDAGLN-HFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQM 406

Query: 200 SERNVVS-WTSLICAC-ARRDL 219
             +   S W +L+ AC + R+L
Sbjct: 407 PMQAGPSVWGALLAACRSHRNL 428


>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
 gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/514 (42%), Positives = 321/514 (62%), Gaps = 27/514 (5%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           ML     P++ T    + A A +G+L  G+  HG V++ G     ++ NT++ MY  C  
Sbjct: 1   MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E                           G +E AR+VF EM   D +SW+ M+GG  + 
Sbjct: 61  GE---------------------------GGIEFARKVFDEMYKSDSVSWSAMIGGYVRV 93

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
               +A+ LFR M  + +  D +TMV V SAC  LGAL+L KW+ +Y+EK  +  +++L+
Sbjct: 94  GRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELS 153

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            AL+DMFA+CGD  +A  +FR M +R++ +WT+ IG +AM G G +AV +F EM+R G+ 
Sbjct: 154 NALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVT 213

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD +VF+G+L+ACSH GLV++G   F SM     + P+I HYGCMVD+L RAGL+ EAL 
Sbjct: 214 PDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALK 273

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
            ++ MP++PN V+W +L+ AC+ H  + +      ++   +P     +VLLSNIYA    
Sbjct: 274 FVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSD 333

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W    R+R  M  +G++K+PGS+ IE++ +++EF +GD+SH +   I  M+ EM   ++ 
Sbjct: 334 WEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKR 393

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           AGY+P  T VLLD+D+++K+  L+ HSEKLA+AF L++T     IR+VKNLR+C DCHS 
Sbjct: 394 AGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSA 453

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +K +SK+Y+REI+VRD NRFH F+ G CSC DFW
Sbjct: 454 SKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 166/308 (53%), Gaps = 14/308 (4%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC----GDIV 190
           LP+KFT+PFVL AC        G  VHG+++K GF  +V V+N L++ Y  C    G I 
Sbjct: 7   LPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIE 66

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
             R+VFDEM + + VSW+++I    R     +A+ LF EM  +G+ P+ +TMV V+SAC 
Sbjct: 67  FARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACT 126

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            L  LELG  V +Y+++  ++ N  + NAL+DM+ KCG VD A  LF   ++RN+V   +
Sbjct: 127 GLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTS 186

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGY 365
           ++      G   EA+A+ +EM+  G  PD V  +  +SA +  G +  G+     M   +
Sbjct: 187 VIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDF 246

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVES 424
            +   +E +      M+DM  + G  + A +    M  +   V W +LI     +G+++ 
Sbjct: 247 SIVPKIEHY----GCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKL 302

Query: 425 AREVFSEM 432
             ++  ++
Sbjct: 303 GEKITRQL 310



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 37/344 (10%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC-- 287
           M+E    PN  T   V+ ACA + NL LG  V   + + G      + N LV MY  C  
Sbjct: 1   MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60

Query: 288 --GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
             G ++ A+++F E    + V  + ++  YVR+G + +A+ +  EM + G  PD +TM+S
Sbjct: 61  GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +SA   LG L  G+    YV +  ++    + N +IDM+ KCG  + A  +F  M  + 
Sbjct: 121 VLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERN 180

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +VSW S+I GL  +G     R V                          EA+ +F  M+ 
Sbjct: 181 IVSWTSVIGGLAMHG-----RGV--------------------------EAVAVFEEMVR 209

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQ 524
             +  D V  +G+ SAC + G +D  K  +  + K+  I   ++    +VDM  R G  +
Sbjct: 210 SGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVK 269

Query: 525 RAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            A++  + M    +   W   I A    G  +   ++  +++R 
Sbjct: 270 EALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRN 313



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 158/337 (46%), Gaps = 46/337 (13%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVV---CTCAQMGTFESLTYAQKAFDY 92
           LK C  +  L   K  H  ++K G G + +  + +V   C C   G    + +A+K FD 
Sbjct: 17  LKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCR--GGEGGIEFARKVFDE 74

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
             K +  S     ++++I GY  +G   +AI+L+ E+   G+ PD+ T   VL+ACT   
Sbjct: 75  MYKSDSVS-----WSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLG 129

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
           A   G  V   + K    ++V + N LI+ + +CGD+     +F  M ERN+VSWTS+I 
Sbjct: 130 ALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIG 189

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             A      EAV +F EMV  G+ P+ V  + ++SAC+    ++ G R   Y D   M+ 
Sbjct: 190 GLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKR---YFD--SMRK 244

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +  +V  +              + +G   D   +LC        R GL +EAL  + EM 
Sbjct: 245 DFSIVPKI--------------EHYGCMVD---MLC--------RAGLVKEALKFVQEMP 279

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           +    P+ V   + ++A    G+L  G      ++RN
Sbjct: 280 ID---PNPVVWRTLINACRAHGELKLGEKITRQLIRN 313


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/759 (33%), Positives = 403/759 (53%), Gaps = 78/759 (10%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA-CARRD 218
           VHG I+  GF     + N LI+ Y +  ++   R++FDE+SE + ++ T+++   CA  D
Sbjct: 36  VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 219 LP--------------------------------KEAVYLFFEMVEEGIKPNSVTMVCVI 246
           +                                   A+ LF +M  EG KP++ T   V+
Sbjct: 96  ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKCGA----VDTAKQLFG 298
           +  A + + E   + C       +K+ A  +    NALV +Y KC +    + +A+++F 
Sbjct: 156 AGLALVADDE---KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212

Query: 299 ECKDRN--------------------------------LVLCNTIMSNYVRLGLAREALA 326
           E  +++                                LV  N ++S YV  G  +EAL 
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           ++  M+  G   D  T  S + A A  G L  G+  H YVLR     +    N+++ +Y 
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-HFDNSLVSLYY 331

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCGK + A  IF+ M  K +VSWN+L++G + +G +  A+ +F EM  ++ +SW  M+ G
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
           L +    EE ++LF  M  E  +       G   +C  LGA    +  +A + K G    
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           +    AL+ M+A+CG  + A QVFR M   D  +W A I A+   G+G +AV+++ EML+
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           +GI+PD I  + VLTACSH GLV+QG   F SM  ++ + P   HY  ++DLL R+G   
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYA 686
           +A  +I+S+P +P   IW +LL+ C+ H N+++   AA+++  L PE  G ++LLSN++A
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHA 631

Query: 687 SAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNC 746
           + G+W  VARVR  M+++G++K    S IE+  +VH F   D SHPE   +   L+++  
Sbjct: 632 ATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGK 691

Query: 747 RLRDAGYVPDLTNVLLDVD-EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
            +R  GYVPD + VL DV+ +  K+ +L+ HSEK+A+AFGL+       IR+ KNLR C 
Sbjct: 692 EMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCG 751

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCH+F + +S V  R+II+RD  RFH FR G CSC +FW
Sbjct: 752 DCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 210/527 (39%), Gaps = 108/527 (20%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT-KSSAFGEGVQVHGA 163
           MYN++I G+S    G  AI+L+ ++   G  PD FTF  VL      +    + VQ H A
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174

Query: 164 IVKMGFDRDVFVENCLINFYGECGD----IVDGRRVFDEMSERNVVSWTS---------- 209
            +K G      V N L++ Y +C      +   R+VFDE+ E++  SWT+          
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234

Query: 210 ----------------------LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                                 +I     R   +EA+ +   MV  GI+ +  T   VI 
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294

Query: 248 ACAKLQNLELGDRVCAYI---DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ACA    L+LG +V AY+   ++     +    N+LV +Y KCG  D A+ +F +   ++
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKD 350

Query: 305 LVLCNTIMSNYVRLGLAREALAILDE-------------------------------MLL 333
           LV  N ++S YV  G   EA  I  E                               M  
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  P       A+ + A LG    G+  H  +L+ G +   S  N +I MY KCG  E 
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++F  M     VSWN+LIA L ++G    A +V+ E                      
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE---------------------- 508

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATA 512
                    ML + I+ DR+T++ V +AC + G +D  +  +  +E    I         
Sbjct: 509 ---------MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR 559

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAV 558
           L+D+  R G    A  V   +  K     W A +    + GN E  +
Sbjct: 560 LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 201/456 (44%), Gaps = 74/456 (16%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY-AQKAFDYYIKDNETSATLFM--- 105
           Q H   LK G G+  S  + +V   ++  +  SL + A+K FD  ++ +E S T  M   
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229

Query: 106 ------------------------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
                                   YN++I GY   G   EA+ +   +   GI  D+FT+
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD---- 197
           P V+ AC  +     G QVH  +++   D     +N L++ Y +CG   + R +F+    
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348

Query: 198 ---------------------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
                                      EM E+N++SW  +I   A     +E + LF  M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
             EG +P        I +CA L     G +  A + ++G  ++    NAL+ MY KCG V
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVV 468

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           + A+Q+F      + V  N +++   + G   EA+ + +EML  G RPDR+T+L+ ++A 
Sbjct: 469 EEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528

Query: 351 AQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK- 404
           +  G +  GR     M   Y +  G + +      +ID+  + GK   A  + + +  K 
Sbjct: 529 SHAGLVDQGRKYFDSMETVYRIPPGADHY----ARLIDLLCRSGKFSDAESVIESLPFKP 584

Query: 405 TVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
           T   W +L++G   +G++E    +A ++F  +P  D
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 53/363 (14%)

Query: 336 PRPDRVTMLSAVSAS-------AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
           P PD V  ++   A+        +   L   R  HG ++  G +    I N +ID+Y K 
Sbjct: 3   PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKS 62

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP--GRDHISWNTMLGG 446
            +   A ++FD +S    ++  ++++G   +GD+  AR VF + P   RD + +N M+ G
Sbjct: 63  SELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI--YAYIEKNGIH 504
            +  N    A+ LF  M  E  K D  T   V +    L A D  + +  +A   K+G  
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAG 181

Query: 505 CDMQLATALVDMFARCGDP----QRAMQVFRRMEKRDVSAWT------------------ 542
               ++ ALV ++++C         A +VF  + ++D  +WT                  
Sbjct: 182 YITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL 241

Query: 543 --------------AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
                         A I      G  ++A+E+   M+  GI+ D   +  V+ AC+  GL
Sbjct: 242 LEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHY-GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           +  G  +   +      S    H+   +V L  + G   EA  + + MP + + V W +L
Sbjct: 302 LQLGKQVHAYVLRREDFS---FHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNAL 357

Query: 648 LAA 650
           L+ 
Sbjct: 358 LSG 360


>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 544

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/509 (44%), Positives = 320/509 (62%), Gaps = 19/509 (3%)

Query: 352 QLGDLLCGRMCHGYV--------------LRNGLEGWDSIC-NTMIDMYMKCGKQEMACR 396
           +LG LLC R  + ++              + +G+   D++  N+MI  Y   G    A R
Sbjct: 39  KLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQR 98

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F+ +   T V+W S++AG  + GDVESAR VF EMP RD +SWN M+ G     +  EA
Sbjct: 99  LFERVLAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEA 158

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + LFR M+ E    +R T+V V SAC   GAL+  KW++ ++EK  +  D  L TALVDM
Sbjct: 159 LCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDM 218

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIV 575
           +A+CG  + A++VF  +  R+   W A I  +AM G   +A+++F +M   G + PD + 
Sbjct: 219 YAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVT 278

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FVGVL ACSH G V+ G   F ++   +GV   + HY CMVDLL R+G L EA  LI  M
Sbjct: 279 FVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEM 338

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P++P+ V+W +LL  C+ H+NV +A      I+E++   SG HVLLSN+YA+ G+W  V 
Sbjct: 339 PMKPDVVVWRALLGGCRLHKNVKMAENV---ISEMEATCSGDHVLLSNLYAAVGRWNGVE 395

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
            VR  M+ +GI K+PG SS+E++G +HEF SGD+SHP  ++I + L E+  R++  GYV 
Sbjct: 396 DVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVT 455

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
           +   V  D++++EK+  L +HSEKLA+AFGLI       IR+VKNLR C DCHSFAKLVS
Sbjct: 456 ETAEVFYDIEDEEKEQALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVS 515

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K+Y REI+VRD  RFH FR G+CSC+DFW
Sbjct: 516 KIYHREIVVRDRARFHHFRGGACSCNDFW 544



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 150/289 (51%), Gaps = 8/289 (2%)

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           GD+   RRVF+EM ER++VSW ++I  C    LP EA+ LF  M+EEG  PN  T+V V+
Sbjct: 122 GDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVL 181

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           SAC     LE G  V  ++++  ++ +  +  ALVDMY KCGAV+ A ++F   + RN  
Sbjct: 182 SACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTC 241

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
             N +++     G + +AL +  +M L+G   PD VT +  + A +  G +  G+  H Y
Sbjct: 242 TWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKE-HFY 300

Query: 366 VL--RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDV 422
            +  + G+E        M+D+  + G  + A ++   M  K  VV W +L+ G   + +V
Sbjct: 301 TIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNV 360

Query: 423 ESAREVFSEMPGR---DHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           + A  V SEM      DH+  + +   + + N  E+     R    E+I
Sbjct: 361 KMAENVISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKI 409



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 140/328 (42%), Gaps = 65/328 (19%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLF----------------GECK------------- 301
           + + +  N+++  Y   G V +A++LF                G C+             
Sbjct: 74  RRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRVFEE 133

Query: 302 --DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
             +R+LV  N ++S  V   L  EAL +   M+  G  P+R T++S +SA    G L  G
Sbjct: 134 MPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETG 193

Query: 360 RMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           +  H +V +  L  WD    T ++DMY KCG  E+A  +F  +  +   +WN++I GL  
Sbjct: 194 KWVHVFVEKKRLR-WDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAM 252

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           NG    A ++F +M                               L+  +  D VT VGV
Sbjct: 253 NGYSAKALDMFRQME------------------------------LNGTVAPDEVTFVGV 282

Query: 479 ASACGYLGALDLAK-WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KR 536
             AC + G +D  K   Y   +K G+   ++    +VD+ AR G  Q A ++   M  K 
Sbjct: 283 LLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKP 342

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEM 564
           DV  W A +G   +  N + A  + +EM
Sbjct: 343 DVVVWRALLGGCRLHKNVKMAENVISEM 370



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 14/249 (5%)

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
           + ++ L   P   + +V    + G  ES   A++ F+   + +     L  +N++I G  
Sbjct: 99  LFERVLAPTPVTWTSMVAGFCRAGDVES---ARRVFEEMPERD-----LVSWNAMISG-- 148

Query: 115 CIG--LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD 172
           C+G  L VEA+ L+  +   G +P++ T   VL+ACT + A   G  VH  + K     D
Sbjct: 149 CVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWD 208

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
            F+   L++ Y +CG +     VF  +  RN  +W ++I   A      +A+ +F +M  
Sbjct: 209 EFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMEL 268

Query: 233 EG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALMVNALVDMYMKCGAV 290
            G + P+ VT V V+ AC+    ++ G      I +  G++        +VD+  + G +
Sbjct: 269 NGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHL 328

Query: 291 DTAKQLFGE 299
             A +L  E
Sbjct: 329 QEAHKLITE 337


>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 658

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/599 (40%), Positives = 355/599 (59%), Gaps = 10/599 (1%)

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV--DTAKQLFGECKDRNLVLCNTI 311
           NL    ++  ++   G+  +  ++  L+    K G       +++    + RN  L   +
Sbjct: 62  NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAV 121

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +  Y   G   EA+A+   M      P   T  + + A   +GDL  GR  H    R  L
Sbjct: 122 IRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFR--L 179

Query: 372 EGW--DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            G+    + NTMIDMY+KCG    A ++FD M  + V+SW  LIA   + G++ESA ++F
Sbjct: 180 RGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLF 239

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
             +P +D ++W  M+ G  Q    +EA+E F  M    I+ D VT+ G  SAC  LGA  
Sbjct: 240 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 299

Query: 490 LAKWIYAYIEKNGIHCD--MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            A       +K+G      + + +AL+DM+++CG+ + A+ VF  M  ++V ++++ I  
Sbjct: 300 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILG 359

Query: 548 MAMEGNGEQAVELFNEMLRQ-GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
           +A  G  ++A++LF+ M+ Q  IKP+++ FVG LTACSH GLV+QG  +F SM    GV 
Sbjct: 360 LATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVE 419

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           P   HY CMVDLLGRAG L EAL+LIK+M VEP+  +WG+LL AC+ H N DIA  AAE 
Sbjct: 420 PTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEH 479

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS-SIEVNGKVHEFT 725
           + EL+P+  G ++LLSN+Y+SAG W  V  VR  +KE+G++K P  S  ++ NG++H+F 
Sbjct: 480 LFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 539

Query: 726 SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
            G+ +HP    I   L E+  RL   GY PDL++V  DV +  K+ +L  H+EKLA+AF 
Sbjct: 540 PGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFS 599

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L++T++   I+++KNLR+C DCH F +L S+V  R II+RDN RFH FR G+CSC DFW
Sbjct: 600 LLTTNRDYTIKIMKNLRMCQDCHMFMRLASEVTGRVIIMRDNMRFHHFRSGACSCGDFW 658



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 195/405 (48%), Gaps = 41/405 (10%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           S  I  L +C  LN++KQ H H+L++GL      ++K++ T  ++G      Y ++  + 
Sbjct: 51  SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYPRRVIEP 109

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
               N      F++ ++IRGY+  G   EAI++Y  +    I P  FTF  +L AC    
Sbjct: 110 VQFRNP-----FLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMG 164

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G Q H    ++     V+V N +I+ Y +CG IV  R+VFDEM ER+V+SWT LI 
Sbjct: 165 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIA 224

Query: 213 ACAR----------------RDL---------------PKEAVYLFFEMVEEGIKPNSVT 241
           A AR                +D+               P+EA+  F  M + GI+ + VT
Sbjct: 225 AYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 284

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMV--NALVDMYMKCGAVDTAKQLFGE 299
           +   ISACA+L   +  DR      + G   +  +V  +AL+DMY KCG V+ A  +F  
Sbjct: 285 VAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVS 344

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLC 358
             ++N+   ++++      G A+EAL +   M+     +P+ VT + A++A +  G +  
Sbjct: 345 MNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQ 404

Query: 359 GRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           GR     + +  G+E        M+D+  + G+ + A  +   MS
Sbjct: 405 GRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMS 449


>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/576 (40%), Positives = 347/576 (60%), Gaps = 1/576 (0%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G   +  MV  L+    KC A+D A ++F    + N+ L   ++  +V  G   +A+ + 
Sbjct: 76  GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLY 135

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             ML     PD   M S + A      L  GR  H   L+ GL     +   ++++Y KC
Sbjct: 136 SRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKC 195

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G+   A R+F+ M    V S   +I+     G VE A  VFS +  +D + W  M+ G  
Sbjct: 196 GELGDARRVFEEMPEDVVAS-TVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFV 254

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           +      A+E FR M  E ++ +  T+V V SAC  LGAL++ +W+++Y+ K  I  ++ 
Sbjct: 255 RNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLF 314

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +  AL++M++RCG    A  VF  M+ RDV  +   I  ++M G   QA+ELF  M+ + 
Sbjct: 315 VGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRR 374

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           ++P ++ FVGVL ACSHGGLV+ G+ +F SMT  +GV PQI HYGCMVDLLGR G L EA
Sbjct: 375 LRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEA 434

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
            DLI++M + P+ ++ G+LL+AC+ H+N+++    A+ + +     SG +VLLS++YAS+
Sbjct: 435 YDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASS 494

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
           GKW   A+VR +MKE G++K PG SSIEVN ++HEF  GD  HP    I   L E+N  L
Sbjct: 495 GKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLL 554

Query: 749 RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
           R  GY P+   VL D+++ EK++ L+ HSE+LA+ +GLIST     IRV+KNLR+C DCH
Sbjct: 555 RLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCH 614

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S  KL++K+  R+++VRD NRFH+F  G+CSC D+W
Sbjct: 615 SAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 202/418 (48%), Gaps = 40/418 (9%)

Query: 9   PLVLATPTVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHCHILKQGLGHKPSYI 67
           P    +P     +N +       D   I SL +  K +N++   H  +++ G    P  +
Sbjct: 25  PFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMV 84

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
            +++ +C++     ++ YA + F Y    N     +++Y +LI G+   G   +AI LY 
Sbjct: 85  FELLRSCSKC---HAIDYASRIFQYTHNPN-----VYLYTALIDGFVSSGNYFDAIQLYS 136

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +    ILPD +    +L AC    A  EG +VH   +K+G   +  V   ++  YG+CG
Sbjct: 137 RMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCG 196

Query: 188 DIVDGRRVFDEMSE------------------------------RNVVSWTSLICACARR 217
           ++ D RRVF+EM E                              ++ V WT++I    R 
Sbjct: 197 ELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRN 256

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           +    A+  F  M  E ++PN  T+VCV+SAC++L  LE+G  V +Y+ +  ++ N  + 
Sbjct: 257 EEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVG 316

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           NAL++MY +CG++D A+ +F E KDR+++  NT++S     G +R+A+ +   M+    R
Sbjct: 317 NALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLR 376

Query: 338 PDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           P  VT +  ++A +  G +  G ++ H      G+E        M+D+  + G+ E A
Sbjct: 377 PTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEA 434



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 190/423 (44%), Gaps = 64/423 (15%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +++   +S    + + +H  +++ G  +D F+   L+    +C  I    R+F      N
Sbjct: 52  IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 111

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V  +T+LI          +A+ L+  M+ + I P++  M  ++ AC     L  G  V +
Sbjct: 112 VYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHS 171

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              +LG+ +N L+   ++++Y KCG +  A+++F E  + ++V    ++S+Y   GL  E
Sbjct: 172 RALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEE 230

Query: 324 ALAILDE-------------------------------MLLHGPRPDRVTMLSAVSASAQ 352
           A A+                                  M     RP+  T++  +SA +Q
Sbjct: 231 AGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQ 290

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           LG L  GR  H Y+ +  +E    + N +I+MY +CG  + A  +FD M ++ V+++N++
Sbjct: 291 LGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTM 350

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I+GL  NG    A                               +ELFRVM+  R++   
Sbjct: 351 ISGLSMNGKSRQA-------------------------------IELFRVMIGRRLRPTN 379

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           VT VGV +AC + G +D    I+  + ++ G+   ++    +VD+  R G  + A  + R
Sbjct: 380 VTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIR 439

Query: 532 RME 534
            M+
Sbjct: 440 TMK 442



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 5/179 (2%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+A + +NG   D  +   L+   ++C     A ++F+     +V  +TA I      GN
Sbjct: 68  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
              A++L++ ML   I PD+ +   +L AC     + +G  +      +   S ++V   
Sbjct: 128 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 187

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN-VDIAAYAAERITELD 671
            M +L G+ G LG+A  + + M   P DV+  +++ +    Q  V+ A     R+   D
Sbjct: 188 IM-ELYGKCGELGDARRVFEEM---PEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKD 242



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 93/233 (39%), Gaps = 63/233 (27%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           S+  AQ  FD  +KD +    +  YN++I G S  G   +AI L+  + G  + P   TF
Sbjct: 328 SIDEAQTVFDE-MKDRD----VITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTF 382

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFD------RDVFVE------NCLINFYGECGDI 189
             VLNAC+           HG +V  GF       RD  VE       C+++  G  G +
Sbjct: 383 VGVLNACS-----------HGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRL 431

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                                          +EA  L   M    + P+ + +  ++SAC
Sbjct: 432 -------------------------------EEAYDLIRTM---KMTPDHIMLGTLLSAC 457

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
              +NLELG++V   +++ G   +   V  L  +Y   G    A Q+  + K+
Sbjct: 458 KMHKNLELGEQVAKVLEDRGQADSGTYV-LLSHVYASSGKWKEAAQVRAKMKE 509


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/749 (34%), Positives = 405/749 (54%), Gaps = 48/749 (6%)

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F++N +IRG++  GL   A++ Y  +   G  PD+FTFP V+  C +     EG   HG 
Sbjct: 73  FLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGM 132

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K+G + DV+  N L+ FY + G + D  RVFD M  R++V+W +++       L   A
Sbjct: 133 VIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLA 192

Query: 224 VYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           +  F EM +   ++ +SV ++  ++AC    +   G  +  Y+   G++ +  +  +L+D
Sbjct: 193 LACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLD 252

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG V  A+ +F     R +V  N ++  Y       EA     +M   G + + VT
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            ++ ++A AQ    L GR  HGYV+R        +   +++MY K GK E + +IF  ++
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           NKT+VSWN++IA  +                                + M+ EA+ LF  
Sbjct: 373 NKTLVSWNNMIAAYM-------------------------------YKEMYTEAITLFLE 401

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           +L++ +  D  TM  V  A   LG+L   + I++YI   G   +  +  A++ M+AR GD
Sbjct: 402 LLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGD 461

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              + ++F +M  +DV +W   I   A+ G G+ A+E+F+EM   G++P+   FV VLTA
Sbjct: 462 VVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTA 521

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS  GLV++GW  F  M   +G+ PQI HYGCM DLLGR G L E L  I+SMP++P   
Sbjct: 522 CSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSR 581

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WGSLL A +   ++DIA YAAERI +L+ + +G +++LS++YA AG+W +V RVRL MK
Sbjct: 582 VWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMK 641

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHP------EMNNISSMLREMNCRLRDAGY-VP 755
           E+G+R+    S +E++     F +GD SH       E++NI S   E     R+  Y VP
Sbjct: 642 EKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEETDDTRNQSYPVP 701

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVS 815
             T             + + HS +LA+ FGLIS+    PI V KN+R+C  CH   KL+S
Sbjct: 702 VATRT---------TTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLIS 752

Query: 816 KVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +   R I+V D+  +H F  GSC C D+W
Sbjct: 753 RYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 236/493 (47%), Gaps = 45/493 (9%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD-YYIKDNETSATL 103
           L+E +  H  ++K GL H     + +V   A++G  E    A++ FD   ++D      +
Sbjct: 123 LDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVED---AERVFDGMPVRD------I 173

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
             +N+++ GY   GLG  A++ + E+     +  D       L AC    +  +G ++HG
Sbjct: 174 VTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHG 233

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ G ++D+ V   L++ Y +CG++   R VF  M  R VV+W  +I   A  + P E
Sbjct: 234 YVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A   F +M  EG++   VT + +++ACA+ ++   G  V  Y+       + ++  AL++
Sbjct: 294 AFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLE 353

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K G V++++++FG+  ++ LV  N +++ Y+   +  EA+ +  E+L     PD  T
Sbjct: 354 MYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFT 413

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M + V A   LG L   R  H Y++  G      I N ++ MY + G    +  IFD M 
Sbjct: 414 MSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMV 473

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           +K V+SWN++I G   +G  ++A E+F EM       +N +                   
Sbjct: 474 SKDVISWNTMIMGYAIHGQGKTALEMFDEM------KYNGL------------------- 508

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIY--AYIEKNGIHCDMQLATALVDMFARC 520
                 + +  T V V +AC   G +D   W++    +++ G+   ++    + D+  R 
Sbjct: 509 ------QPNESTFVSVLTACSVSGLVD-EGWMHFNLMLQEYGMIPQIEHYGCMTDLLGRE 561

Query: 521 GDPQRAMQVFRRM 533
           GD +  +Q    M
Sbjct: 562 GDLREVLQFIESM 574



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 42/368 (11%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +D A +     +  +  L N ++  +   GL   ALA    ML  G RPDR T    V
Sbjct: 55  GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
              A+LG L  GR  HG V++ GLE     CN+++  Y K G  E A R+FD M  + +V
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           +WN+++ G + NG    A   F EM                      +A+E         
Sbjct: 175 TWNTMVDGYVSNGLGSLALACFQEM---------------------HDALE--------- 204

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           ++ D V ++   +AC    +    K I+ Y+ ++G+  D+++ T+L+DM+ +CG+   A 
Sbjct: 205 VQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYAR 264

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG- 586
            VF  M  R V  W   IG  A+    ++A + F +M  +G++ + +  + +L AC+   
Sbjct: 265 SVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTE 324

Query: 587 ----GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
               G    G+ + R         P +V    ++++ G+ G + E+ + I         V
Sbjct: 325 SSLYGRSVHGYVVRRQFL------PHVVLETALLEMYGKVGKV-ESSEKIFGKIANKTLV 377

Query: 643 IWGSLLAA 650
            W +++AA
Sbjct: 378 SWNNMIAA 385



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 3/254 (1%)

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           S  SL+  L   G ++ A E  + + G D    N M+ G     +   A+  +R ML + 
Sbjct: 43  SSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDG 102

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
            + DR T   V   C  LG LD  +  +  + K G+  D+    +LV  +A+ G  + A 
Sbjct: 103 ARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAE 162

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ-GIKPDSIVFVGVLTACSHG 586
           +VF  M  RD+  W   +      G G  A+  F EM     ++ DS+  +  L AC   
Sbjct: 163 RVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLE 222

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
               QG  +   +   HG+   I     ++D+  + G +  A  +  +MP+    V W  
Sbjct: 223 VSSMQGKEIHGYVIR-HGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR-TVVTWNC 280

Query: 647 LLAACQKHQNVDIA 660
           ++     ++  D A
Sbjct: 281 MIGGYALNERPDEA 294


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/731 (34%), Positives = 388/731 (53%), Gaps = 36/731 (4%)

Query: 119 GVEAI---SLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF 174
           GVE I   S    L G G  L D  T   ++    ++    +G Q+H  +++ G   + F
Sbjct: 52  GVEEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTF 111

Query: 175 VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           + N  +N Y +CG++    ++FD+MS+RN+VSWTS+I   A     +EA+  F +M  EG
Sbjct: 112 LSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEG 171

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
                  +  V+ AC  L  ++ G +V   + + G      + + L DMY KCG +  A 
Sbjct: 172 EIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDAC 231

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           + F E   ++ VL  +++  +V+ G  ++AL    +M+      D+  + S +SA + L 
Sbjct: 232 KAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALK 291

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD-HMSNKTVVSWNSLI 413
               G+  H  +L+ G E    I N + DMY K G    A  +F  H    ++VS  ++I
Sbjct: 292 ASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAII 351

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            G ++   +E A   F ++  R                                I+ +  
Sbjct: 352 DGYVEMDQIEKALSTFVDLRRRG-------------------------------IEPNEF 380

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T   +  AC     L+    ++  + K     D  +++ LVDM+ +CG    ++Q+F  +
Sbjct: 381 TFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEI 440

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
           E  D  AW   +G  +  G G  A+E FN M+ +G+KP+++ FV +L  CSH G+V  G 
Sbjct: 441 ENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGL 500

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
           + F SM  I+GV P+  HY C++DLLGRAG L EA D I +MP EPN   W S L AC+ 
Sbjct: 501 NYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKI 560

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H +++ A +AA+++ +L+PE SG HVLLSNIYA   +W +V  +R  +K+  + KLPG S
Sbjct: 561 HGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYS 620

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            +++  K H F   D SHP+   I   L  +  +++  GYVP   +VL+D+D+  K+ LL
Sbjct: 621 WVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLL 680

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
            +HSE++A+AF L++    MPI V KNLR+C DCHS  K +SKV +R IIVRD +RFH F
Sbjct: 681 HYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHF 740

Query: 834 RQGSCSCSDFW 844
             GSCSC D+W
Sbjct: 741 SNGSCSCGDYW 751



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 243/537 (45%), Gaps = 42/537 (7%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
           HK   T   +  I +    K LN+ KQ H  +++ G        +  +   ++ G    L
Sbjct: 70  HKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCG---EL 126

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
            Y  K FD   + N  S T     S+I G++      EA+S + ++   G +  +F    
Sbjct: 127 DYTIKLFDKMSQRNMVSWT-----SIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSS 181

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL ACT   A   G QVH  +VK GF  ++FV + L + Y +CG++ D  + F+EM  ++
Sbjct: 182 VLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKD 241

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
            V WTS+I    +    K+A+  + +MV + +  +   +   +SAC+ L+    G  + A
Sbjct: 242 AVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHA 301

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD-RNLVLCNTIMSNYVRLGLAR 322
            I +LG +    + NAL DMY K G + +A  +F    D  ++V    I+  YV +    
Sbjct: 302 TILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIE 361

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           +AL+   ++   G  P+  T  S + A A    L  G   HG V++   +    + +T++
Sbjct: 362 KALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLV 421

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY KCG  + + ++FD + N   ++WN+L+                             
Sbjct: 422 DMYGKCGLFDHSIQLFDEIENPDEIAWNTLV----------------------------- 452

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-N 501
             G  +Q  +   A+E F  M+   +K + VT V +   C + G ++     ++ +EK  
Sbjct: 453 --GVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIY 510

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           G+    +  + ++D+  R G  + A      M  + +V  W + +GA  + G+ E+A
Sbjct: 511 GVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERA 567



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 13/203 (6%)

Query: 17  VTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCT 73
           ++T  +  +    P +      +K C    +L+   Q H  ++K      P   S +V  
Sbjct: 364 LSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDM 423

Query: 74  CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
             + G F+   ++ + FD     +E +     +N+L+  +S  GLG  AI  +  +   G
Sbjct: 424 YGKCGLFD---HSIQLFDEIENPDEIA-----WNTLVGVFSQHGLGRNAIETFNGMIHRG 475

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM-GFDRDVFVENCLINFYGECGDIVDG 192
           + P+  TF  +L  C+ +    +G+    ++ K+ G        +C+I+  G  G + + 
Sbjct: 476 LKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEA 535

Query: 193 RRVFDEMS-ERNVVSWTSLICAC 214
               + M  E NV  W S + AC
Sbjct: 536 EDFINNMPFEPNVFGWCSFLGAC 558


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/740 (34%), Positives = 398/740 (53%), Gaps = 34/740 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F +N ++ GY   GL  EA+ LY  +   G+ PD +TFP VL +C     +  G +VH 
Sbjct: 160 VFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHA 219

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ GF  +V V N L+  Y +CGD+V  R+VFD M+  + +SW ++I           
Sbjct: 220 HVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNA 279

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + LF  M+++ ++PN +T+  V  A   L ++     +     + G   +    N+L+ 
Sbjct: 280 GLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQ 339

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY   G +  A+ +F     R+ +    ++S Y + G   +AL +   M ++   PD +T
Sbjct: 340 MYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDIT 399

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + SA++A A LG L  G   H      G   +  + N +++MY K  +            
Sbjct: 400 IASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKR------------ 447

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                              ++ A EVF  MP +D +SW++M+ G    +   EA+  FR 
Sbjct: 448 -------------------IDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRH 488

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML++ +K + VT +   +AC   GAL   K I+A++ + GI  +  L  AL+D++ +CG 
Sbjct: 489 MLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQ 547

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              A   F     +DV +W   I      GNGE A+  FN+M++ G  PD + FV +L A
Sbjct: 548 TGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCA 607

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS GG+V++GW LF SMTD + + P + HY CMVDLL R G L EA + I  MP+ P+  
Sbjct: 608 CSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAA 667

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WG+LL  C+ H++V++   AA+ + EL+P  +G HVLL ++YA AG W  +ARVR  M+
Sbjct: 668 VWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMR 727

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
           E+G+    G S +EV G VH F + DESHP++  I+++L  +  R++ +G  P  ++   
Sbjct: 728 EKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVESHS-- 785

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
             D+  K  +   HSE+LA+AFGLI+T+    I V KN   C  CH   K++S +  R+I
Sbjct: 786 PEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDI 845

Query: 823 IVRDNNRFHFFRQGSCSCSD 842
           IVRD+ + H F+ GSCSC D
Sbjct: 846 IVRDSKQVHHFKDGSCSCGD 865



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 200/437 (45%), Gaps = 34/437 (7%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+    V +   C   + +E G R CA+ D+        + NA++ M ++ G    A ++
Sbjct: 92  PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 151

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F +  +R++   N ++  Y + GL  EAL +   M+  G RPD  T    + +   + D 
Sbjct: 152 FAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDW 211

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             GR  H +VLR G      + N ++ MY KCG    A ++FD M+    +SWN++IAG 
Sbjct: 212 RMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGH 271

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            +NG+  +                                +ELF  ML + ++ + +T+ 
Sbjct: 272 FENGECNA-------------------------------GLELFLTMLQDEVQPNLMTIT 300

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V  A G L  +  AK ++    K G   D+    +L+ M+A  G   +A  VF RM+ R
Sbjct: 301 SVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTR 360

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D  +WTA I      G  ++A+E++  M    + PD I     L AC+  G ++ G  L 
Sbjct: 361 DAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKL- 419

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA-CQKHQ 655
             + +  G    +V    ++++  ++  + +A+++ K MP E + V W S++A  C  H+
Sbjct: 420 HELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMP-EKDVVSWSSMIAGFCFNHR 478

Query: 656 NVDIAAYAAERITELDP 672
           N +   Y    + ++ P
Sbjct: 479 NFEALYYFRHMLADVKP 495



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 222/488 (45%), Gaps = 42/488 (8%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N +++     G+     RVF +M ER+V SW  ++    +  L +EA+ L+  M+  G++
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR 192

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+  T  CV+ +C  + +  +G  V A++   G      ++NAL+ MY KCG V  A+++
Sbjct: 193 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKV 252

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F      + +  N +++ +   G     L +   ML    +P+ +T+ S   AS  L D+
Sbjct: 253 FDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDI 312

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
              +  HG  ++ G     + CN++I MY   G    A  +F  M  +  +SW ++I+G 
Sbjct: 313 TFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGY 372

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            KNG            P                    ++A+E++ +M    +  D +T+ 
Sbjct: 373 EKNG-----------FP--------------------DKALEVYALMEVNNVSPDDITIA 401

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
              +AC  LG+LD+   ++   E  G    + +  AL++M+A+     +A++VF+ M ++
Sbjct: 402 SALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEK 461

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG---- 592
           DV +W++ I          +A+  F  ML   +KP+S+ F+  L AC+  G +  G    
Sbjct: 462 DVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIH 520

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
            H+ R      G  P       ++DL  + G  G A     +   + + V W  ++A   
Sbjct: 521 AHVLRCGIAYEGYLPN-----ALIDLYVKCGQTGYAWAQFCAHGAK-DVVSWNIMIAGFV 574

Query: 653 KHQNVDIA 660
            H N + A
Sbjct: 575 AHGNGETA 582


>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/588 (40%), Positives = 349/588 (59%), Gaps = 45/588 (7%)

Query: 263 AYIDELGMKANALMVNALVDMYMKCG-----AVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           A I   G   ++ +  +LV  Y         + +++ ++F   +  N+ L N ++   + 
Sbjct: 76  ALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIE 135

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
                +A+ +  EM++   RP++ T  + + A +  G +  G   H +++++GL G   I
Sbjct: 136 NNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHI 195

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            ++ I MY   G+   A RI D                  K G+V++       MP R  
Sbjct: 196 LSSAIRMYASFGRLVEARRILDD-----------------KGGEVDAVC-----MPDR-- 231

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                       +  F EA+E+F  M  E+I+  +  +  V SAC  LGALD  +WI+ Y
Sbjct: 232 ------------KGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 279

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            ++N I  D  L T+LVDM+A+CG    A +VF +M  ++VS+W A IG +AM G  E A
Sbjct: 280 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDA 339

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           ++LF++M    I P+ I FVGVL AC+HGGLV +G  +F SM   +GV PQI HYGC+VD
Sbjct: 340 IDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVD 396

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGRAGLL EA  ++ S+P EP   +WG+LL AC+KH NV++     + + EL+P+ SG 
Sbjct: 397 LLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGR 456

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV-NGKVHEFTSGDESHPEMNN 736
           + LLSNIYA AG+W  V  VR  MKE+GI+  PG+S I++  G+VH+F  GD SHP++ +
Sbjct: 457 YTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKD 516

Query: 737 ISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIR 796
           I  ML ++  RL+  GY PD + VL D+DE+EK+  +  HSEKLA+ FGLI+TS    IR
Sbjct: 517 IYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIR 576

Query: 797 VVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +VKNLR+C DCHS  KL+S+VY+REIIVRD  R+H FR G+CSC DFW
Sbjct: 577 IVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 222/471 (47%), Gaps = 31/471 (6%)

Query: 20  LTNQHKAKTTPKDSPSIGSLKNCK---TLNELKQPHCHILKQGLGH-KPSYIS-KVVCTC 74
           + N H  +T+     +I  L N +   +L+ LKQ H  IL+ G  H + SYI+  +V + 
Sbjct: 40  IPNGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTG--HLQDSYIAGSLVKSY 97

Query: 75  AQMGTFESLTYAQ--KAFDYYIKDNETSATLFMYNSLIRGYSCI--GLGVEAISLYVELA 130
           A + T   L++    + FD+  K N     +F++N +I+   CI      +AI LY E+ 
Sbjct: 98  ANVSTNRYLSFESSLRVFDFVRKPN-----VFLWNCMIK--VCIENNEPFKAILLYYEMM 150

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
                P+K+T+P VL AC+ +    EGVQVH  +VK G   D  + +  I  Y   G +V
Sbjct: 151 VAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLV 210

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           + RR+ D+            +C   R+    EA+ +F +M +E I+P    +  V+SACA
Sbjct: 211 EARRILDDKGGE-----VDAVCMPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACA 265

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            L  L+ G  +  Y     ++ + ++  +LVDMY KCG +D A ++F +  ++ +   N 
Sbjct: 266 NLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNA 325

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN- 369
           ++      G A +A+ +  +M ++   P+ +T +  ++A A  G +  G      + +  
Sbjct: 326 MIGGLAMHGRAEDAIDLFSKMDIN---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEY 382

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM-SNKTVVSWNSLIAGLIKNGDVESAREV 428
           G+E        ++D+  + G    A ++   + +  T   W +L+    K+G+VE    V
Sbjct: 383 GVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERV 442

Query: 429 ---FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
                E+  ++   +  +     +   +EE  E+ ++M    IK    T +
Sbjct: 443 GKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSI 493


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/610 (36%), Positives = 358/610 (58%), Gaps = 32/610 (5%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           ++P       +++ C  L+ L+ G  + A+I     + + +++N +++MY KCG+++ A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            LF +   +++V    ++S Y + G A EALA+  +ML  G +P+  T+ S + AS    
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
               GR  H + L+ G +    + ++++DMY +      A  IF+ ++ K VV       
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV------- 273

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                                   SWN ++ G  ++   E  M LF  ML +  +    T
Sbjct: 274 ------------------------SWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFT 309

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              V +AC   G+L+  KW++A++ K+G      +   L+DM+A+ G  + A +VFRR+ 
Sbjct: 310 YSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLV 369

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           K+D+ +W + I   A  G G +A++LF +ML+  ++P+ I F+ VLTACSH GL+++G +
Sbjct: 370 KQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQY 429

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F  M   H +  Q+ H+  +VDLLGRAG L EA   I+ MP++P   +WG+LL +C+ H
Sbjct: 430 YFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMH 488

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +N+D+  YAAE+I ELDP  SG HVLLSNIYASAG+ ++ A+VR  MKE G++K P  S 
Sbjct: 489 KNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSW 548

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           +E+  +VH F + D+SHP    I  M  +++ ++++ GYVPD ++VL  +++Q+++  L 
Sbjct: 549 VEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQ 608

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEKLA+AF ++ T   + IR+ KN+R+C DCHS  K  S+V  REIIVRD NRFH F 
Sbjct: 609 YHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFL 668

Query: 835 QGSCSCSDFW 844
            G CSC D+W
Sbjct: 669 HGMCSCRDYW 678



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 208/433 (48%), Gaps = 39/433 (9%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P++  +  +LN CT      +G  +H  I    F+ D+ + N ++N Y +CG + + + +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FD+M  +++VSWT LI   ++     EA+ LF +M+  G +PN  T+  ++ A     + 
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
             G ++ A+  + G   N  + ++L+DMY +   +  AK +F     +N+V  N +++ +
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            R G     + +  +ML  G  P   T  S  +A A  G L  G+  H +V+++G +   
Sbjct: 283 ARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIA 342

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            I NT+IDMY K G  + A ++F  +  + +VSWNS+I+G  ++G               
Sbjct: 343 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG--------------- 387

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                   LG         EA++LF  ML  +++ + +T + V +AC + G LD  ++ +
Sbjct: 388 --------LGA--------EALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF 431

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN- 553
             ++K+ I   +     +VD+  R G    A +    M  +  +A W A +G+  M  N 
Sbjct: 432 ELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNM 491

Query: 554 ------GEQAVEL 560
                  EQ  EL
Sbjct: 492 DLGVYAAEQIFEL 504



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 204/403 (50%), Gaps = 16/403 (3%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L  C  L +LKQ    H HI           ++ ++   A+ G+ E    AQ  FD    
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEE---AQDLFDKMPT 168

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S T+     LI GYS  G   EA++L+ ++   G  P++FT   +L A     +  
Sbjct: 169 KDMVSWTV-----LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDH 223

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G Q+H   +K G+D +V V + L++ Y     + + + +F+ ++ +NVVSW +LI   A
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHA 283

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           R+   +  + LF +M+ +G +P   T   V +ACA   +LE G  V A++ + G +  A 
Sbjct: 284 RKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAY 343

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + N L+DMY K G++  AK++F     +++V  N+I+S Y + GL  EAL + ++ML   
Sbjct: 344 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 403

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+ +T LS ++A +  G L  G+     + ++ +E   +   T++D+  + G+   A 
Sbjct: 404 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEAN 463

Query: 396 RIFDHMSNK-TVVSWNSLIAG--LIKNGD--VESAREVFSEMP 433
           +  + M  K T   W +L+    + KN D  V +A ++F   P
Sbjct: 464 KFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDP 506


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/717 (33%), Positives = 394/717 (54%), Gaps = 47/717 (6%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +HG   K G  + +   N L+  Y +  ++    ++FDE++ +N  +WT LI   AR   
Sbjct: 54  LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAG 113

Query: 220 PKEAVY-LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             E V+ LF EM  +G  PN  T+  V+  C++  N++ G  + A+I   G+  + ++ N
Sbjct: 114 SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN 173

Query: 279 ALVDMYMKC-------------------------------GAVDTAKQLFGECKDRNLVL 307
           +++D+Y+KC                               G V+ + ++F    ++++V 
Sbjct: 174 SILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVS 233

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            NTI+   ++ G  R AL  L  M+ HG     VT   A+   + L  +  GR  HG VL
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVL 293

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
             GL     I +++++MY KCG+ + A  I   +               ++ G+      
Sbjct: 294 TFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVP-----------LNFLRKGNFG---- 338

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           V  + P    +SW++M+ G      +E+ M+ FR M+ E I VD  T+  + SAC   G 
Sbjct: 339 VTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGI 398

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L+  K I+AYI+K G+  D  + ++L+DM+++ G    A+ +F ++++ +V  WT+ I  
Sbjct: 399 LEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISG 458

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            A+ G G++A+ LF  ML  GI P+ + FVGVL ACSH GL+ +G   FR M D + ++P
Sbjct: 459 CALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINP 518

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
           ++ HY  MV+L GRAG L EA + I    +     +W S L++C+ H+N ++    +E +
Sbjct: 519 EVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEML 578

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
            +  P     ++LLSN+ +S  +W   A VR  M ++G++K PG S +++  ++H FT G
Sbjct: 579 LQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVG 638

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           D SHP+   I S L  +  RL++ GY  D   V+ DV+E++ + L+SHHSEKLA+ F +I
Sbjct: 639 DRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSII 698

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +TS   PIR++KNLR+C DCH+F K  S++ +REIIVRD +RFH F+Q SCSC ++W
Sbjct: 699 NTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 148/632 (23%), Positives = 266/632 (42%), Gaps = 109/632 (17%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQG---LGHKPSYISKVVCTCAQMGTFESLTYAQKA 89
           + SIGS  + + L      H H  K+G   + +  +Y+  +    +      +L +A K 
Sbjct: 42  TTSIGSPPSLRAL------HGHYFKKGSLQILNSANYLLTLYVKSS------NLDHAHKL 89

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAI-SLYVELAGFGILPDKFTFPFVLNAC 148
           FD     N  + T+     LI G++      E + SL+ E+   G  P+++T   VL  C
Sbjct: 90  FDEITHKNTQTWTI-----LISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCC 144

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
           ++ +    G  +H  I++ G   DV +EN +++ Y +C +       F+ M E++VVSW 
Sbjct: 145 SRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWN 204

Query: 209 SLICACAR-----------RDLPKE--------------------AVYLFFEMVEEGIKP 237
            +I A  R           R+ P +                    A+   + MV  G + 
Sbjct: 205 IMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEF 264

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL- 296
           + VT    +   + L  +E+G ++   +   G+ ++  + ++LV+MY KCG +D A  + 
Sbjct: 265 SPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTIL 324

Query: 297 ------------FG-ECKD--RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
                       FG  CK+    +V  ++++S YV  G   + +     M+      D  
Sbjct: 325 KDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR 384

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+ + +SA A  G L  G+  H Y+ + GL     + +++IDMY K G  + A  IF+ +
Sbjct: 385 TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQI 444

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
               VV W S+I+G   +G                                 +EA+ LF 
Sbjct: 445 KEPNVVLWTSMISGCALHGQG-------------------------------KEAISLFE 473

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARC 520
            ML+  I  + VT VGV +AC ++G ++   ++     +   I+ +++  T++V+++ R 
Sbjct: 474 GMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRA 533

Query: 521 GDPQRAMQ-VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           G    A   +F        S W + + +  +  N      + +EML Q    D   ++ +
Sbjct: 534 GHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSV-SEMLLQSAPSDPDAYILL 592

Query: 580 LTACSHGGLVNQGWH---LFRSMTDIHGVSPQ 608
              CS     N  W    + RS+    GV  Q
Sbjct: 593 SNMCSS----NHQWDEAAIVRSLMYQRGVKKQ 620



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 30/236 (12%)

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S + ++  +G     R  HG+  + G     +  N ++ +Y+K    + A ++FD +++K
Sbjct: 37  SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
              +W  LI+G  +     S+  VFS                            LFR M 
Sbjct: 97  NTQTWTILISGFARAAG--SSELVFS----------------------------LFREMQ 126

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           ++    ++ T+  V   C     +   K I+A+I +NG+  D+ L  +++D++ +C + +
Sbjct: 127 ADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFE 186

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
            A   F  M ++DV +W   IGA   EG+ E+++E+F     + +   + +  G++
Sbjct: 187 YAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLI 242


>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 596

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/547 (42%), Positives = 326/547 (59%), Gaps = 9/547 (1%)

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLH------GPRPDRVTMLSAVSASAQLGDLL 357
            + L NT +  + R   AR   ++L  +LL          P+  T        +      
Sbjct: 53  TVFLFNTTIRGFSR---ARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFD 109

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            GR  HG V++N  E    + N++I  Y  CG+   A  +FD  S   VVSWNS+I G I
Sbjct: 110 LGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCI 169

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
           +NG++  A  +FS+M  R+ ISWN M+ G  Q    +EA+ LFR M     + +   +V 
Sbjct: 170 RNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVS 229

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
           V SAC  LGALD   W++ YI K  +  D  L+ AL+DM+A+CG    AMQ F    KRD
Sbjct: 230 VLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRD 289

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           VSA+TAAI  +AM G  E+A++LF +M  +GI PD + ++ VL ACSH G V +G+H F 
Sbjct: 290 VSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFA 349

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           SM+D+HG+ P++ HY CMVDLLGRAGLL EA   + SMP++P++VIWG+LL AC+ + N 
Sbjct: 350 SMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNA 409

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           ++       + E D    G ++LLSNIYA + K  +  +VR  M+ + + ++PG S IEV
Sbjct: 410 EMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEV 469

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
            G VHEF SGD SH +   I  M  E+   ++  GY  +   V+ DV+E+EK+ ++ HHS
Sbjct: 470 AGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEEEEKEAVIGHHS 529

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           EKLA+AFG + T     +R+VKN+R+C DCH   KLVSKV+ R+I +RD   FH F +G 
Sbjct: 530 EKLAVAFGFLYTKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGL 589

Query: 838 CSCSDFW 844
           CSC D+W
Sbjct: 590 CSCKDYW 596



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 226/486 (46%), Gaps = 58/486 (11%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY---YIKDNETSA 101
           + + K+ H  ++  GL H P  +  ++       +F +L       DY    +    T  
Sbjct: 1   MKQFKEAHTQLIINGLTHPPPSLRPII-------SFSALD-PSGDIDYALLLLLRTSTPP 52

Query: 102 TLFMYNSLIRGYSCI---GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           T+F++N+ IRG+S     G  + ++ L+V +    + P+ FTF F+   C+   AF  G 
Sbjct: 53  TVFLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGR 112

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC---- 214
           Q HG ++K  F+ DVFV N +I FY  CG + D R VFDE SE +VVSW S+I  C    
Sbjct: 113 QFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNG 172

Query: 215 -------------ARRDL--------------PKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
                         R D+              PKEA+ LF EM     +PNS  +V V+S
Sbjct: 173 NILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLS 232

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           AC++L  L+ G  V  YI +  ++ ++++  AL+DMY KCG++D A Q F   + R++  
Sbjct: 233 ACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSA 292

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMC 362
               +S     G + EAL + ++M   G  PD V+ ++ + A +  G +  G      M 
Sbjct: 293 YTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMS 352

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGD 421
             + +R  L+ +      M+D+  + G  E A +    M  K   V W +L+      G+
Sbjct: 353 DVHGIRPELDHY----ACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGN 408

Query: 422 VESAREVFSEMPGRD--HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
            E  + V S +   D  H     +L  +  E+M  E  E  R  +  R KVDRV    + 
Sbjct: 409 AEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRR-KVDRVPGCSLI 467

Query: 480 SACGYL 485
              G++
Sbjct: 468 EVAGFV 473


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/746 (34%), Positives = 410/746 (54%), Gaps = 38/746 (5%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELA---GFG-ILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           +NS+IR +S  G   E+  L  E+    G G  +PD  T   VL  C +    G G  VH
Sbjct: 6   WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G  VK+  D+++ + N L++ Y +CG I + + +F   + +NVVSW +++   +      
Sbjct: 66  GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125

Query: 222 EAVYLFFEMVE--EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
               +  +M+   E +K + VT++  +  C     L     +  Y  +     N L+ NA
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 185

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
            V  Y KCG++  A+++F   + + +   N ++  + +    R +L    +M + G  PD
Sbjct: 186 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 245

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T+ S +SA ++L  L  G+  HG+++RN LE    +  +++ +Y+ CG+      +FD
Sbjct: 246 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 305

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M +K++VSWN++I G ++NG            P R                    A+ +
Sbjct: 306 AMEDKSLVSWNTVITGYLQNG-----------FPDR--------------------ALGV 334

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           FR M+   I++  ++M+ V  AC  L +L L +  +AY  K+ +  D  +A +L+DM+A+
Sbjct: 335 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 394

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
            G   ++ +VF  ++++  ++W A I    + G  ++A++LF EM R G  PD + F+GV
Sbjct: 395 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 454

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           LTAC+H GL+++G      M    G+ P + HY C++D+LGRAG L +AL ++     E 
Sbjct: 455 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 514

Query: 640 NDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
            DV IW SLL++C+ HQN+++    A ++ EL+PEK   +VLLSN+YA  GKW +V +VR
Sbjct: 515 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 574

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
            +M E  +RK  G S IE+N KV  F  G+        I S+   +  ++   GY PD  
Sbjct: 575 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 634

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
           +V  D+ E+EK   L  HSEKLA+ +GLI TS+   IRV KNLR+C DCH+ AKL+SKV 
Sbjct: 635 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 694

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
           +REI+VRDN RFH F+ G CSC D+W
Sbjct: 695 EREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 235/506 (46%), Gaps = 42/506 (8%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG--LGVEAISLYVELAGFGILPDKFT 140
           +T AQ  F      N  S     +N+++ G+S  G   G   +   +   G  +  D+ T
Sbjct: 93  ITNAQMIFKMNNNKNVVS-----WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 147

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
               +  C   S      ++H   +K  F  +  V N  +  Y +CG +   +RVF  + 
Sbjct: 148 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 207

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            + V SW +LI   A+ + P+ ++    +M   G+ P+S T+  ++SAC+KL++L LG  
Sbjct: 208 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 267

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V  +I    ++ +  +  +++ +Y+ CG + T + LF   +D++LV  NT+++ Y++ G 
Sbjct: 268 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 327

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
              AL +  +M+L+G +   ++M+    A + L  L  GR  H Y L++ LE    I  +
Sbjct: 328 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS 387

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMY K G    + ++F+ +  K+  SWN++I G   +G  + A ++F EM    H   
Sbjct: 388 LIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH--- 444

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIE 499
                                         D +T +GV +AC + G + +  +++     
Sbjct: 445 ----------------------------NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 476

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRR--MEKRDVSAWTAAIGAMAMEGNGEQA 557
             G+  +++    ++DM  R G   +A++V      E+ DV  W + + +  +  N E  
Sbjct: 477 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 536

Query: 558 VELFNEMLR-QGIKPDSIVFVGVLTA 582
            ++  ++   +  KP++ V +  L A
Sbjct: 537 EKVAAKLFELEPEKPENYVLLSNLYA 562



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 213/395 (53%), Gaps = 19/395 (4%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L  LK+ HC+ LKQ   +     +  V + A+ G   SL+YAQ+ F + I+    S T+ 
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCG---SLSYAQRVF-HGIR----SKTVN 212

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +N+LI G++       ++  ++++   G+LPD FT   +L+AC+K  +   G +VHG I
Sbjct: 213 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 272

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           ++   +RD+FV   +++ Y  CG++   + +FD M ++++VSW ++I    +   P  A+
Sbjct: 273 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 332

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            +F +MV  GI+   ++M+ V  AC+ L +L LG    AY  +  ++ +A +  +L+DMY
Sbjct: 333 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 392

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            K G++  + ++F   K+++    N ++  Y   GLA+EA+ + +EM   G  PD +T L
Sbjct: 393 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 452

Query: 345 SAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF- 398
             ++A    G +  G     +M   + L+  L+ +  +    IDM  + G+ + A R+  
Sbjct: 453 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDKALRVVA 508

Query: 399 DHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
           + MS +  V  W SL++    + ++E   +V +++
Sbjct: 509 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL 543



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 178/389 (45%), Gaps = 37/389 (9%)

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEE----GIKPNSVTMVCVISACAKLQNLEL 257
           RN VSW S+I   +     +E+  L  EM+EE       P+  T+V V+  CA+ + + L
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G  V  +  +L +    ++ NAL+DMY KCG +  A+ +F    ++N+V  NT++  +  
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 318 LGLAREALAILDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            G       +L +ML  G   + D VT+L+AV        L   +  H Y L+      +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + N  +  Y KCG    A R+F  + +KTV SWN+LI G  ++ D   + +   +M   
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-- 238

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                   + GL                       D  T+  + SAC  L +L L K ++
Sbjct: 239 --------ISGLLP---------------------DSFTVCSLLSACSKLKSLRLGKEVH 269

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
            +I +N +  D+ +  +++ ++  CG+      +F  ME + + +W   I      G  +
Sbjct: 270 GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 329

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACS 584
           +A+ +F +M+  GI+   I  + V  ACS
Sbjct: 330 RALGVFRQMVLYGIQLCGISMMPVFGACS 358


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 269/815 (33%), Positives = 416/815 (51%), Gaps = 47/815 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L++C  L  +   H HI +          + ++    ++G    L +A +  D   + N 
Sbjct: 9   LRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPL-HAARLIDEMPRRNA 67

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF-GILPDKFTFPFVLNACTKSSAFGEG 157
            S     YN LI  YS  GL   A+  +       G+  D+FT+   L AC+++     G
Sbjct: 68  VS-----YNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTG 122

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             VH   V  G    VF+ N L + Y  CG++ + RRVFD   E + VSW SL+    R 
Sbjct: 123 KAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRA 182

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL--ELGDRVCAYIDELGMKANAL 275
              +E + +F  M   G+  NS  +  +I  CA   ++   + + V   + + G+ A+  
Sbjct: 183 GAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLF 242

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR----LG--LAREALAILD 329
           + +A++DMY K GA+  A  LF    D N+++ N +++ + R    +G  ++REAL++  
Sbjct: 243 LASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYS 302

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           EM   G +P   T  S + A    G+   G+  HG VL++     D I + +ID+Y   G
Sbjct: 303 EMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSG 362

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             E   R                                F  +P +D ++W +M+ G  Q
Sbjct: 363 CMEDGYR-------------------------------CFRSLPKQDIVTWTSMISGCVQ 391

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
             +FE+A+ LF+  +   +K D  TM  V +AC  L      + I     K G +    +
Sbjct: 392 NELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAM 451

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
             + + M AR GD     + F+ ME RDV +W+A I + A  G    A+ +FNEM+   +
Sbjct: 452 GNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKV 511

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
            P+ + F+ VLTACSHGGLV+ G   +  M + +G+SP I H  C+VDLLGRAG L +A 
Sbjct: 512 APNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAE 571

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
             I+      + V+W SLLA+C+ H +++     A++I +L+P  S  +V+L N+Y  AG
Sbjct: 572 AFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAG 631

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
           + +  ++ R  MKE+G++K PG S IE+   VH F +GD+SHPE N I   L EM  ++ 
Sbjct: 632 ELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIE 691

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
                 + +     +   E+  L+  HSEK+A+AFG+I   ++ PIRV+KNLR+C DCHS
Sbjct: 692 KLANTDNASTGSDGISSSEQN-LVGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHS 750

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             KL+S   +REII+RD  RFH FR GSCSC D+W
Sbjct: 751 TMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/645 (37%), Positives = 356/645 (55%), Gaps = 31/645 (4%)

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           +  N   + ++I     +D    AV+L+  M +  I P+S T   V+ ACA+L    LG 
Sbjct: 65  TNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGV 124

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            + + + + G   +  +   +V  Y KCG +  A ++F +   +N+V    ++   +  G
Sbjct: 125 MIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFG 184

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
             REA+ +   +L  G RPD   ++  + A A+LGDL  GR     +   GL     +  
Sbjct: 185 KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVAT 244

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +++DMY KCG                                +E AR VF  M  +D + 
Sbjct: 245 SLVDMYTKCG-------------------------------SMEEARFVFDGMVEKDIVC 273

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           W+ M+ G     +  EA+ELF  M    ++ D   MVG  S+C  LGAL+L  W    + 
Sbjct: 274 WSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMN 333

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
                 +  L T+L+D +A+CG  + A+ V++ M+++D   + A I  +AM G    A  
Sbjct: 334 YEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFG 393

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           +F +M + GI P+   FVG+L  C+H GLV+ G H F SM+    V+P I HYGCMVDLL
Sbjct: 394 VFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLL 453

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            RAG L EA +LIK MP++ N ++WGSLL  C+ H+   +A +  +++ EL+P  SG +V
Sbjct: 454 ARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYV 513

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSNIY+++ +W    ++R  + E+G++KLPG S +EV+G VHEF  GD SHP    I  
Sbjct: 514 LLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYE 573

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L  +   L++AGY P    VL DV+E+EK++ L  HSEKLA+AF LIST     IRVVK
Sbjct: 574 KLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVK 633

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH   K +SKV  REI++RDNNRFH F  G+CSC D+W
Sbjct: 634 NLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 221/426 (51%), Gaps = 12/426 (2%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           K L   K  HC +L+  L H    +S ++       T      AQ     + K   T++ 
Sbjct: 15  KCLKHAKLAHCRLLRLNLHHDNDLLSIIL-----RSTINFSNNAQYPILVFHK-TPTNSN 68

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            F+YN++IRG         A+ LY  +    I+PD FTF FVL AC + + F  GV +H 
Sbjct: 69  TFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHS 128

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            + K GFD DVFV+  ++ FY +CG + D  +VFD+M  +NVVSWT +IC C      +E
Sbjct: 129 LVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFRE 188

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           AV LF  ++E G++P+   +V V+ ACA+L +LE G  +   + E G+  N  +  +LVD
Sbjct: 189 AVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVD 248

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG+++ A+ +F    ++++V  + ++  Y   GL REA+ +  EM     RPD   
Sbjct: 249 MYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYA 308

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M+ A+S+ A LG L  G    G +          +  ++ID Y KCG  E A  ++  M 
Sbjct: 309 MVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMK 368

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEM-----PGRDHISWNTMLGGLTQENMFEEAM 457
            K  V +N++I+GL   G V +A  VF +M     P  +H ++  +L G T   + ++  
Sbjct: 369 EKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEH-TFVGLLCGCTHAGLVDDGR 427

Query: 458 ELFRVM 463
             F  M
Sbjct: 428 HYFNSM 433


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 280/833 (33%), Positives = 418/833 (50%), Gaps = 64/833 (7%)

Query: 30  PKDSPSIGSLKNCKT----LNELKQPHCHILKQGLGHKP-----SYISKVVCTCAQMGTF 80
           P DS +   L  C T    L   K  H H++K     KP     + +  + C C +    
Sbjct: 16  PLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCF--KPCLFLLNNLLYMYCKCGETDV- 72

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
                A+K FD   K N  S     +NSLI GY+ +G   E ++L+ E     +  DKFT
Sbjct: 73  -----AKKLFDRMPKRNVVS-----WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFT 122

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F   L+ C ++     G  +H  I   G    V + N LI+ Y +CG I   R VF+   
Sbjct: 123 FSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD 182

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK--LQNLELG 258
           E + VSW SLI    R     E + L  +M+  G+  NS  +   + AC      ++E G
Sbjct: 183 ELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECG 242

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             +     +LG+  + ++  AL+D Y K G ++ A ++F    D N+V+ N +++ ++++
Sbjct: 243 KMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQM 302

Query: 319 G-----LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
                  A EA+ +  EM   G +P   T  S + A + +    CG+  H  + +  L+ 
Sbjct: 303 ETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQS 362

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
            + I N ++++Y                         SL      +G +E   + F   P
Sbjct: 363 DEFIGNALVELY-------------------------SL------SGSIEDGLKCFHSTP 391

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
             D +SW +++ G  Q   FE  + LF  +L    K D  T+  + SAC  L A+   + 
Sbjct: 392 KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 451

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+AY  K GI     +  + + M+A+CGD   A   F+  +  D+ +W+  I + A  G 
Sbjct: 452 IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGC 511

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
            ++AV+LF  M   GI P+ I F+GVL ACSHGGLV +G   F  M   HG++P + H  
Sbjct: 512 AKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSA 571

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           C+VDLLGRAG L EA   I     E + V+W SLL+AC+ H+  D     AER+ EL+PE
Sbjct: 572 CIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPE 631

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
            +  +VLL NIY  AG       +R  MK++G++K PG S IEV   VH F +GD SHP 
Sbjct: 632 AAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPN 691

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK--YLLSHHSEKLAMAFGLISTSK 791
              I   L EM   ++   Y+ +   ++ D  E + K   ++S+HSEKLA+ FG+IS  +
Sbjct: 692 SQVIYVQLEEMLEEIKKLDYIDE--KLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPR 749

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + P+RV+KNLR C  CH   KL S++ +REII+RD  RFH FR GSCSC D+W
Sbjct: 750 SAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 253/555 (45%), Gaps = 61/555 (10%)

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G+  D  T+  ++   T++ +   G   H  ++K  F   +F+ N L+  Y +CG+   
Sbjct: 13  LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            +++FD M +RNVVSW SLI    +     E + LF E     ++ +  T    +S C +
Sbjct: 73  AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
             +L LG  + A I   G+    L+ N+L+DMY KCG +D A+ +F    + + V  N++
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA--SAQLGDLLCGRMCHGYVLRN 369
           ++ YVR+G   E L +L +ML HG   +   + SA+ A  S     + CG+M HG  ++ 
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL+    +   ++D Y K G  E A +IF  M +  VV +N++IAG ++   +E+  + F
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ---METMADEF 309

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
           +                        EAM LF  M S  +K    T   +  AC  + A +
Sbjct: 310 A-----------------------NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFE 346

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
             K I+A I K  +  D  +  ALV++++  G  +  ++ F    K DV +WT+ I    
Sbjct: 347 CGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHV 406

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF------------- 596
             G  E  + LF+E+L  G KPD      +L+AC++   V  G  +              
Sbjct: 407 QNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI 466

Query: 597 -----------------RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP--- 636
                             +MT     +P IV +  M+    + G   EA+DL + M    
Sbjct: 467 IQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSG 526

Query: 637 VEPNDVIWGSLLAAC 651
           + PN + +  +L AC
Sbjct: 527 IAPNHITFLGVLVAC 541


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/633 (36%), Positives = 365/633 (57%), Gaps = 37/633 (5%)

Query: 214  CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            C+ R L KEA+    EM  +G++        V++ C     +  G RV A++ +   +  
Sbjct: 456  CSNRQL-KEAL---LEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPP 511

Query: 274  ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
              +   L+ +Y KC  +  A+++  E  +RN+V    ++S Y + G A EAL +  EML+
Sbjct: 512  VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLM 571

Query: 334  HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
             G  P+  T  + +++         GR  H  V++   E    + ++++DMY K GK   
Sbjct: 572  SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK--- 628

Query: 394  ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                                        +  AR VF  +P RD +S   ++ G  Q  + 
Sbjct: 629  ----------------------------ICEARRVFDGLPERDVVSCTAIISGYAQLGLD 660

Query: 454  EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
            EEA++LFR +  E ++ + VT   V +A   L ALD  + +++++ +  +   + L  +L
Sbjct: 661  EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 720

Query: 514  VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPD 572
            +DM+++CG    + ++F  M +R V +W A +   +  G G +AVELF  M  +  +KPD
Sbjct: 721  IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780

Query: 573  SIVFVGVLTACSHGGLVNQGWHLFRSMTDIH-GVSPQIVHYGCMVDLLGRAGLLGEALDL 631
            S+ F+ VL+ CSHGG+ ++G  +F  M +   G  P+I HYGC+VDL GRAG + EA + 
Sbjct: 781  SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 840

Query: 632  IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
            IK MP EP   IWGSLL AC+ HQNV I  + A R+ E++ E +G +V+LSN+YASAG+W
Sbjct: 841  IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 900

Query: 692  TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             +V  VR  MKE+ + K PG S IE++  +H F + D SHP    + + +RE++ ++++A
Sbjct: 901  DDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEA 960

Query: 752  GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
            GYVP+L+ VL DVD+++K+ +L  HSEKLA+AFGLI T    P+R++KNLR+C DCH+FA
Sbjct: 961  GYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFA 1020

Query: 812  KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +S+VY RE+ +RD NRFH    G+CSC D+W
Sbjct: 1021 KFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 218/414 (52%), Gaps = 35/414 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL  C   +A  EG +VH  ++K  ++  V++   LI  Y +C  + D RRV DEM ERN
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSWT++I   ++R    EA++LF EM+  G  PN  T   V+++C      +LG ++ +
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            + +   +++  + ++L+DMY K G +  A+++F    +R++V C  I+S Y +LGL  E
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +   +   G R + VT  S ++A + L  L  GR  H +VLR  L  +  + N++ID
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG    + RIFD M  +TV+SWN+++ G  K+G                       
Sbjct: 723 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG----------------------- 759

Query: 444 LGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYI--EK 500
           LG         EA+ELF++M  E ++K D VT + V S C + G  D    I+  +  +K
Sbjct: 760 LG--------REAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQK 811

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN 553
           +G   +++    +VD+F R G  + A +  ++M     +A W + +GA  +  N
Sbjct: 812 DGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQN 865



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 171/324 (52%), Gaps = 26/324 (8%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + ++I GYS  G   EA+ L+VE+   G  P++FTF  VL +CT SS F  G Q+H  ++
Sbjct: 546 WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI 605

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  F+  +FV + L++ Y + G I + RRVFD + ER+VVS T++I   A+  L +EA+ 
Sbjct: 606 KTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALD 665

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF  +  EG++ N VT   V++A + L  L+ G +V +++    +    ++ N+L+DMY 
Sbjct: 666 LFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYS 725

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTML 344
           KCG++  ++++F    +R ++  N ++  Y + GL REA+ +   M      +PD VT L
Sbjct: 726 KCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFL 785

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-------------MIDMYMKCGKQ 391
           + +S  +           HG +   GLE +  + N              ++D++ + G+ 
Sbjct: 786 AVLSGCS-----------HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRV 834

Query: 392 EMACRIFDHMS-NKTVVSWNSLIA 414
           E A      M    T   W SL+ 
Sbjct: 835 EEAFEFIKKMPFEPTAAIWGSLLG 858



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 32/372 (8%)

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRP-----------DRVTMLSAVSASAQLGD 355
           L +T+ + + +L +  + +  +  ++ H P+             R+ + +  + S  L  
Sbjct: 395 LPSTLKTFFNQLSVEEKMIWKITSLIFHRPKQVLSSISNPFSRQRILLSTFPANSPDLKT 454

Query: 356 LLCGRMCHGYVLRNGLEG-------WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           L   R     +L  G++G       +DS+    I        Q +   +        V  
Sbjct: 455 LCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYL 514

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
              LI    K   +  AR V  EMP R+ +SW  M+ G +Q     EA+ LF  ML    
Sbjct: 515 RTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGT 574

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             +  T   V ++C       L + I++ + K      + + ++L+DM+A+ G    A +
Sbjct: 575 APNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARR 634

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS---- 584
           VF  + +RDV + TA I   A  G  E+A++LF  + R+G++ + + +  VLTA S    
Sbjct: 635 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 694

Query: 585 --HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
             HG  V+   H+ R+    +     +V    ++D+  + G L  +  +  SMP E   +
Sbjct: 695 LDHGRQVHS--HVLRAKLPFY-----VVLQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVI 746

Query: 643 IWGSLLAACQKH 654
            W ++L    KH
Sbjct: 747 SWNAMLVGYSKH 758


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/614 (38%), Positives = 352/614 (57%), Gaps = 42/614 (6%)

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           ++ N+ +   L+  Y     V +A+++F E  +RN+++ N ++ +YV  G   E + +  
Sbjct: 70  LRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFG 129

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            M     RPD  T    + A +  G ++ GR  HG   + GL     + N ++ MY KCG
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCG 189

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV--------------------- 428
               A  + D MS + VVSWNSL+ G  +N   + A EV                     
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249

Query: 429 ----------------FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
                           F +M  +  +SWN M+G   +  M  EA+EL+  M ++  + D 
Sbjct: 250 AVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           V++  V  ACG   AL L K I+ YIE+  +  ++ L  AL+DM+A+CG  ++A  VF  
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN 369

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M+ RDV +WTA I A    G G  AV LF+++   G+ PDSI FV  L ACSH GL+ +G
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F+ MTD + ++P++ H  CMVDLLGRAG + EA   I+ M +EPN+ +WG+LL AC+
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACR 489

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H + DI   AA+++ +L PE+SG +VLLSNIYA AG+W  V  +R  MK +G++K PG+
Sbjct: 490 VHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 549

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           S++EVN  +H F  GD SHP+ + I   L  +  ++++ GYVPD  + L DV+E++K+  
Sbjct: 550 SNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETH 609

Query: 773 LSHHSEKLAMAFGLISTSK-----TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           L+ HSEKLA+ F L++T +        IR+ KNLR+C DCH  AKL+S++  REII+RD 
Sbjct: 610 LAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDT 669

Query: 828 NRFHFFRQGSCSCS 841
           NRFH FR G CSC+
Sbjct: 670 NRFHVFRFGVCSCA 683



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 201/441 (45%), Gaps = 44/441 (9%)

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
            + + +  A+K FD   + N     + + N +IR Y   G   E + ++  + G  + PD
Sbjct: 85  ASLKDVASARKVFDEIPERN-----VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
            +TFP VL AC+ S     G ++HG+  K+G    +FV N L++ YG+CG + + R V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
           EMS R+VVSW SL+   A+     +A+ +  EM    I  ++ TM  ++ A +       
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT--- 256

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
                          N + V    DM+ K G              ++LV  N ++  Y++
Sbjct: 257 --------------ENVMYVK---DMFFKMGK-------------KSLVSWNVMIGVYMK 286

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
             +  EA+ +   M   G  PD V++ S + A      L  G+  HGY+ R  L     +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-- 435
            N +IDMY KCG  E A  +F++M ++ VVSW ++I+    +G    A  +FS++     
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406

Query: 436 --DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
             D I++ T L   +   + EE    F++M        R+    +A     LG     K 
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH--LACMVDLLGRAGKVKE 464

Query: 494 IYAYIEKNGIHCDMQLATALV 514
            Y +I+   +  + ++  AL+
Sbjct: 465 AYRFIQDMSMEPNERVWGALL 485



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 4/170 (2%)

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           + +++ I    + C+  L   L+  +A   D   A +VF  + +R+V      I +    
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G   + V++F  M    ++PD   F  VL ACS  G +  G  +  S T + G+S  +  
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFV 177

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
              +V + G+ G L EA  ++  M     DV+ W SL+    ++Q  D A
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEM--SRRDVVSWNSLVVGYAQNQRFDDA 225



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 12/134 (8%)

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           +KA D +  +N  S  +  + ++I  Y   G G +A++L+ +L   G++PD   F   L 
Sbjct: 361 EKARDVF--ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLA 418

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN-----CLINFYGECGDIVDGRRVFDEMS- 200
           AC+ +    EG     +  K+  D            C+++  G  G + +  R   +MS 
Sbjct: 419 ACSHAGLLEEG----RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM 474

Query: 201 ERNVVSWTSLICAC 214
           E N   W +L+ AC
Sbjct: 475 EPNERVWGALLGAC 488


>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 630

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/564 (40%), Positives = 347/564 (61%), Gaps = 8/564 (1%)

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y   G +  +  LF +  D +L L    ++     GL  +A  +  ++L     P+  T 
Sbjct: 72  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTF 131

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMS 402
            S + + +       G++ H +VL+ GL G D    T ++D+Y K G    A ++FD M 
Sbjct: 132 SSILKSCSTKS----GKLIHTHVLKFGL-GLDPYVATGLVDIYAKGGDVVSAQKVFDRMP 186

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            +++VS  ++I    K G+VE+AR +F  M  RD +SWN M+ G +Q     +A+ LF+ 
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246

Query: 463 MLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           +L++ + K D +T+V   SAC  +GAL+  +WI+ ++  + I  ++++ TAL+DM+++CG
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCG 306

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVL 580
             + A+ VF    ++D+ AW A I   AM G  + A+ LF+EM    G++P  I F+G L
Sbjct: 307 SLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTL 366

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
            AC+H GLVN+G  +F SM   +G+ P+I HYGC+V LLGRAG L  A ++IK+M +E +
Sbjct: 367 QACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEAD 426

Query: 641 DVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQ 700
            V+W S+L +C+ H    +    AE +   +   SG++VLLSNIYA  G +  VA+VR  
Sbjct: 427 SVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNL 486

Query: 701 MKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNV 760
           MKE+GI K PG S+IE++ KVHEF +GD  H +   I +MLR+M+ R++  GYVP+   V
Sbjct: 487 MKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTV 546

Query: 761 LLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDR 820
           L D++E EK+  L  HSE+LA+A+GLIST    P+++ KNLR+C DCH+  KL+SK+  R
Sbjct: 547 LHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGR 606

Query: 821 EIIVRDNNRFHFFRQGSCSCSDFW 844
           +I++RD NRFH F  GSCSC DFW
Sbjct: 607 KIVMRDRNRFHHFSDGSCSCDDFW 630



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 223/472 (47%), Gaps = 61/472 (12%)

Query: 8   SPLVLATPTVTTLTNQHKAKTTPKDSPSIGSL----KNCKTLNELKQPHCHILKQGLGHK 63
           SPL+      T+L   H   T    +P    L     N  +++E+ Q H  IL+  L   
Sbjct: 4   SPLI-----ATSLPQNHATATASFRNPPPEKLAVFIDNSHSVDEVLQIHAAILRHNLLIH 58

Query: 64  PSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAI 123
           P Y    +       +   + ++   F   I  +     LF++ + I   S  GL  +A 
Sbjct: 59  PRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD-----LFLFTAAINTASINGLKDQAF 113

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
            LYV+L    I P++FTF  +L +C+  S    G  +H  ++K G   D +V   L++ Y
Sbjct: 114 LLYVQLLSSQINPNEFTFSSILKSCSTKS----GKLIHTHVLKFGLGLDPYVATGLVDIY 169

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACAR----------------RDL-------- 219
            + GD+V  ++VFD M ER++VS T++I   A+                RD+        
Sbjct: 170 AKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMID 229

Query: 220 -------PKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
                  P +A+ LF +++ +G  KP+ +T+V  +SAC+++  LE G  +  +++   ++
Sbjct: 230 GYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIR 289

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            N  +  AL+DMY KCG+++ A  +F +   +++V  N +++ Y   G +++AL + DEM
Sbjct: 290 LNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEM 349

Query: 332 L-LHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMY 385
             + G +P  +T +  + A A  G +  G      M   Y ++  +E +      ++ + 
Sbjct: 350 QGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHY----GCLVSLL 405

Query: 386 MKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
            + G+ + A  I  +M+ +   V W+S++     +G+    +E+   + G++
Sbjct: 406 GRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQN 457


>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1111

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/549 (40%), Positives = 344/549 (62%), Gaps = 2/549 (0%)

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL--HGPRPDRVTMLSAV 347
           +D A Q+        L   N+++  + +  +  ++      +L   +G +PD  T+   V
Sbjct: 64  LDYANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLV 123

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A   LG    G   HG  +R G +    +   +I +Y + G  +   ++F+ +S    V
Sbjct: 124 QACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFV 183

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
              +++    + GDV  AR++F  MP +D I+WN M+ G  Q     EA+ LF +M  E 
Sbjct: 184 CRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEG 243

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           +KV+ V+M+ V SAC  LGALD  +W ++YIE+N I   ++L T LVD++A+CGD  +AM
Sbjct: 244 VKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAM 303

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           +VF  ME+++V  W++A+  +AM G GE+ ++LF+ M + G+ P+++ FV VL  CS  G
Sbjct: 304 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVG 363

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
            V++G   F SM +  G+ PQ+ HYGC+VDL  RAG L +A+ +I+ MP++ +  +W SL
Sbjct: 364 FVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSL 423

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L A + ++N+++   A++++ EL+    G +VLLSNIYA +  W NV+ VR  MK +G+R
Sbjct: 424 LHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVR 483

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K PG S +EVNG+VHEF  GD+SHP+ N I ++ ++++ RLR AGY  D T V+ D+DE+
Sbjct: 484 KQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEE 543

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+  L  HSEK A+AFG++S    +PIR+VKNLR+C DCH  + ++SK+++REIIVRD 
Sbjct: 544 EKEDALCLHSEKAAIAFGIMSLKADVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDR 603

Query: 828 NRFHFFRQG 836
           NRFH F+ G
Sbjct: 604 NRFHHFKDG 612



 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 185/511 (36%), Positives = 294/511 (57%), Gaps = 32/511 (6%)

Query: 335  GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
            G RP+ VT LS +SA    G+   G   HG V+++G+     + N ++++Y K       
Sbjct: 632  GFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGK------- 684

Query: 395  CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                                     GD+ S+ ++F ++  ++ +SWNTM+    Q  + E
Sbjct: 685  ------------------------TGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAE 720

Query: 455  EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
            E +  F +     +K D+ T + V   C  +G + L++ I+  I   G + +  + TAL+
Sbjct: 721  EGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALL 780

Query: 515  DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            D++A+ G  + +  VF  +   D  AWTA + A A  G G  A++ F  M+  G+ PD +
Sbjct: 781  DLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHV 840

Query: 575  VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
             F  +L ACSH GLV +G + F +M+  + + P++ HY CMVDL+GR+GLL +A  LIK 
Sbjct: 841  TFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKE 900

Query: 635  MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
            MP+EP+  +WG+LL AC+ +++  +   AA+R+ EL+P     +++LSNIY+++G W + 
Sbjct: 901  MPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDA 960

Query: 695  ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR-DAGY 753
            +R+R  MK++G+ +  G S IE   K+H+F  GD SHPE   I   L+E+  +++ + G+
Sbjct: 961  SRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGF 1020

Query: 754  VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
                  VL DVDE  K+ +++ HSEK+AMAFGL+  S   PI + KNLR+C DCH  AK 
Sbjct: 1021 KSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKA 1080

Query: 814  VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S +  R II+RD+ RFH F +GSCSC D+W
Sbjct: 1081 ISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 1111



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 193/416 (46%), Gaps = 43/416 (10%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P+I  L +  T  E++Q H  +   G       + + V   A +     L YA +     
Sbjct: 16  PAISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVA-LSDHTYLDYANQ----- 69

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKS 151
           I D     TLF  NS+IR +    +  ++   Y  +  +G G+ PD +T  F++ ACT  
Sbjct: 70  ILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGL 129

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE-------------------------- 185
                G+QVHG  ++ GFD D  V+  LI+ Y E                          
Sbjct: 130 GMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMV 189

Query: 186 -----CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
                CGD+   R++F+ M E++ ++W ++I   A+    +EA+ LF  M  EG+K N V
Sbjct: 190 TACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGV 249

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           +M+ V+SAC +L  L+ G    +YI+   +K    +   LVD+Y KCG +D A ++F   
Sbjct: 250 SMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGM 309

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           +++N+   ++ ++     G   + L +   M   G  P+ VT +S +   + +G +  G+
Sbjct: 310 EEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 369

Query: 361 MCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLI 413
             H   +RN  G+E        ++D+Y + G+ E A  I   M  K   + W+SL+
Sbjct: 370 K-HFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLL 424



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 177/407 (43%), Gaps = 66/407 (16%)

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAK 251
           ++ D   +  + +  S+I A  +  +P+++   +  ++  G  +KP++ T+  ++ AC  
Sbjct: 69  QILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTG 128

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYM-------------------------- 285
           L   E G +V       G   +  +   L+ +Y                           
Sbjct: 129 LGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAM 188

Query: 286 -----KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
                +CG V  A++LF    +++ +  N ++S Y ++G +REAL +   M L G + + 
Sbjct: 189 VTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNG 248

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           V+M+S +SA  QLG L  GR  H Y+ RN ++    +  T++D+Y KCG  + A  +F  
Sbjct: 249 VSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWG 308

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  K V +W+S + GL  NG                                 E+ ++LF
Sbjct: 309 MEEKNVYTWSSALNGLAMNG-------------------------------FGEKCLKLF 337

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
            +M  + +  + VT V V   C  +G +D  +  +  +    GI   +     LVD++AR
Sbjct: 338 SLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYAR 397

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
            G  + A+ + ++M  K   + W++ + A  M  N E  V    +ML
Sbjct: 398 AGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKML 444



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 163/349 (46%), Gaps = 31/349 (8%)

Query: 111 RGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFD 170
           RGY  +G   E +S  +  +  G  P++ TF  +++AC       EGV +HG ++K G  
Sbjct: 613 RGY--LGKCFEVLSRMMR-SEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVL 669

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
            +V V N L+N YG+ GD++   ++F+++S +N+VSW ++I    +  L +E +  F   
Sbjct: 670 EEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMS 729

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
              G+KP+  T + V+  C  +  + L   +   I   G  AN  +  AL+D+Y K G +
Sbjct: 730 RWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRL 789

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           + +  +F E    + +    +++ Y   G  R+A+   + M+ +G  PD VT    ++A 
Sbjct: 790 EDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNAC 849

Query: 351 AQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
           +  G +  GR     M   Y +   L+ +    + M+D+  + G  + A           
Sbjct: 850 SHSGLVEEGRYYFETMSKRYRIEPRLDHY----SCMVDLMGRSGLLQDA----------- 894

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                    GLIK   +E +  V+  + G   +  +T LG    + +FE
Sbjct: 895 --------YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFE 935



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 78/157 (49%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
            L  +N++I  +   GL  E ++ +      G+ PD+ TF  VL  C           +H
Sbjct: 702 NLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIH 761

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G I+  GF+ +  +   L++ Y + G + D   VF E++  + ++WT+++ A A     +
Sbjct: 762 GLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGR 821

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           +A+  F  MV  G+ P+ VT   +++AC+    +E G
Sbjct: 822 DAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEG 858



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 7/199 (3%)

Query: 459 LFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           L R+M SE   + + VT + + SAC + G  +    I+  + K+G+  ++++  AL++++
Sbjct: 623 LSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLY 682

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            + GD   + ++F  +  +++ +W   I      G  E+ +  FN     G+KPD   F+
Sbjct: 683 GKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFL 742

Query: 578 GVLTACSHGGLV--NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
            VL  C   G+V  +QG H    +    G +        ++DL  + G L ++  +   +
Sbjct: 743 AVLRVCEDIGVVRLSQGIH---GLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEI 799

Query: 636 PVEPNDVIWGSLLAACQKH 654
              P+ + W ++LAA   H
Sbjct: 800 -TSPDSMAWTAMLAAYATH 817



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 11/128 (8%)

Query: 98  ETSATLFM---------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC 148
           E S+T+F+         + +++  Y+  G G +AI  +  +  +G+ PD  TF  +LNAC
Sbjct: 790 EDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNAC 849

Query: 149 TKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVS 206
           + S    EG      + K    +  +   +C+++  G  G + D   +  EM  E +   
Sbjct: 850 SHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGV 909

Query: 207 WTSLICAC 214
           W +L+ AC
Sbjct: 910 WGALLGAC 917


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/771 (32%), Positives = 408/771 (52%), Gaps = 51/771 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           +L  A++ F+     NE S T+     +I GYS      EA +LY E+   G+ PD  TF
Sbjct: 92  NLFRARELFESMFSRNEVSWTI-----MIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITF 146

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE--CGDIVDGRRVFDEM 199
             +L+    ++   E +Q+H  I++ GF   + V N L++ Y +  C DI    ++F EM
Sbjct: 147 ATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDI--ASQLFSEM 204

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             ++ VS+  +I    +    +EA+ LF +M     +P+  T   ++      +++  G 
Sbjct: 205 PTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQ 264

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++     +     +  + NAL+D Y K   +D AK LF E  + + V  N I++ Y   G
Sbjct: 265 QIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNG 324

Query: 320 LAREALAILDEMLLHGPRPDR-----VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
              ++  +     L G   DR      TMLS   A+ +L +L  GR  H   +       
Sbjct: 325 QYEKSFDLFKR--LQGTSFDRKNFPFATMLSV--AAIEL-NLSMGRQTHAQAVVTTAVSE 379

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N ++DMY KC K E A RIF                               + +  
Sbjct: 380 VQVGNALVDMYAKCEKFEDANRIF-------------------------------ANLAY 408

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           R+ + W  ++    Q+   EEA+++F+ M  E +  D+ T      A   L ++ L K +
Sbjct: 409 RNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQL 468

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           ++ + + G+   +   + LVDM+A CG  + A++VF+ M  R++  W A I A +  G+ 
Sbjct: 469 HSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDA 528

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           E     F +M+  G+ PDS+ F+ VLTACSH GLV +    F SMT ++ + P+  HY  
Sbjct: 529 EATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYAT 588

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP-E 673
           M+D+L R+G   EA +LI  MP EP++V+W S+L +C+ H+N D+A  AA+++ ++D   
Sbjct: 589 MIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALR 648

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
            +  +V +SNIYA AGKW N A+V+  M+E+G++K+   S +E++ +VH FT+ D +HP+
Sbjct: 649 DAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQ 708

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I   +  +   +   GY PD +  L +VDE+ K   L +HSE+LA+AF LI+T +  
Sbjct: 709 TEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGS 768

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           PI ++KNLR C DCH+  K++SK+  REI VRD++RFH FR GSCSC D+W
Sbjct: 769 PIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 246/534 (46%), Gaps = 49/534 (9%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G  P+   F F L    +++   +  Q+     +M + R+    N +++ Y +  ++   
Sbjct: 41  GFDPEISRFNFKLKDLVRANQIAKARQLFD---EMPY-RNTSSVNMMVSGYVKSRNLFRA 96

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R +F+ M  RN VSWT +I   ++ + PKEA  L+ EM   G+KP+ +T   ++S     
Sbjct: 97  RELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDT 156

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             L+   ++ ++I   G  A+ ++ N+LVD Y K   +D A QLF E   ++ V  N ++
Sbjct: 157 TTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMI 216

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           + Y + G   EAL +  +M     +P   T  + +  S    D++ G+  HG  ++    
Sbjct: 217 TGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYV 276

Query: 373 GWD-SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
            WD  + N ++D Y K    ++A  +FD M     VS+N +I G   NG  E + ++F  
Sbjct: 277 -WDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKR 335

Query: 432 MPG----RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           + G    R +  + TML           A+EL  + +  +     V    V+        
Sbjct: 336 LQGTSFDRKNFPFATMLS--------VAAIEL-NLSMGRQTHAQAVVTTAVS-------- 378

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
                             ++Q+  ALVDM+A+C   + A ++F  +  R+   WTA I  
Sbjct: 379 ------------------EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISI 420

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
              +G  E+A+++F EM R+ +  D   F   L A ++   V+ G  L  S+  + G+  
Sbjct: 421 YVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRL-GLLS 479

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            +     +VD+    G + +A+++ K MP + N V W +L++A    QN D  A
Sbjct: 480 SVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISAYS--QNGDAEA 530



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 187/422 (44%), Gaps = 16/422 (3%)

Query: 58  QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
            GL  K SY+  +    A +  +    Y   A + + +  E       YN +I GY+  G
Sbjct: 267 HGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGV--SYNIIITGYAWNG 324

Query: 118 LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
              ++  L+  L G       F F  +L+          G Q H   V      +V V N
Sbjct: 325 QYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGN 384

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
            L++ Y +C    D  R+F  ++ RN V WT++I    ++   +EA+ +F EM  E +  
Sbjct: 385 ALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHG 444

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +  T    + A A L ++ LG ++ + +  LG+ ++    + LVDMY  CG++  A ++F
Sbjct: 445 DQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVF 504

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL- 356
            E  DRN+V  N ++S Y + G A    +   +M+  G  PD V+ LS ++A +  G + 
Sbjct: 505 KEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVE 564

Query: 357 ----LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNS 411
                   M   Y L    + +     TMID+  + G+   A  +   M      V W+S
Sbjct: 565 KALWYFNSMTQVYKLDPRRKHY----ATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSS 620

Query: 412 LIAG--LIKNGDV--ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           ++    + KN D+  ++A ++F     RD  ++  M     +   +E A ++ + M    
Sbjct: 621 VLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERG 680

Query: 468 IK 469
           +K
Sbjct: 681 VK 682



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 17/279 (6%)

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +++ G +   S  N  +   ++  +   A ++FD M  +   S N +++G +K+ ++  A
Sbjct: 37  IVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRA 96

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           RE+F  M  R+ +SW  M+GG +Q N  +EA  L+  M    +K D +T   + S     
Sbjct: 97  RELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDT 156

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
             L     I+++I + G    + +  +LVD + +      A Q+F  M  +D  ++   I
Sbjct: 157 TTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMI 216

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL--TACSHGGLVNQGWHLFRSMTDIH 603
                 G  E+A++LF +M     +P    F  +L  +  S   +  Q          IH
Sbjct: 217 TGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQ---------QIH 267

Query: 604 GVSPQ------IVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           G++ +      I     ++D   +   +  A +L   MP
Sbjct: 268 GLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP 306


>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Glycine max]
          Length = 617

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/557 (40%), Positives = 342/557 (61%), Gaps = 8/557 (1%)

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
           + LF +    N      ++  Y   G   +AL+    M      P   T  +  SA A +
Sbjct: 63  RLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAV 122

Query: 354 GDLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
                G   H   L  G  G+ S   + N +IDMY+KCG    A  +FD M  + V+SW 
Sbjct: 123 RHSALGAQLHAQTLLLG--GFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWT 180

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
            LI    + GD+ +AR++F  +P +D ++W  M+ G  Q  M  +A+E+FR +  E +++
Sbjct: 181 GLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEI 240

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC--DMQLATALVDMFARCGDPQRAMQ 528
           D VT+VGV SAC  LGA   A WI    E +G     ++ + +AL+DM+++CG+ + A  
Sbjct: 241 DEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYD 300

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           VF+ M +R+V ++++ I   A+ G    A++LF +ML  G+KP+ + FVGVLTACSH GL
Sbjct: 301 VFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGL 360

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V+QG  LF SM   +GV+P    Y CM DLL RAG L +AL L+++MP+E +  +WG+LL
Sbjct: 361 VDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALL 420

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
            A   H N D+A  A++R+ EL+P+  G ++LLSN YASAG+W +V++VR  ++E+ ++K
Sbjct: 421 GASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKK 480

Query: 709 LPGSSSIEV-NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
            PG S +E  NG +H+F +GD SHP++N I   L ++  RL+  GY P+L+++   ++++
Sbjct: 481 NPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGINDR 540

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+ LL  HSEKLA+AFGL+ST     I+++KNLR+C DCH      SKV  R+I+VRDN
Sbjct: 541 EKRLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDN 600

Query: 828 NRFHFFRQGSCSCSDFW 844
            RFH F  G+CSCS+FW
Sbjct: 601 TRFHHFLNGACSCSNFW 617



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 205/451 (45%), Gaps = 59/451 (13%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+ C +LN+ K+ H  I  + L      ++K++     +      +Y +  F      N 
Sbjct: 15  LERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNP 74

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
                F + +LIR Y+  G   +A+S Y  +    + P  FTF  + +AC        G 
Sbjct: 75  -----FAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGA 129

Query: 159 QVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR- 216
           Q+H   + +G F  D++V N +I+ Y +CG +   R VFDEM ER+V+SWT LI A  R 
Sbjct: 130 QLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRI 189

Query: 217 ------RDL------------------------PKEAVYLFFEMVEEGIKPNSVTMVCVI 246
                 RDL                        P +A+ +F  + +EG++ + VT+V VI
Sbjct: 190 GDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVI 249

Query: 247 SACAKLQNLELGD--RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           SACA+L   +  +  R  A     G+  N L+ +AL+DMY KCG V+ A  +F   ++RN
Sbjct: 250 SACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERN 309

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +   ++++  +   G AR A+ +  +ML  G +P+ VT +  ++A +  G +  G+    
Sbjct: 310 VFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFA 369

Query: 365 YVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
            + +  G+     +   M D+  + G  E A ++ + M                    +E
Sbjct: 370 SMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMP-------------------ME 410

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
           S   V+  + G  H+  N  +  +  + +FE
Sbjct: 411 SDGAVWGALLGASHVHGNPDVAEIASKRLFE 441


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/667 (37%), Positives = 368/667 (55%), Gaps = 58/667 (8%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           LP+   F  +L++C +S +      VH  I+   F  ++F++N LI+ YG+C  + D R+
Sbjct: 12  LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE---------------------- 232
           +FD M +RN  +W SLI    +     EA  LF  M E                      
Sbjct: 72  LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131

Query: 233 ---------EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
                    E    N  +    +SACA L +L +G +V A + +     +  M +AL+DM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG+V  A+++F    +RNLV  N++++ Y + G A EAL +   M+  G  PD VT+
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            S VSA A L  L  G   H  V++ N       + N ++DMY KC K   A R+FD MS
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            + VVS  S+++G  +   V++AR +FS+M  R+ +SWN ++ G TQ    EEA+ LFR+
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRL 371

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           +  E I                        W   Y   N +  D+ +  +L+DM+ +CG 
Sbjct: 372 LKRESI------------------------WPTHYTFGNLLKSDIFVGNSLIDMYMKCGS 407

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            +   +VF +M++RD  +W A I   A  G G +A+++F +ML  G KPD +  +GVL A
Sbjct: 408 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCA 467

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CSH GLV +G H F SM + HG+ P   HY CMVDLLGRAG L EA +LI++MPV P+ V
Sbjct: 468 CSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV 526

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WGSLLAAC+ H N+++  +AAE++ E+DP  SG +VLLSN+YA  G+W +V RVR  M+
Sbjct: 527 VWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMR 586

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
           +QG+ K PG S IEV  +VH F   D+SHP    I S+L+ +  +++  GY+PD  N   
Sbjct: 587 QQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD-ANDFE 645

Query: 763 DVDEQEK 769
             DEQ K
Sbjct: 646 AYDEQSK 652



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 228/475 (48%), Gaps = 51/475 (10%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS++ G++      E++  +V++     L ++++F   L+AC        G QVH  + 
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  +  DV++ + LI+ Y +CG +     VF  M ERN+V+W SLI    +     EA+ 
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNALVDMY 284
           +F  M++ G++P+ VT+  V+SACA L  L+ G ++ A + +    + + ++ NALVDMY
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KC  V+ A+++F     RN+V   +++S Y R    + A  +  +M     + + V+  
Sbjct: 295 AKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKM----TQRNVVSWN 350

Query: 345 SAVSASAQLGD----LLCGRMCH-------GYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           + ++   Q G+    L   R+          Y   N L+    + N++IDMYMKCG  E 
Sbjct: 351 ALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIED 410

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
             R+F+ M  +  VSWN++I G  +NG                        G        
Sbjct: 411 GSRVFEKMKERDCVSWNAIIVGYAQNG-----------------------YGA------- 440

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
            EA+++FR ML    K D VTM+GV  AC + G ++  +  +  +E++G+       T +
Sbjct: 441 -EALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCM 499

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           VD+  R G    A  +   M    D   W + + A  + GN   G+ A E   E+
Sbjct: 500 VDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEI 554



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 185/374 (49%), Gaps = 24/374 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           S+  A++ F   I+ N     L  +NSLI  Y   G   EA+ ++V +   G+ PD+ T 
Sbjct: 197 SVACAEEVFSGMIERN-----LVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
             V++AC    A  EG+Q+H  +VK   F  D+ + N L++ Y +C  + + RRVFD MS
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            RNVVS TS++   AR    K A ++F +M +     N V+   +I+   +    E   R
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQR----NVVSWNALIAGYTQNGENEEALR 367

Query: 261 VCAYIDELG-----------MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           +   +               +K++  + N+L+DMYMKCG+++   ++F + K+R+ V  N
Sbjct: 368 LFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWN 427

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            I+  Y + G   EAL I  +ML+ G +PD VTM+  + A +  G +  GR     +  +
Sbjct: 428 AIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEH 487

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREV 428
           GL         M+D+  + G    A  + + M  N   V W SL+A    +G++E  +  
Sbjct: 488 GLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHA 547

Query: 429 FSEMPGRDHISWNT 442
             ++   D   WN+
Sbjct: 548 AEKLLEID--PWNS 559


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/767 (34%), Positives = 406/767 (52%), Gaps = 51/767 (6%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++  D   + N  S     +N LI  YS  GL   ++         G+  D+F++   L
Sbjct: 62  ARRLLDEMPRRNAVS-----FNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAAL 116

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC+++     G  VH   +  G    VFV N L++ Y +CG++ + RRVFD   ER+ V
Sbjct: 117 AACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDV 176

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN--LELGDRVCA 263
           SW SL+    R    +E V +F  M   G+  NS  +  VI  C+   +  +++ + V  
Sbjct: 177 SWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHG 236

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR----LG 319
            + + G+ ++  +V+A++DMY K GA+  A  LF   ++ N+V+ NT+++ + R    +G
Sbjct: 237 CVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIG 296

Query: 320 --LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
             +A EAL +  E+   G +P   T  S + A    G L  G+  HG V++   +  D I
Sbjct: 297 KEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFI 356

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            + +ID+Y   G  E   R                                F   P  D 
Sbjct: 357 GSALIDLYFNSGCMEDGFR-------------------------------CFRSSPKHDI 385

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           ++W  M+ G  Q  + E+A+ LF   L   +K D  T+  V +AC  L      + I  +
Sbjct: 386 VTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCF 445

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             K+G      +  + V M+AR GD   A + F+ ME  DV +W+A I   A  G    A
Sbjct: 446 ATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDA 505

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +  F+EM+   + P+ I F+GVLTACSHGGLV++G   + +MT  +G+SP I H  C+VD
Sbjct: 506 LHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVD 565

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGRAG L +A   I +     + VIW SLLA+C+ H++++     A RI EL+P  S  
Sbjct: 566 LLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSAS 625

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +V+L N+Y  AG+ +  ++ R  MK++G++K PG S IE+   VH F +GD+SHPE + I
Sbjct: 626 YVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAI 685

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
            + L EM  R      +  L     ++ ++E+  L++ HSEKLA+A G+I   ++ PIRV
Sbjct: 686 YTKLEEMLSR------IEKLATTDTEISKREQN-LMNCHSEKLAVALGMIHLPQSAPIRV 738

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +KNLR+C DCHS  KL+SK  +REII+RD  RFH FR GSCSC+D+W
Sbjct: 739 MKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 214/485 (44%), Gaps = 31/485 (6%)

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
           +F+ N L+  Y   G  +  RR+ DEM  RN VS+  LI A +R  L   ++        
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
            G+  +  +    ++AC++  +L  G  V A     G+ +   + N+LV MY KCG +  
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A+++F   ++R+ V  N+++S YVR G   E + +   M   G   +   + S +   + 
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 353 LGD--LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
            GD  +      HG V++ GL+    + + MIDMY K G    A  +F  +    VV +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++IAG  +                       T++G    + +  EA+ L+  + S  ++ 
Sbjct: 283 TMIAGFCRT---------------------ETVIG----KEVASEALTLYSEVQSRGMQP 317

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
              T   V  AC   G L+  K I+  + K     D  + +AL+D++   G  +   + F
Sbjct: 318 TEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCF 377

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           R   K D+  WTA +         E+A+ LF+E L  G+KPD      V+ AC+   +  
Sbjct: 378 RSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVAR 437

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLA 649
            G  + +      G     V     V +  R+G +  A    + M  E +DV+ W ++++
Sbjct: 438 AGEQI-QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEM--ESHDVVSWSAVIS 494

Query: 650 ACQKH 654
              +H
Sbjct: 495 CHAQH 499


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/772 (32%), Positives = 415/772 (53%), Gaps = 49/772 (6%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  L+ A++ FD  ++    S T+     LI GY       EA  LY ++   GI PD  
Sbjct: 87  FGKLSKARELFDGMVERTAVSWTI-----LIGGYLQSNQSKEAFRLYADMRRGGIEPDYV 141

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L+   +       VQ+H  ++K+G++ ++ V N L++ Y +   +    ++F  M
Sbjct: 142 TLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM 201

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             ++ V++ SL+   +   L +EA+ LF E+   GIKP+  T   ++SA   L + + G 
Sbjct: 202 LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQ 261

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           +V  ++ +     N  + NAL+D Y K   VD   +LF E  + + +  N ++++Y   G
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNG 321

Query: 320 LAREALAILDEMLLHGPRPDR-----VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
             +E+  +  +  L   R DR      T+LS  ++S    +L  GR  H   +  G    
Sbjct: 322 QFKESFDLFRK--LQFTRFDRRQFPFATLLSIATSSL---NLRMGRQIHCQAITVGANFE 376

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N ++DMY KC   + A +IFD+++ K+                             
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKST---------------------------- 408

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
              + W  M+    Q+   EE + +F  M    +  D+ T   +  AC  L ++ L + +
Sbjct: 409 ---VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           ++ + ++G   ++   +AL+D +A+CG    A++ F  M +R+  +W A I A A  GN 
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVHYG 613
           +  +  F +M++ G KPDS+ F+ VL+ACSH G V +  WH F SMT I+ V+P+  HY 
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH-FNSMTQIYEVTPKREHYT 584

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL-DP 672
            MVD+L R G   EA  L+  MP EP++++W S+L +C+ H+N ++A  AA+R+  + D 
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDL 644

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
             +  ++ +SNIYA AG+W NVA+V+  M+++G+RK+P  S +E+  + H F++ D+SHP
Sbjct: 645 RDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHP 704

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           EM  I   +  ++  +   GY PD T  L DVDE  K   L +HSE+ A+AF L++T   
Sbjct: 705 EMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDG 764

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PI V+KNLR C DCH+  K++S++ +REIIVRD++RFH F+ G CSC D+W
Sbjct: 765 SPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 233/504 (46%), Gaps = 34/504 (6%)

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           G+ V  H    +M   ++    N +I+ + + G +   R +FD M ER  VSWT LI   
Sbjct: 57  GDLVHAHQVFDQMP-AKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGY 115

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            + +  KEA  L+ +M   GI+P+ VT+V ++S   +L+   +  ++  ++ +LG + N 
Sbjct: 116 LQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNL 175

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           ++ N+LVD Y K   +  A QLF    +++ V  N++M+ Y   GL  EA+ +  E+   
Sbjct: 176 MVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS 235

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G +P   T  + +SA+  L D   G+  HG+VL+        + N ++D Y K  + +  
Sbjct: 236 GIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEV 295

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            ++F  M     +S+N +I     NG                                F+
Sbjct: 296 GKLFXEMPELDGISYNVVITSYAWNGQ-------------------------------FK 324

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           E+ +LFR +   R    +     + S       L + + I+      G + + ++  ALV
Sbjct: 325 ESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALV 384

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+A+C   + A ++F  +  +    WTA I A   +G  E+ + +F++M R G+  D  
Sbjct: 385 DMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQA 444

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F  +L AC++   ++ G  L  S+    G    +     ++D   + G + +A+     
Sbjct: 445 TFASILRACANLASISLGRQL-HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGE 503

Query: 635 MPVEPNDVIWGSLLAACQKHQNVD 658
           MP E N V W +L++A  ++ NVD
Sbjct: 504 MP-ERNSVSWNALISAYAQNGNVD 526



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 147/596 (24%), Positives = 252/596 (42%), Gaps = 79/596 (13%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           +T N + Q H H++K G  +     + +V    +      L  A + F + +  N+ + T
Sbjct: 154 ETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKT---HCLYLASQLFKHML--NKDTVT 208

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
              +NSL+ GYS  GL  EAI L++EL   GI P  FTF  +L+A         G QVHG
Sbjct: 209 ---FNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            ++K  F  +VFV N L+++Y +   + +  ++F EM E + +S+  +I + A     KE
Sbjct: 266 FVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKE 325

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           +  LF ++              ++S      NL +G ++      +G    + + NALVD
Sbjct: 326 SFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVD 385

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KC     A+++F     ++ V    ++S YV+ G   E + +  +M   G   D+ T
Sbjct: 386 MYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQAT 445

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
             S + A A L  +  GR  H  ++R+G        + ++D Y KCG    A + F  M 
Sbjct: 446 FASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            +  VSWN+LI+   +NG+V+                                 +  F+ 
Sbjct: 506 ERNSVSWNALISAYAQNGNVDG-------------------------------TLNSFQQ 534

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           M+    K D V+ + V SAC + G ++ A W +                           
Sbjct: 535 MIQSGYKPDSVSFLSVLSACSHCGFVEEALWHF--------------------------- 567

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
                Q++    KR+   +T+ +  +   G  ++A +L  EM     +P  I++  VL +
Sbjct: 568 -NSMTQIYEVTPKRE--HYTSMVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLNS 621

Query: 583 C---SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           C    +  L  +      +M D+   +P    Y  M ++   AG       + K+M
Sbjct: 622 CRIHKNHELAKKAADRLFNMEDLRDAAP----YINMSNIYAVAGQWDNVAKVKKAM 673



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 3/250 (1%)

Query: 337 RPDRVTMLSAV---SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           +P R T+   +   ++ A    L    +   ++++ G        N  ++ +++ G    
Sbjct: 2   KPYRATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVH 61

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++FD M  K  +S N +I+G +K G +  ARE+F  M  R  +SW  ++GG  Q N  
Sbjct: 62  AHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQS 121

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           +EA  L+  M    I+ D VT+V + S  G L   ++   I+ ++ K G   ++ +  +L
Sbjct: 122 KEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSL 181

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VD + +      A Q+F+ M  +D   + + +   + EG  E+A+ELF E+   GIKP  
Sbjct: 182 VDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSD 241

Query: 574 IVFVGVLTAC 583
             F  +L+A 
Sbjct: 242 FTFAALLSAA 251


>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
 gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/585 (39%), Positives = 338/585 (57%), Gaps = 33/585 (5%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASA 351
           A++LF + ++ ++ + NT++           AL +  EM       PD  +    + A+A
Sbjct: 58  ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
               L  G   H   +  GL+    +  T+I MY +C     A ++FD M    +V+WN+
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNA 177

Query: 412 LIA-------------------------------GLIKNGDVESAREVFSEMPGRDHISW 440
           ++A                               G  K G+++ AREVF +MP +D +SW
Sbjct: 178 IVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSW 237

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           +TM+ G      F +A   FR +  E ++ + V++ GV SAC   GA +  + ++ ++EK
Sbjct: 238 STMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEK 297

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           +G    + +  AL+D +++CG+   A  VF  M +R   +WTA I  MAM G GE+A+ L
Sbjct: 298 SGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRL 357

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           FNEM    IKPDSI F+ +L ACSH GLV+ G   F  M + +G+ P I HYGCMVDL G
Sbjct: 358 FNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYG 417

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAG L +A D +  MP+ PND++W +LL AC  H N+ +A     +++ELDPE SG HVL
Sbjct: 418 RAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVL 477

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSNIYA AGKW +VA +R  M  Q ++K PG S IEVN  ++ F +G++ +         
Sbjct: 478 LSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQK 537

Query: 741 LREMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           LRE+  RLR + GYVP++ +VL D++ +EK+  +S HSEKLA+AFG+    +   IRVVK
Sbjct: 538 LREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVK 597

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+  KL+SKVY+ EI+VRD +RFH F  GSCSC D+W
Sbjct: 598 NLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 236/519 (45%), Gaps = 81/519 (15%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
              CK+L  +KQ    I K  L   P    K++  CA +   +SL YA++ F      + 
Sbjct: 12  FSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCA-VTLPDSLHYARRLFL-----DI 65

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI-LPDKFTFPFVLNACTKSSAFGEG 157
            +  +FMYN+LIRG S       A+ L+VE+    + LPD F+F F+L A     A   G
Sbjct: 66  RNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNG 125

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           +Q+H   V  G D  +FV   LI+ Y EC  +V  R+VFDEM E N+V+W +++ AC R 
Sbjct: 126 LQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRC 185

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           +  K+A  +F                     C  ++NL                      
Sbjct: 186 EGVKDAEQVF--------------------RCMPIRNLT-------------------SW 206

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N ++  Y K G +  A+++F +   ++ V  +T++  +   G   +A A   E+   G R
Sbjct: 207 NIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMR 266

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           P+ V++   +SA AQ G    GR+ HG+V ++G     S+ N +ID Y KCG  +MA  +
Sbjct: 267 PNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLV 326

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD+M  ++ VSW ++IAG+  +G                                 EEA+
Sbjct: 327 FDNMLRRSAVSWTAMIAGMAMHG-------------------------------YGEEAI 355

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDM 516
            LF  M    IK D +T + +  AC + G +DL   +    +   GI   ++    +VD+
Sbjct: 356 RLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDL 415

Query: 517 FARCGDPQRAMQVFRRM--EKRDVSAWTAAIGAMAMEGN 553
           + R G  Q+A     +M     D+  W   +GA ++ GN
Sbjct: 416 YGRAGKLQQAYDFVCQMPISPNDI-VWRTLLGACSIHGN 453


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/636 (37%), Positives = 364/636 (57%), Gaps = 39/636 (6%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALV--DMYMKCGAVDTAKQLFGECKD 302
           +++ C  L+NL+   +V AY+ + G+  + ++   L+         A+D A++LF    +
Sbjct: 11  LLTNCRSLKNLK---QVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPN 67

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRM 361
            ++ + NT++         + +L    EM      P D  +    + A+A    L  G  
Sbjct: 68  PDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQ 127

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI-------- 413
            H   + +GL+    +  T++ MY +CG    A ++F+ M    VV+WN+++        
Sbjct: 128 LHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGD 187

Query: 414 -----------------------AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
                                  AG  K G++E AR++F EMP +D +SW+TM+ G    
Sbjct: 188 VKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHN 247

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
             F EA   FR +    ++ + V++ G  SAC   GA++  K ++ +IEK+G    + + 
Sbjct: 248 GFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVN 307

Query: 511 TALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
            AL+D +++CG+   A  VF RM EKR + +WT+ I  +AM G GE+A++LF+EM   GI
Sbjct: 308 NALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGI 367

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           +PD I F+ +L ACSH GL+ +G+  F  M DI+ + P I HYGCMVDL GRAG L +A 
Sbjct: 368 RPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAY 427

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           + I  MPV P  +IW +LL AC  H NV +A    ER++ELDP  SG HVLLSNIYA AG
Sbjct: 428 EFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAG 487

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
           KW +VA VR  M +Q + K PG S IEV+  ++ F +G+  +         L+E+  +LR
Sbjct: 488 KWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLR 547

Query: 750 DAG-YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
             G Y+P++ +VL D++++EK+  +S HSEKLA+AFG+    K   IR+VKNLR+C DCH
Sbjct: 548 VEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCH 607

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  KL+SKVY  EI+VRD +RFH F+ GSCSC D+W
Sbjct: 608 TVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 204/467 (43%), Gaps = 83/467 (17%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L NC++L  LKQ H ++ K GL   P    K++   A +   ++L YA++ F ++     
Sbjct: 12  LTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSA-VSVPDALDYARRLFLHF----- 65

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP-DKFTFPFVLNACTKSSAFGEG 157
            +  +FM+N+LIRG +       ++  +VE+      P D F+F F+L A     +   G
Sbjct: 66  PNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESG 125

Query: 158 VQ------VHG---------AIVKM-------GFDRDVFVE------------------- 176
           +Q      VHG          +V M        F + VF E                   
Sbjct: 126 IQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRC 185

Query: 177 ---------------------NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
                                N ++  Y + G++   R++F EM  ++ VSW+++I   A
Sbjct: 186 GDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFA 245

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                 EA   F E+ + G++PN V++   +SACA    +E G  +  +I++ G      
Sbjct: 246 HNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVS 305

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKD-RNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           + NAL+D Y KCG V  A+ +F    + R++V   ++++     G   EA+ +  EM   
Sbjct: 306 VNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEES 365

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           G RPD +  +S + A +  G +  G     +M   Y +   +E +      M+D+Y + G
Sbjct: 366 GIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHY----GCMVDLYGRAG 421

Query: 390 KQEMACRIFDHMSN-KTVVSWNSLIAGLIKNGDV---ESAREVFSEM 432
           + + A     HM    T + W +L+     +G+V   E  +E  SE+
Sbjct: 422 QLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSEL 468


>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/617 (38%), Positives = 359/617 (58%), Gaps = 6/617 (0%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSE 201
           +L ACT  +   E   +H  ++  G   D F  + L+ F    E  ++    ++ +  + 
Sbjct: 60  LLEACTSMAKMKE---IHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQNLELGDR 260
            NV SW   I      + P  AV L+  M+ +G   P++ T   +   CA        + 
Sbjct: 117 LNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANE 176

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           +  ++ +LG  ++  + NA++ + + CG +  A++LF E   R+LV  N+I++ YVR GL
Sbjct: 177 ILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGL 236

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           A EA  +  +M      PD VTM+  VSASAQL +L  GR  H  +   GL     + N 
Sbjct: 237 ADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANA 296

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++DMY+KC   E A  +F++M+ KTVVSW +++ G  K G +ESA  +F+EMP +D + W
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N ++GG  Q    +EA+ LF  M +  +  D++T+V   SAC  LGALD+  W++ Y++K
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           + +  ++ L TALVDM+A+CG+ ++A+QVF  M  R+   WTA I  +A+ G    A+  
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISY 476

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F+EM+  G+ PD I F+GVL+AC HGGLV+QG   F  MT  +G+SP++ HY C+VDLLG
Sbjct: 477 FSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLG 536

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAG L EA +LI+SMP EP+ V+WG+L    + H NV +   AA ++ ELDP   G++VL
Sbjct: 537 RAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVL 596

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           L+N+Y  A  W    +VR  M+E+G+ K PG SSIE+NG V++F   D+SHP+   I   
Sbjct: 597 LANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYEC 656

Query: 741 LREMNCRLRDAGYVPDL 757
           L  +  ++      P L
Sbjct: 657 LTRLTRQIEVIEVDPSL 673



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/581 (28%), Positives = 286/581 (49%), Gaps = 74/581 (12%)

Query: 21  TNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           TN + +    + +P +  L+ C ++ ++K+ H  ++  GL      +S++V  CA +  +
Sbjct: 43  TNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCA-ISEW 101

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKF 139
            +L Y  K     I +N  +  +F +N  IRGY      + A+ LY  +   G  +PD +
Sbjct: 102 RNLDYCDK-----ILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNY 156

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+P +   C   S      ++ G ++++GFD D+FV N +I+    CG+++  R++FDE 
Sbjct: 157 TYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDES 216

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             R++VSW S+I    R  L  EA  L+++M E  + P+ VTM+ V+SA A+L+NL LG 
Sbjct: 217 CVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGR 276

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK------------------------- 294
           ++   I+E+G+     + NAL+DMY+KC  ++ AK                         
Sbjct: 277 KLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFG 336

Query: 295 ------QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
                 +LF E  ++++VL N ++  +V+   ++EALA+  EM      PD++T+++ +S
Sbjct: 337 LLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLS 396

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A +QLG L  G   H YV ++ L    ++   ++DMY KCG  + A ++F+ M  +  ++
Sbjct: 397 ACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLT 456

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W ++I GL  +G   +A   FSE                               M+S  +
Sbjct: 457 WTAIICGLALHGQPHAAISYFSE-------------------------------MISIGL 485

Query: 469 KVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
             D +T +GV SAC + G +D  + + Y    K GI   ++  + LVD+  R G  + A 
Sbjct: 486 VPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAE 545

Query: 528 QVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           ++ R M  + D   W A      + GN   GE+A     E+
Sbjct: 546 ELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLEL 586



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 204/442 (46%), Gaps = 58/442 (13%)

Query: 67  ISKVVCTCAQMGTFESLTYAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
           I  V+ +C +      L  A+K FD   ++D      L  +NS+I GY   GL  EA  L
Sbjct: 196 IIHVLVSCGE------LLAARKLFDESCVRD------LVSWNSIINGYVRCGLADEAFDL 243

Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           Y ++    ++PD+ T   V++A  +      G ++H +I +MG +  V + N L++ Y +
Sbjct: 244 YYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIK 303

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACAR-----------RDLP-------------- 220
           C +I   + +F+ M+++ VVSWT+++   A+            ++P              
Sbjct: 304 CKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGF 363

Query: 221 ------KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
                 KEA+ LF EM    + P+ +T+V  +SAC++L  L++G  +  Y+D+  +  N 
Sbjct: 364 VQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNV 423

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            +  ALVDMY KCG +  A Q+F E   RN +    I+      G    A++   EM+  
Sbjct: 424 ALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISI 483

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           G  PD +T +  +SA    G +  GR     M   Y +   L+ +    + ++D+  + G
Sbjct: 484 GLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHY----SCLVDLLGRAG 539

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLG 445
             E A  +   M      V W +L  G   +G+V   E A     E+   D   +  +  
Sbjct: 540 FLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLAN 599

Query: 446 GLTQENMFEEAMELFRVMLSER 467
                NM+E+A ++ R M+ ER
Sbjct: 600 MYGDANMWEQARKV-RKMMEER 620


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/621 (38%), Positives = 362/621 (58%), Gaps = 37/621 (5%)

Query: 229 EMVEEGIKPNS-VTMVC--VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           E++ +  K N+    +C  ++  C  L  L  G  + A +     + + +M N L+++Y 
Sbjct: 2   ELIRQQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYA 61

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +  A++LF E   R++V    +++ Y +    ++AL +L EML  G +P++ T+ S
Sbjct: 62  KCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLAS 121

Query: 346 AVSASAQLG--DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            + A++ +G  D+L GR  HG  LR G +    +   ++DMY +C   E A  IFD M +
Sbjct: 122 LLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS 181

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K                               + +SWN ++ G  ++   ++A  LF  M
Sbjct: 182 K-------------------------------NEVSWNALIAGYARKGQGDKAFCLFSNM 210

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
           L E +K    T   V  AC  +G+L+  KW++A + K G      +   L+DM+A+ G  
Sbjct: 211 LRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSI 270

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           + A +VF R+ KRDV +W + +   +  G G+ A++ F EMLR  I P+ I F+ VLTAC
Sbjct: 271 EDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTAC 330

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           SH GL+++G H F  M   + V PQI HY  MVDLLGRAG L  A+  I  MP++P   +
Sbjct: 331 SHAGLLDEGRHYF-DMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAV 389

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           WG+LL AC+ H+N+++  YAAE I ELD    G HVLL NIYA AG+W + A+VR  MKE
Sbjct: 390 WGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKE 449

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
            G++K P  S +E+  +VH F + D++HP+   I +M  +++ ++++ GYVPD ++VLL 
Sbjct: 450 SGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLC 509

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           +D+QE++  L +HSEKLA+AF L++T     IR+ KN+R+C DCHS  K VSK+ +REII
Sbjct: 510 MDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREII 569

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD NRFH F  G+CSC D+W
Sbjct: 570 VRDTNRFHHFCDGACSCEDYW 590



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 209/415 (50%), Gaps = 34/415 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  CT  +   EG  +H  ++   F  D+ ++N L+N Y +CGD+V  R++FDEMS R+
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL--GDRV 261
           VV+WT+LI   ++ D P++A+ L  EM+  G+KPN  T+  ++ A + + + ++  G ++
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
                  G  +N  +  A++DMY +C  ++ A+ +F     +N V  N +++ Y R G  
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            +A  +   ML    +P   T  S + A A +G L  G+  H  +++ G +    + NT+
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           +DMY K G  E A ++FD ++ + VVSWNS++ G  ++G                     
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHG--------------------- 299

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
             LG +        A++ F  ML  RI  + +T + V +AC + G LD  +  +  ++K 
Sbjct: 300 --LGKV--------ALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKY 349

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGNGE 555
            +   +     +VD+  R G   RA+Q    M  +  +A W A +GA  M  N E
Sbjct: 350 NVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNME 404



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 205/416 (49%), Gaps = 21/416 (5%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  LN+L +    H  +L           + ++   A+ G    L YA+K FD    
Sbjct: 22  LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCG---DLVYARKLFD---- 74

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK--SSA 153
              +S  +  + +LI GYS      +A+ L  E+   G+ P++FT   +L A +   S+ 
Sbjct: 75  -EMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTD 133

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
             +G Q+HG  ++ G+D +V+V   +++ Y  C  + + + +FD M  +N VSW +LI  
Sbjct: 134 VLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAG 193

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            AR+    +A  LF  M+ E +KP   T   V+ ACA + +LE G  V A + + G K  
Sbjct: 194 YARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLV 253

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
           A + N L+DMY K G+++ AK++F     R++V  N++++ Y + GL + AL   +EML 
Sbjct: 254 AFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLR 313

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
               P+ +T L  ++A +  G L  GR     + +  +E   S   TM+D+  + G  + 
Sbjct: 314 TRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDR 373

Query: 394 ACRIFDHMSNK-TVVSWNSLIAG--LIKNGDV-----ESAREVFSEMPGRDHISWN 441
           A +    M  K T   W +L+    + KN ++     E   E+ S  PG   + +N
Sbjct: 374 AIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYN 429


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/613 (37%), Positives = 349/613 (56%), Gaps = 38/613 (6%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           + P       +I+ACA+ +NL     + A++    +  +A ++N+L+ MY KCGAV  A+
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            +F +   R++V    +++ Y +  +  EA+ +L +ML    RP+  T  S + A+   G
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 355 DLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
               G   H   ++     WD    + + ++DMY +C + +MA  +FD + +K       
Sbjct: 176 GCSIGEQMHALAVK---YNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSK------- 225

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
                                   + +SWN ++ G  ++   E  +  F  M        
Sbjct: 226 ------------------------NEVSWNALIAGFARKADGETTLMKFAEMQRNGFGAT 261

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
             T   + SA   +GAL+  +W++A++ K+G      +   ++ M+A+ G    A +VF 
Sbjct: 262 HFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFD 321

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
           RM+KRD+  W   + A+A  G G++AV  F E+ + GI+ + I F+ VLTACSHGGLV +
Sbjct: 322 RMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKE 381

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
           G H F  M D + V P+I HY   VDLLGRAGLL EAL  +  MP+EP   +WG+LL AC
Sbjct: 382 GKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGAC 440

Query: 652 QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
           + H+N  +  YAA+ + ELDP+ +G  VLL NIYAS GKW + ARVR  MK  G++K P 
Sbjct: 441 RMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPA 500

Query: 712 SSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
            S +++   VH F + D++HP+  +I  M  E+N R++ AGYVP+  +VLL ++EQE++ 
Sbjct: 501 CSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERET 560

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
            L +HSEK+A+AF LI+      IR++KN+R+C DCHS  K VSKV+ REI+VRD NRFH
Sbjct: 561 KLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFH 620

Query: 832 FFRQGSCSCSDFW 844
            F +GSCSC D+W
Sbjct: 621 HFSEGSCSCGDYW 633



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 199/447 (44%), Gaps = 35/447 (7%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P    +  ++ AC +         +H  + +     D F+ N LI+ Y +CG + D R
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            VFD+M  R+VVSWT LI   A+  +P EA+ L  +M+    +PN  T   ++ A     
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
              +G+++ A   +     +  + +AL+DMY +C  +D A  +F     +N V  N +++
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            + R       L    EM  +G      T  S  SA A++G L  GR  H +++++G + 
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + NTM+ MY K G    A ++FD M  + +V+WN                       
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWN----------------------- 332

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                   TML  L Q  + +EA+  F  +    I+++++T + V +AC + G +   K 
Sbjct: 333 --------TMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKH 384

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEG 552
            +  ++   +  ++    + VD+  R G  + A+    +M     +A W A +GA  M  
Sbjct: 385 YFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHK 444

Query: 553 N---GEQAVELFNEMLRQGIKPDSIVF 576
           N   G+ A +   E+      P  +++
Sbjct: 445 NAKMGQYAADHVFELDPDDTGPPVLLY 471



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 9/328 (2%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           ++ D   S  +  +  LI GY+   +  EAI L  ++      P+ FTF  +L A     
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G Q+H   VK  +D DV+V + L++ Y  C  +     VFD +  +N VSW +LI 
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             AR+   +  +  F EM   G      T   + SA A++  LE G  V A++ + G K 
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
            A + N ++ MY K G++  A+++F     R+LV  NT+++   + GL +EA+A  +E+ 
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIR 355

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGR----MCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             G + +++T LS ++A +  G +  G+    M   Y ++  ++ + S     +D+  + 
Sbjct: 356 KCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSF----VDLLGRA 411

Query: 389 G-KQEMACRIFDHMSNKTVVSWNSLIAG 415
           G  +E    +F      T   W +L+  
Sbjct: 412 GLLKEALIFVFKMPMEPTAAVWGALLGA 439


>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/576 (40%), Positives = 345/576 (59%), Gaps = 1/576 (0%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G   +  MV  L+    KC A+D A ++F    + N+ L   ++  +V  G   EA+ + 
Sbjct: 76  GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLY 135

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             ML     PD   M S + A      L  GR  H   L+ G      +   ++++Y KC
Sbjct: 136 SRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKC 195

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G+   A R+F+ M    V S   +I+     G VE A  VFS +  +D + W  M+ G  
Sbjct: 196 GELGDARRVFEEMPEDVVAS-TVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFV 254

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
           +      A+E FR M  E ++ +  T+V V SAC  LGAL++ +W+++Y+ K  I  ++ 
Sbjct: 255 RNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLF 314

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           +  AL++M++RCG    A  VF  M+ RDV  +   I  ++M G   QA+ELF  M+ + 
Sbjct: 315 VGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRR 374

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
           ++P ++ FVGVL ACSHGGLV+ G+ +F SM   + V PQI HYGCMVDLLGR G L EA
Sbjct: 375 LRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEA 434

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
            DLI++M + P+ ++ G+LL+AC+ H+N+++    A+ + +     SG +VLLS++YAS+
Sbjct: 435 YDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASS 494

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
           GKW   A+VR +MKE G++K PG SSIEVN ++HEF  GD  HP+   I   L E+N  L
Sbjct: 495 GKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLL 554

Query: 749 RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
           R  GY P+   VL D+++ EK++ L+ HSE+LA+ +GLIST     IRV+KNLR+C DCH
Sbjct: 555 RLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCH 614

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S  KL++K+  R+I+VRD NRFH+F  G+CSC D+W
Sbjct: 615 SAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 220/464 (47%), Gaps = 49/464 (10%)

Query: 9   PLVLATPTVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHCHILKQGLGHKPSYI 67
           P    +P     +N +       D   I SL +  + +N++   H  +++ G    P  +
Sbjct: 25  PFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMV 84

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
            +++ +C++     ++ YA + F Y    N     +++Y +LI G+   G  +EAI LY 
Sbjct: 85  FELLRSCSKC---HAIDYASRIFQYTHNPN-----VYLYTALIDGFVSSGNYLEAIQLYS 136

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +    ILPD +    +L AC    A  EG +VH   +K+GF  +  V   ++  YG+CG
Sbjct: 137 RMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCG 196

Query: 188 DIVDGRRVFDEMSE------------------------------RNVVSWTSLICACARR 217
           ++ D RRVF+EM E                              ++ V WT++I    R 
Sbjct: 197 ELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRN 256

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           +    A+  F  M  E ++PN  T+VCV+SAC++L  LE+G  V +Y+ +  ++ N  + 
Sbjct: 257 EETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVG 316

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           NAL++MY +CG++D A+ +F E KDR+++  NT++S     G +R+A+ +   M+    R
Sbjct: 317 NALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLR 376

Query: 338 PDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           P  VT +  ++A +  G +  G      M   Y +   +E +      M+D+  + G+ E
Sbjct: 377 PTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHY----GCMVDLLGRVGRLE 432

Query: 393 MACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            A  +   M      +   +L++    + ++E   +V  E+  R
Sbjct: 433 EAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDR 476



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 205/467 (43%), Gaps = 66/467 (14%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +++   +S    + + +H  +++ G  +D F+   L+    +C  I    R+F      N
Sbjct: 52  IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 111

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V  +T+LI          EA+ L+  M+ E I P++  M  ++ AC     L  G  V +
Sbjct: 112 VYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHS 171

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              +LG  +N L+   ++++Y KCG +  A+++F E  + ++V    ++S+Y   GL  E
Sbjct: 172 RALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEE 230

Query: 324 ALAILDE-------------------------------MLLHGPRPDRVTMLSAVSASAQ 352
           A A+                                  M     RP+  T++  +SA +Q
Sbjct: 231 AGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQ 290

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           LG L  GR  H Y+ +  +E    + N +I+MY +CG  + A  +FD M ++ V+++N++
Sbjct: 291 LGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTM 350

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I+GL  NG    A                               +ELFRVM+  R++   
Sbjct: 351 ISGLSMNGKSRQA-------------------------------IELFRVMVGRRLRPTN 379

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           VT VGV +AC + G +D    I+  + ++  +   ++    +VD+  R G  + A  + R
Sbjct: 380 VTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIR 439

Query: 532 RME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            M+   D       + A  M  N E   ++  E+  +G + DS  +V
Sbjct: 440 TMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRG-QADSGTYV 485



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 5/179 (2%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+A + +NG   D  +   L+   ++C     A ++F+     +V  +TA I      GN
Sbjct: 68  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
             +A++L++ ML + I PD+ +   +L AC     + +G  +      +   S ++V   
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 187

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN-VDIAAYAAERITELD 671
            M +L G+ G LG+A  + + M   P DV+  +++ +    Q  V+ A     R+   D
Sbjct: 188 IM-ELYGKCGELGDARRVFEEM---PEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKD 242


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/625 (35%), Positives = 365/625 (58%), Gaps = 32/625 (5%)

Query: 221 KEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
           ++++ +F +MV   G + +  T++ V+ A A+LQ L+LG ++     + G  ++  ++  
Sbjct: 12  EDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTG 71

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+ ++ KCG V+ A+ LFGE + ++L+ CN ++S +   G   +++ +  E+L  G R  
Sbjct: 72  LISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVS 131

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T++  +   +  G        HG+ ++ G+    S+   +  +Y         CR+  
Sbjct: 132 SSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVY---------CRL-- 180

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                     N +I           AR++F E   +   SWN M+ G TQ  + + A+ L
Sbjct: 181 ----------NEMIF----------ARQLFDESAEKTLASWNAMISGCTQNGLTDAAISL 220

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F+ M    +  + VT+  + SAC  +GAL L +W+++ I+ N    ++ ++TAL+DM+A+
Sbjct: 221 FQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAK 280

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG    A ++F  M +++   W A I    + G+G++A++LF +ML   +KP  + F+ V
Sbjct: 281 CGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSV 340

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L ACSH GLV +G  +F +M    G  P   HY CMVD+LGRAG L +AL+ IK+MPVEP
Sbjct: 341 LYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEP 400

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
              +WG+LL AC  H++ ++A  A+E++ ELDPE  G +VL+SNIY+   K+   A VR 
Sbjct: 401 GPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQ 460

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
             K++ + K PG + IE+    H FTSGD+SHP+   I + L ++  ++ +AG+  + T 
Sbjct: 461 VAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTT 520

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           VL D++E+EK+  +  HSEKLA+AFGLIST     IR++KNLR+C DCH++ K +SK+  
Sbjct: 521 VLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITK 580

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           R I+VRD NRFH F+ G CSC D+W
Sbjct: 581 RVIVVRDANRFHHFKDGLCSCGDYW 605



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 192/419 (45%), Gaps = 33/419 (7%)

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G   D  T   VL A  +      G+Q+    +K GF   V +   LI+ + +CG++ 
Sbjct: 24  GNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVE 83

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
             R +F E+ +++++S  ++I         +++V LF E++  G + +S T+V +I   +
Sbjct: 84  IARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYS 143

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
              +  L + +  +  +LG+ +++ +  AL  +Y +   +  A+QLF E  ++ L   N 
Sbjct: 144 PFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNA 203

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++S   + GL   A+++   M  +   P+ VT+ S +SA AQ+G L  G   H  +  N 
Sbjct: 204 MISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNR 263

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
            E    +   +IDMY KCG   +A  +FD M  K  V+WN++I+G   +G          
Sbjct: 264 FESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHG-------- 315

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                                  +EA++LF  MLS  +K   +T + V  AC + G +  
Sbjct: 316 -----------------------QEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKE 352

Query: 491 AKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              I+   +   G     +    +VD+  R G  ++A++  + M  +     W A +GA
Sbjct: 353 GDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGA 411



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 173/372 (46%), Gaps = 28/372 (7%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ---VHGA 163
           N++I G++C G   +++ L+ EL   G   ++ +   ++      S FG       +HG 
Sbjct: 101 NAMISGFTCNGETEDSVRLFKELLSSG---ERVSSSTIVGLIPVYSPFGHSYLCNCIHGF 157

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
            VK+G      V   L   Y    +++  R++FDE +E+ + SW ++I  C +  L   A
Sbjct: 158 CVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAA 217

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + LF  M +  + PN VT+  ++SACA++  L LG+ V + I     ++N  +  AL+DM
Sbjct: 218 ISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDM 277

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG++  A++LF    ++N V  N ++S Y   G  +EAL +  +ML    +P  +T 
Sbjct: 278 YAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTF 337

Query: 344 LSAVSASAQLGDLLCGR-MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           LS + A +  G +  G  + H  V   G E        M+D+  + G+ + A        
Sbjct: 338 LSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALE------ 391

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL--F 460
                         IK   VE    V+  + G   I  +T L  +  E +FE   E   +
Sbjct: 392 -------------FIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGY 438

Query: 461 RVMLSERIKVDR 472
            V++S    V+R
Sbjct: 439 YVLMSNIYSVER 450



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 1/208 (0%)

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F   + D     TL  +N++I G +  GL   AISL+  +    + P+  T   +L+AC 
Sbjct: 185 FARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACA 244

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
           +  A   G  VH  I    F+ +V+V   LI+ Y +CG I   R +FD M E+N V+W +
Sbjct: 245 QIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNA 304

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDEL 268
           +I         +EA+ LF++M+   +KP  +T + V+ AC+    ++ GD +    + + 
Sbjct: 305 MISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDF 364

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQL 296
           G +  A     +VD+  + G +  A + 
Sbjct: 365 GFEPLAEHYACMVDILGRAGQLKKALEF 392


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/764 (32%), Positives = 400/764 (52%), Gaps = 45/764 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  AQ  F      N T+ T+ M     R ++  G   +A+SL+  + G G++PD+ T  
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMM-----RAHAAAGRTSDALSLFRAMLGEGVIPDRVTVT 144

Query: 143 FVLN--ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
            VLN   CT  S       +H   +K G D  VFV N L++ Y + G +   RRVF EM 
Sbjct: 145 TVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH 197

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +++ V++ +++  C++  L  +A+ LF  M   GI     T   +++  A + +L LG +
Sbjct: 198 DKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQ 257

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V A +       N  + N+L+D Y KC  +D  ++LF E  +R+ V  N I++ Y     
Sbjct: 258 VHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC 317

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           A   L +  EM   G     +   + +S +  L D+  G+  H  ++  GL   D + N 
Sbjct: 318 AATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA 377

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMY KCG                                +++A+  FS    +  ISW
Sbjct: 378 LIDMYSKCGM-------------------------------LDAAKSNFSNRSEKSAISW 406

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
             ++ G  Q    EEA++LF  M    ++ DR T   +  A   L  + L + +++Y+ +
Sbjct: 407 TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 466

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           +G    +   + LVDM+A+CG    A++ F  M +R+  +W A I A A  G  + A+++
Sbjct: 467 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 526

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F  ML  G  PDS+ F+ VL ACSH GL ++    F  M   + +SP   HY C++D LG
Sbjct: 527 FEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 586

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           R G   +   ++  MP + + +IW S+L +C+ H N ++A  AA+++  ++P  +  +V+
Sbjct: 587 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVI 646

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSNIYA AG+W + A V+  M+++G+RK  G S +E+  K++ F S D + P ++ I   
Sbjct: 647 LSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDE 706

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L  +   +   GY PD+T  L  VD + K   L +HSE+LA+AF L++T    PIR++KN
Sbjct: 707 LDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKN 766

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L  C DCH+  K++SK+ +R+IIVRD+ RFH F+ G CSC D+W
Sbjct: 767 LTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/389 (21%), Positives = 164/389 (42%), Gaps = 39/389 (10%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           R  A  D++  K N   +N ++  Y   G +  A+ LF     RN      +M  +   G
Sbjct: 61  RARAMFDQMPHK-NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAG 119

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              +AL++   ML  G  PDRVT+ + ++        L     H + ++ GL+    +CN
Sbjct: 120 RTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL-----HPFAIKFGLDTHVFVCN 174

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           T++D Y                                K+G + +AR VF EM  +D ++
Sbjct: 175 TLLDAY-------------------------------CKHGLLAAARRVFLEMHDKDAVT 203

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           +N M+ G ++E +  +A++LF  M    I     T   + +    +  L L   ++A + 
Sbjct: 204 YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVL 263

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           ++    ++ +  +L+D +++C       ++F  M +RD  ++   I A A        + 
Sbjct: 264 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 323

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF EM + G     + +  +L+       V+ G  +   +  + G++ + +    ++D+ 
Sbjct: 324 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV-LLGLASEDLLGNALIDMY 382

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
            + G+L  A     +   E + + W +L+
Sbjct: 383 SKCGMLDAAKSNFSNRS-EKSAISWTALI 410


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/631 (38%), Positives = 364/631 (57%), Gaps = 38/631 (6%)

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           C + DL + A+     M   G+  +++T   +I  C+    ++ G RV  +I   G +  
Sbjct: 31  CHQWDLHR-AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +VN L++MY+K   ++ A+ LF E  +RN+V   T++S Y    L  +AL  L  M  
Sbjct: 90  MFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSN-KLNDKALKCLILMFR 148

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G RP+  T  S + A   L +L   R  H  +++ GLE    + + +ID+Y K      
Sbjct: 149 EGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSK------ 199

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                          W+          D+++A  VF EMP RD + WN+++GG  Q +  
Sbjct: 200 ---------------WS----------DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDG 234

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
            EA+ LF+ M       D+ T+  V  AC  L  L+L + ++ ++ K     D+ L  AL
Sbjct: 235 NEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNAL 292

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +DM+ +CG  + A   F RM ++DV +W+  +  +A  G   QA+ELF  M   G +P+ 
Sbjct: 293 IDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNY 352

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I  +GVL ACSH GLV +GW+ FRSM  + GV P   HYGC++DLLGRAG L EA+ LI 
Sbjct: 353 ITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIH 412

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
            M  EP+ V W +LL AC+ H+NVD+A YAA++I EL+PE +G ++LLSNIYA+  +W +
Sbjct: 413 EMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWED 472

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           VA VR  M  +GIRK PG S IEV+ ++H F  GD SHP++  I   L ++  R+   GY
Sbjct: 473 VAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGY 532

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VPD   VL D++ ++K+  L +HSEKLA+ FGL++ S+   +R+ KNLR+C DCH FAK+
Sbjct: 533 VPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKV 592

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VS++  R I++RD  R+H F+ G CSC D+W
Sbjct: 593 VSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 198/430 (46%), Gaps = 39/430 (9%)

Query: 6   NPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL-------------KQPH 52
           +PSPLV          + H+A          G   +  T +EL             K+ H
Sbjct: 19  DPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVH 78

Query: 53  CHILKQGLGHKPSYISKVVCTCAQMGT-FESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
            HI  +G  ++P     VV T   M   F  L  A+  FD   + N  S T     ++I 
Sbjct: 79  EHIFCKG--YEPKMF--VVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWT-----TMIS 129

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
            YS   L  +A+   + +   G+ P+ FT+  VL AC          Q+H  I+K G + 
Sbjct: 130 AYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRAC---DGLPNLRQLHCGIIKTGLES 185

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           DVFV + LI+ Y +  D+ +   VFDEM  R++V W S+I   A+     EA+ LF  M 
Sbjct: 186 DVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMK 245

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
             G   +  T+  V+ AC  L  LELG +V  ++  L    + ++ NAL+DMY KCG+++
Sbjct: 246 RAGFLADQATLTSVLRACTGLALLELGRQVHVHV--LKFDQDLILNNALIDMYCKCGSLE 303

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A   F    +++++  +T+++   + G +R+AL + + M   G RP+ +T+L  + A +
Sbjct: 304 DANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACS 363

Query: 352 QLGDLLCGRMCHGYVLRN-----GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKT 405
             G +  G     Y  R+     G++        +ID+  + G+ + A ++   M     
Sbjct: 364 HAGLVEKG----WYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPD 419

Query: 406 VVSWNSLIAG 415
            V+W +L+  
Sbjct: 420 SVTWRTLLGA 429


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/692 (36%), Positives = 379/692 (54%), Gaps = 37/692 (5%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++H  I     DR+ F+ N L++ Y + G +   +  F  ++  N  SW  L+ A A+  
Sbjct: 53  KLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNG 112

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
            P+ A  LF  M  +G++PN+VT+   + AC   +NL LG ++   I    ++ ++ + +
Sbjct: 113 HPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVES 172

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L+ MY +C  ++ A++ F    ++++V    ++S Y        AL ++  M L G + 
Sbjct: 173 SLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKL 232

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI-CNTMIDMYMKCGKQEMACRI 397
              T +S + A A   DL  G   H      GL+   ++   T++++Y KCG+       
Sbjct: 233 GLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGR------- 285

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                   V+ AR V   MP R  +SW  M+    Q     EA+
Sbjct: 286 ------------------------VDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAI 321

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDM 516
            LF+ M  E  +   +T++ V  +C  LG L L K I+A I  +      + L  A++ M
Sbjct: 322 NLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITM 381

Query: 517 FARCGDPQRAMQVFR--RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDS 573
           + +CG+ + A +VF    +  R V  WTA I A A  G GE+A+ELF EML  G  +P+ 
Sbjct: 382 YGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNR 441

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI- 632
           + F+ VL ACSH G + Q W  F SM    GV P   HY C+VDLLGRAG LGEA  L+ 
Sbjct: 442 VTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLL 501

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           +    E + V W + L+ACQ + +++ +  AA+R++EL+PE     VLLSN+YA+ G+  
Sbjct: 502 RHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRA 561

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
           +VAR+R +MK  G++K  G S IE+N +VHEF   D SHP    I S L  ++  +++AG
Sbjct: 562 DVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAG 621

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           YVPD   VL DVDE++K  LL +HSE+LAMA G+IST     +RVVKNLR+C DCH+  K
Sbjct: 622 YVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATK 681

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S++  R+IIVRD +RFH F+ G CSC D+W
Sbjct: 682 FISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 240/527 (45%), Gaps = 47/527 (8%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L  C+ L+E+++ H  I  + L       + +V   ++ G   SL  AQ AF      N 
Sbjct: 42  LWQCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHG---SLHGAQLAFGRITLHNA 98

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            S     +N L+  Y+  G    A +L+  +   G+ P+  T    L ACT +     G 
Sbjct: 99  HS-----WNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGR 153

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           +++  I     + D  VE+ LI  YG C +I +  R FD   E++VV WT++I A A   
Sbjct: 154 KLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNW 213

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM-KANALMV 277
               A+ L   M  EGIK    T V ++ ACA   +L  G         +G+ +++ ++ 
Sbjct: 214 RTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVA 273

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
             LV++Y KCG VD A+++      R  V    +++ Y + G A EA+ +   M L G  
Sbjct: 274 GTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAE 333

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS--ICNTMIDMYMKCGKQEMAC 395
           P  +T++S V + A LG L  G+  H  + R+      S  + N +I MY KCG  E+A 
Sbjct: 334 PSDITLISVVDSCAVLGTLSLGKRIHARI-RSSPSFSQSLMLLNAVITMYGKCGNLELAR 392

Query: 396 RIFD--HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
            +F+   +  ++VV+W ++I    +NG  E A E+F EM          ++ G T+ N  
Sbjct: 393 EVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEM----------LIDGGTEPN-- 440

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATA 512
                             RVT + V  AC +LG L+ A   +  +  + G+         
Sbjct: 441 ------------------RVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCC 482

Query: 513 LVDMFARCGDPQRAMQVFRRME--KRDVSAWTAAIGAMAMEGNGEQA 557
           LVD+  R G    A ++  R +  + DV  W A + A  M G+ E++
Sbjct: 483 LVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERS 529



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 35/245 (14%)

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           LD  + ++A I    +  +  L   LVD +++ G    A   F R+   +  +W   + A
Sbjct: 48  LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAA 107

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH------GGLVNQ---------G 592
            A  G+   A  LF+ M  QG++P+++     L AC+       G  +N+          
Sbjct: 108 YAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEID 167

Query: 593 WHLFRSMTDIHG-------------VSPQ--IVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            H+  S+  ++G              SP+  +V +  M+           AL+L++ M +
Sbjct: 168 SHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDL 227

Query: 638 EPNDV---IWGSLLAACQKHQNV--DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           E   +    + SLL AC    ++   +A +       LD   + V   L N+Y   G+  
Sbjct: 228 EGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVD 287

Query: 693 NVARV 697
           +  RV
Sbjct: 288 DARRV 292


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 256/743 (34%), Positives = 404/743 (54%), Gaps = 36/743 (4%)

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F++N +IRG++  GL   A++ Y  +   G  PD+FTFP V+  C +     EG   HG 
Sbjct: 73  FLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGM 132

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K+G + DV+  N L+ FY + G + D  RVFD M  R++V+W  ++       L   A
Sbjct: 133 VIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLA 192

Query: 224 VYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           +  F EM +   ++ +SV ++  ++AC    +   G  +  Y+   G++ +  +  +L+D
Sbjct: 193 LACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLD 252

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCG V  A+ +F     R +V  N ++  Y       EA     +M   G + + VT
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            ++ ++A AQ    L GR  HGYV+R        +   +++MY K GK E + +IF  ++
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           NKT+VSWN++IA  +                                + M+ EA+ LF  
Sbjct: 373 NKTLVSWNNMIAAYM-------------------------------YKEMYTEAITLFLE 401

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           +L++ +  D  TM  V  A   LG+L   + I++YI   G   +  +  A++ M+AR GD
Sbjct: 402 LLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGD 461

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              + ++F +M  +DV +W   I   A+ G G+ A+E+F+EM   G++P+   FV VLTA
Sbjct: 462 VVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTA 521

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS  GLV++GW  F  M   +G+ PQI HYGCM DLLGR G L E L  I+SMP++P   
Sbjct: 522 CSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSR 581

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WGSLL A +   ++DIA YAAERI +L+ + +G +++LS++YA AG+W +V RVRL MK
Sbjct: 582 VWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMK 641

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
           E+G+R+    S +E++     F +GD SH +   I  +   ++ ++++     D  N   
Sbjct: 642 EKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKETD---DTRNQSY 698

Query: 763 DVDEQEKKYLLSH-HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            V    +   + + HS +LA+ FGLIS+    PI V KN+R+C  CH   KL+S+   R 
Sbjct: 699 PVPVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRR 758

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+V D+  +H F  GSC C D+W
Sbjct: 759 IVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 235/493 (47%), Gaps = 45/493 (9%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD-YYIKDNETSATL 103
           L+E +  H  ++K GL H     + +V   A++G  E    A++ FD   ++D      +
Sbjct: 123 LDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVED---AERVFDGMPVRD------I 173

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
             +N ++ GY   GLG  A++ + E+     +  D       L AC    +  +G ++HG
Sbjct: 174 VTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHG 233

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ G ++D+ V   L++ Y +CG++   R VF  M  R VV+W  +I   A  + P E
Sbjct: 234 YVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A   F +M  EG++   VT + +++ACA+ ++   G  V  Y+       + ++  AL++
Sbjct: 294 AFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLE 353

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K G V++++++FG+  ++ LV  N +++ Y+   +  EA+ +  E+L     PD  T
Sbjct: 354 MYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFT 413

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M + V A   LG L   R  H Y++  G      I N ++ MY + G    +  IFD M 
Sbjct: 414 MSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMV 473

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           +K V+SWN++I G   +G  ++A E+F EM       +N +                   
Sbjct: 474 SKDVISWNTMIMGYAIHGQGKTALEMFDEM------KYNGL------------------- 508

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIY--AYIEKNGIHCDMQLATALVDMFARC 520
                 + +  T V V +AC   G +D   W++    +++ G+   ++    + D+  R 
Sbjct: 509 ------QPNESTFVSVLTACSVSGLVD-EGWMHFNLMLQEYGMIPQIEHYGCMTDLLGRE 561

Query: 521 GDPQRAMQVFRRM 533
           GD +  +Q    M
Sbjct: 562 GDLREVLQFIESM 574



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 167/368 (45%), Gaps = 42/368 (11%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +D A +     +  +  L N ++  +   GL   ALA    ML  G RPDR T    V
Sbjct: 55  GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
              A+LG L  GR  HG V++ GLE     CN+++  Y K G  E A R+FD M  + +V
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           +WN ++ G + NG    A   F EM                      +A+E         
Sbjct: 175 TWNIMVDGYVSNGLGSLALACFQEM---------------------HDALE--------- 204

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           ++ D V ++   +AC    +    K I+ Y+ ++G+  D+++ T+L+DM+ +CG+   A 
Sbjct: 205 VQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYAR 264

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG- 586
            VF  M  R V  W   IG  A+    ++A + F +M  +G++ + +  + +L AC+   
Sbjct: 265 SVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTE 324

Query: 587 ----GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
               G    G+ + R         P +V    ++++ G+ G + E+ + I         V
Sbjct: 325 SSLYGRSVHGYVVRRQFL------PHVVLETALLEMYGKVGKV-ESSEKIFGKIANKTLV 377

Query: 643 IWGSLLAA 650
            W +++AA
Sbjct: 378 SWNNMIAA 385



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 3/254 (1%)

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           S  SL+  L   G ++ A E  + + G D    N M+ G     +   A+  +R ML + 
Sbjct: 43  SSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDG 102

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
            + DR T   V   C  LG LD  +  +  + K G+  D+    +LV  +A+ G  + A 
Sbjct: 103 ARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAE 162

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ-GIKPDSIVFVGVLTACSHG 586
           +VF  M  RD+  W   +      G G  A+  F EM     ++ DS+  +  L AC   
Sbjct: 163 RVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLE 222

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
               QG  +   +   HG+   I     ++D+  + G +  A  +  +MP+    V W  
Sbjct: 223 FSSMQGKEIHGYVIR-HGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR-TVVTWNC 280

Query: 647 LLAACQKHQNVDIA 660
           ++     ++  D A
Sbjct: 281 MIGGYALNERPDEA 294


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/677 (38%), Positives = 374/677 (55%), Gaps = 69/677 (10%)

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R+  SW   + +  R +  +EA+  + EM   G +P++     V+ A + LQ+L+ G+++
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 262 CAYIDELGMKANALMV-NALVDMYMKCGA--------------------VDTAKQLFGEC 300
            A   + G  ++++ V N LV+MY KCG                     VD +K LF   
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            DR++V  NT++S++ +     EALA    M+L G   D VT+ S + A + L  L  G+
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234

Query: 361 MCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
             H YVLRN  L     + + ++DMY  C +                             
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQ----------------------------- 265

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-----DRVT 474
             VES R VF  + GR    WN M+ G  +  + E+A+ LF     E IKV     +  T
Sbjct: 266 --VESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF----IEMIKVAGLLPNTTT 319

Query: 475 MVGVASACGY-LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           M  V  AC + L A+   K I+AY  +N +  D+ + +ALVDM+A+CG    + +VF  M
Sbjct: 320 MASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEM 379

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-----IKPDSIVFVGVLTACSHGGL 588
             ++V  W   I A  M G GE+A+ELF  M+ +       KP+ + F+ V  ACSH GL
Sbjct: 380 PNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGL 439

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV-IWGSL 647
           +++G +LF  M   HGV P   HY C+VDLLGRAG L EA +L+ +MP E + V  W SL
Sbjct: 440 ISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSL 499

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC+ HQNV++   AA+ +  L+P  +  +VLLSNIY+SAG W     VR  M++ G++
Sbjct: 500 LGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVK 559

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K PG S IE   +VH+F +GD SHP+   +   L  ++ ++R  GYVPD + VL +VDE 
Sbjct: 560 KEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDED 619

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+ LL  HSEKLA+AFG+++T     IRV KNLR+C DCH+  K +SK+ +REIIVRD 
Sbjct: 620 EKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDV 679

Query: 828 NRFHFFRQGSCSCSDFW 844
            RFH F++G+CSC D+W
Sbjct: 680 RRFHHFKEGTCSCGDYW 696



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 223/467 (47%), Gaps = 63/467 (13%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCL 179
           EAIS Y+E+   G  PD F FP VL A +       G Q+H A VK G+    V V N L
Sbjct: 75  EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTL 134

Query: 180 INFYGECGDIVD--------------------GRRVFDEMSERNVVSWTSLICACARRDL 219
           +N YG+CG I D                     + +F+   +R++VSW ++I + ++ D 
Sbjct: 135 VNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDR 194

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVN 278
             EA+  F  MV EG++ + VT+  V+ AC+ L+ L++G  + AY+     +  N+ + +
Sbjct: 195 FSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGS 254

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML-LHGPR 337
           ALVDMY  C  V++ +++F     R + L N ++S Y R GL  +AL +  EM+ + G  
Sbjct: 255 ALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLL 314

Query: 338 PDRVTMLSAVSASAQ-LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           P+  TM S + A    L  +  G+  H Y +RN L    ++ + ++DMY KCG   ++ R
Sbjct: 315 PNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRR 374

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F+ M NK V++WN LI     +G  E                               EA
Sbjct: 375 VFNEMPNKNVITWNVLIMACGMHGKGE-------------------------------EA 403

Query: 457 MELFRVMLSE-----RIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLA 510
           +ELF+ M++E       K + VT + V +AC + G +       Y     +G+       
Sbjct: 404 LELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHY 463

Query: 511 TALVDMFARCGDPQRAMQVFRRM--EKRDVSAWTAAIGAMAMEGNGE 555
             +VD+  R G  + A ++   M  E   V AW++ +GA  +  N E
Sbjct: 464 ACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVE 510



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 183/380 (48%), Gaps = 27/380 (7%)

Query: 59  GLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGL 118
           G+G K    + ++   A++G  +    ++  F+ ++  +  S     +N++I  +S    
Sbjct: 143 GIGDKTFTNNALMAMYAKLGRVDD---SKALFESFVDRDMVS-----WNTMISSFSQSDR 194

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG-FDRDVFVEN 177
             EA++ +  +   G+  D  T   VL AC+       G ++H  +++      + FV +
Sbjct: 195 FSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGS 254

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIK 236
            L++ Y  C  +  GRRVFD +  R +  W ++I   AR  L ++A+ LF EM++  G+ 
Sbjct: 255 ALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLL 314

Query: 237 PNSVTMVCVISACA-KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           PN+ TM  V+ AC   L  +  G  + AY     + ++  + +ALVDMY KCG ++ +++
Sbjct: 315 PNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRR 374

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR-----PDRVTMLSAVSAS 350
           +F E  ++N++  N ++      G   EAL +   M+    R     P+ VT ++  +A 
Sbjct: 375 VFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 434

Query: 351 AQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK- 404
           +  G +  G     RM H +    G+E        ++D+  + G+ E A  + + M  + 
Sbjct: 435 SHSGLISEGLNLFYRMKHDH----GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEF 490

Query: 405 -TVVSWNSLIAGLIKNGDVE 423
             V +W+SL+     + +VE
Sbjct: 491 DKVGAWSSLLGACRIHQNVE 510



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 25/176 (14%)

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           P R   SW   L   T+ N F EA+  +  M     + D      V  A   L  L   +
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 493 WIYAYIEKNGI-HCDMQLATALVDMFARCG----------------------DPQRAMQV 529
            I+A   K G     + +A  LV+M+ +CG                      D  +A+  
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKAL-- 170

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           F     RD+ +W   I + +      +A+  F  M+ +G++ D +    VL ACSH
Sbjct: 171 FESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 226


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/741 (33%), Positives = 394/741 (53%), Gaps = 67/741 (9%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P+ F +  ++N   K         V   I +     ++F  N L++ Y + G + D +RV
Sbjct: 38  PETFLYNNLINTYGKLGDLKNARNVFDHIPQ----PNLFSWNTLLSAYSKLGYLQDMQRV 93

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQN 254
           FD M   +VVSW SL+   A   L  E+V ++  M+++G +  N +T   ++   +    
Sbjct: 94  FDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGF 153

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           ++LG ++   I + G ++   + + LVDMY K G ++ A ++F E  ++N+V+ NT+++ 
Sbjct: 154 VDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITG 213

Query: 315 YVRL-------------------------------GLAREALAILDEMLLHGPRPDRVTM 343
            +R                                GL +EA+    EM + G   D+ T 
Sbjct: 214 LLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTF 273

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            S ++A      L  G+  H Y++R   +    + + ++DMY KC               
Sbjct: 274 GSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCR-------------- 319

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                            +V+ A  VF +M  ++ ISW  ML G  Q    EEA+ +F  M
Sbjct: 320 -----------------NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDM 362

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
               I  D  T+  V S+C  L +L+     +     +G+ C + ++ AL+ ++ +CG  
Sbjct: 363 QRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSL 422

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           + A Q+F  M+ RD  +WTA +   A  G   + + LF  ML  GI PD + FVGVL+AC
Sbjct: 423 EHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSAC 482

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           S  GLV +G+H F  M   H ++P   HY CM+DLL RAG L EA + I  MP  P+ + 
Sbjct: 483 SRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIG 542

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           W +LL++C+ + N++I  +AAE + +L+P+    ++LLS+IYA+ GKW +VA++R  M+E
Sbjct: 543 WATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMRE 602

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
            G++K PG S I+   KVH F++ D S P  + I + L  +  ++ + GYVPD++ VL D
Sbjct: 603 MGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHD 662

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           V++ EK  +L+HHSEKLA+AFGL+     + IRVVKNLR+C DCH+  K +S++  REI+
Sbjct: 663 VEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREIL 722

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD  RFH F+ G CSC DFW
Sbjct: 723 VRDAVRFHLFKDGVCSCGDFW 743



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 156/615 (25%), Positives = 262/615 (42%), Gaps = 108/615 (17%)

Query: 37  GSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
            +LK C   +   ++K+ HC I++     +    + ++ T  ++G    L  A+  FD+ 
Sbjct: 10  AALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLG---DLKNARNVFDHI 66

Query: 94  IKDNETSATLFM--------------------------YNSLIRGYSCIGLGVEAISLY- 126
            + N  S    +                          +NSL+ GY+  GL  E++ +Y 
Sbjct: 67  PQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYN 126

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
           + L    +  ++ TF  +L   +       G Q+HG I K G+   +FV + L++ Y + 
Sbjct: 127 MMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT 186

Query: 187 GDIVDGRRVFDEMSERNVV-------------------------------SWTSLICACA 215
           G I D  R+F+E+ E+N+V                               SWT++I    
Sbjct: 187 GFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLT 246

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +  L KEAV  F EM  EG   +  T   V++AC     L+ G ++ AYI     + N  
Sbjct: 247 QNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIF 306

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + +AL+DMY KC  V  A+ +F + + +N++    ++  Y + G + EA+ I  +M  + 
Sbjct: 307 VGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
             PD  T+ S +S+ A L  L  G   HG  L +GL  + ++ N +I +Y KCG  E A 
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAH 426

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           ++F  M  +  VSW +L++G  + G                                  E
Sbjct: 427 QLFHEMKIRDEVSWTALVSGYAQFGKA-------------------------------NE 455

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE----KNGIHCDMQLAT 511
            + LF  ML+  I  D VT VGV SAC   G ++     Y Y E    ++ I       T
Sbjct: 456 TISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKG---YHYFECMVKEHRITPIPDHYT 512

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEMLRQ 567
            ++D+ +R G  + A     +M    D   W   + +  + GN   G+ A E  +++  Q
Sbjct: 513 CMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQ 572

Query: 568 GIKPDSIVFVGVLTA 582
              P S + +  + A
Sbjct: 573 --NPASYILLSSIYA 585


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/772 (32%), Positives = 415/772 (53%), Gaps = 49/772 (6%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  L+ A++ FD  ++    S T+     LI GY       EA  LY ++   GI PD  
Sbjct: 87  FGKLSKARELFDGMVERTAVSWTI-----LIGGYLQSNQSKEAFRLYADMRRGGIEPDYV 141

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L+   +       VQ+H  ++K+G++ ++ V N L++ Y +   +    ++F  M
Sbjct: 142 TLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM 201

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             ++ V++ SL+   +   L +EA+ LF E+   GIKP+  T   ++SA   L + + G 
Sbjct: 202 LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQ 261

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           +V  ++ +     N  + NAL+D Y K   VD   +LF E  + + +  N ++++Y   G
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNG 321

Query: 320 LAREALAILDEMLLHGPRPDR-----VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
             +E+  +  +  L   R DR      T+LS  ++S    +L  GR  H   +  G    
Sbjct: 322 QFKESFDLFRK--LQFTRFDRRQFPFATLLSIATSSL---NLRMGRQIHCQAITVGANFE 376

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N ++DMY KC   + A +IFD+++ K+                             
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKST---------------------------- 408

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
              + W  M+    Q+   EE + +F  M    +  D+ T   +  AC  L ++ L + +
Sbjct: 409 ---VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           ++ + ++G   ++   +AL+D +A+CG    A++ F  M +R+  +W A I A A  GN 
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVHYG 613
           +  +  F +M++ G KPDS+ F+ VL+ACSH G V +  WH F SMT I+ V+P+  HY 
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH-FNSMTQIYEVTPKREHYT 584

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL-DP 672
            MVD+L R G   EA  L+  MP EP++++W S+L +C+ H+N ++A  AA+R+  + D 
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDL 644

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
             +  ++ +SNIYA AG+W NVA+V+  M+++G+RK+P  S +E+  + H F++ D+SHP
Sbjct: 645 RDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHP 704

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           EM  I   +  ++  +   GY PD T  L DVDE  K   L +HSE+ A+AF L++T   
Sbjct: 705 EMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDG 764

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PI V+KNLR C DCH+  K++S++ +REIIVRD++RFH F+ G CSC D+W
Sbjct: 765 SPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 235/504 (46%), Gaps = 34/504 (6%)

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           G+ V  H    +M   ++    N +I+ + + G +   R +FD M ER  VSWT LI   
Sbjct: 57  GDLVHAHQVFDQMP-AKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGY 115

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            + +  KEA  L+ +M   GI+P+ VT+V ++S   +L+   +  ++  ++ +LG + N 
Sbjct: 116 LQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNL 175

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           ++ N+LVD Y K   +  A QLF    +++ V  N++M+ Y   GL  EA+ +  E+   
Sbjct: 176 MVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS 235

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G +P   T  + +SA+  L D   G+  HG+VL+        + N ++D Y         
Sbjct: 236 GIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYS-------- 287

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                                  K+  V+   ++F EMP  D IS+N ++        F+
Sbjct: 288 -----------------------KHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFK 324

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           E+ +LFR +   R    +     + S       L + + I+      G + + ++  ALV
Sbjct: 325 ESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALV 384

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+A+C   + A ++F  +  +    WTA I A   +G  E+ + +F++M R G+  D  
Sbjct: 385 DMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQA 444

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F  +L AC++   ++ G  L  S+    G    +     ++D   + G + +A+     
Sbjct: 445 TFASILRACANLASISLGRQL-HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGE 503

Query: 635 MPVEPNDVIWGSLLAACQKHQNVD 658
           MP E N V W +L++A  ++ NVD
Sbjct: 504 MP-ERNSVSWNALISAYAQNGNVD 526



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/596 (24%), Positives = 252/596 (42%), Gaps = 79/596 (13%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           +T N + Q H H++K G  +     + +V    +      L  A + F + +  N+ + T
Sbjct: 154 ETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKT---HCLYLASQLFKHML--NKDTVT 208

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
              +NSL+ GYS  GL  EAI L++EL   GI P  FTF  +L+A         G QVHG
Sbjct: 209 ---FNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            ++K  F  +VFV N L+++Y +   + +  ++F EM E + +S+  +I + A     KE
Sbjct: 266 FVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKE 325

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           +  LF ++              ++S      NL +G ++      +G    + + NALVD
Sbjct: 326 SFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVD 385

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KC     A+++F     ++ V    ++S YV+ G   E + +  +M   G   D+ T
Sbjct: 386 MYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQAT 445

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
             S + A A L  +  GR  H  ++R+G        + ++D Y KCG    A + F  M 
Sbjct: 446 FASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            +  VSWN+LI+   +NG+V+                                 +  F+ 
Sbjct: 506 ERNSVSWNALISAYAQNGNVDG-------------------------------TLNSFQQ 534

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           M+    K D V+ + V SAC + G ++ A W +                           
Sbjct: 535 MIQSGYKPDSVSFLSVLSACSHCGFVEEALWHF--------------------------- 567

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
                Q++    KR+   +T+ +  +   G  ++A +L  EM     +P  I++  VL +
Sbjct: 568 -NSMTQIYEVTPKRE--HYTSMVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLNS 621

Query: 583 C---SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           C    +  L  +      +M D+   +P    Y  M ++   AG       + K+M
Sbjct: 622 CRIHKNHELAKKAADRLFNMEDLRDAAP----YINMSNIYAVAGQWDNVAKVKKAM 673



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 3/250 (1%)

Query: 337 RPDRVTMLSAV---SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           +P R T+   +   ++ A    L    +   ++++ G        N  ++ +++ G    
Sbjct: 2   KPYRATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVH 61

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A ++FD M  K  +S N +I+G +K G +  ARE+F  M  R  +SW  ++GG  Q N  
Sbjct: 62  AHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQS 121

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           +EA  L+  M    I+ D VT+V + S  G L   ++   I+ ++ K G   ++ +  +L
Sbjct: 122 KEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSL 181

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VD + +      A Q+F+ M  +D   + + +   + EG  E+A+ELF E+   GIKP  
Sbjct: 182 VDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSD 241

Query: 574 IVFVGVLTAC 583
             F  +L+A 
Sbjct: 242 FTFAALLSAA 251


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/599 (37%), Positives = 356/599 (59%), Gaps = 3/599 (0%)

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA+ Q+      + + I + G   ++L+ N L+D+Y KCG +  A QLF E  +R+ V  
Sbjct: 13  CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72

Query: 309 NTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            +I++ + +  + R  L++L+ M  H G +PD       V A + LG L  G+  H   +
Sbjct: 73  ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFM 132

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            +     + + +++IDMY KCG+ + A  +FD +  K  VSW S+I+G  ++G    A +
Sbjct: 133 LSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK-VDRVTMVGVASACGYLG 486
           +F + P R+  SW  ++ GL Q      +  LF  M  E I  VD + +  V   C  L 
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
            L+L K I+  +   G    + ++ ALVDM+A+C D   A  +F RM ++DV +WT+ I 
Sbjct: 253 LLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIV 312

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
             A  G  E+A+ L++EM+   IKP+ + FVG+L ACSH GLV++G  LFRSMT  + ++
Sbjct: 313 GTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSIN 372

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           P + HY C++DLL R+G L EA +L+  +P +P++  W SLL+AC +H N+++    A+R
Sbjct: 373 PSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADR 432

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
           + +L PE    ++LLSN+YA A  W +V++VR  M    +RK PG SSI+       F +
Sbjct: 433 VLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHA 492

Query: 727 GDE-SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
           G+   HP  N I ++L++++  +R  GYVP+ + VL D+++QEK+  L  HSE+LA+A+G
Sbjct: 493 GESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYG 552

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L+       IR+VKNLR+C DCH+  K +S +  REI+VRD  R+H F++G CSC+DFW
Sbjct: 553 LLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 215/498 (43%), Gaps = 72/498 (14%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F   L  C +  +     ++H  I+K GFD+   + N L++ YG+CG I    ++FDEM 
Sbjct: 6   FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGD 259
            R+ VSW S++ A  +  +P+  + +   M   +G++P+     C++ AC+ L  L LG 
Sbjct: 66  NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           +V A         + ++ ++L+DMY KCG  D A+ +F     +N V   +++S Y R G
Sbjct: 126 QVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSG 185

Query: 320 LAREAL-------------------------------AILDEMLLHGPR-PDRVTMLSAV 347
              EA+                               ++ +EM   G    D + + S V
Sbjct: 186 RKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
              A L  L  G+  HG V+  G E    I N ++DMY KC     A  IF  M  K V+
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SW S+I G  ++G                                 EEA+ L+  M+  R
Sbjct: 306 SWTSIIVGTAQHGKA-------------------------------EEALTLYDEMVLSR 334

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRA 526
           IK + VT VG+  AC + G +   + ++  +  +  I+  +Q  T L+D+ +R G    A
Sbjct: 335 IKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394

Query: 527 MQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS----IVFVGVLT 581
             +  ++  K D   W + + A     N E  V + + +L   +KP+     I+   V  
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVL--DLKPEDPSTYILLSNVYA 452

Query: 582 ACSHGGLVNQGWHLFRSM 599
                G V++   L  SM
Sbjct: 453 GAEMWGSVSKVRKLMSSM 470



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 151/329 (45%), Gaps = 42/329 (12%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+ PD F F  ++ AC+       G QVH   +   F  D  V++ LI+ Y +CG   + 
Sbjct: 100 GLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEA 159

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF------------------------ 228
           R VFD +  +N VSWTS+I   AR     EA+ LF                         
Sbjct: 160 RAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGI 219

Query: 229 -------EMVEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
                  EM  EGI   + + +  V+  CA L  LELG ++   +  LG ++   + NAL
Sbjct: 220 YSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNAL 279

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           VDMY KC  +  AK +F     ++++   +I+    + G A EAL + DEM+L   +P+ 
Sbjct: 280 VDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNE 339

Query: 341 VTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           VT +  + A +  G +  GR     M   Y +   L+ +      ++D+  + G  + A 
Sbjct: 340 VTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHY----TCLLDLLSRSGHLDEAE 395

Query: 396 RIFDHMSNKT-VVSWNSLIAGLIKNGDVE 423
            + D +  K    +W SL++  +++ ++E
Sbjct: 396 NLLDKIPFKPDEPTWASLLSACMRHNNLE 424



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 4/256 (1%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI-LPDKFTFPFVLNACTKSSAFGEGVQV 160
            LF + +LI G    G G+ + SL+ E+   GI + D      V+  C   +    G Q+
Sbjct: 201 NLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQI 260

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           HG ++ +GF+  +F+ N L++ Y +C DI+  + +F  M  ++V+SWTS+I   A+    
Sbjct: 261 HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNA 279
           +EA+ L+ EMV   IKPN VT V ++ AC+    +  G  +  +   +  +  +      
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTC 380

Query: 280 LVDMYMKCGAVDTAKQLFGECKDR-NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR- 337
           L+D+  + G +D A+ L  +   + +     +++S  +R       + I D +L   P  
Sbjct: 381 LLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPED 440

Query: 338 PDRVTMLSAVSASAQL 353
           P    +LS V A A++
Sbjct: 441 PSTYILLSNVYAGAEM 456


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/705 (36%), Positives = 376/705 (53%), Gaps = 34/705 (4%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
            +L     +S+   G  VH  IVK +      F+ N LIN Y +       R V      
Sbjct: 11  LLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           RNVVSWTSL+   A+      A++ FFEM  EG+ PN  T  CV  A A L+    G ++
Sbjct: 71  RNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQI 130

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A   + G   +  +  +  DMY K    D A++LF E  +RNL   N  +SN V  G  
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRP 190

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
           +EA+    E    G +P+ +T    ++A +    L  G   HG V R+G +   S+ N +
Sbjct: 191 KEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGL 250

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           ID Y KC +                               + S+  +F+EM  ++ +SW 
Sbjct: 251 IDFYGKCKQ-------------------------------IRSSEIIFAEMGMKNAVSWC 279

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           +++    Q +  E+A  L+     E ++     +  V SAC  +  L+L + I+A+  K 
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +  ++ + +ALVDM+ +CG  + + Q F  M ++++    + IG  A +G  + A+ LF
Sbjct: 340 CVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALF 399

Query: 562 NEMLRQGI--KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            +M  +G    P+ + FV +L+ACS  G V  G  +F SM   +G+ P   HY C+VD+L
Sbjct: 400 EDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDML 459

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG++ +A + IK MP++P   +WG+L  AC+ H    +   AAE + +LDP+ SG HV
Sbjct: 460 GRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHV 519

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN +A+AG+W     VR +MK  GI+K  G S I V  +VH F + D SH     I +
Sbjct: 520 LLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQT 579

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           ML ++  ++  AGY PDL   L D++E+EK   +SHHSEKLA+AFGL++   ++PIR+ K
Sbjct: 580 MLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITK 639

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCHSF K VS    REIIVRDNNRFH F+ G CSC D+W
Sbjct: 640 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 184/376 (48%), Gaps = 35/376 (9%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+K FD   + N  +   ++ NS+  G        EAI  ++E    G  P+  TF   L
Sbjct: 162 ARKLFDEIPERNLETWNAYISNSVTDGRP-----KEAIEAFIEFRRIGGQPNSITFCGFL 216

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           NAC+       G+Q+HG + + GFD DV V N LI+FYG+C  I     +F EM  +N V
Sbjct: 217 NACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAV 276

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW SL+ A  +    ++A  L+    +E ++ +   +  V+SACA +  LELG  + A+ 
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHA 336

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            +  ++ N  + +ALVDMY KCG ++ ++Q F E  ++NLV  N+++  Y   G    AL
Sbjct: 337 VKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMAL 396

Query: 326 AILDEMLLH--GPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSIC 378
           A+ ++M     GP P+ +T +S +SA ++ G +  G      M   Y +  G E +  I 
Sbjct: 397 ALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCI- 455

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
              +DM  + G  E A      M  K  +S    + G ++N            M G+ H 
Sbjct: 456 ---VDMLGRAGMVEQAFEFIKKMPIKPTIS----VWGALQNA---------CRMHGKPH- 498

Query: 439 SWNTMLGGLTQENMFE 454
                LG L  EN+F+
Sbjct: 499 -----LGILAAENLFK 509



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 200/454 (44%), Gaps = 41/454 (9%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + SL+ G +  G    A+  + E+   G+ P+ FTFP V  A         G Q+H   V
Sbjct: 76  WTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAV 135

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K G   DVFV     + Y +     D R++FDE+ ERN+ +W + I        PKEA+ 
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIE 195

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F E    G +PNS+T    ++AC+    L+LG ++   +   G   +  + N L+D Y 
Sbjct: 196 AFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYG 255

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KC  + +++ +F E   +N V   ++++ YV+     +A  +               + S
Sbjct: 256 KCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISS 315

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +SA A +  L  GR  H + ++  +E    + + ++DMY KCG  E + + FD M  K 
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEM------PGRDHISWNTMLGGLTQENMFEEAMEL 459
           +V+ NSLI G    G V+ A  +F +M      P  +++++ ++L   ++    E  M++
Sbjct: 376 LVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKI 435

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M S                                    GI    +  + +VDM  R
Sbjct: 436 FDSMKSTY----------------------------------GIEPGAEHYSCIVDMLGR 461

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEG 552
            G  ++A +  ++M  K  +S W A   A  M G
Sbjct: 462 AGMVEQAFEFIKKMPIKPTISVWGALQNACRMHG 495


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/600 (37%), Positives = 347/600 (57%), Gaps = 32/600 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++  C   + L  G  V  ++ +   + + +M N L++MY KCG+++ A+++F +  +R+
Sbjct: 57  LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERD 116

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
            V   T++S Y +     +AL + ++ML  G  P+  T+ S + A+A      CG   HG
Sbjct: 117 FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHG 176

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           + ++ G +    + + ++D+Y + G                                ++ 
Sbjct: 177 FCVKCGFDSNVHVGSALLDLYTRYGL-------------------------------MDD 205

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A+ VF  +  R+ +SWN ++ G  +    E+A+ELF+ ML E  +    +   +  AC  
Sbjct: 206 AQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSS 265

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
            G L+  KW++AY+ K+G          L+DM+A+ G    A ++F R+ KRDV +W + 
Sbjct: 266 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 325

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           + A A  G G +AV  F EM R GI+P+ I F+ VLTACSH GL+++GWH +  M    G
Sbjct: 326 LTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DG 384

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           +  +  HY  +VDLLGRAG L  AL  I+ MP+EP   IW +LL AC+ H+N ++ AYAA
Sbjct: 385 IVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 444

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           E + ELDP+  G HV+L NIYAS G+W + ARVR +MKE G++K P  S +E+   +H F
Sbjct: 445 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 504

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            + DE HP+   I+    E+  ++++ GYVPD ++V++ VD+QE++  L +HSEK+A+AF
Sbjct: 505 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 564

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            L++T     I + KN+R+C DCHS  KL SK   REIIVRD NRFH F+ G+CSC D+W
Sbjct: 565 ALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 210/429 (48%), Gaps = 32/429 (7%)

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           +L G  I  D+  +  +L  CT      +G  VHG +++  F  D+ + N L+N Y +CG
Sbjct: 41  DLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCG 100

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            + + R+VFD+M ER+ V+WT+LI   ++ D P +A+ LF +M+  G  PN  T+  VI 
Sbjct: 101 SLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIK 160

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           A A  +    G ++  +  + G  +N  + +AL+D+Y + G +D A+ +F   + RN V 
Sbjct: 161 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 220

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N +++ + R     +AL +   ML  G RP   +  S   A +  G L  G+  H Y++
Sbjct: 221 WNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 280

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           ++G +      NT++DMY K G    A +IFD ++ + VVSWNSL+    ++G       
Sbjct: 281 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG------- 333

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                 G + + W            FEE       M    I+ + ++ + V +AC + G 
Sbjct: 334 -----FGNEAVCW------------FEE-------MRRGGIRPNEISFLSVLTACSHSGL 369

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIG 546
           LD     Y  ++K+GI  +      +VD+  R GD  RA++    M     +A W A + 
Sbjct: 370 LDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 429

Query: 547 AMAMEGNGE 555
           A  M  N E
Sbjct: 430 ACRMHKNTE 438



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 203/421 (48%), Gaps = 23/421 (5%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C     L Q    H H+++    H     + ++   A+ G+ E    A+K FD   +
Sbjct: 58  LKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEE---ARKVFDKMPE 114

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +        + +LI GYS      +A+ L+ ++  FG  P++FT   V+ A        
Sbjct: 115 RD-----FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G Q+HG  VK GFD +V V + L++ Y   G + D + VFD +  RN VSW +LI   A
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           RR   ++A+ LF  M+ EG +P+  +   +  AC+    LE G  V AY+ + G K  A 
Sbjct: 230 RRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 289

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
             N L+DMY K G++  A+++F     R++V  N++++ Y + G   EA+   +EM   G
Sbjct: 290 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGG 349

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG--LEGWDSICNTMIDMYMKCGKQEM 393
            RP+ ++ LS ++A +  G L  G   +  + ++G  LE W  +  T++D+  + G    
Sbjct: 350 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYV--TIVDLLGRAGDLNR 407

Query: 394 ACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFS---EMPGRDHISWNTMLG 445
           A R  + M    T   W +L+     + + E    +A  VF    + PG   I +N    
Sbjct: 408 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 467

Query: 446 G 446
           G
Sbjct: 468 G 468



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 26/195 (13%)

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           I VDR     +   C     L   + ++ ++ ++    D+ +   L++M+A+CG  + A 
Sbjct: 47  IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEAR 106

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS--- 584
           +VF +M +RD   WT  I   +       A+ LFN+MLR G  P+      V+ A +   
Sbjct: 107 KVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAER 166

Query: 585 --------HGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLGRAGLLGEALDLIKSM 635
                   HG  V  G+                VH G  ++DL  R GL+ +A  +  ++
Sbjct: 167 RGCCGHQLHGFCVKCGF-------------DSNVHVGSALLDLYTRYGLMDDAQLVFDAL 213

Query: 636 PVEPNDVIWGSLLAA 650
               NDV W +L+A 
Sbjct: 214 ESR-NDVSWNALIAG 227


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 261/751 (34%), Positives = 406/751 (54%), Gaps = 46/751 (6%)

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F++N +IRG +  GL   A++ Y  +   G  PD+FTFP VL  C +  A  EG   H A
Sbjct: 74  FLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTFPVVLKCCARLGALDEGRAAHSA 133

Query: 164 IVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++G    DV+  N L+ FY   G + D  RVFD M  R+VV+W S++       L   
Sbjct: 134 AIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTL 193

Query: 223 AVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           A+  F EM E   ++ + V ++  ++AC     L  G  V AY+   GM+ +  +  +++
Sbjct: 194 ALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSIL 253

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY KCG + +A+ +F     R +V  N ++  Y       EA     +M   G + + V
Sbjct: 254 DMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVV 313

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T ++ ++A AQ    L GR  HGY+ R        +   +++MY K GK + + ++F  M
Sbjct: 314 TAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQM 373

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
           + KT+VSWN++IA  +                                + M+ EA+ LF 
Sbjct: 374 TTKTLVSWNNMIAAYM-------------------------------YKEMYMEAITLFL 402

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            +L++ +  D  TM  V  A   LG L   + +++YI + G   +  +  A++ M+ARCG
Sbjct: 403 DLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCG 462

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           D   + ++F +M  +DV +W   I   A+ G G  A+E+F+EM   G++P+   FV VLT
Sbjct: 463 DVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLT 522

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACS  GL ++GW  F SM   +G+ PQI HYGCM DLLGRAG L E +  I++MP++P  
Sbjct: 523 ACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTF 582

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEK-----SGVHVLLSNIYASAGKWTNVAR 696
            +WGSLL A +   ++DIA YAAERI +L+ ++     +G +VL+S++YA AG+W +V R
Sbjct: 583 RVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVER 642

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE---MNNISSMLREMNCRLRDAGY 753
           ++  M+E+G+R+    S +E++G    F +GD +HP+   +  +S+ L      +RD   
Sbjct: 643 IKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIGEMRDPMN 702

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
             D T++     +  +    + HS +LA+ FGLIST    PI V KN+R+C DCH   KL
Sbjct: 703 QSDPTSL-----DSRRTTEPNKHSVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKL 757

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +SK   R I+V D N +H F  GSC C D+W
Sbjct: 758 ISKYSGRRIVVGDTNIYHQFSDGSCCCGDYW 788



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 226/492 (45%), Gaps = 42/492 (8%)

Query: 45  LNELKQPHCHILKQGLGHKPSYI-SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           L+E +  H   ++ G+     Y  + ++   A++G  +    A++ FD        +  +
Sbjct: 124 LDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDD---AERVFD-----GMPARDV 175

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
             +NS++ GY   GLG  A+  + E+     +  D       L AC   SA  +G +VH 
Sbjct: 176 VTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHA 235

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ G + DV V   +++ Y +CGDI     VF  M  R VV+W  +I   A  + P+E
Sbjct: 236 YVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEE 295

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A   F +M  EG +   VT + +++ACA+ ++   G  V  YI       + ++  AL++
Sbjct: 296 AFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLE 355

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K G V +++++FG+   + LV  N +++ Y+   +  EA+ +  ++L     PD  T
Sbjct: 356 MYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFT 415

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M + V A   LG L   R  H Y++R G      I N ++ MY +CG    +  IFD M+
Sbjct: 416 MSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMA 475

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K V+SWN++I G   +G   SA E+FSEM                              
Sbjct: 476 AKDVISWNTMIMGYAIHGQGRSALEMFSEMK----------------------------- 506

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG 521
                ++ +  T V V +AC   G  D     +  ++++ G+   ++    + D+  R G
Sbjct: 507 --CNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAG 564

Query: 522 DPQRAMQVFRRM 533
           D +  MQ    M
Sbjct: 565 DLKEVMQFIENM 576



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 195/427 (45%), Gaps = 28/427 (6%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSI-GSLKNC---KTLNELKQPHCHILKQGLGHK---P 64
           L T  +      H+A     D   I  +L  C     L + ++ H ++++ G+ H     
Sbjct: 190 LGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVG 249

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           + I  + C C  + + E +                S T+  +N +I GY+      EA  
Sbjct: 250 TSILDMYCKCGDIASAEGVFATMP-----------SRTVVTWNCMIGGYALNERPEEAFD 298

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
            +V++   G   +  T   +L AC ++ +   G  VHG I +  F   V +E  L+  Y 
Sbjct: 299 CFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYS 358

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           + G +    +VF +M+ + +VSW ++I A   +++  EA+ LF +++ + + P+  TM  
Sbjct: 359 KVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSA 418

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V+ A   L  L    ++ +YI  LG   N L++NA++ MY +CG V +++++F +   ++
Sbjct: 419 VVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKD 478

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG----- 359
           ++  NT++  Y   G  R AL +  EM  +G RP+  T +S ++A +  G    G     
Sbjct: 479 VISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFN 538

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIK 418
            M   Y +   +E +      M D+  + G  +   +  ++M  + T   W SL+     
Sbjct: 539 SMQRDYGMIPQIEHY----GCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTASRN 594

Query: 419 NGDVESA 425
             D++ A
Sbjct: 595 RNDIDIA 601



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 169/377 (44%), Gaps = 37/377 (9%)

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             +LV  +   G +D A++       R+  L N ++      GL   ALA    ML  G 
Sbjct: 45  TKSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGA 104

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEMAC 395
           RPDR T    +   A+LG L  GR  H   +R G+   D    N+++  Y + G  + A 
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           R+FD M  + VV+WNS++ G + NG    A   F EM                      E
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREM---------------------HE 203

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           A+E         ++ D V ++   +AC    AL   + ++AY+ ++G+  D+++ T+++D
Sbjct: 204 ALE---------VQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILD 254

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ +CGD   A  VF  M  R V  W   IG  A+    E+A + F +M  +G + + + 
Sbjct: 255 MYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVT 314

Query: 576 FVGVLTACSH--GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
            + +L AC+     L  +  H + +        P +V    ++++  + G +  +  +  
Sbjct: 315 AINLLAACAQTESSLYGRSVHGYITRRQF---LPHVVLETALLEMYSKVGKVKSSEKVFG 371

Query: 634 SMPVEPNDVIWGSLLAA 650
            M  +   V W +++AA
Sbjct: 372 QMTTK-TLVSWNNMIAA 387


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/764 (32%), Positives = 400/764 (52%), Gaps = 45/764 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  AQ  F      N T+ T+ M     R ++  G   +A+SL+  + G G++PD+ T  
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMM-----RAHAAAGRTSDALSLFRAMLGEGVIPDRVTVT 144

Query: 143 FVLN--ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
            VLN   CT  S       +H   +K G D  VFV N L++ Y + G +   RRVF EM 
Sbjct: 145 TVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH 197

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +++ V++ +++  C++  L  +A+ LF  M   GI     T   +++  A + +L LG +
Sbjct: 198 DKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQ 257

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V A +       N  + N+L+D Y KC  +D  ++LF E  +R+ V  N I++ Y     
Sbjct: 258 VHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC 317

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           A   L +  EM   G     +   + +S +  L D+  G+  H  ++  GL   D + N 
Sbjct: 318 AATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA 377

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMY KCG                                +++A+  FS    +  ISW
Sbjct: 378 LIDMYSKCGM-------------------------------LDAAKSNFSNRSEKSAISW 406

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
             ++ G  Q    EEA++LF  M    ++ DR T   +  A   L  + L + +++Y+ +
Sbjct: 407 TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 466

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           +G    +   + LVDM+A+CG    A++ F  M +R+  +W A I A A  G  + A+++
Sbjct: 467 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 526

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F  ML  G  PDS+ F+ VL ACSH GL ++    F  M   + +SP   HY C++D LG
Sbjct: 527 FEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 586

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           R G   +   ++  MP + + +IW S+L +C+ H N ++A  AA+++  ++P  +  +V+
Sbjct: 587 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVI 646

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSNIYA AG+W + A V+  M+++G+RK  G S +E+  K++ F S D + P ++ I   
Sbjct: 647 LSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDE 706

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L  +   +   GY PD+T  L  VD + K   L +HSE+LA+AF L++T    PIR++KN
Sbjct: 707 LDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKN 766

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L  C DCH+  K++SK+ +R+IIVRD+ RFH F+ G CSC D+W
Sbjct: 767 LTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/389 (21%), Positives = 164/389 (42%), Gaps = 39/389 (10%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           R  A  D++  K N   +N ++  Y   G +  A+ LF     RN      +M  +   G
Sbjct: 61  RARAMFDQMPHK-NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAG 119

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              +AL++   ML  G  PDRVT+ + ++        L     H + ++ GL+    +CN
Sbjct: 120 RTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL-----HPFAIKFGLDTHVFVCN 174

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           T++D Y                                K+G + +AR VF EM  +D ++
Sbjct: 175 TLLDAY-------------------------------CKHGLLAAARRVFLEMHDKDAVT 203

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           +N M+ G ++E +  +A++LF  M    I     T   + +    +  L L   ++A + 
Sbjct: 204 YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVL 263

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           ++    ++ +  +L+D +++C       ++F  M +RD  ++   I A A        + 
Sbjct: 264 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 323

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF EM + G     + +  +L+       V+ G  +   +  + G++ + +    ++D+ 
Sbjct: 324 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV-LLGLASEDLLGNALIDMY 382

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
            + G+L  A     +   E + + W +L+
Sbjct: 383 SKCGMLDAAKSNFSNRS-EKSAISWTALI 410


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/694 (35%), Positives = 386/694 (55%), Gaps = 34/694 (4%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-- 234
           N  I      G+I   R  F+ M  R   S+ +L+    R  LP  A+ LF  M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 235 -----IKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL------GMKANALMV------ 277
                I   S+    +  A A L ++     V ++   L      G+ A+A+ +      
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 278 ------NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
                   L+   +  G V+ A++LF E  DR++V    ++S Y + G   EA A+ DEM
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
               P+ + V+  + +S  AQ G++   R     +       W      M+  Y++ G  
Sbjct: 201 ----PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW----TAMLVGYIQAGHV 252

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           E A  +F+ M    V + N+++ G  + G V++A+ VF +M  RD  +W+ M+    Q  
Sbjct: 253 EDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNE 312

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  FR ML   ++ +  +++ + + C  L  LD  + ++A + +     D+   +
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL+ M+ +CG+  +A +VF   E +D+  W + I   A  G GEQA+ +F++M   G+ P
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSP 432

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I ++G LTACS+ G V +G  +F SMT    + P   HY CMVDLLGR+GL+ EA DL
Sbjct: 433 DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL 492

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           IK+MPVEP+ VIWG+L+ AC+ H+N +IA +AA+++ EL+P  +G +VLLS+IY S G+W
Sbjct: 493 IKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRW 552

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE-SHPEMNNISSMLREMNCRLRD 750
            + +++R  +  + + K PG S IE + +VH FTSGD  +HPE   I  +L +++  L +
Sbjct: 553 EDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLME 612

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           +GY  D + VL D+DE++K + L +HSE+ A+A+GL+   + MPIRV+KNLR+C DCHS 
Sbjct: 613 SGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSA 672

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KL++K+  REII+RD NRFH F+ G CSC D+W
Sbjct: 673 IKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 205/457 (44%), Gaps = 55/457 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHGA 163
           + SL+RGY   GL  +AI L+ ++      P++   ++  +L     +    E  ++   
Sbjct: 115 FTSLLRGYVRHGLLADAIRLFQQM------PERNHVSYTVLLGGLLDAGRVNEARRLFDE 168

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +     DRDV     +++ Y + G I + R +FDEM +RNVVSWT++I   A+      A
Sbjct: 169 MP----DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLA 224

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA-NALMVNALVD 282
             LF  M E     N V+   ++    +  ++E    +   + E  + A NA+MV     
Sbjct: 225 RKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG---- 276

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            + + G VD AK +F +  +R+    + ++  Y +     EAL+   EML  G RP+  +
Sbjct: 277 -FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPS 335

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           ++S ++  A L  L  GR  H  +LR   +      + +I MY+KCG  + A R+F    
Sbjct: 336 VISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K +V WNS+I G  ++G  E A  +F +M           L G++              
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDM----------RLAGMSP------------- 432

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG 521
                   D +T +G  +AC Y G +   + I+  +  N  I    +  + +VD+  R G
Sbjct: 433 --------DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
             + A  + + M  + D   W A +GA  M  N E A
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           + M+NS+I GY+  GLG +A+ ++ ++   G+ PD  T+   L AC+ +    EG ++  
Sbjct: 399 IVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFN 458

Query: 163 AI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
           ++ V           +C+++  G  G + +   +   M  E + V W +L+ AC
Sbjct: 459 SMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/775 (33%), Positives = 414/775 (53%), Gaps = 44/775 (5%)

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG----FG 133
           GT  S++ A + F    + N     L  +NS+IR +S  GL  E   L  ++        
Sbjct: 230 GTNGSVSDALRVFKIMPERN-----LVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIA 284

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
             PD  T   VL  C +    G G  VHG  +K+  D++V V N L++ Y +CG I D +
Sbjct: 285 FTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQ 344

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAK 251
            +F   + +NVVSW +++   +      +   L  +M+  G  ++ + VT++  +  C +
Sbjct: 345 VIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFE 404

Query: 252 LQNL-ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
              L  L +  C  + +  +  N L+ NA V  Y KCG++  A ++F   + + +   N 
Sbjct: 405 ESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNA 464

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++  Y +    R +L    +M   G  PD  T+ S +SA +Q+  L  G+  HG ++RN 
Sbjct: 465 LIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR 524

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           LE    +  +++ +Y+ CG                               ++ +A  +F 
Sbjct: 525 LERDSFVYISLLSLYIHCG-------------------------------ELSTAHVLFD 553

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
            M  +  +SWNTM+ G  Q    E A+ LFR M+   ++   ++M+ V  AC  L +L L
Sbjct: 554 AMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRL 613

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            +  + Y  K  +  +  +A +++DM+A+ G    + +VF  +++R V++W A +    +
Sbjct: 614 GREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGI 673

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G  ++A++LF EM R G  PD + F+GVLTAC+H GLV++G      M  + G++P + 
Sbjct: 674 HGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLK 733

Query: 611 HYGCMVDLLGRAGLLGEALDL-IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
           HY C++D+L RAG L EAL +  + M  EP   IW  LL++C+ H+N+++    A ++  
Sbjct: 734 HYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFV 793

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
            +PEK   +VLLSN+YA +GKW  V +VR +MKE  +RK  G S IE+NGKV  F +G+ 
Sbjct: 794 SEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGES 853

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           S      I S+   +   +   GY PD ++V  D+ E+EK   L  HSEKLA+ +GLI T
Sbjct: 854 SLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRT 913

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S+   +RV KNLR+C DCH+ AKL+SKV +REI+VRDN RFH F+ G CSC D+W
Sbjct: 914 SEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 245/512 (47%), Gaps = 54/512 (10%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFV 144
           ++  FD   K N     LF +N++I  YS   L    + ++V++    G+LPD FTFP V
Sbjct: 136 SRSVFDALRKKN-----LFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCV 190

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           + AC   S    G+ VHG +VK     DVFV N L++FYG  G + D  RVF  M ERN+
Sbjct: 191 VKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNL 250

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEE----GIKPNSVTMVCVISACAKLQNLELGDR 260
           VSW S+I   +   L +E   L  +M+E+       P+  T+  V+  CA+ + + +G  
Sbjct: 251 VSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKG 310

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V     +L +    ++ NAL+DMY KCG ++ A+ +F    ++N+V  NT++  +   G 
Sbjct: 311 VHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGD 370

Query: 321 AREALAILDEMLLHGP--RPDRVTMLSAV------SASAQLGDLLCGRMCHGYVLRNGLE 372
             +   +L +ML  G   R D VT+L+AV      S    L +L C  +   +V  N L 
Sbjct: 371 IHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNEL- 429

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + N  +  Y KCG    A R+F  + +KTV SWN+LI G  ++ D   + + + +M
Sbjct: 430 ----VANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQM 485

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                                           S  +  D  T+  + SAC  + +L L K
Sbjct: 486 K-------------------------------SSGLLPDLFTVCSLLSACSQIKSLKLGK 514

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++  I +N +  D  +  +L+ ++  CG+   A  +F  ME + + +W   +      G
Sbjct: 515 EVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNG 574

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
             E+A+ LF +M+  G++P  I  + V  ACS
Sbjct: 575 FPERALSLFRQMVLYGVQPCEISMMSVFGACS 606



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 252/546 (46%), Gaps = 64/546 (11%)

Query: 58  QGLGHKPSYISKVVCTCAQMGTFES---LTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
            GL  K S   +VV   A M  +     +  AQ  F      N  S     +N+++ G+S
Sbjct: 312 HGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVS-----WNTMVGGFS 366

Query: 115 CIGLGVEAISLYVE-LAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF-DR 171
             G   +   L  + LAG G L  D+ T    +  C + S      ++H   +K  F   
Sbjct: 367 AAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHN 426

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           +  V N  +  Y +CG +    RVF  +  + V SW +LI   ++   P+ ++  +F+M 
Sbjct: 427 NELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMK 486

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
             G+ P+  T+  ++SAC+++++L+LG  V   I    ++ ++ +  +L+ +Y+ CG + 
Sbjct: 487 SSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELS 546

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
           TA  LF   +D+ LV  NT+++ Y++ G    AL++  +M+L+G +P  ++M+S   A +
Sbjct: 547 TAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            L  L  GR  HGY L+  LE    I  ++IDMY K G    + ++F+ +  ++V SWN+
Sbjct: 607 LLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNA 666

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           ++ G   +G  + A ++F EM    H                                 D
Sbjct: 667 MVMGYGIHGRAKEAIKLFEEMQRTGHCP-------------------------------D 695

Query: 472 RVTMVGVASACGYLGA-------LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
            +T +GV +AC + G        LD  K ++      G++  ++    ++DM  R G   
Sbjct: 696 ELTFLGVLTACNHSGLVHEGLTYLDQMKTLF------GMNPTLKHYACVIDMLVRAGKLD 749

Query: 525 RAMQVFRR--MEKRDVSAWTAAIGAMAMEGN---GEQ-AVELFNEMLRQGIKPDSIVFVG 578
            A+++      E+  V  W   + +  +  N   GE+ A +LF   + +  KP++ V + 
Sbjct: 750 EALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLF---VSEPEKPENYVLLS 806

Query: 579 VLTACS 584
            L A S
Sbjct: 807 NLYAGS 812



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 228/517 (44%), Gaps = 78/517 (15%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKP 237
           +I  Y  CG   D R VFD + ++N+  W ++I + +R +L    + +F +M+ E G+ P
Sbjct: 123 VITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLP 182

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           ++ T  CV+ ACA +  +++G  V   + +  +  +  + NALV  Y   G+V  A ++F
Sbjct: 183 DNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVF 242

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR----PDRVTMLSAVSASAQL 353
               +RNLV  N+++  +   GL+ E   +L +M+         PD  T+ + +   A+ 
Sbjct: 243 KIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARD 302

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
            ++  G+  HG  ++  L+    + N ++DMY KCG    A  IF   +NK VVSWN+++
Sbjct: 303 REIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMV 362

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            G    GD+    ++  +M          + GG                     ++ D V
Sbjct: 363 GGFSAAGDIHKTFDLLRQM----------LAGG-------------------GDLRADEV 393

Query: 474 TMVGVASACGYLGALDLAKWIYAY-IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           T++     C     L   K ++ Y +++  +H +  +A A V  +A+CG    A +VF  
Sbjct: 394 TILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCS 453

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-------- 584
           +  + V++W A IG  +   +   +++ + +M   G+ PD      +L+ACS        
Sbjct: 454 IRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLG 513

Query: 585 ---------------------------HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
                                      H G ++    LF +M D       +V +  MV+
Sbjct: 514 KEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMED-----KTLVSWNTMVN 568

Query: 618 LLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAAC 651
              + G    AL L + M    V+P ++   S+  AC
Sbjct: 569 GYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGAC 605



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 207/396 (52%), Gaps = 20/396 (5%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKV-VCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           L  LK+ HC+ LKQ   H    ++   V + A+ G   SL+YA + F         S T+
Sbjct: 408 LPNLKELHCYSLKQEFVHNNELVANAFVASYAKCG---SLSYAHRVFCSI-----RSKTV 459

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
             +N+LI GYS       ++  Y ++   G+LPD FT   +L+AC++  +   G +VHG 
Sbjct: 460 NSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGL 519

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           I++   +RD FV   L++ Y  CG++     +FD M ++ +VSW +++    +   P+ A
Sbjct: 520 IIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERA 579

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + LF +MV  G++P  ++M+ V  AC+ L +L LG     Y  +  ++ NA +  +++DM
Sbjct: 580 LSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDM 639

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y K G+V  + ++F   K+R++   N ++  Y   G A+EA+ + +EM   G  PD +T 
Sbjct: 640 YAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTF 699

Query: 344 LSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI- 397
           L  ++A    G +  G     +M   + +   L+ +  +    IDM ++ GK + A +I 
Sbjct: 700 LGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACV----IDMLVRAGKLDEALKIA 755

Query: 398 FDHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
            + MS +  V  WN L++    + ++E   ++ +++
Sbjct: 756 TEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKL 791



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 145/340 (42%), Gaps = 31/340 (9%)

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANA-LMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           A  + ++++LG ++   + E    +N  ++   ++ MY  CG+ D ++ +F   + +NL 
Sbjct: 90  ASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLF 149

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
             N ++S+Y R  L    L +  +M+   G  PD  T    V A A + ++  G   HG 
Sbjct: 150 QWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGL 209

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           V++  L     + N ++  Y   G    A R+F  M  + +VSWNS+I     NG  E  
Sbjct: 210 VVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEEC 269

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
             +  +M  +D             E  F                 D  T+  V   C   
Sbjct: 270 FLLLGQMMEKD------------DEIAFTP---------------DVATLATVLPVCARD 302

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
             + + K ++    K  +  ++ +  AL+DM+++CG    A  +F+    ++V +W   +
Sbjct: 303 REIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMV 362

Query: 546 GAMAMEGNGEQAVELFNEMLRQG--IKPDSIVFVGVLTAC 583
           G  +  G+  +  +L  +ML  G  ++ D +  +  +  C
Sbjct: 363 GGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVC 402



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 131/327 (40%), Gaps = 55/327 (16%)

Query: 349 ASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           AS +  D+  GR  H  V  +  L   D +C  +I MY  CG  + +  +FD +  K + 
Sbjct: 90  ASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLF 149

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
            WN++I+   +N                                ++   +E+F  M++E 
Sbjct: 150 QWNAVISSYSRN-------------------------------ELYHNVLEMFVKMITES 178

Query: 468 -IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            +  D  T   V  AC  +  + +   ++  + K  +  D+ ++ ALV  +   G    A
Sbjct: 179 GLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDA 238

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ----GIKPDSIVFVGVLTA 582
           ++VF+ M +R++ +W + I   +  G  E+   L  +M+ +       PD      VL  
Sbjct: 239 LRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPV 298

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVS------PQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           C+    +  G         +HG++       ++V    ++D+  + G + +A  +I  + 
Sbjct: 299 CARDREIGVG-------KGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDA-QVIFKLN 350

Query: 637 VEPNDVIW----GSLLAACQKHQNVDI 659
              N V W    G   AA   H+  D+
Sbjct: 351 NNKNVVSWNTMVGGFSAAGDIHKTFDL 377


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/599 (37%), Positives = 356/599 (59%), Gaps = 3/599 (0%)

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA+ Q+      + + I + G   ++L+ N L+D+Y KCG +  A QLF E  +R+ V  
Sbjct: 13  CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72

Query: 309 NTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            +I++ + +  + R  L++L+ M  H G +PD       V A + LG L  G+  H   +
Sbjct: 73  ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFM 132

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            +     + + +++IDMY KCG+ + A  +FD +  K  VSW S+I+G  ++G    A +
Sbjct: 133 LSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK-VDRVTMVGVASACGYLG 486
           +F + P R+  SW  ++ GL Q      +  LF  M  E I  VD + +  V   C  L 
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
            L+L K I+  +   G    + ++ ALVDM+A+C D   A  +F RM ++DV +WT+ I 
Sbjct: 253 LLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIV 312

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
             A  G  E+A+ L++EM+   IKP+ + FVG+L ACSH GLV++G  LFRSMT  + ++
Sbjct: 313 GTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSIN 372

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           P + HY C++DLL R+G L EA +L+  +P +P++  W SLL+AC +H N+++    A+R
Sbjct: 373 PSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADR 432

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
           + +L PE    ++LLSN+YA A  W +V++VR  M    +RK PG SSI+       F +
Sbjct: 433 VLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHA 492

Query: 727 GDE-SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
           G+   HP  N I ++L++++  +R  GYVP+ + VL D+++QEK+  L  HSE+LA+A+G
Sbjct: 493 GESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYG 552

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L+       IR+VKNLR+C DCH+  K +S +  REI+VRD  R+H F++G CSC+DFW
Sbjct: 553 LLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 215/498 (43%), Gaps = 72/498 (14%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F   L  C +  +     ++H  I+K GFD+   + N L++ YG+CG I    ++FDEM 
Sbjct: 6   FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGD 259
            R+ VSW S++ A  +  +P+  + +   M   +G++P+     C++ AC+ L  L LG 
Sbjct: 66  NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           +V A         + ++ ++L+DMY KCG  D A+ +F     +N V   +++S Y R G
Sbjct: 126 QVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSG 185

Query: 320 LAREAL-------------------------------AILDEMLLHGPR-PDRVTMLSAV 347
              EA+                               ++ +EM   G    D + + S V
Sbjct: 186 RKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
              A L  L  G+  HG V+  G E    I N ++DMY KC     A  IF  M  K V+
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SW S+I G  ++G                                 EEA+ L+  M+  R
Sbjct: 306 SWTSIIVGTAQHGKA-------------------------------EEALTLYDEMVLSR 334

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRA 526
           IK + VT VG+  AC + G +   + ++  +  +  I+  +Q  T L+D+ +R G    A
Sbjct: 335 IKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394

Query: 527 MQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS----IVFVGVLT 581
             +  ++  K D   W + + A     N E  V + + +L   +KP+     I+   V  
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVL--DLKPEDPSTYILLSNVYA 452

Query: 582 ACSHGGLVNQGWHLFRSM 599
                G V++   L  SM
Sbjct: 453 GAEMWGSVSKVRKLMSSM 470



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 42/329 (12%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+ PD F F  ++ AC+       G QVH   +   F  D  V++ LI+ Y +CG   D 
Sbjct: 100 GLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDA 159

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF------------------------ 228
           R VFD +  +N VSWTS+I   AR     EA+ LF                         
Sbjct: 160 RAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGI 219

Query: 229 -------EMVEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
                  EM  EGI   + + +  V+  CA L  LELG ++   +  LG ++   + NAL
Sbjct: 220 YSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNAL 279

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           VDMY KC  +  AK +F     ++++   +I+    + G A EAL + DEM+L   +P+ 
Sbjct: 280 VDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNE 339

Query: 341 VTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           VT +  + A +  G +  GR     M   Y +   L+ +      ++D+  + G  + A 
Sbjct: 340 VTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHY----TCLLDLLSRSGHLDEAE 395

Query: 396 RIFDHMSNKT-VVSWNSLIAGLIKNGDVE 423
            + D +  K    +W SL++  +++ ++E
Sbjct: 396 NLLDKIPFKPDEPTWASLLSACMRHNNLE 424



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 4/256 (1%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI-LPDKFTFPFVLNACTKSSAFGEGVQV 160
            LF + +LI G    G G+ + SL+ E+   GI + D      V+  C   +    G Q+
Sbjct: 201 NLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQI 260

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           HG ++ +GF+  +F+ N L++ Y +C DI+  + +F  M  ++V+SWTS+I   A+    
Sbjct: 261 HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNA 279
           +EA+ L+ EMV   IKPN VT V ++ AC+    +  G  +  +   +  +  +      
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTC 380

Query: 280 LVDMYMKCGAVDTAKQLFGECKDR-NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR- 337
           L+D+  + G +D A+ L  +   + +     +++S  +R       + I D +L   P  
Sbjct: 381 LLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPED 440

Query: 338 PDRVTMLSAVSASAQL 353
           P    +LS V A A++
Sbjct: 441 PSTYILLSNVYAGAEM 456


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/610 (36%), Positives = 357/610 (58%), Gaps = 33/610 (5%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           ++P       +++ C  L+ L+ G  + A+I     + + +++N +++MY KCG+++ A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            LF +   +++V    ++S Y + G A EALA+  +ML  G +P+  T+ S + AS    
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
               GR  H + L+ G +    + ++++DMY +      A  IF+ ++ K VV       
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV------- 273

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                                   SWN ++ G  ++   E  M LF  ML +  +    T
Sbjct: 274 ------------------------SWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFT 309

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              V  AC   G+L+  KW++A++ K+G      +   L+DM+A+ G  + A +VFRR+ 
Sbjct: 310 YSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLV 368

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           K+D+ +W + I   A  G G +A++LF +ML+  ++P+ I F+ VLTACSH GL+++G +
Sbjct: 369 KQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQY 428

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F  M   H +  Q+ H+  +VDLLGRAG L EA   I+ MP++P   +WG+LL AC+ H
Sbjct: 429 YFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH 487

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +N+D+  YAAE+I ELDP  SG HVLLSNIYASAG+ ++ A+VR  MKE G++K P  S 
Sbjct: 488 KNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSW 547

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           +E+  +VH F + D+SHP    I  M  +++ ++++ GYVPD ++VL  +++Q+++  L 
Sbjct: 548 VEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQ 607

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEKLA+AF ++ T   + IR+ KN+R+C DCHS  K  S+V  REIIVRD NRFH F 
Sbjct: 608 YHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFL 667

Query: 835 QGSCSCSDFW 844
            G CSC D+W
Sbjct: 668 HGMCSCRDYW 677



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 209/433 (48%), Gaps = 40/433 (9%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P++  +  +LN CT      +G  +H  I    F+ D+ + N ++N Y +CG + + + +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FD+M  +++VSWT LI   ++     EA+ LF +M+  G +PN  T+  ++ A     + 
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
             G ++ A+  + G   N  + ++L+DMY +   +  AK +F     +N+V  N +++ +
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            R G     + +  +ML  G  P   T  S+V A A  G L  G+  H +V+++G +   
Sbjct: 283 ARKGEGEHVMRLFXQMLRQGFEPTHFT-YSSVLACASSGSLEQGKWVHAHVIKSGGQPIA 341

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            I NT+IDMY K G  + A ++F  +  + +VSWNS+I+G  ++G               
Sbjct: 342 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG--------------- 386

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                   LG         EA++LF  ML  +++ + +T + V +AC + G LD  ++ +
Sbjct: 387 --------LGA--------EALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF 430

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN- 553
             ++K+ I   +     +VD+  R G    A +    M  +  +A W A +GA  M  N 
Sbjct: 431 ELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNM 490

Query: 554 ------GEQAVEL 560
                  EQ  EL
Sbjct: 491 DLGVYAAEQIFEL 503



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 204/403 (50%), Gaps = 17/403 (4%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L  C  L +LKQ    H HI           ++ ++   A+ G+ E    AQ  FD    
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEE---AQDLFDKMPT 168

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S T+     LI GYS  G   EA++L+ ++   G  P++FT   +L A     +  
Sbjct: 169 KDMVSWTV-----LISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDH 223

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G Q+H   +K G+D +V V + L++ Y     + + + +F+ ++ +NVVSW +LI   A
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHA 283

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           R+   +  + LF +M+ +G +P   T   V+ ACA   +LE G  V A++ + G +  A 
Sbjct: 284 RKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAY 342

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + N L+DMY K G++  AK++F     +++V  N+I+S Y + GL  EAL + ++ML   
Sbjct: 343 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 402

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+ +T LS ++A +  G L  G+     + ++ +E   +   T++D+  + G+   A 
Sbjct: 403 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEAN 462

Query: 396 RIFDHMSNK-TVVSWNSLIAG--LIKNGD--VESAREVFSEMP 433
           +  + M  K T   W +L+    + KN D  V +A ++F   P
Sbjct: 463 KFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDP 505


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/576 (40%), Positives = 336/576 (58%), Gaps = 31/576 (5%)

Query: 269  GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
            GM  N ++ N LV  Y    A+D A  LF     R+ V  + ++  + ++G         
Sbjct: 765  GMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF 824

Query: 329  DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             E++  G RPD  T+   + A   L +L  GR+ H  V + GL+    +C  ++DMY KC
Sbjct: 825  RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC 884

Query: 389  GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
                                            ++E AR +F +M  RD ++W  M+GG  
Sbjct: 885  R-------------------------------EIEDARFLFDKMXERDLVTWTVMIGGYA 913

Query: 449  QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
            +     E++ LF  M  E +  D+V MV V  AC  LGA+  A+ I  YI++     D+ 
Sbjct: 914  ECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI 973

Query: 509  LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
            L TA++DM A+CG  + A ++F RME+++V +W+A I A    G G +A++LF  MLR G
Sbjct: 974  LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 1033

Query: 569  IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
            I P+ I  V +L ACSH GLV +G   F  M + + V   + HY C+VDLLGRAG L EA
Sbjct: 1034 ILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEA 1093

Query: 629  LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
            L LI SM  E ++ +WG+ L AC+ H++V +A  AA  + EL P+  G ++LLSNIYA+A
Sbjct: 1094 LKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANA 1153

Query: 689  GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
            G+W +VA++R  M ++ ++K+PG + IEV+ K H+F+ GD +HP    I  ML+ +  +L
Sbjct: 1154 GRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL 1213

Query: 749  RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
               GYVPD   VL DVDE+ K  +L  HSEKLA+AFGLI+T +  PIR++KNLR+C DCH
Sbjct: 1214 ELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCH 1273

Query: 809  SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +F KLVS +  R IIVRD NRFH F++G+CSC D+W
Sbjct: 1274 TFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309



 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 218/576 (37%), Positives = 323/576 (56%), Gaps = 34/576 (5%)

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           ISA    +NL    +V A     GM  N ++ N L+  Y    A+D A  LF     R+ 
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  + ++  + ++G          E++  G RPD  T+   + A   L +L  GR+ H  
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           V + GL+    +C  ++DMY+KC                                ++E A
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCR-------------------------------EIEDA 214

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           R +F +M  RD ++W  M+GG  +     E++ LF  M  E +  D+V MV V  AC  L
Sbjct: 215 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 274

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
           GA+  A+ I  YI++     D+ L TA++DM+A+CG  + A ++F RME+++V +W+A I
Sbjct: 275 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 334

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
            A    G G +A++LF  ML  G+ PD I    +L ACSH GLV +G   F SM + + V
Sbjct: 335 AAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSV 394

Query: 606 SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAE 665
              + HY C+VDLLGRAG L EAL LIKSM +E ++ +WG+ L AC+ H++V +A  AA 
Sbjct: 395 RTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAAT 454

Query: 666 RITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFT 725
            + EL  +  G +VLLSNIYA+AG+W +VA++R  M ++ ++K PG + IEV+ K H+F+
Sbjct: 455 SLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFS 514

Query: 726 SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
            GD +HP    I  ML+ ++ +L   GYVPD   VL DVDE+ K  +L  HSEKLA+AFG
Sbjct: 515 VGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFG 574

Query: 786 LISTSKTMPIRVVKNLR---LCCDCHSFAKLVSKVY 818
           LI+T +  PIR++KNLR   L  + H  + +V+ VY
Sbjct: 575 LIATPEHTPIRIIKNLREKKLYLELHVHSSIVNLVY 610



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 200/408 (49%), Gaps = 35/408 (8%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           F ++A        +  QVH      G   ++ V N LI FY     + D   +FD M  R
Sbjct: 64  FYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 123

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + VSW+ ++   A+          F E++  G +P++ T+  VI AC  L+NL++G  + 
Sbjct: 124 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH 183

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
             + + G+  +  +  ALVDMY+KC  ++ A+ LF + ++R+LV    ++  Y   G A 
Sbjct: 184 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 243

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-M 381
           E+L + ++M   G  PD+V M++ V A A+LG +   R+   Y+ R   +  D I  T M
Sbjct: 244 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ-LDVILGTAM 302

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           IDMY KCG  E A  IFD M  K V+SW+++IA    +G             GR      
Sbjct: 303 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ------------GR------ 344

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEK 500
                        +A++LF +MLS  +  D++T+  +  AC + G ++   ++  +  E 
Sbjct: 345 -------------KALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWED 391

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
             +  D++  T +VD+  R G    A+++ + M  ++D   W A +GA
Sbjct: 392 YSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGA 439



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 25/412 (6%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I +L NC+ L +++Q H      G+       +K++   +    + +L  A   FD    
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSY---YRALDDAYGLFDGMCV 122

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S     ++ ++ G++ +G  +     + EL   G  PD +T PFV+ AC       
Sbjct: 123 RDSVS-----WSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ 177

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G  +H  + K G D D FV   L++ Y +C +I D R +FD+M ER++V+WT +I   A
Sbjct: 178 MGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYA 237

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                 E++ LF +M EEG+ P+ V MV V+ ACAKL  +     +  YI     + + +
Sbjct: 238 ECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVI 297

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  A++DMY KCG V++A+++F   +++N++  + +++ Y   G  R+AL +   ML  G
Sbjct: 298 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSG 357

Query: 336 PRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
             PD++T+ S + A +  G +  G      M   Y +R  ++ +  +    +D+  + G+
Sbjct: 358 MLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCV----VDLLGRAGR 413

Query: 391 QEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDV-------ESAREVFSEMPG 434
            + A ++   M+  K    W + +     + DV        S  E+ S+ PG
Sbjct: 414 LDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPG 465



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 192/392 (48%), Gaps = 35/392 (8%)

Query: 159  QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            QVH      G  +++ V N L+ FY     + D   +FD M  R+ VSW+ ++   A+  
Sbjct: 756  QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 815

Query: 219  LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
                    F E++  G +P++ T+  VI AC  L+NL++G  +   + + G+  +  +  
Sbjct: 816  DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 875

Query: 279  ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            ALVDMY KC  ++ A+ LF +  +R+LV    ++  Y   G A E+L + D+M   G  P
Sbjct: 876  ALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVP 935

Query: 339  DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRI 397
            D+V M++ V A A+LG +   R    Y+ R   +  D I  T MIDM+ KCG  E A  I
Sbjct: 936  DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQ-LDVILGTAMIDMHAKCGCVESAREI 994

Query: 398  FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
            FD M  K V+SW+++IA    +G             GR                   +A+
Sbjct: 995  FDRMEEKNVISWSAMIAAYGYHGQ------------GR-------------------KAL 1023

Query: 458  ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDM 516
            +LF +ML   I  +++T+V +  AC + G ++     ++ + E   +  D++  T +VD+
Sbjct: 1024 DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDL 1083

Query: 517  FARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
              R G    A+++   M  ++D   W A +GA
Sbjct: 1084 LGRAGRLDEALKLIXSMTXEKDEGLWGAFLGA 1115



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 174/333 (52%), Gaps = 10/333 (3%)

Query: 106  YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
            ++ ++ G++ +G  +     + EL   G  PD +T PFV+ AC        G  +H  + 
Sbjct: 804  WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVY 863

Query: 166  KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
            K G D D FV   L++ YG+C +I D R +FD+M ER++V+WT +I   A      E++ 
Sbjct: 864  KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLV 923

Query: 226  LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            LF +M EEG+ P+ V MV V+ ACAKL  +     +  YI     + + ++  A++DM+ 
Sbjct: 924  LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 983

Query: 286  KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
            KCG V++A+++F   +++N++  + +++ Y   G  R+AL +   ML  G  P+++T++S
Sbjct: 984  KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 1043

Query: 346  AVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
             + A +  G +  G      M   Y +R  ++ +  +    +D+  + G+ + A ++   
Sbjct: 1044 LLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCV----VDLLGRAGRLDEALKLIXS 1099

Query: 401  MS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            M+  K    W + +     + DV  A +  + +
Sbjct: 1100 MTXEKDEGLWGAFLGACRTHKDVXLAEKAATSL 1132



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 106/205 (51%), Gaps = 1/205 (0%)

Query: 93   YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
            ++ D      L  +  +I GY+  G   E++ L+ ++   G++PDK     V+ AC K  
Sbjct: 892  FLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG 951

Query: 153  AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
            A  +   +   I +  F  DV +   +I+ + +CG +   R +FD M E+NV+SW+++I 
Sbjct: 952  AMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIA 1011

Query: 213  ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMK 271
            A       ++A+ LF  M+  GI PN +T+V ++ AC+    +E G R  + + ++  ++
Sbjct: 1012 AYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVR 1071

Query: 272  ANALMVNALVDMYMKCGAVDTAKQL 296
             +      +VD+  + G +D A +L
Sbjct: 1072 XDVKHYTCVVDLLGRAGRLDEALKL 1096



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 100/229 (43%), Gaps = 17/229 (7%)

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           +G+  ++ +A  LV  ++       A  +F  M  RD  +W+  +G  A  G+       
Sbjct: 764 HGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGT 823

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC--MVDL 618
           F E++R G +PD+     V+ AC     +  G  L   +    G+   + H+ C  +VD+
Sbjct: 824 FRELIRCGARPDNYTLPFVIRACRDLKNLQMG-RLIHHIVYKFGLD--LDHFVCAALVDM 880

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE--LDPEKSG 676
            G+   + +A  L   M  E + V W  ++    +  N + +    +++ E  + P+K  
Sbjct: 881 YGKCREIEDARFLFDKM-XERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDK-- 937

Query: 677 VHVLLSNIYASAGKWTNVARVR-----LQMKEQGIRKLPGSSSIEVNGK 720
             V +  +  +  K   + + R     +Q K+  +  + G++ I+++ K
Sbjct: 938 --VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAK 984


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/612 (37%), Positives = 356/612 (58%), Gaps = 34/612 (5%)

Query: 228 FEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAY-IDELGMKANALMVNALVDMYM 285
            ++++ G + P+      ++  C +L  +E G  V A+ +D   +  + ++ N +V+MY 
Sbjct: 75  LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +D A+++F E   +++V    +++ + +    R+AL +  +ML  G +P+  T+ S
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSS 194

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + AS     L  G   H + L+ G +    + + ++DMY +CG          HM    
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCG----------HM---- 240

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                            ++A+  F  MP +  +SWN ++ G  ++   E A+ L   M  
Sbjct: 241 -----------------DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQR 283

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           +  +    T   V SAC  +GAL+  KW++A++ K+G+     +   L+DM+A+ G    
Sbjct: 284 KNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDD 343

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A +VF R+ K DV +W   +   A  G G++ ++ F +MLR GI+P+ I F+ VLTACSH
Sbjct: 344 AKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSH 403

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GL+++G + F  M   + V P + HY   VDLLGR GLL  A   I+ MP+EP   +WG
Sbjct: 404 SGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWG 462

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL AC+ H+N+++  YAAER  ELDP  SG  +LLSNIYASAG+W +VA+VR  MKE G
Sbjct: 463 ALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESG 522

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K P  S +E+   VH F + DE+HP +  I     E++ ++++ GYVPD ++VLL VD
Sbjct: 523 VKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVD 582

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           +QE++  L +HSEKLA+AF L++T    PIR+ KN+R+C DCH+  K VSKV DREIIVR
Sbjct: 583 QQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVR 642

Query: 826 DNNRFHFFRQGS 837
           D NRFH FR GS
Sbjct: 643 DTNRFHRFRDGS 654



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 234/472 (49%), Gaps = 38/472 (8%)

Query: 91  DYYIKDNETSAT-LFMYNSLIR-GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC 148
           D  ++D + ++  +F    L+R   S  G G+ A+ L   +    ++PD   +  +L  C
Sbjct: 41  DSEVEDGDAASFCVFQDKDLLRKSQSDGGTGLYALDL---IQRGSLVPDYNLYSKLLKEC 97

Query: 149 TKSSAFGEGVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
           T+     +G  VH  +V   F D  + ++N ++N Y +CG + D RR+FDEM  +++V+W
Sbjct: 98  TRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTW 157

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
           T+LI   ++ + P++A+ LF +M+  G +PN  T+  ++ A      L+ G ++ A+  +
Sbjct: 158 TALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK 217

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
            G +++  + +ALVDMY +CG +D A+  F     ++ V  N ++S + R G    AL +
Sbjct: 218 YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHL 277

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           L +M     +P   T  S +SA A +G L  G+  H +++++GL+    I NT++DMY K
Sbjct: 278 LWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAK 337

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
            G  + A R+FD +    VVSWN                               TML G 
Sbjct: 338 AGSIDDAKRVFDRLVKPDVVSWN-------------------------------TMLTGC 366

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
            Q  + +E ++ F  ML   I+ + ++ + V +AC + G LD   + +  ++K  +  D+
Sbjct: 367 AQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDV 426

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGNGEQAV 558
                 VD+  R G   RA +  R M     +A W A +GA  M  N E  V
Sbjct: 427 PHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGV 478



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 15/181 (8%)

Query: 35  SIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           SIG+L+  K +      H H++K GL       + ++   A+ G+ +    A++ FD  +
Sbjct: 302 SIGALEQGKWV------HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDD---AKRVFDRLV 352

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
           K +  S     +N+++ G +  GLG E +  + ++   GI P++ +F  VL AC+ S   
Sbjct: 353 KPDVVS-----WNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLL 407

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICA 213
            EG+     + K   + DV      ++  G  G +    R   EM  E     W +L+ A
Sbjct: 408 DEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGA 467

Query: 214 C 214
           C
Sbjct: 468 C 468


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/555 (40%), Positives = 342/555 (61%), Gaps = 34/555 (6%)

Query: 293 AKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSAS 350
           A ++F +  K  N+ + NT++  Y  +G +  A+++  EM   G   PD  T    + A 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
            ++ D+  G   H  V+R+G      + N+++ +Y  CG                     
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG--------------------- 170

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                     DV SA +VF +MP +D ++WN+++ G  +    EEA+ L+  M  + IK 
Sbjct: 171 ----------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKP 220

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           D  T+V + SAC  +GAL L K  + Y+ K G+  ++  +  L+D++ARCG  + A  +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGGLV 589
             M  ++  +WT+ I  +A+ G G++A+ELF  M  ++G+ P  I FVG+L ACSH G+V
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMV 340

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +G+  FR M++ + + P+I H+GCMVDLL RAG + +A + I  MP++PN VIW +LL 
Sbjct: 341 KEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLG 400

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC  H + D+A  A  +I +L+P  SG +VLLSN+YAS  +W++V ++R QM   G+RK+
Sbjct: 401 ACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKV 460

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S +EV  +VHEF  GD+SHP+ + I + L+EM  RLR  GYVP ++NV +DV+E+EK
Sbjct: 461 PGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEK 520

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +  L +HSEK+A+AF LIST +  PIRVVKNL++C DCH   KLVSKVY+REI+VRD +R
Sbjct: 521 ENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSR 580

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+ GSCSC D+W
Sbjct: 581 FHHFKNGSCSCQDYW 595



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 205/391 (52%), Gaps = 17/391 (4%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISK-VVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           +L +L+Q H   ++ G+    + + K ++     + +   ++YA K F       E    
Sbjct: 29  SLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFS----KIEKPIN 84

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVH 161
           +F++N+LIRGY+ IG  V A+SLY E+   G + PD  T+PF+L A  K +    G  +H
Sbjct: 85  VFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIH 144

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             +++ GF   ++V+N L++ Y  CGD+    +VFD+M E+++V+W S+I   A    P+
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ L+ EM  +GIKP+  T+V ++SACAK+  L LG R   Y+ ++G+  N    N L+
Sbjct: 205 EALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLL 264

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LLHGPRPDR 340
           D+Y +CG V+ AK LF E  D+N V   +++      GL +EA+ +   M    G  P  
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCE 324

Query: 341 VTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           +T +  + A +  G +  G     RM   Y +   +E +      M+D+  + G+ + A 
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHF----GCMVDLLARAGQVKKAY 380

Query: 396 RIFDHMS-NKTVVSWNSLIAGLIKNGDVESA 425
                M     VV W +L+     +GD + A
Sbjct: 381 EYILKMPMQPNVVIWRTLLGACTVHGDSDLA 411



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 186/371 (50%), Gaps = 36/371 (9%)

Query: 192 GRRVFDEMSER-NVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISAC 249
             +VF ++ +  NV  W +LI   A       AV L+ EM   G ++P++ T   ++ A 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
            K+ ++ LG+ + + +   G  +   + N+L+ +Y  CG V +A ++F +  +++LV  N
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++++ +   G   EALA+  EM L G +PD  T++S +SA A++G L  G+  H Y+++ 
Sbjct: 192 SVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV 251

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL       N ++D+Y +CG+ E A  +FD M +K  VSW SLI GL  NG         
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG--------- 302

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS-ERIKVDRVTMVGVASACGYLGAL 488
                         LG        +EA+ELF+ M S E +    +T VG+  AC + G +
Sbjct: 303 --------------LG--------KEAIELFKNMESKEGLLPCEITFVGILYACSHCGMV 340

Query: 489 DLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIG 546
               ++     E+  I   ++    +VD+ AR G  ++A +   +M  + +V  W   +G
Sbjct: 341 KEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLG 400

Query: 547 AMAMEGNGEQA 557
           A  + G+ + A
Sbjct: 401 ACTVHGDSDLA 411


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/694 (35%), Positives = 386/694 (55%), Gaps = 34/694 (4%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-- 234
           N  I      G+I   R  F+ M  R   S+ +L+    R  LP  A+ LF  M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 235 -----IKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL------GMKANALMV------ 277
                I   S+    +  A A L ++     V ++   L      G+ A+A+ +      
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 278 ------NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
                   L+   +  G V+ A++LF E  DR++V    ++S Y + G   EA A+ DEM
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
               P+ + V+  + +S  AQ G++   R     +       W      M+  Y++ G  
Sbjct: 201 ----PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW----TAMLVGYIQAGHV 252

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           E A  +F+ M    V + N+++ G  + G V++A+ VF +M  RD  +W+ M+    Q  
Sbjct: 253 EDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNE 312

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  FR ML   ++ +  +++ + + C  L  LD  + ++A + +     D+   +
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL+ M+ +CG+  +A +VF   E +D+  W + I   A  G GEQA+ +F++M   G+ P
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSP 432

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I ++G LTACS+ G V +G  +F SMT    + P   HY CMVDLLGR+GL+ EA DL
Sbjct: 433 DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL 492

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           IK+MPVEP+ VIWG+L+ AC+ H+N +IA +AA+++ EL+P  +G +VLLS+IY S G+W
Sbjct: 493 IKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRW 552

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE-SHPEMNNISSMLREMNCRLRD 750
            + +++R  +  + + K PG S IE + +VH FTSGD  +HPE   I  +L +++  L +
Sbjct: 553 EDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLME 612

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           +GY  D + VL D+DE++K + L +HSE+ A+A+GL+   + MPIRV+KNLR+C DCHS 
Sbjct: 613 SGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSA 672

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KL++K+  REII+RD NRFH F+ G CSC D+W
Sbjct: 673 IKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 205/457 (44%), Gaps = 55/457 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHGA 163
           + SL+RGY   GL  +AI L+ ++      P++   ++  +L     +    E  ++   
Sbjct: 115 FTSLLRGYVRHGLLADAIRLFQQM------PERNHVSYTVLLGGLLDAGRVNEARRLFDE 168

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +     DRDV     +++ Y + G I + R +FDEM +RNVVSWT++I   A+      A
Sbjct: 169 MP----DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLA 224

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA-NALMVNALVD 282
             LF  M E     N V+   ++    +  ++E    +   + E  + A NA+MV     
Sbjct: 225 RKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG---- 276

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            + + G VD AK +F +  +R+    + ++  Y +     EAL+   EML  G RP+  +
Sbjct: 277 -FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPS 335

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           ++S ++  A L  L  GR  H  +LR   +      + +I MY+KCG  + A R+F    
Sbjct: 336 VISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K +V WNS+I G  ++G  E A  +F +M           L G++              
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDM----------RLAGMSP------------- 432

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG 521
                   D +T +G  +AC Y G +   + I+  +  N  I    +  + +VD+  R G
Sbjct: 433 --------DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
             + A  + + M  + D   W A +GA  M  N E A
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           + M+NS+I GY+  GLG +A+ ++ ++   G+ PD  T+   L AC+ +    EG ++  
Sbjct: 399 IVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFN 458

Query: 163 AI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
           ++ V           +C+++  G  G + +   +   M  E + V W +L+ AC
Sbjct: 459 SMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/727 (34%), Positives = 399/727 (54%), Gaps = 50/727 (6%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI+ DKF    ++ ACTK  A  EG ++H  ++  GF  D+ +E  L+  Y +CG + D 
Sbjct: 5   GIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDA 64

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           +RVF+ M  +++ +W+S+I A AR    + AV L+  M+ EG++PN VT  C +  CA +
Sbjct: 65  KRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASV 124

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             L  G  +   I    +  + ++ ++L++MY+KC  +  A+++F   K RN+     ++
Sbjct: 125 AGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMI 184

Query: 313 SNYVRLGLAREALAILDEM-LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           S YV+ G   EAL +   M  +    P+  T  + + A   LG+L  GR  H ++   G 
Sbjct: 185 SAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGF 244

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           +    + N ++ MY KCG                                VE AR+VF  
Sbjct: 245 DTNVVVQNALVTMYGKCGSP------------------------------VE-ARKVFDS 273

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           M  R+ ISW +M+    Q    +EA+ LF+ M    ++   V+     +AC  LGALD  
Sbjct: 274 MTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEG 330

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           + I+  + +  +    Q+ T+L+ M+ARCG    A +VF RM+ RD  +  A I A    
Sbjct: 331 REIHHRVVEAHL-ASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQH 389

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G  +QA+ ++  M ++GI  D I FV VL ACSH  LV      F+S+   HGV P + H
Sbjct: 390 GRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEH 449

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y CMVD+LGR+G LG+A +L+++MP + + V W +LL+ C++H +++    AA ++ EL 
Sbjct: 450 YLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELA 509

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG---- 727
           P ++  +V LSN+YA+A ++ +  RVR +M+E+G+      S IE++ ++H FTSG    
Sbjct: 510 PAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDE 569

Query: 728 -DESHP--EMNNISSMLREMNCRLRDAGYVPDLTNVLLD----VDEQEKKYLLSHHSEKL 780
             E H    M  + S+L E+   ++ AGYVPD   V L+      E+EK+  L  HSE+L
Sbjct: 570 QQEGHDGRTMERVRSLLLELLEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERL 629

Query: 781 AMAFGLISTS---KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           A+A+GLI+      + P+RVV + R+C DCHS  KL+S + ++ I VRD NRFH F +G+
Sbjct: 630 AIAYGLIAAKDPDDSRPLRVVNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGA 689

Query: 838 CSCSDFW 844
           CSC D W
Sbjct: 690 CSCGDHW 696



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 248/536 (46%), Gaps = 51/536 (9%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD-YYI 94
           + +    + L E ++ H H++  G        + ++   A+ G   SL  A++ F+   I
Sbjct: 17  VAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCG---SLDDAKRVFEGMEI 73

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
           KD      LF ++S+I  Y+  G G  A+ LY  +   G+ P+  TF   L  C   +  
Sbjct: 74  KD------LFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGL 127

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
            +G  +H  I+     +D  +++ L+N Y +C ++V+ R+VF+ M  RNV S+T++I A 
Sbjct: 128 ADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAY 187

Query: 215 ARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            +     EA+ LF  M + E I+PN+ T   ++ A   L NLE G +V  ++   G   N
Sbjct: 188 VQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTN 247

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
            ++ NALV MY KCG+   A+++F     RN++   ++++ Y + G  +EAL +   M +
Sbjct: 248 VVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDV 307

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
               P  V+  SA++A A LG L  GR  H  V+   L     +  +++ MY +CG  + 
Sbjct: 308 E---PSGVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLLSMYARCGSLDD 363

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A R+F+ M  +   S N++IA                                 TQ    
Sbjct: 364 ARRVFNRMKTRDAFSCNAMIA-------------------------------AFTQHGRK 392

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATA 512
           ++A+ ++R M  E I  D +T V V  AC +   + D   +  + +  +G+   ++    
Sbjct: 393 KQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLC 452

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           +VD+  R G    A ++   M  + D  AW   +      G+   GE+A     E+
Sbjct: 453 MVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFEL 508



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 204/425 (48%), Gaps = 36/425 (8%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M E GI  +   +  +++AC KLQ LE G R+  ++   G + +  +  AL+ MY KCG+
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D AK++F   + ++L   ++I+S Y R G    A+ +   M+  G  P+ VT   A+  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            A +  L  GR  H  +L + +   D + +++++MY+KC +   A ++F+ M  + V S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            ++I+  ++ G+   A E+FS M   + I  N                            
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAY-------------------------- 214

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
               T   +  A   LG L+  + ++ ++   G   ++ +  ALV M+ +CG P  A +V
Sbjct: 215 ----TFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKV 270

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M  R+V +WT+ I A A  GN ++A+ LF  M    ++P  + F   L AC+  G +
Sbjct: 271 FDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGAL 327

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++G  +   + + H  SPQ+     ++ +  R G L +A  +   M    +     +++A
Sbjct: 328 DEGREIHHRVVEAHLASPQM--ETSLLSMYARCGSLDDARRVFNRMKTR-DAFSCNAMIA 384

Query: 650 ACQKH 654
           A  +H
Sbjct: 385 AFTQH 389


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/748 (33%), Positives = 404/748 (54%), Gaps = 33/748 (4%)

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
           +++ ++ ++I G S  G   E + ++ ++   G+  ++ T+  ++  C    A  EG  +
Sbjct: 223 SSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMI 282

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
              I++  F     +   LI+ YG+CG +   + + + M +R+VV+W +++ ACA+    
Sbjct: 283 DARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDN 342

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NA 279
            EA++L   M  EG   N VT + V+ ACA L+ L  G  + A +   G+    + V N+
Sbjct: 343 WEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNS 402

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           ++ MY KCG  + A  +F     ++ V  N +++  V     ++AL +   M L G R +
Sbjct: 403 VITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSN 462

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE-GWDSICNTMIDMYMKCGKQEMACRIF 398
             T+LS + A   L DL   R  H      G      ++ N++++MY +CG    A + F
Sbjct: 463 EFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAF 522

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           D +  K +V+W+ ++A   ++ D           PGR                    A +
Sbjct: 523 DSLEEKGLVAWSIILAAYAQSKD----------GPGR-------------------RAFK 553

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMF 517
            F+ M +E IK   VT V    AC  +  L+  + ++     +G +   + L   +++M+
Sbjct: 554 FFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMY 613

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            +CG P  A  VF +M ++ + +W + I A A  G+  +A+    EML QG  PDS   V
Sbjct: 614 GKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSV 673

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            +L   SH GL+ +G   FRS    HG+ P      C+VDLL R G L  A +LI + P 
Sbjct: 674 SILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPA 733

Query: 638 EPNDVI-WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
              D I W +LLAAC+ + +       AER+ EL+P+ SG  V+L+N+YAS G+W++ +R
Sbjct: 734 CQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASR 793

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R  M+   ++K PG S IE++G VHEF SG+  HP++  I   L ++  R+R+AGYVPD
Sbjct: 794 IRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPD 853

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
            TNV+ DV+E +K+ +LS HSE+LA+ FGL+ST     IRVVKNLR+C DCH+  K++S 
Sbjct: 854 TTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISS 913

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           V  REI+VRD++RFH F+ G CSC DFW
Sbjct: 914 VVGREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/494 (28%), Positives = 243/494 (49%), Gaps = 34/494 (6%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D  ++  +F +  ++  YS  G   EA+ L+  +   G  PDK  F   L+AC  S    
Sbjct: 16  DGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELD 75

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G Q+H ++V  G   ++ + N L+N YG+C D+    +VFD M  R+VVSWT+++   A
Sbjct: 76  HGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYA 135

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +     +A+     M  EG+KPN VT V ++  CAKL+ L+LG ++   I   G++ + +
Sbjct: 136 QNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGI 195

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + NALV MY  CG+ D  K +F      +++L  T+++   + G   E L +  +M L G
Sbjct: 196 LGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEG 255

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            + + VT +S V     L  +  G M    +L +       +  ++I +Y +CG  + A 
Sbjct: 256 VKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAK 315

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            + +HM  + VV+WN+++    +NGD                 +W              E
Sbjct: 316 GLLEHMYQRDVVAWNAMVTACAQNGD-----------------NW--------------E 344

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALV 514
           A+ L R M  E    ++VT + V  AC  L AL   + I+A +   G +  ++ +  +++
Sbjct: 345 AIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVI 404

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            M+ +CG  + AM VF  M ++D  +W A I A       + A+ELF+ M  +G++ +  
Sbjct: 405 TMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEF 464

Query: 575 VFVGVLTACSHGGL 588
             + +L AC  GGL
Sbjct: 465 TLLSLLEAC--GGL 476



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 229/469 (48%), Gaps = 32/469 (6%)

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            YG+C  + D   VFD +S +NV SWT ++ A ++    +EA+ LF  M  EG +P+ V 
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
            V  + ACA    L+ G ++ + +   G+ +N ++ N+LV+MY KC  V  A+++F    
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
            R++V    +++ Y + G   +AL  L  M   G +P++VT ++ V   A+L  L  GR 
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H  ++  GLE    + N ++ MY  CG  +    +F  M   +V+ W ++IAG  +NG 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
                                          +EE + +FR M  E +K + VT + +   
Sbjct: 241 -------------------------------YEEGLLVFRKMDLEGVKANEVTYMSMVEV 269

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  L A+   + I A I ++       LAT+L+ ++ +CG   RA  +   M +RDV AW
Sbjct: 270 CRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAW 329

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            A + A A  G+  +A+ L   M  +G   + + ++ VL AC++   ++QG  +   +  
Sbjct: 330 NAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLL 389

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
              +  ++     ++ + G+ G    A+ + ++MP   +DV W +++ A
Sbjct: 390 CGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMP-RKDDVSWNAVINA 437



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 183/398 (45%), Gaps = 43/398 (10%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KC  V  A  +F     +N+     +M+ Y + G  REAL +   M   G RPD+V 
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            + A+ A A  G+L  GR  H  V+ +GL     I N++++MY KC     A ++FD M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            + VVSW +++A   +NG                   W+             +A+E    
Sbjct: 121 LRDVVSWTAMLAVYAQNG------------------CWS-------------QALECLSR 149

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           M +E +K ++VT V +   C  L  LDL + I+  I   G+  D  L  ALV M+  CG 
Sbjct: 150 MDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGS 209

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
                 VF RM +  V  WT  I   +  G  E+ + +F +M  +G+K + + ++ ++  
Sbjct: 210 FDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEV 269

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           C +   V +G  +   + +    S  ++    ++ L G+ G+L  A  L++ M  + + V
Sbjct: 270 CRNLDAVKEGEMIDARILESPFCSSTLLATS-LISLYGQCGILDRAKGLLEHM-YQRDVV 327

Query: 643 IWGSLLAACQKH----------QNVDIAAYAAERITEL 670
            W +++ AC ++          + +D+  + A ++T L
Sbjct: 328 AWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYL 365


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/743 (33%), Positives = 395/743 (53%), Gaps = 67/743 (9%)

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNVVSWTSLICACARRDLPKEAVYLF 227
            DRD  V N L+  Y  CG +   R VFD M   R++VSWT++    AR    + ++ L 
Sbjct: 80  LDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLI 139

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQ-NLELGDRVCAYIDELGMKANALMV-NALVDMYM 285
            EM+E G+ PN+ T+     AC   +    +G  V   + ++G+    + V +AL+DM  
Sbjct: 140 GEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLA 199

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G + +A+++F    ++ +V+   ++S YV+   A EA+ +  + L  G  PDR TM S
Sbjct: 200 RNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSS 259

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG---KQEMACRIFDHMS 402
            +SA  +LG +  G   H   LR GL     +   ++DMY K       + A ++F+ M 
Sbjct: 260 MISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMP 319

Query: 403 NKTVVSWNSLIAGLIKNG------------------------------------DVESAR 426
              V+SW +LI+G +++G                                    D +S R
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGR 379

Query: 427 EVFSEM----PGRDHISWNTMLGGLTQENMFEEAMELFRVM----------------LSE 466
           +V + +        H   N ++    +    EEA  +F  +                L  
Sbjct: 380 QVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDH 439

Query: 467 RI-----KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           RI      +   T   + SA   +G L   + ++A   K G   D  ++ +LV M++RCG
Sbjct: 440 RIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCG 499

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             + A + F  ++ R+V +WT+ I  +A  G  E+A+ LF++M+  G+KP+ + ++ VL+
Sbjct: 500 YLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLS 559

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV +G   FRSM   HG+ P++ HY CMVDLL R+G++ EAL+ I  MP++ + 
Sbjct: 560 ACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADA 619

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           ++W +LL AC+ H N+++    A+ + EL+P     +VLLSN+YA AG W  VAR+R  M
Sbjct: 620 LVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAM 679

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           ++  + K  G S +EV    HEF +GD SHP   +I   L  +  +++  GYVPD + VL
Sbjct: 680 RDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVL 739

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            D+ ++ K+  L  HSEK+A+AFGLI+TS   PIR+ KNLR+C DCHS  K +SK   RE
Sbjct: 740 HDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRRE 799

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           II+RD+NRFH  + G CSC ++W
Sbjct: 800 IILRDSNRFHRMKDGECSCGEYW 822



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 233/483 (48%), Gaps = 60/483 (12%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+K FD  I+      T+ ++  LI  Y       EA+ L+++    G  PD++T  
Sbjct: 204 LASARKVFDGLIEK-----TVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMS 258

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC--GDIVD-GRRVFDEM 199
            +++ACT+  +   G+Q+H   ++MG   D  V   L++ Y +   G  +D   +VF+ M
Sbjct: 259 SMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERM 318

Query: 200 SERNVVSWTSLICACARRDLPKEAVY-LFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
            + +V+SWT+LI    +  + +  V  LF EM+ E IKPN +T   ++ +CA + + + G
Sbjct: 319 PKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSG 378

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            +V A++ +    +   + NALV MY + G ++ A+++F +  +R+++ C T   ++   
Sbjct: 379 RQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFP-- 436

Query: 319 GLAREALAILDEMLLHGPRPD----RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
                    LD  ++   R D      T  S +SA+A +G L  G+  H   L+ G    
Sbjct: 437 ---------LDHRIV---RMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSD 484

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N+++ MY +CG  E ACR F+ + ++ V+SW S+I+GL K+G              
Sbjct: 485 RFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHG-------------- 530

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
                              E A+ LF  M+   +K + VT + V SAC ++G +   K  
Sbjct: 531 -----------------YAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEY 573

Query: 495 YAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEG 552
           +  ++++ G+   M+    +VD+ AR G  + A++    M  K D   W   +GA     
Sbjct: 574 FRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHD 633

Query: 553 NGE 555
           N E
Sbjct: 634 NIE 636



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 193/421 (45%), Gaps = 50/421 (11%)

Query: 39  LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           +  C  L  ++   Q H   L+ GL         +V   A+    +++ YA K F+   K
Sbjct: 261 ISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPK 320

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAI-SLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
           ++  S     + +LI GY   G+    + +L+ E+    I P+  T+  +L +C   S  
Sbjct: 321 NDVIS-----WTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDH 375

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G QVH  ++K        V N L++ Y E G + + RRVF+++ ER+++      C  
Sbjct: 376 DSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIP-----CIT 430

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
             RD P     L   +V   +  +S T   +ISA A +  L  G ++ A   + G  ++ 
Sbjct: 431 EGRDFP-----LDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDR 485

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + N+LV MY +CG ++ A + F E KDRN++   +++S   + G A  AL++  +M+L 
Sbjct: 486 FVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILT 545

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G +P+ VT ++ +SA + +G           ++R G E + S+                 
Sbjct: 546 GVKPNDVTYIAVLSACSHVG-----------LVREGKEYFRSMQR--------------- 579

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQENMF 453
               DH     +  +  ++  L ++G V+ A E  +EMP + D + W T+LG     +  
Sbjct: 580 ----DHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNI 635

Query: 454 E 454
           E
Sbjct: 636 E 636


>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
          Length = 539

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/513 (42%), Positives = 319/513 (62%), Gaps = 3/513 (0%)

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G  P+R T +    A      +L G     + ++ GLE    + N MI MY   G  + A
Sbjct: 27  GFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEA 86

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            R+FD   ++ + SWN +I G + +G++  A+E+F EM  RD +SW T++ G  Q   F+
Sbjct: 87  RRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFK 146

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           EA++LF  ML      +  T+    +AC  L ALD  +WI+ YI+K+ I  + +L  +L+
Sbjct: 147 EALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLL 206

Query: 515 DMFARCGDPQRAMQVFRRME--KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           DM+A+CG+   A +VF      K  V  W A IG  AM G  ++A++LF +M  + + P+
Sbjct: 207 DMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPN 266

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + FV +L ACSHG LV +G   F+SM   +G+ P+I HYGCMVDLLGR+GLL EA + +
Sbjct: 267 KVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETV 326

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
            +MP+ P+  IWG+LL AC+ H++++      + I ELD +  G HVLL+N+Y+++G+W 
Sbjct: 327 FNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWD 386

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
               VR +++  G +K PG SSIE+NG  H+F  GD SHP+   +   L EM  +L++AG
Sbjct: 387 EAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAG 446

Query: 753 YVPDLTNVLLDV-DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
           YVP+   VLLD+ DE++K+  LS HSEKLA+AFGLI+T     IR+VKNLR+C DCH   
Sbjct: 447 YVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEAT 506

Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           K +SKVY REIIVRD  R+H F+ G CSC D+W
Sbjct: 507 KFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 170/357 (47%), Gaps = 47/357 (13%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G LP+++TF FV  AC       EG Q+    +K+G + ++FV N +I  Y   G + + 
Sbjct: 27  GFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEA 86

Query: 193 RRVFD-------------------------------EMSERNVVSWTSLICACARRDLPK 221
           RRVFD                               EMSER+VVSWT++I    +    K
Sbjct: 87  RRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFK 146

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ LF EM++ G  PN  T+   ++ACA L  L+ G  +  YID+  +K N  ++ +L+
Sbjct: 147 EALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLL 206

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVL--CNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           DMY KCG +D A ++F +     L +   N ++  Y   G ++EA+ + ++M +    P+
Sbjct: 207 DMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPN 266

Query: 340 RVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCG-KQEM 393
           +VT ++ ++A +    +  GR     M   Y +   +E +      M+D+  + G  +E 
Sbjct: 267 KVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHY----GCMVDLLGRSGLLKEA 322

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR---EVFSEMPGRDHISWNTMLGGL 447
              +F+         W +L+     + D+E  +   ++  E+   DHI  + +L  L
Sbjct: 323 EETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDS-DHIGCHVLLANL 378



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 3/203 (1%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D  +   +  + ++I GY  +G   EA+ L+ E+   G  P++FT    L AC    A  
Sbjct: 122 DEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALD 181

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF-DEMSER-NVVSWTSLICA 213
           +G  +H  I K     +  +   L++ Y +CG+I    +VF DE   +  V  W ++I  
Sbjct: 182 QGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGG 241

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG-DRVCAYIDELGMKA 272
            A     KEA+ LF +M  E + PN VT V +++AC+  + +E G     +     G++ 
Sbjct: 242 YAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEP 301

Query: 273 NALMVNALVDMYMKCGAVDTAKQ 295
                  +VD+  + G +  A++
Sbjct: 302 EIEHYGCMVDLLGRSGLLKEAEE 324


>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/604 (39%), Positives = 354/604 (58%), Gaps = 16/604 (2%)

Query: 255 LELGDRVCAYIDELGMK--ANALMVNALVDMYMKCGAVDTAKQLFGEC--KDRNLVLCNT 310
           L  G  + A +   G+K    + + NAL   Y   G + TA++LF E    D++ V   T
Sbjct: 22  LHPGRELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIPLSDKDNVDWTT 81

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++S++ R GL   ++ +  EM       D V+++      A+L DL  G   HG  ++ G
Sbjct: 82  LLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRFGEQGHGVAVKMG 141

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
                 +CN ++DMY KCG      RIF  +  K+VVSW  ++  L+K   ++  REVF 
Sbjct: 142 FLTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKWEGLKRGREVFD 201

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALD 489
           EMP R+ ++W  M+ G        E +EL   M+      ++ VT+  + SAC   G L 
Sbjct: 202 EMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLV 261

Query: 490 LAKWIYAYIEKNGI-------HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
           + +W++ Y  K  +       +  + + TALVDM+A+CG+   +++VFR M KR+V  W 
Sbjct: 262 IGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLMRKRNVVTWN 321

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           A    +AM G G   +++F EM+R+ +KPD + F  +L+ACSH G+V++GW  F S+   
Sbjct: 322 ALFSGLAMHGKGRMVIDMFPEMVRE-VKPDDLTFTALLSACSHLGMVDEGWRCFHSL-QF 379

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           +G+ P++ HY CMVD+LGRAG + EA  L++ MPV PN+V+ GSLL +C  H  ++IA  
Sbjct: 380 YGLEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKLEIAER 439

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
               + ++ P  +   +L+SN+Y + G+      +R  ++ +GIRK+PG SSI VN  VH
Sbjct: 440 IKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRGSLRNRGIRKIPGLSSIYVNDSVH 499

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL--LDVDEQEKKYLLSHHSEKL 780
            F+SGD SHP    +   L E+  R+R AGYVPD++ ++   + D +EK+  L  HSEKL
Sbjct: 500 RFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPDISGLVSPSEGDLEEKEQALCCHSEKL 559

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+ FGL+ T    P+ V KNLR+C DCHS  K+VSKVYDREII+RD NRFH F+ GSCSC
Sbjct: 560 AVCFGLLETKPRTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSC 619

Query: 841 SDFW 844
           SD+W
Sbjct: 620 SDYW 623



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 195/434 (44%), Gaps = 75/434 (17%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDR--DVFVENCLINFYGECGDIVDGRRVFDE-- 198
            +L      S    G ++H  +   G  +    ++ N L  FY   G+I   +++FDE  
Sbjct: 11  LLLRQSAHRSFLHPGRELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIP 70

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           +S+++ V WT+L+ + +R  L   ++ LF EM  + ++ + V++VC+   CAKL++L  G
Sbjct: 71  LSDKDNVDWTTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRFG 130

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL---------------------- 296
           ++      ++G   +  + NAL+DMY KCG V   K++                      
Sbjct: 131 EQGHGVAVKMGFLTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKW 190

Query: 297 ---------FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSA 346
                    F E  +RN+V    +++ Y+  G  RE L +L EM+   G   + VT+ S 
Sbjct: 191 EGLKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGL-----EGWDSIC--NTMIDMYMKCGKQEMACRIFD 399
           +SA AQ G+L+ GR  H Y L+  +     E +D +     ++DMY KCG  + + ++F 
Sbjct: 251 LSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFR 310

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M  + VV+WN+L +GL  +G      ++F EM                           
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPEM--------------------------- 343

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
                   +K D +T   + SAC +LG +D     +  ++  G+   +     +VD+  R
Sbjct: 344 -----VREVKPDDLTFTALLSACSHLGMVDEGWRCFHSLQFYGLEPKVDHYACMVDILGR 398

Query: 520 CGDPQRAMQVFRRM 533
            G  + A  + R M
Sbjct: 399 AGRIEEAEILMREM 412



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 199/450 (44%), Gaps = 57/450 (12%)

Query: 45  LNELKQPHCHILKQGLGHKP-SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           L+  ++ H  +   GL   P SY+S  +       +   +  AQK FD     ++ +   
Sbjct: 22  LHPGRELHAVLTTSGLKKAPRSYLSNALFQF--YASSGEIATAQKLFDEIPLSDKDNVD- 78

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
             + +L+  +S  GL V ++ L+VE+    +  D  +   +   C K      G Q HG 
Sbjct: 79  --WTTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRFGEQGHGV 136

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVD-------------------------------G 192
            VKMGF   V V N L++ YG+CG + +                               G
Sbjct: 137 AVKMGFLTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKWEGLKRG 196

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAK 251
           R VFDEM ERNVV+WT ++         +E + L  EMV   G   N VT+  ++SACA+
Sbjct: 197 REVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256

Query: 252 LQNLELGDRVCAYIDELGM------KANALMV-NALVDMYMKCGAVDTAKQLFGECKDRN 304
             NL +G  V  Y  +  M        + +MV  ALVDMY KCG +D++ ++F   + RN
Sbjct: 257 SGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLMRKRN 316

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +V  N + S     G  R  + +  EM +   +PD +T  + +SA + LG +  G  C  
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPEM-VREVKPDDLTFTALLSACSHLGMVDEGWRCFH 375

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM---SNKTVVSWNSLIAGLIKNGD 421
            +   GLE        M+D+  + G+ E A  +   M    N+ V+   SL+     +G 
Sbjct: 376 SLQFYGLEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVL--GSLLGSCSVHGK 433

Query: 422 VESA----REVFSEMPGRDHISWNTMLGGL 447
           +E A    RE+    PG  H  +  ++  +
Sbjct: 434 LEIAERIKRELIQMSPG--HTEYQILMSNM 461


>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
 gi|194690792|gb|ACF79480.1| unknown [Zea mays]
          Length = 617

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/495 (44%), Positives = 310/495 (62%), Gaps = 1/495 (0%)

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           SA++   L     HG  +R G      + + ++ MY   G    +   F  ++   VV  
Sbjct: 124 SAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCV 183

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            +++A L   GDV++AR++F  MP RDH++W+ M+ G        EA+ LF  MLS    
Sbjct: 184 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTT 243

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           V   T+V V +AC  +G LD  KW++ Y+   G+   ++L TALVDM+++CG    AM+V
Sbjct: 244 VGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEV 303

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M +R+V  WT+A+  +AM G G + ++LF  M   GI+P+ + FV VL  CS  GLV
Sbjct: 304 FESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLV 363

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++G   F SM D +GV P   HYGCMVDL GRAG L +A+  I  MP+EP++ +WG+LL 
Sbjct: 364 DEGRACFDSM-DKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLN 422

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           A + H +VD+  YA +++  ++ E    HV LSNIYA +  W  V+RVR  MK +G++K+
Sbjct: 423 ASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKV 482

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S+IEV+GKVHEF  G   HP  N I  ML EM+ RLR  GY  +   VL D++E+EK
Sbjct: 483 PGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEK 542

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +  +S HSEKLA+AFGLI   + + IR+VKNLR+C DCH + KLVSKV++REI++RD NR
Sbjct: 543 EGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNR 602

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+ G CSC D+W
Sbjct: 603 FHHFKGGECSCRDYW 617



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 176/408 (43%), Gaps = 57/408 (13%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L +    + L+  H H++  G    PS+++  +   A + +   L+YA+          +
Sbjct: 13  LPSLAEASHLRALHAHLVVSGRLASPSHLAAFL---ASLASSNHLSYARLVLP------Q 63

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL------------- 145
             ATL  +N+ IR    +  G      +       + PD ++  F++             
Sbjct: 64  RPATLLAHNAFIR---ALARGPRPCLAFAAFRDLPLPPDHYSLNFLVRAATALVASAAEE 120

Query: 146 -NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD------------- 191
            +   + +A  + V  HGA V+ G   D  V++ +++ Y   GD+               
Sbjct: 121 KHVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDV 180

Query: 192 ------------------GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE 233
                              R +FD M +R+ V+W+++I         +EA+ LF EM+  
Sbjct: 181 VCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSA 240

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
           G      T+V V++ACA++  L+ G  V  Y+   GM+ +  +  ALVDMY KCGAV TA
Sbjct: 241 GTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTA 300

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
            ++F    +RN+    + +S     G+  E L +   M   G +P+ V+ ++ +   +  
Sbjct: 301 MEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMA 360

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           G +  GR C   + + G++ W      M+D+Y + G+ + A    + M
Sbjct: 361 GLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDM 408



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 31/245 (12%)

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           V A+V      G VD A+ LF     R+ V  + +++ Y+ +G +REAL + DEML  G 
Sbjct: 183 VTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGT 242

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
                T++S ++A AQ+G L  G+  H YV   G++    +   ++DMY KCG    A  
Sbjct: 243 TVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAME 302

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F+ M+ + V +W S ++GL  NG                               M  E 
Sbjct: 303 VFESMAERNVYTWTSAVSGLAMNG-------------------------------MGTEC 331

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           ++LF+ M    I+ + V+ V V   C   G +D  +  +  ++K G+    +    +VD+
Sbjct: 332 LQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDL 391

Query: 517 FARCG 521
           + R G
Sbjct: 392 YGRAG 396


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/767 (34%), Positives = 405/767 (52%), Gaps = 51/767 (6%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++  D   + N  S     +N LI  YS  GL   ++         G+  D+F++   L
Sbjct: 62  ARRLLDEMPRRNAVS-----FNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAAL 116

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC+++     G  VH   +  G    VFV N L++ Y +CG++ + RRVFD   ER+ V
Sbjct: 117 AACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDV 176

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN--LELGDRVCA 263
           SW SL+    R    +E V +F  M   G+  NS  +  VI  C+   +  +++ + V  
Sbjct: 177 SWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHG 236

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR----LG 319
            + + G+ ++  +V+A++DMY K GA+  A  LF   ++ N+V+ NT+++ + R    +G
Sbjct: 237 CVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIG 296

Query: 320 --LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
             +A EAL +  E+   G +P   T  S + A    G L  G+  HG V++   +  D I
Sbjct: 297 KEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFI 356

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            + +ID+Y   G  E   R                                F   P  D 
Sbjct: 357 GSALIDLYFNSGCMEDGFR-------------------------------CFRSSPKHDI 385

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           ++W  M+ G  Q  + E+A+ LF   L   +K D  T+  V +AC  L      + I  +
Sbjct: 386 VTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCF 445

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             K+G      +  + V M+AR GD   A + F+ ME  DV +W+A I   A  G    A
Sbjct: 446 ATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDA 505

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +  F+EM+   + P+ I F+GVLTACSHGGLV++G   + +M   +G+SP I H  C+VD
Sbjct: 506 LHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVD 565

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGRAG L +A   I +     + VIW SLLA+C+ H++++     A RI EL+P  S  
Sbjct: 566 LLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSAS 625

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +V+L N+Y  AG+ +  ++ R  MK++G++K PG S IE+   VH F +GD+SHPE + I
Sbjct: 626 YVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAI 685

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
            + L EM  R      +  L     ++ ++E+  L++ HSEKLA+A G+I   ++ PIRV
Sbjct: 686 YTKLEEMLSR------IEKLATTDTEISKREQN-LMNCHSEKLAVALGMIHLPQSAPIRV 738

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +KNLR+C DCHS  KL+SK  +REII+RD  RFH FR GSCSC+D+W
Sbjct: 739 MKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 214/485 (44%), Gaps = 31/485 (6%)

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
           +F+ N L+  Y   G  +  RR+ DEM  RN VS+  LI A +R  L   ++        
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
            G+  +  +    ++AC++  +L  G  V A     G+ +   + N+LV MY KCG +  
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A+++F   ++R+ V  N+++S YVR G   E + +   M   G   +   + S +   + 
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 353 LGD--LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
            GD  +      HG V++ GL+    + + MIDMY K G    A  +F  +    VV +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++IAG  +                       T++G    + +  EA+ L+  + S  ++ 
Sbjct: 283 TMIAGFCRT---------------------ETVIG----KEVASEALTLYSEVQSRGMQP 317

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
              T   V  AC   G L+  K I+  + K     D  + +AL+D++   G  +   + F
Sbjct: 318 TEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCF 377

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           R   K D+  WTA +         E+A+ LF+E L  G+KPD      V+ AC+   +  
Sbjct: 378 RSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVAR 437

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLA 649
            G  + +      G     V     V +  R+G +  A    + M  E +DV+ W ++++
Sbjct: 438 AGEQI-QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEM--ESHDVVSWSAVIS 494

Query: 650 ACQKH 654
              +H
Sbjct: 495 CHAQH 499


>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Brachypodium distachyon]
          Length = 892

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 336/563 (59%), Gaps = 5/563 (0%)

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y   G +D +  L    +D   +   + +  +   G    ALA+L +ML  G  P   T+
Sbjct: 333 YAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTL 392

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM-S 402
            +++ A   L     GR  HGY  +  L G   +   ++ MY + G    A  +FD M  
Sbjct: 393 SASLPACRGLSP---GRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLP 449

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           +  VVS  +++      G ++ AR +F  +P +D + WN M+ G TQ     EA+ LFR 
Sbjct: 450 DPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRR 509

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCG 521
           ML   ++ D VT+V V SA   LG ++  KW+++Y++ +  +   +++ TAL+DM+ +CG
Sbjct: 510 MLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCG 569

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
               A+ VF  +  +D+  W A I   AM G+  +A+E+F +   QG+ P  I F+G+L 
Sbjct: 570 SLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLN 629

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH G+V +G   F+SM   +G+ P+I HYGCMVDLLGRAGL+ EA  L++SM + P+ 
Sbjct: 630 ACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDA 689

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           V+W SLLAAC+ H+N+ +    A+ +       SG+++LLSNIYA+ G W  VARVR  M
Sbjct: 690 VMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMM 749

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           K  GI+K PG SSIE++ +V+EF +GD SHP  + I  ML +MN  +++ G+VP    VL
Sbjct: 750 KASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVL 809

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            D+DE  K+  L+ HSEKLA+AFGLIST     I++VKNLR C DCH+  KL+S++  R+
Sbjct: 810 HDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRK 869

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+ RD NRFH F  GSCSC D+W
Sbjct: 870 IVFRDRNRFHHFVDGSCSCGDYW 892



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 177/419 (42%), Gaps = 50/419 (11%)

Query: 35  SIGSLKNCKTLNELKQPHCHILKQGL--GHKPSYISKVVCTCAQMGTFE-SLTYAQKAFD 91
           ++  L +C T     + H  +L+ GL      +   ++    A  G  + SL   ++  D
Sbjct: 292 AVSLLTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRD 351

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
                     T   Y S I  +S  G  + A++L  ++   G+LP   T    L AC   
Sbjct: 352 ---------PTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPAC--- 399

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM------------ 199
                G  +HG   K+    D +V   L+  Y   GD    R +FD+M            
Sbjct: 400 RGLSPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAM 459

Query: 200 --------------------SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
                                 ++ V W ++I    +   P EA+ LF  M+  G++P+ 
Sbjct: 460 LTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDE 519

Query: 240 VTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           VT+V V+SA A+L  +E G  + +Y+ +   ++ +  +  AL+DMY KCG++  A  +F 
Sbjct: 520 VTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFH 579

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
              D+++V+ N +++ Y   G +R+AL +  +    G  P  +T +  ++A +  G +  
Sbjct: 580 GIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEE 639

Query: 359 GRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGK-QEMACRIFDHMSNKTVVSWNSLIAG 415
           GR     + R  G++        M+D+  + G  +E  C +         V W SL+A 
Sbjct: 640 GREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAA 698



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/502 (22%), Positives = 203/502 (40%), Gaps = 83/502 (16%)

Query: 149 TKSSAFGEGVQVHGAIVKMGF----DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           T  S      ++H A+++ G     DR V     L   Y   G +     +     +   
Sbjct: 297 TSCSTARRAAELHAAVLRTGLLDATDRAVAFR--LQRAYAASGRLDLSLALLRRTRDPTA 354

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           + +TS I A + R     A+ L  +M+ +G+ P + T+   + AC   + L  G  +  Y
Sbjct: 355 IFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPAC---RGLSPGRALHGY 411

Query: 265 IDELGMKANALMVNALVDMYMKCG--------------------------------AVDT 292
             +L +  ++ +  AL+ MY + G                                A+D 
Sbjct: 412 AFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDD 471

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A+ LF     ++ V  N ++  Y + G   EAL +   ML  G  PD VT++  +SA AQ
Sbjct: 472 ARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQ 531

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDS--ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           LG +  G+  H YV +N      S  +   +IDMY KCG    A  +F  + +K +V WN
Sbjct: 532 LGTVESGKWLHSYV-KNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWN 590

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++I G   +GD   A E+F +   R+   W T                            
Sbjct: 591 AMINGYAMHGDSRKALEMFVQ--SREQGLWPT---------------------------- 620

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQV 529
             +T +G+ +AC + G ++  +  +  +E+  GI   ++    +VD+  R G  + A  +
Sbjct: 621 -DITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCL 679

Query: 530 FRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS--IVFVGVLTACSHG 586
            + M+   D   W + + A  +  N     ++ + ++ +G+      I+   +  A  + 
Sbjct: 680 VQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNW 739

Query: 587 GLVNQGWHLFRSMTDIHGVSPQ 608
           G V +     RSM    G+  +
Sbjct: 740 GEVAR----VRSMMKASGIQKE 757



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 139/360 (38%), Gaps = 49/360 (13%)

Query: 15  PTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           P +  L++       P       SL  C+ L+  +  H +  K  L       + ++   
Sbjct: 372 PALALLSDMLAQGLLPTAHTLSASLPACRGLSPGRALHGYAFKLALAGDSYVATALLGMY 431

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFM---------------------------YN 107
           A+ G     T A+  FD  + D    +   M                           +N
Sbjct: 432 ARAG---DATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWN 488

Query: 108 SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV-K 166
           ++I GY+  G   EA+ L+  + G G+ PD+ T   VL+A  +      G  +H  +   
Sbjct: 489 AMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNS 548

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
                 V V   LI+ Y +CG + D   VF  + ++++V W ++I   A     ++A+ +
Sbjct: 549 RRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEM 608

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID-ELGMKANALMVNALVDMYM 285
           F +  E+G+ P  +T + +++AC+    +E G      ++ E G+         +VD+  
Sbjct: 609 FVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLG 668

Query: 286 KCGAVDTA----------------KQLFGECK-DRNLVLCNTIMSNYVRLGLAREALAIL 328
           + G +  A                  L   C+  +N+ L   I    V  GLA   + IL
Sbjct: 669 RAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYIL 728


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/561 (42%), Positives = 327/561 (58%), Gaps = 4/561 (0%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           GA    +++  +  + N++  N ++S   R G AR+A+  L  M   G  PD   +  A+
Sbjct: 104 GAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCAL 163

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           SA   +GD+  G   HGYV++ G      +   +IDMY KCG+ +   R+FD  S+  V 
Sbjct: 164 SAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVA 223

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVM 463
           S N+L+AGL +N  V  A  +F E  GR    + +SW +++    Q     EA++LFR M
Sbjct: 224 SCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREM 283

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
            SE I+ + VT+  V  A   + AL   +  + +  + G H D+ + +ALVDM+A+CG  
Sbjct: 284 QSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRV 343

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           + A  +F  M  R+V +W A IG  AM G  E AV LF  M     KPD + F  VL AC
Sbjct: 344 RDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGAC 403

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           S  G   +G   F  M   HG+SP++ HY CMV LLGRAG L +A D+I  MP EP+  I
Sbjct: 404 SQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCI 463

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           WGSLL +C+ H NV +A  AAE + +L+PE +G +VLLSNIYAS   W  V R+R  MK 
Sbjct: 464 WGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKT 523

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
            G++K  G S IE+  KVH   +GD SHP M  I+  L+ +   +R  G+ P    VL D
Sbjct: 524 VGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHD 583

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           V+EQEK  +LS HSEKLA+A GLISTS   P++V+KNLR+C DCH   K +S    REI 
Sbjct: 584 VEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIY 643

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD NRFH F+ G CSC+D+W
Sbjct: 644 VRDTNRFHHFKDGKCSCADYW 664



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 195/490 (39%), Gaps = 106/490 (21%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD    P  L +C+          +H A    G  RD FV + L++ Y   G   D R V
Sbjct: 21  PDPRLLPSALKSCSALRLA---RALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSV 77

Query: 196 FDEMSERNVVSWTSLICACA-----------------------------------RRDLP 220
            D M  R VV W++LI A A                                   R    
Sbjct: 78  LDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRA 137

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           ++AV     M  EG  P++  + C +SA   + ++ +G+++  Y+ + G + +A +  AL
Sbjct: 138 RDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATAL 197

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR-------LGLAR----------- 322
           +DMY KCG  D   ++F E    ++  CN +++   R       L L R           
Sbjct: 198 IDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNV 257

Query: 323 -----------------EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
                            EA+ +  EM   G  P+ VT+   + A A +  L+ GR  H +
Sbjct: 258 VSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCF 317

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
            LR G      + + ++DMY KCG+   A  IF+ M  + VVSWN++I G   +G+ E+ 
Sbjct: 318 SLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAEN- 376

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                         A+ LFR M S + K D VT   V  AC   
Sbjct: 377 ------------------------------AVRLFRSMQSSKEKPDLVTFTCVLGACSQA 406

Query: 486 GALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTA 543
           G  +  +  +  ++ K+GI   M+    +V +  R G    A  +  +M  + D   W +
Sbjct: 407 GWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGS 466

Query: 544 AIGAMAMEGN 553
            +G+  + GN
Sbjct: 467 LLGSCRVHGN 476



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 158/370 (42%), Gaps = 45/370 (12%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           ++ +     +  +N L+ G +  G   +A+   V + G G LPD       L+A      
Sbjct: 112 MRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGD 171

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS------------- 200
              G Q+HG +VK G   D  V   LI+ YG+CG   +  RVFDE S             
Sbjct: 172 VAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAG 231

Query: 201 ----------------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
                                 E NVVSWTS++  C +     EAV LF EM  EGI+PN
Sbjct: 232 LSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPN 291

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           SVT+ CV+ A A +  L  G     +    G   +  + +ALVDMY KCG V  A+ +F 
Sbjct: 292 SVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFE 351

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
               RN+V  N ++  Y   G A  A+ +   M     +PD VT    + A +Q G    
Sbjct: 352 AMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEE 411

Query: 359 GR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSL 412
           GR     M H + +   +E +      M+ +  + GK + A  I + M        W SL
Sbjct: 412 GRSYFNEMQHKHGISPRMEHY----ACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSL 467

Query: 413 IAGLIKNGDV 422
           +     +G+V
Sbjct: 468 LGSCRVHGNV 477


>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g22410, mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/617 (37%), Positives = 358/617 (58%), Gaps = 6/617 (0%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSE 201
           +L ACT  +   E   +H  ++  G   D F  + L+ F    E  ++    ++ +  + 
Sbjct: 60  LLEACTSMAKMKE---IHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQNLELGDR 260
            N  SW   I      + P  AV L+  M+ +G   P++ T   +   CA        + 
Sbjct: 117 LNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANE 176

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           +  ++ +LG  ++  + NA++ + + CG +  A++LF E   R+LV  N+I++ YVR GL
Sbjct: 177 ILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGL 236

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           A EA  +  +M      PD VTM+  VSASAQL +L  GR  H  +   GL     + N 
Sbjct: 237 ADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANA 296

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++DMY+KC   E A  +F++M+ KTVVSW +++ G  K G +ESA  +F+EMP +D + W
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N ++GG  Q    +EA+ LF  M +  +  D++T+V   SAC  LGALD+  W++ Y++K
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           + +  ++ L TALVDM+A+CG+ ++A+QVF  M  R+   WTA I  +A+ G    A+  
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISY 476

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F+EM+  G+ PD I F+GVL+AC HGGLV+QG   F  MT  +G+SP++ HY C+VDLLG
Sbjct: 477 FSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLG 536

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAG L EA +LI+SMP EP+ V+WG+L    + H NV +   AA ++ ELDP   G++VL
Sbjct: 537 RAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVL 596

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           L+N+Y  A  W    +VR  M+E+G+ K PG SSIE+NG V++F   D+SHP+   I   
Sbjct: 597 LANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYEC 656

Query: 741 LREMNCRLRDAGYVPDL 757
           L  +  ++      P L
Sbjct: 657 LTRLTRQIEVIEVDPSL 673



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/581 (28%), Positives = 285/581 (49%), Gaps = 74/581 (12%)

Query: 21  TNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           TN + +    + +P +  L+ C ++ ++K+ H  ++  GL      +S++V  CA +  +
Sbjct: 43  TNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCA-ISEW 101

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKF 139
            +L Y  K     I +N  +   F +N  IRGY      + A+ LY  +   G  +PD +
Sbjct: 102 RNLDYCDK-----ILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNY 156

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+P +   C   S      ++ G ++++GFD D+FV N +I+    CG+++  R++FDE 
Sbjct: 157 TYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDES 216

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             R++VSW S+I    R  L  EA  L+++M E  + P+ VTM+ V+SA A+L+NL LG 
Sbjct: 217 CVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGR 276

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK------------------------- 294
           ++   I+E+G+     + NAL+DMY+KC  ++ AK                         
Sbjct: 277 KLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFG 336

Query: 295 ------QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
                 +LF E  ++++VL N ++  +V+   ++EALA+  EM      PD++T+++ +S
Sbjct: 337 LLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLS 396

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A +QLG L  G   H YV ++ L    ++   ++DMY KCG  + A ++F+ M  +  ++
Sbjct: 397 ACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLT 456

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W ++I GL  +G   +A   FSE                               M+S  +
Sbjct: 457 WTAIICGLALHGQPHAAISYFSE-------------------------------MISIGL 485

Query: 469 KVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
             D +T +GV SAC + G +D  + + Y    K GI   ++  + LVD+  R G  + A 
Sbjct: 486 VPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAE 545

Query: 528 QVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           ++ R M  + D   W A      + GN   GE+A     E+
Sbjct: 546 ELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLEL 586



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 204/442 (46%), Gaps = 58/442 (13%)

Query: 67  ISKVVCTCAQMGTFESLTYAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
           I  V+ +C +      L  A+K FD   ++D      L  +NS+I GY   GL  EA  L
Sbjct: 196 IIHVLVSCGE------LLAARKLFDESCVRD------LVSWNSIINGYVRCGLADEAFDL 243

Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           Y ++    ++PD+ T   V++A  +      G ++H +I +MG +  V + N L++ Y +
Sbjct: 244 YYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIK 303

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACAR-----------RDLP-------------- 220
           C +I   + +F+ M+++ VVSWT+++   A+            ++P              
Sbjct: 304 CKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGF 363

Query: 221 ------KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
                 KEA+ LF EM    + P+ +T+V  +SAC++L  L++G  +  Y+D+  +  N 
Sbjct: 364 VQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNV 423

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            +  ALVDMY KCG +  A Q+F E   RN +    I+      G    A++   EM+  
Sbjct: 424 ALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISI 483

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           G  PD +T +  +SA    G +  GR     M   Y +   L+ +    + ++D+  + G
Sbjct: 484 GLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHY----SCLVDLLGRAG 539

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLG 445
             E A  +   M      V W +L  G   +G+V   E A     E+   D   +  +  
Sbjct: 540 FLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLAN 599

Query: 446 GLTQENMFEEAMELFRVMLSER 467
                NM+E+A ++ R M+ ER
Sbjct: 600 MYGDANMWEQARKV-RKMMEER 620


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/774 (33%), Positives = 417/774 (53%), Gaps = 43/774 (5%)

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA---GFG- 133
           GT   +T A + FD   + N     L  +NS+IR +S  G   E+  L  E+    G G 
Sbjct: 233 GTHGFVTDALQLFDIMPERN-----LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
            +PD  T   VL  C +    G G  VHG  VK+  D+++ + N L++ Y +CG I + +
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE--EGIKPNSVTMVCVISACAK 251
            +F   + +NVVSW +++   +          +  +M+   E +K + VT++  +  C  
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
              L     +  Y  +     N L+ NA V  Y KCG++  A+++F   + + +   N +
Sbjct: 408 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +  + +    R +L    +M + G  PD  T+ S +SA ++L  L  G+  HG+++RN L
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 527

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           E    +  +++ +Y+ CG+      +FD M +K++V                        
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV------------------------ 563

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                  SWNT++ G  Q    + A+ +FR M+   I++  ++M+ V  AC  L +L L 
Sbjct: 564 -------SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           +  +AY  K+ +  D  +A +L+DM+A+ G   ++ +VF  ++++  ++W A I    + 
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G  ++A++LF EM R G  PD + F+GVLTAC+H GL+++G      M    G+ P + H
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITEL 670
           Y C++D+LGRAG L +AL ++     E  DV IW SLL++C+ HQN+++    A ++ EL
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 796

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           +PEK   +VLLSN+YA  GKW +V +VR +M E  +RK  G S IE+N KV  F  G+  
Sbjct: 797 EPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERF 856

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
                 I S+   +  ++   GY PD  +V  D+ E+EK   L  HSEKLA+ +GLI TS
Sbjct: 857 LDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTS 916

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +   IRV KNLR+C DCH+ AKL+SKV +REI+VRDN RFH F+ G CSC D+W
Sbjct: 917 EGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 243/499 (48%), Gaps = 38/499 (7%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKS 151
           ++ D   S  LF +N++I  YS   L  E +  ++E+ +   +LPD FT+P V+ AC   
Sbjct: 141 FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 200

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
           S  G G+ VHG +VK G   DVFV N L++FYG  G + D  ++FD M ERN+VSW S+I
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260

Query: 212 CACARRDLPKEAVYLFFEMVEE----GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
              +     +E+  L  EM+EE       P+  T+V V+  CA+ + + LG  V  +  +
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
           L +    ++ NAL+DMY KCG +  A+ +F    ++N+V  NT++  +   G       +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380

Query: 328 LDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
           L +ML  G   + D VT+L+AV        L   +  H Y L+      + + N  +  Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            KCG    A R+F  + +KTV SWN+LI G  ++ D   + +   +M           + 
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK----------IS 490

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
           GL                       D  T+  + SAC  L +L L K ++ +I +N +  
Sbjct: 491 GLLP---------------------DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D+ +  +++ ++  CG+      +F  ME + + +W   I      G  ++A+ +F +M+
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589

Query: 566 RQGIKPDSIVFVGVLTACS 584
             GI+   I  + V  ACS
Sbjct: 590 LYGIQLCGISMMPVFGACS 608



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 192/411 (46%), Gaps = 34/411 (8%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKP 237
           +I  Y  CG   D R VFD +  +N+  W ++I + +R +L  E +  F EM+    + P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +  T  CVI ACA + ++ +G  V   + + G+  +  + NALV  Y   G V  A QLF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR----PDRVTMLSAVSASAQL 353
               +RNLV  N+++  +   G + E+  +L EM+         PD  T+++ +   A+ 
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
            ++  G+  HG+ ++  L+    + N ++DMY KCG    A  IF   +NK VVSWN+++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            G    GD     +V  +M          + GG                   E +K D V
Sbjct: 366 GGFSAEGDTHGTFDVLRQM----------LAGG-------------------EDVKADEV 396

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T++     C +   L   K ++ Y  K     +  +A A V  +A+CG    A +VF  +
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
             + V++W A IG  A   +   +++   +M   G+ PDS     +L+ACS
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 213/395 (53%), Gaps = 19/395 (4%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L  LK+ HC+ LKQ   +     +  V + A+ G   SL+YAQ+ F + I+    S T+ 
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCG---SLSYAQRVF-HGIR----SKTVN 462

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +N+LI G++       ++  ++++   G+LPD FT   +L+AC+K  +   G +VHG I
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           ++   +RD+FV   +++ Y  CG++   + +FD M ++++VSW ++I    +   P  A+
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            +F +MV  GI+   ++M+ V  AC+ L +L LG    AY  +  ++ +A +  +L+DMY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            K G++  + ++F   K+++    N ++  Y   GLA+EA+ + +EM   G  PD +T L
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702

Query: 345 SAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF- 398
             ++A    G +  G     +M   + L+  L+ +  +    IDM  + G+ + A R+  
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDKALRVVA 758

Query: 399 DHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
           + MS +  V  W SL++    + ++E   +V +++
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL 793



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 31/345 (8%)

Query: 245 VISACAKLQNLELGDRVCAYID-ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
           ++ A  K +++E+G ++   +     ++ + ++   ++ MY  CG+ D ++ +F   + +
Sbjct: 90  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           NL   N ++S+Y R  L  E L    EM+      PD  T    + A A + D+  G   
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           HG V++ GL     + N ++  Y   G    A ++FD M  + +VSWNS+I     NG  
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG-- 267

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                 FSE           +LG + +EN     M             D  T+V V   C
Sbjct: 268 ------FSEES-------FLLLGEMMEENGDGAFMP------------DVATLVTVLPVC 302

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
                + L K ++ +  K  +  ++ L  AL+DM+++CG    A  +F+    ++V +W 
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQG--IKPDSIVFVGVLTACSH 585
             +G  + EG+     ++  +ML  G  +K D +  +  +  C H
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D  L T ++ M+A CG P  +  VF  +  +++  W A I + +     ++ +E F EM+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178

Query: 566 R-QGIKPDSIVFVGVLTACSHGGLVNQGWHL-FRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
               + PD   +  V+ AC+  G+ + G  L    +    G+   +     +V   G  G
Sbjct: 179 STTDLLPDHFTYPCVIKACA--GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLL 648
            + +AL L   MP E N V W S++
Sbjct: 237 FVTDALQLFDIMP-ERNLVSWNSMI 260


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/602 (37%), Positives = 351/602 (58%), Gaps = 33/602 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V++ C     +  G RV A++ +   +    +   L+ +Y KC  +  A+++  E  +RN
Sbjct: 16  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +V    ++S Y + G A EAL +  EML+ G  P+  T  + +++         GR  H 
Sbjct: 76  VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
            V++   E    + ++++DMY K GK                               +  
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGK-------------------------------ICE 164

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           AR VF  +P RD +S   ++ G  Q  + EEA++LFR +  E ++ + VT   V +A   
Sbjct: 165 ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSG 224

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           L ALD  + +++++ +  +   + L  +L+DM+++CG    + ++F  M +R V +W A 
Sbjct: 225 LAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAM 284

Query: 545 IGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
           +   +  G G +AVELF  M  +  +KPDS+ F+ VL+ CSHGG+ ++G  +F  M +  
Sbjct: 285 LVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQK 344

Query: 604 -GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
            G  P+I HYGC+VDL GRAG + EA + IK MP EP   IWGSLL AC+ HQNV I  +
Sbjct: 345 DGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEF 404

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
            A R+ E++ E +G +V+LSN+YASAG+W +V  VR  MKE+ + K PG S IE++  +H
Sbjct: 405 VARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLH 464

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F + D SHP    + + +RE++ ++++AGYVP+L+ VL DVD+++K+ +L  HSEKLA+
Sbjct: 465 TFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLAL 524

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGLI T    P+R++KNLR+C DCH+FAK +S+VY RE+ +RD NRFH    G+CSC D
Sbjct: 525 AFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGD 584

Query: 843 FW 844
           +W
Sbjct: 585 YW 586



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 218/414 (52%), Gaps = 35/414 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VL  C   +A  EG +VH  ++K  ++  V++   LI  Y +C  + D RRV DEM ERN
Sbjct: 16  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSWT++I   ++R    EA++LF EM+  G  PN  T   V+++C      +LG ++ +
Sbjct: 76  VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            + +   +++  + ++L+DMY K G +  A+++F    +R++V C  I+S Y +LGL  E
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +   +   G R + VT  S ++A + L  L  GR  H +VLR  L  +  + N++ID
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG    + RIFD M  +TV+SWN+++ G  K+G                       
Sbjct: 256 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG----------------------- 292

Query: 444 LGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYI--EK 500
           LG         EA+ELF++M  E ++K D VT + V S C + G  D    I+  +  +K
Sbjct: 293 LG--------REAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQK 344

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN 553
           +G   +++    +VD+F R G  + A +  ++M     +A W + +GA  +  N
Sbjct: 345 DGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQN 398



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 171/325 (52%), Gaps = 26/325 (8%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + ++I GYS  G   EA+ L+VE+   G  P++FTF  VL +CT SS F  G Q+H  ++
Sbjct: 79  WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI 138

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  F+  +FV + L++ Y + G I + RRVFD + ER+VVS T++I   A+  L +EA+ 
Sbjct: 139 KTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALD 198

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF  +  EG++ N VT   V++A + L  L+ G +V +++    +    ++ N+L+DMY 
Sbjct: 199 LFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYS 258

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTML 344
           KCG++  ++++F    +R ++  N ++  Y + GL REA+ +   M      +PD VT L
Sbjct: 259 KCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFL 318

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-------------MIDMYMKCGKQ 391
           + +S  +           HG +   GLE +  + N              ++D++ + G+ 
Sbjct: 319 AVLSGCS-----------HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRV 367

Query: 392 EMACRIFDHMS-NKTVVSWNSLIAG 415
           E A      M    T   W SL+  
Sbjct: 368 EEAFEFIKKMPFEPTAAIWGSLLGA 392


>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/547 (42%), Positives = 335/547 (61%), Gaps = 40/547 (7%)

Query: 307 LCNTIMSNYVR-----LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           L NT++  +V+      G     ++I   M  HG +PD  T    + + A    L  GR 
Sbjct: 26  LWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRS 85

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H  +LR GL          ID +++                       SLI+    +G 
Sbjct: 86  VHAQILRFGLA---------IDPFVQ----------------------TSLISMYSSSGL 114

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML---SERIKVDRVTMVGV 478
           V+ AR +F+ MP R+ ISW+ M+ G  +   ++EA+ LFR M       ++ +  TM GV
Sbjct: 115 VDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGV 174

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRD 537
            +ACG LGAL+  KW +AYI+K G+  D+ L TAL+DM+A+CG  ++A  VF  +   +D
Sbjct: 175 LAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKD 234

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           V AW+A I  +AM G  E+ V LF++M+ QG++P+++ F+ V  AC HGGLV++G    R
Sbjct: 235 VMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLR 294

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
            MT+ + + P I HYGCMVDL GRAG + EA +++KSMP+EP+ ++WG+LL+  + H ++
Sbjct: 295 RMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDI 354

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           +    A +++ EL+P  SG +VLLSN+YA  G+W +V  VR  M+  GI+K+PG S IEV
Sbjct: 355 ETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEV 414

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
            G +HEF  GD+SHPE   I  ML E+  RL+  GYV +   VLLD+DE+ K+  LS HS
Sbjct: 415 GGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHS 474

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           EKLA+A+G + TS   PIR+VKNLR+C DCH   K++SKV+DREIIVRD NRFH F QG 
Sbjct: 475 EKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGL 534

Query: 838 CSCSDFW 844
           CSC D+W
Sbjct: 535 CSCRDYW 541



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 173/336 (51%), Gaps = 19/336 (5%)

Query: 104 FMYNSLIRGY-----SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           F++N+LIR +        G     IS++V +   G+ PD  TFPF+L +    S    G 
Sbjct: 25  FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGR 84

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            VH  I++ G   D FV+  LI+ Y   G +   R +F  M ERNV+SW+ +I    R  
Sbjct: 85  SVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCG 144

Query: 219 LPKEAVYLFFEMVEEG---IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
             KEA+ LF EM   G   ++PN  TM  V++AC +L  LE G    AYID+ GM  + +
Sbjct: 145 QYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVV 204

Query: 276 MVNALVDMYMKCGAVDTAKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           +  AL+DMY KCG+V+ A  +F     +++++  + ++S     GLA E + +  +M+  
Sbjct: 205 LGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQ 264

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           G RP+ VT L+   A    G +  G     RM   Y +   ++ +      M+D+Y + G
Sbjct: 265 GVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHY----GCMVDLYGRAG 320

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVES 424
           + + A  +   M     V+ W +L++G   +GD+E+
Sbjct: 321 RIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIET 356


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/782 (34%), Positives = 407/782 (52%), Gaps = 87/782 (11%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCLINFYGECGDIVD 191
           G++PD+ +                G Q+H   VK GFDR +V V   L++ Y +CG + D
Sbjct: 110 GLIPDRVS----------------GEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVED 153

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
           GR VF+ M +RNVV+WTSL+    +     + + LFF M  EG+ PN  T   V+SA A 
Sbjct: 154 GRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVAS 213

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
              ++LG RV A   + G ++   + N+L++MY KCG V+ AK +F + + R++V  NT+
Sbjct: 214 QGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTL 273

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           M+  +      EAL +  +      +  + T  + +   A L  L   R  H  VL++G 
Sbjct: 274 MAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGF 333

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHM-SNKTVVSWNSLIAGLIKNGDVESAREVFS 430
               ++   ++D Y KCG+ + A  IF  M  ++ VVSW ++I G I+N D+  A  +FS
Sbjct: 334 HSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFS 393

Query: 431 EMPGRDHISWN------------------------------------TMLGGLTQENMFE 454
            M   D++  N                                     +L   ++    E
Sbjct: 394 RMR-EDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTE 452

Query: 455 EAMELFRV-----------MLS--------------------ERIKVDRVTMVGVASACG 483
           EA+ +F++           MLS                    + +K +  T+     AC 
Sbjct: 453 EALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACA 512

Query: 484 YLGA-LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
              A +D  +  +A   K      + + +ALV M+AR G    A  VF R   RD+ +W 
Sbjct: 513 SPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWN 572

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + I   A  G  ++A++ F +M   GI+ D   F+ V+  C+H GLV +G   F SM   
Sbjct: 573 SMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMD 632

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           H +SP + HY CMVDL  RAG L E ++LI+ MP     ++W +LL AC+ H+NV++   
Sbjct: 633 HNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKL 692

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA+++  L+P+ S  +VLLSNIYA+AG+W     VR  M  + ++K  G S I++  KVH
Sbjct: 693 AAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVH 752

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F + D+SHP    I + L+ M  RL+  GY P+ + VL D+ E++K+ +L  HSE+LA+
Sbjct: 753 SFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLAL 812

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGLI+T    P+++VKNLR+C DCH   K+VS + DREII+RD +RFH F  G+CSC D
Sbjct: 813 AFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGD 872

Query: 843 FW 844
           FW
Sbjct: 873 FW 874



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 16/255 (6%)

Query: 48  LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYN 107
           L Q H  I+K    H PS  + ++ + +++G  E      K  D+  KD      +  ++
Sbjct: 419 LPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDH--KD------VVAWS 470

Query: 108 SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA-FGEGVQVHGAIVK 166
           +++  YS  G    A +++++++  G+ P++FT    ++AC   +A   +G Q H   +K
Sbjct: 471 AMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIK 530

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
             +   + V + L+  Y   G I   R VF+  ++R++VSW S+I   A+    KEA+  
Sbjct: 531 YRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDT 590

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV----NALVD 282
           F +M   GI+ +  T + VI  C     ++ G +   Y D + M  N        + +VD
Sbjct: 591 FRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQ---YFDSMVMDHNISPTMEHYSCMVD 647

Query: 283 MYMKCGAVDTAKQLF 297
           +Y + G +D    L 
Sbjct: 648 LYSRAGKLDETMNLI 662



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 4/122 (3%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           + +T   L  +NS+I GY+  G   EA+  + ++   GI  D  TF  V+  CT +    
Sbjct: 561 ERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVK 620

Query: 156 EGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLIC 212
           EG Q   ++V M  +    +E+  C+++ Y   G + +   + + M      + W +L+ 
Sbjct: 621 EGQQYFDSMV-MDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLG 679

Query: 213 AC 214
           AC
Sbjct: 680 AC 681


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/715 (34%), Positives = 394/715 (55%), Gaps = 43/715 (6%)

Query: 136 PDKFTFPFVLNACTKSSAFG-EGVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGR 193
           P+ FT      AC     F   G  V G ++K GF   DV V   LI+ +   GD+V  +
Sbjct: 141 PNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQ 200

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           RVFD + ER  V WT LI    +     + V LF  M+++G +P+  +M  +ISAC +L 
Sbjct: 201 RVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELG 260

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCG---AVDTAKQLFGECKDRNLVLCNT 310
           ++ LG ++ +    LG+ +++ +   LVDMY K     +++ A+++F      N++    
Sbjct: 261 SVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTA 320

Query: 311 IMSNYVRLGLARE-ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++S YV+ G+     +A+  EML    RP+ +T  + + A A L D   GR  H +VL+ 
Sbjct: 321 LISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKT 380

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            +   + + N ++ MY + G  E A + FD +    ++S +          DVE+ R   
Sbjct: 381 SIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSP---------DVETER--- 428

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                 ++ S ++ + G+                      V   T   + SA   +G L 
Sbjct: 429 ------NNASCSSKIEGMDD-------------------GVSTFTFASLLSAAASVGLLT 463

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
             + ++A   K G   D  ++ +LV M+ARCG  + A + F  M+  +V +WT+ I  +A
Sbjct: 464 KGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLA 523

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
             G  +QA+ +F++M+  G+KP+ + ++ VL+ACSH GLV +G   FRSM   HG+ P++
Sbjct: 524 KHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRM 583

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HY C+VDLL R+GL+ EA   I  MP + + ++W +LL+AC+ + N +I   AA  +  
Sbjct: 584 EHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVIN 643

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           L+P     +VLLSN+YA AG W  VAR+R  M+++ + K  G S ++V   +HEF +GD 
Sbjct: 644 LEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDT 703

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SHP   +I + L  +   ++D GYVPD + VL D+ E+ K+  L  HSEK+A+AFGLI+T
Sbjct: 704 SHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITT 763

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           S T P+R+ KNLR+C DCHS  K +SK   REII+RD+NRFH  + G CSC ++W
Sbjct: 764 SATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 233/510 (45%), Gaps = 56/510 (10%)

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFE---SLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           +LK G      + + V   CA +  F     L  AQ+ FD  I+      TL     LI 
Sbjct: 170 VLKTGF-----WGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTL-----LIT 219

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
            Y   G   + + L++ +   G  PD ++   +++ACT+  +   G Q+H   +++G   
Sbjct: 220 RYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVS 279

Query: 172 DVFVENCLINFYGECG---DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY-LF 227
           D  V   L++ Y +      +   R+VF  M   NV+SWT+LI    +  + +  V  LF
Sbjct: 280 DSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALF 339

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            EM+ E I+PN +T   ++ ACA L + + G ++ A++ +  +    ++ NALV MY + 
Sbjct: 340 REMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAES 399

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G ++ A++ F +  + N++  +  +            +  +D+ +         T  S +
Sbjct: 400 GCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGV------STFTFASLL 453

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           SA+A +G L  G+  H   ++ G      I N+++ MY +CG  E ACR FD M +  V+
Sbjct: 454 SAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVI 513

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SW S+I+GL K+G  + A  +F +M          +L G                     
Sbjct: 514 SWTSIISGLAKHGYAKQALSMFHDM----------ILAG--------------------- 542

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRA 526
           +K + VT + V SAC ++G +   K  +  ++K+ G+   M+    +VD+ AR G  + A
Sbjct: 543 VKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEA 602

Query: 527 MQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
            Q    M  K D   W   + A    GN E
Sbjct: 603 RQFINEMPCKADALVWKTLLSACRTYGNTE 632



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 190/408 (46%), Gaps = 59/408 (14%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H   L+ GL         +V   A++    S+ +A+K F    + N  S     + +
Sbjct: 266 QQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMS-----WTA 320

Query: 109 LIRGYSCIGLGVE---AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           LI GY  +  GV+    ++L+ E+    I P+  T+  +L AC   S    G Q+H  ++
Sbjct: 321 LISGY--VQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVL 378

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI------CACARRDL 219
           K        V N L++ Y E G + + R+ FD++ E N++S +  +       +C+ +  
Sbjct: 379 KTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSK-- 436

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
                    E +++G+  ++ T   ++SA A +  L  G ++ A   + G +++  + N+
Sbjct: 437 --------IEGMDDGV--STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNS 486

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           LV MY +CG ++ A + F E KD N++   +I+S   + G A++AL++  +M+L G +P+
Sbjct: 487 LVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPN 546

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            VT ++ +SA + +G                               +K GK+       D
Sbjct: 547 DVTYIAVLSACSHVG------------------------------LVKEGKEHFRSMQKD 576

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGG 446
           H     +  +  ++  L ++G VE AR+  +EMP + D + W T+L  
Sbjct: 577 HGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSA 624



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 160/323 (49%), Gaps = 38/323 (11%)

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           +  +A++ N+L+ MY KCGAV+ A+++F + C  R+LV    + S   R G  RE+L +L
Sbjct: 72  LDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLL 131

Query: 329 DEMLLHGPRPDRVTMLSAVSAS-AQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYM 386
            EML  G RP+  T+ +A  A   Q    L G +  G+VL+ G  G D S+   +IDM+ 
Sbjct: 132 GEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFA 191

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           + G    A R+FD +  +T V W  LI   ++ G                          
Sbjct: 192 RNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAG-------------------------- 225

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                   + +ELF  ML +  + D  +M  + SAC  LG++ L + +++   + G+  D
Sbjct: 226 -----CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSD 280

Query: 507 MQLATALVDMFARCG---DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV-ELFN 562
             ++  LVDM+A+       + A +VF+ M + +V +WTA I      G  E  V  LF 
Sbjct: 281 SCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFR 340

Query: 563 EMLRQGIKPDSIVFVGVLTACSH 585
           EML + I+P+ I +  +L AC++
Sbjct: 341 EMLNESIRPNHITYSNLLKACAN 363



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 150/324 (46%), Gaps = 22/324 (6%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  L++    +Q H H+LK  + H     + +V   A+ G  E    A+KAFD   +
Sbjct: 358 LKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEE---ARKAFDQLYE 414

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            N  S +  +     R  +     +E +   V           FTF  +L+A        
Sbjct: 415 TNILSMSPDVETE--RNNASCSSKIEGMDDGVS---------TFTFASLLSAAASVGLLT 463

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           +G ++H   +K GF  D  + N L++ Y  CG + D  R FDEM + NV+SWTS+I   A
Sbjct: 464 KGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLA 523

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG-DRVCAYIDELGMKANA 274
           +    K+A+ +F +M+  G+KPN VT + V+SAC+ +  ++ G +   +   + G+    
Sbjct: 524 KHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRM 583

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGE--CKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
                +VD+  + G V+ A+Q   E  CK   LV   T++S     G         + ++
Sbjct: 584 EHYACIVDLLARSGLVEEARQFINEMPCKADALVW-KTLLSACRTYGNTEIGEIAANHVI 642

Query: 333 LHGPR-PDRVTMLSAVSASAQLGD 355
              PR P    +LS + A A L D
Sbjct: 643 NLEPRDPAPYVLLSNLYADAGLWD 666


>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/592 (39%), Positives = 361/592 (60%), Gaps = 13/592 (2%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG-----RRVFDEMSERNVVSWTSLICA 213
           Q+   I++ GF +     + L  F   C D   G      R+F+ +    +  +  +I A
Sbjct: 50  QIQTQILRTGFHQS---GDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKA 106

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             +    ++AV LF ++ EEG+ P++ T   V  A   L  +  G++V  ++ + G++ +
Sbjct: 107 FTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFD 166

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             + N+L+DMY + G V   +Q+F E   R++V  N ++S YV+     +A+ +   M  
Sbjct: 167 TYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQ 226

Query: 334 HGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               RP+  T++S +SA   L  L  G+  H YV R  L     I N ++DMY KCG   
Sbjct: 227 QSSLRPNEATVVSTLSACIALKMLELGKEIHRYV-REQLGFTIKIGNALVDMYCKCGHLS 285

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +A  IF+ M  KTV+ W S+++G +  G ++ ARE+F   P RD + W  M+ G  Q N 
Sbjct: 286 IAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNR 345

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           F++A+ LFR M  +R+  DR T+V + + C  LG L+  KWI+ YI++N I  D  + TA
Sbjct: 346 FDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTA 405

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L++M+A+CG  ++++++F  ++++D ++WT+ I  +AM G   +A+ELF EM++ G+KPD
Sbjct: 406 LIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPD 465

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            I F+GVL+ACSHGGLV +G   FRSMT ++ + P++ HYGC++DLLGRAG L EA +LI
Sbjct: 466 DITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELI 525

Query: 633 KSMPVEPNDVI---WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           +  P   N+VI   +G+LL+AC+ H NV++    A+R+  ++   S VH LL+NIYASA 
Sbjct: 526 EKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASAD 585

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           +W +V +VR +MK+ G++K+PG SS+EVNG VHEF  GD SHPEM  I SML
Sbjct: 586 RWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSML 637



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 166/557 (29%), Positives = 264/557 (47%), Gaps = 81/557 (14%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISK--VVCTCAQMGTFESLTYAQKAFDYYIKD 96
           LKNCK++  LKQ    IL+ G       ++K  V CT   +G   +L YA++ F+Y    
Sbjct: 39  LKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIG---NLHYAERIFNYI--- 92

Query: 97  NETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
                 LF+YN +I+ ++  G   +A+ L+ +L   G+ PD FT+PFV  A        E
Sbjct: 93  --DIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVRE 150

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G +V+G +VK G + D +V N L++ Y E G + + R+VF+EM +R+VVSW  LI    +
Sbjct: 151 GEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVK 210

Query: 217 RDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANA 274
               ++AV +F  M ++  ++PN  T+V  +SAC  L+ LELG  +  Y+ ++LG     
Sbjct: 211 CRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIK- 269

Query: 275 LMVNALVDMYMK-------------------------------CGAVDTAKQLFGECKDR 303
            + NALVDMY K                               CG +D A++LF     R
Sbjct: 270 -IGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVR 328

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           ++VL   +++ YV+     +A+A+  EM +    PDR T+++ ++  AQLG L  G+  H
Sbjct: 329 DVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIH 388

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
           GY+  N +     +   +I+MY KCG  E +  IF+ +  K   SW S+I GL  NG   
Sbjct: 389 GYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTS 448

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
            A E+F+E                               M+   +K D +T +GV SAC 
Sbjct: 449 KALELFAE-------------------------------MVQTGVKPDDITFIGVLSACS 477

Query: 484 YLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD----V 538
           + G ++   K   +      I   ++    L+D+  R G    A ++  +    +    V
Sbjct: 478 HGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIV 537

Query: 539 SAWTAAIGAMAMEGNGE 555
             + A + A    GN E
Sbjct: 538 PLYGALLSACRTHGNVE 554



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 208/449 (46%), Gaps = 59/449 (13%)

Query: 28  TTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           T P    +IG L   +   E ++ +  ++K GL       + ++   A++G  ++L   +
Sbjct: 134 TYPFVFKAIGCLGEVR---EGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNL---R 187

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLN 146
           + F+   + +  S     +N LI GY       +A+ ++  +     L P++ T    L+
Sbjct: 188 QVFEEMPQRDVVS-----WNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLS 242

Query: 147 ACTKSSAFGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           AC        G ++H  +  ++GF   + + N L++ Y +CG +   R +F++M  + V+
Sbjct: 243 ACIALKMLELGKEIHRYVREQLGFT--IKIGNALVDMYCKCGHLSIAREIFNDMPIKTVI 300

Query: 206 SWTSLICA---CARRDLPKE----------------------------AVYLFFEMVEEG 234
            WTS++     C + D  +E                            AV LF EM  + 
Sbjct: 301 CWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKR 360

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           + P+  T+V +++ CA+L  LE G  +  YIDE  +  +A++  AL++MY KCG ++ + 
Sbjct: 361 VSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSL 420

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           ++F   K+++     +I+      G   +AL +  EM+  G +PD +T +  +SA +  G
Sbjct: 421 EIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGG 480

Query: 355 DLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD---HMSNKTV 406
            +  GR     M   Y +   LE +      +ID+  + G+ + A  + +   +++N+ +
Sbjct: 481 LVEEGRKHFRSMTAVYQIEPKLEHY----GCLIDLLGRAGQLDEAEELIEKSPNVNNEVI 536

Query: 407 VS-WNSLIAGLIKNGDVESAREVFSEMPG 434
           V  + +L++    +G+VE    V   + G
Sbjct: 537 VPLYGALLSACRTHGNVEMGERVAKRLVG 565


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/666 (36%), Positives = 374/666 (56%), Gaps = 42/666 (6%)

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ-VHGAIVKMGFDRDVFVENCLIN 181
           + L  +L+ F    D   F  +L++C KS      V+ VH +++K GF  ++F++N LI+
Sbjct: 7   LKLAADLSSF---TDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLID 63

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-----------RDLPK--------- 221
            Y +CG + DGR+VFD+M +RN+ +W S++    +           R +P+         
Sbjct: 64  AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123

Query: 222 -----------EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
                      EA+  F  M +EG   N  +   V+SAC+ L ++  G +V + I +   
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF 183

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
            ++  + +ALVDMY KCG V+ A+++F E  DRN+V  N++++ + + G A EAL +   
Sbjct: 184 LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQM 243

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI-CNTMIDMYMKCG 389
           ML     PD VT+ S +SA A L  +  G+  HG V++N     D I  N  +DMY KC 
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           + + A  IFD M  + V++  S+I+G       ++AR +F++M  R+ +SWN ++ G TQ
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC---- 505
               EEA+ LF ++  E +     +   +  AC  L  L L    + ++ K+G       
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423

Query: 506 --DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D+ +  +L+DM+ +CG  +    VFR+M +RD  +W A I   A  G G +A+ELF E
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           ML  G KPD I  +GVL+AC H G V +G H F SMT   GV+P   HY CMVDLLGRAG
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAG 543

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L EA  +I+ MP++P+ VIWGSLLAAC+ H+N+ +  Y AE++ E++P  SG +VLLSN
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           +YA  GKW +V  VR  M+++G+ K PG S I++ G  H F   D+SHP    I S+L  
Sbjct: 604 MYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDI 663

Query: 744 MNCRLR 749
           +   +R
Sbjct: 664 LIAEMR 669



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 230/488 (47%), Gaps = 71/488 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS++ G++      EA+  +  +   G + ++++F  VL+AC+  +   +GVQVH  I 
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  F  DV++ + L++ Y +CG++ D +RVFDEM +RNVVSW SLI    +     EA+ 
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA-YIDELGMKANALMVNALVDMY 284
           +F  M+E  ++P+ VT+  VISACA L  +++G  V    +    ++ + ++ NA VDMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299

Query: 285 MKC-------------------------------GAVDTAKQLFGECKDRNLVLCNTIMS 313
            KC                                +   A+ +F +  +RN+V  N +++
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y + G   EAL++   +      P   +  + + A A L +L  G   H +VL++G + 
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419

Query: 374 WDS------ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
                    + N++IDMY+KCG  E    +F  M  +  VSWN++I G  +NG    A E
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +F E                               ML    K D +TM+GV SACG+ G 
Sbjct: 480 LFRE-------------------------------MLESGEKPDHITMIGVLSACGHAGF 508

Query: 488 LDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
           ++  +  ++ + ++ G+       T +VD+  R G  + A  +   M  + D   W + +
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568

Query: 546 GAMAMEGN 553
            A  +  N
Sbjct: 569 AACKVHRN 576


>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
          Length = 1822

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/495 (44%), Positives = 310/495 (62%), Gaps = 1/495 (0%)

Query: 350  SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            SA++   L     HG  +R G      + + ++ MY   G    +   F  ++   VV  
Sbjct: 1329 SAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCV 1388

Query: 410  NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
             +++A L   GDV++AR++F  MP RDH++W+ M+ G        EA+ LF  MLS    
Sbjct: 1389 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTT 1448

Query: 470  VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            V   T+V V +AC  +G LD  KW++ Y+   G+   ++L TALVDM+++CG    AM+V
Sbjct: 1449 VGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEV 1508

Query: 530  FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
            F  M +R+V  WT+A+  +AM G G + ++LF  M   GI+P+ + FV VL  CS  GLV
Sbjct: 1509 FESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLV 1568

Query: 590  NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            ++G   F SM D +GV P   HYGCMVDL GRAG L +A+  I  MP+EP++ +WG+LL 
Sbjct: 1569 DEGRACFDSM-DKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLN 1627

Query: 650  ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
            A + H +VD+  YA +++  ++ E    HV LSNIYA +  W  V+RVR  MK +G++K+
Sbjct: 1628 ASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKV 1687

Query: 710  PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
            PG S+IEV+GKVHEF  G   HP  N I  ML EM+ RLR  GY  +   VL D++E+EK
Sbjct: 1688 PGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEK 1747

Query: 770  KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
            +  +S HSEKLA+AFGLI   + + IR+VKNLR+C DCH + KLVSKV++REI++RD NR
Sbjct: 1748 EGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNR 1807

Query: 830  FHFFRQGSCSCSDFW 844
            FH F+ G CSC D+W
Sbjct: 1808 FHHFKGGECSCRDYW 1822



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 176/408 (43%), Gaps = 57/408 (13%)

Query: 39   LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
            L +    + L+  H H++  G    PS+++  +   A + +   L+YA+          +
Sbjct: 1218 LPSLAEASHLRALHAHLVVSGRLASPSHLAAFL---ASLASSNHLSYARLVLP------Q 1268

Query: 99   TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL------------- 145
              ATL  +N+ IR    +  G      +       + PD ++  F++             
Sbjct: 1269 RPATLLAHNAFIR---ALARGPRPCLAFAAFRDLPLPPDHYSLNFLVRAATALVASAAEE 1325

Query: 146  -NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD------------- 191
             +   + +A  + V  HGA V+ G   D  V++ +++ Y   GD+               
Sbjct: 1326 KHVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDV 1385

Query: 192  ------------------GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE 233
                               R +FD M +R+ V+W+++I         +EA+ LF EM+  
Sbjct: 1386 VCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSA 1445

Query: 234  GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
            G      T+V V++ACA++  L+ G  V  Y+   GM+ +  +  ALVDMY KCGAV TA
Sbjct: 1446 GTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTA 1505

Query: 294  KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
             ++F    +RN+    + +S     G+  E L +   M   G +P+ V+ ++ +   +  
Sbjct: 1506 MEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMA 1565

Query: 354  GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
            G +  GR C   + + G++ W      M+D+Y + G+ + A    + M
Sbjct: 1566 GLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDM 1613



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 31/245 (12%)

Query: 277  VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            V A+V      G VD A+ LF     R+ V  + +++ Y+ +G +REAL + DEML  G 
Sbjct: 1388 VTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGT 1447

Query: 337  RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
                 T++S ++A AQ+G L  G+  H YV   G++    +   ++DMY KCG    A  
Sbjct: 1448 TVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAME 1507

Query: 397  IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
            +F+ M+ + V +W S ++GL  NG                               M  E 
Sbjct: 1508 VFESMAERNVYTWTSAVSGLAMNG-------------------------------MGTEC 1536

Query: 457  MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
            ++LF+ M    I+ + V+ V V   C   G +D  +  +  ++K G+    +    +VD+
Sbjct: 1537 LQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDL 1596

Query: 517  FARCG 521
            + R G
Sbjct: 1597 YGRAG 1601


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/686 (36%), Positives = 384/686 (55%), Gaps = 46/686 (6%)

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L   L G  +  D   F  +LN C +S +  +  +VH  I+K  F  + F++N LI+ YG
Sbjct: 6   LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE------------ 232
           +CG +   R++FD M ERN+ SW S+ICA  +     +AV++F +M +            
Sbjct: 66  KCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISG 125

Query: 233 -------------------EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
                               G   N  +    +SACA LQ+L+LG ++ + +      ++
Sbjct: 126 FEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSD 185

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             M +ALVDMY KCG V+ A+ +F E   R+ V  N++++ Y + G   EAL I  EM+ 
Sbjct: 186 VYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIK 245

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL-----RNGLEGWDSICNTMIDMYMKC 388
            G  PD VT+ S VSA A +  +  G+  H  V+     RN L     + N ++DMY KC
Sbjct: 246 CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDL----ILGNALLDMYAKC 301

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
            +   A  IFD M  ++VVS  S+++G  K   V+ AR +FS M  +D I+WN ++ G T
Sbjct: 302 NRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCT 361

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH---- 504
           Q    EEA+ LFR++  E +     T   + +AC  L  L L +  ++++ K+G      
Sbjct: 362 QNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYG 421

Query: 505 --CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
              D+ +  +L+DM+ +CG  +   +VF+ M ++D  +W A I   A  G G +A+E+F 
Sbjct: 422 EDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFC 481

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           +ML  G  PD +  +GVL ACSH GL+++G + FRSMT  HG+ P   HY CMVDLLGRA
Sbjct: 482 KMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRA 541

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G L EA +LI+ M ++P+ ++WGSLLAAC+ H+N+ +  Y  +++ E+DPE SG +VLLS
Sbjct: 542 GYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLS 601

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           N+YA    W NV RVR  M+++G+ K PG S IE+ G+++ F   D+ H     I  +LR
Sbjct: 602 NMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLR 661

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQE 768
            +  +++ AGYVP + +   D DE++
Sbjct: 662 TILQQMKQAGYVPYVGSNEFDEDEEQ 687



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 240/510 (47%), Gaps = 76/510 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS+I G+   G   EA+  + ++ G G L ++++F   L+AC        G Q+H  + 
Sbjct: 119 WNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVY 178

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP-KEAV 224
           +  +  DV++ + L++ Y +CG +   + VFDEM+ R+ VSW SLI  C  ++ P  EA+
Sbjct: 179 RSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLI-TCYEQNGPVDEAL 237

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NALVDM 283
            +F EM++ G++P+ VT+  V+SACA +  ++ G ++ A + +     N L++ NAL+DM
Sbjct: 238 KIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDM 297

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL------------------------- 318
           Y KC  ++ A+ +F     R++V   +++S Y +                          
Sbjct: 298 YAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALI 357

Query: 319 ------GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
                 G   EAL +   +      P   T  + ++A A L DL  GR  H +VL++G  
Sbjct: 358 AGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417

Query: 373 ---GWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
              G DS   + N++IDMYMKCG  E  CR+F HM  K  VSWN++I G  +NG    A 
Sbjct: 418 FQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKAL 477

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
           EVF +                               ML      D VTM+GV  AC + G
Sbjct: 478 EVFCK-------------------------------MLESGEAPDHVTMIGVLCACSHAG 506

Query: 487 ALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAA 544
            LD  ++ + +   ++G+       T +VD+  R G  + A  +   M  + D   W + 
Sbjct: 507 LLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSL 566

Query: 545 IGAMAMEGN---GEQAVELFNEMLRQGIKP 571
           + A  +  N   GE  V+   E+  +   P
Sbjct: 567 LAACKVHRNIQLGEYVVKKLLEVDPENSGP 596



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 198/428 (46%), Gaps = 58/428 (13%)

Query: 35  SIGS-LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFES---LTYAQ 87
           S GS L  C  L +LK   Q H       L ++ +Y+S V    A +  +     + YAQ
Sbjct: 153 SFGSALSACAGLQDLKLGSQIH------SLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQ 206

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
             FD     +  S     +NSLI  Y   G   EA+ ++VE+   G+ PD+ T   V++A
Sbjct: 207 SVFDEMTVRSRVS-----WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261

Query: 148 CTKSSAFGEGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           C   SA  EG Q+H  +VK   F  D+ + N L++ Y +C  I + R +FD M  R+VVS
Sbjct: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321

Query: 207 -------------------------------WTSLICACARRDLPKEAVYLFFEMVEEGI 235
                                          W +LI  C +    +EA+ LF  +  E +
Sbjct: 322 ETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV 381

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK------ANALMVNALVDMYMKCGA 289
            P   T   +++ACA L +L+LG +  +++ + G +      ++  + N+L+DMYMKCG+
Sbjct: 382 WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGS 441

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           V+   ++F    +++ V  N ++  Y + G   +AL +  +ML  G  PD VTM+  + A
Sbjct: 442 VENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCA 501

Query: 350 SAQLGDLLCGR-MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVV 407
            +  G L  GR        ++GL         M+D+  + G  E A  + + MS     +
Sbjct: 502 CSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAI 561

Query: 408 SWNSLIAG 415
            W SL+A 
Sbjct: 562 VWGSLLAA 569


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 274/822 (33%), Positives = 423/822 (51%), Gaps = 47/822 (5%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           D+  +  L++C +L +    H HI +          + ++    ++G  ++   A++  D
Sbjct: 13  DAFYLHHLRSCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDT-HQARRLLD 71

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTK 150
              + N  S     +N LI  YS  G   E++  ++       +  D+FT+   L AC++
Sbjct: 72  EMPRRNAVS-----FNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSR 126

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
           +    EG  VH   V  G    VFV N L++ Y  CGD+ + RRVFD   ER+ VSW SL
Sbjct: 127 AGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSL 186

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG--DRVCAYIDEL 268
           +    R    +E + +F  M    +  NS  +  VI  C+       G  + V   + + 
Sbjct: 187 VSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKA 246

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA------R 322
           G+  +  + +A+VDMY K GA+  A  LF    D N+V+ N +++   R   A      R
Sbjct: 247 GLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVR 306

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL++  E+   G  P   T  S + A    GD+  G+  HG VL++  +G D I + +I
Sbjct: 307 EALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALI 366

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           D+Y        AC                          +E     F  +P +D ++W  
Sbjct: 367 DLYFNS-----AC--------------------------MEDGFRCFRSVPKQDVVTWTA 395

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           M+ G  Q  +FE A+ LF  +L   +K D  T+  V +AC  L  +   + +  +  K+G
Sbjct: 396 MISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSG 455

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
                 +  + + M+AR G+ + A+Q F+ ME  DV +W+A I + A  G   QA++ FN
Sbjct: 456 FDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFN 515

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           EM+   + P+ I F+GVLTACSHGGLV++G   +  M   +G+ P + H  C+VDLLGRA
Sbjct: 516 EMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRA 575

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G L +A   I+        V+W SLL +C+ H++++     A+RI EL P  SG +V L 
Sbjct: 576 GRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLY 635

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           N+Y  AG+ +  +++R  MKE+G++K PG S IE+   +H F +GD+SHPE N I + L 
Sbjct: 636 NMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLA 695

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           EM  ++ D     D + +        ++  ++ HSEKLA+A G+I   ++ PIRV+KNLR
Sbjct: 696 EMLSKI-DKLTTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLR 754

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCHS  KL+SK   REII+RD  RFH FR GSCSC D+W
Sbjct: 755 VCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/690 (35%), Positives = 387/690 (56%), Gaps = 40/690 (5%)

Query: 110 IRGYSC-IGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           I G  C +G   +A+  ++E+   G+ PD F  P VL AC      G G  VHG ++KMG
Sbjct: 153 IVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMG 212

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           F   VFV + L++ YG+CG + D R+VFD M E+NVV+W S+I    +  L +EA+ +F+
Sbjct: 213 FGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFY 272

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M  EGI+P  VT+   +SA A L  L  G +  A      +  + ++ +++++ Y K G
Sbjct: 273 DMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVG 332

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            ++ A+ +F    ++++V  N ++S+YV+     +AL +   M     R D VT+ S +S
Sbjct: 333 LIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILS 392

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK---- 404
           ASA   ++  G+  H Y +R  LE    + N++IDMY KC + + A ++FD  + +    
Sbjct: 393 ASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVL 452

Query: 405 -------------------------------TVVSWNSLIAGLIKNGDVESAREVFSEMP 433
                                           V+SWNS+I G ++NG V  A+++FS+M 
Sbjct: 453 WNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQ 512

Query: 434 G----RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                 + I+W T++ GL Q     EA+  F+ M    I+    ++  V  AC  + +L 
Sbjct: 513 SLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLW 572

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
             + I+ +I ++     + +AT+LVDM+A+CG    A +VF  M  +++  + A I A A
Sbjct: 573 YGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYA 632

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
           + G   +A+ LF  + ++GI+PDSI F  +L+ACSH GLVN+G +LF  M   H ++P +
Sbjct: 633 LHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIM 692

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HYGC+V LL R G L EAL LI +MP +P+  I GSLL AC++H  +++  Y ++ + +
Sbjct: 693 EHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFK 752

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           L+P  SG +V LSN YA+AG+W  V+ +R  MK +G+RK PG S I+  GK++ F +GD 
Sbjct: 753 LEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDG 812

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
           SHP+   I +ML  +   +R  GYVP  +N
Sbjct: 813 SHPKTEEIYAMLAMLLSEMRFMGYVPIASN 842



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 260/530 (49%), Gaps = 39/530 (7%)

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG--FDRDVFVENCLINFYG 184
           +E   F I P+   +  +L  C    A   G Q+H  I+K G  F ++ +VE  L+ FY 
Sbjct: 70  MEFEDFQIGPE--IYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYA 127

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +C       R+F  +  RNV SW +++    R    ++A+  F EM E G+ P++  +  
Sbjct: 128 KCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPN 187

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V+ AC  LQ + LG  V  Y+ ++G  A   + ++LVDMY KCG ++ A+++F    ++N
Sbjct: 188 VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKN 247

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +V  N+++  YV+ GL +EA+ +  +M + G  P RVT+ S +SASA L  L+ G+  H 
Sbjct: 248 VVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHA 307

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
             + N L+  + + +++I+ Y K G  E A  +F  M  K VV+WN LI+  +       
Sbjct: 308 IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYV------- 360

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                                   Q +   +A+ +  +M SE ++ D VT+  + SA   
Sbjct: 361 ------------------------QHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAV 396

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
              + L K  + Y  +  +  D+ +A +++DM+A+C     A +VF    +RD+  W   
Sbjct: 397 TSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTL 456

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           + A A  G   +A++LF +M    + P+ I +  V+      G VN+   +F  M  + G
Sbjct: 457 LAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSL-G 515

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAAC 651
             P ++ +  ++  L ++G   EA+   + M    + P+     S+L AC
Sbjct: 516 FQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLAC 565



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 47/310 (15%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K+ HC+ +++ L       + ++   A+    E +  A+K FD     + T   L ++N+
Sbjct: 404 KEGHCYCIRRNLESDVVVANSIIDMYAKC---ERIDDARKVFD-----STTERDLVLWNT 455

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           L+  Y+ +GL  EA+ L+ ++    + P+  ++  V+                     +G
Sbjct: 456 LLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI---------------------LG 494

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMS----ERNVVSWTSLICACARRDLPKEAV 224
           F R+              G + + + +F +M     + N+++WT+LI   A+     EA+
Sbjct: 495 FLRN--------------GQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAI 540

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             F +M E GI+P+  ++  V+ AC  + +L  G  +  +I       +  +  +LVDMY
Sbjct: 541 LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMY 600

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KCG++D AK++F     + L + N ++S Y   G A EALA+   +   G  PD +T  
Sbjct: 601 AKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFT 660

Query: 345 SAVSASAQLG 354
           S +SA +  G
Sbjct: 661 SILSACSHAG 670



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 1/196 (0%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
            L  + +LI G +  G G EAI  + ++   GI P   +   VL ACT   +   G  +H
Sbjct: 519 NLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIH 578

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G I +  F   V V   L++ Y +CG I + ++VF  MS + +  + ++I A A      
Sbjct: 579 GFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAV 638

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA-YIDELGMKANALMVNAL 280
           EA+ LF  + +EGI+P+S+T   ++SAC+    +  G  + A  + +  M         +
Sbjct: 639 EALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCV 698

Query: 281 VDMYMKCGAVDTAKQL 296
           V +  +CG +D A +L
Sbjct: 699 VSLLSRCGNLDEALRL 714



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           S+   +  L ++   +E++ L   M  E  ++       +   C Y  AL   + I+A I
Sbjct: 46  SYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARI 105

Query: 499 EKNG--IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            KNG     +  + T LV  +A+C  P+ A+++F R+  R+V +W A +G     G  E 
Sbjct: 106 LKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSED 165

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC-- 614
           A+  F EM   G+ PD+ V   VL AC    L+  G         +HG   ++    C  
Sbjct: 166 ALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLG-------KGVHGYVLKMGFGACVF 218

Query: 615 ----MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA-CQKHQNVD-IAAYAAERIT 668
               +VD+ G+ G+L +A  +  SM VE N V W S++    Q   N + I  +   R+ 
Sbjct: 219 VSSSLVDMYGKCGVLEDARKVFDSM-VEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVE 277

Query: 669 ELDPEKSGVHVLLS 682
            ++P +  V   LS
Sbjct: 278 GIEPTRVTVASFLS 291



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 2/118 (1%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           +S  L +YN++I  Y+  G  VEA++L+  L   GI PD  TF  +L+AC+ +    EG+
Sbjct: 617 SSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGL 676

Query: 159 QVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
            +   +V K   +  +    C+++    CG++ +  R+   M  + +     SL+ AC
Sbjct: 677 NLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTAC 734


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/694 (35%), Positives = 385/694 (55%), Gaps = 34/694 (4%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-- 234
           N  I      G+I   R  F+ M  R   S+ +L+    R  LP  A+ LF  M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 235 -----IKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL------GMKANALMV------ 277
                I   S+    +  A A L ++     V ++   L      G+ A+A+ +      
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 278 ------NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
                   L+   +  G V+ A++LF E  DR++V    ++S Y + G   EA A+ DEM
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
               P+ + V+  + +S  AQ G++   R     +       W      M+  Y++ G  
Sbjct: 201 ----PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW----TAMLVGYIQAGHV 252

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           E A  +F+ M    V + N+++ G  + G V++A+ VF +M  RD  +W+ M+    Q  
Sbjct: 253 EDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNE 312

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+  FR ML   ++ +  +++ + + C  L  LD  + ++A + +     D+   +
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           AL+ M+ +CG+  +A +VF   E +D+  W + I   A  G GEQA+ +F++M   G+ P
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSP 432

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D I ++G LTACS+ G V +G  +F SMT    + P   HY CMVDLLGR+GL+ EA DL
Sbjct: 433 DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL 492

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           IK+MPVEP+ VIWG+L+ AC+ H+N +IA  AA+++ EL+P  +G +VLLS+IY S G+W
Sbjct: 493 IKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRW 552

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE-SHPEMNNISSMLREMNCRLRD 750
            + +++R  +  + + K PG S IE + +VH FTSGD  +HPE   I  +L +++  L +
Sbjct: 553 EDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLME 612

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           +GY  D + VL D+DE++K + L +HSE+ A+A+GL+   + MPIRV+KNLR+C DCHS 
Sbjct: 613 SGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSA 672

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KL++K+  REI++RD NRFH F+ G CSC D+W
Sbjct: 673 IKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 206/457 (45%), Gaps = 55/457 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHGA 163
           + SL+RGY   GL  +AI L+ ++      P++   ++  +L     +    E  ++   
Sbjct: 115 FTSLLRGYVRHGLLADAIRLFQQM------PERNHVSYTVLLGGLLDAGRVNEARRLFDE 168

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +     DRDV     +++ Y + G I + R +FDEM +RNVVSWT++I   A+      A
Sbjct: 169 MP----DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLA 224

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA-NALMVNALVD 282
             LF  M E     N V+   ++    +  ++E    +   + E  + A NA+MV     
Sbjct: 225 RKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG---- 276

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            + + G VD AK +F + ++R+    + ++  Y +     EAL+   EML  G RP+  +
Sbjct: 277 -FGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPS 335

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           ++S ++  A L  L  GR  H  +LR   +      + +I MY+KCG  + A R+F    
Sbjct: 336 VISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K +V WNS+I G  ++G  E A  +F +M           L G++              
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDM----------RLAGMSP------------- 432

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG 521
                   D +T +G  +AC Y G +   + I+  +  N  I    +  + +VD+  R G
Sbjct: 433 --------DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
             + A  + + M  + D   W A +GA  M  N E A
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           + M+NS+I GY+  GLG +A+ ++ ++   G+ PD  T+   L AC+ +    EG ++  
Sbjct: 399 IVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFN 458

Query: 163 AI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
           ++ V           +C+++  G  G + +   +   M  E + V W +L+ AC
Sbjct: 459 SMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/577 (39%), Positives = 350/577 (60%), Gaps = 34/577 (5%)

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           ++    +AL+ MY  C     A++ F E    N V+   + S YVR  L   +LA+  ++
Sbjct: 123 SDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKL 182

Query: 332 LLHGPRP--DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           +  G     D    L A SASA++ D       H  V++ GL+G   + NTM+D Y K G
Sbjct: 183 IASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGG 242

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           ++                             D+ +AR+VF  M  +D +SWN+M+    Q
Sbjct: 243 RR-----------------------------DLGAARKVFDTME-KDVVSWNSMIALYAQ 272

Query: 450 ENMFEEAMELFRVML--SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
             M  +A+ L+R ML  S  IK + VT+  +  AC + G +   K I+  + + G+  ++
Sbjct: 273 NGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENV 332

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            + T++VDM+++CG  + A + F++++++++ +W+A I    M G+G++A+++FNEM R 
Sbjct: 333 YVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRS 392

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G  P+ I F+ VL ACSH GL+++G + + +M    G+ P + HYGCMVDLLGRAG L E
Sbjct: 393 GQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDE 452

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A  LIK M V+P+  IWG+LL+AC+ H+NV++A  +A+R+ ELD    G +VLLSNIYA 
Sbjct: 453 AYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAE 512

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
           AG W +V R+R+ +K +GI K PG SS+E+ G+ H F  GD+SHP+   I S L ++  +
Sbjct: 513 AGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEK 572

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           +++AGYVP+  +VL D+DE+EK   L  HSEKLA+AF L+++     I V+KNLR+C DC
Sbjct: 573 MQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDC 632

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H+  KL++K+  REIIVRD  RFH F+ GSCSC D+W
Sbjct: 633 HTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 201/412 (48%), Gaps = 45/412 (10%)

Query: 157 GVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           G Q+H   ++ G F  D F  + L++ Y  C   +D R+ FDE+   N V  T++     
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 216 RRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           R +L   ++ LF +++  G     +    +   SA A++ +  +   + A + + G+  +
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 274 ALMVNALVDMYMKCGAVD--TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           A +VN ++D Y K G  D   A+++F +  ++++V  N++++ Y + G++ +AL +  +M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVF-DTMEKDVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 332 L-LHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           L + G  + + VT+ + + A A  G +  G+  H  V+R GLE    +  +++DMY KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM--PGRDHISWNTMLGGL 447
           + EMA + F  +  K ++SW+++I G   +G  + A ++F+EM   G++           
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQN----------- 395

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCD 506
                                  + +T + V +AC + G LD  ++ Y  ++K  GI   
Sbjct: 396 ----------------------PNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPG 433

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           ++    +VD+  R G    A  + + M+ K D + W A + A  +  N E A
Sbjct: 434 VEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELA 485



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 195/394 (49%), Gaps = 20/394 (5%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPF 143
           A+KAFD     N    T     ++  GY    L   +++L+ +L  +G     D+     
Sbjct: 144 ARKAFDEIPSPNPVIIT-----AMASGYVRNNLVYPSLALFRKLIASGSATAVDEAAALV 198

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG--DIVDGRRVFDEMSE 201
             +A  +    G    +H  +VK G D D  V N +++ Y + G  D+   R+VFD M E
Sbjct: 199 AFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-E 257

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEM--VEEGIKPNSVTMVCVISACAKLQNLELGD 259
           ++VVSW S+I   A+  +  +A+ L+ +M  V   IK N+VT+  ++ ACA    ++ G 
Sbjct: 258 KDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGK 317

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            +   +  +G++ N  +  ++VDMY KCG V+ A++ F + K++N++  + +++ Y   G
Sbjct: 318 CIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHG 377

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV-LRNGLEGWDSIC 378
             +EAL I +EM   G  P+ +T +S ++A +  G L  GR  +  +  R G+E      
Sbjct: 378 HGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHY 437

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVE----SAREVFSEMP 433
             M+D+  + G  + A  +   M  K   + W +L++    + +VE    SA+ +F E+ 
Sbjct: 438 GCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLF-ELD 496

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
             +   +  +L  +  E    + +E  RV++  R
Sbjct: 497 ATN-CGYYVLLSNIYAEAGMWKDVERMRVLVKTR 529



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 10/253 (3%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H  ++K GL      ++ ++   A+ G    L  A+K FD   KD      +  +NS+I 
Sbjct: 216 HALVVKTGLDGDAGVVNTMLDAYAKGGR-RDLGAARKVFDTMEKD------VVSWNSMIA 268

Query: 112 GYSCIGLGVEAISLYVELAGFG--ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
            Y+  G+  +A+ LY ++      I  +  T   +L AC  +     G  +H  +V+MG 
Sbjct: 269 LYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGL 328

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           + +V+V   +++ Y +CG +   R+ F ++ E+N++SW+++I         +EA+ +F E
Sbjct: 329 EENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNE 388

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDR-VCAYIDELGMKANALMVNALVDMYMKCG 288
           M   G  PN +T + V++AC+    L+ G     A     G++        +VD+  + G
Sbjct: 389 MCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAG 448

Query: 289 AVDTAKQLFGECK 301
            +D A  L  E K
Sbjct: 449 CLDEAYGLIKEMK 461



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 131/344 (38%), Gaps = 72/344 (20%)

Query: 359 GRMCHGYVLRNGLEGWDSI-CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
           GR  H   +R+GL   D    + ++ MY  C +   A + FD                  
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFD------------------ 149

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS--ERIKVDRVTM 475
                        E+P  + +    M  G  + N+   ++ LFR +++      VD    
Sbjct: 150 -------------EIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVDEAAA 196

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG--DPQRAMQVFRRM 533
           +   SA   +    +   ++A + K G+  D  +   ++D +A+ G  D   A +VF  M
Sbjct: 197 LVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM 256

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR--QGIKPDSIVFVGVLTACSHGGLVNQ 591
           EK DV +W + I   A  G    A+ L+ +ML     IK +++    +L AC+H G +  
Sbjct: 257 EK-DVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQT 315

Query: 592 GW---------------HLFRSMTDIHG---------------VSPQIVHYGCMVDLLGR 621
           G                ++  S+ D++                    I+ +  M+   G 
Sbjct: 316 GKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGM 375

Query: 622 AGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIAAY 662
            G   EALD+   M      PN + + S+LAAC     +D   Y
Sbjct: 376 HGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRY 419


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/686 (36%), Positives = 379/686 (55%), Gaps = 41/686 (5%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           +  L  C +   L + H  +++  LG  P    ++V   A   +   + YA+K FD    
Sbjct: 22  LAHLDACASRANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFD---- 77

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF- 154
                 T  ++N +IRGY+     ++A+ L+  +   G+ PD +T   V  +    +++ 
Sbjct: 78  -RMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWK 136

Query: 155 --GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G  VH  + ++GF  D+FV + LINFYG    + D R+VF+EM ER+VVSWT +I 
Sbjct: 137 GRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMIS 196

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
           A A+       +    EM  EG KPN +T++ ++SAC +++ ++ G  V A +DE G++A
Sbjct: 197 AFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEA 256

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +  + NAL+ MY+KCG +  A + F     RN    NT++  +V+ G  +EAL + +EML
Sbjct: 257 DVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEML 316

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G  PD +T++S +S  AQLGDL  GR  H Y+  + +     + N++I+MY KC    
Sbjct: 317 SDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKC---- 372

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
                                      GD+ +A  +F  M  RD +SW  M+ G  +   
Sbjct: 373 ---------------------------GDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQ 405

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           F  A  LF  M    +    + +V + SAC  LGALD  + I++YI++  +  DM L +A
Sbjct: 406 FRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESA 465

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-QGIKP 571
           LVDM+A+CG    A ++F RM  +   AW A IG +A +G G++AV LF ++L+ +  KP
Sbjct: 466 LVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKP 525

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           D+I    VL AC+H G+V++G H F  M  + G+ P   HYGC+VDLLGRAGLL EA + 
Sbjct: 526 DAITLKVVLCACTHVGMVDEGLHYFNLMLTL-GIVPDNEHYGCIVDLLGRAGLLDEAYNF 584

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
           I+ MP++PN VIWGSLLAAC+ H  +++     + I +L P   G HVL+SN++A  G+W
Sbjct: 585 IQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHVLISNLHAEEGQW 644

Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEV 717
            +V +VR  M  + + K PG SSI+V
Sbjct: 645 DDVEQVRGMMGSRRVEKSPGHSSIQV 670


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/706 (35%), Positives = 383/706 (54%), Gaps = 78/706 (11%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG-ECGDIVD-GRRVFDEMSE 201
           +LN C   + F    Q+H  ++K+G + D F+   L++       D +D   R+F     
Sbjct: 11  LLNICKSLTTFK---QIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPN 67

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP-NSVTMVCVISACAKLQNLELGDR 260
            +V    +LI      D P++++  F EM      P +S +   ++ A A L+++ +G +
Sbjct: 68  PDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQ 127

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
                         L   ALV        +DT           +L +  T++S Y   G 
Sbjct: 128 --------------LHCQALVH------GLDT-----------HLFVGTTLISMYGECGF 156

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
              A  + DEM    P P+ +   + V+A  + GD+  GR                    
Sbjct: 157 VGFARKVFDEM----PEPNAIAWNAMVTACCRGGDMKGGR-------------------- 192

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
                           +FD M  + ++SWN ++AG  K G++E ARE+F EMP +D +SW
Sbjct: 193 ---------------ELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSW 237

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           +TM+ G      FEEA   FR +  + ++ +  ++ GV SAC   GAL+  K ++ +IEK
Sbjct: 238 STMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEK 297

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRR-MEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           +G+   + +  AL+D +++CG+   A  VF R M +R++ +WT+ + A+AM G+GE+A+ 
Sbjct: 298 SGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIG 357

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           +F++M   GI+PD I F+ +L ACSH GLV QG   F  M  ++ + P I HYGCMVDL 
Sbjct: 358 IFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLY 417

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L +A + +  MP+    +IW +LL AC  H +V +A    ER++ELDP  S  HV
Sbjct: 418 GRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHV 477

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN YA AGKW + A VR  M EQ I K PG S IEV+  ++ F +G + +        
Sbjct: 478 LLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYK 537

Query: 740 MLREMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
            L+E+  RLR + GYVP++  VL D++E+EK+  +S HSEKLA+AFG+    K   IR+V
Sbjct: 538 KLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIV 597

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH+  KL+S++Y  EI+VRD +RFH F+ G CSC D+W
Sbjct: 598 KNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 247/550 (44%), Gaps = 59/550 (10%)

Query: 31  KDSPSIGSLKN-CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKA 89
           K  P   SL N CK+L   KQ H ++LK GL   P    K++  CA +   +SL YA + 
Sbjct: 3   KTEPLCLSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCA-ISLSDSLDYACRL 61

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP-DKFTFPFVLNAC 148
           F Y       +  +FM+N+LIRG        +++  ++E+      P D F+F F++ A 
Sbjct: 62  FRY-----TPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAA 116

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
               +   G+Q+H   +  G D  +FV   LI+ YGECG +   R+VFDEM E N ++W 
Sbjct: 117 ANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWN 176

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           +++ AC R    K    LF                                       +L
Sbjct: 177 AMVTACCRGGDMKGGRELF---------------------------------------DL 197

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
               N +  N ++  Y K G ++ A+++F E   ++ V  +T++  +   G   EA +  
Sbjct: 198 MPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFF 257

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            E+   G RP+  ++   +SA AQ G L  G++ HG++ ++GL    S+ N ++D Y KC
Sbjct: 258 RELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKC 317

Query: 389 GKQEMACRIFDH-MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTM 443
           G   MA  +F+  M+ + +VSW S++A L  +G  E A  +F +M       D I++ ++
Sbjct: 318 GNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISL 377

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG-VASACGYLGALDLAKWIYAYIEKNG 502
           L   +   + E+  E F  M         +   G +    G  G L  A   Y ++ +  
Sbjct: 378 LYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKA---YEFVCQMP 434

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI---GAMAMEGNGEQAVE 559
           I C   +   L+   +  GD + A QV  R+ + D +  +  +    A A+ G  + A  
Sbjct: 435 IPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAAS 494

Query: 560 LFNEMLRQGI 569
           +   M  Q I
Sbjct: 495 VRRSMTEQRI 504


>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 1116

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/527 (42%), Positives = 333/527 (63%), Gaps = 13/527 (2%)

Query: 324 ALAILDEMLLHGPRPDRVT---MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           AL++   M LH   PD  T   +L +++   +      GR  H  +L  GL     +  +
Sbjct: 47  ALSLYLRMRLHAVLPDLHTFPFLLQSINTPHR------GRQLHAQILLLGLANDPFVQTS 100

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +I+MY  CG    A + FD ++   + SWN++I    K G +  AR++F +MP ++ ISW
Sbjct: 101 LINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISW 160

Query: 441 NTMLGGLTQENMFEEAMELFRVMLS---ERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           + M+ G      ++ A+ LFR + +    +++ +  TM  V SAC  LGAL   KW++AY
Sbjct: 161 SCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAY 220

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQ 556
           I+K G+  D+ L T+L+DM+A+CG  +RA  +F  +  ++DV AW+A I A +M G  E+
Sbjct: 221 IDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEE 280

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
            +ELF  M+  G++P+++ FV VL AC HGGLV++G   F+ M + +GVSP I HYGCMV
Sbjct: 281 CLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMV 340

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
           DL  RAG + +A +++KSMP+EP+ +IWG+LL   + H +V+    A  ++ ELDP  S 
Sbjct: 341 DLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSS 400

Query: 677 VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
            +VLLSN+YA  G+W  V  +R  M+ +GI+KLPG S +EV+G + EF +GD SHPE+ N
Sbjct: 401 AYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLN 460

Query: 737 ISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIR 796
           +  ML E+  RL   GY  +   VLLD+DE+ K++ LS HSEKLA+A+  + TS    IR
Sbjct: 461 LYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPGTTIR 520

Query: 797 VVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           +VKNLR+C DCH   K++SK ++REIIVRD NRFH F+ G CSC D+
Sbjct: 521 IVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFKNGLCSCKDY 567



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 181/366 (49%), Gaps = 52/366 (14%)

Query: 104 FMYNSLIRGYSCIGLG----VEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           F++N+LIR  +   +       A+SLY+ +    +LPD  TFPF+L +         G Q
Sbjct: 25  FVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSINTPH---RGRQ 81

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  I+ +G   D FV+  LIN Y  CG     R+ FDE+++ ++ SW ++I A A+  +
Sbjct: 82  LHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGM 141

Query: 220 PKEAVYLFFEMVEEGI----------------------------------KPNSVTMVCV 245
              A  LF +M E+ +                                  +PN  TM  V
Sbjct: 142 IHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSV 201

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC-KDRN 304
           +SACA+L  L+ G  V AYID+ GMK + ++  +L+DMY KCG+++ AK +F     +++
Sbjct: 202 LSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKD 261

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG----- 359
           ++  + +++ +   GL+ E L +   M+  G RP+ VT ++ + A    G +  G     
Sbjct: 262 VMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFK 321

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIK 418
           RM + Y +   ++ +      M+D+Y + G+ E A  +   M     V+ W +L+ G   
Sbjct: 322 RMMNEYGVSPMIQHY----GCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARI 377

Query: 419 NGDVES 424
           +GDVE+
Sbjct: 378 HGDVET 383


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/696 (34%), Positives = 393/696 (56%), Gaps = 33/696 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NSLI GY   G   +A+ +Y +    G++PD FT   VL AC    A  EGV VHG I 
Sbjct: 190 WNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G   DV + N L++ Y +   + + RRVF +M+ ++ V+W ++IC  A+    + +V 
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF +M++ G  P+ +++   I AC +  +L++G  V  Y+   G + + +  N L+DMY 
Sbjct: 310 LFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +  A+++F   K ++ V  N++++ Y + G  +E L    +M+    +PD VT + 
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVL 427

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +S  +QL D+  GR  H  V++ G E    I N+++D+Y KCG                
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG---------------- 471

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                          +++   +VFS M   D ISWNT++      +      ++   M +
Sbjct: 472 ---------------EMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRT 516

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
           E +  D  T++G+   C  L      K I+ YI K+G   ++ +  AL++M+++CG  + 
Sbjct: 517 EGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLEN 576

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
            ++VF+ M+++DV  WTA I A  M G G++A++ F +M   G+ PDS+ F+  + ACSH
Sbjct: 577 CIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSH 636

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            G+V +G   F  M   + + P++ HY C+VDLL R+GLL +A + I SMP++P+  +WG
Sbjct: 637 SGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWG 696

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL+AC+   N +IA   +++I EL+ + +G +VL+SNIYA+ GKW  V  VR  MK +G
Sbjct: 697 ALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKG 756

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K PGSS IE+  +V+ F +GD+S  + + +  +L  +   +   GYV DL   L DV+
Sbjct: 757 LKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVE 816

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
           E +K+ +L  HSE+LA+AFGL++T    P+ +   L
Sbjct: 817 EDDKRDMLCGHSERLAIAFGLLNTKPGSPLLIFPTL 852



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 169/622 (27%), Positives = 299/622 (48%), Gaps = 50/622 (8%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           S  + +L + K   +L+  H  I+  GL     +  K++   AQ+    S     ++   
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSI-- 80

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
                  +  ++++NS+IR  +  GL  +A+  Y E+    + PD FTFP V+N+C +  
Sbjct: 81  -----SPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARIL 135

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G  VH   ++MGF+ D+++ N LI+ Y    D+ + R VF+EMS R+ VSW SLI 
Sbjct: 136 DLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLIS 195

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
                   ++A+ ++ +    G+ P+  TM  V+ AC  L  ++ G  V   I+++G+  
Sbjct: 196 GYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAG 255

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           + ++ N L+ MY K   +  A+++F +   ++ V  NT++  Y +LG    ++ +  +M 
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM- 314

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           + G  PD +++ S + A  Q GDL  G+  H Y++ +G E     CN +IDMY KCG   
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLL 374

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +FD    K  V+WNSLI                                G TQ   
Sbjct: 375 AAQEVFDTTKCKDSVTWNSLI-------------------------------NGYTQSGY 403

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           ++E +E F++M  ER K D VT V + S    L  ++  + I+  + K G   ++ +  +
Sbjct: 404 YKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNS 462

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+D++A+CG+    ++VF  M   D+ +W   I +     +     ++ NEM  +G+ PD
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPD 522

Query: 573 SIVFVGVLTACSHGGLVNQG----WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
               +G+L  CS   +  QG     ++F+S     G    +     ++++  + G L   
Sbjct: 523 EATVLGILPMCSLLAVRRQGKEIHGYIFKS-----GFESNVPIGNALIEMYSKCGSLENC 577

Query: 629 LDLIKSMPVEPNDVIWGSLLAA 650
           + + K M  E + V W +L++A
Sbjct: 578 IKVFKYMK-EKDVVTWTALISA 598


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/728 (33%), Positives = 390/728 (53%), Gaps = 45/728 (6%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCL 179
           EA   + E+   G+    +++  +  AC +  +   G  +H  + +MG +   V ++NC+
Sbjct: 64  EAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRM-RMGIENPSVLLQNCV 122

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           +  Y ECG + D  ++FDEMS+ N VS T++I A A + L  +AV LF  M+E G KP S
Sbjct: 123 LQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPS 182

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
                ++ +    + L++G ++ A++   G+ +NA +   +V+MY+KCG +  AK++F +
Sbjct: 183 SMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQ 242

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              +  V    +M  Y + G AR+AL +  +++  G   D       + A A L +L  G
Sbjct: 243 MAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFG 302

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           +  H  V + GLE   S+   ++D Y+KC   E ACR F  +     VSW+++I+G    
Sbjct: 303 KQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG---- 358

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGV 478
                                        Q + FEEA++ F+ + S+  + ++  T   +
Sbjct: 359 ---------------------------YCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSI 391

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC  L   ++   ++A   K  +       +AL+ M+++CG    A +VF  M+  D+
Sbjct: 392 FQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDI 451

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            AWTA I   A  GN  +A+ LF +M+  G+KP+S+ F+ VLTACSH GLV QG H   +
Sbjct: 452 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDT 511

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M   + V+P I HY CM+D+  R+GLL EAL  +K+MP EP+ + W   L+ C  H+N++
Sbjct: 512 MLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLE 571

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +   A E + +LDPE +  +VL  N+Y  AGKW   A V   M E+ ++K    S I+  
Sbjct: 572 LGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEK 631

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           GK+H F  GD+ HP+   I   L+E +  +    +   +T         E++  L  HSE
Sbjct: 632 GKIHRFIVGDKHHPQSQEIYEKLKEFDGFMEGDMFQCSMT---------ERREQLLDHSE 682

Query: 779 KLAMAFGLISTSKT--MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           +LA+AFGLIS +     PI+V KNLR C DCH FAK VS V   EI++RD+ RFH F++G
Sbjct: 683 RLAIAFGLISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEG 742

Query: 837 SCSCSDFW 844
            CSC+D+W
Sbjct: 743 KCSCNDYW 750



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 225/499 (45%), Gaps = 40/499 (8%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SL  A K FD     N  S T     ++I  Y+  GL  +A+ L+  +   G  P    +
Sbjct: 131 SLEDADKLFDEMSDLNAVSRT-----TMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMY 185

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L +     A   G Q+H  +++ G   +  +E  ++N Y +CG +V  +RVFD+M+ 
Sbjct: 186 TTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAV 245

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           +  V+WT L+    +    ++A+ LF +++ EG++ +S     V+ ACA L+ L  G ++
Sbjct: 246 KKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQI 305

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A + +LG++    +   LVD Y+KC + ++A + F E ++ N V  + I+S Y ++   
Sbjct: 306 HACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 365

Query: 322 REALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            EA+     +        +  T  S   A + L D   G   H   ++  L G     + 
Sbjct: 366 EEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 425

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +I MY KCG  + A  +F+ M N  +V+W + I+G    G+                   
Sbjct: 426 LITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNA------------------ 467

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIE 499
                         EA+ LF  M+S  +K + VT + V +AC + G ++  K ++   + 
Sbjct: 468 -------------SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLR 514

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAV 558
           K  +   +     ++D++AR G    A++  + M  + D  +W   +       N E   
Sbjct: 515 KYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELG- 573

Query: 559 ELFNEMLRQGIKPDSIVFV 577
           ++  E LRQ    D+  +V
Sbjct: 574 KIAGEELRQLDPEDTAGYV 592



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 2/208 (0%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N  L  L++     EA E F+ M    + V   +   +  AC  L +L   + ++  +  
Sbjct: 50  NLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRM 109

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
              +  + L   ++ M+  CG  + A ++F  M   +  + T  I A A +G  ++AV L
Sbjct: 110 GIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGL 169

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F+ ML  G KP S ++  +L +  +   ++ G  +   +      S   +  G +V++  
Sbjct: 170 FSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETG-IVNMYV 228

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           + G L  A  +   M V+   V W  L+
Sbjct: 229 KCGWLVGAKRVFDQMAVK-KPVAWTGLM 255


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 249/734 (33%), Positives = 390/734 (53%), Gaps = 63/734 (8%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           F+LN    + A  + +     +      R+++  N L++ Y +   + +  RVF  M  R
Sbjct: 45  FLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTR 104

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRV 261
           ++VSW SLI A A R    ++V  +  M+  G    N + +  ++   +K   + LG +V
Sbjct: 105 DMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQV 164

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL--- 318
             ++ + G ++   + + LVDMY K G V  A+Q F E  ++N+V+ NT+++  +R    
Sbjct: 165 HGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRI 224

Query: 319 ----------------------------GLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
                                       GL REA+ +  EM L     D+ T  S ++A 
Sbjct: 225 EDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTAC 284

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
             +  L  G+  H Y++R   +    + + ++DMY KC                      
Sbjct: 285 GGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCK--------------------- 323

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                      ++SA  VF +M  ++ +SW  ML G  Q    EEA+++F  M +  I+ 
Sbjct: 324 ----------SIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEP 373

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           D  T+  V S+C  L +L+     +     +G+   + ++ ALV ++ +CG  + + ++F
Sbjct: 374 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLF 433

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
             M   D  +WTA +   A  G   + + LF  ML  G KPD + F+GVL+ACS  GLV 
Sbjct: 434 SEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQ 493

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G  +F SM   H + P   HY CM+DL  RAG L EA   I  MP  P+ + W SLL++
Sbjct: 494 KGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSS 553

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H+N++I  +AAE + +L+P  +  ++LLS+IYA+ GKW  VA +R  M+++G+RK P
Sbjct: 554 CRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEP 613

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G S I+   +VH F++ D+S+P  + I S L ++N ++   GYVPD+ +VL DVD+ EK 
Sbjct: 614 GCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKI 673

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
            +L+HHSEKLA+AFGLI     +PIRVVKNLR+C DCH+  K +SK+  REI+VRD  RF
Sbjct: 674 KMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARF 733

Query: 831 HFFRQGSCSCSDFW 844
           H F+ G CSC DFW
Sbjct: 734 HLFKDGRCSCGDFW 747



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 159/582 (27%), Positives = 257/582 (44%), Gaps = 107/582 (18%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           LK+C+   + K+ HCHI+K     +   ++ +V   A+   F+ +TYA++ FD   + N 
Sbjct: 22  LKHCR---DTKKIHCHIIKAFRNPEIFLLNNLVSAYAK---FDRITYARRVFDQMPQRN- 74

Query: 99  TSATLFMYNSLIRGYSCIGL---------------GVEAISLYVELAGFGILPDK----- 138
               L+ +N+L+  YS +                  V   SL    AG G L        
Sbjct: 75  ----LYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYN 130

Query: 139 ---FTFPFVLNA---------CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
              +  PF LN           +K      G+QVHG +VK GF   VFV + L++ Y + 
Sbjct: 131 LMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKT 190

Query: 187 GDIVDGRRVFDEMSERNVV-------------------------------SWTSLICACA 215
           G +   R+ FDEM E+NVV                               SWT++I    
Sbjct: 191 GLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFT 250

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +  L +EA+ LF EM  E ++ +  T   V++AC  +  L+ G +V AYI     + N  
Sbjct: 251 QNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIF 310

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + +ALVDMY KC ++ +A+ +F +   +N+V    ++  Y + G + EA+ I  +M  +G
Sbjct: 311 VGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNG 370

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
             PD  T+ S +S+ A L  L  G   H   L +GL  + ++ N ++ +Y KCG  E + 
Sbjct: 371 IEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSH 430

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           R+F  MS    VSW +L++G  + G                                  E
Sbjct: 431 RLFSEMSYVDEVSWTALVSGYAQFGKA-------------------------------NE 459

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALV 514
            + LF  ML+   K D+VT +GV SAC   G +     I+ + I+++ I       T ++
Sbjct: 460 TLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMI 519

Query: 515 DMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           D+F+R G  + A +   +M    D   W + + +     N E
Sbjct: 520 DLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNME 561



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 219/434 (50%), Gaps = 34/434 (7%)

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C  L++     ++  +I +        ++N LV  Y K   +  A+++F +   RNL   
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 309 NTIMSNYVRL-------------------------------GLAREALAILDEMLLHGP- 336
           NT++S+Y +L                               G   +++   + ML +GP 
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
             +R+ + + +  +++ G +  G   HG+V++ G + +  + + ++DMY K G    A +
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
            FD M  K VV +N+LIAGL++   +E +R++F +M  +D ISW  M+ G TQ  +  EA
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           ++LFR M  E +++D+ T   V +ACG + AL   K ++AYI +     ++ + +ALVDM
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +C   + A  VFR+M  ++V +WTA +      G  E+AV++F +M   GI+PD    
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
             V+++C++   + +G   F     + G+   I     +V L G+ G + ++  L   M 
Sbjct: 379 GSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMS 437

Query: 637 VEPNDVIWGSLLAA 650
              ++V W +L++ 
Sbjct: 438 Y-VDEVSWTALVSG 450



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/379 (20%), Positives = 138/379 (36%), Gaps = 109/379 (28%)

Query: 376 SICNTMIDMYMKC-GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
           S+ N   ++   C   +++ C I     N  +   N+L++   K   +  AR VF +MP 
Sbjct: 13  SLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQ 72

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL--------- 485
           R+  SWNT+L   ++     E   +F  M + R  V   +++   +  G+L         
Sbjct: 73  RNLYSWNTLLSSYSKLACLPEMERVFHAMPT-RDMVSWNSLISAYAGRGFLLQSVKAYNL 131

Query: 486 ------------------------GALDLAKWIYAYIEKNGIHCDMQLATALVDMFA--- 518
                                   G + L   ++ ++ K G    + + + LVDM++   
Sbjct: 132 MLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTG 191

Query: 519 ----------------------------RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
                                       RC   + + Q+F  M+++D  +WTA I     
Sbjct: 192 LVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQ 251

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWH----- 594
            G   +A++LF EM  + ++ D   F  VLTAC            H  ++   +      
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFV 311

Query: 595 -------------------LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
                              +FR M         +V +  M+   G+ G   EA+ +   M
Sbjct: 312 GSALVDMYCKCKSIKSAETVFRKMN-----CKNVVSWTAMLVGYGQNGYSEEAVKIFCDM 366

Query: 636 P---VEPNDVIWGSLLAAC 651
               +EP+D   GS++++C
Sbjct: 367 QNNGIEPDDFTLGSVISSC 385


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/690 (35%), Positives = 387/690 (56%), Gaps = 40/690 (5%)

Query: 110  IRGYSC-IGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
            I G  C +G   +A+  ++E+   G+ PD F  P VL AC      G G  VHG ++KMG
Sbjct: 1248 IVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMG 1307

Query: 169  FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            F   VFV + L++ YG+CG + D R+VFD M E+NVV+W S+I    +  L +EA+ +F+
Sbjct: 1308 FGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFY 1367

Query: 229  EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            +M  EGI+P  VT+   +SA A L  L  G +  A      +  + ++ +++++ Y K G
Sbjct: 1368 DMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVG 1427

Query: 289  AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
             ++ A+ +F    ++++V  N ++S+YV+     +AL +   M     R D VT+ S +S
Sbjct: 1428 LIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILS 1487

Query: 349  ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK---- 404
            ASA   ++  G+  H Y +R  LE    + N++IDMY KC + + A ++FD  + +    
Sbjct: 1488 ASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVL 1547

Query: 405  -------------------------------TVVSWNSLIAGLIKNGDVESAREVFSEMP 433
                                            V+SWNS+I G ++NG V  A+++FS+M 
Sbjct: 1548 WNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQ 1607

Query: 434  G----RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                  + I+W T++ GL Q     EA+  F+ M    I+    ++  V  AC  + +L 
Sbjct: 1608 SLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLW 1667

Query: 490  LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
              + I+ +I ++     + +AT+LVDM+A+CG    A +VF  M  +++  + A I A A
Sbjct: 1668 YGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYA 1727

Query: 550  MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
            + G   +A+ LF  + ++GI+PDSI F  +L+ACSH GLVN+G +LF  M   H ++P +
Sbjct: 1728 LHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIM 1787

Query: 610  VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
             HYGC+V LL R G L EAL LI +MP +P+  I GSLL AC++H  +++  Y ++ + +
Sbjct: 1788 EHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFK 1847

Query: 670  LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
            L+P  SG +V LSN YA+AG+W  V+ +R  MK +G+RK PG S I+  GK++ F +GD 
Sbjct: 1848 LEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDG 1907

Query: 730  SHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            SHP+   I +ML  +   +R  GYVP  +N
Sbjct: 1908 SHPKTEEIYAMLAMLLSEMRFMGYVPIASN 1937



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 261/530 (49%), Gaps = 39/530 (7%)

Query: 127  VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG--FDRDVFVENCLINFYG 184
            +E   F I P+   +  +L  C    A   G Q+H  I+K G  F ++ +VE  L+ FY 
Sbjct: 1165 MEFEDFQIGPE--IYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYA 1222

Query: 185  ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
            +C       R+F  +  RNV SW +++    R    ++A+  F EM E G+ P++  +  
Sbjct: 1223 KCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPN 1282

Query: 245  VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
            V+ AC  LQ + LG  V  Y+ ++G  A   + ++LVDMY KCG ++ A+++F    ++N
Sbjct: 1283 VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKN 1342

Query: 305  LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
            +V  N+++  YV+ GL +EA+ +  +M + G  P RVT+ S +SASA L  L+ G+  H 
Sbjct: 1343 VVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHA 1402

Query: 365  YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
              + N L+  + + +++I+ Y K G  E A  +F  M  K VV+WN LI+  +++  V  
Sbjct: 1403 IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQV-- 1460

Query: 425  AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                                          +A+ +  +M SE ++ D VT+  + SA   
Sbjct: 1461 -----------------------------GKALNMCHLMRSENLRFDSVTLSSILSASAV 1491

Query: 485  LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
               + L K  + Y  +  +  D+ +A +++DM+A+C     A +VF    +RD+  W   
Sbjct: 1492 TSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTL 1551

Query: 545  IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
            + A A  G   +A++LF +M    + P+ I +  V+      G VN+   +F  M  + G
Sbjct: 1552 LAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSL-G 1610

Query: 605  VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAAC 651
              P ++ +  ++  L ++G   EA+   + M    + P+     S+L AC
Sbjct: 1611 FQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLAC 1660



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 47/310 (15%)

Query: 49   KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
            K+ HC+ +++ L       + ++   A+    E +  A+K FD     + T   L ++N+
Sbjct: 1499 KEGHCYCIRRNLESDVVVANSIIDMYAKC---ERIDDARKVFD-----STTERDLVLWNT 1550

Query: 109  LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
            L+  Y+ +GL  EA+ L+ ++    + P+  ++  V+                     +G
Sbjct: 1551 LLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI---------------------LG 1589

Query: 169  FDRDVFVENCLINFYGECGDIVDGRRVFDEMS----ERNVVSWTSLICACARRDLPKEAV 224
            F R+              G + + + +F +M     + N+++WT+LI   A+     EA+
Sbjct: 1590 FLRN--------------GQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAI 1635

Query: 225  YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
              F +M E GI+P+  ++  V+ AC  + +L  G  +  +I       +  +  +LVDMY
Sbjct: 1636 LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMY 1695

Query: 285  MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
             KCG++D AK++F     + L + N ++S Y   G A EALA+   +   G  PD +T  
Sbjct: 1696 AKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFT 1755

Query: 345  SAVSASAQLG 354
            S +SA +  G
Sbjct: 1756 SILSACSHAG 1765



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 1/195 (0%)

Query: 103  LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            L  + +LI G +  G G EAI  + ++   GI P   +   VL ACT   +   G  +HG
Sbjct: 1615 LITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHG 1674

Query: 163  AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             I +  F   V V   L++ Y +CG I + ++VF  MS + +  + ++I A A      E
Sbjct: 1675 FITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVE 1734

Query: 223  AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA-YIDELGMKANALMVNALV 281
            A+ LF  + +EGI+P+S+T   ++SAC+    +  G  + A  + +  M         +V
Sbjct: 1735 ALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVV 1794

Query: 282  DMYMKCGAVDTAKQL 296
             +  +CG +D A +L
Sbjct: 1795 SLLSRCGNLDEALRL 1809



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 18/249 (7%)

Query: 444  LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG- 502
            +  L ++   +E++ L   M  E  ++       +   C Y  AL   + I+A I KNG 
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205

Query: 503  -IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
                +  + T LV  +A+C  P+ A+++F R+  R+V +W A +G     G  E A+  F
Sbjct: 1206 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 1265

Query: 562  NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC------M 615
             EM   G+ PD+ V   VL AC    L+  G         +HG   ++    C      +
Sbjct: 1266 IEMQENGVFPDNFVLPNVLKACGSLQLIGLG-------KGVHGYVLKMGFGACVFVSSSL 1318

Query: 616  VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA-CQKHQNVD-IAAYAAERITELDPE 673
            VD+ G+ G+L +A  +  SM VE N V W S++    Q   N + I  +   R+  ++P 
Sbjct: 1319 VDMYGKCGVLEDARKVFDSM-VEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPT 1377

Query: 674  KSGVHVLLS 682
            +  V   LS
Sbjct: 1378 RVTVASFLS 1386



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 2/118 (1%)

Query: 99   TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            +S  L +YN++I  Y+  G  VEA++L+  L   GI PD  TF  +L+AC+ +    EG+
Sbjct: 1712 SSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGL 1771

Query: 159  QVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
             +   +V K   +  +    C+++    CG++ +  R+   M  + +     SL+ AC
Sbjct: 1772 NLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTAC 1829


>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
          Length = 635

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/562 (40%), Positives = 336/562 (59%), Gaps = 4/562 (0%)

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y     +D    L     D   V   + +  +   GL   ALA+L EML  G  P   T+
Sbjct: 77  YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 136

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            S++ A   L     GR  H Y  +  L G   +   ++ MY + G  + A  +FD M +
Sbjct: 137 SSSLPACHGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPD 193

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
             VV   +++    K G ++ ARE+F  MP +D I WN M+ G TQ     EA+ LFR M
Sbjct: 194 PHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM 253

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGD 522
           L   +  D V ++   SA   LG  +  +W+++Y++ +  +  + ++ TAL+DM+ +CG 
Sbjct: 254 LRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGS 313

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            + A+ VF  +  +D+  W A I   AM G+  +A+E+F+++  QG+ P  I F+G+L A
Sbjct: 314 LEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNA 373

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CSH GLV++G   F+SM + + + P+I HYGCMVDLLGRAGL+ EA  L++SM + P+ V
Sbjct: 374 CSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTV 433

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +W SLLAAC+ H+N+ +    A+ +       SG+++LLSNIYA+ G W  VARVR  MK
Sbjct: 434 MWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMK 493

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
             GI+K PG S+IEV  KV+EF +GD SHP  + I +ML +MN  +++ G+VP    VL 
Sbjct: 494 ASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLH 553

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           D+DE  K+  L+ HSEKLA+AFGLIST+    I++VKNLR C DCH+  KL+SK+  R+I
Sbjct: 554 DLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKI 613

Query: 823 IVRDNNRFHFFRQGSCSCSDFW 844
           + RD NRFH F  GSC+C D+W
Sbjct: 614 VFRDRNRFHHFVDGSCTCGDYW 635



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 189/460 (41%), Gaps = 71/460 (15%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C      GE   +H A V+ G D D  V   L   Y     +     +     +  
Sbjct: 41  LLTGCATLRRTGE---LHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPT 97

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
            V +TS I A + R L   A+ L  EM+  G+ P S T+   + AC     L LG  + A
Sbjct: 98  TVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPAC---HGLALGRALHA 154

Query: 264 YIDELGMKANALMVNALVDMYM-------------------------------KCGAVDT 292
           Y  +L +  ++ +  AL+ MY                                K GA+D 
Sbjct: 155 YAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDD 214

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A++LF     ++ +  N ++  Y + G   EAL +   ML  G  PD V ++ A+SA AQ
Sbjct: 215 ARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQ 274

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
           LG    GR  H YV  +     ++   T +IDMY KCG  E A  +F+ + +K +V WN+
Sbjct: 275 LGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNA 334

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           +I G   +GD   A E+FS++  R    W T                             
Sbjct: 335 MINGYAMHGDSRKALEMFSQL--RSQGLWPT----------------------------- 363

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVF 530
            +T +G+ +AC + G +D     +  +E+   I   ++    +VD+  R G  + A  + 
Sbjct: 364 DITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLV 423

Query: 531 RRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
           + M    D   W + + A  +  N     ++ + ++  G+
Sbjct: 424 QSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGL 463



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 188/442 (42%), Gaps = 56/442 (12%)

Query: 11  VLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV 70
           VL + + +T   QH   T  + +   G L  C TL    + H   ++ G+    +   ++
Sbjct: 17  VLPSSSASTGGQQHGVLTADRVA---GLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRL 73

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
               A     + LT         ++      T+F Y S I  +S  GL + A++L  E+ 
Sbjct: 74  QRAYAASDRLD-LTVT------LLRLTPDPTTVF-YTSAIHAHSSRGLHLAALALLSEML 125

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G++P   T    L AC        G  +H    K+    D +V   L+  Y   GD  
Sbjct: 126 GRGLIPTSHTLSSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDAD 182

Query: 191 DGRRVFDEMSERNVVS-------------------------------WTSLICACARRDL 219
             R +FDEM + +VV                                W ++I    +   
Sbjct: 183 AARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGR 242

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVN 278
           P EA+ LF  M+  G+ P+ V ++  +SA A+L   E G  + +Y+ +   ++ NA +  
Sbjct: 243 PNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGT 302

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           AL+DMY KCG+++ A  +F    D+++V+ N +++ Y   G +R+AL +  ++   G  P
Sbjct: 303 ALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWP 362

Query: 339 DRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
             +T +  ++A +  G +  G      M   Y +   +E +      M+D+  + G  E 
Sbjct: 363 TDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHY----GCMVDLLGRAGLIEE 418

Query: 394 ACRIFDHMS-NKTVVSWNSLIA 414
           A  +   M+     V W SL+A
Sbjct: 419 AFHLVQSMTIAPDTVMWVSLLA 440



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 119/276 (43%), Gaps = 28/276 (10%)

Query: 73  TC-AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
           TC A+MG  +    A++ FD        S     +N++I GY+  G   EA+ L+  +  
Sbjct: 204 TCYAKMGALDD---ARELFD-----GMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLR 255

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIV 190
            G+ PD+      L+A  +      G  +H  +        +  V   LI+ Y +CG + 
Sbjct: 256 SGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLE 315

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           D   VF+ + ++++V W ++I   A     ++A+ +F ++  +G+ P  +T + +++AC+
Sbjct: 316 DAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACS 375

Query: 251 KLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQ-------------- 295
               ++ G +    + +E  +         +VD+  + G ++ A                
Sbjct: 376 HSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMW 435

Query: 296 --LFGECK-DRNLVLCNTIMSNYVRLGLAREALAIL 328
             L   C+  +N+ L   I    V  GLA   + IL
Sbjct: 436 VSLLAACRLHKNMALGQQIADYLVAGGLANSGMYIL 471


>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
 gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
 gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
          Length = 634

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/562 (40%), Positives = 336/562 (59%), Gaps = 4/562 (0%)

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y     +D    L     D   V   + +  +   GL   ALA+L EML  G  P   T+
Sbjct: 76  YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 135

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            S++ A   L     GR  H Y  +  L G   +   ++ MY + G  + A  +FD M +
Sbjct: 136 SSSLPACHGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPD 192

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
             VV   +++    K G ++ ARE+F  MP +D I WN M+ G TQ     EA+ LFR M
Sbjct: 193 PHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM 252

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGD 522
           L   +  D V ++   SA   LG  +  +W+++Y++ +  +  + ++ TAL+DM+ +CG 
Sbjct: 253 LRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGS 312

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            + A+ VF  +  +D+  W A I   AM G+  +A+E+F+++  QG+ P  I F+G+L A
Sbjct: 313 LEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNA 372

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CSH GLV++G   F+SM + + + P+I HYGCMVDLLGRAGL+ EA  L++SM + P+ V
Sbjct: 373 CSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTV 432

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +W SLLAAC+ H+N+ +    A+ +       SG+++LLSNIYA+ G W  VARVR  MK
Sbjct: 433 MWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMK 492

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
             GI+K PG S+IEV  KV+EF +GD SHP  + I +ML +MN  +++ G+VP    VL 
Sbjct: 493 ASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLH 552

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           D+DE  K+  L+ HSEKLA+AFGLIST+    I++VKNLR C DCH+  KL+SK+  R+I
Sbjct: 553 DLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKI 612

Query: 823 IVRDNNRFHFFRQGSCSCSDFW 844
           + RD NRFH F  GSC+C D+W
Sbjct: 613 VFRDRNRFHHFVDGSCTCGDYW 634



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 189/460 (41%), Gaps = 71/460 (15%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C      GE   +H A V+ G D D  V   L   Y     +     +     +  
Sbjct: 40  LLTGCATLRRTGE---LHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPT 96

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
            V +TS I A + R L   A+ L  EM+  G+ P S T+   + AC     L LG  + A
Sbjct: 97  TVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPAC---HGLALGRALHA 153

Query: 264 YIDELGMKANALMVNALVDMYM-------------------------------KCGAVDT 292
           Y  +L +  ++ +  AL+ MY                                K GA+D 
Sbjct: 154 YAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDD 213

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A++LF     ++ +  N ++  Y + G   EAL +   ML  G  PD V ++ A+SA AQ
Sbjct: 214 ARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQ 273

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
           LG    GR  H YV  +     ++   T +IDMY KCG  E A  +F+ + +K +V WN+
Sbjct: 274 LGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNA 333

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           +I G   +GD   A E+FS++  R    W T                             
Sbjct: 334 MINGYAMHGDSRKALEMFSQL--RSQGLWPT----------------------------- 362

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVF 530
            +T +G+ +AC + G +D     +  +E+   I   ++    +VD+  R G  + A  + 
Sbjct: 363 DITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLV 422

Query: 531 RRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
           + M    D   W + + A  +  N     ++ + ++  G+
Sbjct: 423 QSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGL 462



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 188/442 (42%), Gaps = 56/442 (12%)

Query: 11  VLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV 70
           VL + + +T   QH   T  + +   G L  C TL    + H   ++ G+    +   ++
Sbjct: 16  VLPSSSASTGGQQHGVLTADRVA---GLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRL 72

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
               A     + LT         ++      T+F Y S I  +S  GL + A++L  E+ 
Sbjct: 73  QRAYAASDRLD-LTVT------LLRLTPDPTTVF-YTSAIHAHSSRGLHLAALALLSEML 124

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G++P   T    L AC        G  +H    K+    D +V   L+  Y   GD  
Sbjct: 125 GRGLIPTSHTLSSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDAD 181

Query: 191 DGRRVFDEMSERNVVS-------------------------------WTSLICACARRDL 219
             R +FDEM + +VV                                W ++I    +   
Sbjct: 182 AARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGR 241

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVN 278
           P EA+ LF  M+  G+ P+ V ++  +SA A+L   E G  + +Y+ +   ++ NA +  
Sbjct: 242 PNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGT 301

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           AL+DMY KCG+++ A  +F    D+++V+ N +++ Y   G +R+AL +  ++   G  P
Sbjct: 302 ALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWP 361

Query: 339 DRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
             +T +  ++A +  G +  G      M   Y +   +E +      M+D+  + G  E 
Sbjct: 362 TDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHY----GCMVDLLGRAGLIEE 417

Query: 394 ACRIFDHMS-NKTVVSWNSLIA 414
           A  +   M+     V W SL+A
Sbjct: 418 AFHLVQSMTIAPDTVMWVSLLA 439



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 119/276 (43%), Gaps = 28/276 (10%)

Query: 73  TC-AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
           TC A+MG  +    A++ FD        S     +N++I GY+  G   EA+ L+  +  
Sbjct: 203 TCYAKMGALDD---ARELFD-----GMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLR 254

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIV 190
            G+ PD+      L+A  +      G  +H  +        +  V   LI+ Y +CG + 
Sbjct: 255 SGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLE 314

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           D   VF+ + ++++V W ++I   A     ++A+ +F ++  +G+ P  +T + +++AC+
Sbjct: 315 DAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACS 374

Query: 251 KLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQ-------------- 295
               ++ G +    + +E  +         +VD+  + G ++ A                
Sbjct: 375 HSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMW 434

Query: 296 --LFGECK-DRNLVLCNTIMSNYVRLGLAREALAIL 328
             L   C+  +N+ L   I    V  GLA   + IL
Sbjct: 435 VSLLAACRLHKNMALGQQIADYLVAGGLANSGMYIL 470


>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/557 (41%), Positives = 333/557 (59%), Gaps = 48/557 (8%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G++  A+ +F      N  + NT++  Y       EAL +   ML H    +  T    +
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A + +  L   +  H ++++ G        N+++++Y K                    
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSK-------------------- 165

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                      +GD++SAR +F ++  RD                  EA+ LF  M +  
Sbjct: 166 -----------SGDIKSARLLFDQVDQRD-----------------TEALNLFHRMQTAG 197

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           IK+D V +V    AC  LG LD  KWI+AYI+K+ I  D  L   L+DM+A+CGD + A+
Sbjct: 198 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 257

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           +VFR+ME++ VS WTA I   A+ G G +A+E F +M   G++P+ + F G+LTACSH G
Sbjct: 258 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 317

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV++   LF SM  IHG  P I HYGCMVDLLGRAGLL EA +LI++MPV+PN  IWG+L
Sbjct: 318 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 377

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC  H N+++     + + ++DP   G ++ L++I+A+AG+W   ARVR QMKEQG+ 
Sbjct: 378 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 437

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           KLPG S I VNG  HEF +GDESHP++  I  ML ++  RLR+ GY P L ++LLD++++
Sbjct: 438 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDK 497

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+  + HHSEKLA+ FGLIST   M IR+VKNLR+C DCH+  KL+SKVY REI++RD 
Sbjct: 498 EKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDR 557

Query: 828 NRFHFFRQGSCSCSDFW 844
            RFH F+ G+C+C D+W
Sbjct: 558 TRFHLFKDGNCTCGDYW 574



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 211/424 (49%), Gaps = 40/424 (9%)

Query: 11  VLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV 70
           +L TPT    +  + A+T       +  L+ C  + EL+Q H  +LK GL       SK+
Sbjct: 4   ILCTPTSQLSSESNAAQT-------LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKL 56

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           +  CA   +  SL YA+  FD   + N      FM+N++IRGYS      EA+ LY  + 
Sbjct: 57  LAFCASPNS-GSLAYARTVFDRIFRPNT-----FMWNTMIRGYSNSKEPEEALLLYHHML 110

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
              +  + +TFPF+L AC+  SA  E  Q+H  I+KMGF  +++  N L+N Y + GDI 
Sbjct: 111 YHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIK 170

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
             R +FD++ +R+                  EA+ LF  M   GIK ++V +V  + ACA
Sbjct: 171 SARLLFDQVDQRDT-----------------EALNLFHRMQTAGIKLDNVALVSTLQACA 213

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            L  L+ G  + AYI +  ++ + ++   L+DMY KCG ++ A ++F + +++ + +   
Sbjct: 214 DLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTA 273

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG-----DLLCGRMCHGY 365
           ++S Y   G  REAL    +M   G  P+++T    ++A +  G      LL   M   +
Sbjct: 274 MISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIH 333

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVES 424
             +  +E +      M+D+  + G  + A  + ++M  K   + W +L+     +G++E 
Sbjct: 334 GFKPSIEHY----GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLEL 389

Query: 425 AREV 428
            +++
Sbjct: 390 GKQI 393



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 186/416 (44%), Gaps = 52/416 (12%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE--CGDIVDGRRVFDEMSE 201
            L+   + S   E  Q+HG ++K G   D    + L+ F      G +   R VFD +  
Sbjct: 21  TLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            N   W ++I   +    P+EA+ L+  M+   +  N+ T   ++ AC+ +  LE   ++
Sbjct: 81  PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQI 140

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A+I ++G  +     N+L+++Y K G + +A+ LF +   R+                 
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRD----------------- 183

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EAL +   M   G + D V ++S + A A LG L  G+  H Y+ ++ +E    +   +
Sbjct: 184 TEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVL 243

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           IDMY KCG  E A  +F  M  K V  W ++I+G   +G             GR      
Sbjct: 244 IDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGR------------GR------ 285

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK- 500
                        EA+E F  M +  ++ +++T  G+ +AC + G +  AK ++  +E+ 
Sbjct: 286 -------------EALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI 332

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +G    ++    +VD+  R G  + A ++   M  K + + W A + A  + GN E
Sbjct: 333 HGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLE 388



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 35/242 (14%)

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR-----AMQVFRRMEKRDVSAWTAAIG 546
           + I+  + K G+  D   A+ L+   A C  P       A  VF R+ + +   W   I 
Sbjct: 35  RQIHGQMLKTGLILDEIPASKLL---AFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIR 91

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGW-- 593
             +     E+A+ L++ ML   +  ++  F  +L ACS           H  ++  G+  
Sbjct: 92  GYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGS 151

Query: 594 --HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLL 648
             +   S+ +++  S  I     + D + +     EAL+L   M    ++ ++V   S L
Sbjct: 152 EIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT--EALNLFHRMQTAGIKLDNVALVSTL 209

Query: 649 AACQKHQNVD----IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            AC     +D    I AY  +   E+DP    V   L ++YA  G       V  +M+E+
Sbjct: 210 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCV---LIDMYAKCGDLEEAIEVFRKMEEK 266

Query: 705 GI 706
           G+
Sbjct: 267 GV 268


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 260/759 (34%), Positives = 393/759 (51%), Gaps = 41/759 (5%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           ++ D   +  +  YN+LIR YS  G  +               P+ +TFPFVL AC+   
Sbjct: 84  HLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALL 143

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
                  VH    + G   D+FV   L++ Y +C        VF  M  R+VV+W +++ 
Sbjct: 144 DLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLA 203

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL---- 268
             A      + +     M ++   PN+ T+V ++   A+   L  G  V AY        
Sbjct: 204 GYALHGKYSDTIACLLLM-QDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLH 262

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
             K   L+  AL+DMY KCG +  A ++F     RN V  + ++  +V  G   EA ++ 
Sbjct: 263 DHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLF 322

Query: 329 DEMLLHGP---RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
            +ML  G     P  V   SA+ A A L DL  G+  H  + ++GL    +  N+++ MY
Sbjct: 323 KDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMY 380

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            K                          AGLI     + A  +F +M  +D +S++ ++ 
Sbjct: 381 AK--------------------------AGLI-----DQATTLFDQMVVKDTVSYSALVS 409

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
           G  Q    +EA  +FR M +  ++ D  TMV +  AC +L AL   K  +  +   GI  
Sbjct: 410 GYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIAS 469

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           +  +  AL+DM+A+CG    + Q+F  M  RD+ +W   I    + G G++A  LF +M 
Sbjct: 470 ETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMK 529

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
            Q  +PD + F+ +++ACSH GLV +G   F  M   +G++P++ HY  MVDLL R G L
Sbjct: 530 HQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFL 589

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
            EA   I+ MP++ +  +WG+LL AC+ H+N+D+    +  I +L PE +G  VLLSNI+
Sbjct: 590 DEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIF 649

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
           ++AG++   A VR+  KEQG +K PG S IE+NG +H F  GD SH + + I   L  + 
Sbjct: 650 SAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNIL 709

Query: 746 CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
             +   GY  D + VL DV+E+EK+  L +HSEKLA+AFG+++ S+   I V KNLR+C 
Sbjct: 710 VDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCG 769

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCH+  K ++ V  R IIVRD NRFH F+ G CSC DFW
Sbjct: 770 DCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 163/552 (29%), Positives = 255/552 (46%), Gaps = 71/552 (12%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISK----VVCTCAQMGTFESLTYAQKAFD 91
           LK C  L +L+     HCH  + GL H   ++S     V   CA      S  +A   F 
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGL-HADLFVSTALVDVYAKCA------SFRHAATVFR 188

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
                   +  +  +N+++ GY+  G   + I+  + L      P+  T   +L    + 
Sbjct: 189 -----RMPARDVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQH 242

Query: 152 SAFGEGVQVHGAIVKMGFDRD----VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
            A  +G  VH   V+     D    V V   L++ Y +CG +V   RVF+ M+ RN V+W
Sbjct: 243 GALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTW 302

Query: 208 TSLI---CACARRDLPKEAVYLFFEMVEEGI---KPNSVTMVCVISACAKLQNLELGDRV 261
           ++L+     C R     EA  LF +M+ +G+    P SV     + ACA L +L LG ++
Sbjct: 303 SALVGGFVLCGRM---LEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQL 357

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A + + G+  +    N+L+ MY K G +D A  LF +   ++ V  + ++S YV+ G A
Sbjct: 358 HALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKA 417

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EA  +  +M     +PD  TM+S + A + L  L  G+  HG V+  G+    SICN +
Sbjct: 418 DEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNAL 477

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           IDMY KCG+ +++ +IFD M  + +VSWN++IAG   +G                     
Sbjct: 478 IDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHG--------------------- 516

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEK 500
             LG        +EA  LF  M  +  + D VT + + SAC + G +   K W +    K
Sbjct: 517 --LG--------KEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHK 566

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQ 556
            GI   M+    +VD+ AR G    A Q  + M  K DV  W A +GA  +  N   G+Q
Sbjct: 567 YGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQ 626

Query: 557 AVELFNEMLRQG 568
              +  ++  +G
Sbjct: 627 VSSMIQQLGPEG 638



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 157/387 (40%), Gaps = 51/387 (13%)

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           M CG +  A+ LF +     +   N ++  Y   G A              P+P+  T  
Sbjct: 74  MICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFP 133

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
             + A + L DL   R  H +  R GL     +   ++D+Y KC         F H    
Sbjct: 134 FVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCAS-------FRH---- 182

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                               A  VF  MP RD ++WN ML G      + + +    +M 
Sbjct: 183 --------------------AATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQ 222

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYI--------EKNGIHCDMQLATALVDM 516
            +    +  T+V +       GAL   + ++AY          K+G+     + TAL+DM
Sbjct: 223 DDHAP-NASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGV----LVGTALLDM 277

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG---IKPDS 573
           +A+CG    A +VF  M  R+   W+A +G   + G   +A  LF +ML QG   + P S
Sbjct: 278 YAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTS 337

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           +     L AC++   +  G  L  ++    G+   +     ++ +  +AGL+ +A  L  
Sbjct: 338 V--ASALRACANLSDLCLGKQL-HALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFD 394

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIA 660
            M V+ + V + +L++   ++   D A
Sbjct: 395 QMVVK-DTVSYSALVSGYVQNGKADEA 420


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 272/845 (32%), Positives = 433/845 (51%), Gaps = 73/845 (8%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGL--GHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           P+  S    ++L  ++  H   L++ L  G  P+  + ++   A+ G    LT A   F+
Sbjct: 64  PAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCG---DLTAALALFN 120

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK- 150
                +  +     +NSLI         + A+    ++   G     FT   VL AC+  
Sbjct: 121 AMPSRDAVT-----FNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHL 175

Query: 151 SSAFGEGVQVHGAIVKMGF-DRD-VFVENCLINFYGECGDIVDGRRVFDEMSERN----- 203
           +     G + H   +K GF D D  F  N L++ Y   G + D + +F  +   +     
Sbjct: 176 AEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGG 235

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VV+W +++    +     EA+ + ++MV  G++P+ +T    + AC++L+ L LG  + A
Sbjct: 236 VVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHA 295

Query: 264 YI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK--DRNLVLCNTIMSNYVRLGL 320
           Y+  +  + AN+ + +ALVDMY     V  A+++F       R L L N ++  Y + G+
Sbjct: 296 YVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGM 355

Query: 321 AREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
             EAL +   M    G  P   T+   + A A+          HGYVL+ G+     + N
Sbjct: 356 DEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQN 415

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++D+Y + G                               D+E+AR +F+ +  RD +S
Sbjct: 416 ALMDLYARLG-------------------------------DMEAARWIFAAIEPRDVVS 444

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLS------------------ERIKVDRVTMVGVASA 481
           WNT++ G   +    +A +L R M                    E +  + VT++ +   
Sbjct: 445 WNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPG 504

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  L A    K I+ Y  ++ +  D+ + +ALVDM+A+CG    +  VF R+ KR+V  W
Sbjct: 505 CAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITW 564

Query: 542 TAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
              I A  M G G++A+ LF+ M +    KP+ + F+  L ACSH G+V++G  LF SM 
Sbjct: 565 NVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMK 624

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM-PVEPNDVIWGSLLAACQKHQNVDI 659
             HGV P    + C VD+LGRAG L EA  +I SM P E     W S L AC+ H+NV +
Sbjct: 625 RNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPL 684

Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
              AAER+ +L+P+++  +VLL NIY++AG W   + VR +M+++G+ K PG S IE++G
Sbjct: 685 GEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDG 744

Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEK 779
            +H F +G+ +HPE   + + +  +  R+R+ GY PD ++VL D++E EK  +L +HSEK
Sbjct: 745 VIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEK 804

Query: 780 LAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCS 839
           LA+AFGL+ T     IRV KNLR+C DCH  AK +S++  REI++RD  RFH F  G+CS
Sbjct: 805 LAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACS 864

Query: 840 CSDFW 844
           C D+W
Sbjct: 865 CGDYW 869



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 244/556 (43%), Gaps = 77/556 (13%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF------VENCLINFYGECGDIV 190
           D F  P    +     +      +HGA ++    RD+       V N L+  Y  CGD+ 
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALR----RDLLHGFTPAVANALLTAYARCGDLT 113

Query: 191 DGRRVFDEMSERNVVSWTSLICACA--RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
               +F+ M  R+ V++ SLI A    RR LP  A+    +M+ EG   +S T+V V+ A
Sbjct: 114 AALALFNAMPSRDAVTFNSLIAALCLFRRWLP--ALDALRDMLLEGHPLSSFTLVSVLLA 171

Query: 249 CAKL-QNLELGDRVCAYIDELGM--KANALMVNALVDMYMKCGAVDTAKQLFGECKDRN- 304
           C+ L ++L LG    A+  + G          NAL+ MY + G VD A+ LFG     + 
Sbjct: 172 CSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDS 231

Query: 305 ----LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
               +V  NT++S  V+ G   EA+ ++ +M+  G RPD +T  SA+ A +QL  L  GR
Sbjct: 232 PGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGR 291

Query: 361 MCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
             H YVL++  L     + + ++DMY    +                             
Sbjct: 292 EMHAYVLKDSDLAANSFVASALVDMYASHER----------------------------- 322

Query: 420 GDVESAREVFSEMPG--RDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMV 476
             V  AR VF  +PG  R    WN M+ G  Q  M EEA+ELF  M +E  +     T+ 
Sbjct: 323 --VGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIA 380

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
           GV  AC         + ++ Y+ K G+  +  +  AL+D++AR GD + A  +F  +E R
Sbjct: 381 GVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPR 440

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG------------------IKPDSIVFVG 578
           DV +W   I    ++G+   A +L  EM +QG                  + P+++  + 
Sbjct: 441 DVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMT 500

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L  C+      +G  +       H +   I     +VD+  + G L  +  +   +P +
Sbjct: 501 LLPGCAMLAAPAKGKEI-HGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-K 558

Query: 639 PNDVIWGSLLAACQKH 654
            N + W  L+ A   H
Sbjct: 559 RNVITWNVLIMAYGMH 574


>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
 gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/444 (46%), Positives = 293/444 (65%)

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  K++VS  ++I    K G ++ AR +F  +  RD I WN M+ G  Q  +  E + LF
Sbjct: 1   MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
           R ML+ +++ + VT++ V SACG  GAL+  +W+++YIE NGI  ++++ T+L+DM+++C
Sbjct: 61  RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           G  + A  VF R+  +DV AW + +   AM G  + A+ LF EM   G +P  I F+GVL
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
            ACSH GLV++GW  F SM D +G+ P++ HYGCMV+LLGRAG L EA +L+K+M ++ +
Sbjct: 181 NACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQD 240

Query: 641 DVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQ 700
            V+WG+LL AC+ H N+ +    AE +   +   SG +VLLSNIYA+AG W  VARVR  
Sbjct: 241 PVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTL 300

Query: 701 MKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNV 760
           MKE G  K PG SSIEVN KVHEF +GD  HP+   I  ML E+N  L+  GY P    V
Sbjct: 301 MKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIV 360

Query: 761 LLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDR 820
           L D+++ +K+  L  HSEKLA+AFGLI+T     I++VKNLR+C DCH+  KL+SK+  R
Sbjct: 361 LHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGR 420

Query: 821 EIIVRDNNRFHFFRQGSCSCSDFW 844
           ++++RD NRFH F  G CSC D+W
Sbjct: 421 KVVMRDRNRFHHFVNGLCSCGDYW 444



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 36/288 (12%)

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           + A++  Y K G +D A+ LF   ++R+ +  N ++  Y + GL  E L +  +ML    
Sbjct: 9   LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           RP+ VT+L+ +SA  Q G L  GR  H Y+  NG+     +  ++IDMY KCG  E A  
Sbjct: 69  RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F+ +SNK VV+WNS++ G   +G  + A  +F EM          M+G           
Sbjct: 129 VFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEM---------CMIG----------- 168

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVD 515
                       +   +T +GV +AC + G +    K+ Y+  ++ GI   ++    +V+
Sbjct: 169 -----------YQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVN 217

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE 559
           +  R G  + A ++ + ME  +D   W   +GA  + GN   GEQ  E
Sbjct: 218 LLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAE 265



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 134/252 (53%), Gaps = 2/252 (0%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           +I  Y + G I + R +FD + ER+ + W  +I   A+  LP E + LF +M+   ++PN
Sbjct: 12  MITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPN 71

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            VT++ V+SAC +   LE G  V +YI+  G+  N  +  +L+DMY KCG+++ A+ +F 
Sbjct: 72  EVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFE 131

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
              ++++V  N+++  Y   G +++AL +  EM + G +P  +T +  ++A +  G +  
Sbjct: 132 RISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSE 191

Query: 359 G-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGL 416
           G +  +      G+E        M+++  + G  E A  +  +M  ++  V W +L+   
Sbjct: 192 GWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGAC 251

Query: 417 IKNGDVESAREV 428
             +G++    ++
Sbjct: 252 RLHGNIALGEQI 263



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 2/209 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N +I GY+  GL  E + L+ ++    + P++ T   VL+AC ++ A   G  VH  I 
Sbjct: 40  WNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIE 99

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             G   +V V   LI+ Y +CG + D R VF+ +S ++VV+W S++   A     ++A+ 
Sbjct: 100 NNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALR 159

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMY 284
           LF EM   G +P  +T + V++AC+    +  G +    + DE G++        +V++ 
Sbjct: 160 LFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLL 219

Query: 285 MKCGAVDTAKQLFGECK-DRNLVLCNTIM 312
            + G ++ A +L    + D++ VL  T++
Sbjct: 220 GRAGYLEEAYELVKNMEIDQDPVLWGTLL 248


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/705 (36%), Positives = 371/705 (52%), Gaps = 34/705 (4%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
            +L     +S+   G  VH  IVK +      F+ N LIN Y +       R V      
Sbjct: 11  LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           RNVVSWTSLI   A+      A+  FFEM  EG+ PN  T  C   A A L+    G ++
Sbjct: 71  RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A   + G   +  +  +  DMY K    D A++LF E  +RNL   N  +SN V  G  
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
           REA+    E       P+ +T  + ++A +    L  G   HG VLR+G +   S+CN +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           ID Y KC +                               + S+  +F+EM  ++ +SW 
Sbjct: 251 IDFYGKCKQ-------------------------------IRSSEIIFTEMGTKNAVSWC 279

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           +++    Q +  E+A  L+     + ++     +  V SAC  +  L+L + I+A+  K 
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +   + + +ALVDM+ +CG  + + Q F  M ++++    + IG  A +G  + A+ LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399

Query: 562 NEMLRQGI--KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            EM  +G    P+ + FV +L+ACS  G V  G  +F SM   +G+ P   HY C+VD+L
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG++  A + IK MP++P   +WG+L  AC+ H    +   AAE + +LDP+ SG HV
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN +A+AG+W     VR ++K  GI+K  G S I V  +VH F + D SH     I +
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L ++   +  AGY PDL   L D++E+EK   +SHHSEKLA+AFGL+S   ++PIR+ K
Sbjct: 580 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITK 639

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCHSF K VS    REIIVRDNNRFH F+ G CSC D+W
Sbjct: 640 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 204/457 (44%), Gaps = 41/457 (8%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + SLI G +  G    A+  + E+   G++P+ FTFP    A         G Q+H   V
Sbjct: 76  WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K G   DVFV     + Y +     D R++FDE+ ERN+ +W + I        P+EA+ 
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F E       PNS+T    ++AC+   +L LG ++   +   G   +  + N L+D Y 
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT--- 342
           KC  + +++ +F E   +N V   ++++ YV+     +A      +L    R D V    
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA-----SVLYLRSRKDIVETSD 310

Query: 343 -MLSAV-SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            M+S+V SA A +  L  GR  H + ++  +E    + + ++DMY KCG  E + + FD 
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  K +V+ NSLI G    G V+ A  +F EM  R          G T   M        
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG--------CGPTPNYM-------- 414

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
                        T V + SAC   GA++    I+  +    GI    +  + +VDM  R
Sbjct: 415 -------------TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
            G  +RA +  ++M  +  +S W A   A  M G  +
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 188/383 (49%), Gaps = 49/383 (12%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+K FD   + N  +   F+ NS+  G        EAI  ++E       P+  TF   L
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRP-----REAIEAFIEFRRIDGHPNSITFCAFL 216

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           NAC+       G+Q+HG +++ GFD DV V N LI+FYG+C  I     +F EM  +N V
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 276

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW SL+ A  +    ++A  L+    ++ ++ +   +  V+SACA +  LELG  + A+ 
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 336

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            +  ++    + +ALVDMY KCG ++ ++Q F E  ++NLV  N+++  Y   G    AL
Sbjct: 337 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL 396

Query: 326 AILDEMLLH--GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           A+ +EM     GP P+ +T +S +SA ++ G            + NG++ +DS+ +T   
Sbjct: 397 ALFEEMAPRGCGPTPNYMTFVSLLSACSRAG-----------AVENGMKIFDSMRST--- 442

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS-WNT 442
             ++ G +  +C                ++  L + G VE A E   +MP +  IS W  
Sbjct: 443 YGIEPGAEHYSC----------------IVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486

Query: 443 M-----------LGGLTQENMFE 454
           +           LG L  EN+F+
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFK 509


>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/691 (35%), Positives = 375/691 (54%), Gaps = 96/691 (13%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  +++ G   D F  + LI          +   ++VFD++   N+ +W +LI A A 
Sbjct: 53  QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112

Query: 217 RDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              P +++ +F  M+ +    P+  T   +I A ++L+ L  G      + ++ + ++  
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVF 172

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           ++N+L+  Y KCG +    ++F     R++V  N++++ +V+ G   EAL +  EM    
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM---- 228

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
                                           +N L    ++ N M+DMY KCG  E A 
Sbjct: 229 ------------------------------ETQNSL----TLSNAMLDMYTKCGSVEDAK 254

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           R+FD M  K +VSW +++ G  K G+ ++A+ +F  MP +D  +WN ++    Q    +E
Sbjct: 255 RLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKE 314

Query: 456 AMELFR-VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           A+ELF  + LS+  K D VT+                        K G+  +  L T+L+
Sbjct: 315 ALELFHELQLSKTAKPDEVTL------------------------KQGMKLNCHLTTSLI 350

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+ +CGD Q+A+ VF  +E++DV  W+A I  +AM G+G+ A+ LF++M    +KP+++
Sbjct: 351 DMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAV 410

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F  +L ACSH GLV +G   F  M  ++G                              
Sbjct: 411 TFTNILCACSHVGLVEEGRTFFNQMELVYG-----------------------------K 441

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+ P   +WG+LL AC  H+NV +A  A  ++ EL+P   G +VLLSNIYA AGKW  V
Sbjct: 442 MPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRV 501

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           + +R  M++ G++K PG SSIEV+G VHEF  GD SHP    I + L E+  RL   GYV
Sbjct: 502 SGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYV 561

Query: 755 PDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           P+ +++L  V+E++ K+  L  HSEKLA+AFGLIST ++ PIR+VKNLR+C DCHS AKL
Sbjct: 562 PNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKL 621

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VSK+YDREI++RD  RFH FR+G CSC D+W
Sbjct: 622 VSKLYDREILLRDRYRFHHFREGHCSCMDYW 652



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 233/502 (46%), Gaps = 74/502 (14%)

Query: 7   PSPLVLATPTVTTLTNQHKAKTTPKDS------PSIGSLKNCKTLNELKQPHCHILKQGL 60
           P+P +++ P   +L   +    T  +       P++  +  C    +LKQ H  +L+ GL
Sbjct: 4   PNPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGL 63

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
              P   S+++ T A +  F SL YAQ+ FD     N     L+ +N+LIR Y+      
Sbjct: 64  FFDPFSASRLI-TAAALSPFPSLDYAQQVFDQIPHPN-----LYTWNTLIRAYASSSNPH 117

Query: 121 EAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
           +++ +++  L      PDKFTFPF++ A ++      G   HG ++K+    DVF+ N L
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           I+FY +CG++  G RVF  +  R+VVSW S+I A  +   P+EA+ LF EM  +    NS
Sbjct: 178 IHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ----NS 233

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           +T                                  + NA++DMY KCG+V+ AK+LF +
Sbjct: 234 LT----------------------------------LSNAMLDMYTKCGSVEDAKRLFDK 259

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG----- 354
             ++++V   T++  Y ++G    A  I D M    P  D     + +SA  Q G     
Sbjct: 260 MPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAM----PNQDIAAWNALISAYEQCGKPKEA 315

Query: 355 -----DLLCGRMCHG--YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
                +L   +        L+ G++    +  ++IDMY KCG  + A  +F  +  K V 
Sbjct: 316 LELFHELQLSKTAKPDEVTLKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVF 375

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMP----GRDHISWNTMLGGLTQENMFEEAMELFRVM 463
            W+++IAGL  +G  + A  +FS+M       + +++  +L   +   + EE    F  M
Sbjct: 376 VWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQM 435

Query: 464 LSERIKVDRVTMVGVASACGYL 485
               +   ++ M   AS  G L
Sbjct: 436 ---ELVYGKMPMAPAASVWGAL 454


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/746 (33%), Positives = 418/746 (56%), Gaps = 40/746 (5%)

Query: 107  NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG----VQVHG 162
            N L+ G +    G EA  ++ E+    +  +  +   +L+  T+ S   EG     +VH 
Sbjct: 421  NGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHA 479

Query: 163  AIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             + + G  D  + + N L+N YG+C  I +   VF  M  ++ VSW S+I      +  +
Sbjct: 480  YLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFE 539

Query: 222  EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            EAV  F  M   G+ P++ +++  +S+C+ L  L LG ++     + G+  +  + NAL+
Sbjct: 540  EAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALL 599

Query: 282  DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA-REALAILDEMLLHGPRPDR 340
             +Y +  +++  +++F +  + + V  N+ +    +   +  +AL    EM+  G RP+R
Sbjct: 600  TLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNR 659

Query: 341  VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            VT ++ ++A +    L  G   H  +L+  +   ++I N ++  Y KC + E    IF  
Sbjct: 660  VTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSR 719

Query: 401  MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
            MS +                              RD +SWN+M+ G     +  +AM+L 
Sbjct: 720  MSER------------------------------RDEVSWNSMISGYLHSGILHKAMDLV 749

Query: 461  RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
              M+    K+D  T   V SAC  +  L+    ++A   +  +  D+ + +ALVDM+A+C
Sbjct: 750  WPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKC 809

Query: 521  GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
            G    A + F  M  R++ +W + I   A  G+G++A+++F  M + G  PD + FVGVL
Sbjct: 810  GKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVL 869

Query: 581  TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
            +ACSH GLV++G+  F+SM +++G+SP+I H+ CMVDLLGRAG + +  D IK+MP++PN
Sbjct: 870  SACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPN 929

Query: 641  DVIWGSLLAACQKH--QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
             +IW ++L AC +   +N ++   AA+ + EL+P+ +  +VLLSN++A+ G W +V   R
Sbjct: 930  ILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEAR 989

Query: 699  LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
            L M++  ++K  G S + +   VH F +GD++HPE   I   L+E+  ++RDAGYVP+  
Sbjct: 990  LAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETK 1049

Query: 759  NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
              L D++ + K+ LLS+HSEKLA+AF L   S+ +PIR++KNLR+C DCH+  K +SK+ 
Sbjct: 1050 YALYDLELENKEELLSYHSEKLAIAFVLTRKSE-LPIRIMKNLRVCGDCHTAFKYISKIV 1108

Query: 819  DREIIVRDNNRFHFFRQGSCSCSDFW 844
             R+II+RD+NRFH F  G CSC D+W
Sbjct: 1109 GRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 173/650 (26%), Positives = 299/650 (46%), Gaps = 58/650 (8%)

Query: 40  KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           K   +L +    H  + K G      + + ++    ++G   +L  A+K FD   + N  
Sbjct: 151 KTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIG---NLVSARKLFDEMPQKN-- 205

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK--SSAFGEG 157
              L  ++ LI GY+   +  EA SL+  +   G+LP+ F     L AC +  S+    G
Sbjct: 206 ---LVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLG 262

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGEC-GDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           +Q+H  I K+    D+ + N L++ Y +C G I D  RVFDE+  RN V+W S+I    R
Sbjct: 263 MQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCR 322

Query: 217 RDLPKEAVYLFFEMVEEGI----KPNSVTMVCVISACAKLQN--LELGDRVCAYIDELGM 270
           R     A  LF  M  EG+    +PN  T+  +++A   L +  L L +++   I++ G 
Sbjct: 323 RGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGF 382

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             +  + +ALV+ + + G +D AK +F +  DRN V  N +M    R     EA  +  E
Sbjct: 383 LRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKE 442

Query: 331 M--LLHGPRPDRVTMLSAVSASAQLGD-LLCGRMCHGYVLRNGL-EGWDSICNTMIDMYM 386
           M  L+       V +LS  +  + L +    G+  H Y+ R+GL +   SI N +++MY 
Sbjct: 443 MKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYG 502

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KC   + AC                                VF  MP +D +SWN+M+ G
Sbjct: 503 KCTAIDNAC-------------------------------SVFQLMPSKDTVSWNSMISG 531

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
           L     FEEA+  F  M    +     +++   S+C  LG L L + I+    K G+  D
Sbjct: 532 LDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLD 591

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA-MEGNGEQAVELFNEML 565
           + ++ AL+ ++A         +VF +M + D  +W + IGA+A  E +  QA++ F EM+
Sbjct: 592 VSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMM 651

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
           + G +P+ + F+ +L A S   ++  G H   ++   + V+        ++   G+   +
Sbjct: 652 QAGWRPNRVTFINILAAVSSFSVLGLG-HQIHALILKYSVADDNAIENALLAFYGKCEQM 710

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQK----HQNVDIAAYAAERITELD 671
            +   +   M    ++V W S+++        H+ +D+     +R  +LD
Sbjct: 711 EDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLD 760



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 169/344 (49%), Gaps = 13/344 (3%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVC 72
            V+      +    P +   I +L +C +L  L   +Q H    K GL    S  + ++ 
Sbjct: 541 AVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLT 600

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV-EAISLYVELAG 131
             A+    +S+   QK F    + ++ S     +NS I   +     V +A+  ++E+  
Sbjct: 601 LYAET---DSINECQKVFFQMPEYDQVS-----WNSFIGALAKYEASVLQALKYFLEMMQ 652

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G  P++ TF  +L A +  S  G G Q+H  I+K     D  +EN L+ FYG+C  + D
Sbjct: 653 AGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMED 712

Query: 192 GRRVFDEMSER-NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
              +F  MSER + VSW S+I       +  +A+ L + M++ G K +  T   V+SACA
Sbjct: 713 CEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACA 772

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            +  LE G  V A      ++++ ++ +ALVDMY KCG +D A + F     RN+   N+
Sbjct: 773 SVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNS 832

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           ++S Y R G  ++AL I   M  HG  PD VT +  +SA + +G
Sbjct: 833 MISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVG 876



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 2/209 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS+I GY   G+  +A+ L   +   G   D FTF  VL+AC   +    G++VH   V
Sbjct: 729 WNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAV 788

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +   + DV V + L++ Y +CG I    R F+ M  RN+ SW S+I   AR    ++A+ 
Sbjct: 789 RACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALK 848

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMVNALVDMY 284
           +F  M + G  P+ VT V V+SAC+ +  ++ G +    + E+ G+       + +VD+ 
Sbjct: 849 IFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLL 908

Query: 285 MKCGAVDTAKQLFGECK-DRNLVLCNTIM 312
            + G V   +        D N+++  T++
Sbjct: 909 GRAGDVKKIEDFIKTMPMDPNILIWRTVL 937



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           + YA + F+     N     ++ +NS+I GY+  G G +A+ ++  +   G  PD  TF 
Sbjct: 812 IDYASRFFELMPVRN-----IYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFV 866

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMS- 200
            VL+AC+      EG +   ++ ++ G    +   +C+++  G  GD+         M  
Sbjct: 867 GVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPM 926

Query: 201 ERNVVSWTSLICACAR 216
           + N++ W +++ AC R
Sbjct: 927 DPNILIWRTVLGACCR 942


>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
 gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/485 (44%), Positives = 318/485 (65%), Gaps = 8/485 (1%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKC--GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
           H   ++ G+     + N ++  Y KC  G   +AC++FD M +K  V+ +++I       
Sbjct: 1   HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYF--- 57

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
             ESA +VF  MP +D ++WN+++ G        EA+ L++ M SE ++ D  TMV + S
Sbjct: 58  --ESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLS 115

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVS 539
           AC  L  L L +  + Y+ K G++ ++    AL+D++A+CG    A ++F  M  +R+V 
Sbjct: 116 ACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVV 175

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
           +WT+ I  +A+ G G++A+E F +M R+G+ P  I FVGVL ACSH G+VN+G+  F+ M
Sbjct: 176 SWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRM 235

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
            + + + P+I HYGCMVDLLGRAGLL EA D I+ MP++PN VIW +LL AC  H ++ +
Sbjct: 236 KEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGL 295

Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
            A+A  R+ +L+P+ SG +VLLSN+YAS  +W++V  VR  M  +G+RK PG S +E+  
Sbjct: 296 GAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGN 355

Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEK 779
            VHEF  GD +HP+   I  ML EM  +L+ AGYVP   NVL D++E+EK+  L +HSEK
Sbjct: 356 HVHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEK 415

Query: 780 LAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCS 839
           +A+AF LI+T    PIR++KNLR+C DCH   KL+SKV++R+I+VRD +RFH FR GSCS
Sbjct: 416 IAIAFMLINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCS 475

Query: 840 CSDFW 844
           C D+W
Sbjct: 476 CRDYW 480



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 99/173 (57%), Gaps = 1/173 (0%)

Query: 79  TFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK 138
           T +++  A     Y + +      +  +NS+I G++  G   EA++LY  +   G+ PD 
Sbjct: 48  TLDTMITAYFESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDG 107

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           FT   +L+AC + +    G + H  +VK+G ++++   N L++ Y +CG I + R++FDE
Sbjct: 108 FTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDE 167

Query: 199 MS-ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           M  ERNVVSWTSLI   A     KEA+  F +M  EG+ P+ +T V V+ AC+
Sbjct: 168 MGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACS 220



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 146/309 (47%), Gaps = 19/309 (6%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           +D    + +I  Y E        +VF+ M E+++V+W S+I   A    P EA+ L+  M
Sbjct: 44  KDTVTLDTMITAYFE-----SAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRM 98

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
             EG++P+  TMV ++SACA+L  L LG R   Y+ ++G+  N    NAL+D+Y KCG +
Sbjct: 99  GSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTI 158

Query: 291 DTAKQLFGECK-DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
             A+++F E   +RN+V   +++      G  +EAL    +M   G  P  +T +  + A
Sbjct: 159 SEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYA 218

Query: 350 SAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCG-KQEMACRIFDHMSN 403
            +  G +  G     RM   Y +   +E +      M+D+  + G  +E    I D    
Sbjct: 219 CSHCGIVNEGFEYFKRMKEQYDIVPRIEHY----GCMVDLLGRAGLLKEAYDYIQDMPLQ 274

Query: 404 KTVVSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
              V W +L+     +G +     AR    ++  +D   +  +      E  + +  E+ 
Sbjct: 275 PNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVR 334

Query: 461 RVMLSERIK 469
           R MLSE ++
Sbjct: 335 RTMLSEGVR 343



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 141/317 (44%), Gaps = 16/317 (5%)

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
           C   DE+  K + + ++ ++  Y      ++A ++F    ++++V  N++++ +   G  
Sbjct: 35  CKLFDEMPHK-DTVTLDTMITAYF-----ESAYKVFELMPEKDIVAWNSVINGFALNGKP 88

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EAL +   M   G  PD  TM+S +SA A+L  L+ GR  H Y+++ GL       N +
Sbjct: 89  NEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHANNAL 148

Query: 382 IDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----D 436
           +D+Y KCG    A +IFD M   + VVSW SLI GL  NG  + A E F +M        
Sbjct: 149 LDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPS 208

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            I++  +L   +   +  E  E F+ M  +   V R+   G       LG   L K  Y 
Sbjct: 209 EITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYG--CMVDLLGRAGLLKEAYD 266

Query: 497 YIEKNGIHCDMQLATALV---DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           YI+   +  +  +   L+    +    G    A     ++E +D   +       A E  
Sbjct: 267 YIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLSNLYASEQR 326

Query: 554 GEQAVELFNEMLRQGIK 570
                E+   ML +G++
Sbjct: 327 WSDVHEVRRTMLSEGVR 343



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)

Query: 30  PKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P     +  L  C  L  L   ++ H +++K GL       + ++   A+ GT   ++ A
Sbjct: 105 PDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGT---ISEA 161

Query: 87  QKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           +K FD   I+ N  S T     SLI G +  G G EA+  + ++   G++P + TF  VL
Sbjct: 162 RKIFDEMGIERNVVSWT-----SLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVL 216

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ER 202
            AC+      EG +    + K  +D    +E+  C+++  G  G + +      +M  + 
Sbjct: 217 YACSHCGIVNEGFEYFKRM-KEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQP 275

Query: 203 NVVSWTSLICAC 214
           N V W +L+ AC
Sbjct: 276 NAVIWRTLLGAC 287


>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
 gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/599 (39%), Positives = 350/599 (58%), Gaps = 10/599 (1%)

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV--DTAKQLFGECKDRNLVLCNTI 311
           NL    ++  ++   G+  +  ++  L+    K G      A+++    + RN  L   +
Sbjct: 61  NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +  Y   G   EA+A+   M      P   T  + + A   + DL  GR  H    R  L
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR--L 178

Query: 372 EGW--DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            G+    + NTMIDMY+KC   + A ++FD M  + V+SW  LIA   + G++E A E+F
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
             +P +D ++W  M+ G  Q    +EA+E F  M    I+ D VT+ G  SAC  LGA  
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298

Query: 490 LAKWIYAYIEKNGIHCD--MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            A       +K+G      + + +AL+DM+++CG+ + A+ VF  M  ++V  +++ I  
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358

Query: 548 MAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
           +A  G  ++A+ LF+ M+ Q  IKP+++ FVG L ACSH GLV+QG  +F SM    GV 
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           P   HY CMVDLLGR G L EAL+LIK+M VEP+  +WG+LL AC+ H N +IA  AAE 
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS-SIEVNGKVHEFT 725
           + EL+P+  G ++LLSN+YASAG W  V RVR  +KE+G++K P  S  ++ NG++H+F 
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 538

Query: 726 SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
            G+ +HP  N I   L E+  RL   GY PDL++V  DV +  K+ +L  H+EKLA+AF 
Sbjct: 539 PGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFS 598

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L++T++   I ++KNLR+C DCH F +L S+V  + II+RDN RFH FR G CSC DFW
Sbjct: 599 LLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 193/405 (47%), Gaps = 41/405 (10%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           S  I  L +C  LN++KQ H H+L++GL      ++K++ T  ++G      YA++  + 
Sbjct: 50  SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYARRVIEP 108

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
               N      F++ ++IRGY+  G   EAI++Y  +    I P  FTF  +L AC    
Sbjct: 109 VQFRNP-----FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMK 163

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G Q H    ++     V+V N +I+ Y +C  I   R+VFDEM ER+V+SWT LI 
Sbjct: 164 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIA 223

Query: 213 ACAR----------------RDL---------------PKEAVYLFFEMVEEGIKPNSVT 241
           A AR                +D+               P+EA+  F  M + GI+ + VT
Sbjct: 224 AYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 283

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMV--NALVDMYMKCGAVDTAKQLFGE 299
           +   ISACA+L   +  DR      + G   +  +V  +AL+DMY KCG V+ A  +F  
Sbjct: 284 VAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMS 343

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLC 358
             ++N+   ++++      G A+EAL +   M+     +P+ VT + A+ A +  G +  
Sbjct: 344 MNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQ 403

Query: 359 GRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           GR     + +  G++        M+D+  + G+ + A  +   MS
Sbjct: 404 GRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448


>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
          Length = 633

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/571 (41%), Positives = 337/571 (59%), Gaps = 13/571 (2%)

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL--HGPRPDRV 341
           Y   G +D A  L     D   V   + +  +   GL R ALA+L EMLL  HG  P   
Sbjct: 66  YAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAH 125

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+ +++ A    G L  GR  HGY ++  L G   +   ++ MY + G+   A  +FD M
Sbjct: 126 TLSASLPAC---GCLAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGM 182

Query: 402 -SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
             +  VVS  ++++   K G ++ AR +F  +P +D + WN M+ G TQ     EA+ LF
Sbjct: 183 RPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLF 242

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG----IHCDMQLATALVDM 516
           R ML   ++ D V++V   SA   LG  +  +W+++++   G    +  + ++ TALVDM
Sbjct: 243 RQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDM 302

Query: 517 FARCGDPQRAMQVFRRME---KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           + +CG  + A+ VFR +     RDV AW A I   AM G   +A+E F ++  QG+ P  
Sbjct: 303 YYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTD 362

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I F+GVL ACSH GLV++G  LF +M + +G+ P++ HYGCMVDLLGRAG + EA DL++
Sbjct: 363 ITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQ 422

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           SM  +P+  +W SLL AC+ H+N+ +    A+ +       SG +VLLSN+YA+AGKW  
Sbjct: 423 SMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWRE 482

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           V RVR  M+  G++K PG S++EV  +V EF +GD SHP    I + L E+N   R  G+
Sbjct: 483 VGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGH 542

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VP    VL D+D+  K+  L+ HSEKLA+AFGLIST     I++VKNLR C DCH+  KL
Sbjct: 543 VPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKL 602

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           VS+   R+I+ RD NRFH F  GSCSC D+W
Sbjct: 603 VSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 186/453 (41%), Gaps = 80/453 (17%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C  +S      ++H A V+   D+D  V   L   Y   G +     +     +  
Sbjct: 30  LLAGCASAS---RAAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPT 86

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMV--EEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            V +TS I A + R L + A+ L  EM+    G+ P + T+   + AC     L +G  +
Sbjct: 87  AVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACG---CLAVGRAL 143

Query: 262 CAYIDELGMKANALMVNALVDMYM--------------------------------KCGA 289
             Y  +L +     +  AL+ MY                                 K G 
Sbjct: 144 HGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQ 203

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +D A+ LF     ++LV  N +M  Y + G   EAL +  +ML  G  PD V+++ A+SA
Sbjct: 204 LDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSA 263

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGW----DSICNTMIDMYMKCGKQEMACRIFDHM---S 402
            AQLG    GR  H +V   G          +   ++DMY KCG  E A  +F  +    
Sbjct: 264 VAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGG 323

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           ++ VV+WN++I G   +G    A E F ++  R    W T                    
Sbjct: 324 DRDVVAWNAMINGYAMHGRSREALEAFGQL--RAQGLWPT-------------------- 361

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG 521
                     +T +GV +AC + G +D  + ++A +E+  GI   ++    +VD+  R G
Sbjct: 362 ---------DITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAG 412

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
             + A  + + M+ K D + W + +GA  +  N
Sbjct: 413 RVEEAFDLVQSMKAKPDAAMWASLLGACRLHKN 445



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 159/359 (44%), Gaps = 54/359 (15%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVE--LAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           T   Y S I  +S  GL   A++L  E  L+  G+LP   T    L AC        G  
Sbjct: 86  TAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPAC---GCLAVGRA 142

Query: 160 VHGAIVKMGFDRDVFVENCLINF--------------------------------YGECG 187
           +HG  VK+    + +V   L+                                  Y + G
Sbjct: 143 LHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMG 202

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            + D R +FD +  +++V W +++    +   P EA+ LF +M+  G++P+ V++V  +S
Sbjct: 203 QLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALS 262

Query: 248 ACAKLQNLELGDRVCAYIDELGMKA----NALMVNALVDMYMKCGAVDTAKQLF---GEC 300
           A A+L   E G  + +++   G +A    NA +  ALVDMY KCG+++ A  +F   G  
Sbjct: 263 AVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGG 322

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
            DR++V  N +++ Y   G +REAL    ++   G  P  +T +  ++A +  G +  GR
Sbjct: 323 GDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGR 382

Query: 361 -----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLI 413
                M   Y +   +E +      M+D+  + G+ E A  +   M  K     W SL+
Sbjct: 383 ALFAAMEEEYGIVPKVEHY----GCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLL 437



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 38/185 (20%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I GY+  G   EA+  + +L   G+ P   TF  VLNAC+ S    EG  +  A+ 
Sbjct: 330 WNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAME 389

Query: 166 K-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           +  G    V    C+++  G  G + +                                 
Sbjct: 390 EEYGIVPKVEHYGCMVDLLGRAGRVEEA-------------------------------- 417

Query: 225 YLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
              F++V+    KP++     ++ AC   +NL LG RV  Y+   G+ AN+     L +M
Sbjct: 418 ---FDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGL-ANSGTYVLLSNM 473

Query: 284 YMKCG 288
           Y   G
Sbjct: 474 YAAAG 478


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/610 (37%), Positives = 341/610 (55%), Gaps = 32/610 (5%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           + P       +I+ACA+ +NL     + +++    +  +  ++N+L+ MY KCGAV  A+
Sbjct: 58  LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            +F     R++V    +++ Y +  +  EAL +L +ML    RP   T  S + A+   G
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
               G   H   ++  L+    + + ++DMY +C + +MA R+FD + +K          
Sbjct: 178 GRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSK---------- 227

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                                + +SWN ++ G  ++   E  +  F  M          T
Sbjct: 228 ---------------------NEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFT 266

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              V SA   +GAL+  +W++A++ K+G      +A  ++ M+A+ G    A +VF R++
Sbjct: 267 YSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVD 326

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           +RD+  W   + A A  G G++AV  F E+ + GI+ + I F+ VLTACSHGGLV +G  
Sbjct: 327 QRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQ 386

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F  M D + V P+I HY   VDLLGRAGLL EAL  +  MP+EP   +WG+LL AC+ H
Sbjct: 387 YFDMMKD-YNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 445

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +N  I  YAA+ + ELDPE +G  VLL NIYAS G+W + ARVR  MK  G++K P  S 
Sbjct: 446 KNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSW 505

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           +E+   VH F + D +HP+   I  M  E+N R++ AGYVP+   VLL + EQE++  L 
Sbjct: 506 VEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQ 565

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEK+A+AF LI+      IR++KN+R+C DCHS  + VS+V+ REI+VRD NRFH F 
Sbjct: 566 YHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFS 625

Query: 835 QGSCSCSDFW 844
            GSCSC D+W
Sbjct: 626 NGSCSCGDYW 635



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 203/447 (45%), Gaps = 35/447 (7%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P    +  ++ AC +S        +H  + +     D F+ N LI+ Y +CG + D R
Sbjct: 58  LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            VFD +  R+VVSWT LI   A+ D+P EA+ L  +M+    +P+  T    + A     
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
              +G+++ A   +  +  +  + +AL+DMY +C  +D A ++F     +N V  N +++
Sbjct: 178 GRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIA 237

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            + R G     L    EM  +G      T  S  SA A++G L  GR  H +++++G + 
Sbjct: 238 GFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKL 297

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + NT++ MY K G    A ++FD +  + +V+W                        
Sbjct: 298 TAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTW------------------------ 333

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                  NTML    Q  + +EA+  F  +    I+++++T + V +AC + G +   K 
Sbjct: 334 -------NTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQ 386

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ-VFRRMEKRDVSAWTAAIGAMAMEG 552
            +  ++   +  ++    + VD+  R G  + A+  VF+   +   + W A +GA  M  
Sbjct: 387 YFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHK 446

Query: 553 N---GEQAVELFNEMLRQGIKPDSIVF 576
           N   G+ A +   E+  +   P  +++
Sbjct: 447 NAKIGQYAADHVFELDPEDTGPPVLLY 473



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 163/346 (47%), Gaps = 5/346 (1%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           ++ D   +  +  +  LI GY+   +  EA+ L  ++      P  FTF   L A     
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
             G G Q+H   VK   D DV+V + L++ Y  C  +    RVFD +  +N VSW +LI 
Sbjct: 178 GRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIA 237

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             AR+   +  +  F EM   G      T   V SA A++  LE G  V A++ + G K 
Sbjct: 238 GFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKL 297

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
            A + N ++ MY K G++  A+++F     R+LV  NT+++ + + GL +EA+A  +E+ 
Sbjct: 298 TAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIR 357

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG-KQ 391
            +G + +++T LS ++A +  G +  G+     +    +E       + +D+  + G  +
Sbjct: 358 KYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLK 417

Query: 392 EMACRIFDHMSNKTVVSWNSLIAG--LIKNGDV--ESAREVFSEMP 433
           E    +F      T   W +L+    + KN  +   +A  VF   P
Sbjct: 418 EALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDP 463


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/619 (38%), Positives = 352/619 (56%), Gaps = 41/619 (6%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+  G  PN+ T    I +CA L     G ++  ++ + G      +  +L+ MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 290 VDTAKQLFGE-CKDRNLVLC-NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           +D A++LF E  + R L +C N+++S Y      ++ + +  EM   G   + VTML  V
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
                 G+L  G   HG+ ++ GL+   S+ N ++ MY                      
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMY---------------------- 158

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                    +K+G+++  R++F EMP +  I+WN M+ G  Q  +    +EL++ M S+ 
Sbjct: 159 ---------VKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKG 209

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
              D +T+VGV S+C +LGAL + K +   +E  G   +  L  ALV+M+ARCG+ ++A 
Sbjct: 210 FCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKAR 269

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            +F  M  + V +WTA IG   M G GE AV LF+EM+R GIKPD   FV VL+ACSH G
Sbjct: 270 DIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAG 329

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           L N+G   F  M   +G+ P   HY CMVDLLGRAG L EA +LI+SM V  +  +WG+L
Sbjct: 330 LTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGAL 389

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC+ H+NV++A  A E++ EL+P  +G +VLLSN+Y  AG    + RVR+ M+++ ++
Sbjct: 390 LGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLK 449

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K PG S +E  G+VH F +GD +HP+ N I   L E+         V DL     +  E+
Sbjct: 450 KDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELE------NLVKDLDGCKKNDHER 503

Query: 768 EKKYLLSH--HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
            ++YL S   HSEKLA+AF L++T K   I ++KNLR+C DCH F KLVSK+ DR+ +VR
Sbjct: 504 REEYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVR 563

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D  RFH F+ G CSC ++W
Sbjct: 564 DATRFHHFKNGFCSCKEYW 582



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 209/437 (47%), Gaps = 35/437 (8%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G  P+ FTFPF + +C   S    G Q+H  + K G   + FV+  LI+ YG+C  I + 
Sbjct: 5   GASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNA 64

Query: 193 RRVFDE--MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           R++FDE   S +  V + SL+   A     K+ V LF EM E G++ N VTM+ ++  C 
Sbjct: 65  RKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCG 124

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
              NL LG  V  +  + G+  ++ + N L+ MY+K G +D  ++LF E   + L+  N 
Sbjct: 125 IPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNA 184

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++ Y + GLA   L +  EM   G  PD +T++  +S+ A LG L  G+     +   G
Sbjct: 185 MINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFG 244

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
                 + N +++MY +CG  + A  IFD M  K+VVSW ++I G   +G  E A  +F 
Sbjct: 245 FSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFD 304

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
           EM          + GG                     IK D    V V SAC + G  + 
Sbjct: 305 EM----------IRGG---------------------IKPDGTAFVSVLSACSHAGLTNK 333

Query: 491 AKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAM 548
               +  +E K G+    +  + +VD+  R G    A ++   M+ R D + W A +GA 
Sbjct: 334 GLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGAC 393

Query: 549 AMEGNGEQAVELFNEML 565
            +  N E A   F +++
Sbjct: 394 KIHRNVELAELAFEQVI 410



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 200/406 (49%), Gaps = 23/406 (5%)

Query: 38  SLKNCKTLN---ELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           ++K+C  L+     KQ HCH+ K G   +P   + ++   +  G    +  A+K FD   
Sbjct: 16  AIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLI---SMYGKCSLIDNARKLFD--- 69

Query: 95  KDNETSATLFM-YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
            +N  S  L + YNSL+ GY+      + + L+ E+   G+  +  T   ++  C     
Sbjct: 70  -ENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGN 128

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
            G G+ VHG  VK G D D  V NCL+  Y + G+I  GR++FDEM  + +++W ++I  
Sbjct: 129 LGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMING 188

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A+  L    + L+ EM  +G  P+ +T+V V+S+CA L  L +G  V   ++  G  +N
Sbjct: 189 YAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSN 248

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             + NALV+MY +CG +  A+ +F     +++V    I+  Y   G    A+ + DEM+ 
Sbjct: 249 PFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIR 308

Query: 334 HGPRPDRVTMLSAVSASAQLG------DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
            G +PD    +S +SA +  G      D   G M   Y LR G E +    + M+D+  +
Sbjct: 309 GGIKPDGTAFVSVLSACSHAGLTNKGLDYF-GVMERKYGLRPGAEHY----SCMVDLLGR 363

Query: 388 CGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
            G+   A  + + M  +   + W +L+     + +VE A   F ++
Sbjct: 364 AGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQV 409


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/640 (37%), Positives = 356/640 (55%), Gaps = 35/640 (5%)

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W + +   A+R    +A+ L+ +M+  G +PN+ T    + +CA L    LG +    I 
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNLVLC-NTIMSNYVRLGLAREA 324
           ++G      +   L+ MY K   VD A+++F E    R L +C N ++S YV      EA
Sbjct: 77  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           + +  +M   G   + VT+L  + A     +L  G   H   L+ G +   S+ N  I M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           YMKCG                                V  A+++F EMP +  ISWN M+
Sbjct: 197 YMKCG-------------------------------SVNYAQKLFDEMPVKGLISWNAMV 225

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
            G  Q  +    +EL+R M    +  D VT+VGV S+C  LGA  +   +   I+ +G  
Sbjct: 226 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFT 285

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            +  L  AL++M+ARCG+  +A  VF  M +R + +WTA IG   M G+GE AV+LF EM
Sbjct: 286 SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEM 345

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
           +R GI+PD   FV VL+ACSH GL +QG   F+ M   + + P   HY CMVDLLGRAG 
Sbjct: 346 IRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGR 405

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA  LI+SMP++P+  +WG+LL AC+ H+NV++A  A ER+ EL+PE  G +VLLSNI
Sbjct: 406 LKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNI 465

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           Y++A     V R+R+ MKE+ ++K PG S +E+ G+VH F  GD +H + + I  +L E+
Sbjct: 466 YSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEEL 525

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
              +      P+  N   +   ++    +  HSEKLA+AFGL++T+    + ++KNLR+C
Sbjct: 526 EAIIMQEFGKPEKDN--REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRIC 583

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH F K+VSK+  R++ VRD  RFH FR GSCSC D+W
Sbjct: 584 EDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 227/466 (48%), Gaps = 37/466 (7%)

Query: 120 VEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
           ++A+SLY ++   G  P+ FTFPF L +C   S    G Q HG I K+G   + FV+  L
Sbjct: 31  LQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 90

Query: 180 INFYGECGDIVDGRRVFDE--MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
           I+ Y +   + + R+VF+E   S +  V + +L+          EAV LF +M EEG+  
Sbjct: 91  ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPV 150

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           NSVT++ +I AC    NLELG  +     + G  ++  +VN  + MYMKCG+V+ A++LF
Sbjct: 151 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 210

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
            E   + L+  N ++S Y + GLA   L +   M ++G  PD VT++  +S+ A LG   
Sbjct: 211 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 270

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            G      +  +G      + N +I+MY +CG    A  +FD M  +T+VSW ++I G  
Sbjct: 271 VGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG 330

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
            +G  E                                A++LF+ M+   I+ D    V 
Sbjct: 331 MHGHGEI-------------------------------AVQLFKEMIRSGIEPDGTAFVC 359

Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-K 535
           V SAC + G  D     +  +++N  +    +  + +VD+  R G  + A  +   M  K
Sbjct: 360 VLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIK 419

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
            D + W A +GA  +  N E A   F  ++   ++P++I +  +L+
Sbjct: 420 PDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENIGYYVLLS 463



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 98/199 (49%), Gaps = 8/199 (4%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           HC  LK G     S +S V C         S+ YAQK F     D      L  +N+++ 
Sbjct: 175 HCSTLKYGFD---SDVSVVNCFITMYMKCGSVNYAQKLF-----DEMPVKGLISWNAMVS 226

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
           GY+  GL    + LY  +   G+ PD  T   VL++C    A   G +V   I   GF  
Sbjct: 227 GYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTS 286

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           + F+ N LIN Y  CG++   + VFD M ER +VSWT++I         + AV LF EM+
Sbjct: 287 NPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMI 346

Query: 232 EEGIKPNSVTMVCVISACA 250
             GI+P+    VCV+SAC+
Sbjct: 347 RSGIEPDGTAFVCVLSACS 365


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/611 (38%), Positives = 351/611 (57%), Gaps = 38/611 (6%)

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD---MYMKCGAVDTAK 294
           N +  + ++S C  L  L+   ++ AY  +  ++++  ++  L++   +      +D A 
Sbjct: 28  NQLHPLSLLSKCTSLNELK---QIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAH 84

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            LF +  D++++L N +   Y R      A ++  E+L  G  PD  T  S + A A   
Sbjct: 85  HLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSK 144

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            L  G   H + ++ GL     IC T+I+MY +C                          
Sbjct: 145 ALREGMGLHCFAVKLGLNHNIYICPTLINMYAECN------------------------- 179

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                 D+ +AR VF EM     +S+N ++ G  + +   EA+ LFR + +  I+   VT
Sbjct: 180 ------DMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVT 233

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           M+ V  +C  LGALDL KWI+ Y++K G    +++ TAL+DMFA+CG    A+ +F  M 
Sbjct: 234 MLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMR 293

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
            RD  AW+A I A A  G+G +A+ +F EM R+G++PD I F+G+L ACSH GLV QG  
Sbjct: 294 VRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRG 353

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F SM+  +G++P I HYGCMVDLLGRAG L EA + +  + ++   ++W +LL+AC  H
Sbjct: 354 YFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTH 413

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
            NV++A    ERI ELD    G +V+LSN+YA  G+W +V  +R  MK++G+ K+PG SS
Sbjct: 414 GNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSS 473

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL-LDVDEQEKKYLL 773
           +EVN  VHEF SGD  H     +   L E+   ++  GYVPD + V   D++E+ K+ +L
Sbjct: 474 VEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVL 533

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
            +HSEKLAMAFGL++T     IRV KNLR+C DCH+ AKL+S ++ R+I++RD  RFH F
Sbjct: 534 RYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRF 593

Query: 834 RQGSCSCSDFW 844
             G CSC DFW
Sbjct: 594 EDGKCSCGDFW 604



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 238/487 (48%), Gaps = 28/487 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L  C +LNELKQ   + +K  L    S ++K++  C    T   + +A   FD  +  + 
Sbjct: 36  LSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKD- 94

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
               + ++N + RGY+       A SL+ EL   G+LPD +TF  +L AC  S A  EG+
Sbjct: 95  ----IILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGM 150

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +H   VK+G + ++++   LIN Y EC D+   R VFDEM +  +VS+ ++I   AR  
Sbjct: 151 GLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSS 210

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
            P EA+ LF E+    I+P  VTM+ VI +CA L  L+LG  +  Y+ + G      +  
Sbjct: 211 QPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNT 270

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           AL+DM+ KCG++  A  +F   + R+    + ++  +   G   +A+++ +EM   G RP
Sbjct: 271 ALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRP 330

Query: 339 DRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           D +T L  + A +  G +  GR     M   Y +  G++ +      M+D+  + G  + 
Sbjct: 331 DEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHY----GCMVDLLGRAGHLDE 386

Query: 394 ACRIFDHMSNK-TVVSWNSLIAGLIKNGDVESAREVFSEMPGRD--HISWNTMLGGLTQE 450
           A    D +  K T + W +L++    +G+VE A+ V   +   D  H     +L  L   
Sbjct: 387 AYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYAR 446

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQL 509
               E +   R ++ +R         GV    G   ++++   ++ +   +G+HC  ++L
Sbjct: 447 VGRWEDVNHLRKLMKDR---------GVVKVPG-CSSVEVNNVVHEFFSGDGVHCVSVEL 496

Query: 510 ATALVDM 516
             AL ++
Sbjct: 497 RRALDEL 503


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/814 (32%), Positives = 435/814 (53%), Gaps = 44/814 (5%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +LK+C+  ++ +Q H    K GL     ++   + +    G    +  A+K F+     N
Sbjct: 73  ALKSCRG-DDGRQVHAVAAKLGLADGDPFVGNSLVS--MYGRCGRVDDAEKVFEGMAGRN 129

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
                L  +N+L+   +    G+E     +E  G    PD+ T   VL  C   +    G
Sbjct: 130 -----LVSWNALMAAVADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETG 184

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM---SERNVVSWTSLICAC 214
             VHG  VK G+D    V N L++ Y +CG++ D    F E    + RNVVSW  ++   
Sbjct: 185 RAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGY 244

Query: 215 ARRDLPKEAVYLFFEMV--EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
           AR      A  L  EM   E G+  + +TM+ V+  C+ L  L     + A++   G+  
Sbjct: 245 ARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHL 304

Query: 273 NALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
              MV NAL+  Y +CG +  A ++F     + +   N ++  + + G A  A+ +  EM
Sbjct: 305 TGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREM 364

Query: 332 L-LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
               G +PD  ++ S + A   L  LL G+  HG++LRNGLE    I  +++ +Y++CG+
Sbjct: 365 TNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGR 424

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
           + +A  +FD +  K  VSWN++IAG  +NG    + ++F EM  +    W ++L   +  
Sbjct: 425 ESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATS-- 482

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
                                         AC  L A+ L K ++ +  K  +  D  L+
Sbjct: 483 ---------------------------ALVACSELPAVRLGKEMHCFALKADLCEDSFLS 515

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           ++++DM+++CG    A   F R++ +D  +WT  I   A+ G G++AV L+++M R+G++
Sbjct: 516 SSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGME 575

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD   ++G+L AC H G++  G   F+ M ++  +  ++ HY C++ +L RAG   +A+ 
Sbjct: 576 PDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVA 635

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           L++ MP EP+  I  S+L+AC  H  V++    A+++ EL+P K+  +VL SN+YA + +
Sbjct: 636 LMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQ 695

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W  + +VR  +++ G+ K PG S I++ GKV+ F +G+ S PEM+ +  M   +  ++R 
Sbjct: 696 WDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRA 755

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           AGY PD T +L +++E+EK   L  HSEK A+AFGL+ T+    +RV KN+R+C DCH+ 
Sbjct: 756 AGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNA 815

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           AKL+SKV DREI+VRD  RFH FR G CSC D+W
Sbjct: 816 AKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 239/500 (47%), Gaps = 51/500 (10%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGE 156
            +A+L  +N L+   S  G   +A+++   L  A  G+ PD+FT P  L +C       +
Sbjct: 26  NAASLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGD----D 81

Query: 157 GVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           G QVH    K+G  D D FV N L++ YG CG + D  +VF+ M+ RN+VSW +L+ A A
Sbjct: 82  GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA 141

Query: 216 RRDLPKEAVYLFFEMVEE---GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
               P+  + LF + +E+      P+  T+V V+  CA L   E G  V     + G  A
Sbjct: 142 D---PRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDA 198

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKD---RNLVLCNTIMSNYVRLGLAREALAILD 329
              + N LVDMY KCG +  A+  F E      RN+V  N ++  Y R G A  A  +L 
Sbjct: 199 APRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLR 258

Query: 330 EMLL--HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE-GWDSICNTMIDMYM 386
           EM +   G   D +TMLS +   + L +L   R  H +V+R GL    D + N +I  Y 
Sbjct: 259 EMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYG 318

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           +CG    ACR+FD + +K V SWN+LI    +NG+  +A E+F EM              
Sbjct: 319 RCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREM-------------- 364

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
               N   +             K D  ++  +  ACG L  L   K  + +I +NG+  D
Sbjct: 365 ---TNACGQ-------------KPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKD 408

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML- 565
             +  +L+ ++ +CG    A  +F  +E++D  +W   I   +  G   ++++LF EM  
Sbjct: 409 SFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQS 468

Query: 566 -RQGIKPDSIVFVGVLTACS 584
            + G  P  +     L ACS
Sbjct: 469 KKGGHWPSLLAATSALVACS 488


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/740 (33%), Positives = 396/740 (53%), Gaps = 34/740 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F +N ++ GY   GL  EA+ LY  +   G+ PD +TFP VL +C     +  G +VH 
Sbjct: 154 VFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHA 213

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ GF  +V V N L+  Y +CGD++  R+VFD M+  + +SW ++I           
Sbjct: 214 HVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNA 273

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + LF  M+ + ++PN +T+  V  A   L ++     +     + G   +    N+L+ 
Sbjct: 274 GLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQ 333

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY   G +  A+ +F     R+ +    ++S Y + G   +AL +   M ++   PD +T
Sbjct: 334 MYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDIT 393

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + SA++A A LG L  G   H      G   +  + N +++MY K  +            
Sbjct: 394 IASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKR------------ 441

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
                              ++ A EVF  M  +D +SW++M+ G    +   EA+  FR 
Sbjct: 442 -------------------IDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRH 482

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML++ +K + VT +   +AC   GAL   K I+A++ + GI  +  L  AL+D++ +CG 
Sbjct: 483 MLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQ 541

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              A   F     +DV +W   I      G+G+ A+  FN+M++ G  PD + FV +L A
Sbjct: 542 TGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCA 601

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS GG+V++GW LF SMT+ + + P + HY CMVDLL RAG L EA + I  MP+ P+  
Sbjct: 602 CSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAA 661

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WG+LL  C+ H++V++   AA+ +  L+P  +G HVLL ++YA A  W  +ARVR  M+
Sbjct: 662 VWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMR 721

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
           E+G+    G S +EV G VH F + DESHP++  I+++L  +  R++ +GY P  ++   
Sbjct: 722 EKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVESHC-- 779

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
             DE  K  +   HSE+LA+AFGLI+T+    I V KN   C  CH   K++S +  R+I
Sbjct: 780 PEDEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDI 839

Query: 823 IVRDNNRFHFFRQGSCSCSD 842
           IVRD+ + H F+ GSCSC D
Sbjct: 840 IVRDSKQLHHFKDGSCSCGD 859



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 210/466 (45%), Gaps = 38/466 (8%)

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
           T L   C+   L  +A++L     E    P+    V +   C   + +E G R CA+ D+
Sbjct: 61  TELRALCSHGQL-AQALWLLESSAE---PPDEDAYVALFRLCEWRRAVEPGLRACAHADD 116

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
                   + NA++ M ++ G    A ++F +  +R++   N ++  Y + GL  EAL +
Sbjct: 117 RHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDL 176

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
              M+  G RPD  T    + +   + D   GR  H +VLR G      + N ++ MY K
Sbjct: 177 YHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAK 236

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG    A ++FD M+    +SWN++IAG  +NG+  +                       
Sbjct: 237 CGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNA----------------------- 273

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
                    +ELF  ML + ++ + +T+  V  A G L  +  AK ++    K G   D+
Sbjct: 274 --------GLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDV 325

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
               +L+ M+A  G  ++A  VF RM+ RD   WTA I      G  ++A+E++  M   
Sbjct: 326 AFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVN 385

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
            + PD I     L AC+  G ++ G  L   + +  G    IV    ++++  ++  + +
Sbjct: 386 NVSPDDITIASALAACACLGSLDVGVKL-HELAESKGFISYIVVTNAILEMYAKSKRIDK 444

Query: 628 ALDLIKSMPVEPNDVIWGSLLAA-CQKHQNVDIAAYAAERITELDP 672
           A+++ K M  E + V W S++A  C  H+N +   Y    + ++ P
Sbjct: 445 AIEVFKCMH-EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKP 489



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 208/419 (49%), Gaps = 13/419 (3%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           ++ H H+L+ G G +   ++ ++   A+ G    +  A+K FD     + T      +N+
Sbjct: 209 REVHAHVLRFGFGEEVDVLNALMTMYAKCG---DVMAARKVFD-----SMTVMDCISWNA 260

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +I G+   G     + L++ +    + P+  T   V  A    S      ++HG  VK G
Sbjct: 261 MIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRG 320

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           F  DV   N LI  Y   G +   R VF  M  R+ ++WT++I    +   P +A+ ++ 
Sbjct: 321 FAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYA 380

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M    + P+ +T+   ++ACA L +L++G ++    +  G  +  ++ NA+++MY K  
Sbjct: 381 LMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSK 440

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +D A ++F    ++++V  +++++ +       EAL     ML    +P+ VT ++A++
Sbjct: 441 RIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAALA 499

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A A  G L  G+  H +VLR G+E    + N +ID+Y+KCG+   A   F     K VVS
Sbjct: 500 ACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVS 559

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPG----RDHISWNTMLGGLTQENMFEEAMELFRVM 463
           WN +IAG + +G  ++A   F++M       D +++  +L   ++  M  E  ELF  M
Sbjct: 560 WNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSM 618


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/704 (34%), Positives = 378/704 (53%), Gaps = 67/704 (9%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           V+ +C +  A  EG ++H  + ++G   DV+V N L+  YG+CG + + R VF+    +N
Sbjct: 40  VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQNLELGDRVC 262
           V SWT LI  CA+    +EA+ LF+EM+++GI+P+SV+    I+AC A  + L  G  + 
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           A +   G +   +   +LV MY KCG+++ + + F    + N V  N +++ +       
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGL 219

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL  L +M L G R                 D++ G                    T++
Sbjct: 220 EALRTLQKMFLEGIRA--------------CSDVVVG-------------------TTLV 246

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           +MY KC     A   F  +    +++WN LI+  +                         
Sbjct: 247 NMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYV------------------------- 281

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
                 Q   F+EAMELFR ML   +++D VT + +  AC    AL+  + I+A + ++ 
Sbjct: 282 ------QHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHP 335

Query: 503 IHCD-MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           +  +   L   +++M+ +CG  Q A  +F+ M + DV AW   I A    G+  +A+  +
Sbjct: 336 LASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFY 395

Query: 562 NEMLRQGIKPDSIVFVGVLTA-CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
             M  +G+ PD   +V V+ A C++ GL  +    F SM   HGV P   HYGCMV+ LG
Sbjct: 396 ELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLG 455

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           +AG L +A  LI+ MP EP+ + W S LA C+ H ++     AA+    +DPE S  +V 
Sbjct: 456 KAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVA 515

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           L+ I+A AG +   +R+R  M ++GIRK  G S I++   V+EFT+GD+S+P    I   
Sbjct: 516 LARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDE 575

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L+ ++  ++ AGY PD+ +V  DV+  +K+ LL  HSE+LA+AFG+ISTS   P+R++KN
Sbjct: 576 LKRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKN 635

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH+  KL SK+  REIIVRD+NRFH F+ GSCSC DFW
Sbjct: 636 LRVCGDCHTMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 679



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 43/399 (10%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I S      L E ++ H  + + GLG      + +V    + G+ E    A+  F+    
Sbjct: 41  IQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEE---ARLVFEATPA 97

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF- 154
            N     +F +  LI   +  G   EA++L+ E+   GI P   +F   +NAC+    F 
Sbjct: 98  KN-----VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFL 152

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  +H  + + GF   V     L++ Y +CG + +  R F+ M+E N VSW ++I A 
Sbjct: 153 PAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAF 212

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A      EA+    +M  EGI+           AC                      ++ 
Sbjct: 213 AEHRRGLEALRTLQKMFLEGIR-----------AC----------------------SDV 239

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           ++   LV+MY KC  +  A   F + ++ N++  N ++S YV+    +EA+ +   MLL 
Sbjct: 240 VVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLL 299

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS-ICNTMIDMYMKCGKQEM 393
           G   D VT ++ + A      L  GR  H  V  + L    + + N +++MY KCG  + 
Sbjct: 300 GLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQD 359

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
           A  +F  MS   V++WN++IA   ++G    A   +  M
Sbjct: 360 AEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELM 398



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 1/192 (0%)

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
           L +R   D    V V  +C  LGAL   + I+  + + G+  D+ ++  LV M+ +CG  
Sbjct: 26  LQKRKDADLKECVRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSL 85

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           + A  VF     ++V +WT  I   A  G  ++A+ LF EML+QGI+P S+ F   + AC
Sbjct: 86  EEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINAC 145

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           S G           ++   +G    +V    +V +  + G L E++   +SM  EPN V 
Sbjct: 146 SAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESM-TEPNAVS 204

Query: 644 WGSLLAACQKHQ 655
           W +++AA  +H+
Sbjct: 205 WNAMIAAFAEHR 216



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I  Y   G   EA+  Y  +   G++PD +T+  V++A   ++   E  + H   V
Sbjct: 375 WNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPE--EAHAYFV 432

Query: 166 KMGFDRDVFV----ENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
            M  D  V        C++   G+ G + D   +   M  E +V++WTS +  C
Sbjct: 433 SMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANC 486


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/726 (34%), Positives = 385/726 (53%), Gaps = 48/726 (6%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P+ +TFPF L AC+  +    G  +H   +  G   D+FV   L++ Y +C  + D  
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAV--YLFFEMVEEGIKPNSVTMVCVISACAK 251
            +F  M  R++V+W +++   A   +   AV   L  +M    ++PN+ T+V ++   A+
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 252 LQNLELGDRVCAYIDELGMKAN----------ALMVNALVDMYMKCGAVDTAKQLFGECK 301
              L  G  V AY     +  N           L+  AL+DMY KCG++  A+++F    
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP---RPDRVTMLSAVSASAQLGDLLC 358
            RN V  + ++  +V      +A  +   ML  G     P  +   SA+ A A L  L  
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRM 243

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G   H  + ++G+    +  N+++ MY K                          AGLI 
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAK--------------------------AGLI- 276

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
               + A  +F EM  +D +S++ ++ G  Q    EEA  +F+ M +  ++ D  TMV +
Sbjct: 277 ----DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSL 332

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC +L AL   +  +  +   G+  +  +  AL+DM+A+CG    + QVF  M  RD+
Sbjct: 333 IPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI 392

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W   I    + G G++A  LF EM   G  PD + F+ +L+ACSH GLV +G H F  
Sbjct: 393 VSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 452

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M   +G++P++ HY CMVDLL R G L EA + I+SMP+  +  +W +LL AC+ ++N+D
Sbjct: 453 MGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNID 512

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +    +  I EL PE +G  VLLSNIY++AG++   A VR+  K QG +K PG S IE+N
Sbjct: 513 LGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 572

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           G +H F  GD+SHP+   I   L  +   ++  GY PD + VL D++E+EK+  L  HSE
Sbjct: 573 GSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSE 632

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           KLA+A+G++S S+   I V KNLR+C DCH+  K +S V  R IIVRD NRFH F+ G C
Sbjct: 633 KLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQC 692

Query: 839 SCSDFW 844
           SC DFW
Sbjct: 693 SCGDFW 698



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 135/321 (42%), Gaps = 45/321 (14%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           ML H   P+  T   A+ A + L D  CGR  H + +  GL+    +   ++DMY+KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  IF  M  + +V+WN+++AG   +G    A      M  + H             
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH------------- 107

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD---- 506
                           R++ +  T+V +       GAL     ++AY  +  +H +    
Sbjct: 108 ----------------RLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151

Query: 507 ------MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
                 + L TAL+DM+A+CG    A +VF  M  R+   W+A IG   +     QA  L
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211

Query: 561 FNEMLRQG---IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           F  ML QG   + P SI     L AC+    +  G  L  ++    GV   +     ++ 
Sbjct: 212 FKAMLAQGLCFLSPTSI--ASALRACASLDHLRMGEQL-HALLAKSGVHADLTAGNSLLS 268

Query: 618 LLGRAGLLGEALDLIKSMPVE 638
           +  +AGL+ +A+ L   M V+
Sbjct: 269 MYAKAGLIDQAIALFDEMAVK 289



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)

Query: 38  SLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD-YY 93
           +L+ C +L+ L+   Q H  + K G+    +  + ++   A+ G  +    A   FD   
Sbjct: 231 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ---AIALFDEMA 287

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           +KD  +      Y++L+ GY   G   EA  ++ ++    + PD  T   ++ AC+  +A
Sbjct: 288 VKDTVS------YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 341

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G   HG+++  G   +  + N LI+ Y +CG I   R+VF+ M  R++VSW ++I  
Sbjct: 342 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 401

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
                L KEA  LF EM   G  P+ VT +C++SAC+
Sbjct: 402 YGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 438



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 21/233 (9%)

Query: 30  PKDSPSIGSLKNCKTLNELKQPHCH---ILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  +  +  +  C  L  L+   C    ++ +GL  + S  + ++   A+ G  +    +
Sbjct: 324 PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID---LS 380

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ F+        S  +  +N++I GY   GLG EA +L++E+   G  PD  TF  +L+
Sbjct: 381 RQVFNMM-----PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 435

Query: 147 ACTKSSAFGEGVQ-VHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMSER- 202
           AC+ S    EG    H  ++  G+     +E+  C+++     G + +       M  R 
Sbjct: 436 ACSHSGLVIEGKHWFH--VMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 493

Query: 203 NVVSWTSLICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           +V  W +L+ AC      DL K+   +  E+  EG   N V +  + SA  + 
Sbjct: 494 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG-NFVLLSNIYSAAGRF 545


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/748 (34%), Positives = 388/748 (51%), Gaps = 42/748 (5%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NSLI GY+ +G   E ++L+ E     +  DKFTF   L+ C ++     G  +H  I 
Sbjct: 9   WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             G    V + N LI+ Y +CG I   R VF+   E + VSW SLI    R     E + 
Sbjct: 69  VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAK--LQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           L  +M+  G+  NS  +   + AC      ++E G  +     +LG+  + ++  AL+D 
Sbjct: 129 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDT 188

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG-----LAREALAILDEMLLHGPRP 338
           Y K G ++ A ++F    D N+V+ N +++ ++++       A EA+ +  EM   G +P
Sbjct: 189 YAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKP 248

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
              T  S + A + +    CG+  H  + +  L+  + I N ++++Y             
Sbjct: 249 SEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY------------- 295

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
                       SL      +G +E   + F   P  D +SW +++ G  Q   FE  + 
Sbjct: 296 ------------SL------SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLT 337

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           LF  +L    K D  T+  + SAC  L A+   + I+AY  K GI     +  + + M+A
Sbjct: 338 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 397

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CGD   A   F+  +  D+ +W+  I + A  G  ++AV+LF  M   GI P+ I F+G
Sbjct: 398 KCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLG 457

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL ACSHGGLV +G   F  M   HG++P + H  C+VDLLGRAG L EA   I     E
Sbjct: 458 VLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFE 517

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
            + V+W SLL+AC+ H+  D     AER+ EL+PE +  +VLL NIY  AG       +R
Sbjct: 518 GDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIR 577

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
             MK++G++K PG S IEV   VH F +GD SHP    I   L EM   ++   Y+ +  
Sbjct: 578 NLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDE-- 635

Query: 759 NVLLDVDEQEKK--YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
            ++ D  E + K   ++S+HSEKLA+ FG+IS  ++ P+RV+KNLR C  CH   KL S+
Sbjct: 636 KLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSR 695

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + +REII+RD  RFH FR GSCSC D+W
Sbjct: 696 LENREIILRDPIRFHRFRDGSCSCGDYW 723



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 220/488 (45%), Gaps = 61/488 (12%)

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M +RNVVSW SLI    +     E + LF E     ++ +  T    +S C +  +L LG
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             + A I   G+    L+ N+L+DMY KCG +D A+ +F    + + V  N++++ YVR+
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSA--SAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           G   E L +L +ML HG   +   + SA+ A  S     + CG+M HG  ++ GL+    
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +   ++D Y K G  E A +IF  M +  VV +N++IAG ++   +E+  + F+      
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ---METMADEFA------ 231

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                             EAM LF  M S  +K    T   +  AC  + A +  K I+A
Sbjct: 232 -----------------NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHA 274

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            I K  +  D  +  ALV++++  G  +  ++ F    K DV +WT+ I      G  E 
Sbjct: 275 QIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEG 334

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF-------------------- 596
            + LF+E+L  G KPD      +L+AC++   V  G  +                     
Sbjct: 335 GLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQIC 394

Query: 597 ----------RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVI 643
                      +MT     +P IV +  M+    + G   EA+DL + M    + PN + 
Sbjct: 395 MYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHIT 454

Query: 644 WGSLLAAC 651
           +  +L AC
Sbjct: 455 FLGVLVAC 462



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 157/311 (50%), Gaps = 13/311 (4%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K  H   +K GL       + ++ T A++G  E    A K F      N     + MYN+
Sbjct: 164 KMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLED---ATKIFKLMPDPN-----VVMYNA 215

Query: 109 LIRGYSCIG-----LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           +I G+  +         EA+ L+ E+   G+ P +FTF  +L AC+   AF  G Q+H  
Sbjct: 216 MIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQ 275

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           I K     D F+ N L+  Y   G I DG + F    + +VVSWTSLI    +    +  
Sbjct: 276 IFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGG 335

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + LF E++  G KP+  T+  ++SACA L  ++ G+++ AY  + G+    ++ N+ + M
Sbjct: 336 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICM 395

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG +D+A   F E K+ ++V  + ++S+  + G A+EA+ + + M   G  P+ +T 
Sbjct: 396 YAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 455

Query: 344 LSAVSASAQLG 354
           L  + A +  G
Sbjct: 456 LGVLVACSHGG 466



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 13/181 (7%)

Query: 39  LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L  C  L  +K   Q H + +K G+G+     +  +C  A+ G  +S     K       
Sbjct: 358 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK------- 410

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
               +  +  ++ +I   +  G   EA+ L+  + G GI P+  TF  VL AC+      
Sbjct: 411 -ETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVE 469

Query: 156 EGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRR-VFDEMSERNVVSWTSLICA 213
           EG++    + K  G   +V    C+++  G  G + +    + D   E + V W SL+ A
Sbjct: 470 EGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 529

Query: 214 C 214
           C
Sbjct: 530 C 530


>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/607 (37%), Positives = 341/607 (56%), Gaps = 41/607 (6%)

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF--------G 298
           S C  L  L    ++ A+I + G++ N L++           ++  A             
Sbjct: 26  SHCNTLSKLT---QIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTST 82

Query: 299 ECKDRNLVLCNTIMSNYVRLGLARE-ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
                +  L NT++  Y +   ++  +      ML +G  P++ T    +   A +G L 
Sbjct: 83  PTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLR 142

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            G+  HG V++ G E    + NT+I MY   G+                           
Sbjct: 143 LGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGED-------------------------- 176

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
                E A +VF + P  D ++W+ M+ G  +      A++LFR M    +  D +TMV 
Sbjct: 177 ---GFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVS 233

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
           V SAC  LGAL+L KW+ +Y+EK  I   ++L  AL+DMFA+CG+  +A+++FR+M+ R 
Sbjct: 234 VLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRT 293

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           + +WT+ I  +AM G G  AV LF+EM+  GI PD + F+GVL+ACSH GLV++G + F 
Sbjct: 294 IVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFG 353

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           SM     + P++ HYGCMVDLL R G + EA + ++ MP EPN +IW +++ AC     +
Sbjct: 354 SMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGEL 413

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
            +    ++ + + +P     +VLLSNIYA   +W    +VR  M  +G++K+PGS+ IEV
Sbjct: 414 KLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEV 473

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
           N +++EF +GD+SH +   I  M+ EM   ++ AGYVP  + VLLD+DE++K+  L  HS
Sbjct: 474 NNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHS 533

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           EKLA+AF L++T     IR+VKNLR+C DCHS  K +SKVY+REI+VRD NRFH F+ G 
Sbjct: 534 EKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGL 593

Query: 838 CSCSDFW 844
           CSC DFW
Sbjct: 594 CSCRDFW 600



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 211/443 (47%), Gaps = 34/443 (7%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           + L +N     L   T+ TL N H                 C TL++L Q H  ILK GL
Sbjct: 4   LKLPINTPKTRLTEQTILTLLNSH-----------------CNTLSKLTQIHAFILKTGL 46

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCI-GLG 119
            + P  ++K   T + + +    T       +       S   F++N+LIR YS      
Sbjct: 47  QNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSK 106

Query: 120 VEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
             +   Y  +  +G+ P+KFTFPFVL  C    +   G  VHG +VK GF+ DV V N L
Sbjct: 107 SNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTL 166

Query: 180 INFYGECGDIVDG----RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI 235
           I+ Y   G+  DG     +VFD+  + + V+W+++I    R      AV LF EM   G+
Sbjct: 167 IHMYCCLGE--DGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGV 224

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
            P+ +TMV V+SACA L  LELG  V +Y+++  +  +  + NAL+DM+ KCG VD A +
Sbjct: 225 CPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIK 284

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           LF +   R +V   ++++     G   +A+++ DEM+ +G  PD V  +  +SA +  G 
Sbjct: 285 LFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGL 344

Query: 356 LLCGRMCHGYVLRN-----GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSW 409
           +  GR   G + RN      +E +      M+D+  + G  + A      M      + W
Sbjct: 345 VDKGRYYFGSMERNFSIVPKVEHY----GCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIW 400

Query: 410 NSLIAGLIKNGDVESAREVFSEM 432
            ++I      G+++    +  E+
Sbjct: 401 RTIITACHATGELKLGESISKEL 423


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/770 (32%), Positives = 404/770 (52%), Gaps = 50/770 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           +LT A++ FD     +    T+  + ++I  YS      +A  L+ E+   G  PD  T+
Sbjct: 89  NLTVARRIFD-----DTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTY 143

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L  C       E  Q H  IVK+G   +  V N L++ Y + G +   RR+F EM  
Sbjct: 144 ITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCG 203

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            + VS+  +I   A   L +EA+ LF EM   G KP+  T   VISA   L +   G ++
Sbjct: 204 WDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQI 263

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
             ++ +     N  + NA +D Y K   V+  ++LF E  + + V  N I++ Y  +G  
Sbjct: 264 HGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKV 323

Query: 322 REALAILDEMLL------HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           +E++ +  E+        + P P   TMLS  ++S    DL  GR  H  V+ +  +   
Sbjct: 324 KESIDLFQELQFTTFDRKNFPFP---TMLSIAASSL---DLQMGRQLHAQVVVSMADPDF 377

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + N+++DMY KCGK                                E A  +F  +  R
Sbjct: 378 RVSNSLVDMYAKCGK-------------------------------FEEADRIFLRLSSR 406

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
             + W  M+    Q  + E  ++LF  M    +  D+ T   V  A   L ++ L K ++
Sbjct: 407 STVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLH 466

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           + + ++G   ++    AL+DM+A C   + A++ F  M +R+V  W A + A A  G+G+
Sbjct: 467 SCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGK 525

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
             ++ F EM+  G +PDS+ F+ +LTACSH  LV +G   F  M+ ++ ++P+  HY  M
Sbjct: 526 GTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAM 585

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VD L R+G   EA  L+  MP EP++++W S+L +C+ H+N  +A  AA ++  +   + 
Sbjct: 586 VDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRD 645

Query: 676 GV-HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
              +V +SNI+A AG+W +V +V+  M+++G+RKLP  S +E+  KVH F++ D+ HP+ 
Sbjct: 646 AAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQ 705

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
             I   +  +  ++   GY PD++    +VD++ K   L +HSE+LA+AF LI+T +  P
Sbjct: 706 LEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSP 765

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           I V+KNLR C DCH+  K++SK+  REI VRD+NRFH FR GSCSC D+W
Sbjct: 766 ILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 185/437 (42%), Gaps = 56/437 (12%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC-HGYVLRNGLEGWDSICNTMIDMYMKCG 389
           M +  P P R   L  +  ++    L   + C    +++ G +   S  N MI    + G
Sbjct: 1   MKVKAPPPFRANQLKTLHGASSRQTL---QTCIDARIVKTGFDPITSRFNFMIKDLSERG 57

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
           +   A ++ D M N+   S + +I+G +K+G++  AR +F +   R  ++W TM+G  ++
Sbjct: 58  QLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSK 117

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY---AYIEKNGIHCD 506
            N F +A +LF  M     + D VT + + + C     L++AK +Y   A I K G H +
Sbjct: 118 SNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCN---DLEVAKELYQAHAQIVKLGHHLN 174

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
            ++   L+D + + G    A ++F  M   D  ++   I   A  G  E+A+ELF EM  
Sbjct: 175 HRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQN 234

Query: 567 QGIKPDSIVFVGVLTACS-----------HGGL------------------------VNQ 591
            G KP    F  V++A             HG +                        VN+
Sbjct: 235 LGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNE 294

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND---VIWGSLL 648
              LF  M ++ GVS     Y  ++      G + E++DL + +     D     + ++L
Sbjct: 295 VRKLFNEMPELDGVS-----YNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTML 349

Query: 649 AACQKHQNVDIAA--YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           +      ++ +    +A   ++  DP+   V   L ++YA  GK+    R+ L++  +  
Sbjct: 350 SIAASSLDLQMGRQLHAQVVVSMADPDFR-VSNSLVDMYAKCGKFEEADRIFLRLSSRST 408

Query: 707 RKLPGSSSIEVNGKVHE 723
                  S  V   +HE
Sbjct: 409 VPWTAMISANVQRGLHE 425


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/612 (37%), Positives = 355/612 (58%), Gaps = 41/612 (6%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P  ++   V      L  L+LG +V A++   G++  AL+ + +V  Y   G +D++  +
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F                     G+                  D  T    + +S +L  +
Sbjct: 128 FN--------------------GIG-----------------DYFTFPFVLKSSVELLSV 150

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G+  HG +LR GL+    +  ++I +Y KCG+   A ++FD+M+ + V SWN+L+AG 
Sbjct: 151 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 210

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER--IKVDRVT 474
            K+G +++A  +F  MP R+ +SW TM+ G +Q  + ++A+ LF  M+ E   ++ + VT
Sbjct: 211 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 270

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           ++ V  AC  L  L+  + I+    + G++ +  +  AL  M+A+CG    A   F ++ 
Sbjct: 271 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 330

Query: 535 K--RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           +  +++ AW   I A A  G+G QAV  F EM++ GI+PD I F G+L+ CSH GLV+ G
Sbjct: 331 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 390

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F  M+  + ++P++ HY C+ DLLGRAG L EA  L+  MP+     IWGSLLAAC+
Sbjct: 391 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 450

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
           KH+N+++A  AA ++  L+PE +G +VLLSN+YA AG+W  V ++R  +K QG +K PG 
Sbjct: 451 KHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGC 510

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           S IE+NGK H F  GD SHP+   I   L  +  +++ AGY PD + VL D+ E+EK++ 
Sbjct: 511 SWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFN 570

Query: 773 LSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHF 832
           L  HSEKLA+AFG+++T     +RV KNLR+C DCH+    +S++Y RE+IVRD NRFH 
Sbjct: 571 LIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHH 630

Query: 833 FRQGSCSCSDFW 844
           F+ G CSC D+W
Sbjct: 631 FKGGCCSCGDYW 642



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 185/378 (48%), Gaps = 57/378 (15%)

Query: 109 LIRGYSCIGL-GVEAISLYVE-------LAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
           L+RG     L G + ++ Y         ++ F  + D FTFPFVL +  +  +   G  V
Sbjct: 97  LLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFPFVLKSSVELLSVWMGKCV 156

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-------------------- 200
           HG I+++G   D++V   LI  YG+CG+I D  +VFD M+                    
Sbjct: 157 HGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCI 216

Query: 201 -----------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEE--GIKPNSVTMVCVIS 247
                       RN+VSWT++I   ++  L ++A+ LF EMV+E  G++PN VT++ V+ 
Sbjct: 217 DAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLP 276

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC--KDRNL 305
           ACA+L  LE G ++      +G+ +NA ++ AL  MY KCG++  A+  F +    ++NL
Sbjct: 277 ACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNL 336

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----R 360
           +  NT+++ Y   G   +A++   EM+  G +PD +T    +S  +  G +  G      
Sbjct: 337 IAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNH 396

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKN 419
           M   Y +   +E +  +     D+  + G+   A ++   M      S W SL+A   K+
Sbjct: 397 MSTTYSINPRVEHYACVA----DLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH 452

Query: 420 GDVE----SAREVFSEMP 433
            ++E    +AR++F   P
Sbjct: 453 RNLEMAETAARKLFVLEP 470



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 5/199 (2%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELA--GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           + ++I GYS  GL  +A+SL+ E+     G+ P+  T   VL AC + S    G Q+H  
Sbjct: 234 WTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHEL 293

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM--SERNVVSWTSLICACARRDLPK 221
             +MG + +  V   L   Y +CG +VD R  FD++  +E+N+++W ++I A A      
Sbjct: 294 ACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGL 353

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID-ELGMKANALMVNAL 280
           +AV  F EM++ GI+P+ +T   ++S C+    +++G +   ++     +         +
Sbjct: 354 QAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACV 413

Query: 281 VDMYMKCGAVDTAKQLFGE 299
            D+  + G +  A +L GE
Sbjct: 414 ADLLGRAGRLAEASKLVGE 432



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 10/177 (5%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           TL   +Q H    + GL    S +  +    A+ G   SL  A+  FD   K N     L
Sbjct: 283 TLERGRQIHELACRMGLNSNASVLIALTAMYAKCG---SLVDARNCFD---KLNRNEKNL 336

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
             +N++I  Y+  G G++A+S + E+   GI PD  TF  +L+ C+ S     G++    
Sbjct: 337 IAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNH 396

Query: 164 IVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMSERNVVS-WTSLICACARR 217
           +    +  +  VE+  C+ +  G  G + +  ++  EM      S W SL+ AC + 
Sbjct: 397 M-STTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH 452


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 278/848 (32%), Positives = 427/848 (50%), Gaps = 74/848 (8%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYI--SKVVCTCAQMGTFESLTYAQKAFD 91
           P+I S    +     +  H   L++ L H+PS    + ++   A+ G  ++      A  
Sbjct: 68  PAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATA 127

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP-DKFTFPFVLNACTK 150
             ++D  +      YNSLI           A+    ++   G      FT   VL AC+ 
Sbjct: 128 TELRDAVS------YNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181

Query: 151 ---SSAFGEGVQVHGAIVKMGF---DRDVFVENCLINFYGECGDIVDGRRVFDEMSER-- 202
                    G + H   +K GF    R+ F  N L++ Y   G + D + +F   +    
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFS 241

Query: 203 ----NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
               +VV+W ++I    +     EAV + ++MV  G++P+ VT    + AC++L+ L LG
Sbjct: 242 PGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALG 301

Query: 259 DRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNTIMSNY 315
             + A +  +  + AN+ + +ALVDMY     V +A+++F    +  R L + N ++  Y
Sbjct: 302 REMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGY 361

Query: 316 VRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
            + G+  EAL +   M    G  P   TM   + A A+          HGYV++ G+ G 
Sbjct: 362 AQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGN 421

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             + N ++DMY + G+ ++A                               R +F+ +  
Sbjct: 422 RFVQNALMDMYARLGEMDVA-------------------------------RRIFAMIDP 450

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVML----------------SERIKVDRVTMVGV 478
           RD +SWNT++ G   +    EA +L   M                 + R   + +T++ +
Sbjct: 451 RDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTL 510

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
              C  L A    K I+ Y  ++ +  D+ + +ALVDM+A+CG    +  VF R+ +R+V
Sbjct: 511 LPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNV 570

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
             W   I A  M G G++AV LF+EM   G   P+ + F+  L ACSH GLV++G  LF 
Sbjct: 571 ITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFH 630

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM-PVEPNDVIWGSLLAACQKHQN 656
            M   HGV P    + C+VD+LGRAG L EA  +I SM P E     W SLL AC+ H+N
Sbjct: 631 GMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRN 690

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
           V++   AAER+ EL+P ++  +VLL NIY++AG W     VR++M+ QG+ K PG S IE
Sbjct: 691 VELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIE 750

Query: 717 VNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHH 776
           ++G +H F +G+ SHP    + + +  +  R+R  GY PD + VL DVDE EK  +L +H
Sbjct: 751 LDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYH 810

Query: 777 SEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           SEKLA+AFGL+       IRV KNLR+C DCH  AK +SK+  R+I++RD  RFH FR G
Sbjct: 811 SEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDG 870

Query: 837 SCSCSDFW 844
           SCSC D+W
Sbjct: 871 SCSCGDYW 878



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 230/555 (41%), Gaps = 70/555 (12%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF--DRDVFVENCLINFYGECGDIVDGRR 194
           D F  P  + +            +H A ++          V N L+  Y  CGD+     
Sbjct: 62  DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121

Query: 195 VFDEMSE--RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP-NSVTMVCVISACAK 251
           +F   +   R+ VS+ SLI A       + A+    +M+ EG    +S T+V V+ AC+ 
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181

Query: 252 L---QNLELGDRVCAYIDELGM---KANALMVNALVDMYMKCGAVDTAKQLFGECKDR-- 303
           L       LG    A+  + G           NAL+ MY + G VD A+ LF        
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFS 241

Query: 304 ----NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
               ++V  NT++S  V+ G   EA+ +L +M+  G RPD VT  SA+ A ++L  L  G
Sbjct: 242 PGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALG 301

Query: 360 RMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHM--SNKTVVSWNSLIAGL 416
           R  H  VL++  L     + + ++DMY    K   A R+FD +   ++ +  WN++I G 
Sbjct: 302 REMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGY 361

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTM 475
            + G                               M EEA+ELF  M +E        TM
Sbjct: 362 AQAG-------------------------------MDEEALELFSRMEAEAGCAPSETTM 390

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
            GV  AC         + ++ Y+ K G+  +  +  AL+DM+AR G+   A ++F  ++ 
Sbjct: 391 SGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDP 450

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEM------------LRQG----IKPDSIVFVGV 579
           RDV +W   I    ++G+  +A +L  EM              +G      P++I  + +
Sbjct: 451 RDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTL 510

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L  C+      +G  +       H +   I     +VD+  + G L  +  +   +P   
Sbjct: 511 LPGCAALAAPARGKEI-HGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLP-RR 568

Query: 640 NDVIWGSLLAACQKH 654
           N + W  L+ A   H
Sbjct: 569 NVITWNVLIMAYGMH 583


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/704 (36%), Positives = 377/704 (53%), Gaps = 34/704 (4%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-- 201
           +LN   ++ +     Q+H  I+   +    F+ N LIN Y +CG +     +F       
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           + +V+WTSLI   +  ++  +A+ LF +M   G  PN  T   ++SA A    +  G ++
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            + I + G  AN  +  ALVDMY KC  + +A ++F +  +RNLV  N+++  +    L 
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327

Query: 322 REALAILDEMLLHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             A+ +  ++L      P+ V++ S +SA A +G L  GR  HG V++ GL     + N+
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++DMY KC       R FD                           ++F  +  RD ++W
Sbjct: 388 LMDMYFKC-------RFFD------------------------EGVKLFQCVGDRDVVTW 416

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N ++ G  Q + FEEA   F VM  E I  D  +   V  +   L AL     I+  I K
Sbjct: 417 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK 476

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
            G   +M +  +L+ M+A+CG    A QVF  +E  +V +WTA I A  + G   Q +EL
Sbjct: 477 LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIEL 536

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F  ML +GI+P  + FV VL+ACSH G V +G   F SM  IH ++P   HY CMVDLLG
Sbjct: 537 FEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLG 596

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAG L EA   I+SMP++P   +WG+LL AC+K+ N+ +   AAER+ E++P   G +VL
Sbjct: 597 RAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVL 656

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           L+N+   +G+      VR  M   G+RK PG S I+V      FT+ D SH   + I  M
Sbjct: 657 LANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKM 716

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           L ++   ++  GYV +   V   ++E E++  L +HSEKLA+AFGL++     PIR+ KN
Sbjct: 717 LEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKN 776

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR C  CH+  KL SK++DREIIVRD NRFH F  G CSC D+W
Sbjct: 777 LRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 258/575 (44%), Gaps = 54/575 (9%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           ++L    Q H  I+       P   + ++   A+ G             ++ K      T
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFK------T 209

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +  + SLI   S   + ++A+SL+ ++   G  P++FTF  +L+A   +     G Q+H 
Sbjct: 210 IVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHS 269

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            I K GFD ++FV   L++ Y +C D+    RVFD+M ERN+VSW S+I      +L   
Sbjct: 270 LIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDR 329

Query: 223 AVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           AV +F +++ E+ + PN V++  V+SACA +  L  G +V   + + G+     ++N+L+
Sbjct: 330 AVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLM 389

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY KC   D   +LF    DR++V  N ++  +V+     EA      M   G  PD  
Sbjct: 390 DMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEA 449

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           +  + + +SA L  L  G   H  +++ G      I  ++I MY KCG            
Sbjct: 450 SFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCG------------ 497

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                    SL+           A +VF  +   + ISW  M+          + +ELF 
Sbjct: 498 ---------SLV----------DAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFE 538

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM----QLATALVDMF 517
            MLSE I+   VT V V SAC + G ++     +  ++K  IH DM    +    +VD+ 
Sbjct: 539 HMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKK--IH-DMNPGPEHYACMVDLL 595

Query: 518 ARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEMLRQGIKPDS 573
            R G    A +    M  K   S W A +GA    GN   G +A E   EM  +   P +
Sbjct: 596 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM--EPYNPGN 653

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
            V +  +  C+  G + +   + R +  ++GV  +
Sbjct: 654 YVLLANM--CTRSGRLEEANEV-RRLMGVNGVRKE 685


>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/603 (38%), Positives = 356/603 (59%), Gaps = 22/603 (3%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++    K  NL    +V A +   G+      ++ L++   K  +   A  +F    +  
Sbjct: 8   ILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAST-YAFTIFNHIPNPT 66

Query: 305 LVLCNTIMSNYVRLG-LAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMC 362
           L L NT++S+          A ++ + +L H   +P+  T  S   A A    L  G   
Sbjct: 67  LFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPL 126

Query: 363 HGYVLRNGLEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
           H +VL+     +D  + N++++ Y K GK  ++  +FD +S   + +WN+++A   ++  
Sbjct: 127 HAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSAS 186

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
                          H+S++T        +M  EA+ LF  M   +IK + VT+V + SA
Sbjct: 187 ---------------HVSYST---SFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISA 228

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  LGAL    W + Y+ +N +  +  + TALVDM+++CG    A Q+F  +  RD   +
Sbjct: 229 CSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCY 288

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            A IG  A+ G+G QA+EL+  M  + + PD    V  + ACSHGGLV +G  +F SM  
Sbjct: 289 NAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKG 348

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
           +HG+ P++ HYGC++DLLGRAG L EA + ++ MP++PN ++W SLL A + H N+++  
Sbjct: 349 VHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGE 408

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
            A + + EL+PE SG +VLLSN+YAS G+W +V RVR+ MK+ G+ KLPG S +E+NG +
Sbjct: 409 AALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAM 468

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           HEF +GD++HP    I S + E+N RL + G+ P  + VL DV+E++K+  LS+HSE+LA
Sbjct: 469 HEFLTGDKAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLA 528

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +AF LI++S +MPIR++KNLR+C DCH+  KL+S  Y R+IIVRD NRFH F+ GSCSC 
Sbjct: 529 IAFALIASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCL 588

Query: 842 DFW 844
           D+W
Sbjct: 589 DYW 591



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 201/421 (47%), Gaps = 49/421 (11%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           + P +  L+ C  LN LKQ H  +L  GL  +  Y+S ++ T ++  +    TYA   F+
Sbjct: 5   NHPILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAS----TYAFTIFN 60

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGIL-PDKFTFPFVLNACT 149
           +       + TLF+YN+LI   +     +  A SLY  +     L P+ FTFP +  AC 
Sbjct: 61  HI-----PNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACA 115

Query: 150 KSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
                  G  +H  ++K +    D FV+N L+NFY + G +   R +FD++SE ++ +W 
Sbjct: 116 SHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWN 175

Query: 209 SLICACARR-------------DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           +++ A A+              D+  EA++LF +M    IKPN VT+V +ISAC+ L  L
Sbjct: 176 TMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGAL 235

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
             G     Y+    +K N  +  ALVDMY KCG ++ A QLF E  DR+    N ++  +
Sbjct: 236 SQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGF 295

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
              G   +AL +   M L    PD  T++  + A +           HG ++  GLE ++
Sbjct: 296 AVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACS-----------HGGLVEEGLEIFE 344

Query: 376 SICNT------------MIDMYMKCGK-QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           S+               +ID+  + G+ +E   R+ D       + W SL+     +G++
Sbjct: 345 SMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNL 404

Query: 423 E 423
           E
Sbjct: 405 E 405



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 193/430 (44%), Gaps = 59/430 (13%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           QVH  ++  G     +  + L+N   +         +F+ +    +  + +LI +     
Sbjct: 23  QVHAQMLTTGLSFQTYYLSHLLNTSSKFASTY-AFTIFNHIPNPTLFLYNTLISSLTHHS 81

Query: 219 LPKEAVYLFFEM-----VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKA 272
              + ++L F +       + ++PNS T   +  ACA    L+ G  + A++ + L    
Sbjct: 82  ---DQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPY 138

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG------------- 319
           +  + N+L++ Y K G +  ++ LF +  + +L   NT+++ Y +               
Sbjct: 139 DPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDAD 198

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           ++ EAL +  +M L   +P+ VT+++ +SA + LG L  G   HGYVLRN L+    +  
Sbjct: 199 MSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGT 258

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++DMY KCG   +AC++FD +S++    +N++I G   +G                   
Sbjct: 259 ALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHG----------------- 301

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                          +A+EL+R M  E +  D  T+V    AC + G ++    I+  ++
Sbjct: 302 --------------NQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMK 347

Query: 500 K-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---G 554
             +G+   ++    L+D+  R G  + A +  + M  K +   W + +GA  + GN   G
Sbjct: 348 GVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMG 407

Query: 555 EQAVELFNEM 564
           E A++   E+
Sbjct: 408 EAALKHLIEL 417


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/631 (37%), Positives = 362/631 (57%), Gaps = 37/631 (5%)

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           C +RDLP+ A+     +   G+  +S T   +I  C   + +  G+ +C ++   G +  
Sbjct: 37  CYQRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +VN L++MY+K   ++ A QLF +   RN++   T++S Y +  + ++AL +L  ML 
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
              RP+  T  S + +   + D+   RM H  +++ GLE    + + +ID++ K G+ E 
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE- 211

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                                          A  VF EM   D I WN+++GG  Q +  
Sbjct: 212 ------------------------------DALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           + A+ELF+ M       ++ T+  V  AC  L  L+L    + +I K     D+ L  AL
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNAL 299

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VDM+ +CG  + A++VF +M++RDV  W+  I  +A  G  ++A++LF  M   G KP+ 
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I  VGVL ACSH GL+  GW+ FRSM  ++G+ P   HYGCM+DLLG+AG L +A+ L+ 
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
            M  EP+ V W +LL AC+  +N+ +A YAA+++  LDPE +G + LLSNIYA++ KW +
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           V  +R +M+++GI+K PG S IEVN ++H F  GD SHP++  +S  L ++  RL   GY
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VP+   VL D++ ++ +  L HHSEKLA+AFGL++      IR+ KNLR+C DCH F KL
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            SK+  R I++RD  R+H F+ G CSC D+W
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 208/430 (48%), Gaps = 44/430 (10%)

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           L   G+  D  T+  ++  C  + A  EG  +   +   G    +F+ N LIN Y +   
Sbjct: 52  LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + D  ++FD+M +RNV+SWT++I A ++  + ++A+ L   M+ + ++PN  T   V+ +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C  + ++ +    C  I E G++++  + +AL+D++ K G  + A  +F E    + ++ 
Sbjct: 172 CNGMSDVRMLH--CGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N+I+  + +   +  AL +   M   G   ++ T+ S + A   L  L  G   H ++++
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288

Query: 369 NGLEGWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
                +D    + N ++DMY KCG  E A R+F+ M  + V++W+++I+GL +NG     
Sbjct: 289 -----YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG----- 338

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                       +EA++LF  M S   K + +T+VGV  AC + 
Sbjct: 339 --------------------------YSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372

Query: 486 GALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTA 543
           G L+   + +  ++K  GI    +    ++D+  + G    A+++   ME + D   W  
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432

Query: 544 AIGAMAMEGN 553
            +GA  ++ N
Sbjct: 433 LLGACRVQRN 442



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 171/342 (50%), Gaps = 20/342 (5%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  L  A + FD   + N  S T     ++I  YS   +  +A+ L V +    + P+ +
Sbjct: 109 FNLLNDAHQLFDQMPQRNVISWT-----TMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  VL +C   +   +   +H  I+K G + DVFV + LI+ + + G+  D   VFDEM
Sbjct: 164 TYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              + + W S+I   A+      A+ LF  M   G      T+  V+ AC  L  LELG 
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG- 279

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            + A++  +    + ++ NALVDMY KCG+++ A ++F + K+R+++  +T++S   + G
Sbjct: 280 -MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSI 377
            ++EAL + + M   G +P+ +T++  + A +  G L  G     Y  R+   L G D +
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG----WYYFRSMKKLYGIDPV 394

Query: 378 ---CNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
                 MID+  K GK + A ++ + M      V+W +L+  
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 135/262 (51%), Gaps = 11/262 (4%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L++C  +++++  HC I+K+GL       S V    A +  F  L   + A   +  D  
Sbjct: 169 LRSCNGMSDVRMLHCGIIKEGLE------SDVFVRSALIDVFAKLGEPEDALSVF--DEM 220

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            +    ++NS+I G++       A+ L+  +   G + ++ T   VL ACT  +    G+
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q H  IVK  +D+D+ + N L++ Y +CG + D  RVF++M ER+V++W+++I   A+  
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMV 277
             +EA+ LF  M   G KPN +T+V V+ AC+    LE G      + +L G+       
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398

Query: 278 NALVDMYMKCGAVDTAKQLFGE 299
             ++D+  K G +D A +L  E
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNE 420


>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/472 (46%), Positives = 311/472 (65%)

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD  T  S + A   L DL  GR+ HG V + G      + N ++ +Y  CG+   A  +
Sbjct: 126 PDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLL 185

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F+ M  + VV+WN +IA LIK GD E A ++FS MP R+  SW +M+ G  Q    +EA+
Sbjct: 186 FEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAI 245

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF  M    +K + VT+V V +AC  LGALDL   I+ Y  ++G   +++++  L+DM+
Sbjct: 246 HLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMY 305

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            +CG  + A +VF  ME+R V +W+A IG +AM G  E+A+ LF++M + GI+P+ + F+
Sbjct: 306 VKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFI 365

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           G+L ACSH GL+++G   F SMT  +G+ PQI HYGCMVDLL RAGLL EA + I +MP+
Sbjct: 366 GLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPM 425

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           +PN V+WG+LL AC+ H+NV++A  A + + ELDP   G +V+LSNIYA AG+W + ARV
Sbjct: 426 KPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARV 485

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  MK++ ++K PG SSI V+G VHEF +G+ESHP+   I     E+   +R  GYVP+ 
Sbjct: 486 RKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNT 545

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
           + VLLD++E EK   +S HSEKLA+ FGL++T    PIR++KNLR+C DCHS
Sbjct: 546 SVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHS 597



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 216/465 (46%), Gaps = 43/465 (9%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           M   L+  P+    P        H  K    ++  I  L+N  +  EL+Q H  I+K   
Sbjct: 1   MLFALSSFPI----PQSPNRNQIHHVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNA 56

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
                 +++V   CA   +F    YAQ+ F+   K    +   F++NS ++  +     +
Sbjct: 57  PLSILPLTRVGLVCAFTPSFH---YAQQIFECVEKQKPET---FVWNSCLKALAEGDSPI 110

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +AI L+  L  + + PD FT   VL AC        G  +HG + K+GF  +++++N ++
Sbjct: 111 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIV 170

Query: 181 NFYGECGDIVDGRRVFDEMS-------------------------------ERNVVSWTS 209
           + Y  CG++ + R +F++M                                ERNV SWTS
Sbjct: 171 HLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTS 230

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I    +    KEA++LF +M E G+K N VT+V V++ACA L  L+LG R+  Y +  G
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
            K N  + N L+DMY+KCG ++ A ++F E ++R +V  + ++      G A EAL +  
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKC 388
           +M   G  P+ VT +  + A + +G +  GR     + R+ G+         M+D+  + 
Sbjct: 351 DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRA 410

Query: 389 GKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNGDVESAREVFSEM 432
           G    A     +M  K   V W +L+     + +VE A E    +
Sbjct: 411 GLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL 455



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 35/286 (12%)

Query: 425 AREVFS--EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           A+++F   E    +   WN+ L  L + +   +A+ LF  +    +  D  T   V  AC
Sbjct: 79  AQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             L  L   + ++  +EK G   ++ L   +V ++A CG+   A  +F +M +RDV  W 
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198

Query: 543 AAIGAMAMEGNGE-------------------------------QAVELFNEMLRQGIKP 571
             I  +  +G+ E                               +A+ LF +M   G+K 
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
           + +  V VL AC+  G ++ G  +    ++ HG    +     ++D+  + G L EA  +
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRI-HEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKV 317

Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
            + M  E   V W +++     H   + A      ++++  E +GV
Sbjct: 318 FEEME-ERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGV 362



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 11/186 (5%)

Query: 526 AMQVFRRMEKR--DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           A Q+F  +EK+  +   W + + A+A   +   A+ LF  + +  + PD+     VL AC
Sbjct: 79  AQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
            +   ++ G  +   + +  G    +     +V L    G +GEA  L + MP + + V 
Sbjct: 139 LNLLDLSNG-RILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMP-QRDVVT 196

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI--YASAGKWTNVARVRLQM 701
           W  ++A   K  + + A     R+    PE++ V    S I  Y   GK      +  +M
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSRM----PERN-VRSWTSMIAGYVQCGKAKEAIHLFAKM 251

Query: 702 KEQGIR 707
           +E G++
Sbjct: 252 EEAGVK 257


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/585 (39%), Positives = 341/585 (58%), Gaps = 32/585 (5%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           +V A++   G   + ++ N L+  Y +  A+D A  LF     R+    + ++  + + G
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAG 80

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
                 A   E+L  G  PD  T+   +       DL  GR+ H  VL++GL     +C 
Sbjct: 81  DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCA 140

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +++DMY KC                 +V              VE A+ +F  M  +D ++
Sbjct: 141 SLVDMYAKC-----------------IV--------------VEDAQRLFERMLSKDLVT 169

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           W  M+G     N +E ++ LF  M  E +  D+V MV V +AC  LGA+  A++   YI 
Sbjct: 170 WTVMIGAYADCNAYE-SLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIV 228

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           +NG   D+ L TA++DM+A+CG  + A +VF RM++++V +W+A I A    G G+ A++
Sbjct: 229 RNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAID 288

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF+ ML   I P+ + FV +L ACSH GL+ +G   F SM + H V P + HY CMVDLL
Sbjct: 289 LFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLL 348

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L EAL LI++M VE ++ +W +LL AC+ H  +++A  AA  + EL P+  G +V
Sbjct: 349 GRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYV 408

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSNIYA AGKW  VA+ R  M ++ ++K+PG + IEV+ K ++F+ GD SHP+   I  
Sbjct: 409 LLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYE 468

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           ML  +  +L  AGYVPD   VL DV+E+ K+ +L  HSEKLA+AFGLI+  +  PIR+ K
Sbjct: 469 MLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISK 528

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+F+K+VS +  R IIVRD NRFH F  G+CSC D+W
Sbjct: 529 NLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 219/446 (49%), Gaps = 33/446 (7%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD-YYI 94
           I  L  C+ +  ++Q H H++  G        +K++ T AQ    +    A   FD   +
Sbjct: 7   IDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDD---AYSLFDGLTM 63

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
           +D++T      ++ ++ G++  G      + + EL   G+ PD +T PFV+  C   +  
Sbjct: 64  RDSKT------WSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDL 117

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  +H  ++K G   D FV   L++ Y +C  + D +R+F+ M  +++V+WT +I A 
Sbjct: 118 QIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAY 177

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A  +   E++ LF  M EEG+ P+ V MV V++ACAKL  +        YI   G   + 
Sbjct: 178 ADCN-AYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDV 236

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           ++  A++DMY KCG+V++A+++F   K++N++  + +++ Y   G  ++A+ +   ML  
Sbjct: 237 ILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSC 296

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
              P+RVT +S + A +  G +  G      M   + +R  ++ +      M+D+  + G
Sbjct: 297 AILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHY----TCMVDLLGRAG 352

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAR-------EVFSEMPGRDHISWN 441
           + + A R+ + M+  K    W++L+     +  +E A        E+  + PG       
Sbjct: 353 RLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGH-----Y 407

Query: 442 TMLGGLTQENMFEEAMELFRVMLSER 467
            +L  +  +    E +  FR M+++R
Sbjct: 408 VLLSNIYAKAGKWEKVAKFRDMMTQR 433


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/772 (33%), Positives = 413/772 (53%), Gaps = 52/772 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           S+++A++AFD  +  N  S     ++++I  Y+  G   +A+ L+V +   G+  +  TF
Sbjct: 92  SVSHARRAFDAMVVRNVVS-----WSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITF 146

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
             VL+AC    A   G  +H  IV  G    DV + N ++N YG+CG++   R VF+ M 
Sbjct: 147 VSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERME 206

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            +N V+W ++I AC+R D  KEA  L  EM  +G++PN +T+V VI ACA +Q++  G  
Sbjct: 207 AKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRI 266

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V   +   G++++  + NALV++Y KCG +  A+      + R+ +   T+++ Y R G 
Sbjct: 267 VHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGH 326

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            + A+A++  M   G + D  T ++ + +   +  L  G   H  +  +G+E    +   
Sbjct: 327 GKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTA 386

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++DMY KCG  + A R FD MS+                               RD   W
Sbjct: 387 LVDMYGKCGNPDAARRAFDRMSDV------------------------------RDVTVW 416

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N +L      +  +E + +F  M  + +  D VT + +  AC  L AL L +  ++ + +
Sbjct: 417 NALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLE 476

Query: 501 NGIHCDMQ-------LATALVDMFARCGDPQRAMQVF---RRMEKRDVSAWTAAIGAMAM 550
            G+  D Q       L T++++M+A+CG    A   F   RR    DV AW+A + A + 
Sbjct: 477 RGLF-DRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQ 535

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G  E+A+  F  M ++G+KPDS+ FV  +  CSH GLV +    F S+   HG++P   
Sbjct: 536 FGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEA 595

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           H+ C+VDLL RAG + EA  L++  P+  +   W +LL+AC+ + +++ A   A R+  L
Sbjct: 596 HFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASL 655

Query: 671 DPEKSG-VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
              +SG  + LL++++  + KW +V   R  + E+G    PG S IE+N +V+EF +GD+
Sbjct: 656 ---RSGSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDD 712

Query: 730 S-HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
              P    I + L  +   +R AGY  D    + D  EQEKK+LLS+HSEK+A+ FGLIS
Sbjct: 713 RLLPREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLIS 772

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           T +  P+R+VKN+ +C DCH   K +S+V DR I +RD+  FH F  GSCSC
Sbjct: 773 TPEGTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSC 824



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/557 (29%), Positives = 286/557 (51%), Gaps = 41/557 (7%)

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F +N  I  Y+  G    A+ ++  +A  G+ PD+ +   +L+A        +G   H  
Sbjct: 7   FSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRT 66

Query: 164 IVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
           + +  G   DV V   ++  Y  CG +   RR FD M  RNVVSW+++I A A+R  P +
Sbjct: 67  VCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGD 126

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NALV 281
           A+ LF  M  EG+K N++T V V+ ACA ++ + LG  +   I   G+  + +++ N +V
Sbjct: 127 ALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIV 186

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           +MY KCG VD A+++F   + +N V  NT+++   R    +EA A+L EM L G RP+++
Sbjct: 187 NMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKI 246

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T++S + A A +  ++ GR+ H  V   GLE  +++ N ++++Y KCGK   A    + +
Sbjct: 247 TLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGI 306

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             +  +SW +L+A   ++G  + A  V   M   DH                        
Sbjct: 307 ETRDKISWTTLLAAYARHGHGKRAIAVIKRM---DH------------------------ 339

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
               E +K+D  T V +  +C  + AL L + I+  + ++GI  D  L TALVDM+ +CG
Sbjct: 340 ----EGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCG 395

Query: 522 DPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           +P  A + F RM + RDV+ W A + A  +   G++ + +F  M  QG+ PD++ F+ +L
Sbjct: 396 NPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSIL 455

Query: 581 TACSH-----GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA-LDLIKS 634
            AC+       G +     L R + D   V+   +    ++++  + G L +A  +  K+
Sbjct: 456 DACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKA 515

Query: 635 MPVEPNDVI-WGSLLAA 650
                +DV+ W +++AA
Sbjct: 516 RRARASDVVAWSAMVAA 532



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 221/457 (48%), Gaps = 40/457 (8%)

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M++R+  SW   I   AR      A+ +F  M  EG+ P+ V+ + ++ A A L +L  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 259 D----RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           +     VC   +  G+ ++ ++  A++ MY +CG+V  A++ F     RN+V  + +++ 
Sbjct: 61  EFFHRTVC---EASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAA 117

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y + G   +AL +   M   G + + +T +S + A A +  +  G+  H  ++ +GL G 
Sbjct: 118 YAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGD 177

Query: 375 DSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
           D I  NT+++MY KCG+ ++A  +F+ M  K  V+WN                       
Sbjct: 178 DVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWN----------------------- 214

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                   TM+   ++ + ++EA  L   M  + ++ +++T+V V  AC ++ ++   + 
Sbjct: 215 --------TMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRI 266

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++  +   G+  D  +A ALV+++ +CG  + A      +E RD  +WT  + A A  G+
Sbjct: 267 VHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGH 326

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
           G++A+ +   M  +G+K DS  FV +L +C     +  G  +   + +  G+    V   
Sbjct: 327 GKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAE-SGIELDPVLQT 385

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            +VD+ G+ G    A      M    +  +W +LLAA
Sbjct: 386 ALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAA 422



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 163/356 (45%), Gaps = 37/356 (10%)

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           DR+    N  ++ Y R G    AL I   M L G  PDRV+ ++ + A A LGDL  G  
Sbjct: 3   DRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEF 62

Query: 362 CHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
            H  V      G D +  T ++ MY +CG    A R FD M  + VVSW+++IA   + G
Sbjct: 63  FHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRG 122

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
                       PG                    +A+ELF  M  E +K + +T V V  
Sbjct: 123 H-----------PG--------------------DALELFVRMDHEGVKANAITFVSVLD 151

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           AC  + A+ L K I+  I  +G+   D+ L   +V+M+ +CG+   A +VF RME ++  
Sbjct: 152 ACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAV 211

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
            W   I A +     ++A  L  EM   G++P+ I  V V+ AC+    + +G  +   +
Sbjct: 212 TWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRG-RIVHEI 270

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKH 654
               G+         +V+L G+ G L  A   ++   +E  D I W +LLAA  +H
Sbjct: 271 VAGEGLESDNTVANALVNLYGKCGKLRAARHALEG--IETRDKISWTTLLAAYARH 324


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/772 (33%), Positives = 413/772 (53%), Gaps = 52/772 (6%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           S+ +A++AFD  +  N  S     ++++I  Y+  G   +A+ L+V +   G+  +  TF
Sbjct: 7   SVIHARRAFDAMVVRNVVS-----WSAMIAAYAQRGHPADALELFVRMDHEGVKANAITF 61

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
             VL+AC    A   G  +H  IV  G    DV + N ++N YG+CG++   R VF+ M 
Sbjct: 62  VSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERME 121

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            +N V+W ++I AC+R D  KEA  L  EM  +G++PN +T+V VI ACA +Q++  G  
Sbjct: 122 AKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRI 181

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V   +   G++++  + NALV++Y KCG +  A+      + R+ +   T+++ Y R G 
Sbjct: 182 VHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGH 241

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            + A+A++  M   G + D  T ++ + +   +  L  G   H  +  +G+E    +   
Sbjct: 242 GKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTA 301

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++DMY KCG  + A R FD M                        R+V      RD   W
Sbjct: 302 LVDMYGKCGNPDAARRAFDRM------------------------RDV------RDVTVW 331

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N +L      +  +E + +F  M  + +  D VT + +  AC  L AL L +  ++ + +
Sbjct: 332 NALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLE 391

Query: 501 NGIHCDMQ-------LATALVDMFARCGDPQRAMQVF---RRMEKRDVSAWTAAIGAMAM 550
            G+  D Q       L T++++M+A+CG    A   F   RR    DV AW+A + A + 
Sbjct: 392 RGLF-DRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQ 450

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G  E+A+  F  M ++G+KPDS+ FV  +  CSH GLV +    F S+   HG++P   
Sbjct: 451 FGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEA 510

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           H+ C+VDLL RAG + EA  L++  P+  +   W +LL+AC+ + +++ A   A R+  L
Sbjct: 511 HFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASL 570

Query: 671 DPEKSG-VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
              +SG  + LL++++  + KW +V   R  + E+G    PG S IE+N +V+EF +GD+
Sbjct: 571 ---RSGSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDD 627

Query: 730 S-HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
              P    I + L  +   +R AGY  D    + D  EQEKK+LLS+HSEK+A+ FGLIS
Sbjct: 628 RLLPREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLIS 687

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           T +  P+R+VKN+ +C DCH   K +S+V DR I +RD+  FH F  GSCSC
Sbjct: 688 TPEGTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSC 739



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 250/477 (52%), Gaps = 40/477 (8%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y  CG ++  RR FD M  RNVVSW+++I A A+R  P +A+ LF  M  EG+K N++T 
Sbjct: 2   YNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITF 61

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECK 301
           V V+ ACA L  + LG  +   I   G+  + +++ N +V+MY KCG VD A+++F   +
Sbjct: 62  VSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERME 121

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
            +N V  NT+++   R    +EA A+L EM L G RP+++T++S + A A +  +  GR+
Sbjct: 122 AKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRI 181

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            H  V   GLE  +++ N ++++Y KCGK   A    + +  +  +SW +L+A   ++G 
Sbjct: 182 VHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGH 241

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
            + A  V   M   DH                            E +K+D  T V +  +
Sbjct: 242 GKRAIAVIKRM---DH----------------------------EGVKLDSFTFVNLLES 270

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK-RDVSA 540
           C  + AL L + I+  + ++GI  D  L TALVDM+ +CG+P  A + F RM   RDV+ 
Sbjct: 271 CVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTV 330

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH-----GGLVNQGWHL 595
           W A + A  +   G++ + +F  M  QG+ PD++ F+ +L AC+       G +     L
Sbjct: 331 WNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRML 390

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA-LDLIKSMPVEPNDVI-WGSLLAA 650
            R + D   V+   +    ++++  + G L +A  +  K+     +DV+ W +++AA
Sbjct: 391 ERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAA 447



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 178/369 (48%), Gaps = 33/369 (8%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY +CG+V  A++ F     RN+V  + +++ Y + G   +AL +   M   G + + +T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHM 401
            +S + A A LG +  G+  H  ++ +GL G D I  NT+++MY KCG+ ++A  +F+ M
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             K  V+WN                               TM+   ++ + ++EA  L  
Sbjct: 121 EAKNTVTWN-------------------------------TMIAACSRHDRYKEAFALLG 149

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M  + ++ +++T+V V  AC ++ ++   + ++  +   G+  D  +A ALV+++ +CG
Sbjct: 150 EMDLDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCG 209

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             + A      +E RD  +WT  + A A  G+G++A+ +   M  +G+K DS  FV +L 
Sbjct: 210 KLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLE 269

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           +C     +  G  +   + +  G+    V    +VD+ G+ G    A      M    + 
Sbjct: 270 SCVAIAALALGEEIHDRLAE-SGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDV 328

Query: 642 VIWGSLLAA 650
            +W +LLAA
Sbjct: 329 TVWNALLAA 337



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ RCG    A + F  M  R+V +W+A I A A  G+   A+ELF  M  +G+K ++I 
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FV VL AC+  G +  G  +   +     +   ++    +V++ G+ G +  A ++ + M
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 636 PVEPNDVIWGSLLAACQKH 654
             + N V W +++AAC +H
Sbjct: 121 EAK-NTVTWNTMIAACSRH 138


>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 582

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/524 (42%), Positives = 317/524 (60%), Gaps = 3/524 (0%)

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL + D +L  G  PD +    A++  A+          HG+  + G      + N +I 
Sbjct: 59  ALRLFDHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNGLIH 118

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
            Y  CG    A ++FDH     +++WN L+ G  +  D  + RE F++MP RD +SWNT+
Sbjct: 119 AYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWNTV 178

Query: 444 LGGLTQENMFEEAMELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           +         EEA+ +FR ML S   + DRVT+V V SA  YLGAL    W +AY+ +  
Sbjct: 179 IAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCRKE 238

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           I  D +L++AL++M+++CG  + A+ VF      R V  W A +      G  E+A+ELF
Sbjct: 239 IEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGCSERALELF 298

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
             M   G  P+ I F  +L ACSHGG V +G   F  MT+   + P I HYGCMVDL  R
Sbjct: 299 TRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMVDLFCR 358

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AGL  +A ++I+ MP+EP+  +W +L+ AC+ + N ++   A  R+ E  P     +VLL
Sbjct: 359 AGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPNDHAGYVLL 418

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIYA  G W  V +VR  M   G++K+PGSSSIE++G +HEF SGD+SH    ++  ML
Sbjct: 419 SNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFISGDKSHSRKRDVYEML 478

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
            E+  +L+ AGY PD + VLLD+D+++ K+  L+ HSE+LA+AFGLIST+   PIR+VKN
Sbjct: 479 SEICQQLKVAGYAPDTSQVLLDIDDEDVKESSLALHSERLALAFGLISTAPGTPIRIVKN 538

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH+  KL+SK+Y R I+VRD NRFH FR+GSCSC D+W
Sbjct: 539 LRVCGDCHNAIKLLSKIYGRCIMVRDANRFHRFREGSCSCGDYW 582



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 160/374 (42%), Gaps = 72/374 (19%)

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
           P  A+ LF  ++  G  P+ +     ++ CA+ +      ++  +  + G  ++  + N 
Sbjct: 56  PHLALRLFDHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNG 115

Query: 280 LVDMYMKCGAV-----------------------------DTA--KQLFGECKDRNLVLC 308
           L+  Y  CG +                             DT   ++ F +   R+ V  
Sbjct: 116 LIHAYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSW 175

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
           NT+++  V  G   EA+A+  EML     +PDRVT++S +SA A LG L  G   H YV 
Sbjct: 176 NTVIAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVC 235

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM-SNKTVVSWNSLIAGLIKNGDVESAR 426
           R  +E  + + + +I+MY KCG  E A  +F++  + ++V +WN+++AG   +G  E A 
Sbjct: 236 RKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGCSERAL 295

Query: 427 EVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           E+F+ M       + I++NT+L   +     EE +  F  M +                 
Sbjct: 296 ELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTN----------------- 338

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
                             + I  D+     +VD+F R G  ++A ++ + M  + D + W
Sbjct: 339 -----------------SSSIEPDIAHYGCMVDLFCRAGLFEKAEEMIQMMPMEPDAAVW 381

Query: 542 TAAIGAMAMEGNGE 555
            A +GA     N E
Sbjct: 382 KALVGACRTYSNFE 395



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 143/340 (42%), Gaps = 57/340 (16%)

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A+ L+  L   G  PD   +   L  C +  A+    Q+HG   K G      V N LI+
Sbjct: 59  ALRLFDHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNGLIH 118

Query: 182 FYGECGDIVDGRRVFD-------------------------------EMSERNVVSWTSL 210
            Y  CG + D R+VFD                               +M  R+ VSW ++
Sbjct: 119 AYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWNTV 178

Query: 211 ICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           I  C      +EAV +F EM+     +P+ VT+V VISA A L  L  G    AY+    
Sbjct: 179 IAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCRKE 238

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           ++ +  + +AL++MY KCG ++ A  +F   C  R++   N +++ +   G +  AL + 
Sbjct: 239 IEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGCSERALELF 298

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-------- 380
             M   G  P+++T  + ++A +           HG  +  G+  ++ + N+        
Sbjct: 299 TRMESSGFVPNKITFNTLLNACS-----------HGGFVEEGIGYFERMTNSSSIEPDIA 347

Query: 381 ----MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
               M+D++ + G  E A  +   M        W +L+  
Sbjct: 348 HYGCMVDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGA 387



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+++ G++  G    A+ L+  +   G +P+K TF  +LNAC+      EG+   G   
Sbjct: 278 WNAMLAGFTASGCSERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGI---GYFE 334

Query: 166 KM----GFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
           +M      + D+    C+++ +   G       +   M  E +   W +L+ AC
Sbjct: 335 RMTNSSSIEPDIAHYGCMVDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGAC 388


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/701 (34%), Positives = 382/701 (54%), Gaps = 32/701 (4%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           ++A TK+  FG+ +  H  I       ++   N LIN Y +C  I+  R +FD M +RNV
Sbjct: 34  VSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNV 93

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VSW +L+       L  E + LF  M+  + ++PN      +IS+C+    +  G +   
Sbjct: 94  VSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHG 153

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y  + G+  +  + NAL+ MY +   V  A  ++ E    ++   N I++  +  G   E
Sbjct: 154 YALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSE 213

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +LD M+      D VT ++A    + L DL  G   H  + R G E    + + +ID
Sbjct: 214 ALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIID 273

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG                               ++ +AR+VF+ +  ++ +SW  +
Sbjct: 274 MYGKCG-------------------------------NILNARKVFNRLQTKNVVSWTAI 302

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           L   +Q   FEEA+  F  M  + +  +  T   + ++C  + AL   K ++  I+K+G 
Sbjct: 303 LAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGF 362

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
              + +  AL++M+++ G  + A +VF  M  RD   W+A I  ++  G G +A+ +F E
Sbjct: 363 EDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQE 422

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           ML     P  + FVGVL+AC+H G V +G++    +    G+ P + HY C+V LL +AG
Sbjct: 423 MLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAG 482

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L EA + +KS PV+ + V W +LL+AC  HQN  +    AE + ++DP   G ++LLSN
Sbjct: 483 RLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSN 542

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           +YA A +W  V ++R  M+E+ ++K PG+S IE+   +H F S  ++HPE N I   ++E
Sbjct: 543 MYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQE 602

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           +   +R  GYVPD+  V  DV++++K+  +S+HSEKLA+A+GL+ T    PIRV+KNLR+
Sbjct: 603 LLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRM 662

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCHS  KL+SKV +R IIVRD NRFH F  G CSC+D+W
Sbjct: 663 CVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 258/565 (45%), Gaps = 52/565 (9%)

Query: 15  PTVTTLTNQHKA---KTTPKDSP---SIGSLK---NCKTLNELKQPHCHILKQGLGHKPS 65
           PT+  L   HK    K++    P   +I  LK   + K L   K  H H++      K +
Sbjct: 2   PTLRLLAPTHKPFLLKSSTVGHPLEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDN 61

Query: 66  YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
            I +V          + +  A+  FD   K N  S     + +L+ GY   GL +E + L
Sbjct: 62  -IVQVNSLINLYAKCDQIMVARILFDGMRKRNVVS-----WGALMAGYFHNGLVLEVLRL 115

Query: 126 YVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           +  +     + P+++ F  ++++C+ S    EG Q HG  +K G     +V+N LI  Y 
Sbjct: 116 FKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYS 175

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
              D+     V+ E+   +V S+  +I        P EA+ +   MV+E I  ++VT V 
Sbjct: 176 RRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVT 235

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
               C+ L++L LG +V   +   G + ++ + +A++DMY KCG +  A+++F   + +N
Sbjct: 236 AFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKN 295

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +V    I++ Y + G   EAL    EM + G  P+  T    +++ A +  L  G++ H 
Sbjct: 296 VVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHT 355

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
            + ++G E    + N +I+MY K G  E A ++F  M  +  ++W+++I GL  +G    
Sbjct: 356 RIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHG---- 411

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                              LG         EA+ +F+ ML+ +     VT VGV SAC +
Sbjct: 412 -------------------LG--------REALVVFQEMLAAKECPHYVTFVGVLSACAH 444

Query: 485 LGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWT 542
           LG++     ++   +++ GI   ++  T +V +  + G    A    +    K DV AW 
Sbjct: 445 LGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWR 504

Query: 543 AAIGAMAMEGN---GEQAVELFNEM 564
             + A  +  N   G++  EL  +M
Sbjct: 505 TLLSACHVHQNYGLGKKVAELVLQM 529


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/553 (41%), Positives = 324/553 (58%), Gaps = 32/553 (5%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  LF +    ++VL NT+   Y R      A  +  ++L  G  PD  T  S + A A 
Sbjct: 74  AHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACAS 133

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
              L  GR  H   ++ GL     +C T+I+MY  C + + A R+FD +    VV++N+ 
Sbjct: 134 CKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNA- 192

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
                                         M+ G  + +   EA+ LFR + +  +K   
Sbjct: 193 ------------------------------MITGYARGSRPNEALSLFRELQARNLKPTD 222

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           VTM+ V S+C  LGALDL KW++ Y++KNG +  +++ TAL+DM+A+CG    A+ VF  
Sbjct: 223 VTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFEN 282

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M  RD  AW+A I A A+ G+G +AV LF EM + G +PD I F+G+L ACSH GLV +G
Sbjct: 283 MAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEG 342

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
           +  F  M D +GV P I HYGCMVDLLGRAG L EA + I  +P+ P  ++W +LL+AC 
Sbjct: 343 FEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACG 402

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H NV++     E+I ELD    G +++LSN+ A AG+W +V  VR  M E+G+ K+PG 
Sbjct: 403 SHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGC 462

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL-LDVDEQEKKY 771
           SS+EVN  VHEF SGD  H     +   L E+   L+  GYVP+ + V   D++++EK+ 
Sbjct: 463 SSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEV 522

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
            L +HSEKLA+ FGL++T     IRVVKNLR+C DCHS AKL+S ++DR+II+RD  RFH
Sbjct: 523 TLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFH 582

Query: 832 FFRQGSCSCSDFW 844
            F+ G CSC D+W
Sbjct: 583 HFKDGKCSCEDYW 595



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 234/496 (47%), Gaps = 26/496 (5%)

Query: 15  PTVTTL--TNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVC 72
           P VT +   N +   T P     +  L  C +L ELKQ     +K  L    S ++K + 
Sbjct: 6   PPVTPMCPPNSNSNTTHP-----LSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFIN 60

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
            C+   T  S+ +A   FD   + +     + ++N++ RGY+     + A +L+ ++   
Sbjct: 61  FCSLNPTTTSMQHAHHLFDQIPQPD-----IVLFNTMARGYARTDTPLRAFTLFTQILFS 115

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+ PD +TFP +L AC    A  EG Q+H   +K+G   +V+V   LIN Y  C ++   
Sbjct: 116 GLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCA 175

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           RRVFD++ E  VV++ ++I   AR   P EA+ LF E+    +KP  VTM+ V+S+CA L
Sbjct: 176 RRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALL 235

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             L+LG  +  Y+ + G      +  AL+DMY KCG++D A  +F     R+    + ++
Sbjct: 236 GALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMI 295

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGL 371
             Y   G   +A+++  EM   G  PD +T L  + A +  G +  G    +G   + G+
Sbjct: 296 MAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGV 355

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFS 430
                    M+D+  + G+ E A      +    T + W +L++    +G+VE  + V  
Sbjct: 356 IPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIE 415

Query: 431 EMPGRD--HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           ++   D  H     +L  L       E +   R +++ER         GV    G   ++
Sbjct: 416 QIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNER---------GVVKIPG-CSSV 465

Query: 489 DLAKWIYAYIEKNGIH 504
           ++   ++ +   +G+H
Sbjct: 466 EVNNVVHEFFSGDGVH 481



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 4/234 (1%)

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           ++ A  +F ++P  D + +NTM  G  + +    A  LF  +L   +  D  T   +  A
Sbjct: 71  MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C    AL+  + ++    K G+  ++ +   L++M+  C +   A +VF ++ +  V  +
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMT 600
            A I   A      +A+ LF E+  + +KP  +  + VL++C+  G ++ G W       
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKW--MHEYV 248

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             +G +  +     ++D+  + G L +A+ + ++M V      W +++ A   H
Sbjct: 249 KKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQA-WSAMIMAYAIH 301


>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
          Length = 706

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/482 (43%), Positives = 304/482 (63%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H   LR+G  G   + +  + MY   G    A   F  +++  VV   +++  L   G+ 
Sbjct: 225 HASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGEA 284

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           ++ARE+F  MP RDH++WN M+ G        EA+ LF  M      V  VT+V   +AC
Sbjct: 285 DAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTAC 344

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             LGAL+  KW+++     G+   + L TAL+DM+++CG    AM+VF  M +R+V  WT
Sbjct: 345 AQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWT 404

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           +A+  +AM G G   + LF  M   G++P+ + FV VL  CS  GLV++G   F SM   
Sbjct: 405 SAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSN 464

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           HG+ P + HYGCMVDL GRAG L +A++ I  MP+EP++ +WG+LL A + H+NV++  Y
Sbjct: 465 HGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKY 524

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           A +++  ++ +    HVLLSNIYA +  W  V+ VR  MK +G++K+PG S+IEV GKVH
Sbjct: 525 AMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVH 584

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           EF  G ++HP    I  ML EMN RLR  GY+ +   VL D++E++K+  +S HSEKLA+
Sbjct: 585 EFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAI 644

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGL++  + M IR+VKNLR+C DCH + K++SKV++REI++RD NRFH F+ G+CSC D
Sbjct: 645 AFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKD 704

Query: 843 FW 844
           +W
Sbjct: 705 YW 706



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 43/341 (12%)

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV-- 158
           ATL  +NSL+R    +  G      +       + PD ++F F++ A T  +A       
Sbjct: 160 ATLLAHNSLLR---ALARGRRPHLAFGAFRDLPLAPDNYSFTFLVRAATALAAAAASALD 216

Query: 159 ------QVHGAIVKMGFDRDVFVENCLINFYGECGDIVD--------------------- 191
                  VH + ++ G   D  V++  ++ Y   GD+                       
Sbjct: 217 AALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVG 276

Query: 192 ----------GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
                      R +FD M +R+ V+W ++I         +EA+ LF EM   G     VT
Sbjct: 277 ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT 336

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           +V  ++ACA+L  LE G  V +     GM+ +  +  AL+DMY KCGAV  A ++F    
Sbjct: 337 LVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 396

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           +RN+    + +S     G+ R+ LA+   M   G  P+ VT +  +   +  G +  GR 
Sbjct: 397 ERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRA 456

Query: 362 CHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           C   +  N G++ W      M+D+Y + G+ + A    + M
Sbjct: 457 CFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGM 497



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 33/281 (11%)

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           V A+V      G  D A++LF     R+ V  N +++ YV  G +REAL + DEM   G 
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
               VT++SA++A AQLG L  G+  H      G+    ++   +IDMY KCG    A  
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +FD M  + V +W S ++GL  NG                               M  + 
Sbjct: 391 VFDSMGERNVYTWTSAVSGLAMNG-------------------------------MGRDC 419

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVD 515
           + LF+ M S  ++ + VT V V   C   G +D  +  +  ++ N GI   ++    +VD
Sbjct: 420 LALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVD 479

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           ++ R G    A+     M  +     W A + A  +  N E
Sbjct: 480 LYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVE 520



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 5/226 (2%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           VVC  A +G   +   A  A + +  D         +N++I GY   G   EA+ L+ E+
Sbjct: 268 VVCVTAMVGALATGGEADAARELF--DGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM 325

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              G    + T    L AC +  A   G  VH      G    V +   LI+ Y +CG +
Sbjct: 326 RHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAV 385

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                VFD M ERNV +WTS +   A   + ++ + LF  M   G++PN VT V V+  C
Sbjct: 386 AAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGC 445

Query: 250 AKLQNLELGDRVC--AYIDELGMKANALMVNALVDMYMKCGAVDTA 293
           +    ++ G R C  +     G+         +VD+Y + G +D A
Sbjct: 446 SMAGLVDEG-RACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDA 490


>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
 gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
          Length = 699

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/482 (43%), Positives = 304/482 (63%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H   LR+G  G   + +  + MY   G    A   F  +++  VV   +++  L   G+ 
Sbjct: 218 HASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGEA 277

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           ++ARE+F  MP RDH++WN M+ G        EA+ LF  M      V  VT+V   +AC
Sbjct: 278 DAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTAC 337

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             LGAL+  KW+++     G+   + L TAL+DM+++CG    AM+VF  M +R+V  WT
Sbjct: 338 AQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWT 397

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           +A+  +AM G G   + LF  M   G++P+ + FV VL  CS  GLV++G   F SM   
Sbjct: 398 SAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSN 457

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           HG+ P + HYGCMVDL GRAG L +A++ I  MP+EP++ +WG+LL A + H+NV++  Y
Sbjct: 458 HGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKY 517

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           A +++  ++ +    HVLLSNIYA +  W  V+ VR  MK +G++K+PG S+IEV GKVH
Sbjct: 518 AMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVH 577

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           EF  G ++HP    I  ML EMN RLR  GY+ +   VL D++E++K+  +S HSEKLA+
Sbjct: 578 EFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAI 637

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGL++  + M IR+VKNLR+C DCH + K++SKV++REI++RD NRFH F+ G+CSC D
Sbjct: 638 AFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKD 697

Query: 843 FW 844
           +W
Sbjct: 698 YW 699



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 43/341 (12%)

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV-- 158
           ATL  +NSL+R    +  G      +       + PD ++F F++ A T  +A       
Sbjct: 153 ATLLAHNSLLR---ALARGRRPHLAFGAFRDLPLAPDNYSFTFLVRAATALAAAAASALD 209

Query: 159 ------QVHGAIVKMGFDRDVFVENCLINFYGECGDIVD--------------------- 191
                  VH + ++ G   D  V++  ++ Y   GD+                       
Sbjct: 210 AALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVG 269

Query: 192 ----------GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
                      R +FD M +R+ V+W ++I         +EA+ LF EM   G     VT
Sbjct: 270 ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT 329

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           +V  ++ACA+L  LE G  V +     GM+ +  +  AL+DMY KCGAV  A ++F    
Sbjct: 330 LVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 389

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           +RN+    + +S     G+ R+ LA+   M   G  P+ VT +  +   +  G +  GR 
Sbjct: 390 ERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRA 449

Query: 362 CHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           C   +  N G++ W      M+D+Y + G+ + A    + M
Sbjct: 450 CFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGM 490



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 33/281 (11%)

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           V A+V      G  D A++LF     R+ V  N +++ YV  G +REAL + DEM   G 
Sbjct: 264 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 323

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
               VT++SA++A AQLG L  G+  H      G+    ++   +IDMY KCG    A  
Sbjct: 324 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 383

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +FD M  + V +W S ++GL  NG                               M  + 
Sbjct: 384 VFDSMGERNVYTWTSAVSGLAMNG-------------------------------MGRDC 412

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVD 515
           + LF+ M S  ++ + VT V V   C   G +D  +  +  ++ N GI   ++    +VD
Sbjct: 413 LALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVD 472

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           ++ R G    A+     M  +     W A + A  +  N E
Sbjct: 473 LYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVE 513



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 5/226 (2%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           VVC  A +G   +   A  A + +  D         +N++I GY   G   EA+ L+ E+
Sbjct: 261 VVCVTAMVGALATGGEADAARELF--DGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM 318

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              G    + T    L AC +  A   G  VH      G    V +   LI+ Y +CG +
Sbjct: 319 RHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAV 378

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                VFD M ERNV +WTS +   A   + ++ + LF  M   G++PN VT V V+  C
Sbjct: 379 AAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGC 438

Query: 250 AKLQNLELGDRVC--AYIDELGMKANALMVNALVDMYMKCGAVDTA 293
           +    ++ G R C  +     G+         +VD+Y + G +D A
Sbjct: 439 SMAGLVDEG-RACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDA 483


>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
          Length = 706

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/482 (43%), Positives = 304/482 (63%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H   LR+G  G   + +  + MY   G    A   F  +++  VV   +++  L   G+ 
Sbjct: 225 HASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGEA 284

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           ++ARE+F  MP RDH++WN M+ G        EA+ LF  M      V  VT+V   +AC
Sbjct: 285 DAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTAC 344

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             LGAL+  KW+++     G+   + L TAL+DM+++CG    AM+VF  M +R+V  WT
Sbjct: 345 AQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWT 404

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           +A+  +AM G G   + LF  M   G++P+ + FV VL  CS  GLV++G   F SM   
Sbjct: 405 SAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSN 464

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           HG+ P + HYGCMVDL GRAG L +A++ I  MP+EP++ +WG+LL A + H+NV++  Y
Sbjct: 465 HGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKY 524

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           A +++  ++ +    HVLLSNIYA +  W  V+ VR  MK +G++K+PG S+IEV GKVH
Sbjct: 525 AMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVH 584

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           EF  G ++HP    I  ML EMN RLR  GY+ +   VL D++E++K+  +S HSEKLA+
Sbjct: 585 EFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAI 644

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGL++  + M IR+VKNLR+C DCH + K++SKV++REI++RD NRFH F+ G+CSC D
Sbjct: 645 AFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKD 704

Query: 843 FW 844
           +W
Sbjct: 705 YW 706



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 147/341 (43%), Gaps = 43/341 (12%)

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV-- 158
           ATL  +NSL+R    +  G      +       ++PD ++F F++ A T  +A       
Sbjct: 160 ATLLAHNSLLR---ALARGRRPHLAFGAFRDLPLVPDNYSFTFLVRAATALAAAAASALD 216

Query: 159 ------QVHGAIVKMGFDRDVFVENCLINFYGECGDIVD--------------------- 191
                  VH + ++ G   D  V++  ++ Y   GD+                       
Sbjct: 217 AALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVG 276

Query: 192 ----------GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
                      R +FD M +R+ V+W ++I         +EA+ LF EM   G     VT
Sbjct: 277 ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT 336

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           +V  ++ACA+L  LE G  V +     GM+ +  +  AL+DMY KCGAV  A ++F    
Sbjct: 337 LVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 396

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           +RN+    + +S     G+ R+ LA+   M   G  P+ VT +  +   +  G +  GR 
Sbjct: 397 ERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRA 456

Query: 362 CHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           C   +  N G++ W      M+D+Y + G+ + A    + M
Sbjct: 457 CFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGM 497



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 33/281 (11%)

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           V A+V      G  D A++LF     R+ V  N +++ YV  G +REAL + DEM   G 
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
               VT++SA++A AQLG L  G+  H      G+    ++   +IDMY KCG    A  
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +FD M  + V +W S ++GL  NG                               M  + 
Sbjct: 391 VFDSMGERNVYTWTSAVSGLAMNG-------------------------------MGRDC 419

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVD 515
           + LF+ M S  ++ + VT V V   C   G +D  +  +  ++ N GI   ++    +VD
Sbjct: 420 LALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVD 479

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           ++ R G    A+     M  +     W A + A  +  N E
Sbjct: 480 LYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVE 520



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 5/226 (2%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           VVC  A +G   +   A  A + +  D         +N++I GY   G   EA+ L+ E+
Sbjct: 268 VVCVTAMVGALATGGEADAARELF--DGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM 325

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
              G    + T    L AC +  A   G  VH      G    V +   LI+ Y +CG +
Sbjct: 326 RHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAV 385

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                VFD M ERNV +WTS +   A   + ++ + LF  M   G++PN VT V V+  C
Sbjct: 386 AAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGC 445

Query: 250 AKLQNLELGDRVC--AYIDELGMKANALMVNALVDMYMKCGAVDTA 293
           +    ++ G R C  +     G+         +VD+Y + G +D A
Sbjct: 446 SMAGLVDEG-RACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDA 490


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/620 (37%), Positives = 358/620 (57%), Gaps = 44/620 (7%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+  GI+P++ T   +I AC+ L++ E G R+   + + G ++   + N+L+ MY KC  
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA--- 346
            + ++Q+F E  D+N V  + I+   ++    +E  ++  +ML  G RP R  +L+A   
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           V +  +  D+      +  V+ NGL+   S+ +    M+ +CG+ E+A ++FD + +K +
Sbjct: 121 VRSHEEADDV------YRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDL 174

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+W + I   +K           ++MP                     EA+ L + M+ +
Sbjct: 175 VTWATTIEAYVK-----------ADMP--------------------LEALGLLKQMMLQ 203

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA--TALVDMFARCGDPQ 524
            I  D +T++GV  AC  L +  LA  ++  I   G   +  LA  TAL+D++ +CG   
Sbjct: 204 GIFPDAITLLGVIRACSTLASFQLAHIVHGII-TTGFFYNQLLAVETALIDLYVKCGSLT 262

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A +VF  M++R++  W+A I    M G G +A+ LF++M +  +KPD I FV +L+ACS
Sbjct: 263 YARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACS 321

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLV +GW  F SM    GV+P+  HY CMVD+LGRAG L EA D I+ MPV PN  +W
Sbjct: 322 HSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVW 381

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
           G+LL AC+ H NVD+A   A  + +LDP  +G +V+L NIY   GK      +R  MK +
Sbjct: 382 GALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNR 441

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
           G++K+ G S IE+  K++ F +GD SHP+ + I S L  +  R+R  GY PD+  VL DV
Sbjct: 442 GVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDV 501

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           DE+ K+ +L  HSEKLA+ FGL++      IR+ KNLR+C DCH+  K +SKV  REI+V
Sbjct: 502 DEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVV 561

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD +RFH F+ G+CSC D+W
Sbjct: 562 RDAHRFHHFKNGACSCRDYW 581



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 184/337 (54%), Gaps = 9/337 (2%)

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            GI PD FTFPF++ AC+    F  G+++H  +VK G+   VF+ N LI  YG+C     
Sbjct: 4   LGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYEL 63

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R+VFDEM ++N VSW+++I AC + D  KE   LF +M+ EG +P+      +++A A 
Sbjct: 64  SRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGA---ILNAMAC 120

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +++ E  D V   + E G+  +  + +A   M+ +CG V+ A++LF     ++LV   T 
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +  YV+  +  EAL +L +M+L G  PD +T+L  + A + L       + HG ++  G 
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGF 239

Query: 372 --EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
                 ++   +ID+Y+KCG    A ++FD M  + +++W+++I+G   +G    A  +F
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299

Query: 430 SEMPGR---DHISWNTMLGGLTQENMFEEAMELFRVM 463
            +M      DHI++ ++L   +   +  E  E F  M
Sbjct: 300 DQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSM 336



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 16/223 (7%)

Query: 34  PSIGSLKNC----KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKA 89
           PS G++ N     ++  E    +  +++ GL    S  S      A+ G  E    A+K 
Sbjct: 109 PSRGAILNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVE---VARKL 165

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           FD  +     S  L  + + I  Y    + +EA+ L  ++   GI PD  T   V+ AC+
Sbjct: 166 FDGIM-----SKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACS 220

Query: 150 KSSAFGEGVQVHGAIVKMGF--DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
             ++F     VHG I+  GF  ++ + VE  LI+ Y +CG +   R+VFD M ERN+++W
Sbjct: 221 TLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITW 279

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           +++I         +EA+ LF +M +  +KP+ +T V ++SAC+
Sbjct: 280 SAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACS 321



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 8/135 (5%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SLTYA+K FD   + N     +  ++++I GY   G G EA++L+ ++    + PD  TF
Sbjct: 260 SLTYARKVFDGMQERN-----IITWSAMISGYGMHGWGREALNLFDQMKA-SVKPDHITF 313

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
             +L+AC+ S    EG +   ++ +  G         C+++  G  G + +     + M 
Sbjct: 314 VSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMP 373

Query: 201 ER-NVVSWTSLICAC 214
            R N   W +L+ AC
Sbjct: 374 VRPNAAVWGALLGAC 388


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/765 (32%), Positives = 400/765 (52%), Gaps = 74/765 (9%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           +L  A+K FD  ++    + T+     LI GYS +    EA  L+V++   G  PD  TF
Sbjct: 93  NLGEARKLFDGMVERTAVTWTI-----LIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L+ C       +  QV   I+K+G+D  + V N L++ Y                  
Sbjct: 148 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSY------------------ 189

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
                     C   R DL   A  LF EM E     +S T   V+ A   L ++ LG ++
Sbjct: 190 ----------CKSNRLDL---ACQLFKEMPE----IDSFTFAAVLCANIGLDDIVLGQQI 232

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            +++ +     N  + NAL+D Y K  +V  A++LF E  +++ V  N I+S Y   G  
Sbjct: 233 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 292

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
           + A  +  E+        +    + +S ++   D   GR  H   +    +    + N++
Sbjct: 293 KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSL 352

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           +DMY KCGK                                E A  +F+ +  R  + W 
Sbjct: 353 VDMYAKCGK-------------------------------FEEAEMIFTNLTHRSAVPWT 381

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            M+    Q+  +EE ++LF  M    +  D+ T   +  A   + +L L K ++++I K+
Sbjct: 382 AMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS 441

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G   ++   +AL+D++A+CG  + A+Q F+ M  R++ +W A I A A  G  E  ++ F
Sbjct: 442 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 501

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
            EM+  G++PDS+ F+GVL+ACSH GLV +G WH F SMT I+ + P+  HY  +VD+L 
Sbjct: 502 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWH-FNSMTQIYKLDPRREHYASVVDMLC 560

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV-HV 679
           R+G   EA  L+  MP++P++++W S+L AC+ H+N ++A  AA+++  ++  +    +V
Sbjct: 561 RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYV 620

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
            +SNIYA+AG+W NV++V   M+++G++KLP  S +E+  + H F++ D  HP++  I  
Sbjct: 621 NMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRK 680

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            +  +   + + GY PD +  L + DE+ K   L +HSE+LA+AF LIST +  PI V+K
Sbjct: 681 KIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMK 740

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR C DCH+  K++SK+  REI VRD+ RFH FR G CSC DFW
Sbjct: 741 NLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 199/429 (46%), Gaps = 44/429 (10%)

Query: 63  KPSYISKVVCTCAQMGTF---ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLG 119
           K +++  V  + A +  +   +S+  A+K FD   + +  S     YN +I GY+  G  
Sbjct: 238 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVS-----YNVIISGYAWDGKH 292

Query: 120 VEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
             A  L+ EL        +F F  +L+  + +  +  G Q+H   +    D ++ V N L
Sbjct: 293 KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSL 352

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           ++ Y +CG   +   +F  ++ R+ V WT++I A  ++   +E + LF +M +  +  + 
Sbjct: 353 VDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 412

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
            T   ++ A A + +L LG ++ ++I + G  +N    +AL+D+Y KCG++  A Q F E
Sbjct: 413 ATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQE 472

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
             DRN+V  N ++S Y + G A   L    EM+L G +PD V+ L  +SA +        
Sbjct: 473 MPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS-------- 524

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
              H  ++  GL  W    N+M  +Y    ++E                + S++  L ++
Sbjct: 525 ---HSGLVEEGL--WH--FNSMTQIYKLDPRRE---------------HYASVVDMLCRS 562

Query: 420 GDVESAREVFSEMP-GRDHISWNTMLGG----LTQENMFEEAMELFRVMLSERIKVDRVT 474
           G    A ++ +EMP   D I W+++L        QE     A +LF  M   R     V 
Sbjct: 563 GRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFN-MEELRDAAPYVN 621

Query: 475 MVGVASACG 483
           M  + +A G
Sbjct: 622 MSNIYAAAG 630



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 214/503 (42%), Gaps = 106/503 (21%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYID----ELGMKANALMVNALVDMYMKCGAV 290
            +PN++  +  +++ A LQ+ +L   V   ID    + G   +    N  V  ++K G +
Sbjct: 4   FRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGEL 63

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVR---LGLAR------------------------- 322
             A+QLF +   +N V  N ++S YV+   LG AR                         
Sbjct: 64  SQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLN 123

Query: 323 ---EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE------- 372
              EA  +  +M   G  PD VT ++          LL G  C+G+ + N +        
Sbjct: 124 QFKEAFELFVQMQRCGTEPDYVTFVT----------LLSG--CNGHEMGNQITQVQTQII 171

Query: 373 --GWDS---ICNTMIDMYMKCGKQEMACRIFDHMSN------------------------ 403
             G+DS   + NT++D Y K  + ++AC++F  M                          
Sbjct: 172 KLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQ 231

Query: 404 ------KTVVSWNSLIAGLI-----KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
                 KT   WN  ++  +     K+  V  AR++F EMP +D +S+N ++ G   +  
Sbjct: 232 IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK 291

Query: 453 FEEAMELFRVM---LSERIKVDRVTMVGVASACGYLGALD--LAKWIYAYIEKNGIHCDM 507
            + A +LFR +     +R +    TM+ +AS       LD  + + I+A         ++
Sbjct: 292 HKYAFDLFRELQFTAFDRKQFPFATMLSIAS-----NTLDWEMGRQIHAQTIVTTADSEI 346

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            +  +LVDM+A+CG  + A  +F  +  R    WTA I A   +G  E+ ++LFN+M + 
Sbjct: 347 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 406

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
            +  D   F  +L A +    ++ G  L  S     G    +     ++D+  + G + +
Sbjct: 407 SVIADQATFASLLRASASIASLSLGKQL-HSFIIKSGFMSNVFSGSALLDVYAKCGSIKD 465

Query: 628 ALDLIKSMPVEPNDVIWGSLLAA 650
           A+   + MP + N V W ++++A
Sbjct: 466 AVQTFQEMP-DRNIVSWNAMISA 487


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/610 (37%), Positives = 346/610 (56%), Gaps = 32/610 (5%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           + P        I+ACA+ +NLE   ++ A++       +A + N+L+ MY KC +V  A+
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            +F + + +++V   ++++ Y +  +  EA+ +L  ML    +P+  T  S + A+    
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           D   GR  H   ++ G      + + ++DMY +CGK +MA  +FD + +K          
Sbjct: 167 DSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK---------- 216

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
               NG                 +SWN ++ G  ++   E A+  F  ML    +    T
Sbjct: 217 ----NG-----------------VSWNALISGFARKGDGESALMTFAEMLRNGFEATHFT 255

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              V S+   LGAL+  KW++A++ K+       +   L+DM+A+ G    A +VF R++
Sbjct: 256 YSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVD 315

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
            +D+  W + + A A  G G++AV  F EM + G+  + I F+ +LTACSHGGLV +G  
Sbjct: 316 NKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKR 375

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F  M + + + P+I HY  +V LLGRAGLL  AL  I  MP+EP   +WG+LLAAC+ H
Sbjct: 376 YFEMMKE-YDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +N  +  +AA+ + ELDP+ SG  VLL NIYAS G+W   ARVR+ MK  G++K P  S 
Sbjct: 435 KNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSW 494

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           +E+   VH F + D++HP+   I  M  E++ ++R  GYVPD+  VLL VD+QEK+  L 
Sbjct: 495 VEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQ 554

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEKLA+AF LI       IR++KN+R+C DCHS  K +SKV+ REI+VRD NRFH F 
Sbjct: 555 YHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFS 614

Query: 835 QGSCSCSDFW 844
            GSCSC D+W
Sbjct: 615 SGSCSCGDYW 624



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 197/423 (46%), Gaps = 32/423 (7%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P    +   + AC +S    +  ++H  +    F  D F++N LI+ Y +C  ++D R
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            VFD+M  +++VSWTSLI   A+ D+P EA+ L   M++   KPN  T   ++ A     
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +   G ++ A   + G   +  + +AL+DMY +CG +D A  +F +   +N V  N ++S
Sbjct: 167 DSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            + R G    AL    EML +G      T  S  S+ A+LG L  G+  H +V+++  + 
Sbjct: 227 GFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKL 286

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + NT++DMY K G    A ++FD + NK +V+WNS                      
Sbjct: 287 TAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNS---------------------- 324

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                    ML    Q  + +EA+  F  M    + ++++T + + +AC + G +   K 
Sbjct: 325 ---------MLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKR 375

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEG 552
            +  +++  +  ++     +V +  R G    A+    +M     +A W A + A  M  
Sbjct: 376 YFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHK 435

Query: 553 NGE 555
           N +
Sbjct: 436 NAK 438



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 194/414 (46%), Gaps = 20/414 (4%)

Query: 29  TPKDSPS-IGSLKNCKTLNELKQPHCHILKQ---GLGHKPSYISKVVCTCAQMGTFESLT 84
           TP+   S I +    K L + ++ H H+      G     + +  + C C       S+ 
Sbjct: 50  TPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKC------RSVL 103

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
            A+  FD   + +  S T     SLI GY+   + VEAI L   +      P+ FTF  +
Sbjct: 104 DARNVFDQMRRKDMVSWT-----SLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L A    +  G G Q+H   VK G+  DV+V + L++ Y  CG +     VFD++  +N 
Sbjct: 159 LKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           VSW +LI   AR+   + A+  F EM+  G +    T   V S+ A+L  LE G  V A+
Sbjct: 219 VSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAH 278

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           + +   K  A + N L+DMY K G++  A+++F    +++LV  N++++ + + GL +EA
Sbjct: 279 VIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEA 338

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           ++  +EM   G   +++T L  ++A +  G +  G+     +    LE       T++ +
Sbjct: 339 VSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVAL 398

Query: 385 YMKCGKQEMA-CRIFDHMSNKTVVSWNSLIAG--LIKNGDVE--SAREVFSEMP 433
             + G    A   IF      T   W +L+A   + KN  V   +A  VF   P
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDP 452


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 260/769 (33%), Positives = 407/769 (52%), Gaps = 50/769 (6%)

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
           GT   ++ A K FD   + N     L  +NS+IR +S  G                 +PD
Sbjct: 233 GTHGFVSDALKLFDIMPERN-----LVSWNSMIRVFSDNG------------DDGAFMPD 275

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
             T   VL  C +    G G  VHG  VK+  D+++ V N L++ Y + G I+D + +F 
Sbjct: 276 VATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFK 335

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMV--EEGIKPNSVTMVCVISACAKLQNL 255
             + +NVVSW +++   +          L  +M+   E +K + VT++  +  C     L
Sbjct: 336 LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVL 395

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
                +  Y  +     + L+ NA V  Y KCG++  A+++F   + + L   N ++  Y
Sbjct: 396 PSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGY 455

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            +    R +L    +M   G  PD  T+ S +SA ++L  L  G+  HG+++RN LE   
Sbjct: 456 AQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 515

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            +  +++ +Y+ CG+      +FD M + ++VS                           
Sbjct: 516 FVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVS--------------------------- 548

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
               WNT++ G  Q    E A+ LFR M+   I+   ++M+ V  AC  L +L L +  +
Sbjct: 549 ----WNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAH 604

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           AY  K+ +  +  +A +++DM+A+ G   ++ +VF  ++++  ++W A I    M G  +
Sbjct: 605 AYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAK 664

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A++LF EM R G  PD + F+GVLTAC+H GL+++G      M    G+ P + HY C+
Sbjct: 665 EAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACV 724

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           +D+LGRAG L  AL +   M  EP+  IW SLL+ C+ HQN+++    A ++  L+PEK 
Sbjct: 725 IDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKP 784

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
             +VLLSN+YA  GKW +V +VR +MKE  +RK  G S IE+NGKV  F  G+       
Sbjct: 785 ENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFE 844

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            I S+   +  ++   GY PD ++V  D+ E+EK   L  HSEKLA+ +GLI TS+   +
Sbjct: 845 EIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTL 904

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           RV KNLR+C DCH+ AKL+SKV +REI+VRDN RFH F +G CSC D+W
Sbjct: 905 RVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 169/659 (25%), Positives = 285/659 (43%), Gaps = 105/659 (15%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAF 154
           D   S  LF +N++I  YS   L  E + +++++ +   +LPD FTFP V+ AC   S  
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDV 203

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           G G+ VHG +VK G   D+FV N L++FYG  G + D  ++FD M ERN+VSW S+I   
Sbjct: 204 GIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI--- 260

Query: 215 ARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
                      +F +  ++G   P+  T+V V+  CA+ + + +G  V  +  +L +   
Sbjct: 261 ----------RVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKE 310

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
            ++ NAL+DMY K G +  ++ +F    ++N+V  NT++  +   G       +L +ML 
Sbjct: 311 LVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLA 370

Query: 334 HGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
                + D VT+L+AV        L   +  H Y L+      + + N  +  Y KCG  
Sbjct: 371 GSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSL 430

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             A R+F  + +KT+ SWN+LI G  ++ D   + +   +M             GL  +N
Sbjct: 431 SYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKN----------SGLLPDN 480

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
                                 T+  + SAC  L +L L K ++ +I +N +  D+ +  
Sbjct: 481 F---------------------TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 519

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
           +++ ++  CG+      +F  ME   + +W   I      G  E+A+ LF +M+  GI+P
Sbjct: 520 SVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQP 579

Query: 572 DSIVFVGVLTACS-----------------------------------HGGLVNQGWHLF 596
             I  + V  ACS                                     G + Q   +F
Sbjct: 580 CGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVF 639

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQK 653
             + +    S     +  M+   G  G   EA+ L + M      P+D+ +  +L AC  
Sbjct: 640 NGLKEKSAAS-----WNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNH 694

Query: 654 HQNVDIAAYAAERITELDPEKSGV--------HVLLSNIYASAGKWTNVARVRLQMKEQ 704
                 +    E +  LD  KS          +  + ++   AG+  N  RV  +M E+
Sbjct: 695 ------SGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEE 747



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 213/395 (53%), Gaps = 18/395 (4%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
            L  LK+ HC+ LKQ   +     +  V + A+ G   SL+YAQ+ F + I+    S TL
Sbjct: 394 VLPSLKELHCYSLKQEFVYDELLANAFVASYAKCG---SLSYAQRVF-HGIR----SKTL 445

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
             +N+LI GY+       ++  ++++   G+LPD FT   +L+AC+K  +   G +VHG 
Sbjct: 446 NSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGF 505

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           I++   +RD+FV   +++ Y  CG++   + +FD M + ++VSW ++I    +   P+ A
Sbjct: 506 IIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERA 565

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + LF +MV  GI+P  ++M+ V  AC+ L +L LG    AY  +  ++ NA +  +++DM
Sbjct: 566 LGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDM 625

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y K GA+  + ++F   K+++    N ++  Y   G A+EA+ + +EM   G  PD +T 
Sbjct: 626 YAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTF 685

Query: 344 LSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           L  ++A    G L  G     +M   + L+  L+ +  +    IDM  + G+ + A R+ 
Sbjct: 686 LGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDNALRVA 741

Query: 399 DHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
             MS +  V  WNSL++    + ++E   +V +++
Sbjct: 742 AEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKL 776



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 138/565 (24%), Positives = 244/565 (43%), Gaps = 84/565 (14%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKP 237
           +I  Y  CG   D R  FD +  +N+  W ++I + +R +L  E + +F +M+ +  + P
Sbjct: 126 IITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLP 185

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           ++ T  CVI ACA + ++ +G  V   + + G+  +  + NALV  Y   G V  A +LF
Sbjct: 186 DNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLF 245

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
               +RNLV  N+++  +   G   +  A +         PD  T+++ +   A+  ++ 
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNG---DDGAFM---------PDVATVVTVLPVCAREREIG 293

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            G+  HG+ ++  L+    + N ++DMY K G    +  IF   +NK VVSWN+++ G  
Sbjct: 294 VGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFS 353

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
             GD+    ++  +           ML G                  SE +K D VT++ 
Sbjct: 354 AEGDIHGTFDLLRQ-----------MLAG------------------SEDVKADEVTILN 384

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
               C     L   K ++ Y  K     D  LA A V  +A+CG    A +VF  +  + 
Sbjct: 385 AVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKT 444

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH----------GG 587
           +++W A IG  A   +   +++   +M   G+ PD+     +L+ACS            G
Sbjct: 445 LNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHG 504

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYG--CMVDLLGRA-------------------GLLG 626
            + + W L R +     V    +H G  C V +L  A                   G   
Sbjct: 505 FIIRNW-LERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPE 563

Query: 627 EALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIA----AYAAERITELDPEKSGVHV 679
            AL L + M    ++P  +   ++  AC    ++ +     AYA + + E   + + +  
Sbjct: 564 RALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLE---DNAFIAC 620

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQ 704
            + ++YA  G  T  ++V   +KE+
Sbjct: 621 SIIDMYAKNGAITQSSKVFNGLKEK 645



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 24/322 (7%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L  C  L  L   K+ H  I++  L         V+      G    L   Q  FD  ++
Sbjct: 487 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG---ELCTVQVLFDA-ME 542

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           DN    +L  +N++I G+   G    A+ L+ ++  +GI P   +   V  AC+   +  
Sbjct: 543 DN----SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLR 598

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G + H   +K   + + F+   +I+ Y + G I    +VF+ + E++  SW ++I    
Sbjct: 599 LGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYG 658

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----GMK 271
                KEA+ LF EM   G  P+ +T + V++AC     L  G R   Y+D++    G+K
Sbjct: 659 MHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLR---YLDQMKSSFGLK 715

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNLVLCNTIMS---NYVRLGLAREALAI 327
            N      ++DM  + G +D A ++  E  ++ ++ + N+++S    +  L +  +  A 
Sbjct: 716 PNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAK 775

Query: 328 LDEMLLHGPRPDRVTMLSAVSA 349
           L   +L   +P+   +LS + A
Sbjct: 776 L--FVLEPEKPENYVLLSNLYA 795



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 64/300 (21%)

Query: 347 VSASAQLGDLLCGRMCHGYVL-RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
           + AS +  D+  GR  H  V     L   D +C  +I MY  CG  + +   FD + +K 
Sbjct: 91  LQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKN 150

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI--------------------------- 438
           +  WN++I+   +N       E+F +M  + H+                           
Sbjct: 151 LFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVH 210

Query: 439 -------------SWNTMLGGLTQENMFEEAMELFRVMLSER--------IKV------- 470
                          N ++          +A++LF +M  ER        I+V       
Sbjct: 211 GLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIM-PERNLVSWNSMIRVFSDNGDD 269

Query: 471 -----DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
                D  T+V V   C     + + K ++ +  K  +  ++ +  AL+DM+++ G    
Sbjct: 270 GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID 329

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML--RQGIKPDSIVFVGVLTAC 583
           +  +F+    ++V +W   +G  + EG+     +L  +ML   + +K D +  +  +  C
Sbjct: 330 SQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 31/239 (12%)

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I+   + GD++ +  V  E  G D  S +  L       +  EA+ L             
Sbjct: 50  ISNFCETGDLDKSFRVVQEFAGDDESSSDVFL-------LVREALGL------------- 89

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
                +  A G    +++ + I+  +     +  D  L T ++ M+A CG P  +   F 
Sbjct: 90  -----LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFD 144

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML-RQGIKPDSIVFVGVLTACSHGGLVN 590
            +  +++  W A I + +      + +E+F +M+ +  + PD+  F  V+ AC+  G+ +
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACA--GISD 202

Query: 591 QGWHL-FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
            G  L    +    G+   +     +V   G  G + +AL L   MP E N V W S++
Sbjct: 203 VGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP-ERNLVSWNSMI 260


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/609 (37%), Positives = 351/609 (57%), Gaps = 32/609 (5%)

Query: 237 PNSVTMVCVISACAKLQN-LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           P+ +T    + + ++L + L  G+++ A   +L    N  ++ +L+ +Y +CG +  A++
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F E    + V    +++ Y+  G  REA+ +      +G RPD  T +  ++A A++ D
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L  G        + G+     +    +D+Y+KCG  EMA                     
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCG--EMA--------------------- 271

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
                    AREVF +M  +D ++W  M+GG        EA++LF  M +E ++ D   +
Sbjct: 272 --------KAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAV 323

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
            G  SAC  LGALDL +     ++ +    +  L TAL+DM+A+CG    A  VF++M K
Sbjct: 324 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRK 383

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
           +D+  W A I  + M G+ + A  L  +M + G+K +   F+G+L +C+H GL+  G   
Sbjct: 384 KDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 443

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           F +MT ++ +SP+I HYGC+VDLL RAGLL EA  LI  MP+  N VI G+LL  C+ H+
Sbjct: 444 FHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHR 503

Query: 656 NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
           N ++A +   ++  L+P  SG +V+LSNIY++ G+W + A++RL MKE+G+ K+P  S +
Sbjct: 504 NAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWV 563

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           E  GKVHEF  GD+SHP  + I   L E+   ++  GY P    V+ DV+++EK++ L H
Sbjct: 564 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVH 623

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+AF L+ T     IRV KNLR+C DCH+  KL+S++  REIIVRDNNRFH FR 
Sbjct: 624 HSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRD 683

Query: 836 GSCSCSDFW 844
           GSCSC+D+W
Sbjct: 684 GSCSCNDYW 692



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 200/440 (45%), Gaps = 46/440 (10%)

Query: 136 PDKFTFPFVLNACTK-SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           P   TFP  L + ++       G Q+H   +K+    +  V   L+  Y  CG +   +R
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFDEM   + VSWT+LI A       +EAV++       G++P+S T V V++ACA++ +
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G+ V    ++ G+  +  +  A VD+Y+KCG +  A+++F + +D++ V    ++  
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 294

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y   G  REAL +   M   G RPD   +  A+SA  +LG L  GR     V       W
Sbjct: 295 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMV------DW 348

Query: 375 DSICN------TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           D   +       +IDMY KCG    A  +F  M  K ++ WN++I GL   G  ++A   
Sbjct: 349 DEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA--- 405

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
                        T++G + +                  +K++  T +G+  +C + G +
Sbjct: 406 ------------FTLIGQMEKSG----------------VKLNDNTFIGLLCSCTHTGLI 437

Query: 489 -DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIG 546
            D  ++ +   +   I   ++    +VD+ +R G  Q A Q+   M    +     A +G
Sbjct: 438 QDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLG 497

Query: 547 AMAMEGNGEQAVELFNEMLR 566
              +  N E A  +  +++R
Sbjct: 498 GCKIHRNAELAEHVLTQLIR 517



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 179/390 (45%), Gaps = 18/390 (4%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H   LK      P  ++ ++   A+ G    L  AQ+ FD     +  S     + +
Sbjct: 138 EQLHARSLKLPSHTNPHVLTSLLTLYARCGL---LHRAQRVFDEMPHPSTVS-----WTA 189

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI  Y   G   EA+ +       G+ PD FT   VL AC + +    G  V  A  + G
Sbjct: 190 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEG 249

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
             + VFV    ++ Y +CG++   R VFD+M +++ V+W +++   A    P+EA+ LF 
Sbjct: 250 IAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFL 309

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M  EG++P+   +   +SAC +L  L+LG +    +D      N ++  AL+DMY KCG
Sbjct: 310 AMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCG 369

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +   A  +F + + +++++ N ++      G  + A  ++ +M   G + +  T +  + 
Sbjct: 370 STAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLC 429

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           +    G +  GR     M   Y +   +E +  I    +D+  + G  + A ++ D M  
Sbjct: 430 SCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCI----VDLLSRAGLLQEAHQLIDDMPM 485

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               V   +L+ G   + + E A  V +++
Sbjct: 486 PANAVILGALLGGCKIHRNAELAEHVLTQL 515


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 347/605 (57%), Gaps = 42/605 (6%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR--------------- 317
           N +  N L+  Y++CG +D+A ++F + K ++ V  N+I++ + +               
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99

Query: 318 ------------------LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
                             LG+  +A    D M    P  D  +  + +SA AQ+G +   
Sbjct: 100 PQPNTVSYNIMLACHWHHLGV-HDARGFFDSM----PLKDVASWNTMISALAQVGLMGEA 154

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R     +       W +    M+  Y+ CG  + A   F     ++V++W ++I G +K 
Sbjct: 155 RRLFSAMPEKNCVSWSA----MVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKF 210

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G VE A  +F EM  R  ++WN M+ G  +    E+ + LFR ML   +K + +++  V 
Sbjct: 211 GRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVL 270

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
             C  L AL L K ++  + K  +  D    T+LV M+++CGD + A ++F ++ ++DV 
Sbjct: 271 LGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVV 330

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
            W A I   A  G G++A+ LF+EM ++G+KPD I FV VL AC+H GLV+ G   F +M
Sbjct: 331 CWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTM 390

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
               G+  +  HY CMVDLLGRAG L EA+DLIKSMP +P+  I+G+LL AC+ H+N+++
Sbjct: 391 RRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNL 450

Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
           A +AA+ + ELDP  +  +V L+N+YA+  +W +VA +R  MK+  + K+PG S IE+N 
Sbjct: 451 AEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINS 510

Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEK 779
            VH F S D  HPE+ +I   L+++  +++ AGYVPDL  VL DV E+ K+ LL  HSEK
Sbjct: 511 VVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEK 570

Query: 780 LAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCS 839
           LA+AFGL+     +PIRV KNLR+C DCHS  K +S +  REIIVRD  RFH F+ G CS
Sbjct: 571 LAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCS 630

Query: 840 CSDFW 844
           C D+W
Sbjct: 631 CRDYW 635



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 174/423 (41%), Gaps = 93/423 (21%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           + +V   N LI  Y  CGDI    RVF++M  ++ V+W S++ A A++    E     FE
Sbjct: 38  NNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFE 97

Query: 230 MVEEGIKPNSVT----MVC---------------------------VISACAKLQNLELG 258
            + +   PN+V+    + C                           +ISA A++  +   
Sbjct: 98  KIPQ---PNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEA 154

Query: 259 DRVCAYIDELGMKANALMVN---------------------------ALVDMYMKCGAVD 291
            R+ + + E    + + MV+                           A++  YMK G V+
Sbjct: 155 RRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVE 214

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A++LF E   R LV  N +++ YV  G A + L +   ML  G +P+ +++ S +   +
Sbjct: 215 LAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCS 274

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            L  L  G+  H  V +  L    +   +++ MY KCG  + A  +F  +  K VV WN+
Sbjct: 275 NLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNA 334

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           +I+G  ++G  + A  +F EM                                 E +K D
Sbjct: 335 MISGYAQHGAGKKALRLFDEMK-------------------------------KEGLKPD 363

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVF 530
            +T V V  AC + G +DL    +  + ++ GI    +    +VD+  R G    A+ + 
Sbjct: 364 WITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLI 423

Query: 531 RRM 533
           + M
Sbjct: 424 KSM 426



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 21/306 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG--- 162
           +N++I   + +GL  EA  L      F  +P+K         C   SA   G    G   
Sbjct: 138 WNTMISALAQVGLMGEARRL------FSAMPEK--------NCVSWSAMVSGYVACGDLD 183

Query: 163 AIVKMGFD---RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           A V+  +    R V     +I  Y + G +    R+F EMS R +V+W ++I        
Sbjct: 184 AAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGR 243

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            ++ + LF  M+E G+KPN++++  V+  C+ L  L+LG +V   + +  + ++     +
Sbjct: 244 AEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTS 303

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           LV MY KCG +  A +LF +   +++V  N ++S Y + G  ++AL + DEM   G +PD
Sbjct: 304 LVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPD 363

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIF 398
            +T ++ + A    G +  G      + R+ G+E        M+D+  + GK   A  + 
Sbjct: 364 WITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLI 423

Query: 399 DHMSNK 404
             M  K
Sbjct: 424 KSMPFK 429



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 1/196 (0%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           TL  +N++I GY   G   + + L+  +   G+ P+  +   VL  C+  SA   G QVH
Sbjct: 227 TLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVH 286

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             + K     D      L++ Y +CGD+ D   +F ++  ++VV W ++I   A+    K
Sbjct: 287 QLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGK 346

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNAL 280
           +A+ LF EM +EG+KP+ +T V V+ AC     ++LG +    +  + G++        +
Sbjct: 347 KALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACM 406

Query: 281 VDMYMKCGAVDTAKQL 296
           VD+  + G +  A  L
Sbjct: 407 VDLLGRAGKLSEAVDL 422



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 125/309 (40%), Gaps = 57/309 (18%)

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE-NMFEEAMEL 459
            +N  V++ N LIA  ++ GD++SA  VF +M  +  ++WN++L    ++   FE A +L
Sbjct: 36  FNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQL 95

Query: 460 FRVMLSERIKVDRVTM------VGVASACGYLGAL---DLAKW----------------- 493
           F  +         + +      +GV  A G+  ++   D+A W                 
Sbjct: 96  FEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEAR 155

Query: 494 --IYAYIEKNGIHCDMQLA--------------------------TALVDMFARCGDPQR 525
               A  EKN +     ++                          TA++  + + G  + 
Sbjct: 156 RLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVEL 215

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A ++F+ M  R +  W A I      G  E  + LF  ML  G+KP+++    VL  CS+
Sbjct: 216 AERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSN 275

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
              +  G  + + +     +S        +V +  + G L +A +L   +P   + V W 
Sbjct: 276 LSALQLGKQVHQLVCKC-PLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP-RKDVVCWN 333

Query: 646 SLLAACQKH 654
           ++++   +H
Sbjct: 334 AMISGYAQH 342


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 370/687 (53%), Gaps = 61/687 (8%)

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE--GIKPNSVTMVCVISA 248
           +  RVFD    R++ +WTS+I  CAR     + +  F EM++E     PN+  +  V+  
Sbjct: 76  NAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRC 135

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK-------------- 294
           CA L ++E G R+  +I   G+  + ++ NA++DMY KCG    A+              
Sbjct: 136 CAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSW 195

Query: 295 -----------------QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
                            QLF E   R++   NTI+S  +R G   EAL  L +M+  G  
Sbjct: 196 NIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVT 255

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
               T     + +  L     GR  HG V+   LE    +  +++DMY KCG+ E A  I
Sbjct: 256 FSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSI 315

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD  S+                         F+E       +W+TM+ G  Q    EEA+
Sbjct: 316 FDRWSD-------------------------FTE---DRQFAWSTMVAGYVQNGREEEAL 347

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           E FR ML E +   +  +  VASAC   G ++  + ++ ++EK G   D  LA+A+VDM+
Sbjct: 348 EFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMY 407

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           ++ G  + A ++FR  + ++V+ WT  + + A  G G  A+E+F+ M  + I P+ I  V
Sbjct: 408 SKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLV 467

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            VL+ACSH GLV+ G+H F  M + +G+ P   HY CMVDL GRAGLL +A + I+   +
Sbjct: 468 AVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKI 527

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
               V+W +LL+AC+ H++++ A  A+E++ +L+   +G +VL+SN+YA+  KW +  ++
Sbjct: 528 SHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKL 587

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  MKE+ +RK PG S I +   VH F + D SHP    I + L ++  RL++ GY    
Sbjct: 588 RSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRT 647

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
             V+ D++E++++  L  HSEKLA+AFG+IST     +R+ KNLR+C DCH   K +++ 
Sbjct: 648 DLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRA 707

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DREI+VRD  RFH F+ G CSC DFW
Sbjct: 708 TDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 218/525 (41%), Gaps = 72/525 (13%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG--FGILPDKFTFPFVLNACT 149
           + + D   + +L  + S+I G +  G   + +  + E+        P+ F    VL  C 
Sbjct: 78  HRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCA 137

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR--------------- 194
                  G ++HG I++ G   DV + N +++ Y +CGD    RR               
Sbjct: 138 GLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNI 197

Query: 195 ----------------VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
                           +FDE S R+V SW +++    R     EA+    +MV  G+  +
Sbjct: 198 VIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFS 257

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           + T   V +    L + +LG ++   +    ++ +A +  +L+DMY KCG +++A  +F 
Sbjct: 258 NYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFD 317

Query: 299 E----CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
                 +DR     +T+++ YV+ G   EAL     ML  G    +  + S  SA A  G
Sbjct: 318 RWSDFTEDRQFAW-STMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAG 376

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            +  GR  HG+V + G      + + ++DMY K G  E ACRIF     K V  W +++ 
Sbjct: 377 MVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLC 436

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
               +G    A E+FS M                                +E+I  + +T
Sbjct: 437 SYASHGQGRMALEIFSRMK-------------------------------AEKIMPNEIT 465

Query: 475 MVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           +V V SAC + G + D   +     E+ GI  + +    +VD++ R G   +A       
Sbjct: 466 LVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEEN 525

Query: 534 E-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           +   +   W   + A  +  + E A +L +E L Q  + D+  +V
Sbjct: 526 KISHEAVVWKTLLSACRLHKHIEYA-QLASEKLVQLEQYDAGSYV 569



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 10/244 (4%)

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
           C C +M +  S+      FD +   + T    F +++++ GY   G   EA+  +  +  
Sbjct: 304 CKCGEMESALSI------FDRW--SDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLR 355

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G+   +F    V +AC  +    +G QVHG + K+G   D  + + +++ Y + G + D
Sbjct: 356 EGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLED 415

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
             R+F     +NV  WT+++C+ A     + A+ +F  M  E I PN +T+V V+SAC+ 
Sbjct: 416 ACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSH 475

Query: 252 LQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK-DRNLVLCN 309
              +  G      + +E G+  N    N +VD+Y + G +D AK    E K     V+  
Sbjct: 476 SGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWK 535

Query: 310 TIMS 313
           T++S
Sbjct: 536 TLLS 539


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/715 (34%), Positives = 385/715 (53%), Gaps = 41/715 (5%)

Query: 133  GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCLINFYGECGDIVD 191
            GI P+K +F  +LNAC+ S A   G ++H  I+    D  +  V   L++ YG+CG I +
Sbjct: 432  GIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISE 491

Query: 192  GRRVFDEMS--ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
               VF EM    R++V+W  ++ A A+ D  KEA     EM++ G+ P++++   V+S+C
Sbjct: 492  AELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551

Query: 250  AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
               Q  ++  R+C  I E G + +A +  AL+ M+ +C  ++ A+ +F E    ++V   
Sbjct: 552  YCSQEAQV-LRMC--ILESGYR-SACLETALISMHGRCRELEQARSVFNEMDHGDVVSWT 607

Query: 310  TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
             ++S        +E   +   M L G  PD+ T+ + +        L  G++ H  V   
Sbjct: 608  AMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEI 667

Query: 370  GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            GLE   ++ N +++MY  CG                               D   A   F
Sbjct: 668  GLEADIAVENALLNMYSNCG-------------------------------DWREALSFF 696

Query: 430  SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
              M  RD +SWN M     Q  + +EA+ LFR M  E +K D++T     +  G    + 
Sbjct: 697  ETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVS 756

Query: 490  LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
              K  +A   ++G+  D+ +AT LV ++A+CG    AM +FR      V    A IGA+A
Sbjct: 757  DGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALA 816

Query: 550  MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
              G  E+AV++F +M ++G++PD    V +++AC H G+V +G   F +M +  G+SP +
Sbjct: 817  QHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTL 876

Query: 610  VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
             HY C VDLLGRAG L  A  +I+ MP E N ++W SLL  C+   + ++    A+RI E
Sbjct: 877  EHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILE 936

Query: 670  LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
            LDP  S  HV+LSNIY + GKW +    R +M ++ ++  PG S  E+  +VHEF +GD 
Sbjct: 937  LDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDR 996

Query: 730  SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
            SHP+ + I  +L ++   +R AGY  D     LDV+++ K+  L +HSE++A+AFGLI+T
Sbjct: 997  SHPKTDEIYVVLDKLELLMRRAGYEADKG---LDVEDELKEKALGYHSERIAIAFGLIAT 1053

Query: 790  SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
                 +++VKNLR+C DCH+  K +S V  REIIVRD+ RFH F  G+CSC D W
Sbjct: 1054 PPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 168/612 (27%), Positives = 291/612 (47%), Gaps = 55/612 (8%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L +C  S+   +G   H  I   G ++ +F+ NCLIN Y  CG + +   +F +M 
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGD 259
           ERNVVSWT+LI A A+      A  LF  M +E    PNS T+V +++ACA  ++L +G 
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 260 RVCAYIDELGMK----ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
            + A I ELG++       L+ NA+++MY KCG+++ A  +F    ++++V    +   Y
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207

Query: 316 VR-LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
            +      +AL I  EMLL    P+ +T ++A+ A   L D   G   H  +    L G+
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEASL-GF 263

Query: 375 DSIC-NTMIDMYMKCGKQEMACRIFDHMSNKT---VVSWNSLIAGLIKNGDVESAREVFS 430
           D +  N +I+MY KCG  E A  +F  M+++    +VSWN++I     +  VE+ R    
Sbjct: 264 DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMI-----SASVEAGRH--- 315

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA-LD 489
                                   +AM +FR +  E ++ + VT++ + +A    G    
Sbjct: 316 -----------------------GDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG 352

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAM 548
            A+  +  I ++G   D+ +  A++ M+A+CG    A  VFRR+  K DV +W   +GA 
Sbjct: 353 AARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGAS 412

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
               +  + V  F+ ML  GI P+ + F+ +L ACS+   ++ G  +   +        +
Sbjct: 413 EDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAERI 667
                 +V + G+ G + EA  + K MP+    ++ W  +L A  ++     A  A   +
Sbjct: 473 SSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532

Query: 668 TE--LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS-IEVNGKVHEF 724
            +  + P+      +LS+ Y S         +R+ + E G R     ++ I ++G+  E 
Sbjct: 533 LQGGVLPDALSFTSVLSSCYCS----QEAQVLRMCILESGYRSACLETALISMHGRCREL 588

Query: 725 TSGDESHPEMNN 736
                   EM++
Sbjct: 589 EQARSVFNEMDH 600



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 264/599 (44%), Gaps = 77/599 (12%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR----DVFVENCLINFYGECGDIVD 191
           P+ +T   +LNAC  S     G  +H  I ++G +R       V N +IN Y +CG + D
Sbjct: 125 PNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLED 184

Query: 192 GRRVFDEMSERNVVSWTSLICACA--RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
              VF  + E++VVSWT++  A A  RR  P +A+ +F EM+ + + PN +T +  + AC
Sbjct: 185 AIAVFLAIPEKDVVSWTAMAGAYAQERRFYP-DALRIFREMLLQPLAPNVITFITALGAC 243

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR---NLV 306
             L++   G  + + + E  +  + L  NAL++MY KCG  + A  +F     R   +LV
Sbjct: 244 TSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLV 300

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG-DLLCGRMCHGY 365
             N ++S  V  G   +A+AI   + L G RP+ VT+++ ++A A  G D    R  HG 
Sbjct: 301 SWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGR 360

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +  +G      I N +I MY KCG    A  +F  +  K                     
Sbjct: 361 IWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKC-------------------- 400

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                     D ISWNTMLG       F + +  F  ML   I  ++V+ + + +AC   
Sbjct: 401 ----------DVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNS 450

Query: 486 GALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM--EKRDVSAWT 542
            ALD  + I++ I  +   + +  +AT LV M+ +CG    A  VF+ M    R +  W 
Sbjct: 451 EALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWN 510

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG--------LVNQGWH 594
             +GA A     ++A     EML+ G+ PD++ F  VL++C            ++  G+ 
Sbjct: 511 VMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYR 570

Query: 595 ---LFRSMTDIHGVSPQ---------------IVHYGCMVDLLGRAGLLGEALDLIKSMP 636
              L  ++  +HG   +               +V +  MV          E  +L + M 
Sbjct: 571 SACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQ 630

Query: 637 VE---PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS-GVHVLLSNIYASAGKW 691
           +E   P+     + L  C     + +       +TE+  E    V   L N+Y++ G W
Sbjct: 631 LEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDW 689



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 254/546 (46%), Gaps = 49/546 (8%)

Query: 17  VTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCT 73
           V T  +   A   P     I  L  C     L   ++ H  IL +    +  Y+   V T
Sbjct: 422 VNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTR----RRDYVESSVAT 477

Query: 74  --CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
              +  G   S++ A+  F    +    S +L  +N ++  Y+      EA    +E+  
Sbjct: 478 MLVSMYGKCGSISEAELVFK---EMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ 534

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G+LPD  +F  VL++C  S    E   +   I++ G+ R   +E  LI+ +G C ++  
Sbjct: 535 GGVLPDALSFTSVLSSCYCSQ---EAQVLRMCILESGY-RSACLETALISMHGRCRELEQ 590

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R VF+EM   +VVSWT+++ A A     KE   LF  M  EG+ P+  T+   +  C  
Sbjct: 591 ARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLA 650

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
              L LG  + A + E+G++A+  + NAL++MY  CG    A   F   K R+LV  N +
Sbjct: 651 STTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIM 710

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
            + Y + GLA+EA+ +  +M L G +PD++T  + ++ S     +  G++ H     +GL
Sbjct: 711 SAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGL 770

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           +   S+   ++ +Y KCGK + A  +F    + TVV  N++I  L ++G        FS 
Sbjct: 771 DSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHG--------FS- 821

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                                 EEA+++F  M  E ++ D  T+V + SACG+ G ++  
Sbjct: 822 ----------------------EEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG 859

Query: 492 KWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMA 549
              +  + E  GI   ++     VD+  R G  + A Q+ R+M   D +  WT+ +G   
Sbjct: 860 CSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCK 919

Query: 550 MEGNGE 555
           ++G+ E
Sbjct: 920 LQGDAE 925


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/721 (33%), Positives = 395/721 (54%), Gaps = 56/721 (7%)

Query: 160  VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
            +H   VK G  + +   N L+  Y +  ++   R++FDE+ +RN  +WT LI   +R   
Sbjct: 311  LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 220  PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             +    LF EM  +G  PN  T+  +   C+   NL+LG  V A++   G+ A+ ++ N+
Sbjct: 371  SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430

Query: 280  LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
            ++D+Y+KC   + A+++F    + ++V  N ++S Y+R G   ++L    +M    P  D
Sbjct: 431  ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSL----DMFRRLPYKD 486

Query: 340  RVTMLSAVSASAQLG-------DLLC----------------------------GRMCHG 364
             V+  + V    Q G        L C                            GR  HG
Sbjct: 487  VVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHG 546

Query: 365  YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE- 423
             VL+ G      I +++++MY KCG+          M N ++V    +    +KNG+   
Sbjct: 547  MVLKFGFCRDGFIRSSLVEMYCKCGR----------MDNASIV-LKDVPLDFLKNGNAGV 595

Query: 424  SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
            + +E+ + +     +SW  M+ G      +E+ ++ FR+M+ E + VD  T+  + SAC 
Sbjct: 596  TCKELKAGI-----VSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACA 650

Query: 484  YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
              G L+  + ++AY  K G   D  + ++L+DM+++ G    A  +FR+  + ++  WT+
Sbjct: 651  NAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTS 710

Query: 544  AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
             I   A+ G G+QA+ LF EML QGI P+ + F+GVL AC H GL+ +G   FR M D +
Sbjct: 711  MISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAY 770

Query: 604  GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
             ++P + H   MVDL GRAG L E  + I    +     +W S L++C+ H+NV++  + 
Sbjct: 771  CINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWV 830

Query: 664  AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
            +E + ++ P   G +VLLSN+ AS  +W   ARVR  M ++GI+K PG S I++  ++H 
Sbjct: 831  SEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHT 890

Query: 724  FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
            F  GD SHP+   I S L  +  RL++ GY  D+  V+ DV+E++ + L+SHHSEKLA+ 
Sbjct: 891  FIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVV 950

Query: 784  FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
            FG+I+T+   PIR++KNLR+C DCH+F K  S++ DREII+RD +RFH F+ G CSC D+
Sbjct: 951  FGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDY 1010

Query: 844  W 844
            W
Sbjct: 1011 W 1011



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 237/579 (40%), Gaps = 93/579 (16%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           ++ +A+K FD   + N  + T+     LI G+S  G       L+ E+   G  P+++T 
Sbjct: 339 NMDHARKLFDEIPQRNTQTWTI-----LISGFSRAGSSEVVFKLFREMRAKGACPNQYTL 393

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +   C+       G  VH  +++ G D DV + N +++ Y +C       RVF+ M+E
Sbjct: 394 SSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNE 453

Query: 202 RNVVSWTSLICACAR-----------RDLP--------------------KEAVYLFFEM 230
            +VVSW  +I A  R           R LP                    ++A+   + M
Sbjct: 454 GDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCM 513

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
           VE G + + VT    +   + L  +ELG ++   + + G   +  + ++LV+MY KCG +
Sbjct: 514 VECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRM 573

Query: 291 DTAKQLFGE--------------CKD--RNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           D A  +  +              CK+    +V    ++S YV  G   + L     M+  
Sbjct: 574 DNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRE 633

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
               D  T+ + +SA A  G L  GR  H Y  + G      + +++IDMY K G  + A
Sbjct: 634 LVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDA 693

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
             IF   +   +V W S+I+G   +G                                 +
Sbjct: 694 WTIFRQTNEPNIVFWTSMISGCALHGQG-------------------------------K 722

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATAL 513
           +A+ LF  ML++ I  + VT +GV +AC + G L+   ++     +   I+  ++  T++
Sbjct: 723 QAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSM 782

Query: 514 VDMFARCGDPQRAMQ-VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           VD++ R G        +F        S W + + +  +  N E   +  +EML Q    D
Sbjct: 783 VDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMG-KWVSEMLLQVAPSD 841

Query: 573 SIVFVGVLTACSHGGLVNQGWH---LFRSMTDIHGVSPQ 608
              +V +   C+     N  W      RS+    G+  Q
Sbjct: 842 PGAYVLLSNMCAS----NHRWDEAARVRSLMHQRGIKKQ 876



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 140/325 (43%), Gaps = 25/325 (7%)

Query: 49  KQPHCHILKQGL---GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN------ET 99
           +Q H  +LK G    G   S + ++ C C +M    S+       D+    N      E 
Sbjct: 542 RQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDN-ASIVLKDVPLDFLKNGNAGVTCKEL 600

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
            A +  +  ++ GY   G   + +  +  +    ++ D  T   +++AC  +     G  
Sbjct: 601 KAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRH 660

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           VH    K+G   D +V + LI+ Y + G + D   +F + +E N+V WTS+I  CA    
Sbjct: 661 VHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQ 720

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN- 278
            K+A+ LF EM+ +GI PN VT + V++AC     LE G   C Y     M  +A  +N 
Sbjct: 721 GKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEG---CRYFR---MMKDAYCINP 774

Query: 279 ------ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
                 ++VD+Y + G +   K    E    +L        +  RL    E    + EML
Sbjct: 775 GVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEML 834

Query: 333 LH-GPR-PDRVTMLSAVSASAQLGD 355
           L   P  P    +LS + AS    D
Sbjct: 835 LQVAPSDPGAYVLLSNMCASNHRWD 859


>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
 gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
          Length = 698

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/702 (36%), Positives = 399/702 (56%), Gaps = 45/702 (6%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSV 240
           Y +CG + D R VFD M  RN  SW  +I A       +EA+ L+  +V     I+ ++ 
Sbjct: 2   YRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAF 61

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
               V++ACA+L+ LE G  +   I + G+K +  + NALV MY KCG +D AKQ+F   
Sbjct: 62  IFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRI 121

Query: 301 KDRNLV------------------------------LC-NTIMSNYVRLGLAREALAILD 329
             R++V                              LC +T++S     G  REAL +  
Sbjct: 122 THRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYR 181

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           EM+L   RP+  T+ + ++A  +LGDL  G +     +++GL+    +  T++++Y + G
Sbjct: 182 EMIL-SVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFG 240

Query: 390 KQEMACR--IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
              +A R  +FD M ++TVVSWN+++    +N  V+ A ++F EMP +  ISWN M+ G 
Sbjct: 241 -DVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGF 299

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
            Q    ++A+ELFR M  E ++  R+T   V  AC  L A  L ++I   +++  +  D+
Sbjct: 300 GQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMDE-ALAKDI 358

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            +A ++ +M+ +CG P+ A Q F  M  RDV +WTA I A +  G   +A+++F  M++ 
Sbjct: 359 SVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRIMVQA 418

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT--DIHGVSPQIVHYGCMVDLLGRAGLL 625
           G++P+ I  +  L+ACSHG L ++G  +F S+   D +GV+    H+ C +DLLGRAG L
Sbjct: 419 GVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGYL 478

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP---EKSGVHVLLS 682
            +A  LI  MP +   V W SLL+AC+  +++  A   A  + ELD    +    +V+LS
Sbjct: 479 KDAETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPYVMLS 538

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           NIYASAG      ++R Q++ +  +KLPG S+I + G+ +EF S DE+HP  ++  + LR
Sbjct: 539 NIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNELR 598

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
            +  ++++AGYVPD     ++ +E E+   LS+HSEKLA+AFG+++T     + +VKNLR
Sbjct: 599 RLFQKMKEAGYVPDTRIAEMEEEETEQS--LSYHSEKLALAFGVLNTPPEASLCIVKNLR 656

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH+  K +SK  +R+I VRD  RFH F  G CSC D W
Sbjct: 657 VCSDCHNVIKFLSKHLNRKIAVRDATRFHHFENGFCSCRDCW 698



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 232/534 (43%), Gaps = 107/534 (20%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFT 140
           L  A+  FD     NE     F +  +I  Y   G   EA+ LY  L  +   I  D F 
Sbjct: 8   LEDARAVFDSMPLRNE-----FSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAFI 62

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  VL AC +     +G+++H  IVK G  +DV ++N L+  Y +CG I   ++VFD ++
Sbjct: 63  FSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRIT 122

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEE--------------------------- 233
            R+VVSW +++ A A     + A+ ++ EMV                             
Sbjct: 123 HRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYRE 182

Query: 234 ---GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG-- 288
               ++PN+ T+  V++AC +L +L  G  V     + G+  +A++   LV++Y + G  
Sbjct: 183 MILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDV 242

Query: 289 ------------------------------AVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
                                          VD A++LF E  D++++  N +++ + + 
Sbjct: 243 IAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQN 302

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-MCHGYVLRNGLEGWDSI 377
           G  ++AL +   M L G +P R+T  S + A A L     GR +C G  +   L    S+
Sbjct: 303 GRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDG--MDEALAKDISV 360

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N++ +MY KCG  E+A + F  M+ + VVSW ++IA   +NG                 
Sbjct: 361 ANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNG----------------- 403

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                            EA+++FR+M+   ++ + +T++   SAC +    D    I++ 
Sbjct: 404 --------------YSSEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSS 449

Query: 498 I---EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
           +   +  G+  +       +D+  R G  + A  +  +M  K    AWT+ + A
Sbjct: 450 LVSGDYYGVTANESHFLCAIDLLGRAGYLKDAETLITKMPFKAGAVAWTSLLSA 503



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 171/338 (50%), Gaps = 9/338 (2%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP--RPDR 340
           MY  CG ++ A+ +F     RN      I+S YV  G  +EAL +   ++      + D 
Sbjct: 1   MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
               S ++A A+L  L  G   H  +++ G++    + N ++ MY KCG+ + A ++FD 
Sbjct: 61  FIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDR 120

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           ++++ VVSWN++++   + G +E A +++ EM   D + W+TM+          EA+EL+
Sbjct: 121 ITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELY 180

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
           R M+   ++ +  T+  V +AC  LG L     +     ++G+  D  + T LV+++AR 
Sbjct: 181 REMILS-VRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARF 239

Query: 521 GDPQRAMQV-FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           GD   A +V F  M+ R V +W A + A A     ++A +LF EM  + +    I +  +
Sbjct: 240 GDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSV----ISWNAM 295

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +      G   Q   LFR M D+ G+ P  + Y  ++D
Sbjct: 296 IAGFGQNGRPKQALELFRRM-DLEGLQPSRMTYCSVLD 332


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/609 (37%), Positives = 351/609 (57%), Gaps = 32/609 (5%)

Query: 237 PNSVTMVCVISACAKLQN-LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           P+ +T    + + ++L + L  G+++ A   +L    N  ++ +L+ +Y +CG +  A++
Sbjct: 68  PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F E    + V    +++ Y+  G  REA+ +      +G RPD  T +  ++A A++ D
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L  G        + G+     +    +D+Y+KCG  EMA                     
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCG--EMA--------------------- 224

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
                    AREVF +M  +D ++W  M+GG        EA++LF  M +E ++ D   +
Sbjct: 225 --------KAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAV 276

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
            G  SAC  LGALDL +     ++ +    +  L TAL+DM+A+CG    A  VF++M K
Sbjct: 277 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRK 336

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
           +D+  W A I  + M G+ + A  L  +M + G+K +   F+G+L +C+H GL+  G   
Sbjct: 337 KDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 396

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           F +MT ++ +SP+I HYGC+VDLL RAGLL EA  LI  MP+  N VI G+LL  C+ H+
Sbjct: 397 FHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHR 456

Query: 656 NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
           N ++A +   ++  L+P  SG +V+LSNIY++ G+W + A++RL MKE+G+ K+P  S +
Sbjct: 457 NAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWV 516

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           E  GKVHEF  GD+SHP  + I   L E+   ++  GY P    V+ DV+++EK++ L H
Sbjct: 517 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVH 576

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+AF L+ T     IRV KNLR+C DCH+  KL+S++  REIIVRDNNRFH FR 
Sbjct: 577 HSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRD 636

Query: 836 GSCSCSDFW 844
           GSCSC+D+W
Sbjct: 637 GSCSCNDYW 645



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 200/440 (45%), Gaps = 46/440 (10%)

Query: 136 PDKFTFPFVLNACTK-SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           P   TFP  L + ++       G Q+H   +K+    +  V   L+  Y  CG +   +R
Sbjct: 68  PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFDEM   + VSWT+LI A       +EAV++       G++P+S T V V++ACA++ +
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G+ V    ++ G+  +  +  A VD+Y+KCG +  A+++F + +D++ V    ++  
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 247

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y   G  REAL +   M   G RPD   +  A+SA  +LG L  GR     V       W
Sbjct: 248 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMV------DW 301

Query: 375 DSICN------TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           D   +       +IDMY KCG    A  +F  M  K ++ WN++I GL   G  ++A   
Sbjct: 302 DEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA--- 358

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
                        T++G + +                  +K++  T +G+  +C + G +
Sbjct: 359 ------------FTLIGQMEKSG----------------VKLNDNTFIGLLCSCTHTGLI 390

Query: 489 -DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIG 546
            D  ++ +   +   I   ++    +VD+ +R G  Q A Q+   M    +     A +G
Sbjct: 391 QDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLG 450

Query: 547 AMAMEGNGEQAVELFNEMLR 566
              +  N E A  +  +++R
Sbjct: 451 GCKIHRNAELAEHVLTQLIR 470



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 179/390 (45%), Gaps = 18/390 (4%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H   LK      P  ++ ++   A+ G    L  AQ+ FD     +  S     + +
Sbjct: 91  EQLHARSLKLPSHTNPHVLTSLLTLYARCGL---LHRAQRVFDEMPHPSTVS-----WTA 142

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI  Y   G   EA+ +       G+ PD FT   VL AC + +    G  V  A  + G
Sbjct: 143 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEG 202

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
             + VFV    ++ Y +CG++   R VFD+M +++ V+W +++   A    P+EA+ LF 
Sbjct: 203 IAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFL 262

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M  EG++P+   +   +SAC +L  L+LG +    +D      N ++  AL+DMY KCG
Sbjct: 263 AMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCG 322

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +   A  +F + + +++++ N ++      G  + A  ++ +M   G + +  T +  + 
Sbjct: 323 STAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLC 382

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           +    G +  GR     M   Y +   +E +  I    +D+  + G  + A ++ D M  
Sbjct: 383 SCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCI----VDLLSRAGLLQEAHQLIDDMPM 438

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               V   +L+ G   + + E A  V +++
Sbjct: 439 PANAVILGALLGGCKIHRNAELAEHVLTQL 468


>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
 gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/558 (38%), Positives = 336/558 (60%), Gaps = 32/558 (5%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G++D A  +F +         NT++  YV +     AL +  EML  G   D  T  +  
Sbjct: 33  GSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALF 92

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A A L  +  G   HGY+ + GLEG   + N++I+MY KCGK E++C            
Sbjct: 93  KACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSC------------ 140

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE- 466
                               VF  M  RD  SW+ ++       M+ E + +F  M  E 
Sbjct: 141 -------------------SVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREG 181

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
             + +   +V V SAC +LGALDL +  +  + +N    ++ + T+L+DM+ +CG  ++ 
Sbjct: 182 SCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKG 241

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
           + +F+RM K++  +++  I  +AM G G +A+++F++ML +G+KPD +V++GVL+AC+H 
Sbjct: 242 LSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHA 301

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GLV++G   F  M   HG+ P I HYGC+V L+GRAG+L +AL+ I+SMP++PN+V+W  
Sbjct: 302 GLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRG 361

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL+AC+ H N++I   AA+ + EL+    G +V+LSN+YA A +W +VA++R +M  +G 
Sbjct: 362 LLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGF 421

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            + PG S ++V  K+++F S D SHP+   +  M+ +M  +L+  GY PD + VL DVDE
Sbjct: 422 TQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDE 481

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EK+  L  HS+KLAMAF LI TS+  PIR+ +NLR+C DCH++ KL+S +Y REI VRD
Sbjct: 482 EEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREITVRD 541

Query: 827 NNRFHFFRQGSCSCSDFW 844
            NRFH F+ G+CSC D+W
Sbjct: 542 RNRFHHFKDGTCSCRDYW 559



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 174/333 (52%), Gaps = 17/333 (5%)

Query: 45  LNELKQPHCHILKQGLGHKPSY-ISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           + E KQ H  +LK     + S+  S +V TCA +  + S+ YA   F    +  +   T 
Sbjct: 1   MEEFKQVHAQVLKW----ENSFCASNLVATCA-LSDWGSMDYACSIF----RQIDQPGT- 50

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F +N++IRGY  +     A+ LY E+   G+  D FT+P +  AC    +  EG+Q+HG 
Sbjct: 51  FEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGY 110

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           I K G + D+FV+N LIN YG+CG I     VF+ M  R+V SW+++I A A   +  E 
Sbjct: 111 IFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSEC 170

Query: 224 VYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG--MKANALMVNAL 280
           + +F EM  EG  +P    +V V+SAC  L  L+LG   C ++  L    + N ++  +L
Sbjct: 171 LSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGR--CTHVTLLRNIREMNVIVQTSL 228

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           +DMY+KCG ++    LF     +N +  + +++     G   EAL +  +ML  G +PD 
Sbjct: 229 IDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDD 288

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYV-LRNGLE 372
           V  L  +SA    G +  G  C   + L +G+E
Sbjct: 289 VVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIE 321



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 206/456 (45%), Gaps = 72/456 (15%)

Query: 156 EGVQVHGAIVKM--GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
           E  QVH  ++K    F     V  C ++ +G          +F ++ +     + ++I  
Sbjct: 3   EFKQVHAQVLKWENSFCASNLVATCALSDWGSMDYACS---IFRQIDQPGTFEFNTMIRG 59

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
                  + A++L++EM+E G++ ++ T   +  ACA L+++E G ++  YI + G++ +
Sbjct: 60  YVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGD 119

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             + N+L++MY KCG ++ +  +F     R++   + I++ +  LG+  E L++  EM  
Sbjct: 120 LFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSR 179

Query: 334 HGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
            G  RP+   ++S +SA   LG L  GR  H  +LRN  E    +  ++IDMY+KCG   
Sbjct: 180 EGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCG--- 236

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
             C                          +E    +F  M  ++ +S++ M+ GL     
Sbjct: 237 --C--------------------------IEKGLSLFQRMVKKNQLSYSVMITGLAMHGR 268

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLAT 511
             EA+++F  ML E +K D V  +GV SAC + G +D     +  ++ ++GI   +Q   
Sbjct: 269 GMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYG 328

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
            +V +  R G   +A++  R M                                   IKP
Sbjct: 329 CIVHLMGRAGMLNKALEHIRSMP----------------------------------IKP 354

Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
           + +V+ G+L+AC     +  G    +S+ +++  +P
Sbjct: 355 NEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNP 390


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/623 (37%), Positives = 361/623 (57%), Gaps = 37/623 (5%)

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            +++ +   P   T   +I +C +  +L  G  +  ++   G   +  +   L++MY + 
Sbjct: 67  LQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSEL 126

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT----M 343
            ++D A+++F + + R + + N +       G  RE L +   M   G   DR T    +
Sbjct: 127 DSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVL 186

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            + V++ A +  LL GR  HG++LR+G EG   I  T++DMY + G    A R+FD    
Sbjct: 187 KACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFD---- 242

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                                      +MP ++ +SW+ M+   ++     EA+ELFR M
Sbjct: 243 ---------------------------QMPVKNVVSWSAMIACYSKNGKPLEALELFRKM 275

Query: 464 LSERIKV--DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           + E   +  + VTMV V  AC  L AL+  K ++ YI + G+   + + +ALV ++ARCG
Sbjct: 276 MLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCG 335

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           + +   +VF RMEKRDV +W + I +  + G G +A+++F EM+ QG+ P  I FV VL 
Sbjct: 336 NLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLG 395

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV +G  LF SM   H + P + HY CMVDLLGRA  L EA  +I  M +EP  
Sbjct: 396 ACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGP 455

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            +WGSLL +C+ H NV++A  A  R+ EL+P  +G +VLL++IYA A  W  V RV++ +
Sbjct: 456 KVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLL 515

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           + +G++K+PG S IE+  K++ F S DE +P++  + ++L +++  +++ GYVPD   VL
Sbjct: 516 EARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVL 575

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            D+D +EK+ ++  HSEKLA+AFGLI++ K   IR+ KNLRLC DCHS  K +SK  +RE
Sbjct: 576 YDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANRE 635

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+VRD NRFH F+ G CSC D+W
Sbjct: 636 ILVRDVNRFHLFQDGVCSCGDYW 658



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 214/404 (52%), Gaps = 21/404 (5%)

Query: 41  NCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +C   N L Q    H H++  G    P   +K++   +++   +S+  A+K FD   K  
Sbjct: 87  SCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSEL---DSIDNARKVFDKTRK-- 141

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE- 156
               T++++N+L R  +  G G E + LY  +   G+  D+FT+ +VL AC  S AF   
Sbjct: 142 ---RTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSL 198

Query: 157 ---GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G ++HG I++ GF+  V +   L++ Y   G +++  RVFD+M  +NVVSW+++I  
Sbjct: 199 LLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIAC 258

Query: 214 CARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
            ++   P EA+ LF +M+ E   + PNSVTMV V+ ACA L  LE G  +  YI   G+ 
Sbjct: 259 YSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLD 318

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           +   +V+ALV +Y +CG ++   ++F   + R++V  N+++S+Y   G  R+A+ I  EM
Sbjct: 319 SILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEM 378

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT--MIDMYMKCG 389
           +  G  P  ++ +S + A +  G +  G++    ++R G + + S+ +   M+D+  +  
Sbjct: 379 IDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVR-GHKIFPSVEHYACMVDLLGRAN 437

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
           + + A +I D M        W SL+     + +VE A    S +
Sbjct: 438 RLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRL 481



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 177/339 (52%), Gaps = 10/339 (2%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P + T+  ++ +CT+ ++  +G+ +H  ++  G D+D F+   LIN Y E   I + R+V
Sbjct: 76  PTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC----AK 251
           FD+  +R +  W +L  A       +E + L+  M   G+  +  T   V+ AC    A 
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +  L  G  +  +I   G + +  ++  L+DMY + G V  A ++F +   +N+V  + +
Sbjct: 196 VSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAM 255

Query: 312 MSNYVRLGLAREALAILDEMLLHGPR--PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++ Y + G   EAL +  +M+L      P+ VTM+S + A A L  L  G++ HGY+LR 
Sbjct: 256 IACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRR 315

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL+    + + ++ +Y +CG  E+  R+F+ M  + VVSWNSLI+    +G    A ++F
Sbjct: 316 GLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIF 375

Query: 430 SEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVML 464
            EM  +      IS+ ++LG  +   + EE   LF  M+
Sbjct: 376 KEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMV 414



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 49/253 (19%)

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N LI  L K G++  A +V S+ P     ++  ++   T++N   + ++L R ++ +   
Sbjct: 51  NPLIQSLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHD--- 107

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
                                           G   D  LAT L++M++       A +V
Sbjct: 108 --------------------------------GSDQDPFLATKLINMYSELDSIDNARKV 135

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC----SH 585
           F +  KR +  W A   A+ + G G + ++L+  M R G+  D   +  VL AC    + 
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195

Query: 586 GGLVNQGW----HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
             L+  G     H+ R     HG    +     ++D+  R G +  A  +   MPV+ N 
Sbjct: 196 VSLLLNGREIHGHILR-----HGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVK-NV 249

Query: 642 VIWGSLLAACQKH 654
           V W +++A   K+
Sbjct: 250 VSWSAMIACYSKN 262


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/680 (36%), Positives = 376/680 (55%), Gaps = 40/680 (5%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D   F  +L+ C KS +  E   VH  I+K  F  ++F++N L++ YG+CG + D R+VF
Sbjct: 18  DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77

Query: 197 DEMSERNVVSWTSLICAC-------------------------------ARRDLPKEAVY 225
           D M +RN  SW +++ A                                A+RD  +EA+ 
Sbjct: 78  DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
              +M  E    N  +    +SACA L +L +G ++   I +     +  M +ALVDMY 
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KC  V +A++ F +   RN+V  N++++ Y + G A +AL +   M+  G  PD +T+ S
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNK 404
             SA A L  +  G   H  V+++     D +  N ++DMY KC +   A  +FD M  +
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VVS  S+++G  K   V++AR +FS M  R+ +SWN ++ G TQ    EEA+ LF ++ 
Sbjct: 318 DVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLK 377

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI------HCDMQLATALVDMFA 518
            E I     T   + +AC  L  L L +  + +I K+G         D+ +  +L+DM+ 
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYM 437

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG  +    VF RM +RD  +W A I   A  G G +A+E+F EML  G +PD +  +G
Sbjct: 438 KCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIG 497

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL+ACSH GLV +G   F+SMT  HG+ P   HY CMVDLLGRAG L EA +LI++MP+E
Sbjct: 498 VLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPME 557

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+ V+WGSLLAAC+ H N+ +  Y AER+ E+DP  SG +VLLSN+YA  G+W +V RVR
Sbjct: 558 PDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVR 617

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
            QM++ G+ K PG S I +   +H F   D+ HP   +I  +L+ +  +++  GYVP+  
Sbjct: 618 KQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEAD 677

Query: 759 NVLLDVDEQEKKYLLSHHSE 778
           +     +E + + +L  HSE
Sbjct: 678 DDEPYEEESDSELIL--HSE 695



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 258/590 (43%), Gaps = 103/590 (17%)

Query: 33  SPSIGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKA 89
           SP    L  C   K++ E +  H  I+K     +    +++V    + G  E    A+K 
Sbjct: 20  SPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLED---ARKV 76

Query: 90  FDYYIKDN-----------------ETSATLFM---------YNSLIRGYSCIGLGVEAI 123
           FD+  + N                 + +  LF          +N+++ G++      EA+
Sbjct: 77  FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
              V++     + ++++F   L+AC        GVQ+HG I K  +  DV++ + L++ Y
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMY 196

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            +C  +   +R FD+M  RN+VSW SLI    +     +A+ +F  M+  GI+P+ +T+ 
Sbjct: 197 SKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLA 256

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMV-NALVDMYMKC--------------- 287
            V SACA L  +  G ++ A + +     N L++ NALVDMY KC               
Sbjct: 257 SVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316

Query: 288 ----------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
                            +V  A+ +F    +RN+V  N +++ Y + G   EA+ +   +
Sbjct: 317 RDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLL 376

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL---EGWDS---ICNTMIDMY 385
                 P   T  + ++A A L DL  GR  H ++L++G     G DS   + N++IDMY
Sbjct: 377 KRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMY 436

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
           MKCG  E    +F+ M  +  VSWN++I G  +NG    A E+F E              
Sbjct: 437 MKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFRE-------------- 482

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIH 504
                            ML    + D VTM+GV SAC + G ++  + +  +   ++G+ 
Sbjct: 483 -----------------MLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLV 525

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
                 T +VD+  R G    A  + + M  + D   W + + A  + GN
Sbjct: 526 PVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGN 575


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/728 (33%), Positives = 386/728 (53%), Gaps = 45/728 (6%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCL 179
           EA     E+   G+    +++  +  AC +  +   G  +H  + +MG +   V ++NC+
Sbjct: 66  EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCV 124

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           +  Y EC  + D  ++FDEMSE N VS T++I A A + +  +AV LF  M+  G KP S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
                ++ +    + L+ G ++ A++   G+ +N  +   +V+MY+KCG +  AK++F +
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
              +  V C  +M  Y + G AR+AL +  +++  G   D       + A A L +L  G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           +  H  V + GLE   S+   ++D Y+KC   E ACR                       
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACR----------------------- 341

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-DRVTMVGV 478
                    F E+   + +SW+ ++ G  Q + FEEA++ F+ + S+   + +  T   +
Sbjct: 342 --------AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC  L   ++   ++A   K  +       +AL+ M+++CG    A +VF  M+  D+
Sbjct: 394 FQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDI 453

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            AWTA I   A  GN  +A+ LF +M+  G+KP+S+ F+ VLTACSH GLV QG H   +
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDT 513

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M   + V+P I HY CM+D+  R+GLL EAL  +K+MP EP+ + W   L+ C  H+N++
Sbjct: 514 MLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLE 573

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +   A E + +LDPE +  +VL  N+Y  AGKW   A +   M E+ ++K    S I+  
Sbjct: 574 LGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEK 633

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           GK+H F  GD+ HP+   I   L+E +  +    +  ++T         E++  L  HSE
Sbjct: 634 GKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMT---------ERREQLLDHSE 684

Query: 779 KLAMAFGLIST--SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           +LA+AFGLIS   +   PI+V KNLR C DCH FAK VS V   EI++RD+ RFH F++G
Sbjct: 685 RLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEG 744

Query: 837 SCSCSDFW 844
            CSC+D+W
Sbjct: 745 KCSCNDYW 752



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 226/499 (45%), Gaps = 40/499 (8%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SL  A K FD   + N  S T     ++I  Y+  G+  +A+ L+  +   G  P    +
Sbjct: 133 SLEDADKLFDEMSELNAVSRT-----TMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY 187

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L +     A   G Q+H  +++ G   +  +E  ++N Y +CG +V  +RVFD+M+ 
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAV 247

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           +  V+ T L+    +    ++A+ LF ++V EG++ +S     V+ ACA L+ L LG ++
Sbjct: 248 KKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQI 307

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A + +LG+++   +   LVD Y+KC + ++A + F E ++ N V  + I+S Y ++   
Sbjct: 308 HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 367

Query: 322 REALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            EA+     +        +  T  S   A + L D   G   H   ++  L G     + 
Sbjct: 368 EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 427

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +I MY KCG  + A  +F+ M N  +V+W + I+G    G+                   
Sbjct: 428 LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA------------------ 469

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW-IYAYIE 499
                         EA+ LF  M+S  +K + VT + V +AC + G ++  K  +   + 
Sbjct: 470 -------------SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLR 516

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAV 558
           K  +   +     ++D++AR G    A++  + M  + D  +W   +       N E   
Sbjct: 517 KYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELG- 575

Query: 559 ELFNEMLRQGIKPDSIVFV 577
           E+  E LRQ    D+  +V
Sbjct: 576 EIAGEELRQLDPEDTAGYV 594



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 19/263 (7%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C +L EL   KQ H  + K GL  + S  + +V    +  +FES   A +AF    +
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES---ACRAFQEIRE 348

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAF 154
            N+ S     ++++I GY  +    EA+  +  L +    + + FT+  +  AC+  +  
Sbjct: 349 PNDVS-----WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G QVH   +K       + E+ LI  Y +CG + D   VF+ M   ++V+WT+ I   
Sbjct: 404 NIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGH 463

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A      EA+ LF +MV  G+KPNSVT + V++AC+    +E G      +D +  K N 
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHC---LDTMLRKYNV 520

Query: 275 LMV----NALVDMYMKCGAVDTA 293
                  + ++D+Y + G +D A
Sbjct: 521 APTIDHYDCMIDIYARSGLLDEA 543



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 64/142 (45%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N  L  L++     EA E  + M    + V   +   +  AC  L +L   + ++  +  
Sbjct: 52  NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
              +  + L   ++ M+  C   + A ++F  M + +  + T  I A A +G  ++AV L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171

Query: 561 FNEMLRQGIKPDSIVFVGVLTA 582
           F+ ML  G KP S ++  +L +
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKS 193


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/666 (35%), Positives = 369/666 (55%), Gaps = 32/666 (4%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           LI  Y   G I   R+VFD+  +  V +W ++I A +RR    EA+ L+  M  EG++P+
Sbjct: 45  LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           S T   V+ AC +  +L  G+       + G   +  +  A++++Y KCG +D A ++F 
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFD 164

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           +   R+LV   T+++   + G AREA+ I  +M       D V ML  + A   LG    
Sbjct: 165 KMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G   HGY++R  +     +  +++DMY K                               
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAK------------------------------- 253

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           NG +E A  VF  M  ++ ISW+ ++ G  Q      A++L   M S   K D V++V V
Sbjct: 254 NGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSV 313

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC  +G L L K ++ YI +  +H D   +TA++DM+++CG    A  VF ++  RD 
Sbjct: 314 LLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDS 372

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W A I +  + G+GE+A+ LF +M    +KPD   F  +L+A SH GLV +G + F  
Sbjct: 373 ISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSI 432

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M + + + P   HY CMVDLL RAG + EA +LI+SM  EP   IW +LL+ C  H    
Sbjct: 433 MVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFL 492

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           I   AA+++ EL+P+  G++ L+SN +A+A +W  VA VR  MK+ G++K+PG S +EVN
Sbjct: 493 IGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVN 552

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           GK+H F   D+SH +   I  +L +++  ++  GYVP    VL +++E+ K+ +L +HSE
Sbjct: 553 GKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSE 612

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           +LA+AFGL++T     + + KNLR+C DCH   K +SK+ +REI+VRD  RFH F+ G C
Sbjct: 613 RLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVC 672

Query: 839 SCSDFW 844
           SC D+W
Sbjct: 673 SCGDYW 678



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 241/462 (52%), Gaps = 33/462 (7%)

Query: 10  LVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISK 69
           LV+ + ++ TL        T KD P+I  +     L  +            GH  S  +K
Sbjct: 3   LVVGSKSLKTLL------ITSKDEPTIAKIHALMILTGI-----------FGHGNSN-AK 44

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++ + A++G  ES   A++ FD           +  +N++I  YS  G   EA+SLY  +
Sbjct: 45  LIQSYARLGHIES---ARQVFD-----KSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRM 96

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
           A  G+ PD  T+  VL ACT+S     G +     V  G+  DVFV   ++N Y +CG +
Sbjct: 97  ASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKM 156

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
            +  RVFD+M  R++V WT++I   A+    +EAV ++ +M ++ ++ + V M+ +I AC
Sbjct: 157 DEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQAC 216

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             L + ++G  +  Y+    +  + ++  +LVDMY K G ++ A  +F     +N++  +
Sbjct: 217 TTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWS 276

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++S + + G A  AL ++ +M   G +PD V+++S + A +Q+G L  G+  HGY++R 
Sbjct: 277 ALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR 336

Query: 370 GLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
               +D + +T +IDMY KCG    A  +FD +S +  +SWN++IA    +G  E A  +
Sbjct: 337 --LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSL 394

Query: 429 FSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           F +M       DH ++ ++L   +   + E+    F +M++E
Sbjct: 395 FLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNE 436



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 6/182 (3%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+A +   GI         L+  +AR G  + A QVF +  +  V AW A I A +  G 
Sbjct: 26  IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGA 85

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
             +A+ L++ M  +G++PDS  +  VL AC+    +  G   +R   D  G    +    
Sbjct: 86  MFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVD-QGYGDDVFVGA 144

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC----QKHQNVDIAAYAAERITE 669
            +++L  + G + EA+ +   M    + V W +++       Q  + VDI     ++  E
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMG-RRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVE 203

Query: 670 LD 671
            D
Sbjct: 204 GD 205


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/579 (42%), Positives = 338/579 (58%), Gaps = 14/579 (2%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECK-----DRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +ALV  +   G  + A +L  E +     + N++  N ++S   R G AR+A+  L  M 
Sbjct: 89  SALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATM- 147

Query: 333 LHGP---RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            HG    RPD   +  A+SA   +G +  G+  HGY ++ G      +   +IDMY KCG
Sbjct: 148 -HGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCG 206

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLG 445
           +     R+FD  S+  V S N+LIAGL +N  V  A  +F E   R    + +SW +++ 
Sbjct: 207 QAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVA 266

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
              Q     EA+E FR M ++  + + VT+  V  A   + AL   +  + +  + G   
Sbjct: 267 CCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLH 326

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D+ +++ALVDM+A+CG  + A  +F  M  R+V +W A IG  AM G    AV +F+ ML
Sbjct: 327 DVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSML 386

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
           +   KPD + F  +L AC+  GL  +G H F+ M + +GVSP++ HY CMV LLGRAG L
Sbjct: 387 KCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKL 446

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
            EA DLI  MP EP+  IWGSLL +C+ H NVD+A  AAE++  L+PE +G +VLLSNIY
Sbjct: 447 DEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIY 506

Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
           AS   W  V RVR  MK+ G++K  G S IE+  KVH   +GD+SHP M  I   + ++N
Sbjct: 507 ASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLN 566

Query: 746 CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
            ++R  G+VP    VL DV+EQEK  +L+ HSEKLA+A GLISTS    +RV+KNLR+C 
Sbjct: 567 IQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICG 626

Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           DCH   K +S    REI VRD NRFH F  G CSC DFW
Sbjct: 627 DCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 160/379 (42%), Gaps = 47/379 (12%)

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSA 153
           +D      +  +N L+ G +  G   +A+     + G G+L PD       L+A      
Sbjct: 113 RDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGL 172

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS------------- 200
              G Q+HG  VK G   D  V   LI+ YG+CG   +  RVFDE S             
Sbjct: 173 VSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAG 232

Query: 201 ----------------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
                                 E NVVSWTS++  C +     EAV  F EM  +G +PN
Sbjct: 233 LSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPN 292

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           SVT+ CV+ A A +  L  G     +    G   +  + +ALVDMY KCG V  A+ +F 
Sbjct: 293 SVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFD 352

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
               RN+V  N ++  Y   G A  A+ +   ML    +PD VT    ++A  Q G    
Sbjct: 353 TMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEE 412

Query: 359 GR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSL 412
           GR     M + Y +   +E +      M+ +  + GK + A  +   M        W SL
Sbjct: 413 GRHYFKEMHNEYGVSPRMEHY----ACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSL 468

Query: 413 IAGLIKNGDVESAREVFSE 431
           +     +G+V+ A EV +E
Sbjct: 469 LGSCRVHGNVDLA-EVAAE 486



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 11/279 (3%)

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS--NKTVVSWNSLI 413
           L   R  H     +GL     + ++++  Y++ G    A  +FD M    +TVV W++L+
Sbjct: 33  LPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALV 92

Query: 414 AGLIKNGDVESAREVFSEMPGRDH------ISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           A     GD E A  +  EM  RD       I+WN ++ GL +     +A+     M  E 
Sbjct: 93  AAHAARGDAEGAWRLLEEMR-RDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEG 151

Query: 468 IKVDRVTMVGVA-SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
           +     T V  A SA G +G + + + ++ Y  K G   D  + TAL+DM+ +CG     
Sbjct: 152 LLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEV 211

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
           ++VF      DV++  A I  ++      +A+ LF E + +G++ + + +  ++  C   
Sbjct: 212 VRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQN 271

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
           G   +    FR M    G  P  V   C++        L
Sbjct: 272 GKDLEAVEFFREM-QAQGTEPNSVTIPCVLPAFANVAAL 309



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 21/256 (8%)

Query: 25  KAKTTPKDSPSIG----SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF 80
           +A+ T  +S +I     +  N   L   +  HC  L++G  H     S +V   A+ G  
Sbjct: 285 QAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRV 344

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
           +    A+  FD  +  N  S     +N++I GY+  G  V A+ ++  +      PD  T
Sbjct: 345 KD---ARIIFDTMVSRNVVS-----WNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVT 396

Query: 141 FPFVLNACTKSSAFGEGVQVHGAI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           F  +L ACT++    EG      +  + G    +    C++   G  G + +   +  +M
Sbjct: 397 FTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDM 456

Query: 200 S-ERNVVSWTSLICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
             E +   W SL+ +C      DL + A    F +  E    N+   V + +  A  +  
Sbjct: 457 PFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPE----NAGNYVLLSNIYASKKMW 512

Query: 256 ELGDRVCAYIDELGMK 271
           +  +RV   + ++G+K
Sbjct: 513 DRVNRVREMMKDVGLK 528


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/632 (36%), Positives = 366/632 (57%), Gaps = 32/632 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++ AC + ++L    ++  +  +    A++ +++ L  +Y+ C  V  A++LF E  + +
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           ++L N I+  Y   G    A+ +   ML  G RP++ T    + A + L  +  G   H 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG--------- 415
           +    GLE    +C  ++D Y KCG    A R+F  MS++ VV+WN++IAG         
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 416 ---LIKNGDVES--------------------AREVFSEMPGRDHISWNTMLGGLTQENM 452
              LI     E                     AR++F  M  R+ +SW+ M+GG    + 
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDC 253

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            +EA+++FR+M    I  D  TM+GV  AC +L AL      + Y+   G   D  +  A
Sbjct: 254 MKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNA 313

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+DM+++CG    A +VF RM++ D+ +W A I    + G G +A+ LF+++L  G+KPD
Sbjct: 314 LIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPD 373

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            I F+ +L++CSH GLV +G   F +M+    + P++ H  CMVD+LGRAGL+ EA   I
Sbjct: 374 DITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI 433

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           ++MP EP+  IW +LL+AC+ H+N+++    +++I  L PE +G  VLLSNIY++AG+W 
Sbjct: 434 RNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWD 493

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
           + A +R+  K+ G++K+PG S IE+NG VH F  GD+SH +++ I+  L E+   ++  G
Sbjct: 494 DAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 553

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y  + + V  DV+E+EK+ +L +HSEKLA+AFG+++     PI V KNLR+C DCH+  K
Sbjct: 554 YQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIK 613

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            ++ +  REI VRD NRFH F+ G+C+C DFW
Sbjct: 614 FMTLITKREITVRDANRFHHFKNGTCNCGDFW 645



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 243/536 (45%), Gaps = 87/536 (16%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVV---CTCAQMGTFESLTYAQKAFDYYIKDNET 99
           K+L E K+ H H LK       S + K+     +C Q      +  A++ FD        
Sbjct: 22  KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQ------VVLARRLFD-----EIP 70

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           + ++ ++N +IR Y+  G    AI LY  +   G+ P+K+T+PFVL AC+   A  +GV+
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H      G + DVFV   L++FY +CG +V+ +R+F  MS R+VV+W ++I  C+   L
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             +AV L  +M EEGI PNS T+V V+  C  L                           
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL--------------------------- 223

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
              +Y        A+++F     RN V  + ++  YV     +EAL I   M L G  PD
Sbjct: 224 ---LY--------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPD 272

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             TML  + A + L  L  G   HGY++  G      ICN +IDMY KCGK   A  +F+
Sbjct: 273 LTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFN 332

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M    +VSWN++I G   +G                       LG         EA+ L
Sbjct: 333 RMDRHDIVSWNAMIIGYGIHG-----------------------LG--------MEALGL 361

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           F  +L+  +K D +T + + S+C + G  ++   W  A      I   M+    +VD+  
Sbjct: 362 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILG 421

Query: 519 RCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           R G    A    R M  + DV  W+A + A  +  N E   E+  ++  Q + P+S
Sbjct: 422 RAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKI--QSLGPES 475



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 55/284 (19%)

Query: 30  PKDSPSIGSLKNCKTLNELKQPHC---HILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  +  +G L  C  L  L+   C   +++ +G        + ++   ++ G    +++A
Sbjct: 271 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCG---KISFA 327

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ F+   + +  S     +N++I GY   GLG+EA+ L+ +L   G+ PD  TF  +L+
Sbjct: 328 REVFNRMDRHDIVS-----WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLS 382

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           +C+ S                                   G +++GR  FD MS    + 
Sbjct: 383 SCSHS-----------------------------------GLVMEGRLWFDAMSRDFSIV 407

Query: 207 WTSLICAC-----ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
                C C      R  L  EA +    M  E   P+      ++SAC   +N+ELG+ V
Sbjct: 408 PRMEHCICMVDILGRAGLIDEAHHFIRNMPFE---PDVRIWSALLSACRIHKNIELGEEV 464

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
              I  LG ++    V  L ++Y   G  D A  +    KD  L
Sbjct: 465 SKKIQSLGPESTGNFV-LLSNIYSAAGRWDDAAHIRITQKDWGL 507


>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera]
 gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/602 (38%), Positives = 353/602 (58%), Gaps = 34/602 (5%)

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM--YMKCGAVDTAKQLFGECKDR 303
           +S   K  N+E   +  A I +LG+  ++   + LV        G++D A  +F +  + 
Sbjct: 35  VSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDEL 94

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
                NT+M  +V+     EAL    EM   G +PD  T  + + A A+L  +  G   H
Sbjct: 95  GSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 154

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
            ++L+ GLE    + N++I MY KCG+  + C                            
Sbjct: 155 AHILKLGLENDVFVQNSLISMYGKCGEIGVCC---------------------------- 186

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI-KVDRVTMVGVASAC 482
               VF +M  R   SW+ ++       M+ + + L   M +E   + +   +V V SAC
Sbjct: 187 ---AVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSAC 243

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
            +LGALDL + ++ ++ +N    ++ + T+L++M+ +CG   + M +F++M K++  +++
Sbjct: 244 THLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYS 303

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
             I  +AM G G + + +F EML QG++PD IV+VGVL ACSH GLV +G   F  M   
Sbjct: 304 VMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLE 363

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           HG+ P I HYGCMVDL+GRAG + EAL+LIKSMP+EPNDV+W SLL+A + H N+     
Sbjct: 364 HGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEI 423

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA+++ +LD +K+  +V+LSN+YA A +W +VA+ R  M  +G+ + PG S +EV  K+H
Sbjct: 424 AAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMH 483

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F S D  HP+  ++  ML +M  +L+  GY PD T VL DVDE+EKK  LS HS+KLA+
Sbjct: 484 RFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAI 543

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           A+ LI TS+  PIR+V+NLR+C DCH++ KL+S ++DREI VRD +RFH F+ G+CSC D
Sbjct: 544 AYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRD 603

Query: 843 FW 844
           +W
Sbjct: 604 YW 605



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 234/464 (50%), Gaps = 22/464 (4%)

Query: 20  LTNQHKAKTTPKDSPSIGS------LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCT 73
           L ++     +P+ S  +G       LK C  + E KQ H  ILK GL       S +V T
Sbjct: 13  LVSREDPPQSPELSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVAT 72

Query: 74  CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
           CA +  + S+ YA   F    + +E  +  F +N+++RG+       EA+  Y E+A  G
Sbjct: 73  CA-LSDWGSMDYACSIFR---QMDELGS--FQFNTMMRGHVKDMNTEEALITYKEMAERG 126

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + PD FT+P +L AC +  A  EG+QVH  I+K+G + DVFV+N LI+ YG+CG+I    
Sbjct: 127 VKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCC 186

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI-KPNSVTMVCVISACAKL 252
            VF++M+ER+V SW++LI A A   +  + + L  +M  EG  +     +V V+SAC  L
Sbjct: 187 AVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHL 246

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             L+LG  V  ++       N ++  +L++MY+KCG++     LF +   +N +  + ++
Sbjct: 247 GALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMI 306

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV-LRNGL 371
           S     G  RE L I  EML  G  PD +  +  ++A +  G +  G  C   + L +G+
Sbjct: 307 SGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGI 366

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAR 426
           E        M+D+  + GK + A  +   M      V W SL++    + +++    +A+
Sbjct: 367 EPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAK 426

Query: 427 EVFS--EMPGRDHISWNTMLGGLTQ-ENMFEEAMELFRVMLSER 467
           ++F        D++  + M     + E++ +    +F   LS+R
Sbjct: 427 QLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQR 470



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 198/414 (47%), Gaps = 46/414 (11%)

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC-----GDIVDGRRVFDEMSERNV 204
           K S   E  Q H  I+K+G   D F   C  N    C     G +     +F +M E   
Sbjct: 40  KCSNMEEFKQSHARILKLGLFGDSF---CASNLVATCALSDWGSMDYACSIFRQMDELGS 96

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
             + +++    +    +EA+  + EM E G+KP++ T   ++ ACA+L  +E G +V A+
Sbjct: 97  FQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAH 156

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           I +LG++ +  + N+L+ MY KCG +     +F +  +R++   + +++ +  LG+  + 
Sbjct: 157 ILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDC 216

Query: 325 LAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MI 382
           L +L +M   G  R +   ++S +SA   LG L  GR  HG++LRN + G + I  T +I
Sbjct: 217 LRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRN-VSGLNVIVETSLI 275

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           +MY+KCG                     SL  G+           +F +M  ++ +S++ 
Sbjct: 276 EMYLKCG---------------------SLYKGMC----------LFQKMAKKNKLSYSV 304

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KN 501
           M+ GL       E + +F  ML + ++ D +  VGV +AC + G +      +  ++ ++
Sbjct: 305 MISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEH 364

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRR--MEKRDVSAWTAAIGAMAMEGN 553
           GI   +Q    +VD+  R G    A+++ +   ME  DV  W + + A  +  N
Sbjct: 365 GIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDV-LWRSLLSASKVHNN 417


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/640 (37%), Positives = 356/640 (55%), Gaps = 35/640 (5%)

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W + +   A+R    +A+ L+ +M+  G +PN+ T    + +CA L    LG +    I 
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNLVLC-NTIMSNYVRLGLAREA 324
           ++G      +   L+ MY K   VD A+++F E    R L +C N ++S YV      +A
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           + +  +M   G   + VT+L  + A     +L  G   H   L+ G +   S+ N  I M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           YMKCG                                V  A+++F EMP +  ISWN M+
Sbjct: 188 YMKCG-------------------------------SVNYAQKLFDEMPVKGLISWNAMV 216

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
            G  Q  +    +EL+R M    +  D VT+VGV S+C  LGA  +   +   ++ +G  
Sbjct: 217 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFT 276

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            +  L  AL++M+ARCG+  +A  VF  M +R + +WTA IG   M G+GE AV+LF EM
Sbjct: 277 SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEM 336

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
           +R GI+PD   FV VL+ACSH GL +QG   F+ M   + + P   HY CMVDLLGRAG 
Sbjct: 337 IRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGR 396

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA  LI+SMP++P+  +WG+LL AC+ H+NV++A  A ER+ EL+PE  G +VLLSNI
Sbjct: 397 LKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNI 456

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           Y++A     V R+R+ MKE+ ++K PG S +E+ G+VH F  GD +H + + I  +L E+
Sbjct: 457 YSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEEL 516

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
              +      P+  N   +   ++    +  HSEKLA+AFGL++T+    + ++KNLR+C
Sbjct: 517 EAIIMQEFGKPEKDN--REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRIC 574

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH F K+VSK+  R++ VRD  RFH FR GSCSC D+W
Sbjct: 575 EDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 227/466 (48%), Gaps = 37/466 (7%)

Query: 120 VEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
           ++A+SLY ++   G  P+ FTFPF L +C   S    G Q HG I K+G   + FV+  L
Sbjct: 22  LQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 81

Query: 180 INFYGECGDIVDGRRVFDE--MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
           I+ Y +   + + R+VF+E   S +  V + +L+          +AV LF +M EEG+  
Sbjct: 82  ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPV 141

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           NSVT++ +I AC    NLELG  +     + G  ++  +VN  + MYMKCG+V+ A++LF
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 201

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
            E   + L+  N ++S Y + GLA   L +   M ++G  PD VT++  +S+ A LG   
Sbjct: 202 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 261

Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
            G      +  +G      + N +I+MY +CG    A  +FD M  +T+VSW ++I G  
Sbjct: 262 VGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG 321

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
            +G  E                                A++LF+ M+   I+ D    V 
Sbjct: 322 MHGHGEI-------------------------------AVQLFKEMIRSGIEPDGTAFVC 350

Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-K 535
           V SAC + G  D     +  +++N  +    +  + +VD+  R G  + A  +   M  K
Sbjct: 351 VLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIK 410

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
            D + W A +GA  +  N E A   F  ++   ++P++I +  +L+
Sbjct: 411 PDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENIGYYVLLS 454



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 12/370 (3%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+L+ GY       +A+ L+ ++   G+  +  T   ++ AC        G  +H + +
Sbjct: 111 YNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL 170

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K GFD DV V NC I  Y +CG +   +++FDEM  + ++SW +++   A+  L    + 
Sbjct: 171 KYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLE 230

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L+  M   G+ P+ VT+V V+S+CA L    +G  V   +   G  +N  + NAL++MY 
Sbjct: 231 LYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYA 290

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           +CG +  A+ +F    +R LV    I+  Y   G    A+ +  EM+  G  PD    + 
Sbjct: 291 RCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVC 350

Query: 346 AVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            +SA +  G    G      M   Y L  G E +    + M+D+  + G+ + A  + + 
Sbjct: 351 VLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHY----SCMVDLLGRAGRLKEAQTLIES 406

Query: 401 MSNKT-VVSWNSLIAGLIKNGDVESAREVFSEMP--GRDHISWNTMLGGLTQENMFEEAM 457
           M  K     W +L+     + +VE A   F  +     ++I +  +L  +       + +
Sbjct: 407 MPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGV 466

Query: 458 ELFRVMLSER 467
              R+M+ E+
Sbjct: 467 LRIRIMMKEK 476


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/605 (36%), Positives = 357/605 (59%), Gaps = 2/605 (0%)

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           +V  + ACA+ Q+  +G ++  +I + G+     + N L++MY KCG +  A  LF +  
Sbjct: 6   LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGR 360
            R+ +   +I++   +  L    L++   M    G +PD       V A A LG +  G+
Sbjct: 66  HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H   + + +   D + ++++DMY KCG  ++   +FD +S+K  +SW ++I+G  ++G
Sbjct: 126 QVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSG 185

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK-VDRVTMVGVA 479
               A ++F +MP ++ +SW  ++ GL Q   + ++  LF  M S+ I  VD   +  + 
Sbjct: 186 RKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSII 245

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
            A   L  L L K I+  +   G    + ++ ALVDM+A+C D   A ++F RM +RD+ 
Sbjct: 246 GASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIV 305

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
           +WT+ I   A  G  E+A+ L+N ML  G+KP+ + FVG++ ACSH GLV++G + F SM
Sbjct: 306 SWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSM 365

Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
              +G++P + HY C++DLL R+G L EA +LIK+MP +P++  W +LL+AC  H+N  I
Sbjct: 366 IKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLI 425

Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
               A+ +  L PE    ++LLSNIYASA  W +V++VR  M    ++K PG S I +  
Sbjct: 426 GIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGK 485

Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEK 779
           +   F +G+ SHP    I  +L E++  ++  GY+PD ++VL D+++QEK+  L  HSE+
Sbjct: 486 ESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSER 545

Query: 780 LAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCS 839
           LA+A+GL+     M + +VKNLR+C DCH+  K +S +  REI+VRD NR+H F+ G CS
Sbjct: 546 LAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCS 605

Query: 840 CSDFW 844
           C++FW
Sbjct: 606 CNNFW 610



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 213/465 (45%), Gaps = 68/465 (14%)

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           + L AC +  +   G ++H  I+K G D+   + N LIN YG+CG I D   +F+++  R
Sbjct: 8   YQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR 67

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           + +SW S++ A  + +LP   + +F  M  ++G++P+     C++ ACA L  ++ G +V
Sbjct: 68  DPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQV 127

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A      +  + ++ ++LVDMY KCG  D  + +F     +N +    ++S Y + G  
Sbjct: 128 HATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRK 187

Query: 322 REALAILDEM----------LLHGPRP----------------------DRVTMLSAVSA 349
            +A+ +  +M          L+ G                         D   + S + A
Sbjct: 188 LDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGA 247

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           SA L  L  G+  H  V+  G E    + N ++DMY KC     A +IF  M  + +VSW
Sbjct: 248 SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSW 307

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            S+I G  ++G                               + EEA+ L+  MLS  +K
Sbjct: 308 TSIIVGTAQHG-------------------------------LAEEALSLYNRMLSTGLK 336

Query: 470 VDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
            + VT VG+  AC ++G +   ++ + + I+  GI+  +Q  T L+D+ +R G  + A  
Sbjct: 337 PNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAEN 396

Query: 529 VFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           + + M  K D + W A + A     N    + + + +L   +KP+
Sbjct: 397 LIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLL--SLKPE 439



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 187/432 (43%), Gaps = 72/432 (16%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K+ HCHI+K G+    S  + ++    + G  +    A   F+     +  S     + S
Sbjct: 23  KKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQD---ALNLFNQLPHRDPIS-----WAS 74

Query: 109 LIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
           ++   +   L    +S++  +    G+ PD + F  ++ AC    A  +G QVH   +  
Sbjct: 75  ILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVS 134

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV--- 224
               D  V++ L++ Y +CG    GR VFD +S +N +SWT++I   A+     +A+   
Sbjct: 135 PVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLF 194

Query: 225 ----------------------------YLFFEMVEEGIK-PNSVTMVCVISACAKLQNL 255
                                       YLF EM  +GI   +   +  +I A A L  L
Sbjct: 195 QKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVL 254

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
            LG ++   +  LG +++  + NALVDMY KC  V  AK++FG    R++V   +I+   
Sbjct: 255 GLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGT 314

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            + GLA EAL++ + ML  G +P+ VT +  + A + +G +  GR               
Sbjct: 315 AQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRY-------------- 360

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
              N+MI                D+  N ++  +  L+  L ++G +E A  +   MP +
Sbjct: 361 -FFNSMIK---------------DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFK 404

Query: 436 -DHISWNTMLGG 446
            D  +W  +L  
Sbjct: 405 PDEATWAALLSA 416



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 16/262 (6%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI-LPDKFTFPFVLNACTKSSAFGEGVQV 160
            L  + +LI G    G  V++  L++E+   GI + D F    ++ A    +  G G Q+
Sbjct: 201 NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI 260

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           H  ++ +G++  +FV N L++ Y +C D++  +++F  M +R++VSWTS+I   A+  L 
Sbjct: 261 HCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLA 320

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNA 279
           +EA+ L+  M+  G+KPN VT V +I AC+ +  +  G     + I + G+  +      
Sbjct: 321 EEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTC 380

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRN--------LVLCNTIMSNYVRLGLAREALAILDEM 331
           L+D+  + G ++ A+ L      +         L  CN   +  + + +A   L++  E 
Sbjct: 381 LLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPE- 439

Query: 332 LLHGPRPDRVTMLSAVSASAQL 353
                 P    +LS + ASA +
Sbjct: 440 -----DPSTYILLSNIYASAAM 456


>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Vitis vinifera]
          Length = 540

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/557 (40%), Positives = 327/557 (58%), Gaps = 31/557 (5%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G V  A  +F      NL + NTI+  Y        A+A+  +M L G  P+  T    +
Sbjct: 15  GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           +A  +L  L  G+  H  +++ GL+    + N +I +Y  CG  + AC +FD        
Sbjct: 75  NACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFD-------- 126

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                                  EMP  D  SW+TM+ G +Q     E ++L R M +E 
Sbjct: 127 -----------------------EMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAEN 163

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           +  D  T+  V   CG LG LDL KW+++YI+K G+  D+ L TALV M+++CG    A+
Sbjct: 164 VSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNAL 223

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           +VF+ M +RDV+ W+  I   A+ G+ E+A++LF+ M R  I P+ + F  VL+A SH G
Sbjct: 224 KVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSG 283

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV +G  +F +M   + ++PQI HYGCMVDL  RAG++G A   I++MP+EPN V+W +L
Sbjct: 284 LVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTL 343

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC+ H    +  + + +I +LDP     +V +SN+YAS G+W++V +VR  MKE+  +
Sbjct: 344 LGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMKEKAPK 403

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K  G SSIE+N  VH+F  G+ESHP+   I  ML +M  +L+  G+V    +VL D+DE+
Sbjct: 404 KQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHVASTVDVLHDIDEE 463

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+Y L  HSE+LA+A+GL+ T    PIR+VKNLR C DCH   KL+S+VY+REII+RD 
Sbjct: 464 EKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRACRDCHEVIKLISEVYNREIILRDR 523

Query: 828 NRFHFFRQGSCSCSDFW 844
             FH FR+  CSC+D+W
Sbjct: 524 VCFHHFRERGCSCNDYW 540



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 171/342 (50%), Gaps = 10/342 (2%)

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
           +   A+ + I        LFM+N++IRGYS     + AI+LY ++   GI P+ +TF FV
Sbjct: 14  HGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFV 73

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           LNAC K     EG ++H  IVK G D +  + N LI  Y  CG +     +FDEM E + 
Sbjct: 74  LNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDS 133

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
            SW++++   ++     E + L  EM  E +  ++ T+  V+  C  L  L+LG  V +Y
Sbjct: 134 ASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSY 193

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           ID+ G+K + ++  ALV MY KCG++D A ++F    +R++   + +++ Y   G   +A
Sbjct: 194 IDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKA 253

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICN 379
           L + D M      P+ VT  S +SA +  G +  G      M   Y +   ++ +     
Sbjct: 254 LQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHY----G 309

Query: 380 TMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNG 420
            M+D++ + G    A +    M     VV W +L+     +G
Sbjct: 310 CMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHG 351



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 173/402 (43%), Gaps = 40/402 (9%)

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G +     +F      N+  W ++I   +  D P  A+ L+ +M   GI PNS T   V+
Sbjct: 15  GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           +AC KL  L  G  + + I + G+     ++N L+ +Y  CG +D A  +F E  + +  
Sbjct: 75  NACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSA 134

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
             +T++S Y + G A E L +L EM       D  T+ S V     LG L  G+  H Y+
Sbjct: 135 SWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYI 194

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
            + G++    +   ++ MY KCG  + A ++F  M+ + V +W+ +IAG   +G  E A 
Sbjct: 195 DKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKAL 254

Query: 427 EVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           ++F  M       + +++ ++L   +   + E+  ++F  M +E     ++   G     
Sbjct: 255 QLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYG----- 309

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
                                         +VD+F R G    A +  + M  + +V  W
Sbjct: 310 -----------------------------CMVDLFCRAGMVGHAHKFIQTMPIEPNVVLW 340

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLTA 582
              +GA    G       +  ++L+     P++ VFV  + A
Sbjct: 341 RTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYA 382



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 6/257 (2%)

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           +G V  A  +FS     +   WNT++ G +  +    A+ L++ M    I  +  T   V
Sbjct: 14  HGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFV 73

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
            +AC  L  L   + +++ I K G+  +  L   L+ ++A CG    A  +F  M + D 
Sbjct: 74  LNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDS 133

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-WHLFR 597
           ++W+  +   +  G   + ++L  EM  + +  D+     V+  C   G+++ G W    
Sbjct: 134 ASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKW--VH 191

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA--ACQKHQ 655
           S  D  GV   +V    +V +  + G L  AL + + M  E +   W  ++A  A   H 
Sbjct: 192 SYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGM-AERDVTTWSIMIAGYAIHGHD 250

Query: 656 NVDIAAYAAERITELDP 672
              +  + A + +++ P
Sbjct: 251 EKALQLFDAMKRSKIIP 267


>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/643 (37%), Positives = 366/643 (56%), Gaps = 41/643 (6%)

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +S TS++C      LP        +  E   K N    + ++  C  ++  +   +V A+
Sbjct: 1   MSGTSVLCQSHLLSLPNSPP----QSSELNAKFNEQGWLSLLKRCKSMEEFK---QVHAH 53

Query: 265 IDELGMKANALMVNALVD--MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           I +LG+  ++   + LV      + G+++ A  +F + ++      NT++   V      
Sbjct: 54  ILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLE 113

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL +  EML  G  PD  T    + A + L  L  G   H +V + GLE    + N +I
Sbjct: 114 EALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLI 173

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY KCG                                +E A  VF +M  +   SW++
Sbjct: 174 SMYGKCGA-------------------------------IEHAGVVFEQMDEKSVASWSS 202

Query: 443 MLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           ++G      M+ E + L   M  E R + +   +V   SAC +LG+ +L + I+  + +N
Sbjct: 203 IIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRN 262

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
               ++ + T+L+DM+ +CG  ++ + VF+ M  ++  ++T  I  +A+ G G +AV +F
Sbjct: 263 ISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVF 322

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           ++ML +G+ PD +V+VGVL+ACSH GLVN+G   F  M   H + P I HYGCMVDL+GR
Sbjct: 323 SDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGR 382

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG+L EA DLIKSMP++PNDV+W SLL+AC+ H N++I   AAE I  L+    G +++L
Sbjct: 383 AGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVL 442

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           +N+YA A KW NVAR+R +M E+ + + PG S +E N  V++F S D+S P    I  M+
Sbjct: 443 ANMYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMI 502

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
           ++M  +L+  GY PD++ VLLDVDE EK+  L HHS+KLA+AF LI TS+  PIR+ +NL
Sbjct: 503 QQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRISRNL 562

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH++ K +S +Y+REI VRD NRFH F+ G+CSC D+W
Sbjct: 563 RMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 605



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 221/456 (48%), Gaps = 51/456 (11%)

Query: 11  VLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV 70
           +L+ P     +++  AK   +   S+  LK CK++ E KQ H HILK GL +     S +
Sbjct: 12  LLSLPNSPPQSSELNAKFNEQGWLSL--LKRCKSMEEFKQVHAHILKLGLFYDSFCGSNL 69

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           V +CA +  + S+ YA   F    +        F YN++IRG        EA+ LYVE+ 
Sbjct: 70  VASCA-LSRWGSMEYACSIFSQIEEPGS-----FEYNTMIRGNVNSMDLEEALLLYVEML 123

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
             GI PD FT+PFVL AC+   A  EGVQ+H  + K G + DVFV+N LI+ YG+CG I 
Sbjct: 124 ERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIE 183

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI-KPNSVTMVCVISAC 249
               VF++M E++V SW+S+I A A  ++  E + L  +M  EG  +     +V  +SAC
Sbjct: 184 HAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSAC 243

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             L +  LG  +   +     + N ++  +L+DMY+KCG+++    +F     +N     
Sbjct: 244 THLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYT 303

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            +++     G  REA+ +  +ML  G  PD V  +  +SA +  G           ++  
Sbjct: 304 VMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAG-----------LVNE 352

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL+ ++ +                    F+HM   T+  +  ++  + + G ++ A ++ 
Sbjct: 353 GLQCFNRM-------------------QFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLI 393

Query: 430 SEMPGR-DHISWNTML-----------GGLTQENMF 453
             MP + + + W ++L           G +  EN+F
Sbjct: 394 KSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIF 429



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 206/455 (45%), Gaps = 73/455 (16%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC-----GDI 189
           L  KF     L+   +  +  E  QVH  I+K+G   D F   C  N    C     G +
Sbjct: 25  LNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLFYDSF---CGSNLVASCALSRWGSM 81

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                +F ++ E     + ++I         +EA+ L+ EM+E GI+P++ T   V+ AC
Sbjct: 82  EYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKAC 141

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           + L  L+ G ++ A++ + G++ +  + N L+ MY KCGA++ A  +F +  ++++   +
Sbjct: 142 SLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWS 201

Query: 310 TIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           +I+  +  + +  E L +L +M   G  R +   ++SA+SA   LG    GR  HG +LR
Sbjct: 202 SIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLR 261

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           N  E    +  ++IDMY+KCG  E    +F +M++K   S+  +IAGL  +G        
Sbjct: 262 NISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGR------- 314

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
                GR                   EA+ +F  ML E +  D V  VGV SAC + G +
Sbjct: 315 -----GR-------------------EAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLV 350

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
           +            G+ C           F R       MQ F  M K  +  +   +  M
Sbjct: 351 N-----------EGLQC-----------FNR-------MQ-FEHMIKPTIQHYGCMVDLM 380

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
              G  ++A +L   M    IKP+ +V+  +L+AC
Sbjct: 381 GRAGMLKEAYDLIKSM---PIKPNDVVWRSLLSAC 412


>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/601 (37%), Positives = 350/601 (58%), Gaps = 35/601 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++ +  +L+NL+   +V A+I   G+  +  ++  L+ +    G++  A++LF    + +
Sbjct: 97  LLRSGPRLRNLQ---QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPD 153

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
             L ++++    + G + + +     ML  G      T  S + A A L  L  G+  H 
Sbjct: 154 SFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHS 213

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           +V+         +C    DMY++                       +LIA   K  D++ 
Sbjct: 214 HVM---------VCGYGSDMYVQA----------------------ALIALYAKASDMKV 242

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A++VF  MP R  I+WN+++ G  Q  + +E++ LF +M+    + D  T+V + S+C  
Sbjct: 243 AKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQ 302

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           LGALD   W++ Y + NG   ++ L T+L++M+ RCG+  +A +VF  M++R+V  WTA 
Sbjct: 303 LGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAM 362

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I    M G G QA+ELF EM   G +P++I FV VL+AC+H GL++ G  +F SM + +G
Sbjct: 363 ISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYG 422

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKS-MPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
           + P + H  CMVD+ GRAGLL +A   IK  +P EP   +W S+L AC+ H+N D+    
Sbjct: 423 LVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKV 482

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
           AE +  ++PE  G +V+LSNIYA AG+   V  VR  M  + ++K  G S+IE+N K + 
Sbjct: 483 AEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYL 542

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F+ GD+SHP+ N I   L E+ CR  ++GYVP   +++ D++E+E+ Y L +HSEKLA+A
Sbjct: 543 FSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALA 602

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           FGL+ T++   IR+VKNLR+C DCHS  K +S + DREIIVRD  RFH F+ GSCSC D+
Sbjct: 603 FGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDY 662

Query: 844 W 844
           W
Sbjct: 663 W 663



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 224/440 (50%), Gaps = 25/440 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L++   L  L+Q H HI+  GL    S ++K++      G   S+TYA++ F      + 
Sbjct: 98  LRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAG---SITYARRLFPTVPNPDS 154

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
                F+++SL++  S  G  ++ +  Y  +   G     +TF  V+ AC   SA   G 
Sbjct: 155 -----FLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGK 209

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++H  ++  G+  D++V+  LI  Y +  D+   ++VFD M +R +++W SLI    +  
Sbjct: 210 EIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNG 269

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           LP+E++ LF  M+E G +P+S T+V ++S+C++L  L+ G  +  Y D  G   N ++  
Sbjct: 270 LPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGT 329

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L++MY +CG V  A+++F   K+RN+V    ++S Y   G  R+A+ +  EM  +GPRP
Sbjct: 330 SLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRP 389

Query: 339 DRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           + +T ++ +SA A  G +  GR     M   Y L  G+E   ++C  M+DM+ + G    
Sbjct: 390 NNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVE--HNVC--MVDMFGRAGLLND 445

Query: 394 ACRIFDHMSNKT--VVSWNSLIAG--LIKNGD--VESAREVFSEMPGRDHISWNTMLGGL 447
           A +       K      W S++    + +N D  V+ A  V S  P  ++     ML  +
Sbjct: 446 AYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEP--ENPGHYVMLSNI 503

Query: 448 TQENMFEEAMELFRVMLSER 467
                  + +E+ R M++ R
Sbjct: 504 YALAGRMDRVEMVRNMMTRR 523


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/698 (35%), Positives = 383/698 (54%), Gaps = 34/698 (4%)

Query: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE 232
           V   N  I +    G+I   R  FD M  R   S+ +LI    R  LP  A+ LF  M  
Sbjct: 17  VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76

Query: 233 EGIKPNSVTMV-------CVISACAKLQNLELGDRVCAYIDEL------GMKANALMV-- 277
             +   +  +         +  A A L ++ L   V ++   L      G+ A+A+ +  
Sbjct: 77  RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136

Query: 278 ----------NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
                       L+  ++  G V+ A++LF E  D+++V    ++S Y + G   EA A+
Sbjct: 137 QMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARAL 196

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
            DEM    P+ + V+  + +S  AQ G ++  R     +       W      M+  Y++
Sbjct: 197 FDEM----PKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSW----TAMLVGYIQ 248

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
            G  E A  +F+ M +  V + N+++ G  ++G V++A+ +F  M  RD  +W+ M+   
Sbjct: 249 AGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVY 308

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
            Q     EA+  FR ML   I+ +  + + + + C  L   D  + ++A + +     D+
Sbjct: 309 EQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDV 368

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
              +AL+ M+ +CG+  +A +VF   E +DV  W + I   A  G GE+A+ +F+++   
Sbjct: 369 FAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLA 428

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
            + PD I ++GVLTACS+ G V +G  +F SM     +     HY CMVDLLGRAGL+ E
Sbjct: 429 RMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDE 488

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           ALDLI +MPVEP+ +IWG+L+ AC+ H+N +IA  AA+++ EL+P  +G +VLLS+IY S
Sbjct: 489 ALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTS 548

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE-SHPEMNNISSMLREMNC 746
            G+W + + +R  +  + + K PG S IE N  VH FTSGD  SHPE   I +ML E++ 
Sbjct: 549 TGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDG 608

Query: 747 RLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCD 806
            L ++GY  D + VL DVDE++K   L +HSE+ A+A+GL+     MPIRV+KNLR+C D
Sbjct: 609 LLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGD 668

Query: 807 CHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           CHS  KL++K+  REII+RD NRFH F+ G CSC D+W
Sbjct: 669 CHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 203/459 (44%), Gaps = 59/459 (12%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHGA 163
           + SL+RGY   GL  +AI L+ ++      P++   T+  +L     +    E  ++   
Sbjct: 115 FTSLLRGYVRHGLLADAIRLFHQM------PERNHVTYTVLLGGFLDAGRVNEARKLFDE 168

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +     D+DV     +++ Y + G I + R +FDEM +RNVVSWT++I   A+      A
Sbjct: 169 MP----DKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILA 224

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
             LF  M +      +  +V  I A   +++ E  D   A  D      NA+MV      
Sbjct: 225 RKLFEVMPDRNEVSWTAMLVGYIQA-GHVEDAE--DLFNAMPDHPVAACNAMMVG----- 276

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           + + G VD AK +F     R+    + ++  Y +     EAL+   EML  G RP+  + 
Sbjct: 277 FGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSF 336

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S ++  A L     GR  H  +LR   +      + +I MY+KCG  + A R+F+    
Sbjct: 337 ISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEP 396

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K VV WNS+I G  ++G                       LG        EEA+ +F  +
Sbjct: 397 KDVVMWNSMITGYAQHG-----------------------LG--------EEALGIFDDL 425

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA----LVDMFAR 519
              R+  D +T +GV +AC Y G +   + I+      G++  ++L  A    +VD+  R
Sbjct: 426 RLARMAPDGITYIGVLTACSYTGKVKEGREIF---NSMGMNSSIRLGAAHYSCMVDLLGR 482

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
            G    A+ +   M  + D   W A +GA  M  N E A
Sbjct: 483 AGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIA 521



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 176/364 (48%), Gaps = 31/364 (8%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FT 140
           +T A+  FD   K N  S     + ++I GY+  G  + A  L      F ++PD+   +
Sbjct: 190 ITEARALFDEMPKRNVVS-----WTAMISGYAQNGKVILARKL------FEVMPDRNEVS 238

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L    ++    +   +  A+     D  V   N ++  +G+ G +   + +F+ M 
Sbjct: 239 WTAMLVGYIQAGHVEDAEDLFNAMP----DHPVAACNAMMVGFGQHGMVDAAKAMFERMC 294

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            R+  +W+++I    + +   EA+  F EM+  GI+PN  + + +++ CA L   + G  
Sbjct: 295 ARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRE 354

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           + A +       +   V+AL+ MY+KCG +D AK++F   + +++V+ N++++ Y + GL
Sbjct: 355 LHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGL 414

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWD 375
             EAL I D++ L    PD +T +  ++A +  G +  GR     M     +R G   + 
Sbjct: 415 GEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHY- 473

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG--LIKNGDVE--SAREVFS 430
              + M+D+  + G  + A  + ++M      + W +L+    + KN ++   +A+++  
Sbjct: 474 ---SCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLE 530

Query: 431 EMPG 434
             PG
Sbjct: 531 LEPG 534


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 265/857 (30%), Positives = 430/857 (50%), Gaps = 93/857 (10%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           N  +L + K+ H  I K G   +    S+++      G  ++   A K FD     +  S
Sbjct: 22  NSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDN---AIKLFD-----DIPS 73

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA-FGEGVQ 159
           + +  +N +I G     L  + + L+  +    + PD+ TF  VL AC+   A F    Q
Sbjct: 74  SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQ 133

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  I+  GF     V N LI+ Y + G +   + VF+ +  ++ VSW ++I   ++   
Sbjct: 134 IHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGR 193

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             EA+ LF +M +  + P       V+SAC K++  +LG+++  +I + G+ +   + NA
Sbjct: 194 EDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNA 253

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           LV +Y + G +  A+Q+F +   R+ +  N+++S   + G +  AL + ++M L   +PD
Sbjct: 254 LVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPD 313

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            VT+ S +SA A +G    G+  H YV++ G+     I  +++D+Y+KC           
Sbjct: 314 CVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF---------- 363

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                D+E+A E F      + + WN ML    Q     E+  +
Sbjct: 364 ---------------------DIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWI 402

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M  E +  ++ T   +   C  LGALDL + I+  + K+G   ++ + + L+DM+A+
Sbjct: 403 FLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK 462

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
            G+   A  + +R+ + DV +WTA I          +A++LF EM  QGI+ D+I F   
Sbjct: 463 HGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSA 522

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVS--------------------------------- 606
           ++AC+    +NQG  +  + + I G S                                 
Sbjct: 523 ISACAGIQALNQGQQI-HAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFE 581

Query: 607 -PQ--IVHYGCMVDLLGRAGLLGEALDLIKSM----------------PVEPNDVIWGSL 647
            P+  +V +  M+    + G   EA+ L + M                P+EP+ +IW +L
Sbjct: 582 MPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRTL 641

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L+AC  H+N++I  +AA  + EL+PE S  +VLLSN+YA +GKW    R R  MK++G++
Sbjct: 642 LSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVK 701

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K PG S IEV   +H F  GD  HP    I   + ++N R  + GYV D  N+L DV+++
Sbjct: 702 KEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQE 761

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           +K      HSEKLA+AFGL+S + TMPIRV+KNLR+C DCH++ K VSK+ +R I+VRD 
Sbjct: 762 QKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDA 821

Query: 828 NRFHFFRQGSCSCSDFW 844
            RFH F  G CSC D+W
Sbjct: 822 YRFHHFEGGVCSCKDYW 838



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 256/544 (47%), Gaps = 41/544 (7%)

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           GI  +  T+ ++   C  S +  +  ++H  I K GFD +  + + LI+ Y   G++ + 
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            ++FD++   NV  W  +I     + L  + + LF  M+ E + P+  T   V+ AC+  
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124

Query: 253 QN-LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +   ++ +++ A I   G  ++ L+ N L+D+Y K G VD AK +F     ++ V    +
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +S   + G   EA+ +  +M      P      S +SA  ++     G   HG++++ GL
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
                +CN ++ +Y + G    A +IF  M  +  +S+NSLI+GL + G        FS 
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRG--------FS- 295

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                                 + A++LF  M  + +K D VT+  + SAC  +GA    
Sbjct: 296 ----------------------DRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKG 333

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K +++Y+ K G+  D+ +  +L+D++ +C D + A + F   E  +V  W   + A    
Sbjct: 334 KQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQL 393

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           GN  ++  +F +M  +G+ P+   +  +L  C+  G ++ G  +    T +     Q   
Sbjct: 394 GNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH---TQVIKSGFQFNV 450

Query: 612 YGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
           Y C  ++D+  + G L  A  +++ +  E + V W +++A   +H   D+ A A +   E
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH---DLFAEALKLFQE 506

Query: 670 LDPE 673
           ++ +
Sbjct: 507 MENQ 510



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 191/422 (45%), Gaps = 34/422 (8%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M E GI+ N  T + +   C    +L    ++ A I + G     ++ + L+D+Y+  G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           VD A +LF +    N+   N ++S  +   LA + L +   M+     PD  T  S + A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 350 -SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
            S            H  ++ +G      +CN +ID+Y K G  ++A  +F+ +  K  VS
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           W ++I+GL +NG     RE                          +EA+ LF  M    +
Sbjct: 181 WVAMISGLSQNG-----RE--------------------------DEAILLFCQMHKSAV 209

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
                    V SAC  +    L + ++ +I K G+  +  +  ALV +++R G+   A Q
Sbjct: 210 IPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F +M +RD  ++ + I  +A  G  ++A++LF +M    +KPD +    +L+AC+  G 
Sbjct: 270 IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGA 329

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
             +G  L   +  + G+S  ++  G ++DL  +   +  A +   +   E N V+W  +L
Sbjct: 330 GYKGKQLHSYVIKM-GMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETE-NVVLWNVML 387

Query: 649 AA 650
            A
Sbjct: 388 VA 389


>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
          Length = 648

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/552 (42%), Positives = 329/552 (59%), Gaps = 33/552 (5%)

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQ 352
           + LF +  D      N+++      G A  ALA+   ML  G PRP+  T+  A+ A A 
Sbjct: 129 RNLFDQIPDPTAFCYNSLIRALPAAGSA-PALAVYRRMLRAGSPRPNSFTLAFALKACAA 187

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           +     GR  H   LR GL     +   ++++Y KC +  +A  +FD M+          
Sbjct: 188 VPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMA---------- 237

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
                  GD             ++ ++W+ M+ G ++  M  EA+ LFR M +  ++ D 
Sbjct: 238 -------GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDE 277

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           VTMV V SAC   GALDL KW++AYI++ GI  D++L+TAL+DM+A+CG  +RA  VF  
Sbjct: 278 VTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDA 337

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M ++D  AW+A I   A+ G  E A+ LF+ ML   ++P+++ F+GVL+AC+H GLV  G
Sbjct: 338 MVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDG 397

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              +  M ++ G+ P + +YGCMVDLL R+GLL +A   +  MPV PN VIW +LL AC+
Sbjct: 398 RRYWSIMQNL-GIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACK 456

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
               +DIA  A +R+ EL+P     +VLLSN+YAS  +W  V+ +R +MK + +  + G 
Sbjct: 457 SSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGR 516

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           SSIE+NG +HEF   D+SHPE+  I  +LREM  R+R AG+ P    VL DV E+EK+  
Sbjct: 517 SSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAA 576

Query: 773 LSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHF 832
           L  HSE+LA+A+GL+ T     IRVVKNLR C DCH  AK++SK Y+REI+VRD  RFH 
Sbjct: 577 LCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHK 636

Query: 833 FRQGSCSCSDFW 844
           F  GSCSC DFW
Sbjct: 637 FMGGSCSCKDFW 648



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 192/383 (50%), Gaps = 9/383 (2%)

Query: 14  TPTVTTLTNQHKAKTTPKDSPS---IGSLKNCKTLNELKQPHCHILKQGLGHKPSY--IS 68
           TP +  L  + +A T P+++     +  ++ C  L  L+  H H+ +  L    +   +S
Sbjct: 47  TPRMQLLKPK-EAATLPREALEAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALS 105

Query: 69  KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVE 128
           K++ +C       +   A  ++   + D     T F YNSLIR     G    A+++Y  
Sbjct: 106 KLLASCVSAPAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAG-SAPALAVYRR 164

Query: 129 LAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           +   G   P+ FT  F L AC    A GEG Q+H   ++ G     +V+  L+N Y +C 
Sbjct: 165 MLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCE 224

Query: 188 DIVDGRRVFDEMS-ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
            +   R VFD M+ ++N+V+W++++   +R  +  EA+ LF EM   G++P+ VTMV VI
Sbjct: 225 QVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVI 284

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           SACAK   L+LG  V AYID  G+  +  +  AL+DMY KCG ++ A+ +F    +++  
Sbjct: 285 SACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTK 344

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
             + ++  +   GL  +AL +   ML    RP+ VT +  +SA A  G +  GR     +
Sbjct: 345 AWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIM 404

Query: 367 LRNGLEGWDSICNTMIDMYMKCG 389
              G++        M+D+  + G
Sbjct: 405 QNLGIKPSMENYGCMVDLLCRSG 427



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 162/335 (48%), Gaps = 42/335 (12%)

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPK----EAVYLFFEMVEEG-IKPNSVTMVCVIS 247
           R +FD++ +     + SLI     R LP      A+ ++  M+  G  +PNS T+   + 
Sbjct: 129 RNLFDQIPDPTAFCYNSLI-----RALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALK 183

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF-GECKDRNLV 306
           ACA +     G ++ A     G+  +A +   L+++Y KC  V  A+ +F G   D+NLV
Sbjct: 184 ACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLV 243

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
             + ++S Y R+G+  EAL +  EM   G  PD VTM+S +SA A+ G L  G+  H Y+
Sbjct: 244 AWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYI 303

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
            R G+     +   +IDMY KCG  E A  +FD M  K   +W+++I G   +G      
Sbjct: 304 DRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHG------ 357

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
                                    + E+A+ LF  ML  +++ + VT +GV SAC + G
Sbjct: 358 -------------------------LVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSG 392

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            ++  +  ++ ++  GI   M+    +VD+  R G
Sbjct: 393 LVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSG 427



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 172/350 (49%), Gaps = 17/350 (4%)

Query: 9   PLVLATPTVTTLTNQHKAKTTPKDSPSIG-SLKNCKTL---NELKQPHCHILKQGLGHKP 64
           P   + P +       +A +   +S ++  +LK C  +    E +Q H   L+QGL    
Sbjct: 151 PAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSA 210

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
              + ++   A+    E +  A+  FD    D      L  +++++ GYS +G+  EA+ 
Sbjct: 211 YVQTGLLNLYAKC---EQVALARTVFDGMAGDK----NLVAWSAMVSGYSRVGMVNEALG 263

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L+ E+   G+ PD+ T   V++AC K+ A   G  VH  I + G   D+ +   LI+ Y 
Sbjct: 264 LFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYA 323

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG I   R VFD M E++  +W+++I   A   L ++A+ LF  M+E  ++PN+VT + 
Sbjct: 324 KCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIG 383

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ-LFGECKDR 303
           V+SACA    +E G R  + +  LG+K +      +VD+  + G +D A   + G     
Sbjct: 384 VLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSP 443

Query: 304 NLVLCNTIM---SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           N V+  T++    +  R+ +A  A   L E+  H   P+   +LS + AS
Sbjct: 444 NSVIWRTLLVACKSSNRIDIAESATKRLLELEPHN--PENYVLLSNLYAS 491


>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/601 (37%), Positives = 350/601 (58%), Gaps = 35/601 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++ +  +L+NL+   +V A+I   G+  +  ++  L+ +    G++  A++LF    + +
Sbjct: 33  LLRSGPRLRNLQ---QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPD 89

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
             L ++++    + G + + +     ML  G      T  S + A A L  L  G+  H 
Sbjct: 90  SFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHS 149

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           +V+         +C    DMY++                       +LIA   K  D++ 
Sbjct: 150 HVM---------VCGYGSDMYVQA----------------------ALIALYAKASDMKV 178

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A++VF  MP R  I+WN+++ G  Q  + +E++ LF +M+    + D  T+V + S+C  
Sbjct: 179 AKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQ 238

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           LGALD   W++ Y + NG   ++ L T+L++M+ RCG+  +A +VF  M++R+V  WTA 
Sbjct: 239 LGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAM 298

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I    M G G QA+ELF EM   G +P++I FV VL+AC+H GL++ G  +F SM + +G
Sbjct: 299 ISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYG 358

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKS-MPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
           + P + H  CMVD+ GRAGLL +A   IK  +P EP   +W S+L AC+ H+N D+    
Sbjct: 359 LVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKV 418

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
           AE +  ++PE  G +V+LSNIYA AG+   V  VR  M  + ++K  G S+IE+N K + 
Sbjct: 419 AEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYL 478

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F+ GD+SHP+ N I   L E+ CR  ++GYVP   +++ D++E+E+ Y L +HSEKLA+A
Sbjct: 479 FSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALA 538

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           FGL+ T++   IR+VKNLR+C DCHS  K +S + DREIIVRD  RFH F+ GSCSC D+
Sbjct: 539 FGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDY 598

Query: 844 W 844
           W
Sbjct: 599 W 599



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 224/440 (50%), Gaps = 25/440 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L++   L  L+Q H HI+  GL    S ++K++      G   S+TYA++ F      + 
Sbjct: 34  LRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAG---SITYARRLFPTVPNPDS 90

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
                F+++SL++  S  G  ++ +  Y  +   G     +TF  V+ AC   SA   G 
Sbjct: 91  -----FLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGK 145

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++H  ++  G+  D++V+  LI  Y +  D+   ++VFD M +R +++W SLI    +  
Sbjct: 146 EIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNG 205

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           LP+E++ LF  M+E G +P+S T+V ++S+C++L  L+ G  +  Y D  G   N ++  
Sbjct: 206 LPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGT 265

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +L++MY +CG V  A+++F   K+RN+V    ++S Y   G  R+A+ +  EM  +GPRP
Sbjct: 266 SLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRP 325

Query: 339 DRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
           + +T ++ +SA A  G +  GR     M   Y L  G+E   ++C  M+DM+ + G    
Sbjct: 326 NNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVE--HNVC--MVDMFGRAGLLND 381

Query: 394 ACRIFDHMSNKT--VVSWNSLIAG--LIKNGD--VESAREVFSEMPGRDHISWNTMLGGL 447
           A +       K      W S++    + +N D  V+ A  V S  P  ++     ML  +
Sbjct: 382 AYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEP--ENPGHYVMLSNI 439

Query: 448 TQENMFEEAMELFRVMLSER 467
                  + +E+ R M++ R
Sbjct: 440 YALAGRMDRVEMVRNMMTRR 459


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/610 (39%), Positives = 340/610 (55%), Gaps = 45/610 (7%)

Query: 280 LVDMYMKCGAVDTAKQLF----GECKDRNLVLC-NTIMSNYVRLGLAREALAILDEMLLH 334
           L+  Y  C A+  A  +      + + R   +C N ++       L R+AL +   M   
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 335 GPR--PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           GP   PD  T   A+ + +   DLL G   H  V +  L+    + ++ I MY +CG+ E
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNG-------------------------------- 420
            A R+FD M ++ VVSWN++IAG  + G                                
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAM 235

Query: 421 ------DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                 D+   R VF  M  ++ ISWN ML          +A+ELF +M  + ++ D +T
Sbjct: 236 GNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSIT 295

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +  V   CG L A  + K I+  I++  +  ++ L  AL+DM+A CG  + A ++F  M 
Sbjct: 296 LATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMS 355

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
            RDV +WT+ I A    G+G +AV+LF +ML QG++PDSI FV VL ACSH GL+  G H
Sbjct: 356 ARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKH 415

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F SMT  + + P+  HY CMVDLLGRAG + EA D I +M +EPN+ +WG+LL AC+ H
Sbjct: 416 YFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIH 475

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
            N+DI   AA+ +  L PE++G +VLLSN+YA AG+W +V  VR  M  +GI+K PG+S 
Sbjct: 476 SNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSI 535

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           +E+  +VH F  GD  HP+   I   L E+  ++R  GY P++   L DV+E++K+  LS
Sbjct: 536 VELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLS 595

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
            HSEKLA+AF L++TS    IRV  NLR C DCH  AKL+S +  REI+++D NR H   
Sbjct: 596 VHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIV 655

Query: 835 QGSCSCSDFW 844
           QG CSC D+W
Sbjct: 656 QGVCSCGDYW 665



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 199/481 (41%), Gaps = 68/481 (14%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L  L+  H  +L       PS     V          +L  A    +    D  +  T  
Sbjct: 28  LPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLESSSPDGRSRTTTV 87

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELA--GFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            +N LIR  +   L  +A+ L+  +   G    PD +T+P  L +C+ S     G+Q+H 
Sbjct: 88  CFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHS 147

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
           A+ K+  DR+V+V +  I+ Y  CG   D  RVFD M  R+VVSW ++I   AR  L   
Sbjct: 148 AVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDR 207

Query: 223 AVYLFFE-MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           A+ +F + +V +G  P++ TM  ++ A                           M NA  
Sbjct: 208 AIEVFKQFVVLQGSMPDAGTMAGILPA---------------------------MGNA-- 238

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
               K   +   +++F   + + L+  N +++ Y       +A+ +   M      PD +
Sbjct: 239 ----KPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSI 294

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+ + +    +L     G+  H  + R  +     + N ++DMY  CG  + A  IFD M
Sbjct: 295 TLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLM 354

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
           S + V+SW S+I+   K+G             GR                   EA++LF 
Sbjct: 355 SARDVISWTSIISAYGKHGH------------GR-------------------EAVDLFE 383

Query: 462 VMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
            ML + ++ D +  V V +AC + G L D   +  +   +  I    +  T +VD+  R 
Sbjct: 384 KMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRA 443

Query: 521 G 521
           G
Sbjct: 444 G 444



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 7/208 (3%)

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F   + DN     L  +N+++  Y+     V+A+ L++ +    + PD  T   VL  C 
Sbjct: 245 FVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCG 304

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
           + SAF  G ++H  I +     ++ +EN L++ Y  CG + D R +FD MS R+V+SWTS
Sbjct: 305 ELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTS 364

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I A  +    +EAV LF +M+ +G++P+S+  V V++AC+    L  G     Y D + 
Sbjct: 365 IISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKH---YFDSMT 421

Query: 270 MK----ANALMVNALVDMYMKCGAVDTA 293
            +      A     +VD+  + G ++ A
Sbjct: 422 SRYHIIPKAEHYTCMVDLLGRAGCINEA 449


>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 684

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/616 (38%), Positives = 365/616 (59%), Gaps = 11/616 (1%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           PN  T   +++   KL  L+   ++ A +    + +NA +  +L+  Y+       A+ L
Sbjct: 72  PNPQTFSLLLNQRPKLSPLQ---QIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARIL 128

Query: 297 FGECKDRN--LVLCNTIMSNYVRLGLAREALAILDEML-LHGPR---PDRVTMLSAVSAS 350
           F      +  + L N ++  Y ++  ++E + +   ML L GP    PD  T    +++ 
Sbjct: 129 FDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSC 188

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           +    L+ G + HG V+++G E    + N++I+M     + E A ++F+ MS + V SW 
Sbjct: 189 SHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWT 248

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML-SERIK 469
           SL+ G  K+G+++ A E+F+ MP R+ +SW  M+ G      + EA+  F  ML  +R+ 
Sbjct: 249 SLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVN 308

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +   +V V SAC +LGALD   WI+ YI+K GI     ++TAL+DM+A+CG    A +V
Sbjct: 309 PNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRV 368

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  + KRDV ++T+ I  ++  G G+ A+ +F +ML + + P+ I  +GVL  CSH GLV
Sbjct: 369 FNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLV 428

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +G  +  +M  + G++P+I HYGC +DLLGRAG L  AL+++K+MP+EP+ VIW +LL+
Sbjct: 429 EEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLS 488

Query: 650 ACQKHQNVDIAAYAAERITEL-DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           A + H NV++       I +L   + +G  VLLSN+YAS G+W  V  +R  M ++    
Sbjct: 489 ASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSES 548

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG S IEVNG VHEF   D+ HP++  I + L E+  RL   GY  +   V  D++E+E
Sbjct: 549 SPGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEE 608

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K+  ++ HSEKLA+AFGL+ST     IR+VKNLR C DCHS  K +S+VY REI+VRD +
Sbjct: 609 KEQAVAWHSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRS 668

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F +G CSC DFW
Sbjct: 669 RFHTFIEGDCSCKDFW 684



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 273/613 (44%), Gaps = 100/613 (16%)

Query: 1   MALTLNPSPLVLATP-TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQG 59
           +++  NP P+ L  P T + L NQ      PK SP             L+Q H  ++ Q 
Sbjct: 60  ISIPTNPIPIDLPNPQTFSLLLNQR-----PKLSP-------------LQQIHAQVVTQA 101

Query: 60  LGHKPSYISKVV--CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIG 117
           L    S  + ++    CA+     +   A+  FD+Y      S  + ++N +IR YS I 
Sbjct: 102 LSSNASLTASLIHCYLCAK-----NHPNARILFDHY---PSPSPPIKLWNVMIRTYSKIR 153

Query: 118 LGVEAISLYVEL----AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDV 173
              E I L++ +        ++PD++TF FV+ +C+   +   G  VHG +VK GF+ ++
Sbjct: 154 NSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNL 213

Query: 174 FVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA-----------------R 216
           +V N +IN       + D R+VF++MSER+V SWTSL+   A                 R
Sbjct: 214 YVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVR 273

Query: 217 RDLP--------------KEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            D+                EA+  F  M+ ++ + PN   +VCV+SACA L  L+ G+ +
Sbjct: 274 NDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWI 333

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
             YID++G++ ++ +  AL+DMY KCG +D A ++F     R+++   +++S     GL 
Sbjct: 334 HLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLG 393

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT- 380
           ++AL +  +ML     P+ +T+L  ++  +  G +  G      +L N    W       
Sbjct: 394 KDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEG----SSILANMESLWGIAPKIE 449

Query: 381 ----MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFS---EM 432
                ID+  + G  E A  +   M     +V W +L++    + +V    ++ S   ++
Sbjct: 450 HYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIISHIGQL 509

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
              DH     +L      N++       RV    ++ VDR +    +  C          
Sbjct: 510 KSSDHNGGEVLLS-----NLYASLGRWERVTEMRKLMVDRRS--ESSPGC---------- 552

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
              ++IE NG+  + ++A  L        +  +  ++ +R+ +   SA T  +     E 
Sbjct: 553 ---SWIEVNGLVHEFRVADQLHPQIVEIRN--KLNEILKRLSQIGYSANTMQVSFDLNEE 607

Query: 553 NGEQAVELFNEML 565
             EQAV   +E L
Sbjct: 608 EKEQAVAWHSEKL 620


>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/643 (36%), Positives = 370/643 (57%), Gaps = 42/643 (6%)

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +SWTS++C      LP            +  + N+   V  +S   + +++E   +V A+
Sbjct: 1   MSWTSVLCQSHFLSLPNNP--------PQSSELNAKFNVQGLSLLKRCKSMEEFKQVHAH 52

Query: 265 IDELGMKANALMVNALVDM--YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           I +LG+  ++   + LV      + G+++ A  +F + ++      NT++   V      
Sbjct: 53  ILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLE 112

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL +  EML  G  PD  T    + A + LG L  G   H +V + GLEG   + N +I
Sbjct: 113 EALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLI 172

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           +MY KCG                                +E A  VF +M  +   SW++
Sbjct: 173 NMYGKCGA-------------------------------IEHASVVFEQMDEKSVASWSS 201

Query: 443 MLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           ++G      M+ E + L   M  E R + +   +V   SAC +LG+ +  + I+  + +N
Sbjct: 202 IIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRN 261

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
               ++ + T+L+DM+ + G  ++ + VF+ M +++  ++T  I  +A+ G G +A+ +F
Sbjct: 262 ISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVF 321

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           ++ML +G+ PD +V+VGVL+ACSH GLVN+G   F  +   H + P I HYGCMVDL+GR
Sbjct: 322 SDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGR 381

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG+L  A DLIKSMP++PNDV+W SLL+AC+ H N++I   AAE I +L+    G +++L
Sbjct: 382 AGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVL 441

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           +N+YA A KW +VAR+R +M E+ + + PG S +E N  V++F S D+S P+   I  M+
Sbjct: 442 ANMYARAKKWADVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMI 501

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
           ++M  +L+  GY PD++ VLLDVDE EK+  L HHS+KLA+AF LI TS+   IR+ +N+
Sbjct: 502 QQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNI 561

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH++ K +S +Y+REI VRD NRFH F+ G+CSC D+W
Sbjct: 562 RMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 604



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 209/429 (48%), Gaps = 49/429 (11%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           LK CK++ E KQ H HILK GL +     S +V TCA +  + S+ YA   F    +  E
Sbjct: 37  LKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCA-LSRWGSMEYACSIF----RQIE 91

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
              + F YN++IRG        EA+ LYVE+   GI PD FT+PFVL AC+   A  EGV
Sbjct: 92  EPGS-FEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGV 150

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+H  + K G + DVFV+N LIN YG+CG I     VF++M E++V SW+S+I A A  +
Sbjct: 151 QIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVE 210

Query: 219 LPKEAVYLFFEMVEEGI-KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           +  E + L  +M  EG  +     +V  +SAC  L +   G  +   +     + N  + 
Sbjct: 211 MWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVK 270

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
            +L+DMY+K G+++    +F     +N      I++     G  REAL++  +ML  G  
Sbjct: 271 TSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLA 330

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD V  +  +SA +  G           ++  GL+ ++ +                    
Sbjct: 331 PDDVVYVGVLSACSHAG-----------LVNEGLQCFNRL-------------------Q 360

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTML-----------G 445
           F+H    T+  +  ++  + + G ++ A ++   MP + + + W ++L           G
Sbjct: 361 FEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIG 420

Query: 446 GLTQENMFE 454
            +  EN+F+
Sbjct: 421 EIAAENIFK 429



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 200/426 (46%), Gaps = 45/426 (10%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC-----GDIVDGRRVFDEM 199
           L+   +  +  E  QVH  I+K+G   D F   C  N    C     G +     +F ++
Sbjct: 34  LSLLKRCKSMEEFKQVHAHILKLGLFYDSF---CGSNLVATCALSRWGSMEYACSIFRQI 90

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
            E     + ++I         +EA+ L+ EM+E GI+P++ T   V+ AC+ L  L+ G 
Sbjct: 91  EEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGV 150

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ A++ + G++ +  + N L++MY KCGA++ A  +F +  ++++   ++I+  +  + 
Sbjct: 151 QIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVE 210

Query: 320 LAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           +  E L +L +M   G  R +   ++SA+SA   LG    GR  HG +LRN  E   ++ 
Sbjct: 211 MWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVK 270

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
            ++IDMY+K G  E    +F +M+ K   S+  +I GL  +G             GR   
Sbjct: 271 TSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGR------------GR--- 315

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                           EA+ +F  ML E +  D V  VGV SAC + G ++     +  +
Sbjct: 316 ----------------EALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRL 359

Query: 499 E-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN--- 553
           + ++ I   +Q    +VD+  R G  + A  + + M  K +   W + + A  +  N   
Sbjct: 360 QFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEI 419

Query: 554 GEQAVE 559
           GE A E
Sbjct: 420 GEIAAE 425


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/631 (37%), Positives = 361/631 (57%), Gaps = 37/631 (5%)

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           C +RDLP+ A+     +   G+  +S T   +I  C   + +  G+ +C ++   G +  
Sbjct: 37  CYQRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +VN L++MY+K   ++ A QLF +   RN++   T++S Y +  + ++AL +L  ML 
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
              RP+  T  S + +   + D+   RM H  +++ GLE    + + +ID++ K G+ E 
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE- 211

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                                          A  VF EM   D I WN+++GG  Q +  
Sbjct: 212 ------------------------------DALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           + A+ELF+ M       ++ T+  V  AC  L  L+L    + +I K     D+ L  AL
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNAL 299

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VDM+ +CG  + A++VF +M++RDV  W+  I  +A  G  ++A++LF  M   G KP+ 
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I  VGVL ACSH GL+  GW+ FRSM  ++G+ P   HYGCM+DLLG+AG L +A+ L+ 
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
            M  EP+ V W +LL AC+  +N+ +A YAA+++  LDPE +G + LLSNIYA++ KW +
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           V  +R +M+++GI+K PG S IEVN ++H F  GD SHP++  +S  L ++  RL   GY
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VP+   VL D++ ++ +  L HHSEKLA+AFGL++      IR+ KNLR+C DCH F KL
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            SK+  R I++R   R+H F+ G CSC D+W
Sbjct: 600 ASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 208/430 (48%), Gaps = 44/430 (10%)

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           L   G+  D  T+  ++  C  + A  EG  +   +   G    +F+ N LIN Y +   
Sbjct: 52  LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + D  ++FD+M +RNV+SWT++I A ++  + ++A+ L   M+ + ++PN  T   V+ +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C  + ++ +    C  I E G++++  + +AL+D++ K G  + A  +F E    + ++ 
Sbjct: 172 CNGMSDVRMLH--CGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N+I+  + +   +  AL +   M   G   ++ T+ S + A   L  L  G   H ++++
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288

Query: 369 NGLEGWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
                +D    + N ++DMY KCG  E A R+F+ M  + V++W+++I+GL +NG     
Sbjct: 289 -----YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG----- 338

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                       +EA++LF  M S   K + +T+VGV  AC + 
Sbjct: 339 --------------------------YSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372

Query: 486 GALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTA 543
           G L+   + +  ++K  GI    +    ++D+  + G    A+++   ME + D   W  
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432

Query: 544 AIGAMAMEGN 553
            +GA  ++ N
Sbjct: 433 LLGACRVQRN 442



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 171/342 (50%), Gaps = 20/342 (5%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  L  A + FD   + N  S T     ++I  YS   +  +A+ L V +    + P+ +
Sbjct: 109 FNLLNDAHQLFDQMPQRNVISWT-----TMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  VL +C   +   +   +H  I+K G + DVFV + LI+ + + G+  D   VFDEM
Sbjct: 164 TYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              + + W S+I   A+      A+ LF  M   G      T+  V+ AC  L  LELG 
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG- 279

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            + A++  +    + ++ NALVDMY KCG+++ A ++F + K+R+++  +T++S   + G
Sbjct: 280 -MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSI 377
            ++EAL + + M   G +P+ +T++  + A +  G L  G     Y  R+   L G D +
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG----WYYFRSMKKLYGIDPV 394

Query: 378 ---CNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
                 MID+  K GK + A ++ + M      V+W +L+  
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 135/262 (51%), Gaps = 11/262 (4%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L++C  +++++  HC I+K+GL       S V    A +  F  L   + A   +  D  
Sbjct: 169 LRSCNGMSDVRMLHCGIIKEGLE------SDVFVRSALIDVFAKLGEPEDALSVF--DEM 220

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            +    ++NS+I G++       A+ L+  +   G + ++ T   VL ACT  +    G+
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q H  IVK  +D+D+ + N L++ Y +CG + D  RVF++M ER+V++W+++I   A+  
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMV 277
             +EA+ LF  M   G KPN +T+V V+ AC+    LE G      + +L G+       
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398

Query: 278 NALVDMYMKCGAVDTAKQLFGE 299
             ++D+  K G +D A +L  E
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNE 420


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/609 (37%), Positives = 352/609 (57%), Gaps = 32/609 (5%)

Query: 237 PNSVTMVCVISACAKLQN-LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           P+ +T+   + + ++L + L  G+++ A   +L    N  ++ +L+ +Y KCG +  A++
Sbjct: 68  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F E    + V    +++ Y+  G  REA+ +      +G RPD  T +  ++A A++ D
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L  G        + G+     +    +D+Y+KCG  EMA                     
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCG--EMA--------------------- 224

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
                    AREVF +M  +D ++W  M+GG        EA++LF  M +E +K D   +
Sbjct: 225 --------KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAV 276

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
            G  SAC  LGALDL +     ++ +    +  L TAL+DM+A+CG    A  VF++M K
Sbjct: 277 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRK 336

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
           +D+  W A I  + M G+ + A  L  +M + G+K +   F+G+L +C+H GL+  G   
Sbjct: 337 KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 396

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           F +MT ++ +SP+I HYGCMVDLL RAGLL EA  L+  MP+  N VI G+LL  C+ H+
Sbjct: 397 FHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR 456

Query: 656 NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
           N ++A +  +++  L+P  SG +V+LSNIY++ G+W + A++RL MK +G+ K+P  S +
Sbjct: 457 NTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 516

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           E  GKVHEF  GD+SHP  + I   L E+   ++  GY P    V+ DV+++EK++ L H
Sbjct: 517 EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVH 576

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+AF L+ T     IRV KNLR+C DCH+  KLVS++  REIIVRDNNRFH FR 
Sbjct: 577 HSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRD 636

Query: 836 GSCSCSDFW 844
           GSCSC+D+W
Sbjct: 637 GSCSCNDYW 645



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 197/442 (44%), Gaps = 48/442 (10%)

Query: 136 PDKFTFPFVLNACTK-SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           P   T P  L + ++       G Q+H   +K+    +  V   L++ Y +CG +   +R
Sbjct: 68  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFDEM   + V WT+LI A       +EAV++       G++P+S T V V++ACA++ +
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G+ V    ++ G+  +  +  A VD+Y+KCG +  A+++F + + ++ V    ++  
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y   G  REAL +   M   G +PD   +  A+SA  +LG L  GR     V       W
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV------DW 301

Query: 375 DSICN------TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           D   +       +IDMY KCG    A  +F  M  K ++ WN++I GL            
Sbjct: 302 DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL------------ 349

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
              M G + I                 A  L   M    +K++  T +G+  +C + G +
Sbjct: 350 --GMTGHEKI-----------------AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 390

Query: 489 -DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            D  ++ +   +   I   ++    +VD+ +R G  Q A Q+   M    + A    +GA
Sbjct: 391 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP---MPANAVILGA 447

Query: 548 MAMEGNGEQAVELFNEMLRQGI 569
           +       +  EL   +L+Q I
Sbjct: 448 LLGGCKIHRNTELAEHVLKQLI 469



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 177/390 (45%), Gaps = 18/390 (4%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H   LK      P  ++ ++   A+ G    L  AQ+ FD          +   + +
Sbjct: 91  EQLHARSLKLPSHTNPHVLTSLLSLYAKCGL---LHRAQRVFD-----EMPHPSTVPWTA 142

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI  Y   G   EA+ +       G+ PD FT   VL AC + +    G  V  A  + G
Sbjct: 143 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEG 202

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
             + VFV    ++ Y +CG++   R VFD+M  ++ V+W +++   A    P+EA+ LF 
Sbjct: 203 VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFL 262

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M  EG+KP+   +   +SAC +L  L+LG +    +D      N ++  AL+DMY KCG
Sbjct: 263 AMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCG 322

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +   A  +F + + +++++ N ++      G  + A A++ +M   G + +  T +  + 
Sbjct: 323 STVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLC 382

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           +    G +  GR     M   Y +   +E +      M+D+  + G  + A ++ D M  
Sbjct: 383 SCTHTGLIQDGRRYFHNMTKLYHISPRIEHY----GCMVDLLSRAGLLQEAHQLVDDMPM 438

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               V   +L+ G   + + E A  V  ++
Sbjct: 439 PANAVILGALLGGCKIHRNTELAEHVLKQL 468


>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
 gi|223948835|gb|ACN28501.1| unknown [Zea mays]
          Length = 599

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/552 (42%), Positives = 329/552 (59%), Gaps = 33/552 (5%)

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQ 352
           + LF +  D      N+++      G A  ALA+   ML  G PRP+  T+  A+ A A 
Sbjct: 80  RNLFDQIPDPTAFCYNSLIRALPAAGSA-PALAVYRRMLRAGSPRPNSFTLAFALKACAA 138

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           +     GR  H   LR GL     +   ++++Y KC +  +A  +FD M+          
Sbjct: 139 VPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMA---------- 188

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
                  GD             ++ ++W+ M+ G ++  M  EA+ LFR M +  ++ D 
Sbjct: 189 -------GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDE 228

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           VTMV V SAC   GALDL KW++AYI++ GI  D++L+TAL+DM+A+CG  +RA  VF  
Sbjct: 229 VTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDA 288

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M ++D  AW+A I   A+ G  E A+ LF+ ML   ++P+++ F+GVL+AC+H GLV  G
Sbjct: 289 MVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDG 348

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              +  M ++ G+ P + +YGCMVDLL R+GLL +A   +  MPV PN VIW +LL AC+
Sbjct: 349 RRYWSIMQNL-GIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACK 407

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
               +DIA  A +R+ EL+P     +VLLSN+YAS  +W  V+ +R +MK + +  + G 
Sbjct: 408 SSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGR 467

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
           SSIE+NG +HEF   D+SHPE+  I  +LREM  R+R AG+ P    VL DV E+EK+  
Sbjct: 468 SSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAA 527

Query: 773 LSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHF 832
           L  HSE+LA+A+GL+ T     IRVVKNLR C DCH  AK++SK Y+REI+VRD  RFH 
Sbjct: 528 LCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHK 587

Query: 833 FRQGSCSCSDFW 844
           F  GSCSC DFW
Sbjct: 588 FMGGSCSCKDFW 599



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 188/377 (49%), Gaps = 8/377 (2%)

Query: 20  LTNQHKAKTTPKDSPS---IGSLKNCKTLNELKQPHCHILKQGLGHKPSY--ISKVVCTC 74
           L    +A T P+++     +  ++ C  L  L+  H H+ +  L    +   +SK++ +C
Sbjct: 3   LLKPKEAATLPREALEAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASC 62

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG- 133
                  +   A  ++   + D     T F YNSLIR     G    A+++Y  +   G 
Sbjct: 63  VSAPAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAG-SAPALAVYRRMLRAGS 121

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
             P+ FT  F L AC    A GEG Q+H   ++ G     +V+  L+N Y +C  +   R
Sbjct: 122 PRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALAR 181

Query: 194 RVFDEMS-ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            VFD M+ ++N+V+W++++   +R  +  EA+ LF EM   G++P+ VTMV VISACAK 
Sbjct: 182 TVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKA 241

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             L+LG  V AYID  G+  +  +  AL+DMY KCG ++ A+ +F    +++    + ++
Sbjct: 242 GALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMI 301

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
             +   GL  +AL +   ML    RP+ VT +  +SA A  G +  GR     +   G++
Sbjct: 302 VGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIK 361

Query: 373 GWDSICNTMIDMYMKCG 389
                   M+D+  + G
Sbjct: 362 PSMENYGCMVDLLCRSG 378



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 161/332 (48%), Gaps = 36/332 (10%)

Query: 193 RRVFDEMSERNVVSWTSLICAC-ARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACA 250
           R +FD++ +     + SLI A  A    P  AVY    M+  G  +PNS T+   + ACA
Sbjct: 80  RNLFDQIPDPTAFCYNSLIRALPAAGSAPALAVYR--RMLRAGSPRPNSFTLAFALKACA 137

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCN 309
            +     G ++ A     G+  +A +   L+++Y KC  V  A+ +F G   D+NLV  +
Sbjct: 138 AVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWS 197

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            ++S Y R+G+  EAL +  EM   G  PD VTM+S +SA A+ G L  G+  H Y+ R 
Sbjct: 198 AMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRK 257

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G+     +   +IDMY KCG  E A  +FD M  K   +W+++I G   +G         
Sbjct: 258 GITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHG--------- 308

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                                 + E+A+ LF  ML  +++ + VT +GV SAC + G ++
Sbjct: 309 ----------------------LVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVE 346

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
             +  ++ ++  GI   M+    +VD+  R G
Sbjct: 347 DGRRYWSIMQNLGIKPSMENYGCMVDLLCRSG 378



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 172/350 (49%), Gaps = 17/350 (4%)

Query: 9   PLVLATPTVTTLTNQHKAKTTPKDSPSIG-SLKNCKTL---NELKQPHCHILKQGLGHKP 64
           P   + P +       +A +   +S ++  +LK C  +    E +Q H   L+QGL    
Sbjct: 102 PAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSA 161

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
              + ++   A+    E +  A+  FD    D      L  +++++ GYS +G+  EA+ 
Sbjct: 162 YVQTGLLNLYAKC---EQVALARTVFDGMAGDK----NLVAWSAMVSGYSRVGMVNEALG 214

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L+ E+   G+ PD+ T   V++AC K+ A   G  VH  I + G   D+ +   LI+ Y 
Sbjct: 215 LFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYA 274

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG I   R VFD M E++  +W+++I   A   L ++A+ LF  M+E  ++PN+VT + 
Sbjct: 275 KCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIG 334

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ-LFGECKDR 303
           V+SACA    +E G R  + +  LG+K +      +VD+  + G +D A   + G     
Sbjct: 335 VLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSP 394

Query: 304 NLVLCNTIM---SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           N V+  T++    +  R+ +A  A   L E+  H   P+   +LS + AS
Sbjct: 395 NSVIWRTLLVACKSSNRIDIAESATKRLLELEPHN--PENYVLLSNLYAS 442


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/709 (34%), Positives = 390/709 (55%), Gaps = 25/709 (3%)

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           F  P +L  C       +  ++H  IVK G  +D F+   L+N Y +CG +   R+VFDE
Sbjct: 71  FYVP-ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDE 129

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           +  RNVVSWT+L+        P+ AV +F EM+E G  P + T+   +SA + L + ELG
Sbjct: 130 LPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELG 189

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            ++  Y  +  ++ +A + N+L  +Y KCG+++ A + F   +D+N++   T++S +   
Sbjct: 190 KQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDN 249

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G A   L    EML     P+  T+ SA+S    +  L  G   H   ++ G E    I 
Sbjct: 250 GEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIK 309

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N+++ +Y+KCG    A ++FD M   ++V+WN++IAG  +  D             +D  
Sbjct: 310 NSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDF-----------AKD-- 356

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                   L       EA+ +F  +    +K D  T   V S C  L AL+  + ++A  
Sbjct: 357 -------DLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQT 409

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K G   D+ + TALV+M+ +CG  +RA + F  M  R + +WT+ I   A  G  +QA+
Sbjct: 410 IKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQAL 469

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
            LF +M   G++P+ I FVGVL+ACSH G+V++    F+ M + + ++P + HY C++D+
Sbjct: 470 LLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDM 529

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
             R G L EA D IK M +EPN+ IW  L+A C+    +++  YAAE++  L P+ +  +
Sbjct: 530 FVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETY 589

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
            LL N+Y SAGKW  V+RVR  MKE+ + +L   S I +  K++ F     SH +   + 
Sbjct: 590 NLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMY 649

Query: 739 SMLREMNCRLRDAGY----VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP 794
            +L  ++ + +  GY      ++T+   D DE++    + +HSEKLA+AFGL++TS  +P
Sbjct: 650 ELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVP 709

Query: 795 IRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           IRV K++ +C DCH+F +++S +  REII+RD+ R H F  G CSC DF
Sbjct: 710 IRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 257/544 (47%), Gaps = 58/544 (10%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYI-SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           K +++ ++ H HI+K G  HK +++ + +V   A+ GT E+   A+K FD   + N  S 
Sbjct: 83  KLVSDAQKIHAHIVKTG-AHKDAFLMTFLVNVYAKCGTMET---ARKVFDELPRRNVVS- 137

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
               + +L+ GY        A+ ++ E+   G  P  +T    L+A +   +   G Q+H
Sbjct: 138 ----WTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIH 193

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G  +K   + D  + N L + Y +CG +    + F  + ++NV+SWT++I A        
Sbjct: 194 GYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAA 253

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
             +  F EM+ E ++PN  T+   +S C  +Q+L++G ++ +   +LG ++N  + N+++
Sbjct: 254 TGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIM 313

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR-LGLAR----------EALAILDE 330
            +Y+KCG +  AK+LF E +  +LV  N +++ + R +  A+          EAL+I  +
Sbjct: 314 YLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLK 373

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           +   G +PD  T  S +S  + L  L  G   H   ++ G      +   +++MY KCG 
Sbjct: 374 LNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGS 433

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A + F  MS +T++SW S+I G  +NG  + A  +F +M           L G    
Sbjct: 434 IERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDM----------RLAG---- 479

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQ 508
                            ++ +++T VGV SAC + G +D A   Y  + KN   I   M 
Sbjct: 480 -----------------VRPNKITFVGVLSACSHAGMVDEA-LDYFQMMKNEYKITPVMD 521

Query: 509 LATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
               L+DMF R G    A    + M+ + +   W+  I     +G  E       ++L  
Sbjct: 522 HYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLL-- 579

Query: 568 GIKP 571
            +KP
Sbjct: 580 NLKP 583



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 196/430 (45%), Gaps = 44/430 (10%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
            + EG K  S   V ++  C   + +    ++ A+I + G   +A ++  LV++Y KCG 
Sbjct: 60  FIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGT 119

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           ++TA+++F E   RN+V   T+M+ YV       A+ +  EML  G  P   T+ +A+SA
Sbjct: 120 METARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSA 179

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           S+ L     G+  HGY ++  +E   SI N++  +Y KCG  E A + F  + +K V+SW
Sbjct: 180 SSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISW 239

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            ++I+    NG+  +  + F E                               MLSE ++
Sbjct: 240 TTVISAWGDNGEAATGLQFFVE-------------------------------MLSECVE 268

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +  T+    S C  + +LD+   I++   K G   ++ +  +++ ++ +CG    A ++
Sbjct: 269 PNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKL 328

Query: 530 FRRMEKRDVSAWTAAIGA-----------MAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           F  ME   +  W A I             +A    G +A+ +F ++ R G+KPD   F  
Sbjct: 329 FDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSS 388

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL+ CS    + QG  +  + T   G    +V    +V++  + G +  A      M + 
Sbjct: 389 VLSVCSSLVALEQGEQV-HAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIR 447

Query: 639 PNDVIWGSLL 648
              + W S++
Sbjct: 448 -TLISWTSMI 456


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/683 (35%), Positives = 378/683 (55%), Gaps = 38/683 (5%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D   F  +L++C +S +  +  ++H  I+K  F  ++F++N L++ YG+CG   D R+VF
Sbjct: 18  DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77

Query: 197 DEMSERNVV-------------------------------SWTSLICACARRDLPKEAVY 225
           D M +RN                                 SW +++   A+ D  +EA+ 
Sbjct: 78  DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F +M  E    N  +    +SACA L +L +G ++ A I +     +  M +ALVDMY 
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG V  A++ F     RN+V  N++++ Y + G A +AL +   M+ +G  PD +T+ S
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNK 404
            VSA A    +  G   H  V++      D +  N ++DMY KC +   A  +FD M  +
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VVS  S++ G  +   V++AR +FS M  ++ +SWN ++ G TQ    EEA+ LF ++ 
Sbjct: 318 NVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLK 377

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI------HCDMQLATALVDMFA 518
            E I     T   + +AC  L  L L +  +  I K+G         D+ +  +L+DM+ 
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYM 437

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG  +    VF RM +RDV +W A I   A  G G  A+E+F +ML  G KPD +  +G
Sbjct: 438 KCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIG 497

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL+ACSH GLV +G   F SM    G++P   H+ CMVDLLGRAG L EA DLI++MP++
Sbjct: 498 VLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQ 557

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P++V+WGSLLAAC+ H N+++  Y AE++ E+DP  SG +VLLSN+YA  G+W +V RVR
Sbjct: 558 PDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVR 617

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
            QM+++G+ K PG S IE+  +VH F   D+ HP   +I  +L+ +  +++ AGYVP+  
Sbjct: 618 KQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEAD 677

Query: 759 NVLLDVDEQEKKYLLSHHSEKLA 781
           +  +  +E + + +L    E  A
Sbjct: 678 DDEICEEESDSELVLHFEMETEA 700



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 263/592 (44%), Gaps = 103/592 (17%)

Query: 33  SPSIGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKA 89
           SP    L +C   K+  + ++ H  I+K     +    +++V    + G FE    A+K 
Sbjct: 20  SPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFED---ARKV 76

Query: 90  FDYYIKDNETSATLFM--------------------------YNSLIRGYSCIGLGVEAI 123
           FD   + N  S    +                          +N+++ G++      EA+
Sbjct: 77  FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
             +V++     + ++++F   L+AC   +    G+Q+H  I K  +  DV++ + L++ Y
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            +CG +   +R FD M+ RN+VSW SLI    +     +A+ +F  M++ G++P+ +T+ 
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMV-NALVDMYMKC--------------- 287
            V+SACA    +  G ++ A + +     N L++ NALVDMY KC               
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316

Query: 288 ----------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
                            +V  A+ +F    ++N+V  N +++ Y + G   EA+ +   +
Sbjct: 317 RNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLL 376

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL---EGWDS---ICNTMIDMY 385
                 P   T  + ++A A L DL  GR  H  +L++G     G +S   + N++IDMY
Sbjct: 377 KRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMY 436

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
           MKCG  E  C +F+ M  + VVSWN++I G  +NG   +A E+                 
Sbjct: 437 MKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEI----------------- 479

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIH 504
                         FR ML    K D VTM+GV SAC + G ++   ++ ++   + G+ 
Sbjct: 480 --------------FRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLA 525

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
                 T +VD+  R G    A  + + M  + D   W + + A  + GN E
Sbjct: 526 PMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIE 577


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/797 (31%), Positives = 410/797 (51%), Gaps = 40/797 (5%)

Query: 49   KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
            +Q    ++K GL  K +  + ++     MG  +   YA      YI D  +      +NS
Sbjct: 270  RQIIGQVVKSGLESKLAVENSLISMLGSMGNVD---YAN-----YIFDQMSERDTISWNS 321

Query: 109  LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
            +   Y+  G   E+  ++  +  F    +  T   +L+          G  +HG +VKMG
Sbjct: 322  IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 381

Query: 169  FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            FD  V V N L+  Y   G  V+   VF +M  ++++SW SL+ +        +A+ L  
Sbjct: 382  FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 441

Query: 229  EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
             M+  G   N VT    ++AC      E G  +   +   G+  N ++ NALV MY K G
Sbjct: 442  SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 501

Query: 289  AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
             +  ++++  +   R++V  N ++  Y       +ALA    M + G   + +T++S +S
Sbjct: 502  EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 561

Query: 349  ASAQLGDLL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A    GDLL  G+  H Y++  G E  + + N++I MY KCG                  
Sbjct: 562  ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG------------------ 603

Query: 408  SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                         D+ S++++F+ +  R+ I+WN ML         EE ++L   M S  
Sbjct: 604  -------------DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 650

Query: 468  IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
            + +D+ +     SA   L  L+  + ++    K G   D  +  A  DM+++CG+    +
Sbjct: 651  VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 710

Query: 528  QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            ++      R + +W   I A+   G  E+    F+EML  GIKP  + FV +LTACSHGG
Sbjct: 711  KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 770

Query: 588  LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
            LV++G   +  +    G+ P I H  C++DLLGR+G L EA   I  MP++PND++W SL
Sbjct: 771  LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 830

Query: 648  LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
            LA+C+ H N+D    AAE +++L+PE   V+VL SN++A+ G+W +V  VR QM  + I+
Sbjct: 831  LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 890

Query: 708  KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
            K    S +++  KV  F  GD +HP+   I + L ++   ++++GYV D +  L D DE+
Sbjct: 891  KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEE 950

Query: 768  EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
            +K++ L +HSE+LA+A+ L+ST +   +R+ KNLR+C DCHS  K VS+V  R I++RD 
Sbjct: 951  QKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQ 1010

Query: 828  NRFHFFRQGSCSCSDFW 844
             RFH F +G CSC D+W
Sbjct: 1011 YRFHHFERGLCSCKDYW 1027



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/577 (25%), Positives = 263/577 (45%), Gaps = 65/577 (11%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  +  A+  FD     NE S     +N+++ G   +GL +E +  + ++   GI P  F
Sbjct: 120 FGRVKPARHLFDIMPVRNEVS-----WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 174

Query: 140 TFPFVLNACTKS-SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
               ++ AC +S S F EGVQVHG + K G   DV+V   +++ YG  G +   R+VF+E
Sbjct: 175 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 234

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M +RNVVSWTSL+   + +  P+E + ++                         ++  LG
Sbjct: 235 MPDRNVVSWTSLMVGYSDKGEPEEVIDIY-------------------------KDESLG 269

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            ++   + + G+++   + N+L+ M    G VD A  +F +  +R+ +  N+I + Y + 
Sbjct: 270 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 329

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G   E+  I   M       +  T+ + +S    +     GR  HG V++ G +    +C
Sbjct: 330 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 389

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           NT++ MY   G+   A  +F  M  K ++SWNSL+A  + +G     R +          
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG-----RSL---------- 434

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                           +A+ L   M+S    V+ VT     +AC      +  + ++  +
Sbjct: 435 ----------------DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 478

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
             +G+  +  +  ALV M+ + G+   + +V  +M +RDV AW A IG  A + + ++A+
Sbjct: 479 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 538

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTAC-SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
             F  M  +G+  + I  V VL+AC   G L+ +G  L   +      S + V    ++ 
Sbjct: 539 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK-NSLIT 597

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +  + G L  + DL   +    N + W ++LAA   H
Sbjct: 598 MYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 633



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 276/611 (45%), Gaps = 77/611 (12%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQM---GTFESLTYAQKAFDYYIKDNETSATLFMY 106
           Q H  + K GL      +S V  + A +   G +  ++ ++K F+     N  S     +
Sbjct: 195 QVHGFVAKSGL------LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS-----W 243

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
            SL+ GYS  G   E I +Y                       K  + G   Q+ G +VK
Sbjct: 244 TSLMVGYSDKGEPEEVIDIY-----------------------KDESLGR--QIIGQVVK 278

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G +  + VEN LI+  G  G++     +FD+MSER+ +SW S+  A A+    +E+  +
Sbjct: 279 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 338

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F  M     + NS T+  ++S    + + + G  +   + ++G  +   + N L+ MY  
Sbjct: 339 FSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 398

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
            G    A  +F +   ++L+  N++M+++V  G + +AL +L  M+  G   + VT  SA
Sbjct: 399 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 458

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           ++A         GR+ HG V+ +GL     I N ++ MY K G+   + R+   M  + V
Sbjct: 459 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 518

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+WN+LI G  ++ D                                ++A+  F+ M  E
Sbjct: 519 VAWNALIGGYAEDEDP-------------------------------DKALAAFQTMRVE 547

Query: 467 RIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
            +  + +T+V V SAC   G  L+  K ++AYI   G   D  +  +L+ M+A+CGD   
Sbjct: 548 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 607

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           +  +F  ++ R++  W A + A A  G+GE+ ++L ++M   G+  D   F   L+A + 
Sbjct: 608 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 667

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-- 643
             ++ +G  L      + G       +    D+  + G +GE   ++K +P   N  +  
Sbjct: 668 LAVLEEGQQLHGLAVKL-GFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPS 723

Query: 644 WGSLLAACQKH 654
           W  L++A  +H
Sbjct: 724 WNILISALGRH 734



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 1/160 (0%)

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
           +V+  N+LI    K G V+ AR +F  MP R+ +SWNTM+ G+ +  ++ E ME FR M 
Sbjct: 106 SVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC 165

Query: 465 SERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
              IK     +  + +ACG  G++      ++ ++ K+G+  D+ ++TA++ ++   G  
Sbjct: 166 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 225

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             + +VF  M  R+V +WT+ +   + +G  E+ ++++ +
Sbjct: 226 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD 265



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 25/169 (14%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           ++A   K  +   +     L++M+ + G  + A  +F  M  R+  +W   +  +   G 
Sbjct: 94  VHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGL 153

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG--------- 604
             + +E F +M   GIKP S V   ++TAC   G       +FR    +HG         
Sbjct: 154 YLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG------SMFREGVQVHGFVAKSGLLS 207

Query: 605 ---VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
              VS  I+H      L G  GL+  +  + + MP + N V W SL+  
Sbjct: 208 DVYVSTAILH------LYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVG 249


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/712 (34%), Positives = 378/712 (53%), Gaps = 32/712 (4%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +L D      V+    K+     G Q+H  ++  G+    F+ N L+N Y +CG++    
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           ++FD M +RN+VSWT++I   ++     EA+  F  M   G  P        I ACA L 
Sbjct: 61  KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           ++E+G ++     + G+ +   + + L DMY KCGA+  A ++F E   ++ V    ++ 
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y ++G   EAL    +M+      D+  + S + A   L     GR  H  V++ G E 
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS-EM 432
              + N + DMY K G                               D+ESA  VF  + 
Sbjct: 241 DIFVGNALTDMYSKAG-------------------------------DMESASNVFGIDS 269

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             R+ +S+  ++ G  +    E+ + +F  +  + I+ +  T   +  AC    AL+   
Sbjct: 270 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 329

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++A + K     D  +++ LVDM+ +CG  ++A+Q F  +      AW + +      G
Sbjct: 330 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHG 389

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G+ A+++F  M+ +G+KP++I F+ +LT CSH GLV +G   F SM   +GV P   HY
Sbjct: 390 LGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY 449

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            C++DLLGRAG L EA + I  MP EPN   W S L AC+ H + ++   AAE++ +L+P
Sbjct: 450 SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEP 509

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           + SG  VLLSNIYA+  +W +V  VR++M++  ++KLPG S ++V  K H F + D SHP
Sbjct: 510 KNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHP 569

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
             + I   L  +  +++ AGYVP   +V LD+D+  K+ LL  HSE++A+AF LIS    
Sbjct: 570 RKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIG 629

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PI V KNLR+C DCHS  K +SKV  R+IIVRDN+RFH F  GSCSC D+W
Sbjct: 630 KPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 225/478 (47%), Gaps = 43/478 (8%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L +A K FD   + N     L  + ++I G S      EAI  +  +   G +P +F F 
Sbjct: 56  LDHALKLFDTMPQRN-----LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFS 110

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
             + AC    +   G Q+H   +K G   ++FV + L + Y +CG + D  +VF+EM  +
Sbjct: 111 SAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK 170

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + VSWT++I   ++    +EA+  F +M++E +  +   +   + AC  L+  + G  V 
Sbjct: 171 DEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVH 230

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG---ECKDRNLVLCNTIMSNYVRLG 319
           + + +LG +++  + NAL DMY K G +++A  +FG   EC  RN+V    ++  YV   
Sbjct: 231 SSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC--RNVVSYTCLIDGYVETE 288

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              + L++  E+   G  P+  T  S + A A    L  G   H  V++   +    + +
Sbjct: 289 QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS 348

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++DMY KCG  E A + FD + + T ++WNSL++             VF          
Sbjct: 349 ILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVS-------------VFG--------- 386

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYI 498
                    Q  + ++A+++F  M+   +K + +T + + + C + G ++    + Y+  
Sbjct: 387 ---------QHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMD 437

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +  G+    +  + ++D+  R G  + A +   RM  + +   W + +GA  + G+ E
Sbjct: 438 KTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 124/231 (53%), Gaps = 14/231 (6%)

Query: 80  FESLTYAQKAF-DYYIK--DNETSATLFMYNSLIR---GYSCIGLGV-------EAISLY 126
           FES  +   A  D Y K  D E+++ +F  +S  R    Y+C+  G        + +S++
Sbjct: 238 FESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVF 297

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
           VEL   GI P++FTF  ++ AC   +A  +G Q+H  ++K+ FD D FV + L++ YG+C
Sbjct: 298 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC 357

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G +    + FDE+ +   ++W SL+    +  L K+A+ +F  MV+ G+KPN++T + ++
Sbjct: 358 GLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLL 417

Query: 247 SACAKLQNLELG-DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           + C+    +E G D   +     G+       + ++D+  + G +  AK+ 
Sbjct: 418 TGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEF 468


>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/643 (36%), Positives = 369/643 (57%), Gaps = 41/643 (6%)

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +S TS++C      LP   +    +  E   K N    + ++  C  ++  +   +V A+
Sbjct: 1   MSGTSVLCQSHLLSLPNSPL----QSSELNAKFNEQGWLSLLKRCKSMEEFK---KVHAH 53

Query: 265 IDELGMKANALMVNALVD--MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           I +LG+  ++   + LV      + G+++ A  +F + ++      NT++   V      
Sbjct: 54  ILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLE 113

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL +  EML  G  PD  T    + A + L  L  G   H +V   GLE    + N +I
Sbjct: 114 EALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLI 173

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY KCG                                +E A  VF +M  +   SW++
Sbjct: 174 SMYGKCGA-------------------------------IEHAGVVFEQMDEKSVASWSS 202

Query: 443 MLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           ++G      M+ E + L   M  E R + +   +V   SAC +LG+ +L + I+  + +N
Sbjct: 203 IIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRN 262

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
               ++ + T+L+DM+ +CG  ++ + VF+ M  ++  ++T  I  +A+ G G +A+ +F
Sbjct: 263 ISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVF 322

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           ++ML +G+ PD +V+VGVL+ACSH GLV +G+  F  M   H + P I HYGCMVDL+GR
Sbjct: 323 SDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGR 382

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG+L EA DLIKSMP++PNDV+W SLL+AC+ H N++I   AA+ I +L+    G +++L
Sbjct: 383 AGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVL 442

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           +N+YA A KW NVAR+R +M E+ + + PG S +E N  V++F S D+S P+   I  M+
Sbjct: 443 ANMYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMI 502

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
           ++M  +L+  GY PD++ VLLDVDE EK+  L HHS+KLA+AF LI TS+  P+R+ +NL
Sbjct: 503 QQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNL 562

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH++ K +S +Y+REI VRD+NRFH F+ G+CSC D+W
Sbjct: 563 RMCNDCHTYTKFISVIYEREITVRDSNRFHHFKDGTCSCKDYW 605



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 216/438 (49%), Gaps = 40/438 (9%)

Query: 11  VLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV 70
           +L+ P     +++  AK   +   S+  LK CK++ E K+ H HILK GL +     S +
Sbjct: 12  LLSLPNSPLQSSELNAKFNEQGWLSL--LKRCKSMEEFKKVHAHILKLGLFYDSFCGSNL 69

Query: 71  VCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
           V +CA +  + S+ YA   F    +  E   + F YN++IRG        EA+ LYVE+ 
Sbjct: 70  VASCA-LSRWGSMEYACSIF----RQIEEPGS-FEYNTMIRGNVNSMDLEEALLLYVEML 123

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
             GI PD FT+PFVL AC+   A  EGVQ+H  +   G + DVFV+N LI+ YG+CG I 
Sbjct: 124 ERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIE 183

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI-KPNSVTMVCVISAC 249
               VF++M E++V SW+S+I A A  ++  E + L  +M  EG  +     +V  +SAC
Sbjct: 184 HAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSAC 243

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             L +  LG  +   +     + N ++  +L+DMY+KCG+++    +F     +N     
Sbjct: 244 THLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYT 303

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            +++     G  REAL +  +ML  G  PD V  +  +SA +  G           +++ 
Sbjct: 304 VMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAG-----------LVKE 352

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G + ++ +                    F+HM   T+  +  ++  + + G ++ A ++ 
Sbjct: 353 GFQCFNRM-------------------QFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLI 393

Query: 430 SEMPGR-DHISWNTMLGG 446
             MP + + + W ++L  
Sbjct: 394 KSMPIKPNDVVWRSLLSA 411


>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 572

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/560 (39%), Positives = 347/560 (61%), Gaps = 32/560 (5%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G++D A  +F +  + +    NT++   V      EAL +  +M+  G  PD+ T   
Sbjct: 44  KWGSMDYACSIFTQIDEPSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPF 103

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A + LG +  G   HG+V + GLEG   + N++I+MY KCG                
Sbjct: 104 VLKACSLLGVVDEGIQVHGHVFKMGLEGDVIVQNSLINMYGKCG---------------- 147

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                          ++++A +VF+ M  +   SW+ ++G      M+ E + L   M S
Sbjct: 148 ---------------EIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSS 192

Query: 466 E-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           E R +V+  T+V V SAC +LG+ DL K I+  + +N    ++ + T+L+DM+ + G  +
Sbjct: 193 EGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLE 252

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
           + ++VF+ M +++  ++T  I  +A+ G G++A+++F+EM+ +G+ PD +V+VGV +ACS
Sbjct: 253 KGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACS 312

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLV +G   F+SM   H + P + HYGCMVDLLGR G+L EA +LIKSM ++PNDVIW
Sbjct: 313 HAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIW 372

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            SLL+AC+ H N++I   AAE +  L+   SG +++L+N+YA A KW +VA++R ++ E+
Sbjct: 373 RSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAER 432

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
            + + PG S IE   KV++F S D+S P+ N I  M+ +M  +L+  GY+PD + VLLDV
Sbjct: 433 NLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLDV 492

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           D++EKK  L  HS+KLA+AFGLI TS+  P+R+ +NLR+C DCH++ K +S +Y+REI V
Sbjct: 493 DDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIYEREITV 552

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD  RFH F+ GSCSC D+W
Sbjct: 553 RDRLRFHHFKNGSCSCKDYW 572



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 197/374 (52%), Gaps = 9/374 (2%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           + E KQ H H+LK G+      +S +V TCA +  + S+ YA   F    + +E S+  F
Sbjct: 11  MEEFKQVHAHVLKCGIFFDTFCMSNLVATCA-LTKWGSMDYACSIF---TQIDEPSS--F 64

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            YN++IRG        EA+ LYV++   G+ PDKFT+PFVL AC+      EG+QVHG +
Sbjct: 65  DYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHV 124

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            KMG + DV V+N LIN YG+CG+I +   VF+ M E++V SW+++I A A  ++  E +
Sbjct: 125 FKMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECL 184

Query: 225 YLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            L  +M  EG  +    T+V V+SAC  L + +LG  +   +     + N ++  +L+DM
Sbjct: 185 MLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDM 244

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y+K G ++   ++F    ++N      ++S     G  +EAL +  EM+  G  PD V  
Sbjct: 245 YVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVY 304

Query: 344 LSAVSASAQLGDLLCGRMCHGYV-LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           +   SA +  G +  G  C   +   + +E        M+D+  + G  + A  +   MS
Sbjct: 305 VGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMS 364

Query: 403 NK-TVVSWNSLIAG 415
            K   V W SL++ 
Sbjct: 365 IKPNDVIWRSLLSA 378



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 204/433 (47%), Gaps = 48/433 (11%)

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGEC-----GDIVDGRRVFDEMSERNVVSWTSL 210
           E  QVH  ++K G   D F   C+ N    C     G +     +F ++ E +   + ++
Sbjct: 13  EFKQVHAHVLKCGIFFDTF---CMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTM 69

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I         +EA+ L+ +M+E G++P+  T   V+ AC+ L  ++ G +V  ++ ++G+
Sbjct: 70  IRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGL 129

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           + + ++ N+L++MY KCG +  A  +F    ++++   + I+  +  + +  E L +L +
Sbjct: 130 EGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGK 189

Query: 331 MLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           M   G  R +  T+++ +SA   LG    G+  HG +LRN  E    +  ++IDMY+K G
Sbjct: 190 MSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSG 249

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             E   R+F +MS K   S+  +I+GL  +G  + A +VFSE                  
Sbjct: 250 CLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSE------------------ 291

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQ 508
                        M+ E +  D V  VGV SAC + G ++     +  ++ ++ I   +Q
Sbjct: 292 -------------MIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQ 338

Query: 509 LATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE-LFNE 563
               +VD+  R G  + A ++ + M  K +   W + + A  +  N   G+ A E LF  
Sbjct: 339 HYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLF-- 396

Query: 564 MLRQGIKPDSIVF 576
           ML Q    D +V 
Sbjct: 397 MLNQNNSGDYLVL 409



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 128/245 (52%), Gaps = 11/245 (4%)

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
            L K G ++ A  +F+++       +NTM+ G   +   EEA+ L+  M+   ++ D+ T
Sbjct: 41  ALTKWGSMDYACSIFTQIDEPSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFT 100

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              V  AC  LG +D    ++ ++ K G+  D+ +  +L++M+ +CG+ + A  VF  M+
Sbjct: 101 YPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMD 160

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQG- 592
           ++ V++W+A IGA A      + + L  +M  +G  + +    V VL+AC+H G  + G 
Sbjct: 161 EKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGK 220

Query: 593 -WH--LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
             H  L R++++++     +V    ++D+  ++G L + L + K+M  E N   +  +++
Sbjct: 221 CIHGILLRNISELN-----VVVKTSLIDMYVKSGCLEKGLRVFKNMS-EKNRYSYTVMIS 274

Query: 650 ACQKH 654
               H
Sbjct: 275 GLAIH 279



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 85/218 (38%), Gaps = 50/218 (22%)

Query: 97  NETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
           N +    + Y  +I G +  G G EA+ ++ E+   G+ PD   +  V +AC+ +    E
Sbjct: 260 NMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEE 319

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G+Q   +   M F+  +                           E  V  +  ++    R
Sbjct: 320 GLQCFKS---MQFEHKI---------------------------EPTVQHYGCMVDLLGR 349

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
             + KEA  L   M    IKPN V    ++SAC    NLE+G ++ A         N  M
Sbjct: 350 FGMLKEAYELIKSM---SIKPNDVIWRSLLSACKVHHNLEIG-KIAA--------ENLFM 397

Query: 277 VN--------ALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           +N         L +MY K    D   ++  +  +RNLV
Sbjct: 398 LNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLV 435


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/558 (40%), Positives = 329/558 (58%), Gaps = 32/558 (5%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
            ++D A QLF      ++VL N++   Y R     +A+++  + L +   PD  T  S +
Sbjct: 75  ASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLL 134

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A         G+  H   ++ GL     +C T+I+MY  C   + A R+FD +    VV
Sbjct: 135 KACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVV 194

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                                          S+N ++ G  + +   EA+ LFR + + +
Sbjct: 195 -------------------------------SYNAIITGYARSSRPNEALSLFRQLQARK 223

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           +K + VT++ V S+C  LGALDL KWI+ Y++KNG+   +++ TAL+DM+A+CG    A+
Sbjct: 224 LKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAI 283

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            VF  M  RD  AW+A I A AM G G+  + +F EM R  ++PD I F+G+L ACSH G
Sbjct: 284 SVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTG 343

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV++G+  F SM++++G+ P I HYGCMVDLLGRAGLL EA   I  +P++P  ++W +L
Sbjct: 344 LVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTL 403

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L++C  H N+++A     +I ELD    G +V+LSN+ A AGKW +V  +R  M  +G  
Sbjct: 404 LSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAV 463

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL-LDVDE 766
           K+PG SSIEV+  VHEF SGD  H     +   L E+   L+  GYVPD + V+  D+++
Sbjct: 464 KIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDMED 523

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EK+  L +HSEKLA++FGL++T     IRVVKNLR+C DCHS AKL+S + DREII+RD
Sbjct: 524 EEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRD 583

Query: 827 NNRFHFFRQGSCSCSDFW 844
             RFH F+ G CSC D+W
Sbjct: 584 VQRFHHFKDGKCSCGDYW 601



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 224/425 (52%), Gaps = 16/425 (3%)

Query: 15  PTVTTLTNQHKAK-TTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCT 73
           P +    +QH +   T   S  +  L  C +L ELKQ     +K  L +    ++K++ +
Sbjct: 8   PVIQQSPSQHSSYYNTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINS 67

Query: 74  CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
           C Q  T  S+ YA + F+   + +     + ++NS+ RGYS     ++AISL+++   + 
Sbjct: 68  CTQNPTTASMDYAHQLFEAIPQPD-----IVLFNSMFRGYSRSNAPLKAISLFIKALNYN 122

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +LPD +TFP +L AC  + AF +G Q+H   +K+G + + +V   LIN Y  C D+   +
Sbjct: 123 LLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQ 182

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           RVFDE+ E  VVS+ ++I   AR   P EA+ LF ++    +KPN VT++ V+S+CA L 
Sbjct: 183 RVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLG 242

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            L+LG  +  Y+ + G+     +  AL+DMY KCG++D A  +F     R+    + ++ 
Sbjct: 243 ALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIV 302

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLR 368
            Y   G  ++ +++ +EM     +PD +T L  + A +  G +  G      M   Y + 
Sbjct: 303 AYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGII 362

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNGDVESARE 427
            G++ +      M+D+  + G    A +  D +  K T + W +L++    +G++E A++
Sbjct: 363 PGIKHY----GCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQ 418

Query: 428 VFSEM 432
           V +++
Sbjct: 419 VMNQI 423



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 9/281 (3%)

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES---AREVFSEMPGRDHISWNTMLGG 446
           KQ  A  I  H+ N   +    LI    +N    S   A ++F  +P  D + +N+M  G
Sbjct: 43  KQIQAFSIKTHLQNDLQI-LTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRG 101

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
            ++ N   +A+ LF   L+  +  D  T   +  AC    A    K ++    K G++ +
Sbjct: 102 YSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNEN 161

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             +   L++M+A C D   A +VF  + +  V ++ A I   A      +A+ LF ++  
Sbjct: 162 PYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQA 221

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
           + +KP+ +  + VL++C+  G ++ G W         +G+   +     ++D+  + G L
Sbjct: 222 RKLKPNDVTVLSVLSSCALLGALDLGKW--IHEYVKKNGLDKYVKVNTALIDMYAKCGSL 279

Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKH-QNVDIAAYAAE 665
             A+ + +SM V      W +++ A   H Q  D+ +   E
Sbjct: 280 DGAISVFESMSVRDTQA-WSAMIVAYAMHGQGQDVMSMFEE 319


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/609 (37%), Positives = 352/609 (57%), Gaps = 32/609 (5%)

Query: 237  PNSVTMVCVISACAKLQN-LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
            P+ +T+   + + ++L + L  G+++ A   +L    N  ++ +L+ +Y KCG +  A++
Sbjct: 547  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606

Query: 296  LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
            +F E    + V    +++ Y+  G  REA+ +      +G RPD  T +  ++A A++ D
Sbjct: 607  VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666

Query: 356  LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
            L  G        + G+     +    +D+Y+KCG  EMA                     
Sbjct: 667  LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCG--EMA--------------------- 703

Query: 416  LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
                     AREVF +M  +D ++W  M+GG        EA++LF  M +E +K D   +
Sbjct: 704  --------KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAV 755

Query: 476  VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
             G  SAC  LGALDL +     ++ +    +  L TAL+DM+A+CG    A  VF++M K
Sbjct: 756  AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRK 815

Query: 536  RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
            +D+  W A I  + M G+ + A  L  +M + G+K +   F+G+L +C+H GL+  G   
Sbjct: 816  KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 875

Query: 596  FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
            F +MT ++ +SP+I HYGCMVDLL RAGLL EA  L+  MP+  N VI G+LL  C+ H+
Sbjct: 876  FHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR 935

Query: 656  NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
            N ++A +  +++  L+P  SG +V+LSNIY++ G+W + A++RL MK +G+ K+P  S +
Sbjct: 936  NTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 995

Query: 716  EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
            E  GKVHEF  GD+SHP  + I   L E+   ++  GY P    V+ DV+++EK++ L H
Sbjct: 996  EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVH 1055

Query: 776  HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
            HSEKLA+AF L+ T     IRV KNLR+C DCH+  KLVS++  REIIVRDNNRFH FR 
Sbjct: 1056 HSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRD 1115

Query: 836  GSCSCSDFW 844
            GSCSC+D+W
Sbjct: 1116 GSCSCNDYW 1124



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 197/442 (44%), Gaps = 48/442 (10%)

Query: 136 PDKFTFPFVLNACTK-SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           P   T P  L + ++       G Q+H   +K+    +  V   L++ Y +CG +   +R
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFDEM   + V WT+LI A       +EAV++       G++P+S T V V++ACA++ +
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G+ V    ++ G+  +  +  A VD+Y+KCG +  A+++F + + ++ V    ++  
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y   G  REAL +   M   G +PD   +  A+SA  +LG L  GR     V       W
Sbjct: 727 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV------DW 780

Query: 375 DSICN------TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           D   +       +IDMY KCG    A  +F  M  K ++ WN++I GL            
Sbjct: 781 DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL------------ 828

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
              M G + I                 A  L   M    +K++  T +G+  +C + G +
Sbjct: 829 --GMTGHEKI-----------------AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 869

Query: 489 -DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            D  ++ +   +   I   ++    +VD+ +R G  Q A Q+   M    + A    +GA
Sbjct: 870 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP---MPANAVILGA 926

Query: 548 MAMEGNGEQAVELFNEMLRQGI 569
           +       +  EL   +L+Q I
Sbjct: 927 LLGGCKIHRNTELAEHVLKQLI 948



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 177/390 (45%), Gaps = 18/390 (4%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H   LK      P  ++ ++   A+ G    L  AQ+ FD     +        + +
Sbjct: 570 EQLHARSLKLPSHTNPHVLTSLLSLYAKCGL---LHRAQRVFDEMPHPSTVP-----WTA 621

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI  Y   G   EA+ +       G+ PD FT   VL AC + +    G  V  A  + G
Sbjct: 622 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEG 681

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
             + VFV    ++ Y +CG++   R VFD+M  ++ V+W +++   A    P+EA+ LF 
Sbjct: 682 VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFL 741

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M  EG+KP+   +   +SAC +L  L+LG +    +D      N ++  AL+DMY KCG
Sbjct: 742 AMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCG 801

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +   A  +F + + +++++ N ++      G  + A A++ +M   G + +  T +  + 
Sbjct: 802 STVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLC 861

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           +    G +  GR     M   Y +   +E +      M+D+  + G  + A ++ D M  
Sbjct: 862 SCTHTGLIQDGRRYFHNMTKLYHISPRIEHY----GCMVDLLSRAGLLQEAHQLVDDMPM 917

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               V   +L+ G   + + E A  V  ++
Sbjct: 918 PANAVILGALLGGCKIHRNTELAEHVLKQL 947


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/609 (37%), Positives = 352/609 (57%), Gaps = 32/609 (5%)

Query: 237  PNSVTMVCVISACAKLQN-LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
            P+ +T+   + + ++L + L  G+++ A   +L    N  ++ +L+ +Y KCG +  A++
Sbjct: 523  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582

Query: 296  LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
            +F E    + V    +++ Y+  G  REA+ +      +G RPD  T +  ++A A++ D
Sbjct: 583  VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642

Query: 356  LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
            L  G        + G+     +    +D+Y+KCG  EMA                     
Sbjct: 643  LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCG--EMA--------------------- 679

Query: 416  LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
                     AREVF +M  +D ++W  M+GG        EA++LF  M +E +K D   +
Sbjct: 680  --------KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAV 731

Query: 476  VGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK 535
             G  SAC  LGALDL +     ++ +    +  L TAL+DM+A+CG    A  VF++M K
Sbjct: 732  AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRK 791

Query: 536  RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
            +D+  W A I  + M G+ + A  L  +M + G+K +   F+G+L +C+H GL+  G   
Sbjct: 792  KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRY 851

Query: 596  FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
            F +MT ++ +SP+I HYGCMVDLL RAGLL EA  L+  MP+  N VI G+LL  C+ H+
Sbjct: 852  FHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHR 911

Query: 656  NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
            N ++A +  +++  L+P  SG +V+LSNIY++ G+W + A++RL MK +G+ K+P  S +
Sbjct: 912  NTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 971

Query: 716  EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
            E  GKVHEF  GD+SHP  + I   L E+   ++  GY P    V+ DV+++EK++ L H
Sbjct: 972  EFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVH 1031

Query: 776  HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
            HSEKLA+AF L+ T     IRV KNLR+C DCH+  KLVS++  REIIVRDNNRFH FR 
Sbjct: 1032 HSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRD 1091

Query: 836  GSCSCSDFW 844
            GSCSC+D+W
Sbjct: 1092 GSCSCNDYW 1100



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 197/442 (44%), Gaps = 48/442 (10%)

Query: 136 PDKFTFPFVLNACTK-SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           P   T P  L + ++       G Q+H   +K+    +  V   L++ Y +CG +   +R
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFDEM   + V WT+LI A       +EAV++       G++P+S T V V++ACA++ +
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L  G+ V    ++ G+  +  +  A VD+Y+KCG +  A+++F + + ++ V    ++  
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
           Y   G  REAL +   M   G +PD   +  A+SA  +LG L  GR     V       W
Sbjct: 703 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV------DW 756

Query: 375 DSICN------TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           D   +       +IDMY KCG    A  +F  M  K ++ WN++I GL            
Sbjct: 757 DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGL------------ 804

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
              M G + I                 A  L   M    +K++  T +G+  +C + G +
Sbjct: 805 --GMTGHEKI-----------------AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 845

Query: 489 -DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            D  ++ +   +   I   ++    +VD+ +R G  Q A Q+   M    + A    +GA
Sbjct: 846 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP---MPANAVILGA 902

Query: 548 MAMEGNGEQAVELFNEMLRQGI 569
           +       +  EL   +L+Q I
Sbjct: 903 LLGGCKIHRNTELAEHVLKQLI 924



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 177/390 (45%), Gaps = 18/390 (4%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H   LK      P  ++ ++   A+ G    L  AQ+ FD     +        + +
Sbjct: 546 EQLHARSLKLPSHTNPHVLTSLLSLYAKCGL---LHRAQRVFDEMPHPSTVP-----WTA 597

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           LI  Y   G   EA+ +       G+ PD FT   VL AC + +    G  V  A  + G
Sbjct: 598 LITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEG 657

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
             + VFV    ++ Y +CG++   R VFD+M  ++ V+W +++   A    P+EA+ LF 
Sbjct: 658 VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFL 717

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M  EG+KP+   +   +SAC +L  L+LG +    +D      N ++  AL+DMY KCG
Sbjct: 718 AMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCG 777

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +   A  +F + + +++++ N ++      G  + A A++ +M   G + +  T +  + 
Sbjct: 778 STVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLC 837

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           +    G +  GR     M   Y +   +E +      M+D+  + G  + A ++ D M  
Sbjct: 838 SCTHTGLIQDGRRYFHNMTKLYHISPRIEHY----GCMVDLLSRAGLLQEAHQLVDDMPM 893

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               V   +L+ G   + + E A  V  ++
Sbjct: 894 PANAVILGALLGGCKIHRNTELAEHVLKQL 923


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/555 (39%), Positives = 332/555 (59%), Gaps = 37/555 (6%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT---MLSAVSA 349
           A  +F    + N+   NTI+  Y        A     +M++    PD  T   +L A+S 
Sbjct: 71  AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISK 130

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
           S  + +   G   H   +RNG E    + N+++ +Y  CG                    
Sbjct: 131 SLNVRE---GEAIHSVTIRNGFESLVFVQNSLLHIYAACG-------------------- 167

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                      D ESA +VF  M  RD ++WN+M+ G        EA+ LFR M  E ++
Sbjct: 168 -----------DTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVE 216

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D  T+V + SA   LGAL+L + ++ Y+ K G+  +  +  +L+D++A+CG  + A +V
Sbjct: 217 PDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRV 276

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M +R+  +WT+ I  +A+ G GE+A+ELF EM  QG+ P  I FVGVL ACSH G++
Sbjct: 277 FSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGML 336

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           ++G+  FR M +  G+ P+I HYGCMVDLL RAGL+ +A + I++MPV+PN VIW +LL 
Sbjct: 337 DEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLG 396

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC  H ++ +   A   +  L+P+ SG +VLLSN+YAS  +W++V  +R  M + G++K 
Sbjct: 397 ACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKT 456

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S +E+  +V+EFT GD SHP+  ++ ++L ++   L+  GYVP   NVL D++E+EK
Sbjct: 457 PGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEK 516

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +  LS+HSEK+A+AF L++T    PIRV+KNLR+C DCH   KL++K+YDREI++RD +R
Sbjct: 517 EQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIRDRSR 576

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR GSCSC D+W
Sbjct: 577 FHHFRGGSCSCKDYW 591



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 212/426 (49%), Gaps = 42/426 (9%)

Query: 28  TTPKD--SPSIGSLKNC-KTLNELKQPHCHILKQGLG-HKPSYISKVVCTCAQMGTFESL 83
           TTP++  +  I  L+ C  + ++LKQ H   ++ G+  + P     ++ T   +     +
Sbjct: 11  TTPENPLTKCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSA--PM 68

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
           +YA   F      N     +F +N++IRGY+       A   Y ++    + PD  T+PF
Sbjct: 69  SYAYNVFTVIHNPN-----VFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPF 123

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L A +KS    EG  +H   ++ GF+  VFV+N L++ Y  CGD     +VF+ M ER+
Sbjct: 124 LLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERD 183

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +V+W S+I   A    P EA+ LF EM  EG++P+  T+V ++SA A+L  LELG RV  
Sbjct: 184 LVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHV 243

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y+ ++G+  N+ + N+L+D+Y KCGA+  A+++F E  +RN V   +++      G   E
Sbjct: 244 YLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEE 303

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +  EM   G  P  +T +  + A +      CG +  G+                  
Sbjct: 304 ALELFKEMEGQGLVPSEITFVGVLYACSH-----CGMLDEGF------------------ 340

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNT 442
            Y +  K+E  C I   + +     +  ++  L + G V+ A E    MP + + + W T
Sbjct: 341 EYFRRMKEE--CGIIPRIEH-----YGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 393

Query: 443 MLGGLT 448
           +LG  T
Sbjct: 394 LLGACT 399


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/790 (32%), Positives = 414/790 (52%), Gaps = 36/790 (4%)

Query: 58   QGLGH--KPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSC 115
            Q LGH  +  +   V    + +  F S +  ++A   Y+ D+     +  +N++I  Y+ 
Sbjct: 968  QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC--YVFDHMNECDIISWNAMISAYAH 1025

Query: 116  IGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFV 175
             GL  E++  +  +       +  T   +L+ C+       G  +HG +VK+G D +V +
Sbjct: 1026 HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCI 1085

Query: 176  ENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI 235
             N L+  Y E G   D   VF  M+ER+++SW S++    +     + + +  E+++ G 
Sbjct: 1086 CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 1145

Query: 236  KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
              N VT    ++AC+  + L     V A I   G     ++ NALV MY K G +  AK+
Sbjct: 1146 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 1205

Query: 296  LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
            +       + V  N ++  +       EA+     +   G   + +TM+S + A +   D
Sbjct: 1206 VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDD 1265

Query: 356  LL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            LL  G   H +++  G E  D + N++I MY KCG                         
Sbjct: 1266 LLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCG------------------------- 1300

Query: 415  GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                  D+ S+  +F  +  +  I+WN M+         EEA+++F  M +  + +D+ +
Sbjct: 1301 ------DLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFS 1354

Query: 475  MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              G  +A   L  L+  + ++  + K G   D+ +  A +DM+ +CG+    +++  +  
Sbjct: 1355 FSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI 1414

Query: 535  KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
             R   +W   I A A  G  ++A E F+EML+ G KPD + FV +L+AC+HGGLV++G  
Sbjct: 1415 NRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA 1474

Query: 595  LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             + SMT   GV P I H  C++DLLGR+G L  A   IK MPV PND+ W SLLAAC+ H
Sbjct: 1475 YYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIH 1534

Query: 655  QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
             N+++A   AE + ELDP     +VL SN+ A++GKW +V  +R +M    I+K P  S 
Sbjct: 1535 GNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSW 1594

Query: 715  IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
            +++  KVH F  G++ HP+ + IS+ L E+    ++AGYVPD +  L D+DE++K+Y L 
Sbjct: 1595 VKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLW 1654

Query: 775  HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
            +HSE+LA+AFGLI+T ++  +R+ KNLR+C DCHS  K VS +  R+I++RD  RFH F 
Sbjct: 1655 NHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFS 1714

Query: 835  QGSCSCSDFW 844
             G CSC D+W
Sbjct: 1715 GGKCSCGDYW 1724



 Score =  308 bits (789), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 175/578 (30%), Positives = 296/578 (51%), Gaps = 32/578 (5%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C    A  +G  +H  ++  GF  D+ +   LI FY + GD++  R VFD M ER+
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSWT+++   ++    ++A  LF +M   G+K N  T    + AC  L+ L++G +V  
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
            I +     N  + +ALVD + KCG ++ A  LFG   +R++V  N ++  Y   G A +
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           +  +   ML  G  PD  T+ S + ASA+ G L+     HG + + G   +D +   +I+
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 275

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
            Y                                KNG + SA+++   M  +D  S   +
Sbjct: 276 AYA-------------------------------KNGSLRSAKDLRKGMLKKDLFSSTAL 304

Query: 444 LGGLTQENMFE-EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           + G   E ++  +A++LF+ M    I +D V +  + + C  L +  L   I+A+  K  
Sbjct: 305 ITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQ 364

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
              D+ +  AL+DM+A+ G+ + A + F  ME+++V +WT+ I   A  G G  AV L+ 
Sbjct: 365 PSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYK 424

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           +M  +G KP+ + F+ +L ACSH GL  +G   F +M + + + P+  HY CMVDL  R 
Sbjct: 425 KMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQ 484

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           GLL EA +L+  + ++ N  +WG++L A   +  + +   AA  +  + PE S  +V+L+
Sbjct: 485 GLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLA 544

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
           +IY++AG W +  ++R  M+E+  +K  G S  +   K
Sbjct: 545 SIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 582



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 255/506 (50%), Gaps = 37/506 (7%)

Query: 80   FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
            F ++ +A+  FD     NE S     +++++ GY  +GL  EA+ L+ ++ G G+ P+ F
Sbjct: 792  FGNIEHARYVFDEMRHRNEAS-----WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGF 846

Query: 140  TFPFVLNACTKSSAFG-EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
                ++ AC++S     EG QVHG +VK G   DV+V   L++FYG  G + + +++F+E
Sbjct: 847  MVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEE 906

Query: 199  MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
            M + NVVSWTSL+   +    P E + ++  M +EG+  N  T   V S+C  L++  LG
Sbjct: 907  MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 966

Query: 259  DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             +V  +I + G + +  + N+L+ M+    +V+ A  +F    + +++  N ++S Y   
Sbjct: 967  YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 1026

Query: 319  GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
            GL RE+L     M       +  T+ S +S  + + +L  GR  HG V++ GL+    IC
Sbjct: 1027 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 1086

Query: 379  NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
            NT++ +Y + G+ E A  +F  M+ + ++SWNS++A  +++G      ++ +E+      
Sbjct: 1087 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL------ 1140

Query: 439  SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                              +++ +VM       + VT     +AC     L  +K ++A I
Sbjct: 1141 ------------------LQMGKVM-------NHVTFASALAACSNPECLIESKIVHALI 1175

Query: 499  EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
               G H  + +  ALV M+ + G    A +V + M + D   W A IG  A      +AV
Sbjct: 1176 IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAV 1235

Query: 559  ELFNEMLRQGIKPDSIVFVGVLTACS 584
            + +  +  +GI  + I  V VL ACS
Sbjct: 1236 KAYKLIREKGIPANYITMVSVLGACS 1261



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 269/582 (46%), Gaps = 41/582 (7%)

Query: 90   FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI-LPDKFTFPFVLNAC 148
            F   +KD++   +    N+  R + C+   +  + L  +   +GI   +   FP  L   
Sbjct: 701  FAEQVKDDDLKTS----NAGSRRWGCLDGDIAKVFLQQQHTDYGIRCLNAVNFP--LKGF 754

Query: 149  TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
            ++ ++   G  +H   +    +  +F  N LIN Y + G+I   R VFDEM  RN  SW+
Sbjct: 755  SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814

Query: 209  SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL-ELGDRVCAYIDE 267
            +++    R  L +EAV LF +M   G++PN   +  +I+AC++   + + G +V  ++ +
Sbjct: 815  TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 874

Query: 268  LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
             G+  +  +  ALV  Y   G V  A++LF E  D N+V   ++M  Y   G   E L +
Sbjct: 875  TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 934

Query: 328  LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
               M   G   ++ T  +  S+   L D + G    G++++ G E   S+ N++I M+  
Sbjct: 935  YQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 994

Query: 388  CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
                E AC +FDHM+   ++SWN++I+    +G                           
Sbjct: 995  FSSVEEACYVFDHMNECDIISWNAMISAYAHHG--------------------------- 1027

Query: 448  TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
                +  E++  F  M     + +  T+  + S C  +  L   + I+  + K G+  ++
Sbjct: 1028 ----LCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNV 1083

Query: 508  QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
             +   L+ +++  G  + A  VF+ M +RD+ +W + +     +G     +++  E+L+ 
Sbjct: 1084 CICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQM 1143

Query: 568  GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
            G   + + F   L ACS+   + +   +  ++  + G    ++    +V + G+ G++ E
Sbjct: 1144 GKVMNHVTFASALAACSNPECLIES-KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMME 1202

Query: 628  ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            A  ++++MP +P+ V W +L+    +++  + A  A + I E
Sbjct: 1203 AKKVLQTMP-QPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/558 (25%), Positives = 260/558 (46%), Gaps = 53/558 (9%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H H++  G G      +K++    ++G    +  A+  FD          ++  + +++ 
Sbjct: 53  HTHLITNGFGSDLHLNTKLIIFYVKVG---DVIAARNVFD-----GMPERSVVSWTAMVS 104

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
           GYS  G   +A  L+ ++   G+  ++FT+   L ACT       G+QV G I K  F  
Sbjct: 105 GYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVE 164

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           ++FV++ L++F+ +CG + D   +F  M ER+VVSW ++I   A +    ++  +F  M+
Sbjct: 165 NLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML 224

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
             G+ P+  T+  V+ A A+   L + +++   I +LG  +  ++   L++ Y K G++ 
Sbjct: 225 RGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLR 284

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGL-AREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           +AK L      ++L     +++ Y   G+ + +AL +  EM       D V + S ++  
Sbjct: 285 SAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNIC 344

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           A L     G   H + L+       ++ N +IDMY K G+ E A R FD M  K V+SW 
Sbjct: 345 ANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWT 404

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           SLI+G  K+G        +  M                       A+ L++ M S+  K 
Sbjct: 405 SLISGYAKHG--------YGHM-----------------------AVSLYKKMESKGFKP 433

Query: 471 DRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           + VT + +  AC + G   +  +     + K  I    +  + +VD+FAR G  + A  +
Sbjct: 434 NDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNL 493

Query: 530 FRRME-KRDVSAWTAAIGAMAMEG----NGEQAVELFNEMLRQGIKPD-SIVFVGVLTAC 583
             +++ K + S W A +GA ++ G      E A  LFN      ++P+ S+ +V + +  
Sbjct: 494 LCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFN------MQPENSVNYVVLASIY 547

Query: 584 SHGGLVNQGWHLFRSMTD 601
           S  GL +  W + + M +
Sbjct: 548 SAAGLWDDAWKIRKLMEE 565



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 38/300 (12%)

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           E  +++ S   ++D    + +   C    A      I+ ++  NG   D+ L T L+  +
Sbjct: 16  EALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFY 75

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            + GD   A  VF  M +R V +WTA +   +  G  E+A  LF++M   G+K +   + 
Sbjct: 76  VKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYG 135

Query: 578 GVLTACSH----------GGLVNQGW---HLF--RSMTDIHG---------------VSP 607
             L AC+            G + +G    +LF   ++ D H                +  
Sbjct: 136 SALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMER 195

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
            +V +  M+      G   ++  + +SM    + P+    GS+L A  +   + IA    
Sbjct: 196 DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIH 255

Query: 665 ERITELDPEKSGVHV-LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
             IT+L      +   LL N YA  G   +   +R  M    ++K   SS+  + G  HE
Sbjct: 256 GIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM----LKKDLFSSTALITGYAHE 311


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/668 (36%), Positives = 371/668 (55%), Gaps = 40/668 (5%)

Query: 122 AISLYVELAG-FGILPDKFTFPFVLNACTKSSAFGEGVQ-VHGAIVKMGFDRDVFVENCL 179
           A  ++++LAG          F  +L++C K       V+ VH +++K GF  +VF++N L
Sbjct: 2   ARKIFLKLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRL 61

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-----------RDLPK------- 221
           I+ Y +CG + DGR++FD+M +RNV +W S++    +           R +P+       
Sbjct: 62  IDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121

Query: 222 -------------EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
                        EA+Y F  M +EG   N  T    +SAC+ L ++  G ++ + I + 
Sbjct: 122 SMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKS 181

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
              ++  + +ALVDMY KCG V+ A+Q+F E  DRN+V  N++++ Y + G A EAL + 
Sbjct: 182 PCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVF 241

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMK 387
             ML     PD VT+ S +SA A L  +  G+  H  V++ + L     + N  +DMY K
Sbjct: 242 QVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAK 301

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           C + + A  IFD M  + V++  S+++G       ++AR +F++M  R+ +SWN ++ G 
Sbjct: 302 CSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-- 505
           TQ    EEA+ LF ++  E +     T   +  AC  L  L L    + ++ K+G     
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQS 421

Query: 506 ----DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
               D+ +  +L+DM+ +CG  +    VFR+M +RD  +W A I   A  G G +A+ELF
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
            EML  G KPD I  +GVL+AC H G V +G H F SMT   GV+P   HY CMVDLLGR
Sbjct: 482 REMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG L EA  +I+ MPV+P+ VIWGSLLAAC+ H+N+ +  Y AE++ E++   SG +VLL
Sbjct: 542 AGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLL 601

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SN+YA  GKW +   VR  M+++G+ K PG S I++ G  H F   D+SHP    I S+L
Sbjct: 602 SNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLL 661

Query: 742 REMNCRLR 749
             +   +R
Sbjct: 662 DILIAEMR 669



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/597 (26%), Positives = 271/597 (45%), Gaps = 116/597 (19%)

Query: 33  SPSIGSLKNCKTLN----ELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQK 88
           SP    L +C  L     +++  H  ++K G  ++    ++++   A+ G+ E     ++
Sbjct: 20  SPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLED---GRQ 76

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL------------AGF---- 132
            FD   + N     +F +NS++ G + +G   EA SL+  +            +GF    
Sbjct: 77  LFDKMPQRN-----VFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHD 131

Query: 133 ---------------GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
                          G + +++TF   L+AC+  +    GVQ+H  I K     DV++ +
Sbjct: 132 RCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGS 191

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK-EAVYLFFEMVEEGIK 236
            L++ Y +CG++ D ++VFDEM +RNVVSW SLI  C  ++ P  EA+ +F  M+E  ++
Sbjct: 192 ALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLI-TCYEQNGPAVEALKVFQVMLESWVE 250

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNALVDMYMKC-------- 287
           P+ VT+  VISACA L  +++G  V A + ++  ++ + ++ NA VDMY KC        
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310

Query: 288 -----------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
                                   +   A+ +F +  +RN+V  N +++ Y + G   EA
Sbjct: 311 IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS------IC 378
           L++   +      P   T  + + A A L DL  G   H +VL++G +          + 
Sbjct: 371 LSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N++IDMY+KCG  E    +F  M  +  VSWN++I G  +NG    A E+F E       
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE------- 483

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                                   ML    K D +TM+GV SACG+ G ++  +  ++ +
Sbjct: 484 ------------------------MLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519

Query: 499 EKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            ++ G+       T +VD+  R G  + A  +   M  + D   W + + A  +  N
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRN 576


>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
 gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 609

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/613 (37%), Positives = 357/613 (58%), Gaps = 23/613 (3%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA-VDTAKQLFGECKDR 303
           ++S+C   + ++   +V A +   G+  + +  N L+       A +  A  +F      
Sbjct: 7   LLSSCKSFRQIK---QVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQP 63

Query: 304 NLVLCNTIMSNYVRLGLAREALA---------ILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           +L L NTI+     L  +  + A         I +E L+    P++ +   A        
Sbjct: 64  DLFLYNTIIK---VLAFSTTSSADSFTKFRSLIREERLV----PNQYSFAFAFKGCGSGV 116

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            +L G     + ++ GLE    + N +I MY+       A ++FD   N+ + SWN +++
Sbjct: 117 GVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLS 176

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G  + G ++ AR++F EMP +D +SW TM+ G  Q   F EA+++F  ML++ +  +  T
Sbjct: 177 GYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYT 236

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +    +AC  L ALD  +W++ YI+KN I  + +L   L+DM+A+CG+ + A ++F    
Sbjct: 237 LASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNP 296

Query: 535 --KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
             KR V  W A IG  A+ G  ++A+E+F +M  + + P+ + FV +L ACSHG  V +G
Sbjct: 297 RLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEG 356

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
            + F SM   + V P++ HYGC+VDLLGRAG L EA ++I SM + P+  IWG+LL+AC+
Sbjct: 357 RYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACK 416

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H++ ++     + + ELDP   G HVLL+NIY+  G W     +R ++ E G +K PG 
Sbjct: 417 IHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGC 476

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE-KKY 771
           SSIE+NG  H+F  GD SHP+   +   L EM  +L+ AGY+P+   VLLD+D+ E ++ 
Sbjct: 477 SSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRET 536

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
            L  HSEKLA+AFGL++T+   PIR+VKNLR+C DCH   K +SKVYDREIIVRD  R+H
Sbjct: 537 ALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYH 596

Query: 832 FFRQGSCSCSDFW 844
            F+ G+CSC+D+W
Sbjct: 597 HFKDGTCSCNDYW 609



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 199/431 (46%), Gaps = 52/431 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L +CK+  ++KQ H  ++  GL   P   +K++   + +  F  ++YA   FD++ + + 
Sbjct: 8   LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSI--FAPISYAHMVFDHFPQPD- 64

Query: 99  TSATLFMYNSLIR--GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
               LF+YN++I+   +S              +    ++P++++F F    C       E
Sbjct: 65  ----LFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLE 120

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD------------------- 197
           G QV    +K+G + ++FV N LI  Y     +VD R+VFD                   
Sbjct: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180

Query: 198 ------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
                       EM E++VVSWT++I  C +     EA+ +F  M+ +G+ PN  T+   
Sbjct: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASS 240

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK--DR 303
           ++ACA L  L+ G  +  YI +  ++ N  ++  L+DMY KCG ++ A +LF       R
Sbjct: 241 LAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKR 300

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR--- 360
            +   N ++  +   G ++EA+ + ++M +    P++VT ++ ++A +    +  GR   
Sbjct: 301 KVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYF 360

Query: 361 --MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLI 417
             M   Y ++  LE +      ++D+  + G+ + A  I   M     V  W +L++   
Sbjct: 361 ESMASHYRVKPELEHY----GCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACK 416

Query: 418 KNGDVESAREV 428
            + D E    V
Sbjct: 417 IHKDAEMGERV 427


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/679 (35%), Positives = 371/679 (54%), Gaps = 91/679 (13%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  I+K G     F  + LI F      G++     +F+ + + N   W ++I   + 
Sbjct: 50  QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSL 109

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
              P  A+  +  M+  G++PNS T   ++ +CAK+   + G ++  ++ +LG++++  +
Sbjct: 110 SSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFV 169

Query: 277 VNALVDMYMKCGAV-------------------------------DTAKQLFGECKDRNL 305
             +L++MY + G +                               D A++LF E   R+ 
Sbjct: 170 HTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDA 229

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  N +++ Y + G   EALA   EM      P+  TM++ +SA AQ G L  G     +
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +  +GL     + N +IDMY KCG                               D++ A
Sbjct: 290 IEDHGLGSNLRLVNALIDMYSKCG-------------------------------DLDKA 318

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
           R++F  +  +D ISWN M+GG +  N ++EA+ LFR M    ++ + VT V +  AC YL
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYL 378

Query: 486 GALDLAKWIYAYIEKNGIH-CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           GALDL KWI+AYI+K  +   +  L T+L+DM+A+CG+ + A QVF  M+ + + +W A 
Sbjct: 379 GALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAM 438

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I  +AM G+   A+ELF +M  +G +PD I FVGVL+ACSH GLV  G   F SM + + 
Sbjct: 439 ISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYD 498

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           +SP++ HYGCM+DLLGRAGL  EA  L+K+M ++P+  IWGSLL AC+ H NV++  +AA
Sbjct: 499 ISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAA 558

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           + + EL+PE  G +VLLSNIYA+AG+W +VAR+R ++ ++G++K                
Sbjct: 559 KHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK---------------- 602

Query: 725 TSGDESHPEMNNISSMLREMNCRLRD-AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
                      +I  ML E++    +  G VPD + VL D+DE+ K+  LSHHSEKLA+A
Sbjct: 603 ---------XQDIYKMLDEIDQSFGERPGXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIA 653

Query: 784 FGLISTSKTMPIRVVKNLR 802
           FGLIST     IR+VKNLR
Sbjct: 654 FGLISTKPETTIRIVKNLR 672



 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 191/590 (32%), Positives = 298/590 (50%), Gaps = 73/590 (12%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           MAL      LV+  PT+             ++ PS+  L  CK+   LKQ H  I+K GL
Sbjct: 1   MALASFSPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGL 60

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
            +    +SK++  CA +  F +L+YA   F+   + N+     F++N++IRG S     V
Sbjct: 61  HNTQFALSKLIEFCA-ISPFGNLSYALLLFESIEQPNQ-----FIWNTMIRGNSLSSSPV 114

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
            AI  YV +   G+ P+ +TFPF+L +C K  A  EG Q+HG ++K+G + D FV   LI
Sbjct: 115 GAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLI 174

Query: 181 NFYGECGDIV-------------------------------DGRRVFDEMSERNVVSWTS 209
           N Y + G++                                D RR+F+E+  R+ VSW +
Sbjct: 175 NMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNA 234

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I   A+    +EA+  F EM    + PN  TMV V+SACA+  +LELG+ V ++I++ G
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHG 294

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           + +N  +VNAL+DMY KCG +D A+ LF    +++++  N ++  Y  +   +EALA+  
Sbjct: 295 LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFR 354

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMK 387
           +M      P+ VT +S + A A LG L  G+  H Y+ +   GL    S+  ++IDMY K
Sbjct: 355 KMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN-TSLWTSLIDMYAK 413

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  E A ++F  M  K++ SWN++I+GL  +G                           
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHG--------------------------- 446

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCD 506
              NM   A+ELFR M  E  + D +T VGV SAC + G ++L +  + + +E   I   
Sbjct: 447 -HANM---ALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPK 502

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +Q    ++D+  R G    A  + + ME K D + W + +GA  + GN E
Sbjct: 503 LQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/715 (34%), Positives = 385/715 (53%), Gaps = 41/715 (5%)

Query: 133  GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCLINFYGECGDIVD 191
            GI P+K +F  +LNAC+ S A   G ++H  I+    D  +  V   L++ YG+CG I +
Sbjct: 432  GIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAE 491

Query: 192  GRRVFDEMS--ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
               VF EM    R++V+W  ++ A A+ D  KEA     EM++ G+ P++++   V+S+C
Sbjct: 492  AELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551

Query: 250  AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
               Q  ++  R+C  I E G + +A +  AL+ M+ +C  ++ A+ +F E    ++V   
Sbjct: 552  YCSQEAQV-LRMC--ILESGYR-SACLETALISMHGRCRELEQARSVFDEMDHGDVVSWT 607

Query: 310  TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
             ++S        +E   +   M L G  PD+ T+ + +        L  G++ H  V   
Sbjct: 608  AMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEI 667

Query: 370  GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            GLE   ++ N +++MY  CG                               D   A   F
Sbjct: 668  GLEADIAVENALLNMYSNCG-------------------------------DWREALSFF 696

Query: 430  SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
              M  RD +SWN M     Q  + +EA+ LFR M  E +K D++T     +  G    + 
Sbjct: 697  ETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVS 756

Query: 490  LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
              K  +    ++G+  D+ +AT LV ++A+CG    A+ +FR   +  V    A IGA+A
Sbjct: 757  DGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALA 816

Query: 550  MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
              G  E+AV++F +M ++G++PD    V +++AC H G+V +G   F +M +  G+SP +
Sbjct: 817  QHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTL 876

Query: 610  VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
             HY C VDLLGRAG L  A  +I+ MP E N ++W SLL  C+   + ++    A+RI E
Sbjct: 877  EHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILE 936

Query: 670  LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
            LDP  S  HV+LSNIY + GKW +    R ++ +Q ++  PG S +E+  +VHEF +GD 
Sbjct: 937  LDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDR 996

Query: 730  SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
            SHP+ + I  +L ++   +R AGY  D     LD +++ K+  L +HSE++A+AFGLI+T
Sbjct: 997  SHPQTDEIYVVLDKLELLMRRAGYEADKG---LDAEDELKEKALGYHSERIAIAFGLIAT 1053

Query: 790  SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
                 +++VKNLR+C DCH+  K +S +  REIIVRD+ RFH F  G+CSC D W
Sbjct: 1054 PPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 169/628 (26%), Positives = 287/628 (45%), Gaps = 55/628 (8%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I +L  C +L +    H  + + GLG  P   + ++    + G +E    A   F     
Sbjct: 237 ITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEG---AYGVFKAMAS 293

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA-F 154
             E    L  +N++I      G   +A++++  L   G+ P+  T   +LNA   S   F
Sbjct: 294 RQELD--LVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDF 351

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICA 213
           G   + HG I + G+ RDV V N +I+ Y +CG       VF  +  + +V+SW +++ A
Sbjct: 352 GAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
              R    + V  F  M+  GI PN V+ + +++AC+  + L+ G ++ + I  L  + +
Sbjct: 412 SEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLI--LTRRRD 469

Query: 274 AL---MVNALVDMYMKCGAVDTAKQLFGE--CKDRNLVLCNTIMSNYVRLGLAREALAIL 328
            +   +   LV MY KCG++  A+ +F E     R+LV  N ++  Y +   ++EA   L
Sbjct: 470 YVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGAL 529

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC--NTMIDMYM 386
            EML  G  PD ++  S +S+     +    RMC   +L +   G+ S C    +I M+ 
Sbjct: 530 MEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMC---ILES---GYRSACLETALISMHG 583

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           +C + E A  +FD M +  VVSW ++++   +N D                         
Sbjct: 584 RCRELEQARSVFDEMDHGDVVSWTAMVSATAENRD------------------------- 618

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                 F+E   LFR M  E +  D+ T+      C     L L K I+A + + G+  D
Sbjct: 619 ------FKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEAD 672

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + +  AL++M++ CGD + A+  F  M+ RD+ +W     A A  G  ++AV LF  M  
Sbjct: 673 IAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQL 732

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
           +G+KPD + F   L       LV+ G  LF  +    G+   +     +V L  + G L 
Sbjct: 733 EGVKPDKLTFSTTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLD 791

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKH 654
           EA+ L +    +   V+  +++ A  +H
Sbjct: 792 EAISLFRG-ACQWTVVLLNAIIGALAQH 818



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 169/612 (27%), Positives = 293/612 (47%), Gaps = 55/612 (8%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L +C  S+   +G + H  I   G ++ +F+ NCLIN Y  CG + +   +F +M 
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGD 259
           ERNVVSWT+LI A A+      A  LF  M +E    PNS T+V +++ACA  ++L +G 
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 260 RVCAYIDELGMKANA----LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
            + A I ELG++  +    L+ NA+++MY KCG+ + A  +F    ++++V    +   Y
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 316 VR-LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
            +      +AL I  EMLL    P+ +T ++A+ A   L D   G   H  +   GL G+
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAGL-GF 263

Query: 375 DSIC-NTMIDMYMKCGKQEMACRIFDHMSNKT---VVSWNSLIAGLIKNGDVESAREVFS 430
           D +  N +I+MY KCG  E A  +F  M+++    +VSWN++I     +  VE+ R    
Sbjct: 264 DPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMI-----SASVEAGRH--- 315

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA-LD 489
                                   +AM +FR +  E ++ + VT++ + +A    G    
Sbjct: 316 -----------------------GDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG 352

Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAM 548
            A+  +  I ++G   D+ +  A++ M+A+CG    A  VFRR+  K DV +W   +GA 
Sbjct: 353 AARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGAS 412

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
               +  + V  F+ ML  GI P+ + F+ +L ACS+   ++ G  +   +        +
Sbjct: 413 EDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAERI 667
                 +V + G+ G + EA  + K MP+    ++ W  +L A  ++     A  A   +
Sbjct: 473 SSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532

Query: 668 TE--LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS-IEVNGKVHEF 724
            +  + P+      +LS+ Y S         +R+ + E G R     ++ I ++G+  E 
Sbjct: 533 LQGGVLPDALSFTSVLSSCYCS----QEAQVLRMCILESGYRSACLETALISMHGRCREL 588

Query: 725 TSGDESHPEMNN 736
                   EM++
Sbjct: 589 EQARSVFDEMDH 600



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 264/599 (44%), Gaps = 77/599 (12%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD----VFVENCLINFYGECGDIVD 191
           P+ +T   +LNAC  S     G  +H  I ++G +R+      V N +IN Y +CG   D
Sbjct: 125 PNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPED 184

Query: 192 GRRVFDEMSERNVVSWTSLICACA--RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
              VF  + E++VVSWT++  A A  RR  P +A+ +F EM+ + + PN +T +  + AC
Sbjct: 185 AIAVFLTIPEKDVVSWTAMAGAYAQERRFYP-DALRIFREMLLQPLAPNVITFITALGAC 243

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR---NLV 306
             L++   G  + + + E G+  + L  NAL++MY KCG  + A  +F     R   +LV
Sbjct: 244 TSLRD---GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLV 300

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG-DLLCGRMCHGY 365
             N ++S  V  G   +A+AI   + L G RP+ VT+++ ++A A  G D    R  HG 
Sbjct: 301 SWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGR 360

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +  +G      + N +I MY KCG    A  +F  +  K                     
Sbjct: 361 IWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKC-------------------- 400

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                     D ISWNTMLG       F + +  F  ML   I  ++V+ + + +AC   
Sbjct: 401 ----------DVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNS 450

Query: 486 GALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM--EKRDVSAWT 542
            ALD  + I++ I  +   + +  +AT LV M+ +CG    A  VF+ M    R +  W 
Sbjct: 451 EALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWN 510

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG--------LVNQGWH 594
             +GA A     ++A     EML+ G+ PD++ F  VL++C            ++  G+ 
Sbjct: 511 VMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYR 570

Query: 595 ---LFRSMTDIHGVSPQ---------------IVHYGCMVDLLGRAGLLGEALDLIKSMP 636
              L  ++  +HG   +               +V +  MV          E   L + M 
Sbjct: 571 SACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQ 630

Query: 637 VE---PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS-GVHVLLSNIYASAGKW 691
           +E   P+     + L  C     + +       +TE+  E    V   L N+Y++ G W
Sbjct: 631 LEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDW 689



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 225/458 (49%), Gaps = 37/458 (8%)

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           S +L  +N ++  Y+      EA    +E+   G+LPD  +F  VL++C  S    E   
Sbjct: 503 SRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ---EAQV 559

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +   I++ G+ R   +E  LI+ +G C ++   R VFDEM   +VVSWT+++ A A    
Sbjct: 560 LRMCILESGY-RSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRD 618

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            KE  +LF  M  EG+ P+  T+   +  C     L LG  + A + E+G++A+  + NA
Sbjct: 619 FKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENA 678

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L++MY  CG    A   F   K R+LV  N + + Y + GLA+EA+ +   M L G +PD
Sbjct: 679 LLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPD 738

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           ++T  + ++ S     +  G++ HG    +GL+   S+   ++ +Y KCGK + A  +F 
Sbjct: 739 KLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFR 798

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                TVV  N++I  L ++G        FS                       EEA+++
Sbjct: 799 GACQWTVVLLNAIIGALAQHG--------FS-----------------------EEAVKM 827

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFA 518
           F  M  E ++ D  T+V + SACG+ G ++     +  + E  GI   ++     VD+  
Sbjct: 828 FWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLG 887

Query: 519 RCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMAMEGNGE 555
           R G  + A Q+ R+M   D +  WT+ +G   ++G+ E
Sbjct: 888 RAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAE 925



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 22/272 (8%)

Query: 464 LSERIKVDRVT----MVGVASACGYLGALDLAKWIYAY--IEKNGIHCDMQLATALVDMF 517
           LS  ++VDR         +  +C  + + DLAK   A+  I   G+   + L   L++M+
Sbjct: 13  LSGAVRVDRAADLQEYTALLQSC--VDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMY 70

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVF 576
            RCG  + A  +F +ME+R+V +WTA I A A  G   +A  LF  M L     P+S   
Sbjct: 71  VRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTL 130

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDI----HGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
           V +L AC++   +  G  +   + ++       +  +V    M+++  + G   +A+ + 
Sbjct: 131 VAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVG-NAMINMYAKCGSPEDAIAVF 189

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA---- 688
            ++P E + V W ++  A  + +     A    R   L P    V   ++ + A      
Sbjct: 190 LTIP-EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD 248

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
           G W +     L     G   L G++ I + GK
Sbjct: 249 GTWLHSL---LHEAGLGFDPLAGNALINMYGK 277


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/748 (33%), Positives = 384/748 (51%), Gaps = 67/748 (8%)

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           L  F   P  F    +L A  KS       +V   +     D ++F  N L++       
Sbjct: 39  LKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRL 94

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVIS 247
           + D  R+F  M ER+ VS+ +LI   +    P  +V L+  ++ EE ++P  +T+  +I 
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
             + L +  LG  V   +  LG  A A + + LVDMY K G +  A+++F E + + +V+
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 308 CNTIMSNYVRL-------------------------------GLAREALAILDEMLLHGP 336
            NT+++  +R                                GL  EAL +   M   G 
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
             D+ T  S ++A   L  L  G+  H Y+ R   E    + + ++DMY KC        
Sbjct: 275 GIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS------ 328

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    +  A  VF  M  R+ ISW  M+ G  Q    EEA
Sbjct: 329 -------------------------IRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEA 363

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +  F  M  + IK D  T+  V S+C  L +L+     +     +G+   + ++ ALV +
Sbjct: 364 VRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTL 423

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CG  + A ++F  M   D  +WTA +   A  G  ++ ++LF +ML  G+KPD + F
Sbjct: 424 YGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTF 483

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVL+ACS  GLV +G   F SM   HG+ P   HY CM+DL  R+G   EA + IK MP
Sbjct: 484 IGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
             P+   W +LL++C+   N++I  +AAE + E DP+    +VLL +++A+ G+WT VA 
Sbjct: 544 HSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAH 603

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R  M+++ ++K PG S I+   KVH F++ D+SHP  + I   L  +N ++ + GY PD
Sbjct: 604 LRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPD 663

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           +++VL DV + +K +++SHHSEKLA+AFGLI   + MPIR+VKNLR+C DCH+  K +SK
Sbjct: 664 VSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISK 723

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  R+I+VRD  RFH F  G+CSC DFW
Sbjct: 724 ITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 236/533 (44%), Gaps = 72/533 (13%)

Query: 106 YNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           YN+LI G+S  G    ++ LY   L    + P + T   ++   +  S    G  VH  +
Sbjct: 113 YNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQV 172

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS------------------------ 200
           +++GF    FV + L++ Y + G I D RRVF EM                         
Sbjct: 173 LRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAK 232

Query: 201 -------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
                  +R+ ++WT+++    +  L  EA+ +F  M  EG+  +  T   +++AC  L 
Sbjct: 233 GLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALA 292

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            LE G ++ AYI     + N  + +ALVDMY KC ++  A+ +F     RN++    ++ 
Sbjct: 293 ALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIV 352

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y +   + EA+    EM + G +PD  T+ S +S+ A L  L  G   H   L +GL  
Sbjct: 353 GYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMR 412

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
           + ++ N ++ +Y KCG  E A R+FD MS    VSW +L+ G  + G             
Sbjct: 413 YITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA----------- 461

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                               +E ++LF  ML+  +K D VT +GV SAC   G ++    
Sbjct: 462 --------------------KETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCD 501

Query: 494 IYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAME 551
            +  ++K+ GI       T ++D+++R G  + A +  ++M    D   W   + +  + 
Sbjct: 502 YFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLR 561

Query: 552 GN---GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           GN   G+ A E   E   Q   P S V +  + A    G   +  HL R M D
Sbjct: 562 GNMEIGKWAAENLLETDPQ--NPASYVLLCSMHAAK--GQWTEVAHLRRGMRD 610



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 211/456 (46%), Gaps = 48/456 (10%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           HC +L+ G G      S +V   A+MG       A++ F         + T+ MYN+LI 
Sbjct: 169 HCQVLRLGFGAYAFVGSPLVDMYAKMGLIRD---ARRVFQ-----EMEAKTVVMYNTLIT 220

Query: 112 GY-------------------------------SCIGLGVEAISLYVELAGFGILPDKFT 140
           G                                +  GL +EA+ ++  +   G+  D++T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  +L AC   +A  EG Q+H  I +  ++ +VFV + L++ Y +C  I     VF  M+
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            RN++SWT++I    +    +EAV  F EM  +GIKP+  T+  VIS+CA L +LE G +
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
                   G+     + NALV +Y KCG+++ A +LF E    + V    +++ Y + G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY---VLRNGLEGWDSI 377
           A+E + + ++ML +G +PD VT +  +SA ++ G  L  + C  +      +G+   D  
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG--LVEKGCDYFDSMQKDHGIVPIDDH 518

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDVES---AREVFSEMP 433
              MID+Y + G+ + A      M +      W +L++     G++E    A E   E  
Sbjct: 519 YTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETD 578

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            ++  S+  +      +  + E   L R M   ++K
Sbjct: 579 PQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVK 614



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 140/311 (45%), Gaps = 10/311 (3%)

Query: 363 HGYVLRNGLEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
           H  +L+  L+   + + N ++  Y K G+   A R+FD M +  + + N+L++ L  +  
Sbjct: 35  HCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRL 94

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVAS 480
           V     +F+ MP RD +S+N ++ G +       +++L+R +L E  ++  R+T+  +  
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
               L    L   ++  + + G      + + LVDM+A+ G  + A +VF+ ME + V  
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           +   I  +      E A  LF  M    +  DSI +  ++T  +  GL  +   +FR M 
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLM----VDRDSITWTTMVTGLTQNGLQLEALDVFRRMR 270

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDL---IKSMPVEPNDVIWGSLLAACQKHQNV 657
              GV      +G ++   G    L E   +   I     E N  +  +L+    K +++
Sbjct: 271 -AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSI 329

Query: 658 DIAAYAAERIT 668
            +A     R+T
Sbjct: 330 RLAEAVFRRMT 340


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/797 (31%), Positives = 410/797 (51%), Gaps = 40/797 (5%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q    ++K GL  K +  + ++     MG  +   YA      YI D  +      +NS
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVD---YAN-----YIFDQMSERDTISWNS 231

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +   Y+  G   E+  ++  +  F    +  T   +L+          G  +HG +VKMG
Sbjct: 232 IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 291

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           FD  V V N L+  Y   G  V+   VF +M  ++++SW SL+ +        +A+ L  
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 351

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M+  G   N VT    ++AC      E G  +   +   G+  N ++ NALV MY K G
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 411

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +  ++++  +   R++V  N ++  Y       +ALA    M + G   + +T++S +S
Sbjct: 412 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471

Query: 349 ASAQLGDLL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           A    GDLL  G+  H Y++  G E  + + N++I MY KCG                  
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG------------------ 513

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                        D+ S++++F+ +  R+ I+WN ML         EE ++L   M S  
Sbjct: 514 -------------DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           + +D+ +     SA   L  L+  + ++    K G   D  +  A  DM+++CG+    +
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 620

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           ++      R + +W   I A+   G  E+    F+EML  GIKP  + FV +LTACSHGG
Sbjct: 621 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 680

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV++G   +  +    G+ P I H  C++DLLGR+G L EA   I  MP++PND++W SL
Sbjct: 681 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 740

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           LA+C+ H N+D    AAE +++L+PE   V+VL SN++A+ G+W +V  VR QM  + I+
Sbjct: 741 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 800

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K    S +++  KV  F  GD +HP+   I + L ++   ++++GYV D +  L D DE+
Sbjct: 801 KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEE 860

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           +K++ L +HSE+LA+A+ L+ST +   +R+ KNLR+C DCHS  K VS+V  R I++RD 
Sbjct: 861 QKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQ 920

Query: 828 NRFHFFRQGSCSCSDFW 844
            RFH F +G CSC D+W
Sbjct: 921 YRFHHFERGLCSCKDYW 937



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 276/577 (47%), Gaps = 40/577 (6%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  +  A+  FD     NE S     +N+++ G   +GL +E +  + ++   GI P  F
Sbjct: 5   FGRVKPARHLFDIMPVRNEVS-----WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 59

Query: 140 TFPFVLNACTKS-SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
               ++ AC +S S F EGVQVHG + K G   DV+V   +++ YG  G +   R+VF+E
Sbjct: 60  VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M +RNVVSWTSL+   + +  P+E + ++  M  EG+  N  +M  VIS+C  L++  LG
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            ++   + + G+++   + N+L+ M    G VD A  +F +  +R+ +  N+I + Y + 
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G   E+  I   M       +  T+ + +S    +     GR  HG V++ G +    +C
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           NT++ MY   G+   A  +F  M  K ++SWNSL+A  + +G     R +          
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG-----RSL---------- 344

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                           +A+ L   M+S    V+ VT     +AC      +  + ++  +
Sbjct: 345 ----------------DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
             +G+  +  +  ALV M+ + G+   + +V  +M +RDV AW A IG  A + + ++A+
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 448

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTAC-SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
             F  M  +G+  + I  V VL+AC   G L+ +G  L   +      S + V    ++ 
Sbjct: 449 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK-NSLIT 507

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +  + G L  + DL   +    N + W ++LAA   H
Sbjct: 508 MYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 543



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 288/611 (47%), Gaps = 52/611 (8%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQM---GTFESLTYAQKAFDYYIKDNETSATLFMY 106
           Q H  + K GL      +S V  + A +   G +  ++ ++K F+     N  S T    
Sbjct: 80  QVHGFVAKSGL------LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT---- 129

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
            SL+ GYS  G   E I +Y  + G G+  ++ +   V+++C        G Q+ G +VK
Sbjct: 130 -SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVK 188

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G +  + VEN LI+  G  G++     +FD+MSER+ +SW S+  A A+    +E+  +
Sbjct: 189 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 248

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F  M     + NS T+  ++S    + + + G  +   + ++G  +   + N L+ MY  
Sbjct: 249 FSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 308

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
            G    A  +F +   ++L+  N++M+++V  G + +AL +L  M+  G   + VT  SA
Sbjct: 309 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 368

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           ++A         GR+ HG V+ +GL     I N ++ MY K G                 
Sbjct: 369 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG----------------- 411

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                         ++  +R V  +MP RD ++WN ++GG  ++   ++A+  F+ M  E
Sbjct: 412 --------------EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 457

Query: 467 RIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
            +  + +T+V V SAC   G  L+  K ++AYI   G   D  +  +L+ M+A+CGD   
Sbjct: 458 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           +  +F  ++ R++  W A + A A  G+GE+ ++L ++M   G+  D   F   L+A + 
Sbjct: 518 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 577

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-- 643
             ++ +G  L      + G       +    D+  + G +GE   ++K +P   N  +  
Sbjct: 578 LAVLEEGQQLHGLAVKL-GFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPS 633

Query: 644 WGSLLAACQKH 654
           W  L++A  +H
Sbjct: 634 WNILISALGRH 644



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 169/379 (44%), Gaps = 54/379 (14%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K G V  A+ LF     RN V  NT+MS  VR+GL  E +    +M   G +P    
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 343 MLSAVSASAQLGDLLC-GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           + S V+A  + G +   G   HG+V ++GL     +   ++ +Y   G    + ++F+ M
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
            ++ VVSW SL+ G    G+                                EE +++++
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEP-------------------------------EEVIDIYK 149

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M  E +  +  +M  V S+CG L    L + I   + K+G+   + +  +L+ M    G
Sbjct: 150 GMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 209

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           +   A  +F +M +RD  +W +   A A  G+ E++  +F+ M R   + +S     +L+
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG-----CMVDLLGR----AGLLGEALDLI 632
              H  + +Q W        IHG+   +V  G     C+ + L R    AG   EA  + 
Sbjct: 270 VLGH--VDHQKWG-----RGIHGL---VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319

Query: 633 KSMPVEPNDVI-WGSLLAA 650
           K MP +  D+I W SL+A+
Sbjct: 320 KQMPTK--DLISWNSLMAS 336



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 123/242 (50%), Gaps = 3/242 (1%)

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
           K G V+ AR +F  MP R+ +SWNTM+ G+ +  ++ E ME FR M    IK     +  
Sbjct: 4   KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63

Query: 478 VASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
           + +ACG  G++      ++ ++ K+G+  D+ ++TA++ ++   G    + +VF  M  R
Sbjct: 64  LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           +V +WT+ +   + +G  E+ ++++  M  +G+  +      V+++C      + G  + 
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
             +    G+  ++     ++ +LG  G +  A  +   M  E + + W S+ AA  ++ +
Sbjct: 184 GQVVK-SGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGH 241

Query: 657 VD 658
           ++
Sbjct: 242 IE 243


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 267/727 (36%), Positives = 395/727 (54%), Gaps = 42/727 (5%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           LP+++++  ++ A   SS   +   +  ++   GFD   F  N +I  Y     + D R 
Sbjct: 70  LPNEYSWSCIIQAYVSSSRIHDARALFDSMP--GFD--AFTWNIMIAAYARINRLDDARE 125

Query: 195 VFDEM-SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP--NSVTMVCVISACAK 251
           +F  M S R+VVSW  L+   AR D  +EA  LF  M      P  ++VT   V+   A 
Sbjct: 126 LFHGMISGRDVVSWAILVAGYARHDRLEEASALFRRM------PLWDTVTCTSVLQGYAH 179

Query: 252 LQNL----ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
             +L    EL DR+    D      +A   NA++  Y K   VD A+ LF + K RN   
Sbjct: 180 NGHLAEAQELFDRIGGAGDR-----DATACNAMIAAYGKNARVDLAEGLFAQIKLRNAAS 234

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            + ++  Y + G    A    D M    P+ D +   +  +  +  G+L   R    Y+ 
Sbjct: 235 WSLLLLTYAQNGHLDLAKKSFDRM----PQRDSIAFTAMTAVLSDQGELRGAREMLRYLS 290

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN-----GDV 422
              +  W    N +++ Y + G  +   R+F  M ++TV +  +++AG + N     G V
Sbjct: 291 AVDVIAW----NALLEGYSRTGDLDEVRRLFSAMEHRTVAT--TVVAGTLVNLYGKCGRV 344

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           + AR V   MP R  +SW  M+    Q     EA+ LF+ M  E  +   +T++ V  +C
Sbjct: 345 DDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSC 404

Query: 483 GYLGALDLAKWIYAYIEKNGIHCD-MQLATALVDMFARCGDPQRAMQVFRR--MEKRDVS 539
             LG L L K I+A I  + +    + L  A++ M+ +CG+ + A +VF    +  R V 
Sbjct: 405 AVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVV 464

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            WTA I A A  G GE+A+ELF EM +  G +P+ + F+ VL+ACSH G + Q W  F S
Sbjct: 465 TWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCS 524

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI-KSMPVEPNDVIWGSLLAACQKHQNV 657
           M    GV P   HY C+VDLLGRAG LGEA  L+ +    E + V W + L+ACQ + ++
Sbjct: 525 MGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDL 584

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           + +  AA+R++EL+PE     VLLSN+YA+ G+  +VAR+R +MK  G++K  G S IE+
Sbjct: 585 ERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEI 644

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
           N +VHEF   D SHP    I S L  ++  +++AGYVPD   VL DVDE++K  LL +HS
Sbjct: 645 NNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHS 704

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           E+LAMA G+IST     +RVVKNLR+C DCH+  K +S++  R+IIVRD +RFH F+ G 
Sbjct: 705 ERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGV 764

Query: 838 CSCSDFW 844
           CSC D+W
Sbjct: 765 CSCGDYW 771



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 142/338 (42%), Gaps = 65/338 (19%)

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + N +ID++ KCG  + A  +F+ +      SW+ +I   + +  +  AR +F  MPG D
Sbjct: 44  LTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARALFDSMPGFD 103

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-------------------------- 470
             +WN M+    + N  ++A ELF  M+S R  V                          
Sbjct: 104 AFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEEASALFRRMP 163

Query: 471 --DRVTMVGVASACGYLGALDLAKWIYAYI----EKNGIHCDMQLAT----ALVDM---- 516
             D VT   V     + G L  A+ ++  I    +++   C+  +A     A VD+    
Sbjct: 164 LWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDATACNAMIAAYGKNARVDLAEGL 223

Query: 517 ------------------FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
                             +A+ G    A + F RM +RD  A+TA    ++ +G    A 
Sbjct: 224 FAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGA- 282

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
               EMLR     D I +  +L   S  G +++   LF +M   H      V  G +V+L
Sbjct: 283 ---REMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAME--HRTVATTVVAGTLVNL 337

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
            G+ G + +A  ++ +MPV  + V W +++AA  ++ N
Sbjct: 338 YGKCGRVDDARRVLDAMPVRTS-VSWTAMIAAYAQNGN 374



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 5/206 (2%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T   + ++I  Y+  G   EAI+L+  +   G  P   T   V+++C        G ++H
Sbjct: 358 TSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIH 417

Query: 162 GAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDE--MSERNVVSWTSLICACARRD 218
             I     F + + + N +I  YG+CG++   R VF+   +  R+VV+WT++I A A+  
Sbjct: 418 ARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNG 477

Query: 219 LPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELG-DRVCAYIDELGMKANALM 276
           + +EA+ LF EMV + G +PN VT + V+SAC+ L  LE   +  C+   + G+      
Sbjct: 478 VGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDH 537

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKD 302
              LVD+  + G +  A++L    KD
Sbjct: 538 YCCLVDLLGRAGRLGEAEKLLLRHKD 563



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 8/157 (5%)

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC     L  AK ++  I ++    + +L   L+D+F +CGDP  A  VF R+   +  +
Sbjct: 16  ACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYS 75

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W+  I A         A  LF+ M   G   D+  +  ++ A +    ++    LF  M 
Sbjct: 76  WSCIIQAYVSSSRIHDARALFDSM--PGF--DAFTWNIMIAAYARINRLDDARELFHGMI 131

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
                   +V +  +V    R   L EA  L + MP+
Sbjct: 132 S----GRDVVSWAILVAGYARHDRLEEASALFRRMPL 164


>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
          Length = 562

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/558 (39%), Positives = 335/558 (60%), Gaps = 32/558 (5%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G++D A  +F +  +      NT+M  +V+     EAL    EM   G +PD  T  + +
Sbjct: 36  GSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLL 95

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A A+L  +  G   H ++L+ GLE    + N++I MY KCG+  + C            
Sbjct: 96  KACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCC------------ 143

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                               VF +M  R   SW+ ++       M+ + + L   M +E 
Sbjct: 144 -------------------AVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEG 184

Query: 468 I-KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
             + +   +V V SAC +LGALDL + ++ ++ +N    ++ + T+L++M+ +CG   + 
Sbjct: 185 YWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKG 244

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
           M +F++M K++  +++  I  +AM G G + + +F EML QG++PD IV+VGVL ACSH 
Sbjct: 245 MCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHA 304

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GLV +G   F  M   HG+ P I HYGCMVDL+GRAG + EAL+LIKSMP+EPNDV+W S
Sbjct: 305 GLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRS 364

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL+A + H N+     AA+++ +LD +K+  +V+LSN+YA A +W +VAR R  M  +G+
Sbjct: 365 LLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGL 424

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            + PG S +EV  K+H F S D  HP+  ++  ML +M  +L+  GY PD T VL DVDE
Sbjct: 425 SQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDE 484

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EKK  LS HS+KLA+A+ LI TS+  P+R+V+NLR+C DCH++ KL+S ++DREI VRD
Sbjct: 485 EEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITVRD 544

Query: 827 NNRFHFFRQGSCSCSDFW 844
            +RFH F+ G+CSC D+W
Sbjct: 545 RHRFHHFKDGACSCRDYW 562



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 217/430 (50%), Gaps = 23/430 (5%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           + E KQ H  ILK GL       S +V TCA +  + S+ YA   F    + +E  +  F
Sbjct: 1   MEEFKQSHARILKXGLFXDSFCASNLVATCA-LSDWGSMDYACSIFR---QMDEPGS--F 54

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +N+++RG+       EA+  Y E+A  G+ PD FT+P +L AC +  A  EG+QVH  I
Sbjct: 55  ZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHI 114

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           +K+G + DVFV+N LI+ YG+CG+I     VF++M+ER+V SW++LI A A   +  + +
Sbjct: 115 LKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCL 174

Query: 225 YLFFEMVEEGI-KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            L  +M  EG  +     +V V+SAC  L  L+LG  V  ++       N ++  +L++M
Sbjct: 175 RLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEM 234

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y+KCG +     LF +   +N +  + ++S     G  RE L I  EML  G  PD +  
Sbjct: 235 YLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVY 294

Query: 344 LSAVSASAQLGDLLCGRMCHGYV-LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           +  ++A +  G +  G  C   + L +G+E        M+D+  + GK + A  +   M 
Sbjct: 295 VGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMP 354

Query: 403 -NKTVVSWNSLIAGLIKNGDVE----SAREVFS--EMPGRDHISWNTMLG--------GL 447
                V W SL++    + +++    +A+++F        D++  + M            
Sbjct: 355 MEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAR 414

Query: 448 TQENMFEEAM 457
           T+ NMF + +
Sbjct: 415 TRTNMFSKGL 424



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 194/408 (47%), Gaps = 46/408 (11%)

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGEC-----GDIVDGRRVFDEMSERNVVSWTSL 210
           E  Q H  I+K G   D F   C  N    C     G +     +F +M E     + ++
Sbjct: 3   EFKQSHARILKXGLFXDSF---CASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTM 59

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           +    +    +EA+  + EM E G+KP++ T   ++ ACA+L  +E G +V A+I +LG+
Sbjct: 60  MRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGL 119

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           + +  + N+L+ MY KCG +     +F +  +R++   + +++ +  LG+  + L +L +
Sbjct: 120 ENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGD 179

Query: 331 MLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKC 388
           M   G  R +   ++S +SA   LG L  GR  HG++LRN + G + I  T +I+MY+KC
Sbjct: 180 MSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRN-VSGLNVIVETSLIEMYLKC 238

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G                      L  G+           +F +M  ++ +S++ M+ GL 
Sbjct: 239 G---------------------XLYKGMC----------LFQKMAKKNKLSYSVMISGLA 267

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDM 507
                 E + +F  ML + ++ D +  VGV +AC + G +      +  ++ ++GI   +
Sbjct: 268 MHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTI 327

Query: 508 QLATALVDMFARCGDPQRAMQVFRR--MEKRDVSAWTAAIGAMAMEGN 553
           Q    +VD+  R G    A+++ +   ME  DV  W + + A  +  N
Sbjct: 328 QHYGCMVDLMGRAGKIDEALELIKSMPMEPNDV-LWRSLLSASKVHNN 374


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/659 (35%), Positives = 358/659 (54%), Gaps = 52/659 (7%)

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV--TMVCVISACAKLQNLELGDRVCAY 264
           W   I A A      +AV LF  M       +SV  ++   + +CA L    LG  + A 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 265 IDELGMKANALMVNALVDMYMK--CGAVDTA-----------------KQLFGECKDRNL 305
               G  A+    NAL+++Y K  C  +D+                  +++F E  +R++
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  NT++      G   EAL  + +M   G RPD  T+ + +   A+  D+  G   HG+
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
             RNG +    + +++IDMY  C + + + ++FD++                        
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNL------------------------ 231

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                  P RDHI WN++L G  Q    EEA+ +FR ML   ++   VT   +   CG L
Sbjct: 232 -------PVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNL 284

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
            +L   K ++AY+   G   ++ ++++L+DM+ +CG+   A  +F +M   DV +WTA I
Sbjct: 285 ASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMI 344

Query: 546 GAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
              A+ G   +A+ LF  M     KP+ I F+ VLTACSH GLV++GW  F+SM++ +G+
Sbjct: 345 MGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGI 404

Query: 606 SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAE 665
            P + H+  + D LGRAG L EA + I  M ++P   +W +LL AC+ H+N  +A   A+
Sbjct: 405 VPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAK 464

Query: 666 RITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFT 725
           +I EL+P   G HV+LSN+Y+++G+W   A +R  M+++G++K P  S IEV  K+H F 
Sbjct: 465 KIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFV 524

Query: 726 SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
           + D SHP  + I   L   + ++   G+VP+  +V  D++E+ K Y+L  HSEKLA+ FG
Sbjct: 525 AHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFG 584

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +IST     IRV+KNLR+C DCH+  K +SK+ DREI+VRD NRFH F+ G+CSC DFW
Sbjct: 585 IISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 222/514 (43%), Gaps = 57/514 (11%)

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKF--TFPFVLNACTKSSAFGEGVQVHGAIVKM 167
           IR  +  G   +A+SL++ +            + P  L +C        G  +H   ++ 
Sbjct: 20  IRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRS 79

Query: 168 GFDRDVFVENCLINFY-------------------GECGDIVDGRRVFDEMSERNVVSWT 208
           G   D F  N L+N Y                   G        R+VFDEM ER+VVSW 
Sbjct: 80  GAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWN 139

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           +L+  CA      EA+    +M  EG +P+S T+  V+   A+  +++ G  V  +    
Sbjct: 140 TLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRN 199

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G  ++  + ++L+DMY  C   D + ++F     R+ +L N++++   + G   EAL I 
Sbjct: 200 GFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIF 259

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             ML  G RP  VT  S +     L  L  G+  H YV+  G E    I +++IDMY KC
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKC 319

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G+  +A  IFD MS+  VVSW ++I G   +G            P R             
Sbjct: 320 GEISIAHCIFDKMSSPDVVSWTAMIMGYALHG------------PAR------------- 354

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDM 507
                 EA+ LF  M     K + +T + V +AC + G +D   K+  +     GI   +
Sbjct: 355 ------EALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTL 408

Query: 508 QLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           +   AL D   R G+   A     +M+ K   S W+  + A  +  N   A E+  +++ 
Sbjct: 409 EHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 468

Query: 567 QGIKPDSIVFVGVLTAC-SHGGLVNQGWHLFRSM 599
             ++P SI    VL+   S  G  N+  HL  SM
Sbjct: 469 --LEPRSIGSHVVLSNMYSASGRWNEAAHLRESM 500



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 174/357 (48%), Gaps = 15/357 (4%)

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
           G+  +    +K FD  I+ +  S     +N+L+ G +  G   EA+    ++   G  PD
Sbjct: 115 GSSTAFESVRKVFDEMIERDVVS-----WNTLVLGCAEEGRHHEALGFVRKMCREGFRPD 169

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
            FT   VL    + +    G++VHG   + GFD DVFV + LI+ Y  C       +VFD
Sbjct: 170 SFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFD 229

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
            +  R+ + W SL+  CA+    +EA+ +F  M++ G++P  VT   +I  C  L +L  
Sbjct: 230 NLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRF 289

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G ++ AY+   G + N  + ++L+DMY KCG +  A  +F +    ++V    ++  Y  
Sbjct: 290 GKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYAL 349

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLE 372
            G AREAL + + M L   +P+ +T L+ ++A +  G +  G      M + Y +   LE
Sbjct: 350 HGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLE 409

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESAREV 428
            + ++ +T+     + G+ + A      M  K   S W++L+     + +   A EV
Sbjct: 410 HFAALADTL----GRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEV 462


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/593 (36%), Positives = 343/593 (57%), Gaps = 32/593 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++  C   + L  G  V A+I +   + + +M N L++MY KCG+++ A+++F +   R+
Sbjct: 66  LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
            V   T++S Y +     +AL   ++ML  G  P+  T+ S + A+A      CG   HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           + ++ G +    + + ++D+Y + G                                ++ 
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGL-------------------------------MDD 214

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A+ VF  +  R+ +SWN ++ G  + +  E+A+ELF+ ML +  +    +   +  AC  
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
            G L+  KW++AY+ K+G          L+DM+A+ G    A ++F R+ KRDV +W + 
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           + A A  G G++AV  F EM R GI+P+ I F+ VLTACSH GL+++GWH +  M    G
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DG 393

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + P+  HY  +VDLLGRAG L  AL  I+ MP+EP   IW +LL AC+ H+N ++ AYAA
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           E + ELDP+  G HV+L NIYAS G+W + ARVR +MKE G++K P  S +E+   +H F
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 513

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            + DE HP+   I+    E+  ++++ GYVPD ++V++ VD+QE++  L +HSEK+A+AF
Sbjct: 514 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 573

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
            L++T     I + KN+R+C DCH+  KL SKV  REIIVRD NRFH F+  S
Sbjct: 574 ALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 209/429 (48%), Gaps = 32/429 (7%)

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           +L G  I  D+  +  +L  CT      +G  VH  I++  F  D+ + N L+N Y +CG
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            + + R+VF++M +R+ V+WT+LI   ++ D P +A+  F +M+  G  PN  T+  VI 
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           A A  +    G ++  +  + G  +N  + +AL+D+Y + G +D A+ +F   + RN V 
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N +++ + R     +AL +   ML  G RP   +  S   A +  G L  G+  H Y++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           ++G +      NT++DMY K G    A +IFD ++ + VVSWNSL+    ++G       
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG------- 342

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                 G++ + W            FEE       M    I+ + ++ + V +AC + G 
Sbjct: 343 -----FGKEAVWW------------FEE-------MRRVGIRPNEISFLSVLTACSHSGL 378

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIG 546
           LD     Y  ++K+GI  +      +VD+  R GD  RA++    M     +A W A + 
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438

Query: 547 AMAMEGNGE 555
           A  M  N E
Sbjct: 439 ACRMHKNTE 447



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 211/444 (47%), Gaps = 24/444 (5%)

Query: 17  VTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQP---HCHILKQGLGHKPSYISKVVC 72
           + T +N  +    P D     +L K C     L Q    H HIL+    H     + ++ 
Sbjct: 44  LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
             A+ G+ E    A+K F+   + +        + +LI GYS      +A+  + ++  F
Sbjct: 104 MYAKCGSLEE---ARKVFEKMPQRD-----FVTWTTLISGYSQHDRPCDALLFFNQMLRF 155

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G  P++FT   V+ A         G Q+HG  VK GFD +V V + L++ Y   G + D 
Sbjct: 156 GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           + VFD +  RN VSW +LI   ARR   ++A+ LF  M+ +G +P+  +   +  AC+  
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             LE G  V AY+ + G K  A   N L+DMY K G++  A+++F     R++V  N+++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL- 371
           + Y + G  +EA+   +EM   G RP+ ++ LS ++A +  G L  G   +  + ++G+ 
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395

Query: 372 -EGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SA 425
            E W  +  T++D+  + G    A R  + M    T   W +L+     + + E    +A
Sbjct: 396 PEAWHYV--TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453

Query: 426 REVFS---EMPGRDHISWNTMLGG 446
             VF    + PG   I +N    G
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASG 477



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 26/205 (12%)

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           I  DR     +   C     L   + ++A+I ++    D+ +   L++M+A+CG  + A 
Sbjct: 56  IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS--- 584
           +VF +M +RD   WT  I   +       A+  FN+MLR G  P+      V+ A +   
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175

Query: 585 --------HGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLGRAGLLGEALDLIKSM 635
                   HG  V  G+                VH G  ++DL  R GL+ +A  +  ++
Sbjct: 176 RGCCGHQLHGFCVKCGF-------------DSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIA 660
               NDV W +L+A   +    + A
Sbjct: 223 ESR-NDVSWNALIAGHARRSGTEKA 246


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/702 (35%), Positives = 372/702 (52%), Gaps = 41/702 (5%)

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDV--FVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           ++SS  G  V  H   +    D  +  F+ N L+N Y +       + V    + R VV+
Sbjct: 20  SRSSLLGRAVHAH---ILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVT 76

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           WTSLI  C        A+  F  M  E + PN  T  CV  A A L     G ++ A   
Sbjct: 77  WTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALAL 136

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           + G   +  +  +  DMY K G    A+ +F E   RNL   N  MSN V+ G   +A+A
Sbjct: 137 KGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIA 196

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
              + L     P+ +T  + ++A A +  L  GR  HG+++R+      S+ N +ID Y 
Sbjct: 197 AFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYG 256

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG--RDHISWNTML 444
           KCG                               D+ S+  VFS +    R+ +SW ++L
Sbjct: 257 KCG-------------------------------DIVSSELVFSRIGSGRRNVVSWCSLL 285

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
             L Q +  E A  +F +   + ++     +  V SAC  LG L+L + ++A   K  + 
Sbjct: 286 AALVQNHEEERACMVF-LQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVE 344

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            ++ + +ALVD++ +CG  + A QVFR M +R++  W A IG  A  G+ + A+ LF EM
Sbjct: 345 ENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEM 404

Query: 565 LRQ--GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
                GI    +  V VL+ACS  G V +G  +F SM   +G+ P   HY C+VDLLGR+
Sbjct: 405 TSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRS 464

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           GL+  A + IK MP+ P   +WG+LL AC+ H    +   AAE++ ELDP+ SG HV+ S
Sbjct: 465 GLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFS 524

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           N+ ASAG+W     VR +M++ GI+K  G S + V  +VH F + D  H + + I +ML 
Sbjct: 525 NMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLA 584

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           ++   ++ AGYVPD    L D++E+EK   + +HSEK+A+AFGLI+  + +PIR+ KNLR
Sbjct: 585 KLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLR 644

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCHS  K +SK+  REIIVRDNNRFH F+ G CSC D+W
Sbjct: 645 ICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 199/438 (45%), Gaps = 37/438 (8%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +LP+ FTFP V  A         G Q+H   +K G   DVFV     + Y + G   + R
Sbjct: 105 VLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEAR 164

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
            +FDEM  RN+ +W + +    +     +A+  F + +    +PN++T    ++ACA + 
Sbjct: 165 NMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIV 224

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNTI 311
           +LELG ++  +I     + +  + N L+D Y KCG + +++ +F       RN+V   ++
Sbjct: 225 SLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSL 284

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           ++  V+      A  +  +       P    + S +SA A+LG L  GR  H   L+  +
Sbjct: 285 LAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALALKACV 343

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           E    + + ++D+Y KCG  E A ++F  M  + +V+WN++I G    GDV+ A  +F E
Sbjct: 344 EENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQE 403

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           M                                S  I +  VT+V V SAC   GA++  
Sbjct: 404 MTSG-----------------------------SCGIALSYVTLVSVLSACSRAGAVERG 434

Query: 492 KWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMA 549
             I+  +  + GI    +    +VD+  R G   RA +  +RM     +S W A +GA  
Sbjct: 435 LQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACK 494

Query: 550 MEGN---GEQAVELFNEM 564
           M G    G+ A E   E+
Sbjct: 495 MHGKTKLGKIAAEKLFEL 512


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/771 (33%), Positives = 416/771 (53%), Gaps = 41/771 (5%)

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
           G   S+  A+K FD           +  +N++I  Y+      +AI ++  +   G+  +
Sbjct: 146 GKCSSVEDARKVFD-----GIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAE 200

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR--DVFVENCLINFYGECGDIVDGRRV 195
           + TF  VL+AC+K         V   + +   D   D      L+NFYG CGD+    R 
Sbjct: 201 RITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRA 260

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           F       +++ T++I    +R+   EA+ LF  M+ EG+K + +  + V++AC+  + L
Sbjct: 261 FSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGL 319

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           E G  +  ++ E+    +    NAL++MY KCG+++ A ++F   + R+++  NTI++ +
Sbjct: 320 EEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAH 379

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            +     EAL +L  M L G + D+++ ++A+   A    L  GRM H +++ +G++   
Sbjct: 380 GQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADV 439

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + N ++DMY  C   + A R                               VF  M  R
Sbjct: 440 MLDNAILDMYGSCKSTDDASR-------------------------------VFRAMKAR 468

Query: 436 DHISWNTMLGGLT-QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           D +SWN M+     Q  +  EA+ LF+ M       D ++ V   SAC    +L   K +
Sbjct: 469 DQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLL 528

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +  I + G+  +M +A A+++M+A+ G    A ++F +M   DV +W   I A A  G+ 
Sbjct: 529 HDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHA 588

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT-DIHGVSPQIVHYG 613
           +Q +  F  M  +G  P+ + FV V++ACSHGGLV  G  LF S+  D   +SP+  HY 
Sbjct: 589 DQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYY 648

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVDL+ RAG L  A   I + P++P+ VI  ++L A + H++V+ A  +AE + EL P+
Sbjct: 649 CMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPD 708

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
           +S  +V+LSN+Y   GK    A++R  M E+ IRK P  SSI V  +VHEF +GD ++  
Sbjct: 709 RSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNAR 768

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I   L  ++  +  AGY PD T +L DV +++KK LLS+HSEKLA+AFGLIST+   
Sbjct: 769 TPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGT 828

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +R++KNLR+C DCH+  K +SK+  REI+VRD++RFH F  G+CSC D+W
Sbjct: 829 SLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 173/623 (27%), Positives = 300/623 (48%), Gaps = 48/623 (7%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY-IKDNET 99
           + ++L+  K+ H  I K  +   P     +V      G   SL  A+  FD   ++D  T
Sbjct: 10  DSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCG---SLIDAKACFDRMPVQDALT 66

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF-GEGV 158
                 +  LIR +  IG   +A+ L+  +   G+ P    F  VL AC+       EG 
Sbjct: 67  ------WARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++HG +     + D +V   L++ YG+C  + D R+VFD +  + VV W ++I A A++D
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD--RVCAYIDELGMKANALM 276
             ++A+ +F+ M+ EG+K   +T + V+ AC+KL++LE+    ++C    E     ++  
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             ALV+ Y  CG ++ A + F   +   L+L   +++ Y +     EAL +   MLL G 
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHR-LELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           + DR+  ++ ++A +    L  GRM HG++     +   +  N +I+MY KCG       
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGS------ 353

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    +E A EVF  M  RD ISWNT++    Q +   EA
Sbjct: 354 -------------------------LEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEA 388

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + L  +M  + +K D+++ V     C    AL   + I+++I ++GI  D+ L  A++DM
Sbjct: 389 LHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDM 448

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN-GEQAVELFNEMLRQGIKPDSIV 575
           +  C     A +VFR M+ RD  +W A I A A +     +A+ LF +M   G  PD I 
Sbjct: 449 YGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVIS 508

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FV  L+AC+    + +G  L   + +  G+   +     ++++  ++G L  A  +   M
Sbjct: 509 FVAALSACAAQASLAEGKLLHDRIRET-GLESNMTVANAVLNMYAKSGSLVLARKMFGKM 567

Query: 636 PVEPNDVIWGSLLAACQKHQNVD 658
           P+ P+ + W  +++A  +H + D
Sbjct: 568 PL-PDVISWNGMISAFAQHGHAD 589



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 238/510 (46%), Gaps = 37/510 (7%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L+    S +   G +VH  I K   DR  F+ + L+  Y +CG ++D +  FD M  ++
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQNLELGDRVC 262
            ++W  LI A  +    ++A++LF  M  EG+ P +   V V+ AC A  + LE G R+ 
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
             +    M+++  +   L+ MY KC +V+ A+++F   + + +V  N +++ Y +     
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW--DSICNT 380
           +A+ +   MLL G + +R+T +  + A ++L DL   ++    V     +     S    
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATA 243

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +++ Y  CG  E A R F     + +++                                
Sbjct: 244 LVNFYGSCGDLEQAFRAFSRHRLELILA-------------------------------- 271

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
             M+   TQ   ++EA+ELF+VML E +K+DR+  + V +AC     L+  + I+ ++ +
Sbjct: 272 TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMRE 331

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
                 +    AL++M+ +CG  + A++VFR M+ RDV +W   I A        +A+ L
Sbjct: 332 IRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHL 391

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
            + M   G+K D I FV  L  C+    + +G  +  S     G+   ++    ++D+ G
Sbjct: 392 LHLMQLDGVKADKISFVNALPLCAASEALAKG-RMIHSWIVESGIKADVMLDNAILDMYG 450

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
                 +A  + ++M    + V W +++ A
Sbjct: 451 SCKSTDDASRVFRAMKAR-DQVSWNAMITA 479



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 222/447 (49%), Gaps = 31/447 (6%)

Query: 36  IGSLKNCKTLNELK-----------QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
           IG L  C  L +L+           + H H+      H  S+ + +V      G  E   
Sbjct: 205 IGVLDACSKLKDLEVAKLVKLCVEEREHDHL------HDSSFATALVNFYGSCGDLEQ-- 256

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
            A +AF  +         L +  ++I  Y+      EA+ L+  +   G+  D+     V
Sbjct: 257 -AFRAFSRH------RLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAV 309

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           LNAC+      EG  +HG + ++ FDR V   N LIN YG+CG + +   VF  M  R+V
Sbjct: 310 LNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDV 369

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +SW ++I A  +     EA++L   M  +G+K + ++ V  +  CA  + L  G  + ++
Sbjct: 370 ISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSW 429

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY-VRLGLARE 323
           I E G+KA+ ++ NA++DMY  C + D A ++F   K R+ V  N +++ Y  +  L+ E
Sbjct: 430 IVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSE 489

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +  +M LHG  PD ++ ++A+SA A    L  G++ H  +   GLE   ++ N +++
Sbjct: 490 ALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLN 549

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM--PGR--DHIS 439
           MY K G   +A ++F  M    V+SWN +I+   ++G  +     F  M   G+  + ++
Sbjct: 550 MYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVT 609

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSE 466
           + +++   +   + ++ ++LF  +L +
Sbjct: 610 FVSVVSACSHGGLVKDGVQLFVSLLHD 636


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 282/877 (32%), Positives = 411/877 (46%), Gaps = 171/877 (19%)

Query: 39  LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L+ C+ L  L+   Q H  ++  G+       S+++    Q G  E    A++ FD   +
Sbjct: 96  LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED---ARRMFDKMSE 152

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL---------- 145
            N     +F + +++  Y  +G   E I L+  +   G+ PD F FP V           
Sbjct: 153 RN-----VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYR 207

Query: 146 ----------------NACTKSS-------------------------AFGEGVQVHGAI 164
                           N+C K S                          F   + V G  
Sbjct: 208 VGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYT 267

Query: 165 VKMGFDR---------------DVFVENCLINFYGECGDIVDGRRVFDEMS-----ERNV 204
            K  F +               D    N +I+ Y + G   +  + F EM      + NV
Sbjct: 268 SKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNV 327

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV--- 261
           VSWT+LI    +     EA+ +F +MV EG+KPNS+T+   +SAC  L  L  G  +   
Sbjct: 328 VSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGY 387

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
           C  ++EL   ++ L+ N+LVD Y KC +V+ A++ FG  K  +LV  N +++ Y   G  
Sbjct: 388 CIKVEEL--DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGD-------------------------- 355
            EA+ +L EM   G  PD +T    V+   Q GD                          
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505

Query: 356 ---------LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
                    L  G+  HGYVLRN +E    + + +I MY  C   E+AC           
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVAC----------- 554

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                                VFSE+  RD + WN+++    Q      A++L R M   
Sbjct: 555 --------------------SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS 594

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            ++V+ VTMV    AC  L AL   K I+ +I + G+     +  +L+DM+ RCG  Q++
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKS 654

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            ++F  M +RD+ +W   I    M G G  AV LF      G+KP+ I F  +L+ACSH 
Sbjct: 655 RRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHS 714

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GL+ +GW  F+ M   + + P +  Y CMVDLL RAG   E L+ I+ MP EPN  +WGS
Sbjct: 715 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 774

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+ H N D+A YAA  + EL+P+ SG +VL++NIY++AG+W + A++R  MKE+G+
Sbjct: 775 LLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGV 834

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            K PG S IEV  K+H F  GD SHP M  IS          +D           LDVDE
Sbjct: 835 TKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISG---------KDGK---------LDVDE 876

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
            EK++ L  HSEK+A+AFGLIST+   P+R++KNLR+
Sbjct: 877 DEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRV 913



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 221/487 (45%), Gaps = 81/487 (16%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++  C KL NL LG +V A +   G+     + + L+++Y + G V+ A+++F +  +RN
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +     IM  Y  LG   E + +   M+  G RPD         A ++L +   G+  + 
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           Y+L  G EG   +  +++DM++KCG+ ++A R F+ +  K V  WN +++G    G+ + 
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 425 AREVFSEMP----GRDHISWNTMLGGLTQENMFE-------------------------- 454
           A +  S+M       D ++WN ++ G  Q   FE                          
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334

Query: 455 ----------EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY-IEKNGI 503
                     EA+ +FR M+ E +K + +T+    SAC  L  L   + I+ Y I+   +
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D+ +  +LVD +A+C   + A + F  +++ D+ +W A +   A+ G+ E+A+EL +E
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M  QGI+PD I + G++T                              YG      G+A 
Sbjct: 455 MKFQGIEPDIITWNGLVTG--------------------------FTQYGD-----GKAA 483

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV----DIAAYAAERITELDPEKSGVHV 679
           L  E    + SM ++PN       LAAC + +N+    +I  Y      EL    +GV  
Sbjct: 484 L--EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELS---TGVGS 538

Query: 680 LLSNIYA 686
            L ++Y+
Sbjct: 539 ALISMYS 545



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 170/398 (42%), Gaps = 47/398 (11%)

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           R G+   A  +L  M L  P        S +    +L +L  G   H  ++ NG++  + 
Sbjct: 66  RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + + ++++Y + G  E A R+FD MS + V SW +++      GD               
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGD--------------- 170

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
                           +EE ++LF +M++E ++ D      V  AC  L    + K +Y 
Sbjct: 171 ----------------YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           Y+   G   +  +  +++DMF +CG    A + F  +E +DV  W   +     +G  ++
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A++  ++M   G+KPD + +  +++  +  G   +    F  M  +    P +V +  ++
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334

Query: 617 DLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQK----HQNVDIAAYAAERITE 669
               + G   EAL + + M +E   PN +   S ++AC          +I  Y   ++ E
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI-KVEE 393

Query: 670 LDPEKSGVHVLLSNI---YASAGKWTNVARVRLQMKEQ 704
           LD +     +L+ N    Y +  +   VAR +  M +Q
Sbjct: 394 LDSD-----LLVGNSLVDYYAKCRSVEVARRKFGMIKQ 426


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/676 (35%), Positives = 370/676 (54%), Gaps = 41/676 (6%)

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKP-NSVTMVCVISACAKLQNLELGDRVCAY 264
           ++T L+  C R +   +A  L   M     +P +S     ++   AK   L     +   
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNL--- 80

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
            D++ +K +    NAL+  Y K G++   K  F     R+ V  NT ++ +      +E+
Sbjct: 81  FDKM-LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +   M   G  P   T++S ++ASAQL DL  G+  HG ++     G   I N + DM
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD----------------------- 421
           Y KCG+ E A  +FD ++ K +VSWN +I+G  KNG                        
Sbjct: 200 YAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM 259

Query: 422 ------------VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                       V+ AR VFSE   +D + W  M+ G  +    E+A+ LF  ML E I+
Sbjct: 260 STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D  T+  V S+C  L +L   + ++      G++ ++ +++AL+DM+++CG    A  V
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSV 379

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M  R+V +W A I   A  G+ + A+ELF  ML+Q  KPD++ F+G+L+AC H   +
Sbjct: 380 FNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWI 439

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            QG   F S+T+ HG++P + HY CMV+LLGR G + +A+ LIK+M  +P+ +IW +LL+
Sbjct: 440 EQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
            C    ++  A  AA  + ELDP  +  +++LSN+YAS G+W +VA VR  MK + ++K 
Sbjct: 500 ICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKF 559

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
            G S IE++ +VH FTS D +HPE  +I   L  +  +L++ G+ P+   VL DV E EK
Sbjct: 560 AGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEK 619

Query: 770 KYLLSHHSEKLAMAFGLISTSKTM-PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
              +  HSEKLA+AFGLI     + PIR++KN+R+C DCH F K  S++  R+II+RD+N
Sbjct: 620 FKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSN 679

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F  G CSC+D W
Sbjct: 680 RFHHFSTGKCSCNDNW 695



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 213/450 (47%), Gaps = 68/450 (15%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+ I G+S      E++ L+  +   G  P ++T   +LNA  + S    G Q+HG+I+
Sbjct: 123 YNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSII 182

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
              F  +VF+ N L + Y +CG+I   R +FD ++++N+VSW  +I   A+   P++ + 
Sbjct: 183 VRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIG 242

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L  +M   G  P+ VTM  +I+A                                   Y 
Sbjct: 243 LLHQMRLSGHMPDQVTMSTIIAA-----------------------------------YC 267

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           +CG VD A+++F E K++++V    +M  Y + G   +AL + +EMLL    PD  T+ S
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            VS+ A+L  L  G+  HG  +  GL     + + +IDMY KCG  + A  +F+ M  + 
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           VVSWN++I G  +NG                                 ++A+ELF  ML 
Sbjct: 388 VVSWNAMIVGCAQNGHD-------------------------------KDALELFENMLQ 416

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQ 524
           ++ K D VT +G+ SAC +   ++  +  +  I  ++G+   +     +V++  R G  +
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIE 476

Query: 525 RAMQVFRRM-EKRDVSAWTAAIGAMAMEGN 553
           +A+ + + M    D   W+  +   + +G+
Sbjct: 477 QAVALIKNMAHDPDFLIWSTLLSICSTKGD 506



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 165/358 (46%), Gaps = 63/358 (17%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           ++ D  T   L  +N +I GY+  G   + I L  ++   G +PD+ T   ++ A     
Sbjct: 211 WLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA----- 265

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
                                         Y +CG + + RRVF E  E+++V WT+++ 
Sbjct: 266 ------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMV 295

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             A+    ++A+ LF EM+ E I+P+S T+  V+S+CAKL +L  G  V       G+  
Sbjct: 296 GYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNN 355

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N L+ +AL+DMY KCG +D A+ +F     RN+V  N ++    + G  ++AL + + ML
Sbjct: 356 NLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENML 415

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT------------ 380
               +PD VT +  +SA             H   +  G E +DSI N             
Sbjct: 416 QQKFKPDNVTFIGILSAC-----------LHCNWIEQGQEYFDSITNQHGMTPTLDHYAC 464

Query: 381 MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDV----ESAREVFSEMP 433
           M+++  + G+ E A  +  +M+ +   + W++L++     GD+     +AR +F   P
Sbjct: 465 MVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDP 522



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 132/257 (51%), Gaps = 12/257 (4%)

Query: 61  GHKPSYI--SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGL 118
           GH P  +  S ++    Q G  +    A++ F  + + +     +  + +++ GY+  G 
Sbjct: 251 GHMPDQVTMSTIIAAYCQCGRVDE---ARRVFSEFKEKD-----IVCWTAMMVGYAKNGR 302

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
             +A+ L+ E+    I PD +T   V+++C K ++   G  VHG  +  G + ++ V + 
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSA 362

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           LI+ Y +CG I D R VF+ M  RNVVSW ++I  CA+    K+A+ LF  M+++  KP+
Sbjct: 363 LIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPD 422

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +VT + ++SAC     +E G      I ++ GM         +V++  + G ++ A  L 
Sbjct: 423 NVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALI 482

Query: 298 GE-CKDRNLVLCNTIMS 313
                D + ++ +T++S
Sbjct: 483 KNMAHDPDFLIWSTLLS 499


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/575 (39%), Positives = 342/575 (59%), Gaps = 39/575 (6%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N  ++ ALV +      +  A Q+F + +  N+   NT++  +        A+ +  +M 
Sbjct: 71  NKHLIFALVSL---SAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQM- 126

Query: 333 LHGPR---PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            H      PD  T      A A+L D+  G   H  V+RNG +    + N+++ MY    
Sbjct: 127 -HAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMY---- 181

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
                  +F                     G  ESA +VF  M  RD ++WN+++ G   
Sbjct: 182 ------SVF---------------------GFAESAYQVFEIMSYRDRVAWNSVINGFAL 214

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
             M  EA+ L+R M SE ++ D  TMV + SAC  LGAL L + ++ Y+ K G+  +   
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
           + AL+D++++CG+ + A +VF  ME+R V +WT+ I  +A+ G G +A++LF E+ RQG+
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGL 334

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           KP  I FVGVL ACSH G++++G++ FR M + +G+ P+I H+GCMVDLL RAG +G+A 
Sbjct: 335 KPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAY 394

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           D I++MPV PN VIW +LL AC  H ++++   A   I  L+   SG  VLLSN+YAS  
Sbjct: 395 DYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
           +W +V  VR  M  +G++K PG S +E+  +V+EF  GD SHP+     +ML ++   L+
Sbjct: 455 RWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLK 514

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
             GYVP   NVL D++E+EK+  LSHH+EK+A+AF L++T    PIR++KNLR+C DCH 
Sbjct: 515 IEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHL 574

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             KL+SKV++REIIVRD +RFH F+ GSCSC D+W
Sbjct: 575 AIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 229/483 (47%), Gaps = 39/483 (8%)

Query: 46  NELKQPHCHILKQGLG-HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           ++LKQ H   ++ G+    P +   ++     +     +++A + F+     N     +F
Sbjct: 49  SKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSA--PMSFAAQIFNQIQAPN-----IF 101

Query: 105 MYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
            +N++IRG++       A+ L+ ++ A   ILPD  TFPF+  A  K      G  +H  
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +V+ GFD   FV+N L++ Y   G      +VF+ MS R+ V+W S+I   A   +P EA
Sbjct: 162 VVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEA 221

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + L+ EM  EG++P+  TMV ++SAC +L  L LG+RV  Y+ ++G+  N    NAL+D+
Sbjct: 222 LTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDL 281

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG    A+++F E ++R++V   +++      GL  EAL +  E+   G +P  +T 
Sbjct: 282 YSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITF 341

Query: 344 LSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +  + A +  G L  G     RM   Y +   +E        M+D+  + GK   A   +
Sbjct: 342 VGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHH----GCMVDLLCRAGKVGDA---Y 394

Query: 399 DHMSNKTV----VSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           D++ N  V    V W +L+     +G +   E AR     +  R    +  +      E 
Sbjct: 395 DYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
            + +   + ++ML          M GV    GY   ++L   +Y +I  +  H   +   
Sbjct: 455 RWLDVQNVRKIML----------MKGVKKTPGY-SLVELKNRVYEFIMGDRSHPQSEETY 503

Query: 512 ALV 514
           A++
Sbjct: 504 AML 506


>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/552 (40%), Positives = 335/552 (60%), Gaps = 6/552 (1%)

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           LF +    N  L + ++  Y R G    ++ +   ML +   P   T  +  S    L +
Sbjct: 68  LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKN 124

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
              G   H +    G      + NT+I MY+K G  + A ++FD M ++ VV+W  LI  
Sbjct: 125 PSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVA 184

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
             ++GD++SA E+F  +P +D ++W +M+ G +Q  M ++A++ FR M    +  D +T+
Sbjct: 185 YARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITL 244

Query: 476 VGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           VG  SAC  LG    A WI    E +  G   ++ + +AL+DM+++CG+ + A  VF+ M
Sbjct: 245 VGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGM 304

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
           ++ +V ++++ I   A+ G    A++LF EML  GIKP+ + FVG+ TACSH G+V QG 
Sbjct: 305 KEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQ 364

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
            LF +M + +GVSP   HY CM DLLGRAG L +AL L+++MP+EPN  +WG+LL A   
Sbjct: 365 QLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHI 424

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H N D+A  A+  + EL+P+  G ++LLS  YA A KW +V+RVR  M+E+ +RK PG S
Sbjct: 425 HGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCS 484

Query: 714 SIEV-NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
            +E  NG +HEF +GD  HPE+N I   L ++  RL+  GY P L +V  D+D++ K+ L
Sbjct: 485 WVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCL 544

Query: 773 LSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHF 832
           L  HSEKLA+A+GL+ST     I+++KNLR+C DCH      SK+  R+IIVRDN RFH 
Sbjct: 545 LVSHSEKLALAYGLLSTDAGSTIKIMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHH 604

Query: 833 FRQGSCSCSDFW 844
           F  G+CSC++FW
Sbjct: 605 FLNGACSCNNFW 616



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 198/449 (44%), Gaps = 63/449 (14%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSY-ISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           +C TLN  KQ H HI +  L H+ SY I+ ++     +      TY    F      N  
Sbjct: 20  HCTTLNHAKQLHAHIYRNNL-HQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNP- 77

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
               F+Y++LIR Y+  G    +I LY  +    + P  FTF   L +  K+ + G  + 
Sbjct: 78  ----FLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFS-ALFSLLKNPSLGSQLH 132

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD- 218
           +H  +   GF  D++V N +I+ Y + G +   R+VFDEM  R+VV+WT LI A AR   
Sbjct: 133 LHAFL--FGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGD 190

Query: 219 ------------------------------LPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
                                         +PK+A+  F +M E G+  + +T+V  ISA
Sbjct: 191 MDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISA 250

Query: 249 CAKLQNLELGD--RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           CA+L      D  R  A     G  +N  + +AL+DMY KCG V+ A  +F   K+ N+ 
Sbjct: 251 CAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVF 310

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
             ++++  +   G AR A+ +  EML +G +P+ VT +   +A +  G +  G+   G +
Sbjct: 311 SYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAM 370

Query: 367 LR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
               G+         M D+  + G  E A +                   L++   +E  
Sbjct: 371 KECYGVSPTADHYACMADLLGRAGHLEKALQ-------------------LVQTMPMEPN 411

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFE 454
             V+  + G  HI  N  +  +   ++FE
Sbjct: 412 GGVWGALLGASHIHGNPDVAEIASRSLFE 440


>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
 gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
 gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
          Length = 648

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/481 (43%), Positives = 309/481 (64%), Gaps = 2/481 (0%)

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           VL  G +    + N++I  Y+ CG    A ++FD M  K V+SW S++    ++GD+ SA
Sbjct: 168 VLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSA 227

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
            EVF   P +D ++W  M+ G  Q  M  +A+E+F  M    + +D V++ G  SAC  L
Sbjct: 228 EEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQL 287

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
           GAL  A W+    E+ G   ++ + + LVDM+A+CG    A +VF  M++++V  +++ I
Sbjct: 288 GALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMI 347

Query: 546 GAMAMEGNGEQAVELFNEML-RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
             +A  G   +A+ LF EM+ R  ++P+ + F+GVLTACSH G+V +G + F  M D +G
Sbjct: 348 AGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYG 407

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + P   HY CMVDLLGRAGL+ EALDL++SM V P+  +WG+LL AC+ H   +IA   A
Sbjct: 408 IMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLGACRIHGKSEIAKVVA 467

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE-VNGKVHE 723
           E + +L+PE  G +VLLSNI ASAGKW  V++VR+ M++Q ++K P  S  E  +G VH+
Sbjct: 468 EHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRKQRLKKDPAVSLFEGRDGLVHQ 527

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F +GD +HP  + I   L E+  +L+  GYVP L++++ DV+++EK+ LL  HSEKLA++
Sbjct: 528 FFAGDNAHPRTHEIKKALLELVAKLKLEGYVPILSSIVYDVNDEEKERLLMGHSEKLALS 587

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           FGL++      IR++KNLR+C DCH F +LVS+V   EIIVRDN RFH F+ G CSC  F
Sbjct: 588 FGLLTLGSGCTIRIIKNLRICDDCHLFMQLVSRVESVEIIVRDNMRFHHFKNGECSCGGF 647

Query: 844 W 844
           W
Sbjct: 648 W 648



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 168/375 (44%), Gaps = 46/375 (12%)

Query: 141 FPFVLNACTKSSAFGEGVQVHG-----AIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
            PF  +   KS+     +         +++  GFDR  FVEN LI  Y  CGD+   R+V
Sbjct: 140 LPFAFSTLAKSATASRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACGDVGAARKV 199

Query: 196 FDEMSERNVVSWTSLICA----------------CARRDL---------------PKEAV 224
           FDEM E++V+SWTS++ A                C  +D+               P +A+
Sbjct: 200 FDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKAL 259

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            +F  M E G+  + V++   ISACA+L  L     V    +  G   N ++ + LVDMY
Sbjct: 260 EVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMY 319

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTM 343
            KCG +D A ++F   +++N+   +++++     G A EA+A+  EM+      P+ VT 
Sbjct: 320 AKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTF 379

Query: 344 LSAVSASAQLGDLLCGRMCHGYVL-RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           +  ++A +  G +  GR     +  + G+         M+D+  + G  + A  +   MS
Sbjct: 380 IGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMS 439

Query: 403 -NKTVVSWNSLIAGLIKNGDVESAREV----FSEMPGRDHISWNTMLGG-LTQENMFEEA 456
                  W +L+     +G  E A+ V    F   P  + I    +L   L     +EE 
Sbjct: 440 VTPHGGVWGALLGACRIHGKSEIAKVVAEHLFKLEP--ESIGNYVLLSNILASAGKWEEV 497

Query: 457 MELFRVMLSERIKVD 471
            ++  +M  +R+K D
Sbjct: 498 SKVRILMRKQRLKKD 512



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 2/193 (1%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +++ GY+   + V+A+ ++  +A  G++ D+ +    ++AC +  A      V     
Sbjct: 242 WTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAE 301

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + GF  +V V + L++ Y +CG I +  +VF  M E+NV +++S+I   A      EA+ 
Sbjct: 302 RTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIA 361

Query: 226 LFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDM 283
           LF EMV    ++PN VT + V++AC+    +  G    A + D+ G+  +A     +VD+
Sbjct: 362 LFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDL 421

Query: 284 YMKCGAVDTAKQL 296
             + G VD A  L
Sbjct: 422 LGRAGLVDEALDL 434



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 21/226 (9%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           +G+L+    + E+ +      + G G+     S +V   A+ G  +    A K F Y ++
Sbjct: 287 LGALRRAAWVQEIAE------RTGFGNNVVVGSGLVDMYAKCGLIDE---ASKVF-YGMQ 336

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAF 154
           +      ++ Y+S+I G +  G   EAI+L+ E+     + P+  TF  VL AC+ +   
Sbjct: 337 EK----NVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMV 392

Query: 155 GEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLIC 212
           GEG      +  K G         C+++  G  G + +   +   MS   +   W +L+ 
Sbjct: 393 GEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLG 452

Query: 213 AC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           AC    + ++ K      F++  E I  N V +  ++++  K + +
Sbjct: 453 ACRIHGKSEIAKVVAEHLFKLEPESIG-NYVLLSNILASAGKWEEV 497


>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g66520-like [Glycine max]
          Length = 622

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/609 (38%), Positives = 362/609 (59%), Gaps = 11/609 (1%)

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
           +V +I +C  +Q ++   +  A +    + ++ +  N L+ +   C ++  A +LF +  
Sbjct: 19  LVSLIDSCKSMQQIK---QTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFDQIP 74

Query: 302 DRNLVLCNT-IMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCG 359
             +L + NT I ++ +       +L +   +    G  P+R + + A SA      +  G
Sbjct: 75  QPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEG 134

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
                + ++ GLE    + N +I MY K G    + ++F    ++ + SWN+LIA  + +
Sbjct: 135 EQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGS 194

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           G++  A+E+F  M  RD +SW+T++ G  Q   F EA++ F  ML    K +  T+V   
Sbjct: 195 GNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSAL 254

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDV 538
           +AC  L ALD  KWI+AYI K  I  + +L  +++DM+A+CG+ + A +VF   + K+ V
Sbjct: 255 AACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKV 314

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
             W A IG  AM G   +A+ +F +M  + I P+ + F+ +L ACSHG +V +G   FR 
Sbjct: 315 WLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRL 374

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M   + ++P+I HYGCMVDLL R+GLL EA D+I SMP+ P+  IWG+LL AC+ +++++
Sbjct: 375 MVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDME 434

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE--QGIRKLPGSSSIE 716
                   I  +DP   G HVLLSNIY+++G+W N AR+  +  E  +  +K+PG SSIE
Sbjct: 435 RGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRW-NEARILREKNEISRDRKKIPGCSSIE 493

Query: 717 VNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV-DEQEKKYLLSH 775
           + G  H+F  GD+SHP+   I S L EM  +L+ AGYVP+L  +L D+ DE++K+  LS 
Sbjct: 494 LKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPELGELLHDIDDEEDKETALSV 553

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSEKLA+AFGL++T+   PIR+VKNLR+C DCH   K +SKVY+R IIVRD  R+H F  
Sbjct: 554 HSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHHFED 613

Query: 836 GSCSCSDFW 844
           G CSC D+W
Sbjct: 614 GICSCKDYW 622



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 217/454 (47%), Gaps = 61/454 (13%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           + +CK++ ++KQ H  ++   L   P   +K++    ++    SL+YA K FD   + + 
Sbjct: 23  IDSCKSMQQIKQTHAQLITTALISHPVSANKLL----KLAACASLSYAHKLFDQIPQPD- 77

Query: 99  TSATLFMYNSLIRGYS-----CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
               LF+YN++I+ +S     C    +   SL  +L   G+ P++++F F  +AC     
Sbjct: 78  ----LFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDL---GLFPNRYSFVFAFSACGNGLG 130

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF----------------- 196
             EG QV    VK+G + +VFV N LI  YG+ G + + ++VF                 
Sbjct: 131 VQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAA 190

Query: 197 --------------DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
                         D M ER+VVSW+++I    +     EA+  F +M++ G KPN  T+
Sbjct: 191 YVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTL 250

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           V  ++AC+ L  L+ G  + AYI +  +K N  ++ +++DMY KCG +++A ++F E K 
Sbjct: 251 VSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKV 310

Query: 303 RNLV-LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA-----QLGDL 356
           +  V L N ++  +   G+  EA+ + ++M +    P++VT ++ ++A +     + G L
Sbjct: 311 KQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKL 370

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
               M   Y +   +E +      M+D+  + G  + A  +   M     V  W +L+  
Sbjct: 371 YFRLMVSDYAITPEIEHY----GCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNA 426

Query: 416 LIKNGDVESAREVFSEMPGRD--HISWNTMLGGL 447
                D+E    +   + G D  HI  + +L  +
Sbjct: 427 CRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNI 460


>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
 gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
          Length = 951

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/513 (43%), Positives = 329/513 (64%), Gaps = 8/513 (1%)

Query: 319 GLAREALAI-LDEMLL---HGPRPDRVTML--SAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           G AR  LA+ L   LL   H P P  +  L  S   + A  G        H + ++ GL 
Sbjct: 183 GSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHAHAVKLGLA 242

Query: 373 GWDSICNTMIDMYMKC-GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           G+  + N +I ++    G+   A  +    ++    ++N+LI    + G V  AR +F E
Sbjct: 243 GFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDE 302

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           MP R+ +SW+ M+ G  Q     EA+ LF  M ++ ++ D   +VGV +AC  LG L+  
Sbjct: 303 MPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQG 362

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           KW++ Y++ N I   + L TALVDM+A+CG+ Q AM+VF+ M++++V AWT  I  +AM 
Sbjct: 363 KWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMH 422

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G G +A+ELF++M R G+KPD I F+G L AC+H GLV++G  LF SM   +G+ P+I H
Sbjct: 423 GRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEH 482

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           YGCMVDLL R GLL EA ++++ MP++P+ +IWG+L+A C+ H+NV++A Y  +   EL+
Sbjct: 483 YGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELE 542

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           P+KSG +VLL NIYA++G+  +   +R  M+E+G+ K PG S++E+ G +H+F  GD SH
Sbjct: 543 PDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSH 602

Query: 732 PEMNNISSMLREMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           P +  I S   E++ R+R + GYVPD   VLLD++E+EK+  LS HSEK+A+AF LI+TS
Sbjct: 603 PFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTS 662

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
             MPIR+VKNLR+C DCH   KL+SKV+D  ++
Sbjct: 663 DDMPIRIVKNLRVCHDCHHVTKLISKVFDLTVV 695



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 161/366 (43%), Gaps = 46/366 (12%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF----GEGVQV 160
           ++N+LIR  +       A+ LY  L   G  P   T P +L +   S A     G  + V
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAV 232

Query: 161 HGAIVKMGFDRDVFVENCLINF--------------------------------YGECGD 188
           H   VK+G    + V N LI                                  Y   G 
Sbjct: 233 HAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGR 292

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + D R +FDEM  RN VSW++++    +    +EA+ LF  M  +G++P+   +V V++A
Sbjct: 293 VTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAA 352

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA+L  LE G  V  Y+    ++    +  ALVDMY KCG +  A ++F   K++N++  
Sbjct: 353 CAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAW 412

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCH 363
            T++      G   EAL +  +M   G +PD +  + A+ A    G +  GR     M  
Sbjct: 413 TTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVR 472

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDV 422
            Y ++  +E +      M+D+  + G    A  + + M  K   + W +L+AG   + +V
Sbjct: 473 KYGIKPKIEHY----GCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNV 528

Query: 423 ESAREV 428
           E A  V
Sbjct: 529 ELAEYV 534



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 38/317 (11%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +A   N L+  Y + G V  A+ LF E   RN V  + +++ YV+ G  REAL +   M 
Sbjct: 276 DASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQ 335

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G RPD   ++  ++A AQLG L  G+  HGY+  N +     +   ++DMY KCG+ +
Sbjct: 336 ADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQ 395

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +A  +F  M  K V++W ++I GL  +G    A E+FS+M           LG       
Sbjct: 396 LAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQM---------ERLG------- 439

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLAT 511
                          +K D +  +G   AC + G +D  + ++ + + K GI   ++   
Sbjct: 440 ---------------VKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYG 484

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            +VD+ AR G    A ++  +M  K D   W A +       N E A  +    +   ++
Sbjct: 485 CMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIE--LE 542

Query: 571 PD---SIVFVGVLTACS 584
           PD   + V +G + A S
Sbjct: 543 PDKSGAYVLLGNIYAAS 559



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 6/215 (2%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           +T A+  FD     N  S     +++++ GY   G G EA+ L+  +   G+ PD     
Sbjct: 293 VTDARALFDEMPARNAVS-----WSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLV 347

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL AC +     +G  VHG +        VF+   L++ Y +CG++     VF  M E+
Sbjct: 348 GVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEK 407

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           NV++WT++I   A      EA+ LF +M   G+KP+ +  +  + AC     ++ G  + 
Sbjct: 408 NVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELF 467

Query: 263 -AYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            + + + G+K        +VD+  + G ++ A+++
Sbjct: 468 DSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREM 502


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 258/761 (33%), Positives = 401/761 (52%), Gaps = 38/761 (4%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD   + N      F ++ L+  Y    +  EA+ +Y E+    I  D +T   VL
Sbjct: 21  ARQVFDRIKQRNA-----FSWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVL 75

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNV 204
            ACTK     EG  V     ++GF++DV V   LI+ + +CG + +   VF  M   R++
Sbjct: 76  AACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDI 135

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +S T++I A  R      A+  +++M  +G++P++ T   ++ AC+    L  G  +  +
Sbjct: 136 ISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKH 195

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           I E     N  + NAL+ MY KCG++  +K LF     +++V  N +++ Y   G  ++A
Sbjct: 196 ILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDA 255

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
            ++   M   G  PD  T  S + A A    L  GRM H  +   G +   ++ N +I M
Sbjct: 256 FSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISM 315

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           + +CG  E A R F  +  K + +W                               NTML
Sbjct: 316 FTRCGSLESARRYFYSIEKKELGAW-------------------------------NTML 344

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
               Q +  ++A+ L++ ML E    DR T   V  +C  LGAL   K+I+      G  
Sbjct: 345 AAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFE 404

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            D+ L TALV+M+A+CG    A + F  +  +DV +W+A I A A  G+ E+A+EL + M
Sbjct: 405 KDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLM 464

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
             QGI  + +    VL ACSHGG + +G   F  ++   G+     +    +DLLGRAG 
Sbjct: 465 NLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGW 524

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA  ++ +MP + + V   +LL  C+ H +V       +RI  L+PE  G +VLL+N+
Sbjct: 525 LKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNM 584

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YA+AG+W +VA++R  M+++G+++  G SSIE   K++EF+ GD S+P    I + L  +
Sbjct: 585 YAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERL 644

Query: 745 NCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
             R++ + GYVPD  +V  DV + +K+ LL  HSEK+AM FGLI++     +R++KNLR+
Sbjct: 645 YSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRV 704

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH+  KL SK+  R IIVRD  RFH F  G CSC D+W
Sbjct: 705 CSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 227/491 (46%), Gaps = 36/491 (7%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           D F+ N +I  YG+C    D R+VFD + +RN  SW+ L+    +  + +EA+ ++ EMV
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            + I  ++ T+  V++AC KL ++E G  V    +ELG + + ++  +L+ ++ KCG ++
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 292 TAKQLFGECKD-RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
            A+ +F      R+++    ++  YVR G    AL    +M   G  PD  T  + + A 
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           +    LL G+  H ++L +   G  S+ N +I MY KCG  + +  +F  M  K VVSWN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++IA     G  + A  +F  M    H                                 
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTP------------------------------- 269

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           D  T   +  AC     L+  + ++  I   G   D  +   L+ MF RCG  + A + F
Sbjct: 270 DIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYF 329

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
             +EK+++ AW   + A A    G+ A+ L+  ML +G  PD   F  V+ +C+  G + 
Sbjct: 330 YSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALR 389

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLA 649
           +G  +    T   G    ++    +V++  + G L +A        +   DV+ W +++A
Sbjct: 390 EGKFIHECSTSC-GFEKDVILGTALVNMYAKCGSLADAKKSFDG--ISNKDVVSWSAMIA 446

Query: 650 ACQKHQNVDIA 660
           A  +H + + A
Sbjct: 447 ASAQHGHAEEA 457


>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
          Length = 983

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/513 (43%), Positives = 329/513 (64%), Gaps = 8/513 (1%)

Query: 319 GLAREALAI-LDEMLL---HGPRPDRVTML--SAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           G AR  LA+ L   LL   H P P  +  L  S   + A  G        H + ++ GL 
Sbjct: 183 GSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHAHAVKLGLA 242

Query: 373 GWDSICNTMIDMYMKC-GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           G+  + N +I ++    G+   A  +    ++    ++N+LI    + G V  AR +F E
Sbjct: 243 GFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDE 302

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           MP R+ +SW+ M+ G  Q     EA+ LF  M ++ ++ D   +VGV +AC  LG L+  
Sbjct: 303 MPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQG 362

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           KW++ Y++ N I   + L TALVDM+A+CG+ Q AM+VF+ M++++V AWT  I  +AM 
Sbjct: 363 KWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMH 422

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G G +A+ELF++M R G+KPD I F+G L AC+H GLV++G  LF SM   +G+ P+I H
Sbjct: 423 GRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEH 482

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           YGCMVDLL R GLL EA ++++ MP++P+ +IWG+L+A C+ H+NV++A Y  +   EL+
Sbjct: 483 YGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELE 542

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           P+KSG +VLL NIYA++G+  +   +R  M+E+G+ K PG S++E+ G +H+F  GD SH
Sbjct: 543 PDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSH 602

Query: 732 PEMNNISSMLREMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           P +  I S   E++ R+R + GYVPD   VLLD++E+EK+  LS HSEK+A+AF LI+TS
Sbjct: 603 PFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTS 662

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
             MPIR+VKNLR+C DCH   KL+SKV+D  ++
Sbjct: 663 DDMPIRIVKNLRVCHDCHHVTKLISKVFDLTVV 695



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 161/366 (43%), Gaps = 46/366 (12%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF----GEGVQV 160
           ++N+LIR  +       A+ LY  L   G  P   T P +L +   S A     G  + V
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAV 232

Query: 161 HGAIVKMGFDRDVFVENCLINF--------------------------------YGECGD 188
           H   VK+G    + V N LI                                  Y   G 
Sbjct: 233 HAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGR 292

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + D R +FDEM  RN VSW++++    +    +EA+ LF  M  +G++P+   +V V++A
Sbjct: 293 VTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAA 352

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA+L  LE G  V  Y+    ++    +  ALVDMY KCG +  A ++F   K++N++  
Sbjct: 353 CAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAW 412

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCH 363
            T++      G   EAL +  +M   G +PD +  + A+ A    G +  GR     M  
Sbjct: 413 TTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVR 472

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDV 422
            Y ++  +E +      M+D+  + G    A  + + M  K   + W +L+AG   + +V
Sbjct: 473 KYGIKPKIEHY----GCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNV 528

Query: 423 ESAREV 428
           E A  V
Sbjct: 529 ELAEYV 534



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 38/317 (11%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +A   N L+  Y + G V  A+ LF E   RN V  + +++ YV+ G  REAL +   M 
Sbjct: 276 DASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQ 335

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G RPD   ++  ++A AQLG L  G+  HGY+  N +     +   ++DMY KCG+ +
Sbjct: 336 ADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQ 395

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +A  +F  M  K V++W ++I GL  +G    A E+FS+M           LG       
Sbjct: 396 LAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQM---------ERLG------- 439

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLAT 511
                          +K D +  +G   AC + G +D  + ++ + + K GI   ++   
Sbjct: 440 ---------------VKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYG 484

Query: 512 ALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
            +VD+ AR G    A ++  +M  K D   W A +       N E A  +    +   ++
Sbjct: 485 CMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIE--LE 542

Query: 571 PD---SIVFVGVLTACS 584
           PD   + V +G + A S
Sbjct: 543 PDKSGAYVLLGNIYAAS 559



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 9/233 (3%)

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           S  + ++   A+ G    +T A+  FD     N  S     +++++ GY   G G EA+ 
Sbjct: 278 STFNTLITAYARAG---RVTDARALFDEMPARNAVS-----WSAMVNGYVQAGDGREALG 329

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L+  +   G+ PD      VL AC +     +G  VHG +        VF+   L++ Y 
Sbjct: 330 LFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYA 389

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG++     VF  M E+NV++WT++I   A      EA+ LF +M   G+KP+ +  + 
Sbjct: 390 KCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIG 449

Query: 245 VISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            + AC     ++ G  +  + + + G+K        +VD+  + G ++ A+++
Sbjct: 450 ALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREM 502


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 256/791 (32%), Positives = 422/791 (53%), Gaps = 43/791 (5%)

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
           ++K GL    S  + ++   +  G  +S+  A   FD  +K+ +T +    +NS+I    
Sbjct: 186 VIKSGLDTTVSVANSLI---SMFGNCDSIEEASCVFDD-MKERDTIS----WNSIITASV 237

Query: 115 CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF 174
             G   +++  + ++       D  T   +L  C  +     G  +HG +VK G + +V 
Sbjct: 238 HNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVC 297

Query: 175 VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           V N L++ Y + G   D   VF +M ER+++SW S++ +         A+ L  EM++  
Sbjct: 298 VCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTR 357

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
              N VT    +SAC  L+ L++   V A++  LG+  N ++ NALV MY K G++  A+
Sbjct: 358 KATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQ 414

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           ++     DR+ V  N ++  +        A+   + +   G   + +T+++ +SA     
Sbjct: 415 RVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPD 474

Query: 355 DLL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
           DLL  G   H +++  G E    + +++I MY +CG                        
Sbjct: 475 DLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCG------------------------ 510

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
                  D+ ++  +F  +  ++  +WN +L         EEA++L   M ++ I +D+ 
Sbjct: 511 -------DLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQF 563

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           +     +  G L  LD  + +++ I K+G   +  +  A +DM+ +CG+     ++  + 
Sbjct: 564 SFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQP 623

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
             R   +W   I A+A  G  +QA E F+EML  G++PD + FV +L+ACSHGGLV++G 
Sbjct: 624 RSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGL 683

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
             F SM+   GV   I H  C++DLLGRAG L EA + I  MPV P D++W SLLAAC+ 
Sbjct: 684 AYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKI 743

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H N+++A  AA+R+ ELD      +VL SN+ AS  +W +V  VR QM+   I+K P  S
Sbjct: 744 HGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACS 803

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            +++  +V  F  GD+ HP+   I + L E+   +R+AGY+PD +  L D DE++K++ L
Sbjct: 804 WVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNL 863

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
            +HSE++A+AFGLI++S+  P+R+ KNLR+C DCHS  K+VS++  R+II+RD  RFH F
Sbjct: 864 WNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHF 923

Query: 834 RQGSCSCSDFW 844
             G CSCSD+W
Sbjct: 924 SSGKCSCSDYW 934



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 270/573 (47%), Gaps = 43/573 (7%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F S+ +AQ  FD   + NE S     +N+L+ G+  +G   +A+  +  +   G+ P  +
Sbjct: 5   FGSIEHAQHVFDKMPERNEAS-----WNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59

Query: 140 TFPFVLNACTKSSAFGEGV-QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
               ++ AC +S    EG  QVH  ++K G   DVFV   L++FYG  G + +   VF E
Sbjct: 60  VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           + E N+VSWTSL+   A     KE + ++  +  +G+  N   M  VI +C  L +  LG
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            +V   + + G+     + N+L+ M+  C +++ A  +F + K+R+ +  N+I++  V  
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G   ++L    +M     + D +T+ + +       +L  GR  HG V+++GLE    +C
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N+++ MY + GK E A  +F  M  + ++SWNS++A  + NG+                 
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGN----------------- 342

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                         +  A+EL   ML  R   + VT     SAC  L  L   K ++A++
Sbjct: 343 --------------YPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFV 385

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
              G+H ++ +  ALV M+ + G    A +V + M  RD   W A IG  A       A+
Sbjct: 386 ILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAI 445

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTA-CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           E FN +  +G+  + I  V +L+A  S   L++ G  +   +  + G   +      ++ 
Sbjct: 446 EAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIV-VAGFELETFVQSSLIT 504

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +  + G L  + + I  +    N   W ++L+A
Sbjct: 505 MYAQCGDLNTS-NYIFDVLANKNSSTWNAILSA 536



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/608 (25%), Positives = 281/608 (46%), Gaps = 49/608 (8%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H H++K GL         V    + +  + +  +  +  D   K+ E    +  + SL
Sbjct: 80  QVHAHVIKCGLA------CDVFVGTSLLHFYGTFGWVAEV-DMVFKEIE-EPNIVSWTSL 131

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           + GY+  G   E +S+Y  L   G+  ++     V+ +C        G QV G+++K G 
Sbjct: 132 MVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGL 191

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           D  V V N LI+ +G C  I +   VFD+M ER+ +SW S+I A       ++++  F +
Sbjct: 192 DTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQ 251

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M     K + +T+  ++  C   QNL  G  +   + + G+++N  + N+L+ MY + G 
Sbjct: 252 MRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGK 311

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
            + A+ +F + ++R+L+  N++M+++V  G    AL +L EML      + VT  +A+SA
Sbjct: 312 SEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSA 371

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
              L  L   ++ H +V+  GL     I N ++ MY K G    A R+   M ++  V+W
Sbjct: 372 CYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTW 428

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           N+LI G   N +  +                               A+E F ++  E + 
Sbjct: 429 NALIGGHADNKEPNA-------------------------------AIEAFNLLREEGVP 457

Query: 470 VDRVTMVGVASACGYLGA---LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
           V+ +T+V + SA  +L     LD    I+A+I   G   +  + ++L+ M+A+CGD   +
Sbjct: 458 VNYITIVNLLSA--FLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTS 515

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
             +F  +  ++ S W A + A A  G GE+A++L  +M   GI  D   F        + 
Sbjct: 516 NYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNL 575

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
            L+++G  L  S+   HG           +D+ G+ G + +   ++   P   +   W  
Sbjct: 576 TLLDEGQQL-HSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQ-PRSRSQRSWNI 633

Query: 647 LLAACQKH 654
           L++A  +H
Sbjct: 634 LISALARH 641



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 223/483 (46%), Gaps = 39/483 (8%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y + G I   + VFD+M ERN  SW +L+    R    ++A+  F  M+E G++P+S   
Sbjct: 2   YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61

Query: 243 VCVISACAKLQNLELGD-RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
             +++AC +   +  G  +V A++ + G+  +  +  +L+  Y   G V     +F E +
Sbjct: 62  ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           + N+V   ++M  Y   G  +E +++   +   G   +   M + + +   L D + G  
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
             G V+++GL+   S+ N++I M+  C   E A  +FD M  +  +SWNS+I   + NG 
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
            E + E FS+M                                    K D +T+  +   
Sbjct: 242 CEKSLEYFSQMR-------------------------------YTHAKTDYITISALLPV 270

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           CG    L   + ++  + K+G+  ++ +  +L+ M+++ G  + A  VF +M +RD+ +W
Sbjct: 271 CGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISW 330

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            + + +    GN  +A+EL  EML+     + + F   L+AC +   +     +  +   
Sbjct: 331 NSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLK----IVHAFVI 386

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA--ACQKHQNVDI 659
           + G+   ++    +V + G+ G +  A  + K MP + ++V W +L+   A  K  N  I
Sbjct: 387 LLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMP-DRDEVTWNALIGGHADNKEPNAAI 445

Query: 660 AAY 662
            A+
Sbjct: 446 EAF 448



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 158/370 (42%), Gaps = 36/370 (9%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K G+++ A+ +F +  +RN    N +MS +VR+G  ++A+     ML HG RP    
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 343 MLSAVSASAQLGDLLCGRM-CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
             S V+A  + G +  G    H +V++ GL     +  +++  Y   G       +F  +
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
               +VSW SL+ G   NG V                               +E M ++R
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCV-------------------------------KEVMSVYR 149

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            +  + +  +   M  V  +CG L    L   +   + K+G+   + +A +L+ MF  C 
Sbjct: 150 RLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCD 209

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             + A  VF  M++RD  +W + I A    G+ E+++E F++M     K D I    +L 
Sbjct: 210 SIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLP 269

Query: 582 ACSHGGLVNQGW-HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
            C  G   N  W      M    G+   +     ++ +  +AG   +A  +   M  E +
Sbjct: 270 VC--GSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMR-ERD 326

Query: 641 DVIWGSLLAA 650
            + W S++A+
Sbjct: 327 LISWNSMMAS 336


>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
          Length = 625

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/490 (43%), Positives = 315/490 (64%), Gaps = 7/490 (1%)

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV--VSWNSLIAGLIK 418
           + HG  L++G      + N ++ +Y   G    A R+FD     ++   SWN++++G  K
Sbjct: 137 LAHGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGK 196

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
            GD+E+AREVF  MP R  +SW+ M+    +   F EA+ +F  M+    + D V +  V
Sbjct: 197 CGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSV 256

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHC---DMQLATALVDMFARCGDPQRAMQVFRRMEK 535
             AC +LGAL+  +W++ +++  G+     ++ L TALVDM+ +CG    A  VF  ++ 
Sbjct: 257 LKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQS 316

Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL 595
           +DV  W A IG +AM G+G++A+ELF  ML  G  P+   FV VL AC+H G V++G  +
Sbjct: 317 QDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEI 376

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
           FRSM D HG+ P+  HYGC+ DLLGRAGLL EA  ++  MP+EP+   WG+L+++C  H 
Sbjct: 377 FRSMCD-HGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHN 435

Query: 656 NVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
           NV +     +++ EL+P+  G +V+L N+YA  G W +   +R  M+E+G +K  G S I
Sbjct: 436 NVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFI 495

Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK-YLLS 774
           E NG VHEF SGD  HP+   I ++L +M  RL+  GYV D + VL+D+D++E K   LS
Sbjct: 496 EWNGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIGYVKDTSQVLMDMDDEEDKGNTLS 555

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSE+LA+AFG+++T + MPIR+VKNLR+C DCH +AKLVSK+Y REII+RD +RFH FR
Sbjct: 556 YHSERLALAFGILNTPRHMPIRIVKNLRVCRDCHVYAKLVSKLYQREIIMRDRHRFHLFR 615

Query: 835 QGSCSCSDFW 844
            G CSC+DFW
Sbjct: 616 GGVCSCNDFW 625



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 146/303 (48%), Gaps = 8/303 (2%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           D F  N +++ YG+CGD+   R VF  M ER +VSW+++I AC R     EA+ +F +M+
Sbjct: 183 DAFSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMM 242

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM---KANALMVNALVDMYMKCG 288
             G +P++V +  V+ ACA L  LE G  V  ++   G+     N ++  ALVDMY KCG
Sbjct: 243 GNGFRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCG 302

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +D A  +F   + +++VL N ++      G  + AL +   ML  G  P+  T +  + 
Sbjct: 303 CMDEAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLC 362

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A    G +  G+     +  +G+E        + D+  + G  E A  +   M  +   S
Sbjct: 363 ACTHTGRVDEGKEIFRSMCDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHAS 422

Query: 409 -WNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            W +L++  + + +V   E   +   E+   D   +  +        ++E+A  L R M+
Sbjct: 423 QWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKAL-RKMM 481

Query: 465 SER 467
            ER
Sbjct: 482 EER 484



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 117/290 (40%), Gaps = 40/290 (13%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C  L      H   LK G    P   + ++     +G    L+ A++ FD       TS 
Sbjct: 129 CDRLAAAGLAHGQALKHGALAHPVVTNCLLKLYCALGM---LSDARRVFD---TSGATSL 182

Query: 102 TLFMYNSLIRGY-----------------------------SCIGLG--VEAISLYVELA 130
             F +N+++ GY                             +CI  G   EA+ ++ ++ 
Sbjct: 183 DAFSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMM 242

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR---DVFVENCLINFYGECG 187
           G G  PD      VL AC    A   G  VH  +   G  R   +V +E  L++ Y +CG
Sbjct: 243 GNGFRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCG 302

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            + +   VFD +  ++VV W ++I   A     K A+ LF  M++ G  PN  T V V+ 
Sbjct: 303 CMDEAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLC 362

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           AC     ++ G  +   + + G++        L D+  + G ++ A+ + 
Sbjct: 363 ACTHTGRVDEGKEIFRSMCDHGIEPRREHYGCLADLLGRAGLLEEAEAVL 412



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKP------SYISKVVCTCAQMGTFESLTYAQKA 89
           LK C  L  L++    H  +  +GLG  P      + +  + C C  M            
Sbjct: 257 LKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDE---------- 306

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
             +++ D   S  + ++N++I G +  G G  A+ L+  +   G +P++ TF  VL ACT
Sbjct: 307 -AWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACT 365

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWT 208
            +    EG ++  ++   G +       CL +  G  G + +   V  +M  E +   W 
Sbjct: 366 HTGRVDEGKEIFRSMCDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWG 425

Query: 209 SLICAC 214
           +L+ +C
Sbjct: 426 ALMSSC 431


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/750 (33%), Positives = 384/750 (51%), Gaps = 96/750 (12%)

Query: 160 VHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           VH  I++ +      ++ N L+  Y   G +   RRVFD M  RN+V+  SL+ A AR  
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 219 LPKEAVYLFFEMV---------------------------------EEGIKPNSVTMVCV 245
           L ++   LF  +                                  E G++P+ +TM  V
Sbjct: 92  LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           +   + L +  LG +V   I  LG  A A   + LVDMY K G +  A+++F E + +N+
Sbjct: 152 VMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNV 211

Query: 306 VLCNTIMSNYVRL-------------------------------GLAREALAILDEMLLH 334
           V+CNT+++  +R                                GL  EAL +   M   
Sbjct: 212 VMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAE 271

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G   D+ T  S ++A   L  L  G+  H Y+ R   E    + + ++DMY KC      
Sbjct: 272 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRS---- 327

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                                      V  A  VF  M  ++ ISW  M+ G  Q    E
Sbjct: 328 ---------------------------VRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGE 360

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           EA+ +F  M  + IK D  T+  V S+C  L +L+     +     +G+   + ++ ALV
Sbjct: 361 EAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALV 420

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            ++ +CG  + A ++F  M   D  +WTA +   A  G  ++ ++LF +ML +G+KPD +
Sbjct: 421 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGV 480

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+GVL+ACS  GLV++G   F SM   H + P   HY CM+DL  R+G L +A + IK 
Sbjct: 481 TFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQ 540

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP  P+   W +LL+AC+   +++I  +AAE + +LDP+    +VLL +++AS G+W +V
Sbjct: 541 MPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDV 600

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           A++R  M+++ ++K PG S I+   KVH F++ D+SHP    I   L+ +N ++ + GY 
Sbjct: 601 AKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYK 660

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           PD+++VL DV + EK ++LSHHSEKLA+AFGLI     MPIR+VKNLR+C DCH+  K +
Sbjct: 661 PDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFI 720

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SK+  R+I+VRD  RFH F  G CSC DFW
Sbjct: 721 SKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 223/487 (45%), Gaps = 70/487 (14%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAG--FGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           YN+L+ G+S  G    A   YV L     G+ P + T   V+   +       G QVH  
Sbjct: 111 YNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQ 170

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV------------------ 205
           I+++GF    F  + L++ Y + G I D RRVFDEM  +NVV                  
Sbjct: 171 ILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEA 230

Query: 206 -------------SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
                        +WT+++    +  L  EA+ +F  M  EG+  +  T   +++AC  L
Sbjct: 231 RALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGAL 290

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             LE G ++ AYI     + N  + +ALVDMY KC +V  A+ +F     +N++    ++
Sbjct: 291 AALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMI 350

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
             Y + G   EA+ +  EM   G +PD  T+ S +S+ A L  L  G   H   L +GL 
Sbjct: 351 VGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLR 410

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            + ++ N ++ +Y KCG  E A R+FD MS    VSW +L+ G  + G            
Sbjct: 411 PYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKA---------- 460

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                                +E ++LF  MLS+ +K D VT +GV SAC   G +D  +
Sbjct: 461 ---------------------KETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGR 499

Query: 493 WIYAYIEKNGIHCDMQL---ATALVDMFARCGDPQRAMQVFRRMEK-RDVSAWTAAIGAM 548
             +  ++++  H  + L    T ++D+++R G  ++A +  ++M +  D   W   + A 
Sbjct: 500 SYFHSMQQD--HDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSAC 557

Query: 549 AMEGNGE 555
            + G+ E
Sbjct: 558 RLRGDME 564



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 191/403 (47%), Gaps = 31/403 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN----------- 97
           +Q HC IL+ G G      S +V   A++G       A++ FD     N           
Sbjct: 165 RQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGD---ARRVFDEMEGKNVVMCNTMITGL 221

Query: 98  ------ETSATLF---------MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
                   +  LF          + +++ G +  GL  EA+ ++  +   G+  D++TF 
Sbjct: 222 LRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFG 281

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +L AC   +A  EG Q+H  I +  ++ +VFV + L++ Y +C  +     VF  M  +
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWK 341

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N++SWT++I    +    +EAV +F EM  +GIKP+  T+  VIS+CA L +LE G +  
Sbjct: 342 NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFH 401

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                 G++    + NALV +Y KCG+++ A +LF E    + V    ++  Y + G A+
Sbjct: 402 CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAK 461

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-MCHGYVLRNGLEGWDSICNTM 381
           E + + ++ML  G +PD VT +  +SA ++ G +  GR   H     + +   D     M
Sbjct: 462 ETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCM 521

Query: 382 IDMYMKCGKQEMACRIFDHMSN-KTVVSWNSLIAGLIKNGDVE 423
           ID+Y + G  + A      M        W +L++     GD+E
Sbjct: 522 IDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDME 564


>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
          Length = 616

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/484 (42%), Positives = 303/484 (62%), Gaps = 2/484 (0%)

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H ++ + G        N++I+ Y   G  + A  +FD +     VSWNS+I G +K G++
Sbjct: 133 HAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEM 192

Query: 423 ESAREVFSEMPGRDH-ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           + A  +F +MP +++ ISW TM+ G  Q  M +EA++LF  M +  +  D V++    SA
Sbjct: 193 DMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSA 252

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  LGAL+  KWI++Y  K     D  L   L+DM+A+CG+ + A+ VF+ M+ + V  W
Sbjct: 253 CSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVW 312

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           TA I   A  G G +A+  F EM   G+KP++I F  VLTACS+ GLV +G  +F ++  
Sbjct: 313 TALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIER 372

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            + + P I HYGCMVDLLGRAGLL EA   I+ MP++PN VIWGSLL ACQ H+N+++  
Sbjct: 373 DYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGE 432

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
              E + E+D    G +V ++NI+A   KW   A  R  M+EQG+ K+PG S+I + G  
Sbjct: 433 KIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTT 492

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD-VDEQEKKYLLSHHSEKL 780
           HEF +GD SH E+  I +  R +  +L + GYVP+L ++LLD VD++EK+ ++  HSEKL
Sbjct: 493 HEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKL 552

Query: 781 AMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSC 840
           A+ +GL+ T     IR++KNLR+C DCH    L+SK+Y R+I++RD  RFH F+ G CSC
Sbjct: 553 AITYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSC 612

Query: 841 SDFW 844
            D+W
Sbjct: 613 GDYW 616



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 198/428 (46%), Gaps = 41/428 (9%)

Query: 35  SIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           ++  L+ C T  ELKQ H  +LK GL   P  ++K +   +   +    +YA   F    
Sbjct: 14  NLSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFL---SFCLSSSFSSYAHDVFFNGF 70

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
              +T    F++N +IRG SC      ++ LY  +       + +TFPF+L AC+  SAF
Sbjct: 71  DRPDT----FLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAF 126

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE------------- 201
            E  Q+H  I K G+  D++  N LIN Y   G+      +FD + E             
Sbjct: 127 QETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGY 186

Query: 202 -------------------RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
                               N +SWT++I    +  + KEA+ LF EM    + P++V++
Sbjct: 187 VKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSL 246

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
              +SAC++L  LE G  + +Y ++   + ++++   L+DMY KCG ++ A  +F   K 
Sbjct: 247 ASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKT 306

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           +++ +   ++S Y   GL REA++   EM   G +P+ +T  + ++A +  G +  G+  
Sbjct: 307 KSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSV 366

Query: 363 HGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNG 420
              + R+  L+        M+D+  + G    A R    M  K   V W SL+     + 
Sbjct: 367 FNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHK 426

Query: 421 DVESAREV 428
           ++E   ++
Sbjct: 427 NIELGEKI 434



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 195/464 (42%), Gaps = 69/464 (14%)

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           F F   L+   K     E  Q+H  ++K G  +D +     ++F            VF  
Sbjct: 9   FAFEHNLSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFN 68

Query: 199 MSER-NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
             +R +   W  +I   +  D P  ++ L+  M+      N+ T   ++ AC+ L   + 
Sbjct: 69  GFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQE 128

Query: 258 GDRVCAYIDELGMKANALMVNALVDM-------------------------------YMK 286
             ++ A+I + G   +   VN+L++                                Y+K
Sbjct: 129 TTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVK 188

Query: 287 CGAVDTAKQLFGECKDRNLVLC-NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
            G +D A  LF +  ++N  +   T++S YV+ G+ +EAL +  EM      PD V++ S
Sbjct: 189 AGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLAS 248

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
           A+SA +QLG L  G+  H Y  +        +C  +IDMY KCG+ E A  +F +M  K+
Sbjct: 249 ALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKS 308

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V  W +LI+G   +G                       LG         EA+  F  M +
Sbjct: 309 VQVWTALISGYAYHG-----------------------LG--------REAISKFLEMQN 337

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQ 524
             +K + +T   V +AC Y G ++  K ++  IE++  +   ++    +VD+  R G   
Sbjct: 338 MGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLN 397

Query: 525 RAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
            A +  ++M  K +   W + + A  +  N   GE+  E+  EM
Sbjct: 398 EANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEM 441



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 43/267 (16%)

Query: 425 AREVFSEMPGR-DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
           A +VF     R D   WN M+ GL+  +  + ++ L+  ML      +  T   +  AC 
Sbjct: 62  AHDVFFNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACS 121

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA------------------------- 518
            L A      I+A+I K G   D+    +L++ +A                         
Sbjct: 122 NLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNS 181

Query: 519 ------RCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
                 + G+   A+ +FR+M EK +  +WT  I      G  ++A++LF+EM    + P
Sbjct: 182 VIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPP 241

Query: 572 DSIVFVGVLTACSHGGLVNQG-W-HLF--RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           D++     L+ACS  G + QG W H +  ++ T I  V   +     ++D+  + G + E
Sbjct: 242 DNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCV-----LIDMYAKCGEMEE 296

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKH 654
           AL + K+M  +   V W +L++    H
Sbjct: 297 ALGVFKNMKTKSVQV-WTALISGYAYH 322


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/614 (36%), Positives = 357/614 (58%), Gaps = 36/614 (5%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           ++P+      ++  C  L  L+ G  V  ++     + + ++ N+++ MY KCG+++ A+
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREA---LAILDEMLLHGPRPDRVTMLSAVSASA 351
           Q+F E   +++V   ++++ Y + G A  A   L +  EM+  G RP+   + S V    
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            LG  + G+  HG   + G +    + ++++DMY +CG                      
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCG---------------------- 244

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
                    ++  +R VF E+  ++ +SWN ++ G  ++   EEA+ LF  M  E     
Sbjct: 245 ---------ELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGAT 295

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
             T   +  +    G+L+  KW++A++ K+G      +   L+ M+A+ G+   A +VF 
Sbjct: 296 EFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFD 355

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGGLVN 590
           R+ K DV +  + +   A  G G++AVELF EM L   I+P+ I F+ VLTACSH GL++
Sbjct: 356 RLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLD 415

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G + F  M   +G+ P++ HY  +VDL GRAGLL +A   I+ MP+EPN  IWG+LL A
Sbjct: 416 EGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGA 474

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
            + H+N ++ AYAA+++ ELDP   G H LLSNIYASAG+W +VA+VR +MK+ G++K P
Sbjct: 475 SKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEP 534

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
             S +E+   VH F++ D SHP+ N +  M   +N ++++ GYVPD ++V + VD+QEK+
Sbjct: 535 ACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKE 594

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
             L +HSEKLA+AF L++T     IR++KN+R+C DCHS  K VS V  REIIVRD NRF
Sbjct: 595 LNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRF 654

Query: 831 HFFRQGSCSCSDFW 844
           H FR GSCSC D+W
Sbjct: 655 HHFRDGSCSCRDYW 668



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 204/424 (48%), Gaps = 34/424 (8%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD+  +  +L  CT      +G  VH  ++   F  D+ ++N ++  Y +CG +   R+V
Sbjct: 89  PDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQV 148

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEA---VYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           FDEM  ++VV+WTS+I   ++      A   + LF EMV +G++PN   +  ++  C  L
Sbjct: 149 FDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFL 208

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            +   G ++     + G + N  + ++LVDMY +CG +  ++ +F E + +N V  N ++
Sbjct: 209 GSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALI 268

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           S + R G   EAL +  +M   G      T  + + +S+  G L  G+  H +++++G +
Sbjct: 269 SGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKK 328

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + NT++ MY K G    A ++FD +    VVS NS++ G  ++G  + A E+F EM
Sbjct: 329 LVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEM 388

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                                         ML   I+ + +T + V +AC + G LD   
Sbjct: 389 ------------------------------MLWVEIEPNDITFLSVLTACSHAGLLDEGL 418

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAME 551
           + +  ++K G+   +   T +VD+F R G   +A      M  + + + W A +GA  M 
Sbjct: 419 YYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478

Query: 552 GNGE 555
            N E
Sbjct: 479 KNTE 482



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 195/388 (50%), Gaps = 22/388 (5%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY-I 94
           LK C  L +LKQ    H H++     +     + ++   A+ G   SL  A++ FD   +
Sbjct: 98  LKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCG---SLEIARQVFDEMCV 154

Query: 95  KDNETSATLFMYNSLIRGYSCIGLG---VEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           KD      +  + S+I GYS  G       A+ L++E+   G+ P++F    ++  C   
Sbjct: 155 KD------VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFL 208

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
            +  +G Q+HG   K GF  +VFV + L++ Y  CG++ + R VFDE+  +N VSW +LI
Sbjct: 209 GSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALI 268

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
              AR+   +EA+ LF +M  EG      T   ++ + +   +LE G  + A++ + G K
Sbjct: 269 SGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKK 328

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
               + N L+ MY K G +  AK++F      ++V CN+++  Y + GL +EA+ + +EM
Sbjct: 329 LVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEM 388

Query: 332 LLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           +L     P+ +T LS ++A +  G L  G      + + GLE   S   T++D++ + G 
Sbjct: 389 MLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGL 448

Query: 391 QEMACRIFDHM---SNKTVVSWNSLIAG 415
            + A    + M    N T+  W +L+  
Sbjct: 449 LDQAKSFIEEMPIEPNATI--WGALLGA 474



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 181/402 (45%), Gaps = 65/402 (16%)

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            L +LD +      PDR      +     LG L  G++ H +++ +       I N+++ 
Sbjct: 75  GLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG  E+A ++FD M  K VV+W S+I G  ++G   SA                  
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSAT----------------- 177

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
                       A+ LF  M+ + ++ +   +  +   CG+LG+    K I+    K G 
Sbjct: 178 -----------TALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGF 226

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             ++ + ++LVDM+ARCG+ + +  VF  +E ++  +W A I   A +G GE+A+ LF +
Sbjct: 227 QENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVK 286

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQG-W---HLFRSMTDIHG-VSPQIVH------- 611
           M R+G       +  +L + S  G + QG W   H+ +S   + G V   ++H       
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGN 346

Query: 612 ----------------YGCMVDLLGRA--GLLGEALDLIKSM----PVEPNDVIWGSLLA 649
                             C   L+G A  GL  EA++L + M     +EPND+ + S+L 
Sbjct: 347 ICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLT 406

Query: 650 ACQKHQNVDIAAYAAERITE--LDPEKSGVHVLLSNIYASAG 689
           AC     +D   Y  E + +  L+P+ S  +  + +++  AG
Sbjct: 407 ACSHAGLLDEGLYYFELMKKYGLEPKLSH-YTTVVDLFGRAG 447


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/641 (34%), Positives = 365/641 (56%), Gaps = 63/641 (9%)

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           KP++     +I +C K + L+ G +V  +I   G      ++N L++MY KC ++  +++
Sbjct: 67  KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQK 126

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM--------------LLHGPRPD-- 339
           LF E  +R+L   N ++S Y ++GL +EA ++ D+M               +   RP+  
Sbjct: 127 LFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEA 186

Query: 340 ----------------RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
                           + T+ SA++A+A +  L  G+  HGY++R GL+  + + + + D
Sbjct: 187 LELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSD 246

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG                                +E AR +F +M  RD ++W  M
Sbjct: 247 MYGKCGS-------------------------------IEEARHIFDKMVDRDIVTWTAM 275

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           +    Q+   +E  +LF  +L   I+ +  T  GV +AC    + +L K ++ Y+ + G 
Sbjct: 276 IDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGF 335

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
                 A+ALV M+++CG+   A +VF+   + D+ +WT+ I   A  G  ++A+  F  
Sbjct: 336 DPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFEL 395

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           +++ G +PD I FVGVL+AC+H GLV++G   F S+ + +G++    HY C++DLL R+G
Sbjct: 396 LVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSG 455

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
              EA ++I  M ++P+  +W SLL  C+ H N+ +A  AAE + E++PE    +V L+N
Sbjct: 456 QFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLAN 515

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           IYA+AG W+ VA++R  M ++G+ K PG S I +   VH F  GD+SHP+   I+  L +
Sbjct: 516 IYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGK 575

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           ++ R+++ G+VPD   VL DV++++K+  LS+HSEKLA+AFG+IST +  PI+V KNLR 
Sbjct: 576 LSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRT 635

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH+  K +SK+ +R+IIVRD+NRFHFF  G CSC D+W
Sbjct: 636 CVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 223/504 (44%), Gaps = 74/504 (14%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P    +  ++ +C KS    +G +VH  I   GF   +F+ N L+  Y +C  ++D +++
Sbjct: 68  PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKL 127

Query: 196 FDEMSERNV-------------------------------VSWTSLICACARRDLPKEAV 224
           FDEM ER++                                SWT++I    R D P EA+
Sbjct: 128 FDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEAL 187

Query: 225 YLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            LF  M   +  K N  T+   ++A A +  L +G  +  YI   G+ ++ ++ +AL DM
Sbjct: 188 ELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDM 247

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG+++ A+ +F +  DR++V    ++  Y + G  +E   +  ++L  G RP+  T 
Sbjct: 248 YGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTF 307

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
              ++A A       G+  HGY+ R G + +    + ++ MY KCG    A R+F     
Sbjct: 308 SGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQ 367

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
             + SW SLIAG  +NG                                 +EA+  F ++
Sbjct: 368 PDLFSWTSLIAGYAQNGQP-------------------------------DEAIRYFELL 396

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           +    + D +T VGV SAC + G +D    + ++  E+ G+         ++D+ AR G 
Sbjct: 397 VKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQ 456

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEMLRQGIKPDS-IVFV 577
              A  +  +M  K D   W + +G   + GN    ++A E   E     I+P++   +V
Sbjct: 457 FDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFE-----IEPENPATYV 511

Query: 578 GVLTACSHGGLVNQGWHLFRSMTD 601
            +    +  G+ ++   + ++M D
Sbjct: 512 TLANIYATAGMWSEVAKIRKTMDD 535



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
           +EAL IL ++     +P      + + +  +   L  G+  H ++  +G      I N +
Sbjct: 56  KEALQILHQI----DKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRL 111

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           ++MY KC     + ++FD M  + + SWN LI+G  K G ++ A+ +F +MP RD+ SW 
Sbjct: 112 LEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWT 171

Query: 442 TMLGGLTQENMFEEAMELFRVM-LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
            M+ G  + +   EA+ELFR+M  S+  K ++ T+    +A   +  L + K I+ YI +
Sbjct: 172 AMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMR 231

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
            G+  D  + +AL DM+ +CG  + A  +F +M  RD+  WTA I     +G  ++  +L
Sbjct: 232 TGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDL 291

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F ++LR GI+P+   F GVL AC++      G  +   MT + G  P       +V +  
Sbjct: 292 FADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRV-GFDPFSFAASALVHMYS 350

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           + G +  A  + K  P +P+   W SL+A   ++   D A
Sbjct: 351 KCGNMVSAERVFKETP-QPDLFSWTSLIAGYAQNGQPDEA 389



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 214/471 (45%), Gaps = 57/471 (12%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I S    + L + K+ H HI   G       +++++   A+    +SL  +QK FD   +
Sbjct: 77  IQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKC---DSLMDSQKLFDEMPE 133

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL---------- 145
            +     L  +N LI GY+ +GL  EA SL      F  +P++  F +            
Sbjct: 134 RD-----LCSWNILISGYAKMGLLQEAKSL------FDKMPERDNFSWTAMISGYVRHDR 182

Query: 146 -------------------NACTKSSAFGE---------GVQVHGAIVKMGFDRDVFVEN 177
                              N  T SSA            G ++HG I++ G D D  V +
Sbjct: 183 PNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWS 242

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
            L + YG+CG I + R +FD+M +R++V+WT++I    +    KE   LF +++  GI+P
Sbjct: 243 ALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRP 302

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           N  T   V++ACA   + ELG +V  Y+  +G    +   +ALV MY KCG + +A+++F
Sbjct: 303 NEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVF 362

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
            E    +L    ++++ Y + G   EA+   + ++  G +PD +T +  +SA A  G + 
Sbjct: 363 KETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVD 422

Query: 358 CG-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAG 415
            G    H    + GL         +ID+  + G+ + A  I   MS K     W SL+ G
Sbjct: 423 KGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG 482

Query: 416 LIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
              +G++   + A E   E+   +  ++ T+        M+ E  ++ + M
Sbjct: 483 CRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTM 533


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/566 (38%), Positives = 341/566 (60%), Gaps = 15/566 (2%)

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           ++  Y++    D A+ LF +  +R+L   N +++ YVR    + A A+ + M    P  D
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERM----PERD 56

Query: 340 RVTMLSAVSASAQLGDLLCGR-MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
            V+  + +S  AQ G +   R + +   L+NG+  W    N ++  Y++ G+ E A R+F
Sbjct: 57  IVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGI-SW----NGLLAAYVQNGRIEDAKRLF 111

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           +   + T+VSWN L+ G ++       R +F  MP RD ISW+ M+ G +Q    EEA+ 
Sbjct: 112 ESKMDWTLVSWNCLMGGFVR-----KRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALH 166

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
            F  M  +  +++R +     S C  + AL+L + ++  + K G      +  AL+ M+ 
Sbjct: 167 FFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYC 226

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           +CG    A   F+ + ++DV +W   I   A  G GE+A+ +F  M   GI+PD    V 
Sbjct: 227 KCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVS 286

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VL ACSH GLV+QG   F SM   +G++ ++VHY CMVDLLGRAG L EA +L+K+MP E
Sbjct: 287 VLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFE 346

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+   WG+LL A + H N ++   AA+ I E++P  SG+++LLS +YA++G+W++  ++R
Sbjct: 347 PDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMR 406

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
           L+M+ +G++K+PG S +EV  K+H F  GD SHP  + I + L EM+ +L+  GY+    
Sbjct: 407 LEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTN 466

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            V  DV+E+EK ++L +HSEKLA+A+G++      PIRV+KNLR+C DCH+  K +SK+ 
Sbjct: 467 LVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIV 526

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            R II+RDN+RFH+F  GSCSC DFW
Sbjct: 527 GRLIILRDNHRFHYFEGGSCSCRDFW 552



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 183/402 (45%), Gaps = 53/402 (13%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           +RD+F  N ++  Y    D+   R +F+ M ER++VSW +++   A+     EA  +F++
Sbjct: 23  ERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYK 82

Query: 230 M-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           M ++ GI  N +         A +QN  + D     + E  M    +  N L+      G
Sbjct: 83  MPLKNGISWNGLL-------AAYVQNGRIED--AKRLFESKMDWTLVSWNCLMG-----G 128

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            V   + LF     R+ +  + +++ Y + G + EAL    EM     R +R +   A+S
Sbjct: 129 FVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALS 188

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLE-GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
             + +  L  GR  H  +++ G + GW  + N ++ MY KCG  + A   F  +  K VV
Sbjct: 189 TCSNIAALELGRQLHCRLVKAGYQTGW-YVGNALLAMYCKCGSIDEARDAFQEILEKDVV 247

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SWN++I G  ++G                                 EEA+ +F +M +  
Sbjct: 248 SWNTMIHGYARHG-------------------------------FGEEALTVFELMKTTG 276

Query: 468 IKVDRVTMVGVASACGYLGALDL-AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
           I+ D  TMV V +AC + G +D  +++ Y+     GI   +   T +VD+  R G  + A
Sbjct: 277 IRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEA 336

Query: 527 MQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
             + + M  + D + W A +GA  + GN   GE+A ++  EM
Sbjct: 337 QNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEM 378



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 162/332 (48%), Gaps = 18/332 (5%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+++ GY+  G   EA  ++ ++     L +  ++  +L A  ++    +  +    + 
Sbjct: 60  WNAMLSGYAQNGFVDEAREIFYKMP----LKNGISWNGLLAAYVQNGRIEDAKR----LF 111

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +   D  +   NCL+      G +   R +FD M +R+ +SW+++I   ++    +EA++
Sbjct: 112 ESKMDWTLVSWNCLMG-----GFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALH 166

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F EM  +  + N  +  C +S C+ +  LELG ++   + + G +    + NAL+ MY 
Sbjct: 167 FFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYC 226

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG++D A+  F E  ++++V  NT++  Y R G   EAL + + M   G RPD  TM+S
Sbjct: 227 KCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVS 286

Query: 346 AVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-N 403
            ++A +  G +  G      + R+ G+         M+D+  + G+ E A  +  +M   
Sbjct: 287 VLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFE 346

Query: 404 KTVVSWNSLIAGLIKNGDV---ESAREVFSEM 432
               +W +L+     +G+    E A ++  EM
Sbjct: 347 PDAATWGALLGASRIHGNTELGEKAAQIIFEM 378



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 1/202 (0%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           DN        ++++I GYS  G   EA+  +VE+       ++ +F   L+ C+  +A  
Sbjct: 138 DNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALE 197

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G Q+H  +VK G+    +V N L+  Y +CG I + R  F E+ E++VVSW ++I   A
Sbjct: 198 LGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYA 257

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID-ELGMKANA 274
           R    +EA+ +F  M   GI+P+  TMV V++AC+    ++ G      ++ + G+ A  
Sbjct: 258 RHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKL 317

Query: 275 LMVNALVDMYMKCGAVDTAKQL 296
           +    +VD+  + G ++ A+ L
Sbjct: 318 VHYTCMVDLLGRAGQLEEAQNL 339


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/742 (34%), Positives = 398/742 (53%), Gaps = 58/742 (7%)

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           ++ S +   C Q      ++ +      +  D+  +  ++ +N +I GY   G   E I 
Sbjct: 12  THFSDIALICNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIR 71

Query: 125 LY-VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
            + + +   G+ PD  TFP VL AC       +G ++H   +K GF  DV+V   LI+ Y
Sbjct: 72  CFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLY 128

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP-NSVTM 242
                + + R +FDEM  R++ SW ++I    +    KEA+ L       G++  +SVT+
Sbjct: 129 SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTV 183

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           V ++SAC +  +   G  + +Y  + G+++  L                  +++F     
Sbjct: 184 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELLR---------------DCQKVFDRMYV 228

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R+L+  N+I+  Y        A+++  EM L   +PD +T++S  S  +QLGD+   R  
Sbjct: 229 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 288

Query: 363 HGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
            G+ LR G    D +I N ++ MY K G                                
Sbjct: 289 QGFTLRKGWFLEDITIGNAVVVMYAKLGL------------------------------- 317

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVAS 480
           V+SAR VF+ +P  D ISWNT++ G  Q     EA+E++ +M  E  I  ++ T V V  
Sbjct: 318 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 377

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC   GAL     ++  + KNG++ D+ + T+L DM+ +CG  + A+ +F ++ + +   
Sbjct: 378 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 437

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           W   I      G+GE+AV LF EML +G+KPD I FV +L+ACSH GLV++G   F  M 
Sbjct: 438 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 497

Query: 601 DIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
             +G++P + HYGCMVD+ GRAG L  AL  IKSM ++P+  IWG+LL+AC+ H NVD+ 
Sbjct: 498 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 557

Query: 661 AYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGK 720
             A+E + E++PE  G HVLLSN+YASAGKW  V  +R     +G+RK PG SS+EV+ K
Sbjct: 558 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 617

Query: 721 VHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKL 780
           V  F +G+++HP    +   L  +  +L+  GYVPD   VL DV++ EK+++L  HSE+L
Sbjct: 618 VEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERL 677

Query: 781 AMAFGLISTSKTMPIRVVKNLR 802
           A+AF LI+T     IR+ KNLR
Sbjct: 678 AIAFALIATPAKTTIRIFKNLR 699



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 249/529 (47%), Gaps = 74/529 (13%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           PS+  LK C+T+ +  + HC  LK G        + ++   ++   ++++  A+  FD  
Sbjct: 90  PSV--LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR---YKAVGNARILFDEM 144

Query: 94  -IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
            ++D      +  +N++I GY   G   EA++L   L       D  T   +L+ACT++ 
Sbjct: 145 PVRD------MGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG 194

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
            F  GV +H   +K G + ++               + D ++VFD M  R+++SW S+I 
Sbjct: 195 DFNRGVTIHSYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIK 239

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
           A    + P  A+ LF EM    I+P+ +T++ + S  ++L ++    R C  +    ++ 
Sbjct: 240 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI----RACRSVQGFTLRK 295

Query: 273 NALMV-----NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
              +      NA+V MY K G VD+A+ +F    + +++  NTI+S Y + G A EA+ +
Sbjct: 296 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 355

Query: 328 LDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
            + M   G    ++ T +S + A +Q G L  G   HG +L+NGL     +  ++ DMY 
Sbjct: 356 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 415

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG+ E A  +F  +     V WN+LIA    +G  E A  +F E               
Sbjct: 416 KCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE--------------- 460

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHC 505
                           ML E +K D +T V + SAC + G +D  +W +  ++ + GI  
Sbjct: 461 ----------------MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 504

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            ++    +VDM+ R G  + A++  + M  + D S W A + A  + GN
Sbjct: 505 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 553



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F H S+  ++     ++  +     +S    F  +  RD  +WN M+ G  +     E 
Sbjct: 10  MFTHFSDIALICNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEV 69

Query: 457 MELFRV-MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC---------D 506
           +  F + MLS  +  D  T   V  AC  +            I+ N IHC         D
Sbjct: 70  IRCFSLFMLSSGLTPDYRTFPSVLKACRTV------------IDGNKIHCLALKFGFMWD 117

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + +A +L+ +++R      A  +F  M  RD+ +W A I      GN ++A+ L N    
Sbjct: 118 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN---- 173

Query: 567 QGIKP-DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G++  DS+  V +L+AC+  G  N+G  +  S +  HG+  +++
Sbjct: 174 -GLRAMDSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELL 216


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/587 (39%), Positives = 333/587 (56%), Gaps = 33/587 (5%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ A +   G      ++  L++  +  G +  A+Q+F E     + L NT+   YVR  
Sbjct: 29  KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           L  E+L +  +M   G RPD  T    V A +QLGD  CG   H +V++ G      +  
Sbjct: 89  LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++ MYMK G                               ++ SA  +F  M  +D ++
Sbjct: 149 ELVMMYMKFG-------------------------------ELSSAEFLFESMQVKDLVA 177

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           WN  L    Q      A+E F  M ++ ++ D  T+V + SACG LG+L++ + IY    
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K  I C++ +  A +DM  +CG+ + A  +F  M++R+V +W+  I   AM G+  +A+ 
Sbjct: 238 KEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALT 297

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM--TDIHGVSPQIVHYGCMVD 617
           LF  M  +G++P+ + F+GVL+ACSH GLVN+G   F  M  ++   + P+  HY CMVD
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVD 357

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGR+GLL EA + IK MPVEP+  IWG+LL AC  H+++ +    A+ + E  P+    
Sbjct: 358 LLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY 417

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           HVLLSNIYA+AGKW  V +VR +M++ G +K+   SS+E  GK+H F  GD+SHP+   I
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAI 477

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
              L E+  ++R  GYVPD  +V  DV+ +EK+  LSHHSEKLA+AFGLI      PIRV
Sbjct: 478 YEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRV 537

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +KNLR C DCH+F+K VS +   EII+RD NRFH FR G CSC +FW
Sbjct: 538 MKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 206/424 (48%), Gaps = 39/424 (9%)

Query: 26  AKTTPKDSPSIGSL--KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
           AK TP     +  L   +     +LK+ H  +L+ G   K S +++++     +G    +
Sbjct: 3   AKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIG---DM 59

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
            YA++ FD   K       +F++N+L +GY    L  E++ LY ++   G+ PD+FT+PF
Sbjct: 60  CYARQVFDEMHKPR-----IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPF 114

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           V+ A ++   F  G  +H  +VK GF     V   L+  Y + G++     +F+ M  ++
Sbjct: 115 VVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 174

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +V+W + +  C +      A+  F +M  + ++ +S T+V ++SAC +L +LE+G+ +  
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 234

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              +  +  N ++ NA +DM++KCG  + A+ LF E K RN+V  +T++  Y   G +RE
Sbjct: 235 RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSRE 294

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +   M   G RP+ VT L  +SA +  G            L N  + + S+     D
Sbjct: 295 ALTLFTTMQNEGLRPNYVTFLGVLSACSHAG------------LVNEGKRYFSLMVQSND 342

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNT 442
             ++  K+  AC                ++  L ++G +E A E   +MP   D   W  
Sbjct: 343 KNLEPRKEHYAC----------------MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386

Query: 443 MLGG 446
           +LG 
Sbjct: 387 LLGA 390



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 37/397 (9%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++H  +++ GF     +   L+      GD+   R+VFDEM +  +  W +L     R  
Sbjct: 29  KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           LP E++ L+ +M + G++P+  T   V+ A ++L +   G  + A++ + G     ++  
Sbjct: 89  LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            LV MYMK G + +A+ LF   + ++LV  N  ++  V+ G +  AL   ++M     + 
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D  T++S +SA  QLG L  G   +    +  ++    + N  +DM++KCG  E A  +F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           + M  + VVSW+++I G   NGD                                 EA+ 
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDS-------------------------------REALT 297

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI----EKNGIHCDMQLATALV 514
           LF  M +E ++ + VT +GV SAC + G ++  K  ++ +    +KN +    +    +V
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKN-LEPRKEHYACMV 356

Query: 515 DMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAM 550
           D+  R G  + A +  ++M  + D   W A +GA A+
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAV 393



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 20/178 (11%)

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K I+A + + G      L T L++     GD   A QVF  M K  +  W          
Sbjct: 28  KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
               +++ L+ +M   G++PD   +  V+ A S  G  + G+ L             +V 
Sbjct: 88  QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFAL----------HAHVVK 137

Query: 612 YGC---------MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           YG          +V +  + G L  A  L +SM V+ + V W + LA C +  N  IA
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIA 194


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/706 (33%), Positives = 381/706 (53%), Gaps = 39/706 (5%)

Query: 15  PTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           P+     ++H    T +    +    + K++   KQ H H +  GL   P     +    
Sbjct: 4   PSQALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLA 63

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           A    F    +A+K FD        + +LF +N++IR Y+  GL  +A+ L+V++   G 
Sbjct: 64  AAYAMFGCAPHARKLFD-----ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGR 118

Query: 135 -LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
             PD +T+PFV+ AC        G  +H   V  GFD D FV+N L+  Y  CG++   R
Sbjct: 119 RWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVAR 178

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           RVFD M ER +VSW ++I    +    KEA+ +F  M+ +GI+P+  T+V V+  C+ L+
Sbjct: 179 RVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLK 238

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            LE+G RV A ++   +  +  + N+L+DMY KCG +D A+ +F E   R++V   T+M+
Sbjct: 239 ELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMN 298

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y+  G AR AL +   M     +P+ VT+ S +SA A L  L  GR  HG+ +R  LE 
Sbjct: 299 GYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLES 358

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              +   +IDMY KC    ++ R+F   S +                             
Sbjct: 359 EVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAP------------------------- 393

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                 WN ++ G     +  +A+ELF+ ML E +  +  T+  +  A  +L  L  A+ 
Sbjct: 394 ------WNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARN 447

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD--VSAWTAAIGAMAME 551
           ++ Y+ ++G    +++AT L+D++++CG  + A  +F  + K+D  +  W+A I    M 
Sbjct: 448 MHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMH 507

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G+GE A+ LF++M++ G+KP+ I F  +L ACSH GLV++G  LF+ M + + +S +  H
Sbjct: 508 GHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDH 567

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y C++DLLGRAG L EA +LI++M   PN  +WG+LL +C  H+NV++   AA+ + EL+
Sbjct: 568 YTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELE 627

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           P  +G +VLL+NIY++ G+W +   VRL M   G+RK P  S IEV
Sbjct: 628 PGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 259/776 (33%), Positives = 400/776 (51%), Gaps = 81/776 (10%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCLINFYGECGDIVDGRRVFDEMSER 202
           VL  C        G Q+HG  ++ G DR DV V   L++ Y +   +VDGR+VF+ M +R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           NVV+WTSL+    +     + + LFF M  EG+ PNSVT   V+S  A    ++LG RV 
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV------ 316
           A   + G  +   + N+L++MY KCG V+ A+ +F   + R++V  NT+M+  V      
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288

Query: 317 --------------------------------RLGLAREALAILDEMLLHGPRPDRVTML 344
                                           +LGLAR+  + + +   H        ++
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALM 348

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            A S + QLG+ L       ++L +G +   S    MI+  ++ G   +A  +F  M   
Sbjct: 349 DAYSKAGQLGNAL-----DIFLLMSGSQNVVSW-TAMINGCIQNGDVPLAAALFSRMRED 402

Query: 405 -----------------------------------TVVSWNSLIAGLIKNGDVESAREVF 429
                                              T +   +L+A   K  + E A  +F
Sbjct: 403 GVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIF 462

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA-L 488
             +  +D +SW+ ML    Q    + A  +F  M    +K +  T+  V  AC    A +
Sbjct: 463 KMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGV 522

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
           DL +  +A   K+  H  + +++ALV M+AR G  + A  +F R   RD+ +W + +   
Sbjct: 523 DLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGY 582

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
           A  G  ++A+++F +M  +GI+ D + F+ V+  C+H GLV +G   F SM   +G++P 
Sbjct: 583 AQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPT 642

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
           + HY CMVDL  RAG L EA+ LI+ M      ++W +LL AC+ H+NV++   AAE++ 
Sbjct: 643 MEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLL 702

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
            L+P  S  +VLLSNIY++AGKW     VR  M  + ++K  G S I++  KVH F + D
Sbjct: 703 SLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASD 762

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           +SHP    I + LR M  +L+  GY PD +  L +V E++K+ +L+ HSE+LA+AFGLI+
Sbjct: 763 KSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIA 822

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           T    P+ + KNLR+C DCH+  K+VSK+ DREI++RD +RFH F  G CSC DFW
Sbjct: 823 TPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 169/390 (43%), Gaps = 58/390 (14%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL-AILDEMLLHGPRPDRVTMLSAVSASA 351
           A+Q F E   RN +  +  + ++ R G   +AL   LD    HG R     ++  +    
Sbjct: 57  ARQAFDEIPHRNTL--DHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
            + D + G+  HG  +R G +  D  +  +++DMYMK        ++F+ M  + VV+W 
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWT 174

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           SL+ G I++G                                  + MELF  M +E +  
Sbjct: 175 SLLTGYIQDG-------------------------------ALSDVMELFFRMRAEGVWP 203

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           + VT   V S     G +DL + ++A   K G    + +  +L++M+A+CG  + A  VF
Sbjct: 204 NSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 263

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS------ 584
             ME RD+ +W   +  + + G+  +A++LF++            +  V+  C+      
Sbjct: 264 CGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLG 323

Query: 585 -----HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
                H  ++ +G+H + ++               ++D   +AG LG ALD+   M    
Sbjct: 324 LARQLHSSVLKRGFHSYGNVMT------------ALMDAYSKAGQLGNALDIFLLMSGSQ 371

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITE 669
           N V W +++  C ++ +V +AA    R+ E
Sbjct: 372 NVVSWTAMINGCIQNGDVPLAAALFSRMRE 401


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 271/828 (32%), Positives = 426/828 (51%), Gaps = 61/828 (7%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGL--GHKPSYISKVVCTC-AQM-GTFESLTYAQKAFD 91
           LK C  L +L   K+ H  I + GL    +    ++ +  C  QM G       AQ+AFD
Sbjct: 21  LKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFD 80

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
                N     +F + S++  Y   GL  +A+  + ++   G+ PD+  F   LN C   
Sbjct: 81  SIAHKN-----IFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 135

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
               +G  +H  I     D D+ + N L++ YG+CG +   +++FD +  +NV+SWT L+
Sbjct: 136 KRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILV 195

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA-YIDELGM 270
              A     +E   L   M  EGIKP+ V ++ +++ C+    L+    +   YI   G+
Sbjct: 196 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGL 255

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRN--LVLC-NTIMSNYVRLGLAREALAI 327
              A++  AL+ M+ +CG VD A+++F +  D +  ++ C N +++ Y   G ++EAL +
Sbjct: 256 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 315

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           LD + L G +P+ +T +S++ A + L D   GR  H  +  +G +   S+ N ++ MY +
Sbjct: 316 LDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVSVANALVTMYGR 372

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG                     SL+         +SA+ +FSEM  +D  SWN+ +   
Sbjct: 373 CG---------------------SLL---------DSAK-LFSEMAEKDLASWNSAIAAH 401

Query: 448 TQENMFEEAMELFRVMLSER-IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
                 +E ++L   M  E  ++   VT+V   SACG L     +K ++    + G+  +
Sbjct: 402 AYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESE 461

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             +A  LVDM+ + GD   A  +F R  +R+V+ W A  GA    G     + L   M R
Sbjct: 462 TCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQR 521

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
            G +PDS+ FV +L+ C H GL+ +  + F +M    G+ P   HY C++DLL RAG L 
Sbjct: 522 DGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQ 581

Query: 627 EALDLIKSMPVE--PNDVIWGSLLAACQKHQNVDIAAYA----AERITELDP----EKSG 676
           +A D I  + V    +  +W +LL AC+   +    A      A  + +++P    + S 
Sbjct: 582 QAEDFIARISVSSPASSPMWMALLGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSA 641

Query: 677 VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
            HV L+NI A++G W     +R  M E+G+RK PG S I V  ++HEF +GD  HP    
Sbjct: 642 AHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREE 701

Query: 737 ISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIR 796
           I + LR +   + D GYV D   V  +V E +K+ LL  HSEKLA+AFG++ST     +R
Sbjct: 702 IYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLR 761

Query: 797 VVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++KNLR C DCH+  KL+S +  REI+VRD+NRFH FR GSCSC D+W
Sbjct: 762 IIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 809


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/678 (34%), Positives = 372/678 (54%), Gaps = 39/678 (5%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           +++ F+ NCL+  YG C  I D    F E++E+N  S+  ++ A    DL K+A+ LF +
Sbjct: 14  EKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKK 73

Query: 230 MVEEGIKPNSVTMVCVISACAKLQN--LELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            + E ++ N  T V V+ +CA L    LE G  +  +    G   + ++ N+L+ MY KC
Sbjct: 74  SINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKC 133

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G+   A  +F + + +NL+   +++  Y       EA  +  +ML  G  PD     +A+
Sbjct: 134 GSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAAL 193

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           +    + +   G   H  V     E    +C N ++ MY + G+   A  +FD +  K +
Sbjct: 194 AVCPTIRE---GEAIH--VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDL 248

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
            S+N++IA   K  D   A  ++ EM GR+            + N++             
Sbjct: 249 ASYNNMIAVFAKYDDGSKAISLYIEMEGRN-----------LEPNLW------------- 284

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
                  T   V  AC  LGAL   K I+  ++      D+   TALV+M+A+CG    A
Sbjct: 285 -------TFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEA 337

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
             VF     ++V  WT+ + A +  G  +  +E +  M  +G+ PD + F  +  ACSH 
Sbjct: 338 RAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHS 397

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GL ++G   FR+M + H + P   HY CM+DLLGR G L EA +L+++MP  P+ V W  
Sbjct: 398 GLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTI 457

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL+AC+ + ++ I A A +RITEL+P  SG ++L+ N+YA AGKW +VA V+  +K++G+
Sbjct: 458 LLSACKVYGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGL 517

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            K PG S IE   ++HEF  GD +HP    I + L+E++ +L  AGY PD   VL+DV+E
Sbjct: 518 AKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNE 577

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           + K  LL  HSE++A+  GL+++     + +VKNLR+C DCHSF KLVSK+  R+++VRD
Sbjct: 578 EVKPELLLFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRD 637

Query: 827 NNRFHFFRQGSCSCSDFW 844
           ++RFH F++GSCSC D+W
Sbjct: 638 SHRFHIFQRGSCSCGDYW 655



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 216/511 (42%), Gaps = 69/511 (13%)

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
           C     G  +S+  A  AF    + NE S     Y  ++  Y    L  +A+ L+ +   
Sbjct: 22  CLVRAYGRCKSIDDAVAAFSEIAEKNEYS-----YAIMMGAYQENDLHKKALQLFKKSIN 76

Query: 132 FGILPDKFTFPFVLNACTK--SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDI 189
             +  ++ T+  VL +C         +G ++H   +  GF  D+ V+N LI+ Y +CG  
Sbjct: 77  EELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSF 136

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                VF++M  +N++S+TS+I A        EA  L+ +M+ EGI P+       ++ C
Sbjct: 137 KFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVC 196

Query: 250 ----------AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
                      KL N E    VC+              NALV MY + G + +AK +F  
Sbjct: 197 PTIREGEAIHVKLGNHERRTPVCS--------------NALVGMYGRFGRIASAKWVFDG 242

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
            + ++L   N +++ + +     +A+++  EM      P+  T  S + A ++LG L  G
Sbjct: 243 IRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEG 302

Query: 360 RMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           +  H  V + G +  D   NT +++MY KCG    A  +F+    K V +W SL++    
Sbjct: 303 KEIHKKV-KGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAY-- 359

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
                         PG+                     +E ++ M  E +  D VT   +
Sbjct: 360 ------------SQPGQSQYR-----------------LEAYQRMNCEGVIPDDVTFTAI 390

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLA-TALVDMFARCGDPQRAMQVFRRME-KR 536
            +AC + G  D     +  + ++     +Q   T ++D+  R G  + A ++ R M    
Sbjct: 391 FNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSP 450

Query: 537 DVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           DV  WT  + A  + G+   G +A +   E+
Sbjct: 451 DVVTWTILLSACKVYGDLKIGARAYKRITEL 481



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 179/406 (44%), Gaps = 29/406 (7%)

Query: 39  LKNCKTLNEL-----KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           LK+C  L E      K+ H H + QG G      + ++   A+ G+F+   +A   F+  
Sbjct: 90  LKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFK---FAAGVFEKM 146

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
              N     L  Y S+I+ Y+     VEA  LY ++   GI+PD + +   L  C     
Sbjct: 147 EPKN-----LISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVC---PT 198

Query: 154 FGEGVQVHGAIVKMGFD--RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
             EG  +H   VK+G    R     N L+  YG  G I   + VFD +  +++ S+ ++I
Sbjct: 199 IREGEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMI 255

Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
              A+ D   +A+ L+ EM    ++PN  T   V+ AC+KL  L  G  +   +      
Sbjct: 256 AVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQP 315

Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
            +     ALV+MY KCG+   A+ +F +C  +N+    ++MS Y + G ++  L     M
Sbjct: 316 TDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRM 375

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW----DSICNTMIDMYMK 387
              G  PD VT  +  +A +  G L    + +   +R   + W          MID+  +
Sbjct: 376 NCEGVIPDDVTFTAIFNACSHSG-LPDEGLLYFRAMRE--DHWIVPLQPHYTCMIDLLGR 432

Query: 388 CGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            G+   A  +   M  +  VV+W  L++     GD++     +  +
Sbjct: 433 VGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRI 478


>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/493 (43%), Positives = 314/493 (63%), Gaps = 32/493 (6%)

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           + D+  G   H  V+R+G      + N+++ +Y  CG                       
Sbjct: 1   MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG----------------------- 37

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
                   DV SA +VF +MP +D ++WN+++ G  +    EEA+ L+  M S+ IK D 
Sbjct: 38  --------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 89

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
            T+V + SAC  +GAL L K ++ Y+ K G+  ++  +  L+D++ARCG  + A  +F  
Sbjct: 90  FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 149

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLTACSHGGLVNQ 591
           M  ++  +WT+ I  +A+ G G++A+ELF  M   +G+ P  I FVG+L ACSH G+V +
Sbjct: 150 MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 209

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
           G+  FR M + + + P+I H+GCMVDLL RAG + +A + IKSMP++PN VIW +LL AC
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 269

Query: 652 QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
             H + D+A +A  +I +L+P  SG +VLLSN+YAS  +W++V ++R QM   G++K+PG
Sbjct: 270 TVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPG 329

Query: 712 SSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
            S +EV  +VHEF  GD+SHP+ + I + L+EM  RLR  GYVP ++NV +DV+E+EK+ 
Sbjct: 330 HSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKEN 389

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
            + +HSEK+A+AF LIST +  PI VVKNLR+C DCH   KLVSKVY+REI+VRD +RFH
Sbjct: 390 AVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFH 449

Query: 832 FFRQGSCSCSDFW 844
            F+ GSCSC D+W
Sbjct: 450 HFKNGSCSCQDYW 462



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 145/276 (52%), Gaps = 11/276 (3%)

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G  +H  +++ GF   ++V+N L++ Y  CGD+    +VFD+M E+++V+W S+I   A 
Sbjct: 7   GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
              P+EA+ L+ EM  +GIKP+  T+V ++SACAK+  L LG RV  Y+ ++G+  N   
Sbjct: 67  NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LLHG 335
            N L+D+Y +CG V+ AK LF E  D+N V   +++      G  +EA+ +   M    G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186

Query: 336 PRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
             P  +T +  + A +  G +  G     RM   Y +   +E +      M+D+  + G+
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF----GCMVDLLARAGQ 242

Query: 391 QEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESA 425
            + A      M     VV W +L+     +GD + A
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 153/309 (49%), Gaps = 34/309 (11%)

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           + ++ LG+ + + +   G  +   + N+L+ +Y  CG V +A ++F +  +++LV  N++
Sbjct: 1   MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           ++ +   G   EALA+  EM   G +PD  T++S +SA A++G L  G+  H Y+++ GL
Sbjct: 61  INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
                  N ++D+Y +CG+ E A  +FD M +K  VSW SLI GL  NG           
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG----------- 169

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS-ERIKVDRVTMVGVASACGYLGALDL 490
                                 +EA+ELF+ M S E +    +T VG+  AC + G +  
Sbjct: 170 --------------------FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 209

Query: 491 A-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAM 548
             ++     E+  I   ++    +VD+ AR G  ++A +  + M  + +V  W   +GA 
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 269

Query: 549 AMEGNGEQA 557
            + G+ + A
Sbjct: 270 TVHGDSDLA 278



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)

Query: 80  FESLTYAQK------------AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
           F SL Y Q             A  Y + D      L  +NS+I G++  G   EA++LY 
Sbjct: 19  FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 78

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           E+   GI PD FT   +L+AC K  A   G +VH  ++K+G  R++   N L++ Y  CG
Sbjct: 79  EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 138

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVI 246
            + + + +FDEM ++N VSWTSLI   A     KEA+ LF  M   EG+ P  +T V ++
Sbjct: 139 RVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 198

Query: 247 SACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK-DRN 304
            AC+    ++ G      + +E  ++        +VD+  + G V  A +         N
Sbjct: 199 YACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN 258

Query: 305 LVLCNTIM 312
           +V+  T++
Sbjct: 259 VVIWRTLL 266


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/575 (39%), Positives = 343/575 (59%), Gaps = 39/575 (6%)

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N  ++ ALV +      +  A Q+F + +  N+   NT++  +        A+ +  +M 
Sbjct: 71  NKHLIFALVSL---SAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQM- 126

Query: 333 LHGPR---PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            H      PD  T      A A+L D+  G   H  V+RNG +    + N+++ MY    
Sbjct: 127 -HAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMY---- 181

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
                          +V+            G + SA +VF  M  RD ++WN+++ G   
Sbjct: 182 ---------------SVL------------GSLXSAYQVFEIMSYRDRVAWNSVINGFAL 214

Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
             M  EA+ L+R M SE ++ D  TMV + SAC  LGAL L + ++ Y+ K G+  +   
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
           + AL+D++++CG+ + A +VF  ME+R V +WT+ I  +A+ G G +A++LF E+ RQG+
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGL 334

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
           KP  I FVGVL ACSH G++++G++ FR M + +G+ P+I H+GCMVDLL RAG +G+A 
Sbjct: 335 KPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAY 394

Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           D I++MPV PN VIW +LL AC  H ++++   A   I  L+   SG  VLLSN+YAS  
Sbjct: 395 DYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLR 749
           +W +V  VR  M  +G++K PG S +E+  +V+EF  GD SHP+     +ML ++   L+
Sbjct: 455 RWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLK 514

Query: 750 DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHS 809
             GYVP   NVL D++E+EK+  LSHH+EK+A+AF L++T    PIR++KNLR+C DCH 
Sbjct: 515 IEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHL 574

Query: 810 FAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             KL+SKV++REIIVRD +RFH F+ GSCSC D+W
Sbjct: 575 AIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 230/483 (47%), Gaps = 39/483 (8%)

Query: 46  NELKQPHCHILKQGLG-HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           ++LKQ H   ++ G+    P +   ++     +     +++A + F+     N     +F
Sbjct: 49  SKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSA--PMSFAAQIFNQIQAPN-----IF 101

Query: 105 MYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
            +N++IRG++       A+ L+ ++ A   ILPD  TFPF+  A  K      G  +H  
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           +V+ GFD   FV+N L++ Y   G +    +VF+ MS R+ V+W S+I   A   +P EA
Sbjct: 162 VVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEA 221

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + L+ EM  EG++P+  TMV ++SAC +L  L LG+RV  Y+ ++G+  N    NAL+D+
Sbjct: 222 LTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDL 281

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG    A+++F E ++R++V   +++      GL  EAL +  E+   G +P  +T 
Sbjct: 282 YSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITF 341

Query: 344 LSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +  + A +  G L  G     RM   Y +   +E        M+D+  + GK   A   +
Sbjct: 342 VGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHH----GCMVDLLCRAGKVGDA---Y 394

Query: 399 DHMSNKTV----VSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           D++ N  V    V W +L+     +G +   E AR     +  R    +  +      E 
Sbjct: 395 DYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
            + +   + ++ML          M GV    GY   ++L   +Y +I  +  H   +   
Sbjct: 455 RWLDVQNVRKIML----------MKGVKKTPGY-SLVELKNRVYEFIMGDRSHPQSEETY 503

Query: 512 ALV 514
           A++
Sbjct: 504 AML 506


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/676 (35%), Positives = 370/676 (54%), Gaps = 41/676 (6%)

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKP-NSVTMVCVISACAKLQNLELGDRVCAY 264
           ++T L+  C R +   +A  L   M     +P +S     ++   AK   L     +   
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNL--- 80

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
            D++ +K +    NAL+  Y K G++   K  F     R+ V  NT ++ +      +E+
Sbjct: 81  FDKM-LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +   M   G  P   T++S ++ASAQL DL  G+  HG ++     G   I N + DM
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD----------------------- 421
           Y KCG+ E A  +FD ++ K +VSWN +I+G  KNG                        
Sbjct: 200 YAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM 259

Query: 422 ------------VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                       V+ AR VFSE   +D + W  M+ G  +    E+A+ LF  ML E I+
Sbjct: 260 STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D  T+  V S+C  L +L   + ++      G++ ++ +++AL+DM+++CG    A  V
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSV 379

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M  R+V +W A I   A  G+ + A+ELF  ML+Q  KPD++ F+G+L+AC H   +
Sbjct: 380 FNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWI 439

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            QG   F S+++ HG++P + HY CMV+LLGR G + +A+ LIK+M  +P+ +IW +LL+
Sbjct: 440 EQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
            C    ++  A  AA  + ELDP  +  +++LSN+YAS G+W +VA VR  MK + ++K 
Sbjct: 500 ICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKF 559

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
            G S IE++ +VH FTS D +HPE  +I   L  +  +L++ G+ P+   VL DV E EK
Sbjct: 560 AGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEK 619

Query: 770 KYLLSHHSEKLAMAFGLISTSKTM-PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
              +  HSEKLA+AFGLI     + PIR++KN+R+C DCH F K  S++  R+II+RD+N
Sbjct: 620 FKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSN 679

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F  G CSC+D W
Sbjct: 680 RFHHFSTGKCSCNDNW 695



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 212/450 (47%), Gaps = 68/450 (15%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+ I G+S      E++ L+  +   G  P ++T   +LNA  +      G Q+HG+I+
Sbjct: 123 YNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSII 182

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
              F  +VF+ N L + Y +CG+I   R +FD ++++N+VSW  +I   A+   P++ + 
Sbjct: 183 VRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIG 242

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L  +M   G  P+ VTM  +I+A                                   Y 
Sbjct: 243 LLHQMRLSGHMPDQVTMSTIIAA-----------------------------------YC 267

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           +CG VD A+++F E K++++V    +M  Y + G   +AL + +EMLL    PD  T+ S
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSS 327

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            VS+ A+L  L  G+  HG  +  GL     + + +IDMY KCG  + A  +F+ M  + 
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           VVSWN++I G  +NG                                 ++A+ELF  ML 
Sbjct: 388 VVSWNAMIVGCAQNGHD-------------------------------KDALELFENMLQ 416

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQ 524
           ++ K D VT +G+ SAC +   ++  +  +  I  ++G+   +     +V++  R G  +
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIE 476

Query: 525 RAMQVFRRM-EKRDVSAWTAAIGAMAMEGN 553
           +A+ + + M    D   W+  +   + +G+
Sbjct: 477 QAVALIKNMAHDPDFLIWSTLLSICSTKGD 506



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 165/358 (46%), Gaps = 63/358 (17%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           ++ D  T   L  +N +I GY+  G   + I L  ++   G +PD+ T   ++ A     
Sbjct: 211 WLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA----- 265

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
                                         Y +CG + + RRVF E  E+++V WT+++ 
Sbjct: 266 ------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMV 295

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             A+    ++A+ LF EM+ E I+P+S T+  V+S+CAKL +L  G  V       G+  
Sbjct: 296 GYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNN 355

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N L+ +AL+DMY KCG +D A+ +F     RN+V  N ++    + G  ++AL + + ML
Sbjct: 356 NLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENML 415

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT------------ 380
               +PD VT +  +SA             H   +  G E +DSI N             
Sbjct: 416 QQKFKPDNVTFIGILSAC-----------LHCNWIEQGQEYFDSISNQHGMTPTLDHYAC 464

Query: 381 MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDV----ESAREVFSEMP 433
           M+++  + G+ E A  +  +M+ +   + W++L++     GD+     +AR +F   P
Sbjct: 465 MVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDP 522



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 132/257 (51%), Gaps = 12/257 (4%)

Query: 61  GHKPSYI--SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGL 118
           GH P  +  S ++    Q G  +    A++ F  + + +     +  + +++ GY+  G 
Sbjct: 251 GHMPDQVTMSTIIAAYCQCGRVDE---ARRVFSEFKEKD-----IVCWTAMMVGYAKNGR 302

Query: 119 GVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
             +A+ L+ E+    I PD +T   V+++C K ++   G  VHG  +  G + ++ V + 
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSA 362

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           LI+ Y +CG I D R VF+ M  RNVVSW ++I  CA+    K+A+ LF  M+++  KP+
Sbjct: 363 LIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPD 422

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +VT + ++SAC     +E G      I ++ GM         +V++  + G ++ A  L 
Sbjct: 423 NVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALI 482

Query: 298 GE-CKDRNLVLCNTIMS 313
                D + ++ +T++S
Sbjct: 483 KNMAHDPDFLIWSTLLS 499


>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/626 (37%), Positives = 372/626 (59%), Gaps = 38/626 (6%)

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           + V ++ +M   G++P++     +I +         G    A++ +LG  ++A + NA++
Sbjct: 13  KVVLMYEQMQGCGVRPDAFVYPILIKSAGTG-----GIGFHAHVLKLGHGSDAFVRNAVI 67

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY                  R +   N ++S Y +     +A  + D M    P  + +
Sbjct: 68  DMYA-----------------RKVADWNAMVSGYWKWESEGQAQWLFDVM----PERNVI 106

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T  + V+  A++ DL   R     +    +  W    N M+  Y + G  E A R+FD M
Sbjct: 107 TWTAMVTGYAKVKDLEAARRYFDCMPERSVVSW----NAMLSGYAQNGLAEEALRLFDEM 162

Query: 402 --SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
             + +  V+WN++I+  ++ GD++SAR++F+ MPGR+ ++WN+M+ G  Q      A+EL
Sbjct: 163 LGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIEL 222

Query: 460 FRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           F+ M++ +++  D VTMV V SACG+LGAL+L  W+  ++ +N I   +    A++ M++
Sbjct: 223 FKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYS 282

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           RCG  + A +VF+ M  RDV ++   I   A  G+G +A+ L + M   GI+PD + F+G
Sbjct: 283 RCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIG 342

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           VLTACSH GL+ +G  +F S+ D     P I HY CMVDLLGR G L +A   ++ MP+E
Sbjct: 343 VLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPME 397

Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
           P+  ++GSLL A + H+ V++   AA ++ EL+P+ SG  +LLSNIYASAG+W +V R+R
Sbjct: 398 PHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIR 457

Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
             MK+ G++K  G S +E  GK+H+F   D SH   ++I  +L E+  ++R+AGY+ D +
Sbjct: 458 EAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKS 517

Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
            VL DV+E+EK+ ++  HSEKLA+ + L+ +     IRVVKNLR+C DCH+  K++SK+ 
Sbjct: 518 CVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLE 577

Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
            R IIVRDNNRFH F  G CSC D+W
Sbjct: 578 GRVIIVRDNNRFHCFNDGLCSCKDYW 603



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 216/442 (48%), Gaps = 65/442 (14%)

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           ++R YS +    + + +Y ++ G G+ PD F +P ++    KS+  G G+  H  ++K+G
Sbjct: 1   MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILI----KSAGTG-GIGFHAHVLKLG 55

Query: 169 FDRDVFVENCLINFY----GECGDIVDG----------RRVFDEMSERNVVSWTSLICAC 214
              D FV N +I+ Y     +   +V G          + +FD M ERNV++WT+++   
Sbjct: 56  HGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGY 115

Query: 215 AR-RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKA 272
           A+ +DL  EA   +F+ + E    + V+   ++S  A  QN  L +      DE LG   
Sbjct: 116 AKVKDL--EAARRYFDCMPE---RSVVSWNAMLSGYA--QN-GLAEEALRLFDEMLGAYR 167

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N++  NA++  YM+ G +D+A++LF     RN+V  N++++ Y + G +  A+ +  EM+
Sbjct: 168 NSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMI 227

Query: 333 LHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
                 PD VTM+S +SA   LG L  G     ++  N ++   S  N MI MY +CG  
Sbjct: 228 TAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSM 287

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           E A R+F  M+ + VVS+N+LI+G   +G                         G+    
Sbjct: 288 EDAKRVFQEMATRDVVSYNTLISGFAAHGH------------------------GV---- 319

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              EA+ L   M    I+ DRVT +GV +AC + G L+  + ++  I+   I        
Sbjct: 320 ---EAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAI----DHYA 372

Query: 512 ALVDMFARCGDPQRAMQVFRRM 533
            +VD+  R G+ + A +   RM
Sbjct: 373 CMVDLLGRVGELEDAKRTMERM 394



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 179/364 (49%), Gaps = 31/364 (8%)

Query: 52  HCHILKQGLGHKP--------SYISKVVCTCAQMGTF---ESLTYAQKAFDYYIKDNETS 100
           H H+LK G G            Y  KV    A +  +   ES   AQ  FD   + N   
Sbjct: 48  HAHVLKLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERN--- 104

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGV 158
             +  + +++ GY+ +   +EA   Y     F  +P++   ++  +L+   ++    E +
Sbjct: 105 --VITWTAMVTGYAKVK-DLEAARRY-----FDCMPERSVVSWNAMLSGYAQNGLAEEAL 156

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++   +  +G  R+    N +I+ Y   GD+   R++F+ M  RNVV+W S+I   A+  
Sbjct: 157 RLFDEM--LGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNG 214

Query: 219 LPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
               A+ LF EM+  + + P+ VTMV VISAC  L  LELG+ V  ++ E  +K +    
Sbjct: 215 QSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGH 274

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           NA++ MY +CG+++ AK++F E   R++V  NT++S +   G   EA+ ++  M   G  
Sbjct: 275 NAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE 334

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PDRVT +  ++A +  G L  GR     +    ++ +      M+D+  + G+ E A R 
Sbjct: 335 PDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHY----ACMVDLLGRVGELEDAKRT 390

Query: 398 FDHM 401
            + M
Sbjct: 391 MERM 394


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/664 (35%), Positives = 366/664 (55%), Gaps = 38/664 (5%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
              D   F  +L+ C K  +  +   VHG +++  F  +VF++N LI+ YG+CG +   R
Sbjct: 20  FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79

Query: 194 RVFDEMSERNVVS-------------------------------WTSLICACARRDLPKE 222
           +VFD MSERNV S                               W S+I   A+ D  +E
Sbjct: 80  KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+  F  M  +    N  +    +SAC++L++L+LG ++   I +     +  M + L+D
Sbjct: 140 ALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLID 199

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            Y KCG V  A+++F   +++N+V  N +++ Y + G A EAL     M   G +PD VT
Sbjct: 200 FYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVT 259

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHM 401
           + S VSA A L     G   H  V+++     D I  N ++DMY KCG+   A  +FD M
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             +  VS  ++++G  K+  V++AR +F+ +  +D +SWN ++ G TQ    EEA+ LFR
Sbjct: 320 PVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFR 379

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC------DMQLATALVD 515
           ++  E +     T   + +A   L  L+L +  ++++ K+G         D+ +  +L+D
Sbjct: 380 MLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLID 439

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ +CG  +  ++VF  M ++D  +W   I   A  G G +A+ELF +ML  G KPD + 
Sbjct: 440 MYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVT 499

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
            +G L ACSH GLV +G   F SMT  HG+ P   HY CMVDLLGRAG L EA DLI+SM
Sbjct: 500 MIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESM 559

Query: 636 PVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           P +P+ V+W SLL+AC+ H+N+ +  Y AE+I E+DP  SG +VLL+N+Y+  G+W +  
Sbjct: 560 PKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAV 619

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
            VR  M+ +G+ K PG S I++   VH F   D+ HP+   I S+L+ +   +R AGYVP
Sbjct: 620 SVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVP 679

Query: 756 DLTN 759
           D ++
Sbjct: 680 DASD 683



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/538 (29%), Positives = 249/538 (46%), Gaps = 99/538 (18%)

Query: 83  LTYAQKAFDYYIKDN-----------------ETSATLFM---------YNSLIRGYSCI 116
           L YA+K FD   + N                 + SA LF          +NS+I G++  
Sbjct: 75  LDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQH 134

Query: 117 GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE 176
               EA+  +V +     + + ++F   L+AC++      G Q+HG I K  +  DVF+ 
Sbjct: 135 DRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMG 194

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK-EAVYLFFEMVEEGI 235
           + LI+FY +CG +   RRVFD M E+NVVSW  LI  C  ++ P  EA+  F  M E G 
Sbjct: 195 SGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLI-TCYEQNGPAIEALEAFGRMTELGF 253

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NALVDMYMKCG------ 288
           KP+ VT+  V+SACA L   + G ++ A + +     N L++ NALVDMY KCG      
Sbjct: 254 KPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEAR 313

Query: 289 -------------------------AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
                                    +V  A+ +F   K +++V  N +++ Y + G   E
Sbjct: 314 CVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEE 373

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS------I 377
           AL +   +      P   T  + ++ASA L DL  GR  H +V+++G            +
Sbjct: 374 ALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFV 433

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N++IDMYMKCG  E   R+F++M  K  VSWN++I G  +NG                 
Sbjct: 434 GNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNG----------------- 476

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYA 496
                   G+       EA+ELF+ ML    K D VTM+G   AC + G ++   ++ ++
Sbjct: 477 -------YGM-------EALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFS 522

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAMAMEGN 553
             +++G+       T +VD+  R G  + A  +   M K+ D   W++ + A  +  N
Sbjct: 523 MTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRN 580


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/671 (35%), Positives = 363/671 (54%), Gaps = 79/671 (11%)

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           ++C  +R    +EAV L + +     KP +   + ++  C K + L+ G +V A+I   G
Sbjct: 97  ILCGQSRL---REAVQLLYRIE----KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG 149

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
                 + N L+DMY KCG++  A+++F E   R+L   N ++S YV+ G   +A  + D
Sbjct: 150 -SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFD 208

Query: 330 EMLLHGPRPDRVTMLSAVSASAQ------------------------------------L 353
           +M    P  D  +  + +S   Q                                    +
Sbjct: 209 KM----PNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAI 264

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
             L  G+  HG+++R GL+  + +  +++DMY KCG                        
Sbjct: 265 PSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCG------------------------ 300

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
                   +E AR +F +M  RD +SW TM+    +    EE   LFR +++  I  +  
Sbjct: 301 -------SIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDF 353

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T  GV +AC  L A DL K I+AY+ + G       A+ALV M+++CGD + A  VF  +
Sbjct: 354 TFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEIL 413

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
            + D+ +WT+ +   A  G  ++A+  F  +L+ G KPD I F+GVL+AC+H GLV++G 
Sbjct: 414 PQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGL 473

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
             F S+ + HG++  I HY C++DLL RAG   EA  +I  MP++P+  IW +LL  C+ 
Sbjct: 474 EYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRI 533

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H N+++A  AA+ + E++PE    +V L+NIYASAG     A +R  M  +GI K PG S
Sbjct: 534 HGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMS 593

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            IE+  +VH F+ GD SHP+   I   L E++ R+++ GYVPD   VL DV+ ++K+  L
Sbjct: 594 WIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENL 653

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
           S+HSEKLA+AFG+IST    PI+V KNLR C DCH+  K +S +  R+IIVRD+NRFH F
Sbjct: 654 SYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCF 713

Query: 834 RQGSCSCSDFW 844
             GSCSC D+W
Sbjct: 714 EGGSCSCKDYW 724



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 207/448 (46%), Gaps = 66/448 (14%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C K  A  EG QVH  I   G    +++ N L++ Y +CG +VD  +VFDEM  R+
Sbjct: 125 LLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRD 183

Query: 204 V-------------------------------VSWTSLICACARRDLPKEAVYLFFEMVE 232
           +                                SWT++I  C + + P+EA+ L+  M +
Sbjct: 184 LCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQK 243

Query: 233 EGI-KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
               K N  T+   ++A A + +L +G ++  +I  +G+ ++ ++  +L+DMY KCG+++
Sbjct: 244 HDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIE 303

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A+ +F + ++R++V   T++  Y++ G   E  A+   ++     P+  T    ++A A
Sbjct: 304 EARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACA 363

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            L     G+  H Y++R G + + S  + ++ MY KCG  E A  +F+ +    + SW S
Sbjct: 364 DLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTS 423

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           L+ G  ++G                                 ++A+  F ++L    K D
Sbjct: 424 LLVGYAQHGQ-------------------------------HDKALHFFELLLKSGTKPD 452

Query: 472 RVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
            +  +GV SAC + G +D   ++ ++  EK+G+   +     ++D+ AR G    A  + 
Sbjct: 453 GIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESII 512

Query: 531 RRME-KRDVSAWTAAIGAMAMEGNGEQA 557
             M  K D   W A +G   + GN E A
Sbjct: 513 NEMPIKPDKYIWAALLGGCRIHGNLELA 540



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 9/252 (3%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K+ H HI++ GL       S  V  C+ +  +      ++A   YI D      +  + +
Sbjct: 271 KKIHGHIMRMGLD------SDEVVWCSLLDMYGKCGSIEEA--RYIFDKMEERDVVSWTT 322

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +I  Y   G   E  +L+  L    I+P+ FTF  VLNAC   +A   G Q+H  +V++G
Sbjct: 323 MIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVG 382

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           FD      + L++ Y +CGDI + + VF+ + + ++ SWTSL+   A+     +A++ F 
Sbjct: 383 FDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFE 442

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMVNALVDMYMKC 287
            +++ G KP+ +  + V+SACA    ++ G      I E  G+         ++D+  + 
Sbjct: 443 LLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARA 502

Query: 288 GAVDTAKQLFGE 299
           G    A+ +  E
Sbjct: 503 GQFTEAESIINE 514


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/615 (37%), Positives = 353/615 (57%), Gaps = 39/615 (6%)

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK---CGAV 290
            ++P S +++ +I  C  L+ L+   ++ AY  +   + N  ++  L++         ++
Sbjct: 30  ALEPPSSSILSLIPKCTSLRELK---QIQAYTIK-THQNNPTVLTKLINFCTSNPTIASM 85

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           D A ++F +    ++VL NT+   Y R      A+ +  ++L  G  PD  T  S + A 
Sbjct: 86  DHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKAC 145

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           A+L  L  G+  H   ++ G+     +C T+I+MY  C                      
Sbjct: 146 ARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACN--------------------- 184

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                     DV++AR VF ++     +++N ++    + +   EA+ LFR +    +K 
Sbjct: 185 ----------DVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKP 234

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
             VTM+   S+C  LGALDL +WI+ Y++KNG    +++ TAL+DM+A+CG    A+ VF
Sbjct: 235 TDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVF 294

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           + M +RD  AW+A I A A  G+G QA+ +  EM +  ++PD I F+G+L ACSH GLV 
Sbjct: 295 KDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVE 354

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G+  F SMT  +G+ P I HYGCM+DLLGRAG L EA   I  +P++P  ++W +LL++
Sbjct: 355 EGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSS 414

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C  H NV++A    +RI ELD    G +V+LSN+ A  G+W +V  +R  M ++G  K+P
Sbjct: 415 CSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVP 474

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL-DVDEQEK 769
           G SSIEVN  VHEF SGD  H     +   L E+   L+ AGYVPD + V   D++++EK
Sbjct: 475 GCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEK 534

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + +L +HSEKLA+ +GL++T     IRVVKNLR+C DCH+ AK +S ++ R+II+RD  R
Sbjct: 535 EIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQR 594

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+ G CSC D+W
Sbjct: 595 FHHFKDGKCSCGDYW 609



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 222/425 (52%), Gaps = 19/425 (4%)

Query: 17  VTTLTNQHKAKTTPKDSPS---IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCT 73
           + T   +H+  T   + PS   +  +  C +L ELKQ   + +K    + P+ ++K++  
Sbjct: 17  LNTEAPRHEPNTAALEPPSSSILSLIPKCTSLRELKQIQAYTIKTH-QNNPTVLTKLINF 75

Query: 74  CAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG 133
           C    T  S+ +A + FD   + +     + ++N++ RGY+     + AI L  ++   G
Sbjct: 76  CTSNPTIASMDHAHRMFDKIPQPD-----IVLFNTMARGYARFDDPLRAILLCSQVLCSG 130

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +LPD +TF  +L AC +  A  EG Q+H   VK+G   +++V   LIN Y  C D+   R
Sbjct: 131 LLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAAR 190

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           RVFD++ E  VV++ ++I +CAR   P EA+ LF E+ E G+KP  VTM+  +S+CA L 
Sbjct: 191 RVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLG 250

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            L+LG  +  Y+ + G      +  AL+DMY KCG++D A  +F +   R+    + ++ 
Sbjct: 251 ALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIV 310

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLR 368
            Y   G   +A+++L EM     +PD +T L  + A +  G +  G      M H Y + 
Sbjct: 311 AYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIV 370

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNGDVESARE 427
             ++ +      MID+  + G+ E AC+  D +  K T + W +L++    +G+VE A+ 
Sbjct: 371 PSIKHY----GCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKL 426

Query: 428 VFSEM 432
           V   +
Sbjct: 427 VIQRI 431


>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1182

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 343/564 (60%), Gaps = 11/564 (1%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNT-IMSNYVRLGLAREALAILDEMLL-HGPRPDRVTMLS 345
            ++  A +LF +    +L + NT I S+ +      +++A+   ++   G  P+R + + 
Sbjct: 224 ASLTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVF 283

Query: 346 AVSASAQLGDLLC---GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           A  A    G+ +C   G     + ++ GL+G   + N +I M+ K G+ E A  +FD   
Sbjct: 284 AFGAC---GNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAV 340

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           ++   SWN++I   + +G++  A+E+F EM  RD +SW+T++ G  Q   F EA++ F  
Sbjct: 341 DRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHK 400

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML   +K +  TMV   +AC  L ALD  KWI+ YI ++ I  + +L  +L+DM+A+CG+
Sbjct: 401 MLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGE 460

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
              A  VF   + KR V  W A IG  AM G  E+A+ +F +M  + + P+ + F+ +L 
Sbjct: 461 IDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLN 520

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSHG +V +G   F  M   +G++P+I HYGCMVDLL R+G L ++ ++I SMP+ P+ 
Sbjct: 521 ACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDV 580

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            IWG+LL AC+ +++++        I E+DP   G +VLL NIY+++G+W     VR + 
Sbjct: 581 AIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKN 640

Query: 702 KEQGIR-KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNV 760
           +    R K+PG SSIE+NG  HEF  GD SHP+   I S L EM  +L+ AGYVP+L  V
Sbjct: 641 EINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEV 700

Query: 761 LLDV-DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           LLD  DE++K+  LS HSEKLA+AFGL++T+   PIR+VKNLR+C DCH   K +SKVYD
Sbjct: 701 LLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIRIVKNLRVCGDCHQATKFISKVYD 760

Query: 820 REIIVRDNNRFHFFRQGSCSCSDF 843
           R IIVRD  R+H F+ G CSC D+
Sbjct: 761 RVIIVRDRMRYHHFKDGICSCKDY 784



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 210/457 (45%), Gaps = 74/457 (16%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           CK++N++KQ H +++       P   +K +   A      SLTYA K FD   + +    
Sbjct: 189 CKSINQIKQTHANLITTAQITLPVIANKFLKNVA----LASLTYAHKLFDQIPQPD---- 240

Query: 102 TLFMYNSLIRGYSCIGLG-VEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
            LF+YN++I+ +S      +++I+++  L    G  P++++F F   AC       EG Q
Sbjct: 241 -LFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQ 299

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD---------------------- 197
           V    VK+G D +VFV N LI  +G+ G + D R VFD                      
Sbjct: 300 VFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGN 359

Query: 198 ---------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
                    EM ER+VVSW+++I    +     EA+  F +M++  +KPN  TMV  ++A
Sbjct: 360 MVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAA 419

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK-DRNLVL 307
           C+ L  L+ G  +  YI    +K N  ++ +L+DMY KCG +D+A  +F E K  R +  
Sbjct: 420 CSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWP 479

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N ++  +   G   EA+ + ++M +    P++VT ++ ++A +           HGY++
Sbjct: 480 WNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACS-----------HGYMV 528

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           + G                K   + MA    D+  N  +  +  ++  L ++G ++ + E
Sbjct: 529 KEG----------------KSYFELMAS---DYGINPEIEHYGCMVDLLSRSGHLKDSEE 569

Query: 428 VFSEMP-GRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           +   MP   D   W  +L         E    + R++
Sbjct: 570 MILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRII 606


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/691 (35%), Positives = 377/691 (54%), Gaps = 41/691 (5%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           LN+ T S    +  Q H  I+K G   D  +   L++ Y       D   V D + E NV
Sbjct: 22  LNSTTAS--LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNV 79

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
            S+++LI A ++      A+  F +M+  G+ P++  +   + ACA L  L+   +V   
Sbjct: 80  FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139

Query: 265 IDELGMKANALMVNALVDMYMKC-------------------------------GAVDTA 293
               G  +++ + ++LV MY+KC                               G VD A
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 294 KQLFGECKDR----NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           K+LF E  D     NL+  N +++ +   GL  EA+ +  +M L G  PD  T+ S + A
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPA 259

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
              L DL+ G + HGYV++ GL     + + +IDMY KC       ++FD M +  V S 
Sbjct: 260 VGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSC 319

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           N+ I GL +NG VES+  +F ++  +    + +SW +M+   +Q     EA+ELFR M  
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQI 379

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             +K + VT+  +  ACG + AL   K  + +  + GI  D+ + +AL+DM+A+CG  Q 
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQA 439

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           +   F  +  +++  W A I   AM G  ++A+E+F+ M R G KPD I F  VL+ACS 
Sbjct: 440 SRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQ 499

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GL  +G + F SM+  +G+  ++ HY CMV LL RAG L +A  +I+ MPV P+  +WG
Sbjct: 500 SGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWG 559

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL++C+ H NV +   AAE++ EL+P   G ++LLSNIYAS G W  V RVR  MK +G
Sbjct: 560 ALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           +RK PG S IEV  KVH   +GD+SHP+M  I   L +++  ++  GY P++  VL DV+
Sbjct: 620 LRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVE 679

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIR 796
           EQ+K+ +L  HSEKLA+ FGL++T    P++
Sbjct: 680 EQDKEQILCGHSEKLAVVFGLLNTPPGYPLQ 710



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 155/596 (26%), Positives = 259/596 (43%), Gaps = 114/596 (19%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +L++ +Q H HILK GL +     +K++   A    F   T         + D      +
Sbjct: 28  SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATL--------VLDLVPEPNV 79

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F +++LI  +S       A+S + ++   G++PD    P  + AC   SA     QVHG 
Sbjct: 80  FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
               GFD D FV++ L++ Y +C  I D  RVFD M E +VVSW++L+ A AR+    EA
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 224 VYLFFEMVEEGIKPNSV-----------------------------------TMVCVISA 248
             LF EM + G++PN +                                   T+  V+ A
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPA 259

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC--------------------- 287
              L++L +G  +  Y+ + G+ ++  + +AL+DMY KC                     
Sbjct: 260 VGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSC 319

Query: 288 ----------GAVDTAKQLFGECKDR----NLVLCNTIMSNYVRLGLAREALAILDEMLL 333
                     G V+++ +LF + KD+    N+V   ++++   + G   EAL +  EM +
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQI 379

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G +P+ VT+   + A   +  L+ G+  H + LR G+     + + +IDMY KCG+ + 
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQA 439

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           +   FD +  K +V WN++IAG   +G                                 
Sbjct: 440 SRICFDGIPTKNLVCWNAVIAGYAMHGKA------------------------------- 468

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATA 512
           +EAME+F +M     K D ++   V SAC   G  +   + +  +  K GI   ++    
Sbjct: 469 KEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYAC 528

Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           +V + +R G  ++A  + RRM    D   W A + +  +  N   GE A E   E+
Sbjct: 529 MVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFEL 584



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 42/290 (14%)

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           + L+ +ALA+LD +        + T+L+ ++++     L   R  H ++L+ GL      
Sbjct: 1   MSLSAQALALLDSV--------QHTILNCLNSTT--ASLSQTRQAHAHILKTGL------ 44

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
                          +A ++  H +N    +  +L+  L+   +V               
Sbjct: 45  ----------FNDTHLATKLLSHYANNMCFADATLVLDLVPEPNV--------------- 79

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
            S++T++   ++ + F  A+  F  ML+  +  D   +     AC  L AL  A+ ++  
Sbjct: 80  FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
              +G   D  + ++LV M+ +C   + A +VF RM + DV +W+A + A A +G  ++A
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
             LF+EM   G++P+ I + G++   +H GL ++   +F  M  + G  P
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEP 248


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 251/794 (31%), Positives = 419/794 (52%), Gaps = 58/794 (7%)

Query: 52  HCHILKQG-LGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLI 110
           H H++++G +G    + + V+      G    L  A++ FD   + N  S     + +L+
Sbjct: 82  HGHVVRRGGVGRLDLFCANVLLN--MYGKLGPLASARRLFDRMPERNMVS-----FVTLV 134

Query: 111 RGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFD 170
           + ++  G    A +L+  L   G   ++F    +L       A G    VH    K+G D
Sbjct: 135 QAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHD 194

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
            + FV + LI+ Y  C  + D   VF+ +  ++ V WT+++   +  D P+ A    F  
Sbjct: 195 HNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA----FRC 250

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
            +      S +++ +  +CA+      G   CA I  L       +  AL+DMY KCG +
Sbjct: 251 AQ------SCSLLAI--SCARQ-----GIHGCA-IKTLN-DTEPHVGGALLDMYAKCGDI 295

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
             A+  F      +++L + ++S Y +     +A  +   ++     P+  ++ S + A 
Sbjct: 296 KDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 355

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
             +  L  G+  H + ++ G E    + N ++D Y KC                      
Sbjct: 356 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN--------------------- 394

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                     D++S+ ++FS +   + +SWNT++ G +Q  + EEA+ +F  M + ++  
Sbjct: 395 ----------DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 444

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
            +VT   V  AC    ++  A  I+  IEK+  + D  +  +L+D +A+CG  + A++VF
Sbjct: 445 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 504

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           + + +RD+ +W A I   A+ G    A+ELF+ M +  ++ + I FV +L+ C   GLVN
Sbjct: 505 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVN 564

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            G  LF SM   HG+ P + HY C+V LLGRAG L +AL  I  +P  P+ ++W +LL++
Sbjct: 565 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 624

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C  H+NV +  ++AE+I E++P+    +VLLSN+YA+AG    VA +R  M+  G+RK+P
Sbjct: 625 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 684

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G S +E+ G++H F+ G   HP+M  I++ML  +N +    GY+PD+  VL DVD+++K 
Sbjct: 685 GLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKT 744

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
            +L  HSE+LA+A+GL+ T    PIR++KNLR C DCH+   ++SK+  REIIVRD NRF
Sbjct: 745 RMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRF 804

Query: 831 HFFRQGSCSCSDFW 844
           H F  G CSC D+W
Sbjct: 805 HHFEDGKCSCGDYW 818



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/559 (23%), Positives = 233/559 (41%), Gaps = 63/559 (11%)

Query: 128 ELAGFGILP-----DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF--DRDVFVENCLI 180
           EL    ILP     D F     L  C        G  VHG +V+ G     D+F  N L+
Sbjct: 44  ELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLL 103

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           N YG+ G +   RR+FD M ERN+VS+ +L+ A A+R   + A  LF  +  EG + N  
Sbjct: 104 NMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQF 163

Query: 241 TMVCVISACAKLQ--NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            +  ++     +    L  G   CA+  +LG   NA + + L+D Y  C  V  A+ +F 
Sbjct: 164 VLTTMLKLAIAMDAAGLAGGVHSCAW--KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFN 221

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
               ++ V+   ++S Y        A            R  +   L A+S + Q      
Sbjct: 222 GIVRKDAVVWTAMVSCYSENDCPENAF-----------RCAQSCSLLAISCARQ------ 264

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
               HG  ++   +    +   ++DMY KC                              
Sbjct: 265 --GIHGCAIKTLNDTEPHVGGALLDMYAKC------------------------------ 292

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
            GD++ AR  F  +P  D I  + M+    Q N  E+A ELF  ++   +  +  ++  V
Sbjct: 293 -GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSV 351

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC  +  LD  K I+ +  K G   D+ +  AL+D +A+C D   ++++F  +   + 
Sbjct: 352 LQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANE 411

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W   +   +  G GE+A+ +F EM    +    + +  VL AC+    +     +  S
Sbjct: 412 VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCS 471

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           + +    +   V    ++D   + G + +AL + + + +E + + W ++++    H    
Sbjct: 472 I-EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHGQAA 529

Query: 659 IAAYAAERITELDPEKSGV 677
            A    +R+ + + E + +
Sbjct: 530 DALELFDRMNKSNVESNDI 548


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/620 (35%), Positives = 356/620 (57%), Gaps = 33/620 (5%)

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
              M   G+  N      V++ C + + +  G RV A++ +        +   L+  Y+K
Sbjct: 46  LLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVK 105

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           C ++  A+ +F    +RN+V    ++S Y + G A +AL++  +ML  G  P+  T  + 
Sbjct: 106 CDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATV 165

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           +++       + GR  H ++++   E    + ++++DMY K GK                
Sbjct: 166 LTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGK---------------- 209

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                          +  AR +F  +P RD +S   ++ G  Q  + EEA+ELFR +  E
Sbjct: 210 ---------------IHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQRE 254

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            ++ + VT   V +A   L ALD  K ++ ++ ++ +   + L  +L+DM+++CG+   A
Sbjct: 255 GMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYA 314

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSH 585
            ++F  + +R V +W A +   +  G G + +ELFN M+ +  +KPDS+  + VL+ CSH
Sbjct: 315 RRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSH 374

Query: 586 GGLVNQGWHLFRSMTDIH-GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           GGL ++G  +F  MT     V P   HYGC+VD+LGRAG +  A + +K MP EP+  IW
Sbjct: 375 GGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIW 434

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
           G LL AC  H N+DI  +   ++ +++PE +G +V+LSN+YASAG+W +V  +R  M ++
Sbjct: 435 GCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKK 494

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDV 764
            + K PG S IE++  +H F + D SHP    +S+ ++E++ R ++AGYVPDL+ VL DV
Sbjct: 495 AVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDV 554

Query: 765 DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
           DE++K+ +L  HSEKLA+ FGLI+T +++PIRV+KNLR+C DCH+FAK  SK+Y RE+ +
Sbjct: 555 DEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSL 614

Query: 825 RDNNRFHFFRQGSCSCSDFW 844
           RD NRFH    G CSC D+W
Sbjct: 615 RDKNRFHRIVGGKCSCGDYW 634



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 217/414 (52%), Gaps = 35/414 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           VLN C +  A  EG +VH  ++K  +   V++   LI FY +C  + D R VFD M ERN
Sbjct: 64  VLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERN 123

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSWT++I A ++R    +A+ LF +M+  G +PN  T   V+++C       LG ++ +
Sbjct: 124 VVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHS 183

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           +I +L  +A+  + ++L+DMY K G +  A+ +F    +R++V C  I+S Y +LGL  E
Sbjct: 184 HIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEE 243

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +   +   G + + VT  S ++A + L  L  G+  H ++LR+ +  +  + N++ID
Sbjct: 244 ALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLID 303

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG    A RIFD +  +TV+SWN+++ G  K+G+            GR        
Sbjct: 304 MYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGE------------GR-------- 343

Query: 444 LGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIE--K 500
                      E +ELF +M+ E ++K D VT++ V S C + G  D    I+  +   K
Sbjct: 344 -----------EVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGK 392

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN 553
             +  D +    +VDM  R G  + A +  ++M     +A W   +GA ++  N
Sbjct: 393 ISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSN 446



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 155/275 (56%), Gaps = 6/275 (2%)

Query: 81  ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
           +SL  A+  FD   + N  S T     ++I  YS  G   +A+SL+V++   G  P++FT
Sbjct: 107 DSLRDARHVFDVMPERNVVSWT-----AMISAYSQRGYASQALSLFVQMLRSGTEPNEFT 161

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  VL +C  SS F  G Q+H  I+K+ ++  V+V + L++ Y + G I + R +F  + 
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           ER+VVS T++I   A+  L +EA+ LF  +  EG++ N VT   V++A + L  L+ G +
Sbjct: 222 ERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQ 281

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           V  ++    + +  ++ N+L+DMY KCG +  A+++F    +R ++  N ++  Y + G 
Sbjct: 282 VHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGE 341

Query: 321 AREALAILDEMLLHGP-RPDRVTMLSAVSASAQLG 354
            RE L + + M+     +PD VT+L+ +S  +  G
Sbjct: 342 GREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGG 376


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/573 (40%), Positives = 329/573 (57%), Gaps = 40/573 (6%)

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR--PDRVTMLSAVSASAQLGDLLCG 359
           DR  V  N ++       L R+AL +   M   G    PD  T   A+ + A    L+ G
Sbjct: 82  DRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVLG 141

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R  H    R GL+G   + ++ I MY +CG+ + A ++F+ M  + VVSWN++I+G    
Sbjct: 142 RQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHA 201

Query: 420 G--------------------------------------DVESAREVFSEMPGRDHISWN 441
           G                                      D+   + VF EM  +  ISWN
Sbjct: 202 GLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWN 261

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            ML   T   M  EA+ELF  M  + I+ D VT+  V  +CG + AL L K I+  I++ 
Sbjct: 262 AMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRR 321

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +   M L  AL+DM+A CG  + A  VF  M  RDV +WT+ I A    G+G +A++LF
Sbjct: 322 RMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLF 381

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
            +M  QG++PDSI FV +L ACSH GL++ G H F SMT    ++P++ HY CMVDLLGR
Sbjct: 382 EKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGR 441

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG + EA D I  MP++PN+ +WG+LL AC+ H N+DI   AA+ +  L P+++G +VLL
Sbjct: 442 AGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLL 501

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIYA AG+W +V+ VR  M+ +GI+KLPG S+ E+  +VH F  GD SHP+   I   L
Sbjct: 502 SNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKL 561

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
            E+  R+R+ GY P++   L DV+E++K+  LS HSEKLA+AF LI+T+   PIR+  NL
Sbjct: 562 SELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNL 621

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           R C DCH  AKL+S +  REII++D NR H+ +
Sbjct: 622 RTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 654



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 210/482 (43%), Gaps = 69/482 (14%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKS 151
           + D     T   +N L+RG +   L  +A+ L+  +   G    PD +T+P  L +C  +
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
                G Q+H +  ++G D +VFV +  I+ Y  CG   D  ++F+EM  R+VVSW ++I
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 212 CACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
              A   L   A+ +F E+V  +  KP++ TM  ++ +  K           A ++++ +
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK-----------ARVEDIAL 244

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
                                  K +F E + + L+  N +++ Y    +  EA+ +   
Sbjct: 245 ----------------------LKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMR 282

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M   G  PD VT+ + + +  ++  L  G+  H  + R  +     + N ++DMY  CG 
Sbjct: 283 MQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 342

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            + A  +FD M  + VVSW S+I+   ++G             GR               
Sbjct: 343 LKEARDVFDSMGTRDVVSWTSIISAYGRHGH------------GR--------------- 375

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCDMQL 509
               EA++LF  M  + ++ D +  V + +AC + G LD+ K + Y+   +  I   ++ 
Sbjct: 376 ----EAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEH 431

Query: 510 ATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
              +VD+  R G  + A      M  K +   W A +GA  +  N +  +   + +LR  
Sbjct: 432 YACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLA 491

Query: 569 IK 570
            K
Sbjct: 492 PK 493



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 9/230 (3%)

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV--DRVTMVGVASACGYL 485
           V    P R  + +N +L GLT  ++  +A+ LF  M  +      D  T      +C   
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
             L L + I++   + G+  ++ +A + + M+ARCG P  A Q+F  M+ RDV +W A I
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 546 GAMAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
              A  G   +A+++F E++  Q  KPD+     +L   S G    +   L + + D   
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILP--SMGKARVEDIALLKGVFDEMR 253

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAAC 651
               ++ +  M+ +     +  EA++L   M    +EP+ V   ++L +C
Sbjct: 254 FK-GLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSC 302


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 260/771 (33%), Positives = 416/771 (53%), Gaps = 41/771 (5%)

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
           G   S+  A+K FD           +  +N++I  Y+      +AI ++  +   G+  +
Sbjct: 146 GKCSSVEDARKVFD-----GIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAE 200

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR--DVFVENCLINFYGECGDIVDGRRV 195
           + TF  VL+AC+K         V   + +   D   D      L+NFYG CGD+    R 
Sbjct: 201 RITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRA 260

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           F       +++ T++I    +R+   EA+ LF  M+ EG+K + +  + V++AC+  + L
Sbjct: 261 FSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGL 319

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           E G  +  ++ E+    +    NAL++MY KCG+++ A ++F   + R+++  NTI++ +
Sbjct: 320 EEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAH 379

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            +     EAL +L  M L G + D+++ ++A+   A    L  GRM H +++ +G++   
Sbjct: 380 GQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADV 439

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + N ++DMY  C   + A R                               VF  M  R
Sbjct: 440 MLDNAILDMYGSCKSTDDASR-------------------------------VFRAMKVR 468

Query: 436 DHISWNTMLGGLT-QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
           D +SWN M+     Q  +  EA+ LF+ M       D ++ V   SAC    +L   K +
Sbjct: 469 DQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLL 528

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +  I + G+  +M +A A+++M+A+ G    A ++F +M   DV +W   I A A  G+ 
Sbjct: 529 HDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHA 588

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT-DIHGVSPQIVHYG 613
           +Q +  F  M  +G  P+ + FV V++ACSHGGLV  G  LF S+  D   +SP+  HY 
Sbjct: 589 DQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYY 648

Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
           CMVDL+ RAG L  A   I + P++P+ VI  ++L A + H++V+ A  +AE + EL P+
Sbjct: 649 CMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPD 708

Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
           +S  +V+LSN+Y   GK    A++R  M E+ IRK P  SSI V  +VHEF +GD ++  
Sbjct: 709 RSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNAR 768

Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
              I   L  ++  +  AGY PD T +L DV +++KK LLS+HSEKLA+AFGLIST+   
Sbjct: 769 TPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGT 828

Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +R++KNLR+C DCH+  K +SK+  REI+VRD++RFH F  G+CSC D+W
Sbjct: 829 SLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 170/623 (27%), Positives = 302/623 (48%), Gaps = 48/623 (7%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY-IKDNET 99
           + ++L+  K+ H  I K  +   P     +V      G   SL  A+  FD   ++D  T
Sbjct: 10  DSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCG---SLIDAKACFDRMPVQDALT 66

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF-GEGV 158
                 +  LIR +  IG   +A+ L+  +   G+ P    F  VL AC+       EG 
Sbjct: 67  ------WARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++HG +     + D +V   L++ YG+C  + D R+VFD +  + VV W ++I A A++D
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD--RVCAYIDELGMKANALM 276
             ++A+ +F+ M+ EG+K   +T + V+ AC+KL++LE+    ++C    E     ++  
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             ALV+ Y  CG ++ A + F   +   L+L   +++ Y +     EAL +   MLL G 
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHR-LELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           + DR+  ++ ++A +    L  GR+ HG++     +   +  N +I+MY KCG  E A  
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F  M ++ V+SWN++IA    +G                            Q +   EA
Sbjct: 360 VFRSMQHRDVISWNTIIAA---HG----------------------------QHSQHPEA 388

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           + L  +M  + +K D+++ V     C    AL   + I+++I ++GI  D+ L  A++DM
Sbjct: 389 LHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDM 448

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN-GEQAVELFNEMLRQGIKPDSIV 575
           +  C     A +VFR M+ RD  +W A I A A +     +A+ LF +M   G  PD I 
Sbjct: 449 YGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVIS 508

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           FV  L+AC+    + +G  L   + +  G+   +     ++++  ++G L  A  +   M
Sbjct: 509 FVAALSACAAQASLAEGKLLHDRIRET-GLESNMTVANAVLNMYAKSGTLVLARKMFGKM 567

Query: 636 PVEPNDVIWGSLLAACQKHQNVD 658
           P+ P+ + W  +++A  +H + D
Sbjct: 568 PL-PDVISWNGMISAFAQHGHAD 589



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 239/510 (46%), Gaps = 37/510 (7%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L+    S +   G +VH  I K   DR  F+ + L+  Y +CG ++D +  FD M  ++
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQNLELGDRVC 262
            ++W  LI A  +    ++A++LF  M  EG+ P +   V V+ AC A  + LE G R+ 
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
             +    M+++  +   L+ MY KC +V+ A+++F   + + +V  N +++ Y +     
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW--DSICNT 380
           +A+ +   MLL G + +R+T +  + A ++L DL   ++    V     +     S    
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATA 243

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +++ Y  CG  E A R F     + +++                                
Sbjct: 244 LVNFYGSCGDLEQAFRAFSRHRLELILA-------------------------------- 271

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
             M+   TQ   ++EA+ELF+VML E +K+DR+  + V +AC     L+  + I+ ++ +
Sbjct: 272 TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMRE 331

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
                 +    AL++M+ +CG  + A++VFR M+ RDV +W   I A        +A+ L
Sbjct: 332 IRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHL 391

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
            + M   G+K D I FV  L  C+    + +G  +  S     G+   ++    ++D+ G
Sbjct: 392 LHLMQLDGVKADKISFVNALPLCATSEALAKG-RMIHSWIVESGIKADVMLDNAILDMYG 450

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
                 +A  + ++M V  + V W +++ A
Sbjct: 451 SCKSTDDASRVFRAMKVR-DQVSWNAMITA 479



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 222/447 (49%), Gaps = 31/447 (6%)

Query: 36  IGSLKNCKTLNELK-----------QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
           IG L  C  L +L+           + H H+      H  S+ + +V      G  E   
Sbjct: 205 IGVLDACSKLKDLEVAKLVKLCVEEREHDHL------HDSSFATALVNFYGSCGDLEQ-- 256

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
            A +AF  +         L +  ++I  Y+      EA+ L+  +   G+  D+     V
Sbjct: 257 -AFRAFSRH------RLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAV 309

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           LNAC+      EG  +HG + ++ FDR V   N LIN YG+CG + +   VF  M  R+V
Sbjct: 310 LNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDV 369

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +SW ++I A  +     EA++L   M  +G+K + ++ V  +  CA  + L  G  + ++
Sbjct: 370 ISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSW 429

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY-VRLGLARE 323
           I E G+KA+ ++ NA++DMY  C + D A ++F   K R+ V  N +++ Y  +  L+ E
Sbjct: 430 IVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSE 489

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +  +M LHG  PD ++ ++A+SA A    L  G++ H  +   GLE   ++ N +++
Sbjct: 490 ALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLN 549

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM--PGR--DHIS 439
           MY K G   +A ++F  M    V+SWN +I+   ++G  +     F  M   G+  + ++
Sbjct: 550 MYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVT 609

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSE 466
           + +++   +   + ++ ++LF  +L +
Sbjct: 610 FVSVVSACSHGGLVKDGVQLFVSLLHD 636


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/767 (33%), Positives = 403/767 (52%), Gaps = 44/767 (5%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           AQK FD       +  ++  YN LI GY  +G   +AI L+ E     +  DKF++  VL
Sbjct: 63  AQKLFD-----RMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVL 117

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           +AC +   F  G  +HG  +  G  + VF+ N LI+ Y +C  I   R +F+   E + V
Sbjct: 118 SACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNV 177

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA-KLQNL-ELGDRVCA 263
           SW SLI   AR    +E + L  +M   G++ N+ T+   + +C   L N+   G  +  
Sbjct: 178 SWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHG 237

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG---- 319
           Y  + G+  + ++  AL+DMY K G +  A QLF    ++N+V+ N +++ +++      
Sbjct: 238 YTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDK 297

Query: 320 -LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
             A EAL +  +M   G +P   T  S +     +     G+  H ++ ++ ++  + I 
Sbjct: 298 ECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIG 357

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           +T+I++Y                         SL+      G  E   + F+  P  D +
Sbjct: 358 STLIELY-------------------------SLL------GSTEDQLKCFNSTPKLDIV 386

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SW TM+ G  Q   FE A+ LF  +L+   K D   +  + SAC  + A    + ++ Y 
Sbjct: 387 SWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYA 446

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K GI     +  + + M+A+ G+   A   F  ++  DV +W+  I + A  G+ + A+
Sbjct: 447 VKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAI 506

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
            LF  M   GI P+ I F+GVLTACSHGGLV +G   + SM   + +   + H  C+VDL
Sbjct: 507 NLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDL 566

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           L RAG L +A + I +     + V+W +LL+ C+ ++++    + AE++ ELDP++S  +
Sbjct: 567 LSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSY 626

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLL NIY  AG      ++R  MK++GIRK PG S IEV  +VH F  GD SHP    I 
Sbjct: 627 VLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIY 686

Query: 739 SMLREMNCRLRDAGYVPD-LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
             L  M  + R  GY+   + NV +   E +    ++HHSEKLA++FG++S   + P++V
Sbjct: 687 KKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKV 746

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +KNLR+C DCH+  KL+S V  REII+RD+ RFH F++GSCSC+D+W
Sbjct: 747 MKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 257/554 (46%), Gaps = 62/554 (11%)

Query: 134 ILP-DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           + P D   +  ++   +KS +   G   H  ++K  F+  +F+ N  +N Y + G++ + 
Sbjct: 4   VFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNA 63

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           +++FD MSER+V+S+  LI          +A+ LF E     +K +  +   V+SAC ++
Sbjct: 64  QKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQI 123

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
           ++  LG  +       G+     + N L+DMY KC  +D A+ LF    + + V  N+++
Sbjct: 124 KDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLI 183

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV-SASAQLGDLLC-GRMCHGYVLRNG 370
           + Y R+G   E L +L +M   G R +  T+ SA+ S    L +++  G+  HGY ++ G
Sbjct: 184 TGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQG 243

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           L+    +   ++DMY K G    A ++F    N+ VV +N++IAG I+  D++       
Sbjct: 244 LDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDID------- 296

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                             +E  + EA++LF  M  + IK    T   +   C ++ A + 
Sbjct: 297 ------------------KECAY-EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEY 337

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            K I+A+I K+ I  D  + + L+++++  G  +  ++ F    K D+ +WT  I   A 
Sbjct: 338 GKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQ 397

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWHLF--- 596
            G  E A+ LF E+L  G KPD  +   +L+AC+           HG  V  G       
Sbjct: 398 NGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIV 457

Query: 597 -RSMTDIHGVS---------------PQIVHYGCMVDLLGRAGLLGEAL---DLIKSMPV 637
             S   ++  S               P +V +  M+    + G   +A+   +L+KS  +
Sbjct: 458 QNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGI 517

Query: 638 EPNDVIWGSLLAAC 651
            PN + +  +L AC
Sbjct: 518 HPNQITFLGVLTAC 531


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 274/848 (32%), Positives = 434/848 (51%), Gaps = 76/848 (8%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPS-YISKVVCTC-AQMGTFESLTYAQKAFD 91
           P+I S    +     +  H   L++ L H+P+  +S  + T  A+ G  ++      A  
Sbjct: 53  PAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFAATP 112

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAI-SLYVELAGFGILPDKFTFPFVLNACTK 150
             ++D  +      YNSLI           A+ +L   LA   +    FT   VL AC+ 
Sbjct: 113 PDLRDAVS------YNSLISALCLFRRWGHALDALRDMLADHEV--SSFTLVSVLLACSH 164

Query: 151 SSAFGE--GVQVHGAIVKMGF---DRDVFVENCLINFYGECGDIVDGRRVF--DEMSERN 203
            +  G   G + H   +K GF    R+ F  N L++ Y   G + D +R+F        +
Sbjct: 165 LADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGD 224

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +V+W ++I    +    +EAV + ++MV  G++P+ VT    + AC++L+ L +G  V A
Sbjct: 225 LVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHA 284

Query: 264 YI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNTIMSNYVRLG- 319
           ++  +  + AN+ + +ALVDMY     V  A+++F    +  R L + N ++  Y + G 
Sbjct: 285 FVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGG 344

Query: 320 LAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           +  EA+ +   M    G  P   TM   + A A+          HGYV++  +     + 
Sbjct: 345 MDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQ 404

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N ++DMY + G+                               ++ A  +F+ +  RD +
Sbjct: 405 NALMDMYARLGR-------------------------------MDEAHTIFAMIDLRDIV 433

Query: 439 SWNTMLGGLTQENMFEEAMELFRVML--------------------SERIKVDRVTMVGV 478
           SWNT++ G   + +  EA +L R M                      +R   + +T++ +
Sbjct: 434 SWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTL 493

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
              C  L A    K I+ Y  ++ +  D+ + +ALVDM+A+CG    A  VF R+ +R+V
Sbjct: 494 LPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNV 553

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
             W   I A  M G G++A+ LF+ M+  G   P+ + F+  L ACSH GLV++G  LF+
Sbjct: 554 ITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQ 613

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM-PVEPNDVIWGSLLAACQKHQN 656
            M   +G  P    + C+VD+LGRAG L EA  +I SM P E     W ++L AC+ H+N
Sbjct: 614 GMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRN 673

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
           V +   AAER+ EL+P+++  +VLL NIY++AG W N   VR  M+++G+ K PG S IE
Sbjct: 674 VKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIE 733

Query: 717 VNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHH 776
           ++G +H F +G+ +HPE   + + +  +  R+R  GYVPD + VL DVDE EK  +L +H
Sbjct: 734 LDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYH 793

Query: 777 SEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           SEKLA+AFGL+       IRV KNLR+C DCH  AK +S++  REI++RD  RFH FR G
Sbjct: 794 SEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDG 853

Query: 837 SCSCSDFW 844
           +CSC D+W
Sbjct: 854 TCSCGDYW 861


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/707 (33%), Positives = 364/707 (51%), Gaps = 35/707 (4%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           ++  +  AC K  +  +G  +H  + +   +    +ENCL+  Y +CG  +D ++VFDEM
Sbjct: 89  SYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEM 148

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             +N+VSW  +I A A+    ++A+ LF +M   GI+PNS   + ++ +C     LELG 
Sbjct: 149 LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGK 208

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ +++    + AN  +  A+ +MY++CG ++ AK +F     +N V    +M  Y +  
Sbjct: 209 QIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
               AL +   M + G   D       +     L D   GR  H ++++ G E   S+  
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGT 328

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++D Y+KCG                               D+ESA   F  +   + +S
Sbjct: 329 PLVDFYVKCG-------------------------------DIESAYRSFGRISEPNDVS 357

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           W+ ++ G +Q    E+ +++F  + SE + ++      V  AC     L++    +    
Sbjct: 358 WSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAI 417

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G+   +   +A+V M+++CG    A + F  +++ D  AWTA I   A  GN  +A+ 
Sbjct: 418 KRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALG 477

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            F  M   G++P+++ F+ VLTACSH GLV +      SM+  +GV P I HY CM+D  
Sbjct: 478 FFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTY 537

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            RAGLL EAL+LI  MP EP+ + W SLL  C  H ++ +   AAE +  LDP  +  ++
Sbjct: 538 SRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYI 597

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LL N+Y++ GKW     VR  M E+ ++K    S I V G+VH F  GD  HP+   I S
Sbjct: 598 LLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYS 657

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDV--DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
            L E  C + D+     L N   DV      +K  L  HSEKLA+AFGLIST    PI V
Sbjct: 658 KLEEFKCSVIDSPV--RLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLISTEDNAPILV 715

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KNLR C DCH F K VS V  R+I+VRD+ RFH F+ G CSC+D+W
Sbjct: 716 FKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 212/463 (45%), Gaps = 38/463 (8%)

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           QK FD  +  N  S  +     +I  Y+  G   +AI L+ ++   GI P+   +  +L 
Sbjct: 142 QKVFDEMLMKNLVSWVI-----VISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQ 196

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           +C   S    G Q+H  +++   + ++ VE  + N Y  CG +   + VFD M  +N V+
Sbjct: 197 SCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVT 256

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           WT L+    +    + A+ LF  M  EG++ +      V+  C  L++ ++G ++ ++I 
Sbjct: 257 WTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIV 316

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           +LG ++   +   LVD Y+KCG +++A + FG   + N V  + ++S + + G   + + 
Sbjct: 317 KLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIK 376

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           I   +   G   +     S   A A   +L  G   HG  ++ GL  +    + M+ MY 
Sbjct: 377 IFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYS 436

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG+ + A R F+ +     V+W ++I+G   +G+                         
Sbjct: 437 KCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNA------------------------ 472

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHC 505
                   EA+  FR M S  ++ + VT + V +AC + G +  AK     + ++ G+  
Sbjct: 473 -------AEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKP 525

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
            +     ++D ++R G  Q A+++  RM  + D  +W + +G 
Sbjct: 526 TIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 211/467 (45%), Gaps = 26/467 (5%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNC--KTLNEL-KQPHCHILKQGLGHKPSYISKVVC 72
            +   ++   +   P  +  +  L++C   +  EL KQ H H+++  L    +  + +  
Sbjct: 172 AIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICN 231

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
              + G  E    A+  FD     N  +     +  L+ GY+       A+ L+  +A  
Sbjct: 232 MYVRCGWLEG---AKLVFDGMDAQNAVT-----WTGLMVGYTQAKKLEVALELFARMAME 283

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+  D+F F  VL  C     +  G Q+H  IVK+G + +V V   L++FY +CGDI   
Sbjct: 284 GVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESA 343

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            R F  +SE N VSW++LI   ++    ++ + +F  +  EG+  NS     V  ACA  
Sbjct: 344 YRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQ 403

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
            NL +G +      + G+ +     +A+V MY KCG +D A++ F    + + V    I+
Sbjct: 404 ANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAII 463

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG-----DLLCGRMCHGYVL 367
           S Y   G A EAL     M  +G RP+ VT ++ ++A +  G         G M   Y +
Sbjct: 464 SGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGV 523

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE--- 423
           +  ++ +D     MID Y + G  + A  + + M      +SW SL+ G   + D++   
Sbjct: 524 KPTIDHYD----CMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGK 579

Query: 424 -SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            +A  +F   PG D   +  +    +    +EEA  + ++M    +K
Sbjct: 580 IAAENLFRLDPG-DTAGYILLFNLYSAFGKWEEAGHVRKLMAERELK 625



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 193/442 (43%), Gaps = 45/442 (10%)

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           KEA     EM +  +     +  C+  AC KL++L  G  +   +       +  + N L
Sbjct: 69  KEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCL 128

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           + MY  CG+    +++F E   +NLV    ++S Y + G   +A+ +  +M   G RP+ 
Sbjct: 129 LRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNS 188

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
              +S + +      L  G+  H +V+R  L    ++   + +MY++CG  E A  +FD 
Sbjct: 189 AVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDG 248

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  +  V+W  L+ G                                TQ    E A+ELF
Sbjct: 249 MDAQNAVTWTGLMVG-------------------------------YTQAKKLEVALELF 277

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
             M  E +++D      V   C  L   D+ + I+++I K G   ++ + T LVD + +C
Sbjct: 278 ARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKC 337

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           GD + A + F R+ + +  +W+A I   +  G  E  +++F  +  +G+  +S ++  V 
Sbjct: 338 GDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVF 397

Query: 581 TACSHGGLVNQGWHLFRSMTDIHG--VSPQIVHY----GCMVDLLGRAGLLGEALDLIKS 634
            AC+    +N G       +  HG  +   +V Y      MV +  + G L  A    +S
Sbjct: 398 QACAAQANLNMG-------SQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFES 450

Query: 635 MPVEPNDVIWGSLLAACQKHQN 656
           +  EP+ V W ++++    H N
Sbjct: 451 ID-EPDAVAWTAIISGYAYHGN 471



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 2/220 (0%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N  L  L+++   +EA +  + M    + V   +   +  ACG L +L   + I+  + +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
              +    +   L+ M+  CG      +VF  M  +++ +W   I A A  G  E+A+ L
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F++M   GI+P+S V++ +L +C     +  G  +   +     ++  I     + ++  
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQ-LNANITVETAICNMYV 234

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           R G L  A  +   M  + N V W  L+    + + +++A
Sbjct: 235 RCGWLEGAKLVFDGMDAQ-NAVTWTGLMVGYTQAKKLEVA 273


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/717 (34%), Positives = 394/717 (54%), Gaps = 53/717 (7%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           +F   + +C  S++      +H  I + G     ++ N L+    + G + + R +FD +
Sbjct: 46  SFAAAIRSCKDSNSVS---IIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             +N+ SW  +I A A R  P  A++LF +M    + P ++T    +SAC+ L +L+ G 
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGR 159

Query: 260 RVCAYID-ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            + A I    G++ + ++  A+  MY KCG + TAK +F     +N+V  N +++ Y + 
Sbjct: 160 EIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQS 219

Query: 319 GLA-REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-- 375
           G +  +AL + ++M  HG RP R T +  + A   +  L      H  ++  GL+ +D  
Sbjct: 220 GHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSL---EKIHARIVETGLQ-FDVR 275

Query: 376 --SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + N +++MY KCG  E+A  IF  M  +  VS N +IA                   
Sbjct: 276 DVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIA------------------- 316

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                          Q+ + +E++++FR M  E +  D  T   V +AC   GAL+  K 
Sbjct: 317 ------------TFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKR 364

Query: 494 IYAYIEKN--GIHC---DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
           I+  + +   G  C   ++ + TALV M+ +CG  ++A  VF+ M  ++  +W A + A 
Sbjct: 365 IHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAAC 424

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
           A +G G++A         +G++ DS  F+ VL ACSH G++   +  F+ M     + P 
Sbjct: 425 AHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPA 484

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
             +Y CMVDLL R+G LG+A +L+ SMP  P+ + W +LL  C+   +++ AA AAE+  
Sbjct: 485 AENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAF 544

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL-PGSSSIEVNGKVHEFTSG 727
            L+P+ +  + LLS++Y++ GK   +  +R  MKE+G+RKL PG S IEV+G+VHEF +G
Sbjct: 545 NLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAG 604

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           D SHP+++ I   L  +N  L+ AG+VP    V+ D+  ++K+ +L+ HSEKLA+AFGLI
Sbjct: 605 DSSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLI 664

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ST   +P+ V+KNLR+C DCH   KL+SK+  R I VRD NRFH F+ G+CSC D+W
Sbjct: 665 STKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 243/538 (45%), Gaps = 67/538 (12%)

Query: 37  GSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKD 96
            ++++CK  N +   H  I + GLG      + +V   A+ G   SL  A+  FD     
Sbjct: 49  AAIRSCKDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHG---SLCEARSIFDAIQHK 105

Query: 97  NETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
           N     +F +N +I  Y+  G    A+ L+ ++    + P   TF   L+AC+       
Sbjct: 106 N-----IFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQR 157

Query: 157 GVQVHGAI-VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           G ++H  I    G    V ++  + + Y +CGD+   + VFD +  +NVVSW +LI A A
Sbjct: 158 GREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYA 217

Query: 216 RRDLP-KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           +      +A+ LF +M E G++P   T V V+ AC  + +LE   ++ A I E G++ + 
Sbjct: 218 QSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLE---KIHARIVETGLQFDV 274

Query: 275 LMV---NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
             V   NAL++MY KCG+++ A+ +F + + R+ V  N +++ + + GL +E++ +  EM
Sbjct: 275 RDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREM 334

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID-----MYM 386
            L G   D  T  S ++A +  G L  G+  H  V+   L     + N +++     MY 
Sbjct: 335 DLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYG 394

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG  E A  +F  M+ K  VSWN+                               ML  
Sbjct: 395 KCGTLEQAKAVFKAMTTKNSVSWNA-------------------------------MLAA 423

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
              +   +EA    R    E +++D  + + V  AC + G L++     AY     +  D
Sbjct: 424 CAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEV-----AYDHFQLMLSD 478

Query: 507 MQLATA------LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
             L  A      +VD+ AR G    A ++   M    D  AW   +G   ++G+ E A
Sbjct: 479 FDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENA 536


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/712 (34%), Positives = 375/712 (52%), Gaps = 32/712 (4%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +L D      V+    K+     G Q+H  ++  G+    F+ N L+N Y +CG++    
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           ++FD M +RN+VSWT++I   ++     EA+  F  M   G  P        I ACA L 
Sbjct: 61  KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           ++E+G ++     + G+ +   + + L DMY KCGA+  A ++F E   ++ V    ++ 
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y ++G   EAL    +M+      D+  + S + A   L     GR  H  V++ G E 
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS-EM 432
              + N + DMY K G                               D+ESA  VF  + 
Sbjct: 241 DIFVGNALTDMYSKAG-------------------------------DMESASNVFGIDS 269

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             R+ +S+  ++ G  +    E+ + +F  +  + I+ +  T   +  AC    AL+   
Sbjct: 270 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 329

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            ++A + K     D  +++ LVDM+ +CG  + A+Q F  +      AW + +      G
Sbjct: 330 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHG 389

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G+ A++ F  M+ +G+KP++I F+ +LT CSH GLV +G   F SM   +GV P   HY
Sbjct: 390 LGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY 449

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            C++DLLGRAG L EA + I  MP EPN   W S L AC+ H + ++   AAE++ +L+P
Sbjct: 450 SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEP 509

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           + SG  VLLSNIYA+  +W +V  VR++M++  ++KLPG S ++V  K H F + D SH 
Sbjct: 510 KNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHX 569

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
             + I   L  +  +++ AGYVP   +V LD+D+  K+ LL  HSE++A+AF LIS    
Sbjct: 570 RKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIG 629

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PI V KNLR+C DCHS  K +SKV  R+IIVRDN+RFH F  GSCSC D+W
Sbjct: 630 KPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 224/478 (46%), Gaps = 43/478 (8%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L +A K FD   + N     L  + ++I G S      EAI  +  +   G +P +F F 
Sbjct: 56  LDHALKLFDTMPQRN-----LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFS 110

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
             + AC    +   G Q+H   +K G   ++FV + L + Y +CG + D  +VF+EM  +
Sbjct: 111 SAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK 170

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + VSWT++I   ++    +EA+  F +M++E +  +   +   + AC  L+  + G  V 
Sbjct: 171 DEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVH 230

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG---ECKDRNLVLCNTIMSNYVRLG 319
           + + +LG +++  + NAL DMY K G +++A  +FG   EC  RN+V    ++  YV   
Sbjct: 231 SSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC--RNVVSYTCLIDGYVETE 288

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              + L++  E+   G  P+  T  S + A A    L  G   H  V++   +    + +
Sbjct: 289 QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS 348

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++DMY KCG  E A + FD + + T ++WNSL++             VF          
Sbjct: 349 ILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVS-------------VFG--------- 386

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYI 498
                    Q  + ++A++ F  M+   +K + +T + + + C + G ++    + Y+  
Sbjct: 387 ---------QHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMD 437

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +  G+    +  + ++D+  R G  + A +   RM  + +   W + +GA  + G+ E
Sbjct: 438 KTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 123/231 (53%), Gaps = 14/231 (6%)

Query: 80  FESLTYAQKAF-DYYIK--DNETSATLFMYNSLIR---GYSCIGLGV-------EAISLY 126
           FES  +   A  D Y K  D E+++ +F  +S  R    Y+C+  G        + +S++
Sbjct: 238 FESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVF 297

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
           VEL   GI P++FTF  ++ AC   +A  +G Q+H  ++K+ FD D FV + L++ YG+C
Sbjct: 298 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC 357

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           G +    + FDE+ +   ++W SL+    +  L K+A+  F  MV+ G+KPN++T + ++
Sbjct: 358 GLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLL 417

Query: 247 SACAKLQNLELG-DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           + C+    +E G D   +     G+       + ++D+  + G +  AK+ 
Sbjct: 418 TGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEF 468


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/643 (36%), Positives = 355/643 (55%), Gaps = 43/643 (6%)

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW   +   A + L  E++ L+  M+  G  P++ +   ++ +CA L     G ++  ++
Sbjct: 17  SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNLVLC-NTIMSNYVRLGLARE 323
              G +A   ++ AL+ MY KCG V+ A+++F E      L +C N ++S Y       +
Sbjct: 77  IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           A  +   M   G   D VT+L  V        L  GR  HG  ++ G     ++ N+ I 
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MYMKCG                                VES R +F EMP +  I+WN +
Sbjct: 197 MYMKCG-------------------------------SVESGRRLFDEMPVKGLITWNAV 225

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G +Q  +  + +ELF  M S  +  D  T+V V S+C +LGA  + + +   +E NG 
Sbjct: 226 ISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGF 285

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             ++ L+ AL+ M+ARCG+  +A  VF  M  + + +WTA IG   M G GE  + LF++
Sbjct: 286 APNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDD 345

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M+++GI+PD  VFV VL+ACSH GL ++G  LFR+M   + + P   HY C+VDLLGRAG
Sbjct: 346 MIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 405

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L EA++ I SMPVEP+  +WG+LL AC+ H+NVD+A  A  ++ E +P   G +VL+SN
Sbjct: 406 RLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSN 465

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           IY+ +     + R+R+ M+E+  RK PG S +E  GKVH F +GD SH +   +  ML E
Sbjct: 466 IYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDE 525

Query: 744 MNCRLRD-AGYVPDLTNVLLDVDE-QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
           +   + + AG         +D D  +E       HSE+LA+AFG++++     I V+KNL
Sbjct: 526 LETSVMELAGN--------MDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNL 577

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH F KLVSK+ DR  +VRD +RFH+F+ G CSC D+W
Sbjct: 578 RVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 226/477 (47%), Gaps = 37/477 (7%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           +++++  ++T   +N  +R  +   L  E+ISLY  +   G  PD F+FPF+L +C   S
Sbjct: 7   FVRNSAVAST--SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLS 64

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE--MSERNVVSWTSL 210
               G Q+H  +++ G + + FV   LI+ Y +CG + D R+VF+E   S +  V + +L
Sbjct: 65  LPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNAL 124

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I          +A ++F  M E G+  +SVT++ ++  C   + L LG  +     + G 
Sbjct: 125 ISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGT 184

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
            +   ++N+ + MYMKCG+V++ ++LF E   + L+  N ++S Y + GLA + L + ++
Sbjct: 185 YSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQ 244

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M   G  PD  T++S +S+ A LG    G+     V  NG      + N +I MY +CG 
Sbjct: 245 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGN 304

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  +FD M  K++VSW +                               M+G     
Sbjct: 305 LAKARAVFDIMPVKSLVSWTA-------------------------------MIGCYGMH 333

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQL 509
            M E  + LF  M+   I+ D    V V SAC + G  D    ++  +++   +    + 
Sbjct: 334 GMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 393

Query: 510 ATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
            + LVD+  R G    AM+    M  + D + W A +GA  +  N + A   F +++
Sbjct: 394 YSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI 450



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 224/468 (47%), Gaps = 23/468 (4%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLN---ELKQPHCHILKQGLGHKPSYIS 68
           L T +++   +  ++ ++P        LK+C +L+     +Q HCH+++ G   +P  ++
Sbjct: 30  LFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLT 89

Query: 69  KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM-YNSLIRGYSCIGLGVEAISLYV 127
            ++    + G  E    A+K F+    +N  S+ L + YN+LI GY+      +A  ++ 
Sbjct: 90  ALISMYCKCGLVED---ARKVFE----ENPHSSQLGVCYNALISGYTANSKVSDAAFMFR 142

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +   G+  D  T   ++  CT       G  +HG  VK G   +V V N  I  Y +CG
Sbjct: 143 RMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCG 202

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
            +  GRR+FDEM  + +++W ++I   ++  L  + + LF +M   G+ P+  T+V V+S
Sbjct: 203 SVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLS 262

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
           +CA L   ++G  V   ++  G   N  + NAL+ MY +CG +  A+ +F     ++LV 
Sbjct: 263 SCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVS 322

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDR---VTMLSAVSASA--QLGDLLCGRMC 362
              ++  Y   G+    L + D+M+  G RPD    V +LSA S S     G  L   M 
Sbjct: 323 WTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMK 382

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGD 421
             Y L  G E +    + ++D+  + G+ + A    D M        W +L+     + +
Sbjct: 383 REYKLEPGPEHY----SCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKN 438

Query: 422 VESAREVFSEMPGRD--HISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           V+ A   F+++   +  +I +  ++  +  ++  +E +   RVM+ ER
Sbjct: 439 VDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER 486


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/692 (35%), Positives = 392/692 (56%), Gaps = 60/692 (8%)

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F+     NV  +TS++   +      + V ++ +M   G++P++     +I +      
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG-- 113

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD--RNLVLCNTIM 312
              G    A++ +LG  ++A + NA++DMY + G +  A+++F E  D  R +   N ++
Sbjct: 114 ---GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           S Y +     +A  + D M    P  + +T  + V+  A++ DL   R     +    + 
Sbjct: 171 SGYWKWESEGQAQWLFDVM----PERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVV 226

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV----VSWNSLI------------AGL 416
            W    N M+  Y + G  E A R+FD M N  +     +W ++I            A L
Sbjct: 227 SW----NAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASL 282

Query: 417 IKN-----------------------GDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           ++                        GD++SAR++F+ MPGR+ ++WN+M+ G  Q    
Sbjct: 283 VRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQS 342

Query: 454 EEAMELFRVMLS-ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
             A+ELF+ M++ +++  D VTMV V SACG+LGAL+L  W+  ++ +N I   +    A
Sbjct: 343 AMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNA 402

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           ++ M++RCG  + A +VF+ M  RDV ++   I   A  G+G +A+ L + M   GI+PD
Sbjct: 403 MIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPD 462

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + F+GVLTACSH GL+ +G  +F S+ D     P I HY CMVDLLGR G L +A   +
Sbjct: 463 RVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTM 517

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           + MP+EP+  ++GSLL A + H+ V++   AA ++ EL+P+ SG  +LLSNIYASAG+W 
Sbjct: 518 ERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWK 577

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
           +V R+R  MK+ G++K  G S +E  GK+H+F   D SH   ++I  +L E+  ++R+AG
Sbjct: 578 DVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAG 637

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y+ D + VL DV+E+EK+ ++  HSEKLA+ + L+ +     IRVVKNLR+C DCH+  K
Sbjct: 638 YIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIK 697

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++SK+  R IIVRDNNRFH F  G CSC D+W
Sbjct: 698 MISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 250/555 (45%), Gaps = 112/555 (20%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
             N L+Q H  I+   L H   +++ ++  C ++        A   + + + ++  +  +
Sbjct: 13  NFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRL-------RAPPHYTHLLFNSTLNPNV 65

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F++ S++R YS +    + + +Y ++ G G+ PD F +P ++    KS+  G G+  H  
Sbjct: 66  FVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILI----KSAGTG-GIGFHAH 120

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE------------------------- 198
           ++K+G   D FV N +I+ Y   G I   R+VFDE                         
Sbjct: 121 VLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEG 180

Query: 199 --------MSERNVVSWTSLICA--------CARR-----------------------DL 219
                   M ERNV++WT+++           ARR                        L
Sbjct: 181 QAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL 240

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            +EA+ LF EMV  GI+P+  T V VISAC+   +  L   +   + +  ++ N  +  A
Sbjct: 241 AEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTA 300

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RP 338
           L+DMY K G +D+A++LF     RN+V  N++++ Y + G +  A+ +  EM+      P
Sbjct: 301 LLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTP 360

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D VTM+S +SA   LG L  G     ++  N ++   S  N MI MY +CG  E A R+F
Sbjct: 361 DEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVF 420

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             M+ + VVS+N+LI+G   +G                         G+       EA+ 
Sbjct: 421 QEMATRDVVSYNTLISGFAAHGH------------------------GV-------EAIN 449

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           L   M    I+ DRVT +GV +AC + G L+  + ++  I+   I         +VD+  
Sbjct: 450 LMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAI----DHYACMVDLLG 505

Query: 519 RCGDPQRAMQVFRRM 533
           R G+ + A +   RM
Sbjct: 506 RVGELEDAKRTMERM 520


>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 558

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/516 (42%), Positives = 302/516 (58%), Gaps = 35/516 (6%)

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           +M + G  PD  T    + A A+L     G   H  + + G +    + N +I  Y  CG
Sbjct: 77  KMAMAGVSPDHFTFPFVLKACARLQ---TGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCG 133

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             + A ++F+                               EMP RD +SW++M+    +
Sbjct: 134 FLDFALKVFE-------------------------------EMPERDLVSWSSMIACFAK 162

Query: 450 ENMFEEAMELF-RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
                EA+ LF R+ L   +K D V ++ V SA   LG L+L KWI  +I +NG+   + 
Sbjct: 163 NGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVS 222

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           L TALVDMF+RCG  + +M+VF  M +R+V  WTA I  +A+ G   +A+ +F EM   G
Sbjct: 223 LGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHG 282

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
            +PD + F GVL ACSHGGLV++GWH+F S+ + +G+ P   HYGCMVDLLGRAGLL EA
Sbjct: 283 FQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEA 342

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
              +  MP+ PN +IW +LL AC  H  +++A    E+I ELD    G +VLLSN+Y   
Sbjct: 343 CKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGV 402

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
           G+W   A VR  M+E+ I K PG S I VN  +HEF +GD +HP+  +I   L  M   L
Sbjct: 403 GRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSL 462

Query: 749 RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
           +  GY PD++NVL D++E+EK+  L +HSEKLA+AF L+    +  IRV+KNLR+C DCH
Sbjct: 463 KVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCH 522

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            F K  S V++REII+RD NRFH F +GSCSC D+W
Sbjct: 523 CFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 212/389 (54%), Gaps = 17/389 (4%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           +N + + H  +LK G  + P  + +++ +CA      SL+YA+  FD  I   +T    F
Sbjct: 1   MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAP-ASLSYARSIFDL-IAFPDT----F 54

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +N++IR ++       ++SL+ ++A  G+ PD FTFPFVL AC +      G+ +H  +
Sbjct: 55  AFNTIIRAHADSSP-SFSLSLFSKMAMAGVSPDHFTFPFVLKACARLQT---GLDLHSLL 110

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            K+GFD DV+V+N LI+FYG CG +    +VF+EM ER++VSW+S+I   A+     EA+
Sbjct: 111 FKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEAL 170

Query: 225 YLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            LF  M   G +KP+ V ++ V+SA + L +LELG  +  +I   G++    +  ALVDM
Sbjct: 171 ALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDM 230

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           + +CG ++ + ++F E  +RN++    +++     G + EAL +  EM  HG +PD VT 
Sbjct: 231 FSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTF 290

Query: 344 LSAVSASAQLGDLLCGRMCHGY-VLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
              + A +  G  L     H +  +RN  G+E        M+D+  + G    AC+  D 
Sbjct: 291 TGVLVACSHGG--LVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDG 348

Query: 401 MSNK-TVVSWNSLIAGLIKNGDVESAREV 428
           M  +   + W +L+   + +  +E A +V
Sbjct: 349 MPIRPNSIIWRTLLGACVNHNYIELAEKV 377



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 147/280 (52%), Gaps = 9/280 (3%)

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R +FD ++  +  ++ ++I A A             +M   G+ P+  T   V+ ACA+
Sbjct: 41  ARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFS-KMAMAGVSPDHFTFPFVLKACAR 99

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           LQ    G  + + + +LG  ++  + N L+  Y  CG +D A ++F E  +R+LV  +++
Sbjct: 100 LQT---GLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSM 156

Query: 312 MSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++ + + G   EALA+   M L G  +PD V +LS VSA + LGDL  G+   G++ RNG
Sbjct: 157 IACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNG 216

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           LE   S+   ++DM+ +CG  E + R+FD M  + V++W +LI GL  +G    A  +F 
Sbjct: 217 LEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFY 276

Query: 431 EMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           EM       DH+++  +L   +   +  E   +F  + +E
Sbjct: 277 EMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNE 316


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/610 (36%), Positives = 349/610 (57%), Gaps = 32/610 (5%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           ++P+      ++  C +L  L+ G  V  ++     K + ++ N+L+ MY +CG+++ A+
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           +LF E   R++V   ++++ Y +   A +AL +   ML  G  P+  T+ S V     + 
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
              CGR  H    + G      + ++++DMY +CG    A  +FD +  K          
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCK---------- 239

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                                + +SWN ++ G  ++   EEA+ LF  M  E  +    T
Sbjct: 240 ---------------------NEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFT 278

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              + S+C  +G L+  KW++A++ K+       +   L+ M+A+ G  + A +VF ++ 
Sbjct: 279 YSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLV 338

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
           K DV +  + +   A  G G++A + F+EM+R GI+P+ I F+ VLTACSH  L+++G H
Sbjct: 339 KVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKH 398

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F  M   + + P++ HY  +VDLLGRAGLL +A   I+ MP+EP   IWG+LL A + H
Sbjct: 399 YFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +N ++ AYAA+R+ ELDP   G H LL+NIYASAG+W +VA+VR  MK+ G++K P  S 
Sbjct: 458 KNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSW 517

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           +EV   VH F + D +HP+   I  M  ++N ++++ GYVPD ++VLL VD+QEK+  L 
Sbjct: 518 VEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQ 577

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEKLA++F L++T     IR++KN+R+C DCHS  K VS V  REIIVRD NRFH F 
Sbjct: 578 YHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFC 637

Query: 835 QGSCSCSDFW 844
            G CSC D+W
Sbjct: 638 DGFCSCGDYW 647



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 32/421 (7%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD+  +  +L  CT+     EG  VH  ++   F  D+ ++N L+  Y  CG +   RR+
Sbjct: 72  PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRL 131

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FDEM  R++VSWTS+I   A+ D   +A+ LF  M+ +G +PN  T+  ++  C  + + 
Sbjct: 132 FDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASY 191

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
             G ++ A   + G  +N  + ++LVDMY +CG +  A  +F +   +N V  N +++ Y
Sbjct: 192 NCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGY 251

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            R G   EALA+   M   G RP   T  + +S+ + +G L  G+  H +++++  +   
Sbjct: 252 ARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVG 311

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + NT++ MY K G    A ++FD +    VVS NS++ G  ++G               
Sbjct: 312 YVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHG--------------- 356

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                   LG        +EA + F  M+   I+ + +T + V +AC +   LD  K  +
Sbjct: 357 --------LG--------KEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYF 400

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNG 554
             + K  I   +     +VD+  R G   +A      M  +  V+ W A +GA  M  N 
Sbjct: 401 GLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNT 460

Query: 555 E 555
           E
Sbjct: 461 E 461



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 197/403 (48%), Gaps = 16/403 (3%)

Query: 39  LKNCKTLNELKQP---HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C  L +LK+    H H+L     H     + ++   A+ G+ E    A++ FD    
Sbjct: 81  LKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEG---ARRLFDEMPH 137

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S T     S+I GY+      +A+ L+  +   G  P++FT   ++  C   +++ 
Sbjct: 138 RDMVSWT-----SMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYN 192

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G Q+H    K G   +VFV + L++ Y  CG + +   VFD++  +N VSW +LI   A
Sbjct: 193 CGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYA 252

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           R+   +EA+ LF  M  EG +P   T   ++S+C+ +  LE G  + A++ +   K    
Sbjct: 253 RKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGY 312

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + N L+ MY K G++  A+++F +    ++V CN+++  Y + GL +EA    DEM+  G
Sbjct: 313 VGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFG 372

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
             P+ +T LS ++A +    L  G+   G + +  +E   S   T++D+  + G  + A 
Sbjct: 373 IEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAK 432

Query: 396 RIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMP 433
              + M    TV  W +L+     + + E    +A+ VF   P
Sbjct: 433 SFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDP 475



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 176/379 (46%), Gaps = 65/379 (17%)

Query: 314 NYVRLGL-AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           N +R  L ++  L +LD +      PDR    + +    QLG L  G++ H +VL +  +
Sbjct: 47  NLLRPSLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFK 106

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               I N+++ MY +CG  E A R+FD M ++ +VSW S+I G  +N             
Sbjct: 107 HDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQN------------- 153

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                             +   +A+ LF  MLS+  + +  T+  +   CGY+ + +  +
Sbjct: 154 ------------------DRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGR 195

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I+A   K G H ++ + ++LVDM+ARCG    AM VF ++  ++  +W A I   A +G
Sbjct: 196 QIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKG 255

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-W---HLFRSMTDIHG-VSP 607
            GE+A+ LF  M R+G +P    +  +L++CS  G + QG W   HL +S   + G V  
Sbjct: 256 EGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGN 315

Query: 608 QIVH-----------------------YGCMVDLLGRA--GLLGEA---LDLIKSMPVEP 639
            ++H                         C   L+G A  GL  EA    D +    +EP
Sbjct: 316 TLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEP 375

Query: 640 NDVIWGSLLAACQKHQNVD 658
           ND+ + S+L AC   + +D
Sbjct: 376 NDITFLSVLTACSHARLLD 394


>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 649

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/522 (41%), Positives = 317/522 (60%), Gaps = 1/522 (0%)

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           +L +   ML      +  T  S + A + L  L      H  + + G E      N++I+
Sbjct: 128 SLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLIN 187

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
            Y   G  ++A  +FD +     VSWNS+I G  K G ++ A  +F +M  ++ ISW TM
Sbjct: 188 SYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTM 247

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G  Q  M +EA++LF  M +  ++ D V++    SAC  LGAL+  KWI++Y+ K  I
Sbjct: 248 ISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRI 307

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D  L   L+DM+A+CGD   A++VF+ ++++ V AWTA I   A  G+G +A+  F E
Sbjct: 308 RMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFME 367

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M + GIKP+ I F  VLTACS+ GLV +G  +F +M   + + P I HYGC+VDLL RAG
Sbjct: 368 MQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAG 427

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
           LL EA   I+ MP++PN VIWG+LL AC+ H+N+++     E +  +DP   G +V  +N
Sbjct: 428 LLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKAN 487

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           I+A   KW   A  R  MKEQG+ K+PG S+I + G  HEF +GD SHPE+  I S  + 
Sbjct: 488 IHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWKI 547

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH-HSEKLAMAFGLISTSKTMPIRVVKNLR 802
           M  +L + GYVP+L ++LLD+ + +++  + H HSEKLA+ +GLI T     IR++KNLR
Sbjct: 548 MRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKTKPGTTIRIMKNLR 607

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH   KL+SK+Y R+I++RD  RFH FR G CSC D+W
Sbjct: 608 VCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 202/424 (47%), Gaps = 46/424 (10%)

Query: 42  CKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
           C    ELKQ H  +LK GL      I+K +  C    + + L YAQ  FD + + +    
Sbjct: 53  CSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPD---- 108

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
             F++N +IRG+SC      ++ LY  +       + +TFP +L AC+  SA  E  Q+H
Sbjct: 109 -TFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIH 167

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD------------------------ 197
             I K+G++ DV+  N LIN Y   G+      +FD                        
Sbjct: 168 AQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMD 227

Query: 198 -------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
                  +M E+N +SWT++I    +  + KEA+ LF EM    ++P++V++   +SACA
Sbjct: 228 IALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACA 287

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
           +L  LE G  + +Y+ +  ++ ++++   L+DMY KCG +  A ++F   + +++     
Sbjct: 288 QLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTA 347

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA-----QLGDLLCGRMCHGY 365
           ++S Y   G  REA++   EM   G +P+ +T  + ++A +     + G L+   M   Y
Sbjct: 348 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDY 407

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNGDVES 424
            L+  +E +  +    +D+  + G  + A R    M  K   V W +L+     + ++E 
Sbjct: 408 NLKPTIEHYGCV----VDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 463

Query: 425 AREV 428
             E+
Sbjct: 464 GEEI 467



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 203/448 (45%), Gaps = 46/448 (10%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCL 179
           E   ++  +   G++ D +     L+ C  S++       +  IV  GFDR D F+ N +
Sbjct: 58  ELKQIHARMLKTGLIQDSYAITKFLSCCISSTS--SDFLPYAQIVFDGFDRPDTFLWNLM 115

Query: 180 INFYGECGD-----IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           I  +  C D     ++  +R+    +  N  ++ SL+ AC+     +E   +  ++ + G
Sbjct: 116 IRGFS-CSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLG 174

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
            + +   +  +I++ A   N +L   +   I     K +A+  N+++  Y K G +D A 
Sbjct: 175 YENDVYAVNSLINSYAATGNFKLAHLLFDRIP----KPDAVSWNSVIKGYAKAGKMDIAL 230

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            LF +  ++N +   T++S YV+ G+ +EAL +  EM      PD V++ +A+SA AQLG
Sbjct: 231 TLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 290

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            L  G+  H Y+ +  +     +   +IDMY KCG    A  +F ++  K+V +W +LI+
Sbjct: 291 ALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALIS 350

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G   +G             GR                   EA+  F  M    IK + +T
Sbjct: 351 GYAYHGH------------GR-------------------EAISKFMEMQKMGIKPNVIT 379

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
              V +AC Y G ++  K I+  +E++  +   ++    +VD+ +R G    A +  + M
Sbjct: 380 FTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEM 439

Query: 534 E-KRDVSAWTAAIGAMAMEGNGEQAVEL 560
             K +   W A + A  +  N E   E+
Sbjct: 440 PLKPNAVIWGALLKACRIHKNIELGEEI 467



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 33/303 (10%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
           H A T P     + +  N   L E  Q H  I K G  +    ++ ++ + A  G F+  
Sbjct: 142 HNAYTFPS---LLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFK-- 196

Query: 84  TYAQKAFDYYIKDNETS-----------------ATLFM---------YNSLIRGYSCIG 117
             A   FD   K +  S                  TLF          + ++I GY   G
Sbjct: 197 -LAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAG 255

Query: 118 LGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN 177
           +  EA+ L+ E+    + PD  +    L+AC +  A  +G  +H  + K     D  +  
Sbjct: 256 MHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGC 315

Query: 178 CLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
            LI+ Y +CGD+ +   VF  +  ++V +WT+LI   A     +EA+  F EM + GIKP
Sbjct: 316 VLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 375

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYID-ELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           N +T   V++AC+    +E G  +   ++ +  +K        +VD+  + G +D AK+ 
Sbjct: 376 NVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRF 435

Query: 297 FGE 299
             E
Sbjct: 436 IQE 438


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/716 (35%), Positives = 395/716 (55%), Gaps = 50/716 (6%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIV--KMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
           T+  +  AC + S+  EG  +H  +       D ++F+ N ++N Y +CG +    ++FD
Sbjct: 65  TYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFD 124

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
           EM E+N+VSWT+L+   A+     E   +F  M+    +P       VISAC    N   
Sbjct: 125 EMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWH-QPTEFAFASVISACGGDDNC-- 181

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMK-CGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
           G +V A   +    +   + NAL+ MY K CG  D A  ++     RNLV  N++++ + 
Sbjct: 182 GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQ 241

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
             G    AL +  +M + G R DR T++S  S    +GD              GLE    
Sbjct: 242 VCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGD--------------GLE---- 283

Query: 377 ICNTMIDMYMKCG---KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
            C  +  + +K G   K E+A  +        V +++SL       G+V     +F E+ 
Sbjct: 284 CCFQLQCLTIKTGFILKIEVATAL--------VKAYSSL------GGEVSDCYRIFLELD 329

Query: 434 GR-DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           GR D +SW  ++    + +  ++A+ +FR  L E +  DR     V  AC  L     A 
Sbjct: 330 GRQDVVSWTGIIAAFAERDP-KKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHAL 388

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            + +++ K G   D+ LA AL+   ARCG    + QVF +M  RD  +W + + A AM G
Sbjct: 389 TVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHG 448

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G++A+ LF++M  Q   PD   FV +L+ACSH G+  +G  +F +M++ HG+ PQ+ HY
Sbjct: 449 QGKEALLLFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHY 505

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CMVD+LGRAG + EA +LI  MP+EP+ V+W +LL +C+KH    +A  AA ++ ELDP
Sbjct: 506 ACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDP 565

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
             S  +VL+SNI+ + G++     +R +M+ + +RK PG S IEV  +VHEF SG + HP
Sbjct: 566 NNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHP 625

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           E   I + L E+  RL+D GYVP ++  L D++++ K+  L +HSEKLA+AF L++    
Sbjct: 626 EKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSI 685

Query: 793 M----PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
                 I+++KN+R+C DCH+F KL S++ D EI+VRD+NRFH F+   CSC+D+W
Sbjct: 686 CCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 171/368 (46%), Gaps = 34/368 (9%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA-CTKSSAFGEGVQV 160
            L  +NS+I G+   G G  A+ L+ ++   GI  D+ T   + +  C          Q+
Sbjct: 229 NLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQL 288

Query: 161 HGAIVKMGFDRDVFVENCLINFYGEC-GDIVDGRRVFDEMSER-NVVSWTSLICACARRD 218
               +K GF   + V   L+  Y    G++ D  R+F E+  R +VVSWT +I A A RD
Sbjct: 289 QCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERD 348

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
            PK+A+ +F + + E + P+      V+ ACA L        V +++ ++G + + ++ N
Sbjct: 349 -PKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLAN 407

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           AL+    +CG+V  +KQ+F +   R+ V  N+++  Y   G  +EAL +  +M     +P
Sbjct: 408 ALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQP 464

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT------------MIDMYM 386
           D  T ++ +SA +  G           +   G + ++++ N             M+D+  
Sbjct: 465 DGATFVALLSACSHAG-----------MAEEGAKIFETMSNNHGIVPQLDHYACMVDILG 513

Query: 387 KCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
           + G+   A  + D M      V W++L+    K+G+ + A+    ++   D    N  LG
Sbjct: 514 RAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDP---NNSLG 570

Query: 446 GLTQENMF 453
            +   N+F
Sbjct: 571 YVLMSNIF 578



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 27/194 (13%)

Query: 54  HILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGY 113
           H+LK G        + ++  CA+ G   S+  +++ FD     +  S     +NS+++ Y
Sbjct: 393 HVLKVGFEDDIVLANALIHACARCG---SVALSKQVFDKMGSRDTVS-----WNSMLKAY 444

Query: 114 SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQV-------HGAIVK 166
           +  G G EA+ L+ ++      PD  TF  +L+AC+ +    EG ++       HG + +
Sbjct: 445 AMHGQGKEALLLFSQMDA---QPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQ 501

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARRDLPKEAVY 225
           +    D +   C+++  G  G I + + + D+M  E + V W++L+ +C +    K A  
Sbjct: 502 L----DHYA--CMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKL 555

Query: 226 LFFEMVEEGIKPNS 239
              ++ E  + PN+
Sbjct: 556 AAVKLKE--LDPNN 567


>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/620 (38%), Positives = 360/620 (58%), Gaps = 67/620 (10%)

Query: 237 PNSVTM-----------VCVISACAKLQNLELGDRVCAYIDELGM-----KANALMVNAL 280
           PNS+T+           + +I  C++ + L+   ++ A +   G+      A+ L+  A 
Sbjct: 22  PNSITLNNDRYFANHPTLSLIDQCSETKQLK---QIHAQMLRTGLFFDPFSASRLITAAA 78

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR-PD 339
           +  +    ++D A+Q+F +    NL   NT++  Y       ++L I   ML   P  PD
Sbjct: 79  LSPF---PSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPD 135

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           + T    + A+++L +L  G+  HG V++  L     I N++I  Y KCG+  +  R   
Sbjct: 136 KFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYR--- 192

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
                                       VF   P RD +SWN+M+    Q    EEA+EL
Sbjct: 193 ----------------------------VFVNXPRRDVVSWNSMITAFVQGGCPEEALEL 224

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F+ M ++ +K + +TMVGV SAC      +  +W+++YIE+N I   + L+ A++DM+ +
Sbjct: 225 FQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTK 284

Query: 520 CGDPQRAMQVFRRMEKRDVSAWT------AAIG------AMAMEGNGEQAVELFNEMLRQ 567
           CG  + A ++F +M ++D+ +WT      A IG       +AM G+G+ A+ LF++M   
Sbjct: 285 CGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQED 344

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
            +KP+++ F  +L ACSH GLV +G   F  M  ++GV P + HY CMVD+LGRAGLL E
Sbjct: 345 KVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEE 404

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A++LI+ MP+ P   +WG+LL AC  H+NV +A  A  ++ EL+P   G +VLLSNIYA 
Sbjct: 405 AVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAK 464

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
           AGKW  V+ +R  M++ G++K PG SSIEV+G VHEF  GD SHP    I + L E+  R
Sbjct: 465 AGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVAR 524

Query: 748 LRDAGYVPDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCD 806
           L   GYVP+ +++L  V+E++ K+  L  HSEKLA+AFGLIST ++ PIR+VKNLR+C D
Sbjct: 525 LETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGD 584

Query: 807 CHSFAKLVSKVYDREIIVRD 826
           CHS AKLVSK+YDREI++RD
Sbjct: 585 CHSVAKLVSKLYDREILLRD 604



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 231/451 (51%), Gaps = 35/451 (7%)

Query: 7   PSPLVLATPTVTTLTNQHKAKTTPKDS------PSIGSLKNCKTLNELKQPHCHILKQGL 60
           P+P +++ P   +L   +    T  +       P++  +  C    +LKQ H  +L+ GL
Sbjct: 4   PNPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGL 63

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
              P   S+++ T A +  F SL YAQ+ FD     N     L+ +N+LIR Y+      
Sbjct: 64  FFDPFSASRLI-TAAALSPFPSLDYAQQVFDQIPHPN-----LYTWNTLIRAYASSSNPH 117

Query: 121 EAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
           +++ +++  L      PDKFTFPF++ A ++      G   HG ++K+    DVF+ N L
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           I+FY +CG++  G RVF     R+VVSW S+I A  +   P+EA+ LF EM  + +KPN 
Sbjct: 178 IHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNG 237

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           +TMV V+SACAK  + E G  V +YI+   +  +  + NA++DMY KCG+V+ AK+LF +
Sbjct: 238 ITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDK 297

Query: 300 CKDRNLVLCNTIMSNYVRL------------GLAREALAILDEMLLHGPRPDRVTMLSAV 347
             ++++V   T++  Y ++            G  ++A+A+  +M     +P+ VT  + +
Sbjct: 298 MPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNIL 357

Query: 348 SASAQLGDLLCGRMCHG-----YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            A + +G +  GR         Y +  G++ +      M+D+  + G  E A  + + M 
Sbjct: 358 CACSHVGLVEEGRTFFNQMELVYGVLPGVKHY----ACMVDILGRAGLLEEAVELIEKMP 413

Query: 403 NKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
                S W +L+     + +V  A +  S++
Sbjct: 414 MAPAASVWGALLGACTIHENVVLAEQACSQL 444



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 200/407 (49%), Gaps = 27/407 (6%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+H  +++ G   D F  + LI          +   ++VFD++   N+ +W +LI A A 
Sbjct: 53  QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112

Query: 217 RDLPKEAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              P +++ +F  M+ +    P+  T   +I A ++L+ L  G      + ++ + ++  
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVF 172

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           ++N+L+  Y KCG +    ++F     R++V  N++++ +V+ G   EAL +  EM    
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN 232

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            +P+ +TM+  +SA A+  D   GR  H Y+ RN +    ++ N M+DMY KCG  E A 
Sbjct: 233 VKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAK 292

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           R+FD M  K +VSW +++ G  K G+ ++A+                   GL      ++
Sbjct: 293 RLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQ-------------------GLAMHGHGKD 333

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALV 514
           A+ LF  M  +++K + VT   +  AC ++G ++  +  +  +E   G+   ++    +V
Sbjct: 334 AIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMV 393

Query: 515 DMFARCGDPQRAMQVFRRMEKRD-VSAWTAAIGAMAMEGN---GEQA 557
           D+  R G  + A+++  +M      S W A +GA  +  N    EQA
Sbjct: 394 DILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQA 440


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/705 (34%), Positives = 383/705 (54%), Gaps = 61/705 (8%)

Query: 133 GILPDKFTFPFVLNACT--KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G  PD   FP VL +CT  K   FGE   VHG I+++G   D++  N L+N Y +   + 
Sbjct: 5   GKYPDHNVFPSVLKSCTLMKDLRFGE--SVHGCIIRLGMGFDLYTCNALMNMYSKFWSLE 62

Query: 191 DG--RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           +G  +R  D      +     +       DLP E      +    GI  N          
Sbjct: 63  EGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCE-----LDERVAGIDQNG--------D 109

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
             ++ N+         + + G  ++          Y+      + +++F     R++V  
Sbjct: 110 LNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYL-----GSLRKVFEMMPKRDIVSW 164

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           NT++S   + G+  +AL ++ EM     RPD  T+ S +   A+  +LL G+  HGY +R
Sbjct: 165 NTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR 224

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           NG +    I +++IDMY KC + + +CR                               V
Sbjct: 225 NGYDADVFIGSSLIDMYAKCTRVDDSCR-------------------------------V 253

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           F  +P  D ISWN+++ G  Q  MF+E ++ F+ ML  +IK + V+   +  AC +L  L
Sbjct: 254 FYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTL 313

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
            L K ++ YI ++    ++ +A+ALVDM+A+CG+ + A  +F +ME  D+ +WTA I   
Sbjct: 314 HLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGY 373

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
           A+ G+   A+ LF  M  +G+KP+ + F+ VLTACSH GLV++ W  F SMT  + + P 
Sbjct: 374 ALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPG 433

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
           + HY  + DLLGR G L EA + I  M +EP   +W +LLAAC+ H+N+++A   ++++ 
Sbjct: 434 LEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLF 493

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
            +DP+  G +VLLSNIY++AG+W +  ++R+ M+++G++K P  S IE+  KVH F +GD
Sbjct: 494 TVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGD 553

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
           +SHP  + I+  L+ +  ++   GYV D T VL DV+E++K+YLL  HSE+LA+ FG+IS
Sbjct: 554 KSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIIS 613

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
           T     IRV KNLR+C DCH+  K +SK+  REI+      F+FF
Sbjct: 614 TPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV------FYFF 652



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 167/329 (50%), Gaps = 10/329 (3%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I G +  G+  +A+ +  E+    + PD FT   VL    +     +G ++HG  +
Sbjct: 164 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 223

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + G+D DVF+ + LI+ Y +C  + D  RVF  + + + +SW S+I  C +  +  E + 
Sbjct: 224 RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 283

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F +M+   IKPN V+   ++ ACA L  L LG ++  YI       N  + +ALVDMY 
Sbjct: 284 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 343

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG + TA+ +F + +  ++V    ++  Y   G A +A+++   M + G +P+ V  ++
Sbjct: 344 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMA 403

Query: 346 AVSASAQLGDL-----LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            ++A +  G +         M   Y +  GLE + ++     D+  + G+ E A      
Sbjct: 404 VLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA----DLLGRVGRLEEAYEFISD 459

Query: 401 MSNKTVVS-WNSLIAGLIKNGDVESAREV 428
           M  +   S W++L+A    + ++E A +V
Sbjct: 460 MHIEPTGSVWSTLLAACRVHKNIELAEKV 488


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/708 (33%), Positives = 384/708 (54%), Gaps = 33/708 (4%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L+ C +  + G    VHG + K G   D+FV   L+N Y  CG   D RR+FD M ERN
Sbjct: 84  LLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERN 143

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VV+WT+L+        P   + +F EM+E G  P+  T+   ++AC    +++LG +V  
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS------NYVR 317
           Y  + G ++   M N+L  +Y K G++D+A + F    ++N++   T++S        V 
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           LG     L++  +ML+ G  P+  T+ S +S      DL  G+    +  + G E    +
Sbjct: 264 LG-----LSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPV 318

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N+ + +Y++ G+ + A R+F+ M + ++++WN++I+G  +  D  SA++          
Sbjct: 319 KNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMD--SAKD---------- 366

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                    L   +   +A+ +FR +    +K D  T   + S C  + AL+  + I+A 
Sbjct: 367 --------DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQ 418

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             K+G   D+ + +ALV+M+ +CG  Q A + F  M  R    WT+ I   +  G  ++A
Sbjct: 419 TIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEA 478

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           ++LF EM   G++P+ I FV +L+ACS+ GLV +  H F  M   + + P + HYGCM+D
Sbjct: 479 IQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMID 538

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           +  R G + +A   IK    EPN+ IW SL+A C+ H N+++A YAA+++ EL P+    
Sbjct: 539 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIET 598

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           ++LL N+Y S  +W +VARVR  MK++ +  L   S I +  KV+ F + D +HP+   +
Sbjct: 599 YILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATEL 658

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL--LSHHSEKLAMAFGLISTSKTMPI 795
             +L  +  + +  GY P     L D ++ EK     L HHSE+LA+A GL+ T     +
Sbjct: 659 YQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATV 718

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           RV KN+ +C DCHS  KL S + +REIIVRD+ R H F+ G CSC DF
Sbjct: 719 RVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 260/582 (44%), Gaps = 56/582 (9%)

Query: 8   SPL-VLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSY 66
           +PL  L      T+  + KA  +    P +       +L   +  H H+ K G G     
Sbjct: 56  APLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFV 115

Query: 67  ISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLY 126
            + +V    + G       A++ FD   + N     +  + +L+ GY+        + ++
Sbjct: 116 ATSLVNAYMRCGAARD---ARRLFDGMPERN-----VVTWTALVTGYTLNSQPALGLEVF 167

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
           VE+   G  P  +T    LNAC  S     G QVHG  +K G +    + N L + Y + 
Sbjct: 168 VEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL 227

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE-AVYLFFEMVEEGIKPNSVTMVCV 245
           G +    R F  + E+NV++WT++I ACA  +   E  + LF +M+ +G+ PN  T+  V
Sbjct: 228 GSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSV 287

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           +S C    +L LG +V A+  ++G + N  + N+ + +Y++ G  D A +LF + +D ++
Sbjct: 288 MSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASI 347

Query: 306 VLCNTIMSNYVRL-----------GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           +  N ++S Y ++               +AL I  ++     +PD  T  S +S  + + 
Sbjct: 348 ITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMM 407

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            L  G   H   +++G      + + +++MY KCG  + A + F  M  +T V+W S+I+
Sbjct: 408 ALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMIS 467

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
           G  ++G  + A ++F EM           L G                     ++ + +T
Sbjct: 468 GYSQHGQPQEAIQLFEEM----------RLAG---------------------VRPNEIT 496

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
            V + SAC Y G ++ A+  +  ++K   I   +     ++DMF R G  + A    +R 
Sbjct: 497 FVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRT 556

Query: 534 E-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
             + + + W++ +      GN E A    +++L   +KP  I
Sbjct: 557 GFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE--LKPKGI 596



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 189/436 (43%), Gaps = 43/436 (9%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+ EG    S   V ++  C ++ +L     V  ++ + G  A+  +  +LV+ YM+CGA
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
              A++LF    +RN+V    +++ Y         L +  EML  G  P   T+ + ++A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                D+  G+  HGY ++ G E   S+ N++  +Y K G  + A R F  +  K V++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            ++I+   ++                              E   E  + LF  ML + + 
Sbjct: 249 TTMISACAED------------------------------EECVELGLSLFIDMLMDGVM 278

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +  T+  V S CG    L+L K + A+  K G   ++ +  + + ++ R G+   AM++
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRL 338

Query: 530 FRRMEKRDVSAWTAAIGAMAM-----------EGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           F +ME   +  W A I   A               G QA+ +F ++ R  +KPD   F  
Sbjct: 339 FEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSS 398

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L+ CS    + QG  +  + T   G    +V    +V++  + G + +A      MP  
Sbjct: 399 ILSVCSAMMALEQGEQI-HAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTR 457

Query: 639 PNDVIWGSLLAACQKH 654
              V W S+++   +H
Sbjct: 458 -TFVTWTSMISGYSQH 472


>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
 gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
 gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 643

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/585 (40%), Positives = 333/585 (56%), Gaps = 43/585 (7%)

Query: 303 RNLVLC---------NTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQ 352
           R L+LC         NT++  Y        ++A+  EM+  G   PD  +    + A   
Sbjct: 59  RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 118

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
              L  G   H   L++GLE    +  T+I MY  CG  E A ++FD M    +V+WN++
Sbjct: 119 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178

Query: 413 I-------------------------------AGLIKNGDVESAREVFSEMPGRDHISWN 441
           I                               AG IK G++ESA+ +FSEMP RD +SW+
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 238

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           TM+ G+     F E+   FR +    +  + V++ GV SAC   G+ +  K ++ ++EK 
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           G    + +  AL+DM++RCG+   A  VF  M EKR + +WT+ I  +AM G GE+AV L
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           FNEM   G+ PD I F+ +L ACSH GL+ +G   F  M  ++ + P+I HYGCMVDL G
Sbjct: 359 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 418

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           R+G L +A D I  MP+ P  ++W +LL AC  H N+++A    +R+ ELDP  SG  VL
Sbjct: 419 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 478

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSN YA+AGKW +VA +R  M  Q I+K    S +EV   +++FT+G++           
Sbjct: 479 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEK 538

Query: 741 LREMNCRLRD-AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           L+E+  RL+D AGY P++ + L DV+E+EK+  +S HSEKLA+AF L   SK   IR+VK
Sbjct: 539 LKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVK 598

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+  KL SKVY  EI+VRD NRFH F+ GSCSC D+W
Sbjct: 599 NLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 202/460 (43%), Gaps = 80/460 (17%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L +CK L  L Q H   +K G+     +  K++  CA +   ++L YA++    + + + 
Sbjct: 12  LNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCA-ISISDALPYARRLLLCFPEPDA 70

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEG 157
                FM+N+L+RGYS       +++++VE+   G + PD F+F FV+ A     +   G
Sbjct: 71  -----FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125

Query: 158 VQVHGAIVKMG----------------------FDRDVFVE------------------- 176
            Q+H   +K G                      F R VF E                   
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185

Query: 177 ---------------------NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
                                N ++  Y + G++   +R+F EM  R+ VSW+++I   A
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                 E+   F E+   G+ PN V++  V+SAC++  + E G  +  ++++ G      
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305

Query: 276 MVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           + NAL+DMY +CG V  A+ +F G  + R +V   ++++     G   EA+ + +EM  +
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           G  PD ++ +S + A +  G +  G      M   Y +   +E +      M+D+Y + G
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY----GCMVDLYGRSG 421

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREV 428
           K + A      M    T + W +L+     +G++E A +V
Sbjct: 422 KLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQV 461


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/748 (34%), Positives = 407/748 (54%), Gaps = 43/748 (5%)

Query: 107  NSLIRGYSCIGLGVEAISLYVELAGF-GILPDKFTFPFVLNACTKSSAFGEGV----QVH 161
            N L+ G      G  A  ++ E+    GI  D +    +L+A ++ S   EG     +VH
Sbjct: 825  NGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVH 882

Query: 162  GAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
              +++ G  D  V + N L+N Y + G I D   VF+ M E++ VSW SLI    + +  
Sbjct: 883  AHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECS 942

Query: 221  KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
            ++A   F  M   G  P++ T++  +S+CA L  + LG+++     +LG+  +  + NAL
Sbjct: 943  EDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNAL 1002

Query: 281  VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV-RLGLAREALAILDEMLLHGPRPD 339
            + +Y + G      ++F    + + V  N+++           +A+    EM+  G    
Sbjct: 1003 LALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLS 1062

Query: 340  RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            RVT ++ +SA + L         H  VL+  L    +I N ++  Y KCG+     +IF 
Sbjct: 1063 RVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFA 1122

Query: 400  HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
             MS                                RD +SWN+M+ G     +  +AM+L
Sbjct: 1123 RMSET------------------------------RDEVSWNSMISGYIHNELLHKAMDL 1152

Query: 460  FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
               M+ +  ++D  T   V SAC  +  L+    ++A   +  +  D+ + +ALVDM+++
Sbjct: 1153 VWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSK 1212

Query: 520  CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV-FVG 578
            CG    A + F  M  R+V +W + I   A  G+GE+A++LF  M+  G  PD +   +G
Sbjct: 1213 CGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLG 1272

Query: 579  VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
            VL+ACSH G V +G+  F+SM++++ +SP++ H+ CMVDLLGRAG L E  D I SMP++
Sbjct: 1273 VLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMK 1332

Query: 639  PNDVIWGSLLAACQKH--QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
            PN +IW ++L AC +   +N ++   AAE + EL+P+ +  +VLL+N+YAS  KW +VA+
Sbjct: 1333 PNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAK 1392

Query: 697  VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
             R  MKE  ++K  G S + +   VH F +GD+ HPE + I   LRE+N ++RDAGY+P 
Sbjct: 1393 ARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQ 1452

Query: 757  LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
                L D++ + K+ LLS+HSEK+A+AF L   S  +PIR++KNLR+C DCHS    +SK
Sbjct: 1453 TKYALFDLELENKEELLSYHSEKIAVAFVLTRQS-ALPIRIMKNLRVCGDCHSAFGYISK 1511

Query: 817  VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +  R+I++RD+NRFH F  G CSC D+W
Sbjct: 1512 IVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 188/695 (27%), Positives = 313/695 (45%), Gaps = 71/695 (10%)

Query: 5    LNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTL----------NELKQPHCH 54
            LNP+     T ++  L + +K  T+  ++    S +  ++L           E ++ H  
Sbjct: 513  LNPNQ---CTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQ 569

Query: 55   ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
             +K G        + ++    ++G   S   AQK FD     N     L  +  LI GY+
Sbjct: 570  SIKYGFVGNLFLSNTLINIYVRIGDLGS---AQKLFDEMSNRN-----LVTWACLISGYT 621

Query: 115  CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG--EGVQVHGAIVKMGFDRD 172
              G   EA + + ++   G +P+ + F   L AC +S   G   GVQ+HG I K  +  D
Sbjct: 622  QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 681

Query: 173  VFVENCLINFYGECGDIV-DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
            V V N LI+ YG C D   D R VFD +  RN +SW S+I   +RR     A  LF  M 
Sbjct: 682  VVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQ 741

Query: 232  EEGI----KPNSVTMVCVISA-CAKLQ-NLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            +EG+    KPN  T   +I+A C+ +   L + +++ A +++ G   +  + +ALV  + 
Sbjct: 742  KEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFA 801

Query: 286  KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML-LHGPRPDR-VTM 343
            + G  D AK +F +   RN+V  N +M   V+      A  +  EM  L G   D  V +
Sbjct: 802  RFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL 861

Query: 344  LSAVSASAQLGD-LLCGRMCHGYVLRNGL-EGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
            LSA S  + L +    GR  H +V+R GL +   +I N +++MY K G    AC      
Sbjct: 862  LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADAC------ 915

Query: 402  SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                                      VF  M  +D +SWN+++ GL Q    E+A E F 
Sbjct: 916  -------------------------SVFELMVEKDSVSWNSLISGLDQNECSEDAAESFL 950

Query: 462  VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
             M          T++   S+C  LG + L + I+    K G+  D+ ++ AL+ ++A  G
Sbjct: 951  RMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 1010

Query: 522  DPQRAMQVFRRMEKRDVSAWTAAIGAMA-MEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
                 ++VF  M + D  +W + IGA++  E +  QAV+ F EM+R G     + F+ +L
Sbjct: 1011 CFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINIL 1070

Query: 581  TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
            +A S   L ++  H   ++   + +S        ++   G+ G + E   +   M    +
Sbjct: 1071 SAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 1129

Query: 641  DVIWGSLLAACQK----HQNVDIAAYAAERITELD 671
            +V W S+++        H+ +D+  +  ++   LD
Sbjct: 1130 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLD 1164



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 198/403 (49%), Gaps = 24/403 (5%)

Query: 25   KAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFE 81
            +  + P +   I +L +C +L  +   +Q HC  LK GL    S  + ++   A+ G F 
Sbjct: 954  RTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCF- 1012

Query: 82   SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV-EAISLYVELAGFGILPDKFT 140
              T   K F    + ++ S     +NS+I   S     V +A+  ++E+   G    + T
Sbjct: 1013 --TECLKVFSLMPEYDQVS-----WNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVT 1065

Query: 141  FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
            F  +L+A +  S      Q+H  ++K     D  + N L++ YG+CG++ +  ++F  MS
Sbjct: 1066 FINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMS 1125

Query: 201  E-RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
            E R+ VSW S+I      +L  +A+ L + M+++G + +S T   V+SACA +  LE G 
Sbjct: 1126 ETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGM 1185

Query: 260  RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
             V A      M+++ ++ +ALVDMY KCG +D A + F     RN+   N+++S Y R G
Sbjct: 1186 EVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHG 1245

Query: 320  LAREALAILDEMLLHGPRPDRVT-MLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEG 373
               +AL +   M+L G  PD V  +L  +SA + +G +  G      M   Y L   +E 
Sbjct: 1246 HGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEH 1305

Query: 374  WDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAG 415
            +    + M+D+  + GK +      + M  K  V+ W +++  
Sbjct: 1306 F----SCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 1344


>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
 gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
          Length = 635

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/585 (40%), Positives = 333/585 (56%), Gaps = 43/585 (7%)

Query: 303 RNLVLC---------NTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQ 352
           R L+LC         NT++  Y        ++A+  EM+  G   PD  +    + A   
Sbjct: 51  RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 110

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
              L  G   H   L++GLE    +  T+I MY  CG  E A ++FD M    +V+WN++
Sbjct: 111 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 170

Query: 413 I-------------------------------AGLIKNGDVESAREVFSEMPGRDHISWN 441
           I                               AG IK G++ESA+ +FSEMP RD +SW+
Sbjct: 171 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 230

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           TM+ G+     F E+   FR +    +  + V++ GV SAC   G+ +  K ++ ++EK 
Sbjct: 231 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 290

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           G    + +  AL+DM++RCG+   A  VF  M EKR + +WT+ I  +AM G GE+AV L
Sbjct: 291 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 350

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           FNEM   G+ PD I F+ +L ACSH GL+ +G   F  M  ++ + P+I HYGCMVDL G
Sbjct: 351 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 410

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           R+G L +A D I  MP+ P  ++W +LL AC  H N+++A    +R+ ELDP  SG  VL
Sbjct: 411 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 470

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           LSN YA+AGKW +VA +R  M  Q I+K    S +EV   +++FT+G++           
Sbjct: 471 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEK 530

Query: 741 LREMNCRLRD-AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
           L+E+  RL+D AGY P++ + L DV+E+EK+  +S HSEKLA+AF L   SK   IR+VK
Sbjct: 531 LKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVK 590

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           NLR+C DCH+  KL SKVY  EI+VRD NRFH F+ GSCSC D+W
Sbjct: 591 NLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 202/460 (43%), Gaps = 80/460 (17%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L +CK L  L Q H   +K G+     +  K++  CA +   ++L YA++    + + + 
Sbjct: 4   LNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCA-ISISDALPYARRLLLCFPEPDA 62

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEG 157
                FM+N+L+RGYS       +++++VE+   G + PD F+F FV+ A     +   G
Sbjct: 63  -----FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 117

Query: 158 VQVHGAIVKMG----------------------FDRDVFVE------------------- 176
            Q+H   +K G                      F R VF E                   
Sbjct: 118 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 177

Query: 177 ---------------------NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
                                N ++  Y + G++   +R+F EM  R+ VSW+++I   A
Sbjct: 178 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 237

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
                 E+   F E+   G+ PN V++  V+SAC++  + E G  +  ++++ G      
Sbjct: 238 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 297

Query: 276 MVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
           + NAL+DMY +CG V  A+ +F G  + R +V   ++++     G   EA+ + +EM  +
Sbjct: 298 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 357

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           G  PD ++ +S + A +  G +  G      M   Y +   +E +      M+D+Y + G
Sbjct: 358 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY----GCMVDLYGRSG 413

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREV 428
           K + A      M    T + W +L+     +G++E A +V
Sbjct: 414 KLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQV 453


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/772 (32%), Positives = 398/772 (51%), Gaps = 83/772 (10%)

Query: 115 CIGLGVEAISLYVELAGFGIL-----PDKFTFPFVLNACT--KSSAFGEGVQVHGAIVKM 167
           CIGLG    S YV++    I+     P+ F +  +++A    KSS +   V         
Sbjct: 13  CIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV--------- 63

Query: 168 GFDR----DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
            FDR    ++F  N L+  Y + G I +    F+++ +R+ V+W  LI   +   L   A
Sbjct: 64  -FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 122

Query: 224 VYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           V  +  M+ +       VT++ ++   +   ++ LG ++   + +LG ++  L+ + L+ 
Sbjct: 123 VKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV-------------------------- 316
           MY   G +  AK++F    DRN V+ N++M   +                          
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMI 242

Query: 317 ----RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
               + GLA+EA+    EM + G + D+    S + A   LG +  G+  H  ++R   +
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + + +IDMY KC     A  +FD M  K VV                         
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV------------------------- 337

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                 SW  M+ G  Q    EEA+++F  M    I  D  T+    SAC  + +L+   
Sbjct: 338 ------SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
             +     +G+   + ++ +LV ++ +CGD   + ++F  M  RD  +WTA + A A  G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
              + ++LF++M++ G+KPD +   GV++ACS  GLV +G   F+ MT  +G+ P I HY
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CM+DL  R+G L EA+  I  MP  P+ + W +LL+AC+   N++I  +AAE + ELDP
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
                + LLS+IYAS GKW +VA++R  M+E+ ++K PG S I+  GK+H F++ DES P
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
            ++ I + L E+N ++ D GY PD + V  DV+E  K  +L++HSE+LA+AFGLI     
Sbjct: 632 YLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSG 691

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PIRV KNLR+C DCH+  K +S V  REI+VRD  RFH F+ G+CSC DFW
Sbjct: 692 QPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 189/373 (50%), Gaps = 13/373 (3%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + ++I+G +  GL  EAI  + E+   G+  D++ F  VL AC    A  EG Q+H  I+
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +  F   ++V + LI+ Y +C  +   + VFD M ++NVVSWT+++    +    +EAV 
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F +M   GI P+  T+   ISACA + +LE G +        G+     + N+LV +Y 
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +D + +LF E   R+ V    ++S Y + G A E + + D+M+ HG +PD VT+  
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477

Query: 346 AVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            +SA ++ G +  G+     M   Y +   +  +    + MID++ + G+ E A R  + 
Sbjct: 478 VISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY----SCMIDLFSRSGRLEEAMRFING 533

Query: 401 MS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD--HISWNTMLGGL-TQENMFEEA 456
           M      + W +L++     G++E  +     +   D  H +  T+L  +   +  ++  
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSV 593

Query: 457 MELFRVMLSERIK 469
            +L R M  + +K
Sbjct: 594 AQLRRGMREKNVK 606



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 164/325 (50%), Gaps = 24/325 (7%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           P+ G L     +NE KQ H  I++       +  S +  + C C      + L YA+  F
Sbjct: 278 PACGGLG---AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC------KCLHYAKTVF 328

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           D   + N  S T     +++ GY   G   EA+ +++++   GI PD +T    ++AC  
Sbjct: 329 DRMKQKNVVSWT-----AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
            S+  EG Q HG  +  G    V V N L+  YG+CGDI D  R+F+EM+ R+ VSWT++
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELG 269
           + A A+     E + LF +MV+ G+KP+ VT+  VISAC++   +E G R    +  E G
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMS---NYVRLGLAREAL 325
           +  +    + ++D++ + G ++ A +   G     + +   T++S   N   L + + A 
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563

Query: 326 AILDEMLLHGPRPDRVTMLSAVSAS 350
             L E+  H   P   T+LS++ AS
Sbjct: 564 ESLIELDPH--HPAGYTLLSSIYAS 586


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/763 (31%), Positives = 418/763 (54%), Gaps = 33/763 (4%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQV 160
           L + NSL+  Y+  G    A +L      F  +P+K   ++  ++     + A  E + +
Sbjct: 206 LPLVNSLLNLYAKTGCEKIAANL------FSKMPEKDVISWSTMIACYANNEAANEALNL 259

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
              +++  F+ +       +       ++ +G+++      ++VVSW +L+   A+  + 
Sbjct: 260 FHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMA 319

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
            +++ +F  M+ +GI+P++V +V +++A ++L   +    +  Y+   G  +N  +  +L
Sbjct: 320 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASL 379

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML--LHGPRP 338
           +++Y KCG++  A +LF     R++V+ +++++ Y   G   EAL I D+M+  + G   
Sbjct: 380 IELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQG--- 436

Query: 339 DRVTMLSAVSASAQLGDLLCGRMC----------HGYVLRNGLEGWDSICNTMIDMYMKC 388
             +T    +S   Q+   L    C            + +R     W      +   Y   
Sbjct: 437 --ITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFR-WLGHFWEIFPTYPFQ 493

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
                   IF +                +    +++A  VF ++P      WN M+ G  
Sbjct: 494 AADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFA 553

Query: 449 QENMFEEAMELFRVMLSERIKVD-------RVTMVGVASACGYLGALDLAKWIYAYIEKN 501
            +  F  ++EL+  M+ + +K D       RV+++ V  ACG LGAL   +W ++Y+ + 
Sbjct: 554 TDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQT 613

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G   D+ +ATA++DM+++CG    A  +F     +D+  W+A I +  + G+G +A++LF
Sbjct: 614 GFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLF 673

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           ++M++ G++P  + F  VL+ACSH GL+ +G   F+ MT+   ++ ++ +Y CMVDLLGR
Sbjct: 674 DQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGR 733

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG L EA+DLI++MPVEP+  IWGSLL AC+ H N+D+A   A+ +  LDP  +G HVLL
Sbjct: 734 AGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLL 793

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIYA+  +W  V +VR  M  +G  K+ G S +E + +VH+F  GD SHP+   + + L
Sbjct: 794 SNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKL 853

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
            E+   ++  GYVP    VL D++E+ K+  LS+HSE+LA+AFGLI+TS    +R+ KNL
Sbjct: 854 EELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNL 913

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCH+  KL+SK+ +R I+VRD +RFH F  G CSC D+W
Sbjct: 914 RICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 216/452 (47%), Gaps = 77/452 (17%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+H  + K G   D F    L + Y +C  +   R+VFDE    NV  W S + +  R  
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 219 LPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI---DELGMKANA 274
             +E + LF  M+   G  P++ T+   + ACA L+ LELG  +  +    DE+G  ++ 
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIG--SDM 139

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + +ALV++Y KCG +  A ++F E +  + VL  ++++ Y +     EALA+  +M   
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM--- 196

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
                                          V+ +  +G   + N+++++Y K G +++A
Sbjct: 197 -------------------------------VMMDCFDGDLPLVNSLLNLYAKTGCEKIA 225

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM------PG-------------- 434
             +F  M  K V+SW+++IA    N     A  +F EM      P               
Sbjct: 226 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 285

Query: 435 ---------------RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
                          +D +SW  +L G  Q  M  ++M +FR MLS+ I+ D V +V + 
Sbjct: 286 RNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKIL 345

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
           +A   LG    A  ++ Y+ ++G + ++ +  +L++++++CG    A+++F+ M  RDV 
Sbjct: 346 AASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV 405

Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLR--QGI 569
            W++ I A  + G G +A+E+F++M++  QGI
Sbjct: 406 IWSSMIAAYGIHGRGGEALEIFDQMIQVMQGI 437



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 158/672 (23%), Positives = 282/672 (41%), Gaps = 75/672 (11%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
            + C     + Q H  + K G+ H   + +K+    A+     SL  A+K FD     N 
Sbjct: 11  FQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCA---SLQAARKVFDETPHPN- 66

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
               + ++NS +R Y       E + L+ + +   G  PD FT P  L AC        G
Sbjct: 67  ----VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122

Query: 158 VQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
             +HG   K      D+FV + L+  Y +CG + +  +VF+E    + V WTS++    +
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182

Query: 217 RDLPKEAVYLFFEMVE----EGIKP--NSVTMVCVISACAKLQN-----------LELGD 259
            + P+EA+ LF +MV     +G  P  NS+  +   + C K+             +    
Sbjct: 183 NNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWST 242

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL-------------- 305
            +  Y +         + + +++   +  +V     L      RNL              
Sbjct: 243 MIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKD 302

Query: 306 -VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
            V    ++S Y + G+A +++ +   ML  G +PD V ++  ++AS++LG        HG
Sbjct: 303 VVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHG 362

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           YV+R+G      +  ++I++Y KCG    A ++F  M  + VV W+S+IA    +G    
Sbjct: 363 YVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGE 422

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI--KVDRVTMVGVASAC 482
           A E+F +M     +   T    ++ +   +  + +    L+  I  KV    M       
Sbjct: 423 ALEIFDQMI--QVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWL 480

Query: 483 GY---------LGALDLAKW-IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           G+           A D++K  I+AY    G+  D ++ T    M+        A  VF  
Sbjct: 481 GHFWEIFPTYPFQAADMSKSNIFAY----GLQYDSRILTKFAIMYVSFNRIDAASIVFED 536

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS-------IVFVGVLTACSH 585
           +       W   I   A +G    ++EL+++M+ +G+KPD+       +  + VL AC +
Sbjct: 537 IPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGN 596

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PNDV 642
            G + +G   F S     G    I+    ++D+  + G    +LDL + +  E    + V
Sbjct: 597 LGALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCG----SLDLARCLFDETAGKDLV 651

Query: 643 IWGSLLAACQKH 654
            W +++A+   H
Sbjct: 652 CWSAMIASYGIH 663


>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1221

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/630 (36%), Positives = 355/630 (56%), Gaps = 42/630 (6%)

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG-----AVDTAKQLFGECKDRNLVL 307
           +NL    ++  +  + G+  ++  +  L+   + C      A+  A++L     + +  +
Sbjct: 183 KNLRALTQIHGFFIKSGVDTDSYFIGKLI---LHCAISISDALPYARRLLLCFPEPDAFM 239

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
            NT++  Y        ++A+  EM+  G   PD  +    V A+A    L  G   H   
Sbjct: 240 FNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQA 299

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI------------- 413
           L++GL+    +  T+I MY +CG    A ++FD M    +V+WN+++             
Sbjct: 300 LKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAR 359

Query: 414 ------------------AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                             AG IK G++E A+ +FSEMP RD +SW+TM+ G +    F E
Sbjct: 360 EIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNE 419

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           +   FR +L   ++ + V++ GV SAC   GA +  K ++ ++EK+G    + +  AL+D
Sbjct: 420 SFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALID 479

Query: 516 MFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           M++RCG+   A  VF  M EKR + +WT+ I  +AM G+GE+A+ +FNEM   G+ PD I
Sbjct: 480 MYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEI 539

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ +L ACSH GL+ +G   F  M  ++ + P + HYGCMVDL GR+G L +A   I  
Sbjct: 540 SFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQ 599

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+ P  ++W +LL AC  H N+++A    +R+ ELDP  SG  VLLSN+YA+AGKW +V
Sbjct: 600 MPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDV 659

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD-AGY 753
           A +R  M  Q I+K+   S +EV   +++FT+ ++           L+E+  RLRD AGY
Sbjct: 660 ASIRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGY 719

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
            P++ + L DV+E+EK+  +S HSEKLA+AF L    K   IR+VKNLR+C DCH+  KL
Sbjct: 720 APEVASALYDVEEEEKEDQVSKHSEKLALAFALARLPKGANIRIVKNLRICRDCHAVMKL 779

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
            S+VY  EI++RD NRFH F+ GSCSC D+
Sbjct: 780 TSRVYGVEIVIRDRNRFHSFKDGSCSCGDY 809



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 253/565 (44%), Gaps = 98/565 (17%)

Query: 15  PTVTTLTNQHKA--------KTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSY 66
           PTV T TNQ +         K T KD       + CK L  L Q H   +K G+     +
Sbjct: 154 PTVITQTNQRRRRMNALFAWKITRKD-------QYCKNLRALTQIHGFFIKSGVDTDSYF 206

Query: 67  ISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLY 126
           I K++  CA +   ++L YA++    + + +      FM+N+L+RGYS       +++++
Sbjct: 207 IGKLILHCA-ISISDALPYARRLLLCFPEPDA-----FMFNTLVRGYSESDEPHNSVAVF 260

Query: 127 VELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           VE+   G I PD F+F FV+ A     +   G Q+H   +K G D  +FV   LI  YGE
Sbjct: 261 VEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGE 320

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
           CG +   R+VFDEM + N+V+W +++ AC R +    A  +F +M               
Sbjct: 321 CGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDKM--------------- 365

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
                                   +  N    N ++  Y+K G ++ AK++F E   R+ 
Sbjct: 366 ------------------------LVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDD 401

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           V  +T++  +   G   E+ +   E+L    RP+ V++   +SA +Q G    G+  HG+
Sbjct: 402 VSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGF 461

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNGDVES 424
           V ++G     S+ N +IDMY +CG   MA  +F+ M  K ++VSW S+IAGL  +G  E 
Sbjct: 462 VEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGE- 520

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                                         EA+ +F  M    +  D ++ + +  AC +
Sbjct: 521 ------------------------------EAIRIFNEMTESGVMPDEISFISLLYACSH 550

Query: 485 LGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-AWT 542
            G +   +  ++ +++   I   ++    +VD++ R G  Q+A     +M     +  W 
Sbjct: 551 AGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWR 610

Query: 543 AAIGAMAMEGN---GEQAVELFNEM 564
             +GA +  GN    EQ  +  NE+
Sbjct: 611 TLLGACSSHGNIELAEQVKQRLNEL 635


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 257/798 (32%), Positives = 404/798 (50%), Gaps = 43/798 (5%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q   H++  GL    +++S         G    +  A++ FD   + +  S     +N++
Sbjct: 166 QVTAHVVVSGL---LTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRIS-----WNAM 217

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           I  YS   +  +   +  ++    + PD  T   +++ C  S     G  +H   V  G 
Sbjct: 218 ISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGL 277

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
              V + N L+N Y   G + +   +F  MS R+V+SW ++I +  + +   EA+    +
Sbjct: 278 HCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQ 337

Query: 230 MVE--EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
           +++  EG  PNS+T    + AC+  + L  G  + A I +  ++   L+ N+L+ MY KC
Sbjct: 338 LLQTDEG-PPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKC 396

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
            +++  +++F      ++V CN +   Y  L     A+ +   M   G +P+ +TM++  
Sbjct: 397 NSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQ 456

Query: 348 SASAQLGDLLC-GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
                LGDL   G   H YV + GL   + I N++I MY  CG                 
Sbjct: 457 GTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCG----------------- 499

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                         D+ES+  +FS +  +  ISWN ++    +    EEA++LF      
Sbjct: 500 --------------DLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHA 545

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
             K+DR  +    S+   L +L+    ++    KNG+ CD  +  A +DM+ +CG     
Sbjct: 546 GNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCM 605

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
           ++       R    W   I   A  G  ++A + F  M+  G KPD + FV +L+ACSH 
Sbjct: 606 LKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHA 665

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GL+++G   + SM    GVSP I H  C+VDLLGR G   EA   I  MPV PND+IW S
Sbjct: 666 GLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRS 725

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL++ + H+N+DI   AA+ + ELDP     +VLLSN+YA+  +W +V ++R  MK   +
Sbjct: 726 LLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKL 785

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            K P  S +++  +V  F  GD SH     I   L E+  +LR+ GYV D ++ L D DE
Sbjct: 786 NKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDE 845

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           ++K++ L +HSEKLA+A+GL+   +   IR+ KNLR+C DCH   KLVS V+ REI++RD
Sbjct: 846 EQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRD 905

Query: 827 NNRFHFFRQGSCSCSDFW 844
             RFH F+ GSCSCSDFW
Sbjct: 906 PYRFHQFKHGSCSCSDFW 923



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 177/685 (25%), Positives = 290/685 (42%), Gaps = 81/685 (11%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           T  TL    + +  P    ++ SL   C+     +   C      L H+   +  V    
Sbjct: 24  TAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGT 83

Query: 75  AQMGTFES---LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
           A +  + S   +  AQ+ F    + N  S T  M        S  G   EA+  Y  +  
Sbjct: 84  ALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMV-----ALSSNGCMEEALVAYRRMRK 138

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            G++ +      V++ C        G+QV   +V  G    V V N LI  +G    + D
Sbjct: 139 EGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQD 198

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
             R+FD M ER+ +SW ++I   +  ++  +   +  +M    +KP+  T+  ++S CA 
Sbjct: 199 AERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCAS 258

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
              + LG  + +     G+  +  ++NALV+MY   G +D A+ LF     R+++  NT+
Sbjct: 259 SDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTM 318

Query: 312 MSNYVRLGLAREALAILDEMLL--HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           +S+YV+     EAL  L ++L    GP P+ +T  SA+ A +    L+ GR  H  +L+ 
Sbjct: 319 ISSYVQSNSCVEALETLGQLLQTDEGP-PNSMTFSSALGACSSPEALMNGRTIHAMILQR 377

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            L+    I N+++ MY KC   E   R+F+ M    VVS N L  G     DV +A  VF
Sbjct: 378 SLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVF 437

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
           S M G                                 IK + +TM+ +   C  LG  D
Sbjct: 438 SWMRGTG-------------------------------IKPNYITMINLQGTCKSLG--D 464

Query: 490 LAKW---IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
           L  +   ++AY+ + G+  D  +  +L+ M+A CGD + +  +F R+  + V +W A I 
Sbjct: 465 LHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIA 524

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGW-- 593
           A    G GE+A++LF +    G K D       L++ +           HG  V  G   
Sbjct: 525 ANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDC 584

Query: 594 --HLFRSMTDIHG----------VSPQIVH-----YGCMVDLLGRAGLLGEALDLIKSMP 636
             H+  +  D++G            P   H     +  ++    R G   EA D  K M 
Sbjct: 585 DSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMV 644

Query: 637 V---EPNDVIWGSLLAACQKHQNVD 658
               +P+ V + +LL+AC     +D
Sbjct: 645 SVGQKPDYVTFVALLSACSHAGLID 669



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 163/391 (41%), Gaps = 37/391 (9%)

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK---LQNL 255
           M  R   SW + +  CAR  L   A  L   M E  +  +   +  +++AC      +  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
             G  + A     G+  N  +  AL+ +Y   G V  A++LF E   RN+V    IM   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
              G   EAL     M   G   +   + + VS    L D + G     +V+ +GL    
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           S+ N++I M+    + + A R+FD M  +  +SWN++I+                     
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMIS--------------------- 219

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                       + E ++ +   +   M    +K D  T+  + S C     + L   I+
Sbjct: 220 ----------MYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIH 269

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           +    +G+HC + L  ALV+M++  G    A  +FR M +RDV +W   I +     +  
Sbjct: 270 SLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCV 329

Query: 556 QAVELFNEMLR--QGIKPDSIVFVGVLTACS 584
           +A+E   ++L+  +G  P+S+ F   L ACS
Sbjct: 330 EALETLGQLLQTDEG-PPNSMTFSSALGACS 359


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/742 (32%), Positives = 387/742 (52%), Gaps = 68/742 (9%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P  +    +L A  K+       +V  A+       ++F  N L++       + D   +
Sbjct: 39  PPTYLLNHLLTAYGKAGRHARARRVFDAMPH----PNLFTYNALLSTLAHARLLSDMEAL 94

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAV--YLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           F  M++R++VS+ ++I   +      +AV  YL     +  ++P+ +TM  ++ A + L 
Sbjct: 95  FASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALG 154

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +  LG +    I  LG  ANA + + LVDMY K   V  AK+ F E   +N+V+ NT+++
Sbjct: 155 DRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMIT 214

Query: 314 NYVRL-------------------------------GLAREALAILDEMLLHGPRPDRVT 342
             +R                                GL  EAL I   M   G   D+ T
Sbjct: 215 GLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYT 274

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
             S ++A   L  L  G+  H Y++R   +    + + ++DMY KC   ++A  +F  M+
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMT 334

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K +                               ISW  ++ G  Q    EEA+ +F  
Sbjct: 335 CKNI-------------------------------ISWTALIVGYGQNGCSEEAVRVFSE 363

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           M  + I  D  T+  V S+C  L +L+     +     +G+   + ++ ALV ++ +CG 
Sbjct: 364 MQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGS 423

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            + A ++F  M   D  +WTA +   A  G  ++ ++LF +ML +G+KPD + F+GVL+A
Sbjct: 424 IEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSA 483

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS  G V +G   F SM   HG+ P   HY CM+DL  R+G L EA + IK MP+ P+ +
Sbjct: 484 CSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAI 543

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
            WG+LL+AC+   +++I  +AAE + E+DP+    +VLL +++A+ G+W  VA++R  M+
Sbjct: 544 GWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMR 603

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
           ++ ++K PG S I+   KVH F++ D+SHP    I   L  +N ++ + GY PD+++VL 
Sbjct: 604 DRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLH 663

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           DV + +K +++SHHSEKLA+AFGLI   + MPIR+VKNLR+C DCH+  K +SK+  R+I
Sbjct: 664 DVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDI 723

Query: 823 IVRDNNRFHFFRQGSCSCSDFW 844
           +VRD  RFH F  G CSC DFW
Sbjct: 724 LVRDAVRFHKFSDGVCSCGDFW 745



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 244/541 (45%), Gaps = 73/541 (13%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGE 156
           T   +  YN++I G+S  G   +A+ +Y+ L  A   + P + T   ++ A +       
Sbjct: 99  TQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRAL 158

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV----------- 205
           G Q H  I+++GF  + FV + L++ Y +   + D +R FDE+  +NVV           
Sbjct: 159 GKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLR 218

Query: 206 --------------------SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
                               +WT+++    +  L  EA+ +F  M  +GI  +  T   +
Sbjct: 219 CKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSI 278

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           ++AC  L  LE G ++ AYI       N  + +ALVDMY KC ++  A+ +F     +N+
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNI 338

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           +    ++  Y + G + EA+ +  EM   G  PD  T+ S +S+ A L  L  G   H  
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCL 398

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
            L +GL  + ++ N ++ +Y KCG  E A R+FD MS    VSW +L++G  + G     
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRA--- 455

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                       +E ++LF  ML++ +K D VT +GV SAC   
Sbjct: 456 ----------------------------KETIDLFEKMLAKGVKPDGVTFIGVLSACSRA 487

Query: 486 GALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTA 543
           G ++  +  +  ++K+ GI       T ++D+++R G  + A +  ++M    D   W  
Sbjct: 488 GFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGT 547

Query: 544 AIGAMAMEGN---GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
            + A  + G+   G+ A E   E+  Q   P S V +  + A    G  N+   L R M 
Sbjct: 548 LLSACRLRGDMEIGKWAAENLLEIDPQ--NPASYVLLCSMHAAK--GQWNEVAQLRRGMR 603

Query: 601 D 601
           D
Sbjct: 604 D 604



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 217/452 (48%), Gaps = 34/452 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN----------- 97
           KQ HC IL+ G G      S +V   A+M        A++AFD     N           
Sbjct: 160 KQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGD---AKRAFDEVDSKNVVMYNTMITGL 216

Query: 98  ------ETSATLF---------MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
                 E +  LF          + +++ G++  GL  EA+ ++  +   GI  D++TF 
Sbjct: 217 LRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFG 276

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +L AC   SA  +G Q+H  I++  +D +VFV + L++ Y +C  I     VF  M+ +
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK 336

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N++SWT+LI    +    +EAV +F EM  +GI P+  T+  VIS+CA L +LE G +  
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFH 396

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                 G+     + NALV +Y KCG+++ A +LF E    + V    ++S Y + G A+
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAK 456

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-MCHGYVLRNGLEGWDSICNTM 381
           E + + ++ML  G +PD VT +  +SA ++ G +  GR   H     +G+   D     M
Sbjct: 457 ETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCM 516

Query: 382 IDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVES---AREVFSEMPGRDH 437
           ID+Y + GK + A      M  +   + W +L++     GD+E    A E   E+  ++ 
Sbjct: 517 IDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNP 576

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            S+  +      +  + E  +L R M   ++K
Sbjct: 577 ASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVK 608


>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
 gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
          Length = 653

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/481 (44%), Positives = 313/481 (65%), Gaps = 2/481 (0%)

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           +L  G +    + N++I  Y+ CG    A ++ D M  K V+SW S++A   ++ D+ SA
Sbjct: 173 LLLGGFDKHRFVENSLIGAYVACGDVGAARKVLDEMVVKDVISWTSIVAAYSRSRDMGSA 232

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
            EVF+  P +D ++W  M+ G  Q  M  +A+E F  M    + +D V++ G  SAC  L
Sbjct: 233 EEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAGAGMPIDEVSLTGAISACAQL 292

Query: 486 GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
           GA+  A WI    +++G+  ++ + + LVDM+A+CG    A +VF  M++++V  +++ I
Sbjct: 293 GAVRRAVWIQEIADRSGLGRNVVVGSGLVDMYAKCGLIDEACRVFEGMQEKNVYTYSSMI 352

Query: 546 GAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
             +A  G    A+ LFN+M+R+  ++P+ + F+GVLTACSH G+V +G + F  M D +G
Sbjct: 353 VGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYG 412

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + P   HY CMVDLLGRAGL+ EALDL+KSM VEP+  +WG+LL AC+ H N  +A  AA
Sbjct: 413 ILPSADHYTCMVDLLGRAGLVIEALDLVKSMTVEPHGGVWGALLGACRIHGNTKVAKVAA 472

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE-VNGKVHE 723
           + + +L+PE  G +VLLSN  ASAG+W  V++VR  M+ +G++K P  SS E  +G VH+
Sbjct: 473 QHLFKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKLMRIRGLKKDPAVSSFEGRDGLVHQ 532

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F +GD +HP M+ I   L E+  RL+ AGYVP L++V+ +V ++EK+ LL  HSEKLA++
Sbjct: 533 FFAGDNTHPWMHEIKKTLLELRARLKLAGYVPVLSSVVYNVSDEEKERLLMGHSEKLALS 592

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           FGL++      IR+VKNLR+C DCH F +LVSKV   EIIVRDN RFH FR G CSC  F
Sbjct: 593 FGLLTLESRSSIRIVKNLRICEDCHLFIRLVSKVEPIEIIVRDNMRFHHFRDGECSCGGF 652

Query: 844 W 844
           W
Sbjct: 653 W 653



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 40/296 (13%)

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-RDL------- 219
           GFD+  FVEN LI  Y  CGD+   R+V DEM  ++V+SWTS++ A +R RD+       
Sbjct: 177 GFDKHRFVENSLIGAYVACGDVGAARKVLDEMVVKDVISWTSIVAAYSRSRDMGSAEEVF 236

Query: 220 -----------------------PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
                                  P +A+  F +M   G+  + V++   ISACA+L  + 
Sbjct: 237 ALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAGAGMPIDEVSLTGAISACAQLGAVR 296

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
               +    D  G+  N ++ + LVDMY KCG +D A ++F   +++N+   ++++    
Sbjct: 297 RAVWIQEIADRSGLGRNVVVGSGLVDMYAKCGLIDEACRVFEGMQEKNVYTYSSMIVGLA 356

Query: 317 RLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVL-RNGLEGW 374
             G A +A+A+ ++M+      P+ VT +  ++A +  G +  GR     +  R G+   
Sbjct: 357 SHGRANDAIALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPS 416

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS----WNSLIAGLIKNGDVESAR 426
                 M+D+    G+  +     D + + TV      W +L+     +G+ + A+
Sbjct: 417 ADHYTCMVDL---LGRAGLVIEALDLVKSMTVEPHGGVWGALLGACRIHGNTKVAK 469



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 102/193 (52%), Gaps = 2/193 (1%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +++ GY+   + V+A+  + ++AG G+  D+ +    ++AC +  A    V +     
Sbjct: 247 WTAMVTGYAQNAMPVKALEAFEQMAGAGMPIDEVSLTGAISACAQLGAVRRAVWIQEIAD 306

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + G  R+V V + L++ Y +CG I +  RVF+ M E+NV +++S+I   A      +A+ 
Sbjct: 307 RSGLGRNVVVGSGLVDMYAKCGLIDEACRVFEGMQEKNVYTYSSMIVGLASHGRANDAIA 366

Query: 226 LFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDM 283
           LF +MV    ++PN VT + V++AC+    ++ G    A + D  G+  +A     +VD+
Sbjct: 367 LFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYTCMVDL 426

Query: 284 YMKCGAVDTAKQL 296
             + G V  A  L
Sbjct: 427 LGRAGLVIEALDL 439


>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
 gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
          Length = 452

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/452 (45%), Positives = 303/452 (67%)

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           MA ++F  +S++ +V   ++I+G  + G VE AR +F +M  +D + W+ M+ G  + + 
Sbjct: 1   MAQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDK 60

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            +EA+ LF  M    IK D+VT++ V SAC  LG LD AKWI+ Y++KNG+   + +  A
Sbjct: 61  PQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNA 120

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+DM+A+CG+   A  VF +M+ R+V +WT+ I A A+ G+   A++ F +M  + IKP+
Sbjct: 121 LIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPN 180

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + FVGVL ACSH GLV +G   F SMT+ H ++P+  HYGCMVDL GRA LL +AL+L+
Sbjct: 181 GVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELV 240

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           ++MP+ PN VIWGSL+AACQ H   ++  +AA+++ EL+P+  G  V LSNIYA   +W 
Sbjct: 241 ETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQ 300

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
           +V  +R  MK++GI K  G S IE+N +V+EF   D+ H + + I   L E+   L+  G
Sbjct: 301 DVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVG 360

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y P+  +VL+DV+E+ KK ++  HSEKLA+ +GL+   K   IR+VKNLR+C DCH+F K
Sbjct: 361 YTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIK 420

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LVSKVY  EIIVRD  RFH ++ G CSC+D+W
Sbjct: 421 LVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 141/272 (51%), Gaps = 6/272 (2%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R++ V   +I+ Y   G + D R +FD+M E+++V W+++I   A  D P+EA+ LF EM
Sbjct: 12  RNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEM 71

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
              GIKP+ VT++ VISACA+L  L+    +  Y+D+ G+     + NAL+DMY KCG +
Sbjct: 72  QVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNL 131

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
             A+ +F + + RN++   ++++ +   G A  AL    +M     +P+ VT +  + A 
Sbjct: 132 GAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYAC 191

Query: 351 AQLGDLLCGRMCHGYVL-RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVS 408
           +  G +  GR     +   + +         M+D++ +      A  + + M     VV 
Sbjct: 192 SHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVI 251

Query: 409 WNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
           W SL+A    +G+ E    +A++V    P  D
Sbjct: 252 WGSLMAACQIHGENELGEFAAKQVLELEPDHD 283



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 1/204 (0%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I D      L  ++++I GY+      EA++L+ E+  FGI PD+ T   V++AC +   
Sbjct: 36  IFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGV 95

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
                 +H  + K G    + V N LI+ Y +CG++   R VF++M  RNV+SWTS+I A
Sbjct: 96  LDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINA 155

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKA 272
            A       A+  F++M +E IKPN VT V V+ AC+    +E G R  A + +E  +  
Sbjct: 156 FAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITP 215

Query: 273 NALMVNALVDMYMKCGAVDTAKQL 296
                  +VD++ +   +  A +L
Sbjct: 216 KHEHYGCMVDLFGRANLLRDALEL 239


>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
          Length = 558

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/516 (42%), Positives = 301/516 (58%), Gaps = 35/516 (6%)

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
           +M + G  PD  T    + A A+L     G   H  + + G +    + N +I  Y  CG
Sbjct: 77  KMTMAGVSPDHFTFPFVLKACARLQ---TGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCG 133

Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
             + A + F+                               EMP RD +SW++M+    +
Sbjct: 134 FLDFALKAFE-------------------------------EMPERDLVSWSSMIACFAK 162

Query: 450 ENMFEEAMELF-RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
                EA+ LF R+ L   +K D V ++ V SA   LG L+L KWI  +I +NG+   + 
Sbjct: 163 NGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVS 222

Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
           L TALVDMF+RCG  + +M+VF  M +R+V  WTA I  +A+ G   +A+ +F EM   G
Sbjct: 223 LGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHG 282

Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
            +PD + F GVL ACSHGGLV++GWH+F S+ + +G+ P   HYGCMVDLLGRAGLL EA
Sbjct: 283 FQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEA 342

Query: 629 LDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
              +  MP+ PN +IW +LL AC  H  +++A    E+I ELD    G +VLLSN+Y   
Sbjct: 343 CKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGV 402

Query: 689 GKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL 748
           G+W   A VR  M+E+ I K PG S I VN  +HEF +GD +HP+  +I   L  M   L
Sbjct: 403 GRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSL 462

Query: 749 RDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCH 808
           +  GY PD++NVL D++E+EK+  L +HSEKLA+AF L+    +  IRV+KNLR+C DCH
Sbjct: 463 KVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCH 522

Query: 809 SFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            F K  S V++REII+RD NRFH F +GSCSC D+W
Sbjct: 523 CFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 210/389 (53%), Gaps = 17/389 (4%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           +N + + H  +LK G  + P  + +++ +CA      SL+YA+  FD  I   +T    F
Sbjct: 1   MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAP-ASLSYARSIFDL-IAFPDT----F 54

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            +N++IR ++       ++SL+ ++   G+ PD FTFPFVL AC +      G+ +H  +
Sbjct: 55  AFNTIIRAHADSSP-SFSLSLFSKMTMAGVSPDHFTFPFVLKACARLQT---GLDLHSLL 110

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            K+GFD DV+V+N LI+FYG CG +    + F+EM ER++VSW+S+I   A+     EA+
Sbjct: 111 FKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEAL 170

Query: 225 YLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            LF  M   G +KP+ V ++ V+SA + L +LELG  +  +I   G++    +  ALVDM
Sbjct: 171 ALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDM 230

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           + +CG ++ + ++F E  +RN++    +++     G + EAL +  EM  HG +PD VT 
Sbjct: 231 FSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTF 290

Query: 344 LSAVSASAQLGDLLCGRMCHGY-VLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
              + A +  G  L     H +  +RN  G+E        M+D+  + G    AC+  D 
Sbjct: 291 TGVLVACSHGG--LVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDG 348

Query: 401 MSNK-TVVSWNSLIAGLIKNGDVESAREV 428
           M  +   + W +L+   + +  +E A +V
Sbjct: 349 MPIRPNSIIWRTLLGACVNHNYIELAEKV 377



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 146/280 (52%), Gaps = 9/280 (3%)

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R +FD ++  +  ++ ++I A A             +M   G+ P+  T   V+ ACA+
Sbjct: 41  ARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFS-KMTMAGVSPDHFTFPFVLKACAR 99

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           LQ    G  + + + +LG  ++  + N L+  Y  CG +D A + F E  +R+LV  +++
Sbjct: 100 LQT---GLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSM 156

Query: 312 MSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           ++ + + G   EALA+   M L G  +PD V +LS VSA + LGDL  G+   G++ RNG
Sbjct: 157 IACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNG 216

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           LE   S+   ++DM+ +CG  E + R+FD M  + V++W +LI GL  +G    A  +F 
Sbjct: 217 LEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFY 276

Query: 431 EMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           EM       DH+++  +L   +   +  E   +F  + +E
Sbjct: 277 EMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNE 316



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 11/233 (4%)

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           AR +F  +   D  ++NT++      +         ++ ++  +  D  T   V  AC  
Sbjct: 41  ARSIFDLIAFPDTFAFNTIIRAHADSSPSFSLSLFSKMTMAG-VSPDHFTFPFVLKACAR 99

Query: 485 L-GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
           L   LDL   ++    K G   D+ +   L+  +  CG    A++ F  M +RD+ +W++
Sbjct: 100 LQTGLDLHSLLF----KLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSS 155

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQG-WHLFRSMTD 601
            I   A  G G +A+ LF  M   G +KPD ++ + V++A S  G +  G W   R    
Sbjct: 156 MIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKW--IRGFIS 213

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            +G+   +     +VD+  R G + E++ +   M  E N + W +L+     H
Sbjct: 214 RNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMG-ERNVLTWTALINGLAVH 265


>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 637

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/615 (38%), Positives = 364/615 (59%), Gaps = 18/615 (2%)

Query: 245 VISACAKLQNLELGDRV--CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           ++  C++   L  G ++   A +  L    N  + NAL+ +Y  C     A++LF E   
Sbjct: 26  LLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIPQ 85

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG--DLLCGR 360
            +    +   +  +R     E+L +  +M       D V M+ A++A A+LG  D   G 
Sbjct: 86  SHKD--SVDYTALIRHCPPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVGS 143

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H  V++ G   +D +CN ++++Y+K G    A ++F+ +  ++VVSW+  + GL+K  
Sbjct: 144 QMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWE 203

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVA 479
            VES R +F EMP R+ ++W  M+ G       +EA  L + M+     ++  VT+  V 
Sbjct: 204 SVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVL 263

Query: 480 SACGYLGALDLAKWIYAY-IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
           SAC   G + + +W++ Y +++ G+   + + T+LVDM+A+CG    A+ VFR M KR+V
Sbjct: 264 SACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNV 323

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            AW A +G +AM G G+ AV++F  M+ + +KPD + F+ +L+ACSH GLV +GW  F  
Sbjct: 324 VAWNAMLGGLAMHGMGKIAVDMFPSMVEE-VKPDGVTFMALLSACSHSGLVEKGWDYFHD 382

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           +  ++ + P+I HY CMV LLGRAG L EA  ++K+M + PN+V+ GSL+ +C  H  + 
Sbjct: 383 LEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQ 442

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +       + E+DP  +  H++LSN+YA +GK      +R  +K++GI+K+PG SSI V+
Sbjct: 443 LGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVD 502

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL-------DVDE--QEK 769
           GK+H+F +GD+SH   + I   L EM CRLR AGYVP+ +  +L       D  E  +E 
Sbjct: 503 GKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPNTSCQVLFGCSNRDDCSESLEEV 562

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + +L  HSEKLA+ FGL+ST    P+ + KNLR+C DCHS  K+ SKVY REI+VRD  R
Sbjct: 563 EQVLFTHSEKLALCFGLMSTPSGSPLHIFKNLRICQDCHSAIKIASKVYKREIVVRDRYR 622

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+ GSCSCSD+W
Sbjct: 623 FHSFKHGSCSCSDYW 637



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 225/501 (44%), Gaps = 108/501 (21%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGF--DRDVFVENCLINFYGECGDIVDGRRVFDE 198
           F  +L  C++++A   G Q+H   +  G     + F+ N L++ YG C      R++FDE
Sbjct: 23  FRSLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDE 82

Query: 199 M--SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL--QN 254
           +  S ++ V +T+LI  C     P E++ LF +M +  +  + V MVC ++ACA+L   +
Sbjct: 83  IPQSHKDSVDYTALIRHCP----PFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGD 138

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCG-------------------------- 288
            ++G ++   + + G      + NAL+++Y+K G                          
Sbjct: 139 TKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEG 198

Query: 289 -----AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVT 342
                +V++ + LF E  +RN V    ++  YV  G  +EA  +L EM+   G R   VT
Sbjct: 199 LVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVT 258

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           + S +SA +Q GD+  GR  H Y ++  GL+    +  +++DMY KCG+   A  +F  M
Sbjct: 259 LCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM 318

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             + VV+WN++                               LGGL    M + A+++F 
Sbjct: 319 LKRNVVAWNAM-------------------------------LGGLAMHGMGKIAVDMFP 347

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M+ E +K D VT + + SAC + G ++   W Y +        D++             
Sbjct: 348 SMV-EEVKPDGVTFMALLSACSHSGLVE-KGWDYFH--------DLE------------- 384

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
                  V+R   K ++  +   +G +   G  E+A E+  + +R  I P+ +V   ++ 
Sbjct: 385 ------PVYRI--KPEIEHYACMVGLLGRAGRLEEA-EIMVKNMR--IPPNEVVLGSLIG 433

Query: 582 ACSHGGLVNQGWHLFRSMTDI 602
           +C   G +  G  + R + ++
Sbjct: 434 SCYAHGRLQLGEKIMRDLLEM 454



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 49/355 (13%)

Query: 39  LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L+ C     L+   Q H   +  GL   P++  +        G+    ++A+K FD   +
Sbjct: 27  LRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALL-HLYGSCSLPSHARKLFDEIPQ 85

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            ++ S     Y +LIR   C     E++ L++++  F +  D       LNAC +    G
Sbjct: 86  SHKDSVD---YTALIR--HCPPF--ESLKLFIQMRQFDLPLDGVVMVCALNACARLGG-G 137

Query: 156 E---GVQVHGAIVKMGFDRDVFVENCLINFYGECG------------------------- 187
           +   G Q+H  +VK GF +   V N L+N Y + G                         
Sbjct: 138 DTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLE 197

Query: 188 ------DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSV 240
                  +  GR +FDEM ERN V+WT +I         KEA  L  EMV   G + + V
Sbjct: 198 GLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFV 257

Query: 241 TMVCVISACAKLQNLELGDRV-CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           T+  V+SAC++  ++ +G  V C  + E+G+    ++  +LVDMY KCG ++ A  +F  
Sbjct: 258 TLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRS 317

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
              RN+V  N ++      G+ + A+ +   M +   +PD VT ++ +SA +  G
Sbjct: 318 MLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSM-VEEVKPDGVTFMALLSACSHSG 371



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 8/189 (4%)

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA- 130
           C    +  +ES+   +  FD   + NE + T+     +I GY   G   EA  L  E+  
Sbjct: 194 CFLEGLVKWESVESGRVLFDEMPERNEVAWTV-----MIVGYVGNGFTKEAFLLLKEMVF 248

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDI 189
           G G      T   VL+AC++S     G  VH   VK MG D  V V   L++ Y +CG I
Sbjct: 249 GCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRI 308

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
                VF  M +RNVV+W +++   A   + K AV +F  MVEE +KP+ VT + ++SAC
Sbjct: 309 NAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVEE-VKPDGVTFMALLSAC 367

Query: 250 AKLQNLELG 258
           +    +E G
Sbjct: 368 SHSGLVEKG 376


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 251/797 (31%), Positives = 414/797 (51%), Gaps = 40/797 (5%)

Query: 49   KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
            +Q    ++K GL  K +  + ++     MG  +   YA   F+  I + +T +    +NS
Sbjct: 281  RQIIGQVIKSGLESKLAVENSLISMFGNMGNVD---YANYIFNQ-ISERDTIS----WNS 332

Query: 109  LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
            ++  Y+  G   E+  ++  +  F    +  T   +L+          G  +HG +VKMG
Sbjct: 333  IVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMG 392

Query: 169  FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            FD  V V N L+  Y   G   +   VF +M  ++++SW SL+ +        +A+ +  
Sbjct: 393  FDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILC 452

Query: 229  EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
             M+  G   N VT    ++AC   +  + G  +   +   G+  N ++ NALV MY K G
Sbjct: 453  SMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIG 512

Query: 289  AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
             + T++++  +   R++V  N ++  Y       +ALA    + + G   + +T++S +S
Sbjct: 513  GMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLS 572

Query: 349  ASAQLGDLL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A    GDLL  G+  H Y++  G E  + + N++I MY KCG                  
Sbjct: 573  ACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG------------------ 614

Query: 408  SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                         D+ S++++F+ +  R  I+WN +L         EE ++L   M S  
Sbjct: 615  -------------DLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFG 661

Query: 468  IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
            + +D+ +     SA   L  L+  + ++    K G   D  +  A  DM+++CG+    +
Sbjct: 662  LSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVV 721

Query: 528  QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            ++      R + +W   I A+   G  E+  E F+EML  GIKP  + FV +LTACSHGG
Sbjct: 722  KMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGG 781

Query: 588  LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
            LV+QG   +  +    G+ P I H  C++DLLGR+G L EA   I  MP++PND++W SL
Sbjct: 782  LVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 841

Query: 648  LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
            LA+C+ H+++D    AAE +++L+PE   V VL SN++A+ G+W +V  VR QM  + I+
Sbjct: 842  LASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIK 901

Query: 708  KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
            K    S +++  KV  F  GD +HP+   I + L ++   ++++GYV D +  L D DE+
Sbjct: 902  KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEE 961

Query: 768  EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
            +K++ L +HSE+LA+A+ L+ST +   +R+ KNLR+C DCHS  K VS+V  R I++RD 
Sbjct: 962  QKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQ 1021

Query: 828  NRFHFFRQGSCSCSDFW 844
             RFH F  G CSC D+W
Sbjct: 1022 YRFHHFESGLCSCKDYW 1038



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 157/577 (27%), Positives = 278/577 (48%), Gaps = 40/577 (6%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  +  A+  FD     NE S     +N+++ G   +GL +E +  + ++   GI P  F
Sbjct: 106 FGRVKPARYLFDKMPVRNEVS-----WNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSF 160

Query: 140 TFPFVLNACTKS-SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
               ++ AC +S S F EGVQVHG + K G   DV+V   +++ YG  G +   R+VF+E
Sbjct: 161 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 220

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M +RNVVSWTSL+   + +  P+E + ++  M  EG++ N  +M  VIS+C  L++  LG
Sbjct: 221 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLG 280

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            ++   + + G+++   + N+L+ M+   G VD A  +F +  +R+ +  N+I++ Y + 
Sbjct: 281 RQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQN 340

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G   E+  I + M       +  T+ + +S    +     GR  HG V++ G +    +C
Sbjct: 341 GHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVC 400

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           NT++ MY   G+ E A  +F  M  K ++SWNSL+A  + +G     R +          
Sbjct: 401 NTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDG-----RSL---------- 445

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                           +A+ +   M+     V+ VT     +AC      D  + ++  +
Sbjct: 446 ----------------DALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLV 489

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
             +G+  +  +  ALV M+ + G    + +V  +M +RDV AW A IG  A   + ++A+
Sbjct: 490 VVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKAL 549

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTAC-SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
             F  +  +G+  + I  V VL+AC   G L+ +G  L   +      S + V    ++ 
Sbjct: 550 AAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVK-NSLIT 608

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
           +  + G L  + DL   +    + + W ++LAA   H
Sbjct: 609 MYAKCGDLSSSQDLFNGLD-NRSIITWNAILAANAHH 644



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 296/646 (45%), Gaps = 79/646 (12%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQM---GTFESLTYAQKAFDYYIKDNETSATLFMY 106
           Q H  + K GL      +S V  + A +   G +  ++ ++K F+     N  S T    
Sbjct: 181 QVHGFVAKSGL------LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT---- 230

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
            SL+ GYS  G   E I +Y  + G G+  ++ +   V+++C        G Q+ G ++K
Sbjct: 231 -SLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIK 289

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G +  + VEN LI+ +G  G++     +F+++SER+ +SW S++ A A+    +E+  +
Sbjct: 290 SGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRI 349

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F  M     + NS T+  ++S    + + + G  +   + ++G  +   + N L+ MY  
Sbjct: 350 FNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 409

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
            G  + A  +F +   ++L+  N++M+++V  G + +AL IL  M+  G   + VT  SA
Sbjct: 410 AGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSA 469

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           ++A         GR+ HG V+ +GL     I N ++ MY K G                 
Sbjct: 470 LAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIG----------------- 512

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                          + ++R V  +MP RD ++WN ++GG  +    ++A+  F+ +  E
Sbjct: 513 --------------GMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVE 558

Query: 467 RIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
            +  + +T+V V SAC   G  L+  K ++AYI   G   D  +  +L+ M+A+CGD   
Sbjct: 559 GVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 618

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS- 584
           +  +F  ++ R +  W A + A A  G+GE+ ++L ++M   G+  D   F   L+A + 
Sbjct: 619 SQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAK 678

Query: 585 ----------HGGLVNQGWHL----FRSMTDIH---------------GVSPQIVHYGCM 615
                     HG  V  G+ L    F +  D++                V+  +  +  +
Sbjct: 679 LAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 738

Query: 616 VDLLGRAGLLGEALDLIK---SMPVEPNDVIWGSLLAACQKHQNVD 658
           +  LGR G   E  +       M ++P  V + SLL AC     VD
Sbjct: 739 ISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 784



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 237/517 (45%), Gaps = 42/517 (8%)

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G  +H   VK      V   N LIN Y + G +   R +FD+M  RN VSW +++    R
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL-ELGDRVCAYIDELGMKANAL 275
             L  E +  F +M + GIKP+S  +  +++AC +  ++   G +V  ++ + G+ ++  
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  A++ +Y   G V  ++++F E  DRN+V   ++M  Y   G   E + I   M   G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
              +  +M   +S+   L D   GR   G V+++GLE   ++ N++I M+   G  + A 
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            IF+ +S +  +SWNS++A   +NG +E +  +F+ M  R H                  
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMR-RFH------------------ 357

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW---IYAYIEKNGIHCDMQLATA 512
                          D V    V++    LG +D  KW   I+  + K G    + +   
Sbjct: 358 ---------------DEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNT 402

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+ M+A  G  + A  VF++M  +D+ +W + + +   +G    A+ +   M+R G   +
Sbjct: 403 LLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVN 462

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + F   L AC      ++G  +   +  + G+    +    +V + G+ G +  +  ++
Sbjct: 463 YVTFTSALAACFSPEFFDKG-RILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVL 521

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVD--IAAYAAERI 667
             MP   + V W +L+    ++++ D  +AA+   R+
Sbjct: 522 LQMP-RRDVVAWNALIGGYAENEDPDKALAAFQTLRV 557


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/797 (31%), Positives = 415/797 (52%), Gaps = 41/797 (5%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q   H++  GL  + S  + ++     +G       A+K F Y +++ +T +    +N+L
Sbjct: 166 QVFSHVIVSGLQRQVSVANSLISMLGNLGRVHD---AEKLF-YRMEERDTVS----WNAL 217

Query: 110 IRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +  YS  GL  ++  ++ ++   G+L  D  T   +++ C  S     G  VH   ++ G
Sbjct: 218 VSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTG 277

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
               + V N L+N Y   G + D   +F  MS R+++SW ++I +  +     +A+    
Sbjct: 278 LHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLG 337

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +++     P+ +T    + AC+    L  G  V A   +L +  N L+ N+L+ MY KC 
Sbjct: 338 QLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCN 397

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +++ A+++F    + ++V CN ++ +Y  L    +A+ +   M     + + +T+++ + 
Sbjct: 398 SIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILG 457

Query: 349 ASAQLGDLL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           +     DL   G   H Y +  G    D + N++I MY KCG                  
Sbjct: 458 SFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCG------------------ 499

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                        D+ES+  VF  +  R  +SWN M+    Q    EE+++LF  M  + 
Sbjct: 500 -------------DLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDG 546

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
             +D + +    S+   L +L+    ++    K G+  D  +  A +DM+ +CG     +
Sbjct: 547 NGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEML 606

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           ++      R    W   I   A  G  ++A E F  M+  G  PD + FV +L+ACSH G
Sbjct: 607 KMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAG 666

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV++G   + SM+ + GVSP I H  C+VD+LGR G   EA   I+ MPV PND+IW SL
Sbjct: 667 LVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSL 726

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L++ + H+N+DI   AA+R+ ELDP     +VLLSN+YA++ +W++V RVR  MK   + 
Sbjct: 727 LSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLN 786

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K+P  S ++   +V  F  GD SH   + I   L E+  +LR+ GYV D ++ L D DE+
Sbjct: 787 KIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVADTSSALHDTDEE 846

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           +K+  L +HSEKLA+A+GLI+  +   +R+ KNLR+C DCH   KLVS V+DREI++RD 
Sbjct: 847 QKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDP 906

Query: 828 NRFHFFRQGSCSCSDFW 844
            RFH F+ GSCSCSDFW
Sbjct: 907 YRFHHFKGGSCSCSDFW 923



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 260/561 (46%), Gaps = 55/561 (9%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +L+   S  G   EA+  Y  +    I  +   F  V++ C        G+QV   ++
Sbjct: 113 WTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVI 172

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             G  R V V N LI+  G  G + D  ++F  M ER+ VSW +L+   +   L  ++  
Sbjct: 173 VSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFR 232

Query: 226 LFFEMVEEGIKPNSVTMVC-VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
           +F +M   G+  +  T +C +IS CA    +  G  V +     G+ +   +VNALV+MY
Sbjct: 233 VFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMY 292

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
              G +  A+ LF     R+L+  NT++S+YV+ G   +AL  L ++L     PDR+T  
Sbjct: 293 SSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFS 352

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           SA+ A +  G L+ GRM H   L+  L     + N++I MY KC   E A RIF  M N 
Sbjct: 353 SALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNH 412

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VVS N LI                         S+  +  G        +AM++F  M 
Sbjct: 413 DVVSCNILIG------------------------SYAVLEDG-------TKAMQVFFWMR 441

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKW---IYAYIEKNGIHCDMQLATALVDMFARCG 521
              +K++ +T+V +  +  +  + DL  +   ++AY    G   D  ++ +L+ M+A+CG
Sbjct: 442 RGEVKLNYITIVNILGS--FTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCG 499

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           D + +  VF+R+  R V +W A I A    G+GE++++LF +M   G   D I     ++
Sbjct: 500 DLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMS 559

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGV--------SPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           + +    + +G  L       HG+           +V+    +D+ G+ G + E L ++ 
Sbjct: 560 SSASLASLEEGMQL-------HGLGLKCGLGNDSHVVN--AAMDMYGKCGKMDEMLKMLP 610

Query: 634 SMPVEPNDVIWGSLLAACQKH 654
              + P    W +L++   ++
Sbjct: 611 DPAIRPQQC-WNTLISGYARY 630



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/437 (22%), Positives = 178/437 (40%), Gaps = 32/437 (7%)

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN-LELGD 259
            R   SW + I  C R      A  +   M E G+  +   +  +++AC + +     G 
Sbjct: 5   HRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGA 64

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            + A   + G+  N  +  AL+ +Y     V  A++LF E  +RN+V    +M      G
Sbjct: 65  AIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNG 124

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              EAL     M       +     + VS    L D + G     +V+ +GL+   S+ N
Sbjct: 125 HLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVAN 184

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           ++I M    G+   A ++F  M  +  VSWN+L++     G    +  VFS+M       
Sbjct: 185 SLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMR------ 238

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                GGL                    ++ D  T+  + S C     +     +++   
Sbjct: 239 ----RGGL--------------------LRHDATTLCSLISVCASSDYVSYGSGVHSLCL 274

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           + G+H  + +  ALV+M++  G    A  +F  M +RD+ +W   I +    GN   A++
Sbjct: 275 RTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALK 334

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
              ++L     PD + F   L ACS  G +  G  +  +MT    +   ++    ++ + 
Sbjct: 335 TLGQLLHTNEGPDRMTFSSALGACSSPGALMDG-RMVHAMTLQLSLHHNLLVGNSLITMY 393

Query: 620 GRAGLLGEALDLIKSMP 636
           G+   + +A  + + MP
Sbjct: 394 GKCNSIEDAERIFQLMP 410



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 17/347 (4%)

Query: 13  ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVC 72
           A  T+  L + ++       S ++G+  +   L + +  H   L+  L H     + ++ 
Sbjct: 332 ALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLI- 390

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
                G   S+  A++ F      +  S      N LI  Y+ +  G +A+ ++  +   
Sbjct: 391 --TMYGKCNSIEDAERIFQLMPNHDVVSC-----NILIGSYAVLEDGTKAMQVFFWMRRG 443

Query: 133 GILPDKFTFPFVLNACTKSSAF-GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            +  +  T   +L + T S+     G+ +H   +  GF  D +V N LI  Y +CGD+  
Sbjct: 444 EVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLES 503

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
              VF  +  R+VVSW ++I A  +    +E++ LF +M  +G   N +  +C ++ C  
Sbjct: 504 SNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDG---NGLDHIC-LAECMS 559

Query: 252 LQNLELGDRVCAYIDELGMKA----NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
                        +  LG+K     ++ +VNA +DMY KCG +D   ++  +   R    
Sbjct: 560 SSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQC 619

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            NT++S Y R G  +EA      M+  G  PD VT ++ +SA +  G
Sbjct: 620 WNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAG 666



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 10/242 (4%)

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           V  A+ +F EMP R+ +SW  ++  L+     EEA+  +R M  ERI  +      V S 
Sbjct: 95  VLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSL 154

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           CG L        +++++  +G+   + +A +L+ M    G    A ++F RME+RD  +W
Sbjct: 155 CGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSW 214

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVN--QGWHLFRS 598
            A +   + EG   ++  +F++M R G ++ D+     +++ C+    V+   G H    
Sbjct: 215 NALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCL 274

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAA-CQKHQN 656
            T +H   P +     +V++   AG L +A  L  +M     D+I W +++++  Q   N
Sbjct: 275 RTGLHSYIPVV---NALVNMYSSAGKLADAEFLFWNM--SRRDLISWNTMISSYVQNGNN 329

Query: 657 VD 658
           +D
Sbjct: 330 MD 331



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 23/222 (10%)

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW----- 493
           SW T + G  +      A  + R M    + +    +  + +AC         +W     
Sbjct: 10  SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTAC--------ERWEEGRA 61

Query: 494 ----IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
               I+A  +K G+  ++ + TAL+ ++        A ++F  M +R+V +WTA + A++
Sbjct: 62  CGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALS 121

Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ--GWHLFRSMTDIHGVSP 607
             G+ E+A+  +  M R+ I  ++  F  V++ C  G L ++  G  +F S   + G+  
Sbjct: 122 SNGHLEEALGYYRRMRRERIACNANAFATVVSLC--GSLEDEVAGLQVF-SHVIVSGLQR 178

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
           Q+     ++ +LG  G + +A  L   M  E + V W +L++
Sbjct: 179 QVSVANSLISMLGNLGRVHDAEKLFYRME-ERDTVSWNALVS 219


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 257/766 (33%), Positives = 411/766 (53%), Gaps = 43/766 (5%)

Query: 78   GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA---GFG- 133
            GT   +T A + FD   + N     L  +NS+IR +S  G   E+  L  E+    G G 
Sbjct: 588  GTHGFVTDALQLFDIMPERN-----LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 642

Query: 134  ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
             +PD  T   VL  C +    G G  VHG  VK+  D+++ + N L++ Y +CG I + +
Sbjct: 643  FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 702

Query: 194  RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE--EGIKPNSVTMVCVISACAK 251
             +F   + +NVVSW +++   +          +  +M+   E +K + VT++  +  C  
Sbjct: 703  MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 762

Query: 252  LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
               L     +  Y  +     N L+ NA V  Y KCG++  A+++F   + + +   N +
Sbjct: 763  ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 822

Query: 312  MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
            +  + +    R +L    +M + G  PD  T+ S +SA ++L  L  G+  HG+++RN L
Sbjct: 823  IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 882

Query: 372  EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
            E    +  +++ +Y+ CG+      +FD M +K++VS                       
Sbjct: 883  ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS----------------------- 919

Query: 432  MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
                    WNT++ G  Q    + A+ +FR M+   I++  ++M+ V  AC  L +L L 
Sbjct: 920  --------WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 971

Query: 492  KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
            +  +AY  K+ +  D  +A +L+DM+A+ G   ++ +VF  ++++  ++W A I    + 
Sbjct: 972  REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 1031

Query: 552  GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
            G  ++A++LF EM R G  PD + F+GVLTAC+H GL+++G      M    G+ P + H
Sbjct: 1032 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 1091

Query: 612  YGCMVDLLGRAGLLGEALDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITEL 670
            Y C++D+LGRAG L +AL ++     E  DV IW SLL++C+ HQN+++    A ++ EL
Sbjct: 1092 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 1151

Query: 671  DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
            +PEK   +VLLSN+YA  GKW +V +VR +M E  +RK  G S IE+N KV  F  G+  
Sbjct: 1152 EPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERF 1211

Query: 731  HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
                  I S+   +  ++   GY PD  +V  D+ E+EK   L  HSEKLA+ +GLI TS
Sbjct: 1212 LDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTS 1271

Query: 791  KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
            +   IRV KNLR+C DCH+ AKL+SKV +REI+VRDN RFH F+ G
Sbjct: 1272 EGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 243/499 (48%), Gaps = 38/499 (7%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKS 151
           ++ D   S  LF +N++I  YS   L  E +  ++E+ +   +LPD FT+P V+ AC   
Sbjct: 496 FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 555

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
           S  G G+ VHG +VK G   DVFV N L++FYG  G + D  ++FD M ERN+VSW S+I
Sbjct: 556 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 615

Query: 212 CACARRDLPKEAVYLFFEMVEE----GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
              +     +E+  L  EM+EE       P+  T+V V+  CA+ + + LG  V  +  +
Sbjct: 616 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 675

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
           L +    ++ NAL+DMY KCG +  A+ +F    ++N+V  NT++  +   G       +
Sbjct: 676 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 735

Query: 328 LDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
           L +ML  G   + D VT+L+AV        L   +  H Y L+      + + N  +  Y
Sbjct: 736 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 795

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            KCG    A R+F  + +KTV SWN+LI G  ++ D   + +   +M           + 
Sbjct: 796 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK----------IS 845

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
           GL                       D  T+  + SAC  L +L L K ++ +I +N +  
Sbjct: 846 GLLP---------------------DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 884

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D+ +  +++ ++  CG+      +F  ME + + +W   I      G  ++A+ +F +M+
Sbjct: 885 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 944

Query: 566 RQGIKPDSIVFVGVLTACS 584
             GI+   I  + V  ACS
Sbjct: 945 LYGIQLCGISMMPVFGACS 963



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 192/411 (46%), Gaps = 34/411 (8%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKP 237
           +I  Y  CG   D R VFD +  +N+  W ++I + +R +L  E +  F EM+    + P
Sbjct: 481 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 540

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           +  T  CVI ACA + ++ +G  V   + + G+  +  + NALV  Y   G V  A QLF
Sbjct: 541 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 600

Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR----PDRVTMLSAVSASAQL 353
               +RNLV  N+++  +   G + E+  +L EM+         PD  T+++ +   A+ 
Sbjct: 601 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 660

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
            ++  G+  HG+ ++  L+    + N ++DMY KCG    A  IF   +NK VVSWN+++
Sbjct: 661 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 720

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            G    GD     +V  +M          + GG                   E +K D V
Sbjct: 721 GGFSAEGDTHGTFDVLRQM----------LAGG-------------------EDVKADEV 751

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T++     C +   L   K ++ Y  K     +  +A A V  +A+CG    A +VF  +
Sbjct: 752 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 811

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
             + V++W A IG  A   +   +++   +M   G+ PDS     +L+ACS
Sbjct: 812 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 213/395 (53%), Gaps = 19/395 (4%)

Query: 45   LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
            L  LK+ HC+ LKQ   +     +  V + A+ G   SL+YAQ+ F + I+    S T+ 
Sbjct: 766  LPSLKELHCYSLKQEFVYNELVANAFVASYAKCG---SLSYAQRVF-HGIR----SKTVN 817

Query: 105  MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
             +N+LI G++       ++  ++++   G+LPD FT   +L+AC+K  +   G +VHG I
Sbjct: 818  SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 877

Query: 165  VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            ++   +RD+FV   +++ Y  CG++   + +FD M ++++VSW ++I    +   P  A+
Sbjct: 878  IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 937

Query: 225  YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             +F +MV  GI+   ++M+ V  AC+ L +L LG    AY  +  ++ +A +  +L+DMY
Sbjct: 938  GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 997

Query: 285  MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
             K G++  + ++F   K+++    N ++  Y   GLA+EA+ + +EM   G  PD +T L
Sbjct: 998  AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 1057

Query: 345  SAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF- 398
              ++A    G +  G     +M   + L+  L+ +  +    IDM  + G+ + A R+  
Sbjct: 1058 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDKALRVVA 1113

Query: 399  DHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
            + MS +  V  W SL++    + ++E   +V +++
Sbjct: 1114 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL 1148



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 31/345 (8%)

Query: 245 VISACAKLQNLELGDRVCAYID-ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
           ++ A  K +++E+G ++   +     ++ + ++   ++ MY  CG+ D ++ +F   + +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           NL   N ++S+Y R  L  E L    EM+      PD  T    + A A + D+  G   
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           HG V++ GL     + N ++  Y   G    A ++FD M  + +VSWNS+I     NG  
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           E   E F             +LG + +EN     M             D  T+V V   C
Sbjct: 625 E---ESF------------LLLGEMMEENGDGAFMP------------DVATLVTVLPVC 657

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
                + L K ++ +  K  +  ++ L  AL+DM+++CG    A  +F+    ++V +W 
Sbjct: 658 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 717

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQG--IKPDSIVFVGVLTACSH 585
             +G  + EG+     ++  +ML  G  +K D +  +  +  C H
Sbjct: 718 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 762



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           D  L T ++ M+A CG P  +  VF  +  +++  W A I + +     ++ +E F EM+
Sbjct: 474 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 533

Query: 566 R-QGIKPDSIVFVGVLTACSHGGLVNQGWHL-FRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
               + PD   +  V+ AC+  G+ + G  L    +    G+   +     +V   G  G
Sbjct: 534 STTDLLPDHFTYPCVIKACA--GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 591

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLL 648
            + +AL L   MP E N V W S++
Sbjct: 592 FVTDALQLFDIMP-ERNLVSWNSMI 615


>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
 gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
          Length = 621

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/556 (40%), Positives = 325/556 (58%), Gaps = 13/556 (2%)

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           ++  A ++F   ++ N+ L   ++   V      + + +  +M+     PD   + S + 
Sbjct: 79  SIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLK 138

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A      L  GR  H  VL+ GL    SI   +I++Y KCG  E A R+FD M  + VV+
Sbjct: 139 ACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVA 198

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
              +I     +G              +D + W  M+ GL +      A+E+FR M  E +
Sbjct: 199 STVMINYYFDHGI-------------KDTVCWTAMIDGLVRNGESNRALEVFRNMQREDV 245

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             + VT+V V SAC  LGAL L +W+ +Y++K+ I  +  +  AL++M++RCGD   A +
Sbjct: 246 MPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQR 305

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           VF +M++++V  + + I   A+ G   +AVELF  +++QG  P S+ FVGVL ACSHGGL
Sbjct: 306 VFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGL 365

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
              G+ +F SM   +G+ PQI HYGCMVDLLGR G L EA   I+ M V P+ V+ G+LL
Sbjct: 366 AELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALL 425

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           +AC+ H N+++A   A+ +       SG ++LLSN Y+S+GKW   A VR  M+E+GI K
Sbjct: 426 SACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEK 485

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG SSIEVN ++HEF  GD  HP+   I   L E+N  LR  GY P    VL D+++ E
Sbjct: 486 EPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSE 545

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K++ L+ HSE+LA+ +GLIST     +RVVKNLR+C DCH   KL+S +  R+I+VRD N
Sbjct: 546 KEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRN 605

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F  G CSC D+W
Sbjct: 606 RFHHFENGVCSCGDYW 621



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 228/474 (48%), Gaps = 44/474 (9%)

Query: 28  TTPKDSPS-----IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFES 82
           T PK++P+     I  L+NCK  N++   +  I++      P  + +++  C+ +    S
Sbjct: 23  TKPKNTPNRRRHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSNLN---S 79

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           + YA K F +    N     +++Y +LI G        + I LY ++    ++PD +   
Sbjct: 80  IGYASKIFSHTQNPN-----VYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVT 134

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            VL AC    A  EG +VH  ++K+G   +  +   LI  YG+CG   D RRVFDEM ER
Sbjct: 135 SVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPER 194

Query: 203 NVVS------------------WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +VV+                  WT++I    R      A+ +F  M  E + PN VT+VC
Sbjct: 195 DVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVC 254

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V+SAC++L  L+LG  V +Y+D+  ++ N  +  AL++MY +CG +D A+++F + K++N
Sbjct: 255 VLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKN 314

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS-----AQLGDLLCG 359
           ++  N+++  +   G + EA+ +   ++  G  P  VT +  ++A      A+LG  +  
Sbjct: 315 VITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFH 374

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIK 418
            M   Y +   +E +      M+D+  + G+ E A      M      V   +L++    
Sbjct: 375 SMAKDYGIEPQIEHY----GCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKI 430

Query: 419 NGDVESAREVFSEM---PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           +G++E A  V   +      D  ++  +    +    ++EA E+   M  E I+
Sbjct: 431 HGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIE 484



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 101/269 (37%), Gaps = 60/269 (22%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           IYA I +N  H D  +   L+ + +       A ++F   +  +V  +TA I  + +   
Sbjct: 51  IYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCY 110

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGWHLFRSM--- 599
               + L+ +M+   + PDS     VL AC            H  ++  G    RS+   
Sbjct: 111 YTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIK 170

Query: 600 -----------------------TDI------------HGVSPQIVHYGCMVDLLGRAGL 624
                                   D+            HG+   +  +  M+D L R G 
Sbjct: 171 LIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVC-WTAMIDGLVRNGE 229

Query: 625 LGEALDLIKSMPVE---PNDVIWGSLLAACQKHQNVDIA----AYAAERITELDPEKSGV 677
              AL++ ++M  E   PN+V    +L+AC +   + +     +Y  +   EL+    G 
Sbjct: 230 SNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGA 289

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGI 706
              L N+Y+  G      RV  QMKE+ +
Sbjct: 290 ---LINMYSRCGDIDEAQRVFEQMKEKNV 315


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/741 (34%), Positives = 384/741 (51%), Gaps = 69/741 (9%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  +L  C        G  +H   +K       +  N  I  Y +CG +   R+ F ++S
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 201 ERNVVSWTSLICACARRDLP-------------------------------KEAVYLFFE 229
           + NV S+ ++I A A+   P                                 A+ LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M E G+  +  T+  VI+AC    ++ L  ++ +     G  +   + NAL+  Y K G 
Sbjct: 131 MREMGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 290 VDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +D AK++F G    R+ V  N+++  Y +     +AL +  EM+  G   D  T+ S ++
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A   L DL  G   HG +++ G      + + +ID+Y KCG                   
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG------------------- 289

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ-ENMFEEAMELFRVMLSER 467
                      G +   R+VF E+   D + WNTM+ G +Q E   E+A+E FR M    
Sbjct: 290 -----------GGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD-MQLATALVDMFARCGDPQRA 526
            + +  + V V SAC  L +    K I++   K+ I  + + +  AL+ M+++CG+ Q A
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDA 398

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            ++F RM + +  +  + I   A  G   +++ LF  ML + I P SI F+ VL+AC+H 
Sbjct: 399 RRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHT 458

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           G V +GW+ F  M +   + P+  HY CM+DLLGRAG L EA +LI  MP  P  + W S
Sbjct: 459 GRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWAS 518

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+ H N+++A  AA ++ +L+P  +  +V+LSN+YASAG+W  VA VR  M+++G+
Sbjct: 519 LLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGV 578

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
           +K PG S IEV  ++H F + D SHP +  I   L EM+ +++ AGYVPD+   L+  D 
Sbjct: 579 KKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDG 638

Query: 767 Q---EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
               EK+  L HHSEKLA+AFGLIST    P+ VVKNLR+C DCH+  K +S +  REI 
Sbjct: 639 TRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREIT 698

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD +RFH F++G CSC D+W
Sbjct: 699 VRDAHRFHCFKEGQCSCGDYW 719



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 227/478 (47%), Gaps = 41/478 (8%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D      L  YN+LI  Y+  G    A+ L+  +   G+  D FT   V+ AC      G
Sbjct: 98  DQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDD--VG 155

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNVVSWTSLICAC 214
              Q+H   V  GFD  V V N L+ +YG+ GD+ D +RVF  M   R+ VSW S+I A 
Sbjct: 156 LIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAY 215

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +     +A+ LF EMV  G+  +  T+  V++A   L++L  G +    + + G   N+
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 275 LMVNALVDMYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNYVR-LGLAREALAILDEML 332
            + + L+D+Y KC G +   +++F E  + +LVL NT++S Y +      +AL    +M 
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQ 391
             G RP+  + +  +SA + L     G+  H   L++ +     S+ N +I MY KCG  
Sbjct: 336 GIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNL 395

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           + A R+FD M+    VS NS+IAG  ++G          EM                   
Sbjct: 396 QDARRLFDRMAEHNTVSLNSMIAGYAQHG---------IEM------------------- 427

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI--EKNGIHCDMQL 509
              E++ LF+ ML  +I    +T + V SAC + G ++   W Y  +  EK  I  + + 
Sbjct: 428 ---ESLHLFQWMLERQIAPTSITFISVLSACAHTGRVE-EGWNYFNMMKEKFNIEPEAEH 483

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMAMEGNGEQAVELFNEMLR 566
            + ++D+  R G    A  +  RM     S  W + +GA    GN E AV+  N++L+
Sbjct: 484 YSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/655 (36%), Positives = 351/655 (53%), Gaps = 33/655 (5%)

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R V      RNVVSWTSLI   A+      A+  FFEM  EG+ PN  T  C   A A 
Sbjct: 11  ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 70

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L+    G ++ A   + G   +  +  +  DMY K    D A++LF E  +RNL   N  
Sbjct: 71  LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 130

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
           +SN V  G  REA+    E       P+ +T  + ++A +    L  G   HG VLR+G 
Sbjct: 131 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 190

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
           +   S+CN +ID Y KC +                               + S+  +F+E
Sbjct: 191 DTDVSVCNGLIDFYGKCKQ-------------------------------IRSSEIIFTE 219

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           M  ++ +SW +++    Q +  E+A  L+     + ++     +  V SAC  +  L+L 
Sbjct: 220 MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 279

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           + I+A+  K  +   + + +ALVDM+ +CG  + + Q F  M ++++    + IG  A +
Sbjct: 280 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 339

Query: 552 GNGEQAVELFNEMLRQGI--KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
           G  + A+ LF EM  +G    P+ + FV +L+ACS  G V  G  +F SM   +G+ P  
Sbjct: 340 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 399

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
            HY C+VD+LGRAG++  A + IK MP++P   +WG+L  AC+ H    +   AAE + +
Sbjct: 400 EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 459

Query: 670 LDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           LDP+ SG HVLLSN +A+AG+W     VR ++K  GI+K  G S I V  +VH F + D 
Sbjct: 460 LDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDR 519

Query: 730 SHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST 789
           SH     I + L ++   +  AGY PDL   L D++E+EK   +SHHSEKLA+AFGL+S 
Sbjct: 520 SHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSL 579

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             ++PIR+ KNLR+C DCHSF K VS    REIIVRDNNRFH F+ G CSC D+W
Sbjct: 580 PLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 204/457 (44%), Gaps = 41/457 (8%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + SLI G +  G    A+  + E+   G++P+ FTFP    A         G Q+H   V
Sbjct: 26  WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 85

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K G   DVFV     + Y +     D R++FDE+ ERN+ +W + I        P+EA+ 
Sbjct: 86  KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 145

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F E       PNS+T    ++AC+   +L LG ++   +   G   +  + N L+D Y 
Sbjct: 146 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 205

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT--- 342
           KC  + +++ +F E   +N V   ++++ YV+     +A      +L    R D V    
Sbjct: 206 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA-----SVLYLRSRKDIVETSD 260

Query: 343 -MLSAV-SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            M+S+V SA A +  L  GR  H + ++  +E    + + ++DMY KCG  E + + FD 
Sbjct: 261 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 320

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  K +V+ NSLI G    G V+ A  +F EM  R          G T   M        
Sbjct: 321 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG--------CGPTPNYM-------- 364

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
                        T V + SAC   GA++    I+  +    GI    +  + +VDM  R
Sbjct: 365 -------------TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 411

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
            G  +RA +  ++M  +  +S W A   A  M G  +
Sbjct: 412 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 448



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 188/383 (49%), Gaps = 49/383 (12%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+K FD   + N  +   F+ NS+  G        EAI  ++E       P+  TF   L
Sbjct: 112 ARKLFDEIPERNLETWNAFISNSVTDGRP-----REAIEAFIEFRRIDGHPNSITFCAFL 166

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           NAC+       G+Q+HG +++ GFD DV V N LI+FYG+C  I     +F EM  +N V
Sbjct: 167 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 226

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW SL+ A  +    ++A  L+    ++ ++ +   +  V+SACA +  LELG  + A+ 
Sbjct: 227 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 286

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            +  ++    + +ALVDMY KCG ++ ++Q F E  ++NLV  N+++  Y   G    AL
Sbjct: 287 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL 346

Query: 326 AILDEMLLH--GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           A+ +EM     GP P+ +T +S +SA ++ G            + NG++ +DS+ +T   
Sbjct: 347 ALFEEMAPRGCGPTPNYMTFVSLLSACSRAG-----------AVENGMKIFDSMRST--- 392

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS-WNT 442
             ++ G +  +C                ++  L + G VE A E   +MP +  IS W  
Sbjct: 393 YGIEPGAEHYSC----------------IVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 436

Query: 443 M-----------LGGLTQENMFE 454
           +           LG L  EN+F+
Sbjct: 437 LQNACRMHGKPQLGLLAAENLFK 459



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/393 (20%), Positives = 151/393 (38%), Gaps = 63/393 (16%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K    ++A+ +      RN+V   +++S   + G    AL    EM   G  P+  T
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC------- 395
              A  A A L   + G+  H   ++         C  ++D+++ C   +M C       
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVK---------CGRILDVFVGCSAFDMYCKTRLRDD 111

Query: 396 --RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
             ++FD +  + + +WN+ I+  + +G    A E F E    D                 
Sbjct: 112 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG---------------- 155

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
                            + +T     +AC     L+L   ++  + ++G   D+ +   L
Sbjct: 156 ---------------HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 200

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +D + +C   + +  +F  M  ++  +W + + A       E+A  L+    +  ++   
Sbjct: 201 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 260

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHG------VSPQIVHYGCMVDLLGRAGLLGE 627
            +   VL+AC+  G+   G  L RS   IH       V   I     +VD+ G+ G + +
Sbjct: 261 FMISSVLSACA--GMA--GLELGRS---IHAHAVKACVERTIFVGSALVDMYGKCGCIED 313

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           +      MP E N V   SL+        VD+A
Sbjct: 314 SEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMA 345


>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/452 (45%), Positives = 292/452 (64%), Gaps = 2/452 (0%)

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH--ISWNTMLGGLTQENM 452
           C+I        ++    L+    K+G VE AR +F  M  R+   ++WNTM+    Q   
Sbjct: 54  CQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGE 113

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           F  A+ +F+ M SE +K   VTMV + SAC +LGALD+ +WI+ YI    +  D+ L  A
Sbjct: 114 FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 173

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+DM+ +CG  + A+ VF  + ++++  W + I  + M G GE+A+  F  M ++GIKPD
Sbjct: 174 LIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 233

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + FVG+L+ CSH GL++ G   F  M  ++G+ P + HYGCMVDLLGRAG L EAL+LI
Sbjct: 234 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 293

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           ++MP++PN ++ GSLL ACQ H++  +     +++ ELDP   G +V LSN+YAS  +W 
Sbjct: 294 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWD 353

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
           +V   R  M ++G+ K PG SSIEVN  VHEF +GD SHP+   I++ L E+   L+  G
Sbjct: 354 DVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQG 413

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           +VP+  NVL D++E+EK+  + +HSE++A+AFGL+ST     IRVVKNLR C DCHS  K
Sbjct: 414 HVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMK 473

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           L+S  + REIIVRD  RFH FR GSCSC+D+W
Sbjct: 474 LISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 505



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 15/289 (5%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           +LP K +F  +L +C  S     G   H  I+KMGF+ D+ ++  L++FY + G + + R
Sbjct: 26  VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEAR 85

Query: 194 RVFDEMSERNV--VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            +FD M+ERN   V+W ++I A  +      A+ +F +M  E +KP  VTMV ++SACA 
Sbjct: 86  NLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAH 145

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L  L++G+ +  YI    +K + ++ NAL+DMY KCGA++ A  +F     +N+   N+I
Sbjct: 146 LGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSI 205

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYV 366
           +      G   EA+A    M   G +PD VT +  +S  +  G L  G+     M   Y 
Sbjct: 206 IVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYG 265

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L  G+E +      M+D+  + G  + A  +   M  K     NS++ G
Sbjct: 266 LEPGVEHY----GCMVDLLGRAGYLKEALELIRAMPMKP----NSMVLG 306



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 34/307 (11%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+   + P+  +   ++ +CA     +LG+     I ++G + + ++   L+D Y K G 
Sbjct: 21  MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGY 80

Query: 290 VDTAKQLFGECKDRNL--VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           V+ A+ LF    +RN   V  NT++S YV+ G    A+++  +M     +P  VTM+S +
Sbjct: 81  VEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLL 140

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           SA A LG L  G   HGY+    L+    + N +IDMY KCG  E A  +F  +S K + 
Sbjct: 141 SACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIF 200

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
            WNS+I GL  NG                                 EEA+  F VM  E 
Sbjct: 201 CWNSIIVGLGMNGRG-------------------------------EEAIAAFIVMEKEG 229

Query: 468 IKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
           IK D VT VG+ S C + G L    ++    +   G+   ++    +VD+  R G  + A
Sbjct: 230 IKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEA 289

Query: 527 MQVFRRM 533
           +++ R M
Sbjct: 290 LELIRAM 296



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 13/249 (5%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           HC I+K G  +     + ++   A+ G  E    A+  FD   + N  S T   +N++I 
Sbjct: 53  HCQIMKMGFEYDMILQTGLLDFYAKHGYVEE---ARNLFDNMTERNSNSVT---WNTMIS 106

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
            Y   G    AIS++ ++    + P + T   +L+AC    A   G  +HG I       
Sbjct: 107 AYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKI 166

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           DV + N LI+ Y +CG +     VF  +S +N+  W S+I         +EA+  F  M 
Sbjct: 167 DVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVME 226

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----GMKANALMVNALVDMYMKC 287
           +EGIKP+ VT V ++S C+    L  G R   Y  E+    G++        +VD+  + 
Sbjct: 227 KEGIKPDGVTFVGILSGCSHSGLLSAGQR---YFSEMLGVYGLEPGVEHYGCMVDLLGRA 283

Query: 288 GAVDTAKQL 296
           G +  A +L
Sbjct: 284 GYLKEALEL 292



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 6/127 (4%)

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
           ++++  + + A+ G  +       ++++ G + D I+  G+L   +  G V +  +LF +
Sbjct: 31  TSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDN 90

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQ 655
           MT+ +  S   V +  M+    + G  G A+ + + M    V+P +V   SLL+AC    
Sbjct: 91  MTERNSNS---VTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLG 147

Query: 656 NVDIAAY 662
            +D+  +
Sbjct: 148 ALDMGEW 154


>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
 gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
 gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
 gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 586

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/473 (43%), Positives = 315/473 (66%), Gaps = 6/473 (1%)

Query: 377 ICNTMIDMYMKCGKQEMACRI-FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           + N+++ +Y   G  + A R+ +   +   VVSWN++++G  K GD+ +AREVF+ MP R
Sbjct: 115 VTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPER 174

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           + +SW+ M+    +   F EA+ +F  M+ E  + D V +V V  AC +LGA++  +W++
Sbjct: 175 NLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVH 234

Query: 496 AYIEKN---GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            Y+E     G   ++ L TALVDM+ +CG  + A QVF  + +RDV  W A IG +AM G
Sbjct: 235 RYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNG 294

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            GE+A+ELF  ML++G  P+   F+ VL AC+H G V++G  +F+SM D +G+ PQ  HY
Sbjct: 295 YGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREHY 353

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GC+ DLLGRAG + EA  L+  MP+EP+   WG+L+++CQ H ++++     +R+ EL+P
Sbjct: 354 GCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEP 413

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
              G +V+L N+YA  G+W     +R  M+++G +K  G S IE+NG VHEF SGD  HP
Sbjct: 414 YDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHP 473

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL-LSHHSEKLAMAFGLISTSK 791
               I ++L ++  RL+  GYV D + V++D+D++E K + LS+HSE+LA+AFG+++  +
Sbjct: 474 LTRKIYALLEDIERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQ 533

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +PIR+VKNLR+C DCH  +KLVSK+Y+REIIVRD +RFH FR G CSC+D+W
Sbjct: 534 GVPIRIVKNLRVCRDCHVHSKLVSKLYEREIIVRDRHRFHVFRDGVCSCNDYW 586



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 35/284 (12%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           DV   N +++ YG+ GD+   R VF  M ERN+VSW++++ AC R     EA+++F  M+
Sbjct: 144 DVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMM 203

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE---LGMKANALMVNALVDMYMKCG 288
            E  +P+ V +V V+ ACA L  +E G  V  Y++     G + N ++  ALVDMY KCG
Sbjct: 204 REEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCG 263

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            ++ A Q+F     R++VL N ++      G    AL +   ML  G  P+  T ++ + 
Sbjct: 264 CMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLC 323

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A    G +  G+                +  +M D  +K  ++   C             
Sbjct: 324 ACTHTGRVDEGK---------------RVFKSMQDYGIKPQREHYGC------------- 355

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHIS-WNTMLGGLTQEN 451
              L   L + G+VE A  +  +MP   H S W  ++      N
Sbjct: 356 ---LADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHN 396



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 139/318 (43%), Gaps = 42/318 (13%)

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +L L DR    +   G   + +  N +V  Y K G +  A+++F    +RNLV  + ++ 
Sbjct: 125 SLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVSWSAMVD 184

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR---NG 370
             VR G   EAL + D M+    RPD V ++S + A A LG +  GR  H Y+      G
Sbjct: 185 ACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGG 244

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
             G   +   ++DMY KCG  E A ++FD +  + VV WN++I GL  NG          
Sbjct: 245 RRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNG---------- 294

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                                  E A+ELFR ML +    +  T + V  AC + G +D 
Sbjct: 295 ---------------------YGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDE 333

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMA 549
            K ++  ++  GI    +    L D+  R G+ + A  +   M  +   S W A + +  
Sbjct: 334 GKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQ 393

Query: 550 MEGN-------GEQAVEL 560
           M  +       G++ +EL
Sbjct: 394 MHNDINVGERVGKRLIEL 411



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 1/124 (0%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           + + D      + ++N++I G +  G G  A+ L+  +   G +P++ TF  VL ACT +
Sbjct: 269 WQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHT 328

Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSL 210
               EG +V  ++   G         CL +  G  G++ +   +  +M  E +   W +L
Sbjct: 329 GRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGAL 388

Query: 211 ICAC 214
           + +C
Sbjct: 389 MSSC 392


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/741 (34%), Positives = 384/741 (51%), Gaps = 69/741 (9%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  +L  C        G  +H   +K       +  N  I  Y +CG +   R+ F ++S
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 201 ERNVVSWTSLICACARRDLP-------------------------------KEAVYLFFE 229
           + NV S+ ++I A A+   P                                 A+ LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M E G+  +  T+  VI+AC    ++ L  ++ +     G  +   + NAL+  Y K G 
Sbjct: 131 MREMGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 290 VDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +D AK++F G    R+ V  N+++  Y +     +AL +  EM+  G   D  T+ S ++
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A   L DL  G   HG +++ G      + + +ID+Y KCG                   
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG------------------- 289

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ-ENMFEEAMELFRVMLSER 467
                      G +   R+VF E+   D + WNTM+ G +Q E   E+A+E FR M    
Sbjct: 290 -----------GGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD-MQLATALVDMFARCGDPQRA 526
            + +  + V V SAC  L +    K I++   K+ I  + + +  AL+ M+++CG+ Q A
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDA 398

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            ++F RM + +  +  + I   A  G   +++ LF  ML + I P SI F+ VL+AC+H 
Sbjct: 399 RRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHT 458

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           G V +GW+ F  M +   + P+  HY CM+DLLGRAG L EA +LI  MP  P  + W S
Sbjct: 459 GRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWAS 518

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+ H N+++A  AA ++ +L+P  +  +V+LSN+YASAG+W  VA VR  M+++G+
Sbjct: 519 LLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGV 578

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
           +K PG S IEV  ++H F + D SHP +  I   L EM+ +++ AGYVPD+   L+  D 
Sbjct: 579 KKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDG 638

Query: 767 Q---EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
               EK+  L HHSEKLA+AFGLIST    P+ VVKNLR+C DCH+  K +S +  REI 
Sbjct: 639 TRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREIT 698

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD +RFH F++G CSC D+W
Sbjct: 699 VRDAHRFHCFKEGQCSCGDYW 719



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 227/478 (47%), Gaps = 41/478 (8%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D      L  YN+LI  Y+  G    A+ L+  +   G+  D FT   V+ AC      G
Sbjct: 98  DQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDD--VG 155

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE-RNVVSWTSLICAC 214
              Q+H   V  GFD  V V N L+ +YG+ GD+ D +RVF  M   R+ VSW S+I A 
Sbjct: 156 LIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAY 215

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +     +A+ LF EMV  G+  +  T+  V++A   L++L  G +    + + G   N+
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 275 LMVNALVDMYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNYVR-LGLAREALAILDEML 332
            + + L+D+Y KC G +   +++F E  + +LVL NT++S Y +      +AL    +M 
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQ 391
             G RP+  + +  +SA + L     G+  H   L++ +     S+ N +I MY KCG  
Sbjct: 336 GIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNL 395

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
           + A R+FD M+    VS NS+IAG  ++G          EM                   
Sbjct: 396 QDARRLFDRMAEHNTVSLNSMIAGYAQHG---------IEM------------------- 427

Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI--EKNGIHCDMQL 509
              E++ LF+ ML  +I    +T + V SAC + G ++   W Y  +  EK  I  + + 
Sbjct: 428 ---ESLHLFQWMLERQIAPTSITFISVLSACAHTGRVE-EGWNYFNMMKEKFNIEPEAEH 483

Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMAMEGNGEQAVELFNEMLR 566
            + ++D+  R G    A  +  RM     S  W + +GA    GN E AV+  N++L+
Sbjct: 484 YSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/708 (33%), Positives = 384/708 (54%), Gaps = 33/708 (4%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L+ C ++ + G    VHG + K G   D+FV   L+N Y  C    D RR+FD M ERN
Sbjct: 84  LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERN 143

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VV+WT+L+        P   + +F EM+E G  P+  T+   ++AC    +++LG +V  
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS------NYVR 317
           Y  + G ++   M N+L  +Y K G++D+A + F    ++N++   T++S        V 
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           LG     +++  +ML+ G  P+  T+ S +S      DL  G+    +  + G E    +
Sbjct: 264 LG-----MSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPV 318

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N+ + +Y++ G+ + A R+F+ M + ++++WN++I+G  +  D  SA++          
Sbjct: 319 KNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMD--SAKD---------- 366

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                    L   +   +A+ +FR +    +K D  T   + S C  + AL+  + I+A 
Sbjct: 367 --------DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQ 418

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             K+G   D+ + +ALV+M+ +CG  Q A + F  M  R    WT+ I   +  G  ++A
Sbjct: 419 TIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEA 478

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           ++LF EM   G++P+ I FV +L+ACS+ GLV +  H F  M   + + P + HYGCM+D
Sbjct: 479 IQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMID 538

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           +  R G + +A   IK    EPN+ IW SL+A C+ H N+++A YAA+++ EL P+    
Sbjct: 539 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIET 598

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           ++LL N+Y S  +W +VARVR  MK++ +  L   S I +  KV+ F + D +HP+   +
Sbjct: 599 YILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATEL 658

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL--LSHHSEKLAMAFGLISTSKTMPI 795
             +L  +  + +  GY P     L D ++ EK     L HHSE+LA+A GL+ T     +
Sbjct: 659 YQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATV 718

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           RV KN+ +C DCHS  KL S + +REIIVRD+ R H F+ G CSC DF
Sbjct: 719 RVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 234/503 (46%), Gaps = 52/503 (10%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD   + N     +  + +L+ GY+        + ++VE+   G  P  +T    L
Sbjct: 132 ARRLFDGMPERN-----VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 186

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           NAC  S     G QVHG  +K G +    + N L + Y + G +    R F  + E+NV+
Sbjct: 187 NACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVI 246

Query: 206 SWTSLICACARRDLPKE-AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +WT++I ACA  +   E  + LF +M+ +G+ PN  T+  V+S C    +L LG +V A+
Sbjct: 247 TWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL------ 318
             ++G + N  + N+ + +Y++ G  D A +LF + +D +++  N ++S Y ++      
Sbjct: 307 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD 366

Query: 319 -----GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
                    +AL I  ++     +PD  T  S +S  + +  L  G   H   +++G   
Sbjct: 367 DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 426

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + + +++MY KCG  + A + F  M  +T V+W S+I+G  ++G  + A ++F EM 
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM- 485

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                     L G                     ++ + +T V + SAC Y G ++ A+ 
Sbjct: 486 ---------RLAG---------------------VRPNEITFVSLLSACSYAGLVEEAEH 515

Query: 494 IYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAME 551
            +  ++K   I   +     ++DMF R G  + A    +R   + + + W++ +      
Sbjct: 516 YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSH 575

Query: 552 GNGEQAVELFNEMLRQGIKPDSI 574
           GN E A    +++L   +KP  I
Sbjct: 576 GNMELAFYAADKLLE--LKPKGI 596



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 187/436 (42%), Gaps = 43/436 (9%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+ EG    S   V ++  C +  +L     V  ++ + G  A+  +  +LV+ YM+C A
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
              A++LF    +RN+V    +++ Y         L +  EML  G  P   T+ + ++A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
                D+  G+  HGY ++ G E   S+ N++  +Y K G  + A R F  +  K V++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            ++I+   ++                              E   E  M LF  ML + + 
Sbjct: 249 TTMISACAED------------------------------EECVELGMSLFIDMLMDGVM 278

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            +  T+  V S CG    L+L K + A+  K G   ++ +  + + ++ R G+   AM++
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRL 338

Query: 530 FRRMEKRDVSAWTAAIGAMAM-----------EGNGEQAVELFNEMLRQGIKPDSIVFVG 578
           F +ME   +  W A I   A               G QA+ +F ++ R  +KPD   F  
Sbjct: 339 FEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSS 398

Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
           +L+ CS    + QG  +  + T   G    +V    +V++  + G + +A      MP  
Sbjct: 399 ILSVCSAMMALEQGEQI-HAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTR 457

Query: 639 PNDVIWGSLLAACQKH 654
              V W S+++   +H
Sbjct: 458 -TFVTWTSMISGYSQH 472


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/706 (34%), Positives = 383/706 (54%), Gaps = 36/706 (5%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  ++  C    +  +  ++    +K GF   +   N LI+ Y +CG +V  R+VFDE+ 
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            R++V+W S+I +  R    KEA+ ++  MV +GI P+  T   V  A + L  +  G R
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197

Query: 261 VCAYIDELGMK-ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
                  LG+  +N  + +ALVDMY K G +  A+ +  +   +++VL   ++  Y   G
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
              E+L +   M   G   +  T+ S +     L DL  GR+ HG +++ GLE   +   
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQT 317

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +++ MY +CG                                V+ + +VF +    + ++
Sbjct: 318 SLLTMYYRCGL-------------------------------VDDSLKVFKQFINPNQVT 346

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           W +++ GL Q    E A+  FR ML   I  +  T+  V  AC  L  L+  K I+A + 
Sbjct: 347 WTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVM 406

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G+  D  +  AL+D + +CG  + A  VF  + + DV +  + I + A  G G +A++
Sbjct: 407 KFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQ 466

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF+ M   G++P+++ ++GVL+AC++ GL+ +G H+F S  +   +     HY CMVDLL
Sbjct: 467 LFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLL 526

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L EA  LI  + +  + VIW +LL+AC+ H +V++A     R+ +L PE  G HV
Sbjct: 527 GRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHV 585

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN+YAS G W+ V  ++  M+E  ++K P  S ++V  ++H F +GD SHP   +I  
Sbjct: 586 LLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIRE 645

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI-STSKTMPIRVV 798
            L E+  ++++ GYVPD   VL D+DE++K   L +HSEKLA+AF L  S  K   IR++
Sbjct: 646 KLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRIL 705

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH++ K VSK+  R+II RD  RFH FR G CSC D+W
Sbjct: 706 KNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 244/525 (46%), Gaps = 43/525 (8%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           K++ ++ +   H LK+G  H  S  +K++    + G   S+ YA+K FD     +     
Sbjct: 91  KSITDITKIQSHALKRGFHH--SLGNKLIDAYLKCG---SVVYARKVFDEVPHRH----- 140

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +  +NS+I  Y   G   EAI +Y  +   GILPD+FTF  V  A +      EG + HG
Sbjct: 141 IVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG 200

Query: 163 AIVKMGFD-RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             V +G    +VFV + L++ Y + G + D R V D++  ++VV +T+LI   +      
Sbjct: 201 QSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDG 260

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           E++ +F  M ++GI+ N  T+  V+  C  L++L  G  +   I + G+++      +L+
Sbjct: 261 ESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLL 320

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            MY +CG VD + ++F +  + N V   +++   V+ G    AL    +ML     P+  
Sbjct: 321 TMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSF 380

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+ S + A + L  L  G+  H  V++ GL+    +   +ID Y KCG  E+A  +F+ +
Sbjct: 381 TLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 440

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
               VVS NS+I    +NG                                  EA++LF 
Sbjct: 441 LEVDVVSVNSMIYSYAQNG-------------------------------FGHEALQLFS 469

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARC 520
            M    ++ + VT +GV SAC   G L+    I++    +G I         +VD+  R 
Sbjct: 470 GMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRA 529

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           G  + A  +  ++   DV  W   + A  + G+ E A  + N ++
Sbjct: 530 GRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVI 574



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 6/202 (2%)

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           +  +++ ++ ++E I+  ++    +    G     D+ K I ++  K G H    L   L
Sbjct: 60  QSNIKIRKLCITETIQSTKLYSSLIQQCIGIKSITDITK-IQSHALKRGFH--HSLGNKL 116

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           +D + +CG    A +VF  +  R + AW + I +    G  ++A++++  M+  GI PD 
Sbjct: 117 IDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDE 176

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLGRAGLLGEALDLI 632
             F  V  A S  GLV++G       + + GV    V  G  +VD+  + G + +A  L+
Sbjct: 177 FTFSSVFKAFSDLGLVHEGQRA-HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA-RLV 234

Query: 633 KSMPVEPNDVIWGSLLAACQKH 654
               V  + V++ +L+     H
Sbjct: 235 SDQVVGKDVVLFTALIVGYSHH 256


>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
 gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
 gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
 gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
          Length = 544

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/480 (45%), Positives = 313/480 (65%), Gaps = 7/480 (1%)

Query: 369 NGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           +G+   D++  N+MI  +   G    A R+F+ + + T V+W S++AGL + GDV +AR 
Sbjct: 68  DGMSHRDTVSFNSMIHAHAMSGDVVSARRLFERVPSPTPVTWTSMVAGLCRAGDVAAARR 127

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +F EMP RD +SWN M+ GL       EA+ LFR M++E    +R T++   +AC   GA
Sbjct: 128 LFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAEGFAPNRGTVLSALAACAGAGA 187

Query: 488 LDLAKWIYAYIEKNGIH--CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAI 545
           L+  KWI+A++E+  +    D  L TAL+DM+A+CG  + A+ VF ++  R+   W A I
Sbjct: 188 LETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELALDVFTKLRSRNTCTWNAMI 247

Query: 546 GAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
             +AM G   +A+++F +M L + + PD + FVGVL ACSHGG V+ G   F  +   +G
Sbjct: 248 NGLAMNGYSAKALDMFRKMELDRTVVPDEVTFVGVLLACSHGGFVDVGREHFHMIEKKYG 307

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           +   + HY CMVDLL R+G L EA  +I  MP++P+ V+W +LL  C+ H++V +A  A 
Sbjct: 308 IRLILEHYACMVDLLARSGHLQEAHKIIAGMPMKPDAVVWRALLGGCRLHKDVKMAETA- 366

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
             I+E++   SG HVLLSN+YA+ G+W+ V  VR  M+ +GI K+PG SSIE+N  +HEF
Sbjct: 367 --ISEMEATCSGDHVLLSNLYAAVGRWSGVEDVRRTMRSKGIEKIPGCSSIEINDSIHEF 424

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            SGD+SHP  N+I + L E++ R++  GYV +   V  DV+E+EK+  L HHSEKLA+AF
Sbjct: 425 VSGDKSHPSYNDIHAKLAEISARMQQQGYVTETAEVFYDVEEEEKEQALGHHSEKLAIAF 484

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GLI     + IR+VKNLR C DCH FAKLVS++Y  EI+VRD  RFH F +G+CSC+DFW
Sbjct: 485 GLIGGPPNVAIRIVKNLRFCADCHKFAKLVSQIYHWEIVVRDRARFHHFTEGACSCNDFW 544



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 178/410 (43%), Gaps = 75/410 (18%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  +VK+G      V N LI  Y   G + D RRVFD MS R+ VS+ S+I A A    
Sbjct: 31  LHALLVKLGLQPYARVHNALIQAYAASGLVDDARRVFDGMSHRDTVSFNSMIHAHAMSGD 90

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
              A  LF    E    P  VT   +++             +C                 
Sbjct: 91  VVSARRLF----ERVPSPTPVTWTSMVAG------------LC----------------- 117

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
                 + G V  A++LF E   R+LV  N +MS         EAL +   M+  G  P+
Sbjct: 118 ------RAGDVAAARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAEGFAPN 171

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL-EGWDSICNT-MIDMYMKCGKQEMACRI 397
           R T+LSA++A A  G L  G+  H +V R  L   WD    T ++DMY KCG  E+A  +
Sbjct: 172 RGTVLSALAACAGAGALETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELALDV 231

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F  + ++   +WN++I GL  NG   SA+                             A+
Sbjct: 232 FTKLRSRNTCTWNAMINGLAMNG--YSAK-----------------------------AL 260

Query: 458 ELFRVMLSERIKV-DRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVD 515
           ++FR M  +R  V D VT VGV  AC + G +D+ +  +  IEK  GI   ++    +VD
Sbjct: 261 DMFRKMELDRTVVPDEVTFVGVLLACSHGGFVDVGREHFHMIEKKYGIRLILEHYACMVD 320

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
           + AR G  Q A ++   M  K D   W A +G   +  + + A    +EM
Sbjct: 321 LLARSGHLQEAHKIIAGMPMKPDAVVWRALLGGCRLHKDVKMAETAISEM 370



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 16/294 (5%)

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           GD+   RR+F+EM  R++VSW +++   A    P EA+ LF  M+ EG  PN  T++  +
Sbjct: 120 GDVAAARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAEGFAPNRGTVLSAL 179

Query: 247 SACAKLQNLELGDRVCAYID--ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           +ACA    LE G  + A+++   L    +  +  AL+DMY KCGAV+ A  +F + + RN
Sbjct: 180 AACAGAGALETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELALDVFTKLRSRN 239

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLL-HGPRPDRVTMLSAVSASAQLGDLLCGR--- 360
               N +++     G + +AL +  +M L     PD VT +  + A +  G +  GR   
Sbjct: 240 TCTWNAMINGLAMNGYSAKALDMFRKMELDRTVVPDEVTFVGVLLACSHGGFVDVGREHF 299

Query: 361 --MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLI 417
             +   Y +R  LE +      M+D+  + G  + A +I   M  K   V W +L+ G  
Sbjct: 300 HMIEKKYGIRLILEHY----ACMVDLLARSGHLQEAHKIIAGMPMKPDAVVWRALLGGCR 355

Query: 418 KNGDVESAREVFSEMPGR---DHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
            + DV+ A    SEM      DH+  + +   + + +  E+     R    E+I
Sbjct: 356 LHKDVKMAETAISEMEATCSGDHVLLSNLYAAVGRWSGVEDVRRTMRSKGIEKI 409



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 4/200 (2%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  +N+++ G +     VEA+ L+  +   G  P++ T    L AC  + A   G  +H 
Sbjct: 137 LVSWNAMMSGLAGNRRPVEALCLFRRMMAEGFAPNRGTVLSALAACAGAGALETGKWIHA 196

Query: 163 AIVKMGFDR--DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
            + +    R  D F+   L++ Y +CG +     VF ++  RN  +W ++I   A     
Sbjct: 197 FVERKRLFRWWDEFLGTALLDMYAKCGAVELALDVFTKLRSRNTCTWNAMINGLAMNGYS 256

Query: 221 KEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID-ELGMKANALMVN 278
            +A+ +F +M ++  + P+ VT V V+ AC+    +++G      I+ + G++       
Sbjct: 257 AKALDMFRKMELDRTVVPDEVTFVGVLLACSHGGFVDVGREHFHMIEKKYGIRLILEHYA 316

Query: 279 ALVDMYMKCGAVDTAKQLFG 298
            +VD+  + G +  A ++  
Sbjct: 317 CMVDLLARSGHLQEAHKIIA 336


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/610 (36%), Positives = 342/610 (56%), Gaps = 32/610 (5%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           + P        I+ACA+ +NL+   ++  ++     + +A + N+L+ +Y KCG+V  A 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           ++F + + +++V   ++++ Y +  +  EA+ +L  ML    +P+  T  S + A+    
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           D   G   H   ++        + + ++DMY +CGK +MA  +FD + +K          
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK---------- 216

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
               NG                 +SWN ++ G  ++   E A+ +F  M     +    T
Sbjct: 217 ----NG-----------------VSWNALISGFARKGDGETALMVFAEMQRNGFEATHFT 255

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              + S    +GAL+  KW++A++ K+       +   ++DM+A+ G    A +VF R+ 
Sbjct: 256 YSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVL 315

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
            +D+  W + + A A  G G++AV  F EM + GI  + I F+ +LTACSHGGLV +G H
Sbjct: 316 NKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKH 375

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            F  M   + + P+I HY  +VDLLGRAGLL  AL  I  MP+EP   +WG+LLAAC+ H
Sbjct: 376 YF-DMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434

Query: 655 QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
           +N  +  +AA+ + +LDP+ SG  VLL NIYAS G W   ARVR  MK  G++K P  S 
Sbjct: 435 KNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSW 494

Query: 715 IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
           +E+   VH F + D++HP    I  M  E++ ++R  GYVPD+  VLL VDEQE++  L 
Sbjct: 495 VEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQ 554

Query: 775 HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           +HSEK+A+AF LI       IR++KN+R+C DCHS  K +SKV++REI+VRD NRFH F 
Sbjct: 555 YHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFS 614

Query: 835 QGSCSCSDFW 844
            GSCSC D+W
Sbjct: 615 NGSCSCGDYW 624



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 201/423 (47%), Gaps = 32/423 (7%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P    +   + AC +S    +  ++HG +    F+ D F++N LI+ Y +CG +V+  
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           +VFD+M ++++VSWTSLI   A+ D+P EA+ L   M++   KPN  T   ++ A     
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +  +G ++ A   +     +  + +AL+DMY +CG +D A  +F +   +N V  N ++S
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            + R G    AL +  EM  +G      T  S  S  A +G L  G+  H +++++  + 
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              + NTM+DMY K G    A ++F+ + NK +V+WNS                      
Sbjct: 287 TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNS---------------------- 324

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                    ML    Q  + +EA+  F  M    I ++++T + + +AC + G +   K 
Sbjct: 325 ---------MLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKH 375

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEG 552
            +  I++  +  +++    +VD+  R G    A+    +M     +A W A + A  M  
Sbjct: 376 YFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHK 435

Query: 553 NGE 555
           N +
Sbjct: 436 NAK 438



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 19/406 (4%)

Query: 36  IGSLKNCKTLNELKQPHCHILK---QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           I +    K L++ ++ H H+     +G     + +  + C C       S+  A K FD 
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCG------SVVEAHKVFDK 111

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
             K +  S T     SLI GY+   +  EAI L   +      P+ FTF  +L A    +
Sbjct: 112 MRKKDMVSWT-----SLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
             G G Q+H   VK  +  DV+V + L++ Y  CG +     VFD++  +N VSW +LI 
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             AR+   + A+ +F EM   G +    T   + S  A +  LE G  V A++ +   K 
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
            A + N ++DMY K G++  A+++F    +++LV  N++++ + + GL +EA++  +EM 
Sbjct: 287 TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR 346

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G   +++T L  ++A +  G +  G+     +    LE       T++D+  + G   
Sbjct: 347 KSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLN 406

Query: 393 MA-CRIFDHMSNKTVVSWNSLIAG--LIKNGDVE--SAREVFSEMP 433
            A   IF      T   W +L+A   + KN  V   +A  VF   P
Sbjct: 407 YALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP 452


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/630 (36%), Positives = 358/630 (56%), Gaps = 35/630 (5%)

Query: 229 EMVEEGIKPNS--VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           E++ +  KP+    T   V+  CA L++++ G R+ + I    ++ + ++ + LV MY+ 
Sbjct: 89  ELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVT 148

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           CG +   +++F +  +  + L N +M+ Y ++G  RE+L++   M   G R  RV   SA
Sbjct: 149 CGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIR--RVE--SA 204

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM----- 401
                +LGD               +  W    N+MI  Y+  G  E    +F+ M     
Sbjct: 205 RKLFDELGD-------------RDVISW----NSMISGYVSNGLSEKGLDLFEQMLLLGI 247

Query: 402 --SNKTVVSW-----NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                T+VS      N L+    K+G++ SA +VF  M  R  +SW +M+ G  +E + +
Sbjct: 248 NTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSD 307

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
            ++ LF  M  E +  + +TM  +  AC  L AL+  + I+ +I +NG   D  +A ALV
Sbjct: 308 MSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALV 367

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+ +CG    A  +F  + ++D+ +WT  I    M G G +A+  FNEM   GI+PD +
Sbjct: 368 DMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEV 427

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ +L ACSH GL+++GW  F  M +   + P+  HY C+VDLL RAG L +A   IK 
Sbjct: 428 SFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKM 487

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+EP+  IWG+LL  C+ + +V +A   AE + EL+PE +G +VLL+NIYA A KW  V
Sbjct: 488 MPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEV 547

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
            ++R ++  +G+RK PG S IE+ GKVH F +GD SHP  N I  +L++   R+++ G+ 
Sbjct: 548 KKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHF 607

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           P +   L+  D+ EK+  L  HSEK+AMAFG++S      +RV KNLR+C DCH  AK +
Sbjct: 608 PKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFM 667

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SK+  R+II+RD+NRFH F+ GSCSC   W
Sbjct: 668 SKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 179/362 (49%), Gaps = 30/362 (8%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILP--------------DKF 139
           I D   +  +F++N L+ GY+ IG   E++SL+  +   GI                D  
Sbjct: 158 IFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVI 217

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD----VFVE----NCLINFYGECGDIVD 191
           ++  +++    +    +G+ +   ++ +G + D    V VE    NCL++ Y + G++  
Sbjct: 218 SWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNS 277

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
             +VF+ M ER+VVSWTS+I   AR  L   +V LF EM +E + PNS+TM C++ ACA 
Sbjct: 278 AIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACAS 337

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L  LE G  +  +I   G   +  + NALVDMY+KCGA+  A+ LF    +++LV    +
Sbjct: 338 LAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVM 397

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY--VLRN 369
           ++ Y   G   EA+A  +EM   G  PD V+ +S + A +  G L  G    G+  ++RN
Sbjct: 398 IAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG---WGFFNMMRN 454

Query: 370 G--LEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAR 426
              +E        ++D+  + G    A +    M        W +L+ G     DV+ A 
Sbjct: 455 NCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAE 514

Query: 427 EV 428
           +V
Sbjct: 515 KV 516



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 228/536 (42%), Gaps = 93/536 (17%)

Query: 46  NELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           N L  P+  I  +     P   S +  +CA +GT        +  D  I D         
Sbjct: 23  NSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTS---VLPSETIDCKITD--------- 70

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHGA 163
           YN  I  +  +G     +   +EL      PD    T+  VL  C    +  +G ++H  
Sbjct: 71  YNIEICRFCELG----NLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSI 126

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           I     + D  + + L+  Y  CGD+ +GRR+FD+++   V  W  L+   A+    +E+
Sbjct: 127 IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRES 186

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR--------VCAYIDE-------- 267
           + LF  M E GI+         + +  KL + ELGDR        +  Y+          
Sbjct: 187 LSLFKRMRELGIRR--------VESARKLFD-ELGDRDVISWNSMISGYVSNGLSEKGLD 237

Query: 268 -------LGMKAN-ALMV-------NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
                  LG+  + A MV       N L+DMY K G +++A Q+F    +R++V   +++
Sbjct: 238 LFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMI 297

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           + Y R GL+  ++ +  EM      P+ +TM   + A A L  L  G+  HG++LRNG  
Sbjct: 298 AGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFS 357

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + N ++DMY+KCG   +A  +FD +  K +VSW  +IAG   +G            
Sbjct: 358 LDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG------------ 405

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                                 EA+  F  M +  I+ D V+ + +  AC + G LD   
Sbjct: 406 -------------------YGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLD-EG 445

Query: 493 WIYAYIEKNG--IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
           W +  + +N   I    +    +VD+ AR G+  +A +  + M  + D + W A +
Sbjct: 446 WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501


>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71420-like [Glycine max]
          Length = 782

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 265/762 (34%), Positives = 408/762 (53%), Gaps = 66/762 (8%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           ++ IR  S  G   EA+SL    +   +     T+  + +AC +      G+ +H  ++ 
Sbjct: 63  DAQIRALSTQGNIEEALSLLYTHSSLSLQ----TYASLFHACAQKKCLQHGMTLHHYVLH 118

Query: 167 MG--FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
                  DVF+ N +IN Y +CG +   R VFD+MS RN+VSWT+LI   A+  L +E  
Sbjct: 119 KDPTIQNDVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTALISGHAQSGLVRECF 178

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            LF  ++    +PN      ++SAC +  +++ G +V A   ++ + AN  + N+L+ MY
Sbjct: 179 SLFSGLLAH-FRPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLDANVYVANSLITMY 236

Query: 285 MKCGAV--------DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            K            D A  +F   + RNLV  N++++ +   GL  +A+ +   M  +G 
Sbjct: 237 SKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGI 296

Query: 337 RPDRVTMLSAVSASAQLG--DLLCG--RMC---HGYVLRNGLEGWDSICNTMIDMYMKCG 389
             DR T+LS  S+  + G  D++    R C   H   +++GL     +   +I  Y   G
Sbjct: 297 GFDRATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLG 356

Query: 390 KQEMAC-RIF-DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
                C RIF D  S   +VSW +LI+             VF+E   RD           
Sbjct: 357 GHISDCYRIFHDTSSQLDIVSWTALIS-------------VFAE---RDP---------- 390

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
                 E+A  LF  +  +    D  T      AC Y      A  I++ + K G   D 
Sbjct: 391 ------EQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDT 444

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            L  AL+  +ARCG    + QVF  M   D+ +W + + + A+ G  + A+ELF +M   
Sbjct: 445 VLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQM--- 501

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
            + PDS  FV +L+ACSH GLV++G  LF SM+D HGV PQ+ HY CMVDL GRAG + E
Sbjct: 502 NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFE 561

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A +LI+ MP++P+ VIW SLL +C+KH    +A  AA++  EL+P  S  +V +SNIY+S
Sbjct: 562 AEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNIYSS 621

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
            G +T    +R +M +  +RK PG S +E+  +VHEF SG + HP    I S L  +  +
Sbjct: 622 GGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQ 681

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP-----IRVVKNLR 802
           L++ GYVP+L+  L D + + K+  L HHSEK+A+ F +++   ++P     I+++KN+R
Sbjct: 682 LKEMGYVPELSLALYDTEVEHKEDQLFHHSEKMALVFAIMNEG-SLPCGGNVIKIMKNIR 740

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH+F KL S ++ +EI+VRD+NRFH F+  +CSC+D+W
Sbjct: 741 ICVDCHNFMKLASYLFQKEIVVRDSNRFHRFKYATCSCNDYW 782



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 120/248 (48%), Gaps = 11/248 (4%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q HC  +K GL  +   ++ ++ + A +G   S  Y          D  +   +  + +L
Sbjct: 328 QLHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYR------IFHDTSSQLDIVSWTAL 381

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
           I  ++      +A  L+ +L     LPD +TF   L AC         + +H  ++K GF
Sbjct: 382 ISVFAERD-PEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGF 440

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
             D  + N L++ Y  CG +    +VF+EM   ++VSW S++ + A     K+A+ LF +
Sbjct: 441 QEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQ 500

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCG 288
           M    + P+S T V ++SAC+ +  ++ G ++   + D+ G+       + +VD+Y + G
Sbjct: 501 M---NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAG 557

Query: 289 AVDTAKQL 296
            +  A++L
Sbjct: 558 KIFEAEEL 565


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/748 (33%), Positives = 382/748 (51%), Gaps = 67/748 (8%)

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           L  F   P  F    +L A  KS       +V   +     D ++F  N L++       
Sbjct: 39  LKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRL 94

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVIS 247
           + D  R+F  M ER+ VS+ +LI   +    P  +V L+  ++ EE ++P  +T+  +I 
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
             + L +  LG  V   +  LG  A A + + LVDMY K G +  A+++F E + + +V+
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 308 CNTIMSNYVRL-------------------------------GLAREALAILDEMLLHGP 336
            NT+++  +R                                GL  EAL +   M   G 
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
             D+ T  S ++A   L     G+  H Y+ R   E    + + ++DMY KC        
Sbjct: 275 GIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS------ 328

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    +  A  VF  M  R+ ISW  M+ G  Q    EEA
Sbjct: 329 -------------------------IRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEA 363

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +  F  M  + IK D  T+  V S+C  L +L+     +     +G+   + ++ ALV +
Sbjct: 364 VRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTL 423

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + +CG  + A ++F  M   D  +WTA +   A  G  ++ ++LF +ML  G+KPD + F
Sbjct: 424 YGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTF 483

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVL+ACS  GLV +G   F SM   H + P   HY CM+DL  R+G   EA + IK MP
Sbjct: 484 IGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
             P+   W +LL++C+   N++I  +AAE + E DP+    +VLL +++A+ G+WT VA 
Sbjct: 544 HSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAH 603

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           +R  M+++ ++K PG S I+   KVH F++ D+SHP  + I   L  +N ++ + GY PD
Sbjct: 604 LRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPD 663

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
           +++VL DV + +K +++SHHSEKLA+AFGLI   + MPIR+VKNLR+C DCH+  K +SK
Sbjct: 664 VSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISK 723

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  R+I+VRD  RFH F  G+CSC DFW
Sbjct: 724 ITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 234/534 (43%), Gaps = 74/534 (13%)

Query: 106 YNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           YN+LI G+S  G    ++ LY   L    + P + T   ++   +  S    G  VH  +
Sbjct: 113 YNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQV 172

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS------------------------ 200
           +++GF    FV + L++ Y + G I D RRVF EM                         
Sbjct: 173 LRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAK 232

Query: 201 -------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
                  +R+ ++WT+++    +  L  EA+ +F  M  EG+  +  T   +++AC  L 
Sbjct: 233 GLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALA 292

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
             E G ++ AYI     + N  + +ALVDMY KC ++  A+ +F     RN++    ++ 
Sbjct: 293 ASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIV 352

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y +   + EA+    EM + G +PD  T+ S +S+ A L  L  G   H   L +GL  
Sbjct: 353 GYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMR 412

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
           + ++ N ++ +Y KCG  E A R+FD MS    VSW +L+ G  + G             
Sbjct: 413 YITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKA----------- 461

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                               +E ++LF  ML   +K D VT +GV SAC   G ++    
Sbjct: 462 --------------------KETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCD 501

Query: 494 IYAYIEKNG--IHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAM 550
            +  ++K+   +  D    T ++D+++R G  + A +  ++M    D   W   + +  +
Sbjct: 502 YFDSMQKDHDIVPIDDHY-TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560

Query: 551 EGN---GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            GN   G+ A E   E   Q   P S V +  + A    G   +  HL R M D
Sbjct: 561 RGNMEIGKWAAENLLETDPQ--NPASYVLLCSMHAAK--GQWTEVAHLRRGMRD 610



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 212/465 (45%), Gaps = 66/465 (14%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           HC +L+ G G      S +V   A+MG       A++ F         + T+ MYN+LI 
Sbjct: 169 HCQVLRLGFGAYAFVGSPLVDMYAKMGLIRD---ARRVFQ-----EMEAKTVVMYNTLIT 220

Query: 112 GY-------------------------------SCIGLGVEAISLYVELAGFGILPDKFT 140
           G                                +  GL +EA+ ++  +   G+  D++T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           F  +L AC   +A  EG Q+H  I +  ++ +VFV + L++ Y +C  I     VF  M+
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            RN++SWT++I    +    +EAV  F EM  +GIKP+  T+  VIS+CA L +LE G +
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
                   G+     + NALV +Y KCG+++ A +LF E    + V    +++ Y + G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI--- 377
           A+E + + ++ML++G +PD VT +  +SA ++ G           ++  G + +DS+   
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAG-----------LVEKGCDYFDSMQKD 509

Query: 378 ---------CNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDVES--- 424
                       MID+Y + G+ + A      M +      W +L++     G++E    
Sbjct: 510 HDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKW 569

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           A E   E   ++  S+  +      +  + E   L R M   ++K
Sbjct: 570 AAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVK 614



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 144/360 (40%), Gaps = 76/360 (21%)

Query: 363 HGYVLRNGLEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD 421
           H  +L+  L+   + + N ++  Y K G+   A R+FD M +  + + N+L++ L  +  
Sbjct: 35  HCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRL 94

Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVAS 480
           V     +F+ MP RD +S+N ++ G +       +++L+R +L E  ++  R+T+  +  
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME------ 534
               L    L   ++  + + G      + + LVDM+A+ G  + A +VF+ ME      
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214

Query: 535 -------------------------KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
                                     RD   WT  +  +   G   +A+++F  M  +G+
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274

Query: 570 KPDSIVFVGVLTACSHGGLVNQG----------WH------------------------- 594
             D   F  +LTAC       +G          W+                         
Sbjct: 275 GIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAAC 651
           +FR MT        I+ +  M+   G+     EA+     M    ++P+D   GS++++C
Sbjct: 335 VFRRMT-----CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC 389


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/611 (38%), Positives = 347/611 (56%), Gaps = 37/611 (6%)

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           +  +++T   +I  C     ++    V  ++   G +    ++N L++MY+K G +D A+
Sbjct: 12  LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEAR 71

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            LF E  DRN+V   T++S Y    L  +AL  L  ML  G RP+  T  S + A   L 
Sbjct: 72  NLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLL 131

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
           +L   R  HG +L+ GLE    + + +ID Y K G+Q                       
Sbjct: 132 NL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQH---------------------- 166

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                     A  VF+EM   D + WN+++GG  Q +  +E + L++ M       D+ T
Sbjct: 167 ---------DALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQST 217

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM- 533
           +  V  AC  L  L+L + ++ ++ K     D+ L  AL+DM+ +CG  + A  +F RM 
Sbjct: 218 LTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMM 275

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
            ++DV +W+  I  +A  G    A++LF  M  +G KP+ I  +GVL ACSH GLVN GW
Sbjct: 276 TEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGW 335

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
           + F+SM +  G+ P   HYGC++DLLGRAG L EA+ LI  M  EP+ V W  LL AC+ 
Sbjct: 336 YYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRV 395

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H+NVD+A YAA+ I +LDP  +G ++LLSNIYA++ KW +VA VR +M+ +G++K PG S
Sbjct: 396 HKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCS 455

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            IEV+ +VH F  GD SHP +  I   L ++  RL   GYVPD   VL D++ ++ +  L
Sbjct: 456 WIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSL 515

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
            +HSEKLA+ FGL+S      I + KNLR+C DCH FAKLVS++ +R I++RD  R+H F
Sbjct: 516 QYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHF 575

Query: 834 RQGSCSCSDFW 844
           R G CSC D+W
Sbjct: 576 RGGVCSCGDYW 586



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 208/437 (47%), Gaps = 47/437 (10%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D  T+  ++  C    A  +   VH  +   G++   F+ N LIN Y + G + + R +F
Sbjct: 15  DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF 74

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           DEM +RNVVSWT++I A +  +L  +A+     M+ EG++PN  T   V+ AC  L NL 
Sbjct: 75  DEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR 134

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
              ++   I ++G++++  + +AL+D Y K G    A  +F E    +LV+ N+I+  + 
Sbjct: 135 ---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFA 191

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           +     E L +   M       D+ T+ S + A   L  L  GR  H +VL+     +D 
Sbjct: 192 QNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK-----YDQ 246

Query: 377 ---ICNTMIDMYMKCGKQEMACRIFDH-MSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
              + N ++DMY KCG  E A  +F   M+ K V+SW+++IAGL +NG        FS  
Sbjct: 247 DLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNG--------FS-- 296

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                                 +A++LF  M S+  K + +T++GV  AC + G ++   
Sbjct: 297 ---------------------ADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVN-DG 334

Query: 493 WIY--AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAMA 549
           W Y  +  E  GI    +    ++D+  R G    A+++   M    D   W   +GA  
Sbjct: 335 WYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACR 394

Query: 550 MEGNGEQAVELFNEMLR 566
           +  N + A+    E+L+
Sbjct: 395 VHKNVDLAIYAAKEILK 411



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 221/464 (47%), Gaps = 40/464 (8%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H H+   G   K   I+ ++    + G  +    A+  FD     N  S T     ++I 
Sbjct: 39  HEHVFSNGYEPKTFLINTLINMYVKFGLLDE---ARNLFDEMPDRNVVSWT-----TMIS 90

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
            YS   L  +A+   + +   G+ P+ +T+  VL AC          Q+HG+I+K+G + 
Sbjct: 91  AYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC---DGLLNLRQLHGSILKVGLES 147

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           DVFV + LI+ Y + G+  D   VF+EM   ++V W S+I   A+     E ++L+  M 
Sbjct: 148 DVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMK 207

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
                 +  T+  V+ AC  L  LELG +V  ++  L    + ++ NAL+DMY KCG+++
Sbjct: 208 RADFVADQSTLTSVLRACTGLALLELGRQVHVHV--LKYDQDLILNNALLDMYCKCGSLE 265

Query: 292 TAKQLFGE-CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
            A  LF     +++++  +T+++   + G + +AL + + M   GP+P+ +T+L  + A 
Sbjct: 266 DANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFAC 325

Query: 351 AQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
           +  G +  G      M   + +  G E +  I    ID+  + GK + A ++   M+++ 
Sbjct: 326 SHAGLVNDGWYYFQSMKEHFGIDPGREHYGCI----IDLLGRAGKLDEAVKLIHEMNHEP 381

Query: 406 -VVSWNSLIAG--LIKNGD--VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
             V+W  L+    + KN D  + +A+E+    P  D  ++  +         +E+  E+ 
Sbjct: 382 DAVTWRILLGACRVHKNVDLAIYAAKEILKLDPA-DAGTYILLSNIYANSQKWEDVAEVR 440

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
           R M +  +K D          C +   ++++K ++A+I  +  H
Sbjct: 441 RKMRTRGVKKD--------PGCSW---IEVSKQVHAFILGDNSH 473



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 12/263 (4%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+ C  L  L+Q H  ILK GL       S V    A + T+  L     A + +  +  
Sbjct: 124 LRACDGLLNLRQLHGSILKVGLE------SDVFVRSALIDTYSKLGEQHDALNVF--NEM 175

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            +  L ++NS+I G++    G E + LY  +     + D+ T   VL ACT  +    G 
Sbjct: 176 ITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGR 235

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-SERNVVSWTSLICACARR 217
           QVH  ++K  +D+D+ + N L++ Y +CG + D   +F  M +E++V+SW+++I   A+ 
Sbjct: 236 QVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQN 293

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALM 276
               +A+ LF  M  +G KPN +T++ V+ AC+    +  G      + E  G+      
Sbjct: 294 GFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREH 353

Query: 277 VNALVDMYMKCGAVDTAKQLFGE 299
              ++D+  + G +D A +L  E
Sbjct: 354 YGCIIDLLGRAGKLDEAVKLIHE 376



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 5/215 (2%)

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           M+    M   R+  D +T   +   C   GA+  A+ ++ ++  NG      L   L++M
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           + + G    A  +F  M  R+V +WT  I A +      +A++    MLR+G++P+   +
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
             VL AC   GL+N    L  S+  + G+   +     ++D   + G   +AL++   M 
Sbjct: 121 SSVLRACD--GLLNLR-QLHGSILKV-GLESDVFVRSALIDTYSKLGEQHDALNVFNEM- 175

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           +  + V+W S++    ++ + D   +  +R+   D
Sbjct: 176 ITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRAD 210


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/692 (34%), Positives = 364/692 (52%), Gaps = 36/692 (5%)

Query: 157 GVQVHGAIVKMGFDRDV--FVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           G   H  I+K   D  +  F+ N L+N Y +       + +      R+VV+WT+LI   
Sbjct: 25  GRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            +      A++ F  M  + I+PN  T  C   A   L++  +G +V A   + G  ++ 
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            +  +  DMY K G  + A+++F E  +RN+   N  +SN V  G   +AL    E    
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHE 203

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G  P+ +T  + ++A A    L  GR  HG+VL++G E   S+ N +ID Y KC   ++ 
Sbjct: 204 GWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKC--HQVG 261

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
           C                             +  +FS +   + +SW +M+    Q +  E
Sbjct: 262 C-----------------------------SEIIFSGISKPNDVSWCSMIVSYVQNDEEE 292

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           +A  +F     E I+     +  V SAC  L  L++ K ++    K  +  ++ + +ALV
Sbjct: 293 KACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALV 352

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML--RQGIKPD 572
           DM+ +CG  + A + F  M +R++  W A IG  A +G  + AV LF+EM      + P+
Sbjct: 353 DMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPN 412

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + FV VL+ACS  G VN G  +F SM   +G+ P   HY C+VDLLGRAG++ +A   I
Sbjct: 413 YVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFI 472

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           K MP+ P   +WG+LL A +     ++   AA+ + ELDP  SG HVLLSN++A+AG+W 
Sbjct: 473 KKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWE 532

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
               VR +MK+ GI+K  G S I     VH F + D SH   + I +ML ++   +  AG
Sbjct: 533 EATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAG 592

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           Y+PD +  L D++E+EK   + +HSEK+A+AFGLIS    +PIR+ KNLR+C DCHS  K
Sbjct: 593 YIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIK 652

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            +S +  REIIVRDNN FH FR   CSC D+W
Sbjct: 653 FISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 206/457 (45%), Gaps = 33/457 (7%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           ++  + +LI G    G    A+  +  +    I P+ FTFP    A     +   G QVH
Sbjct: 72  SVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVH 131

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
              VK G   DVFV     + Y + G   + R++FDEM ERN+ +W + +          
Sbjct: 132 ALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYD 191

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           +A+  F E   EG +PN +T    ++ACA    L LG ++  ++ + G +A+  + N L+
Sbjct: 192 DALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLI 251

Query: 282 DMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           D Y KC  V  ++ +F G  K  ++  C+ I+S YV+     +A  +       G  P  
Sbjct: 252 DFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVS-YVQNDEEEKACLVFLRARKEGIEPTD 310

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
             + S +SA A L  L  G+  H   ++  + G   + + ++DMY KCG  E A R FD 
Sbjct: 311 FMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDE 370

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M  + +V+WN++I G    G  + A  +F EM    H                       
Sbjct: 371 MPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSH----------------------- 407

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFAR 519
                 R+  + VT V V SAC   G++++   I+  +  + GI    +    +VD+  R
Sbjct: 408 ------RVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGR 461

Query: 520 CGDPQRAMQVFRRMEKR-DVSAWTAAIGAMAMEGNGE 555
            G  ++A Q  ++M  R  VS W A +GA  M G  E
Sbjct: 462 AGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 498


>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
          Length = 695

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/670 (34%), Positives = 379/670 (56%), Gaps = 20/670 (2%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE--CGDIVDGRR 194
           D   F  +L  C  +  F    Q+H   +  G   +   +  L  F+     G +    +
Sbjct: 33  DYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYK 89

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F ++ E +VV W ++I   ++ D   E V L+  M++EG+ P+S T   +++   +   
Sbjct: 90  LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG 149

Query: 255 -LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            L  G ++  ++ + G+ +N  + NALV MY  CG +D A+ +F      ++   N ++S
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL-LCGRMCHGYVLRNGLE 372
            Y R+    E++ +L EM  +   P  VT+L  +SA +++ D  LC R+ H YV     E
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV-HEYVSECKTE 268

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + N +++ Y  CG+ ++A RIF  M  + V+SW S++ G ++ G+++ AR  F +M
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           P RD ISW  M+ G  +   F E++E+FR M S  +  D  TMV V +AC +LG+L++ +
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
           WI  YI+KN I  D+ +  AL+DM+ +CG  ++A +VF  M++RD   WTA +  +A  G
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G++A+++F +M    I+PD I ++GVL+AC+H G+V+Q    F  M   H + P +VHY
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GCMVD+LGRAGL+ EA ++++ MP+ PN ++WG+LL A + H +  +A  AA++I EL+P
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEP 568

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           +   V+ LL NIYA   +W ++  VR ++ +  I+K PG S IEVNG  HEF +GD+SH 
Sbjct: 569 DNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHL 628

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
           +   I   L E+      A Y+PD + +L +   +E    L  HS+        ++T +T
Sbjct: 629 QSEEIYMKLEELAQESTFAAYLPDTSELLFEAGNKE----LEEHSQ--------VTTLRT 676

Query: 793 MPIRVVKNLR 802
            PI  +   R
Sbjct: 677 NPIESINWFR 686



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 167/573 (29%), Positives = 276/573 (48%), Gaps = 75/573 (13%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV-VCTCAQMGTFESLTYAQKAFDYYI 94
           I  L  CKT ++ KQ H   + +G+   P++  K+ V  C+++G    ++YA K F   +
Sbjct: 38  ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGG--HVSYAYKLF---V 92

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS-SA 153
           K  E    +  +N++I+G+S +    E + LY+ +   G+ PD  TFPF+LN   +   A
Sbjct: 93  KIPEPDVVV--WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGA 150

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G ++H  +VK G   +++V+N L+  Y  CG +   R VFD   + +V SW  +I  
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISG 210

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             R    +E++ L  EM    + P SVT++ V+SAC+K+++ +L  RV  Y+ E   + +
Sbjct: 211 YNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPS 270

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG---LAR-------- 322
             + NALV+ Y  CG +D A ++F   K R+++   +I+  YV  G   LAR        
Sbjct: 271 LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330

Query: 323 --------------------EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
                               E+L I  EM   G  PD  TM+S ++A A LG L  G   
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
             Y+ +N ++    + N +IDMY KCG  E A ++F  M  +   +W +++ GL  NG  
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           + A +VF +M                 ++M               I+ D +T +GV SAC
Sbjct: 451 QEAIKVFFQM-----------------QDM--------------SIQPDDITYLGVLSAC 479

Query: 483 GYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-A 540
            + G +D A+  +A +  +  I   +     +VDM  R G  + A ++ R+M     S  
Sbjct: 480 NHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIV 539

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           W A +GA  +  N E   EL  + + + ++PD+
Sbjct: 540 WGALLGASRLH-NDEPMAELAAKKILE-LEPDN 570


>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/580 (39%), Positives = 336/580 (57%), Gaps = 35/580 (6%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G   +  MV  L+    KC A+D A ++F    + N+ L   ++  +V  G   +A+ + 
Sbjct: 59  GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLY 118

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             ML     PD   M S + A      L  GR  H   L+ GL     +   ++++Y KC
Sbjct: 119 SRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKC 178

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP----GRDHISWNTML 444
           G                               ++  AR VF EMP     +D + W  M+
Sbjct: 179 G-------------------------------ELGDARRVFEEMPEDVVAKDTVCWTAMI 207

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
            G  +      A+E FR M  E ++ +  T+V V SAC  LGAL++ +W+++Y+ K  I 
Sbjct: 208 DGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIE 267

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            ++ +  AL++M++RCG    A  VF  M+ RDV  +   I  ++M G   QA+ELF  M
Sbjct: 268 LNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVM 327

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
           + + ++P ++ FVGVL ACSHGGLV+ G+ +F SMT  +GV PQI HYGCMVDLLGR G 
Sbjct: 328 IGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGR 387

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA DLI++M + P+ ++ G+LL+AC+ H+N+++    A+ + +     SG +VLLS++
Sbjct: 388 LEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHV 447

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YAS+GKW   A+VR +MKE G++K PG SSIEVN ++HEF  GD  HP    I   L E+
Sbjct: 448 YASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEEL 507

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
           N  LR  GY P+   VL D+++ EK++ L+ HSE+LA+ +GLIST     IRV+KNLR+C
Sbjct: 508 NRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVC 567

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCHS  KL++K+  R+++VRD NRFH+F  G+CSC D+W
Sbjct: 568 YDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 607



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 202/392 (51%), Gaps = 14/392 (3%)

Query: 9   PLVLATPTVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHCHILKQGLGHKPSYI 67
           P    +P     +N +       D   I SL +  K +N++   H  +++ G    P  +
Sbjct: 8   PFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMV 67

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
            +++ +C++     ++ YA + F Y    N     +++Y +LI G+   G   +AI LY 
Sbjct: 68  FELLRSCSKC---HAIDYASRIFQYTHNPN-----VYLYTALIDGFVSSGNYFDAIQLYS 119

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +    ILPD +    +L AC    A  EG +VH   +K+G   +  V   ++  YG+CG
Sbjct: 120 RMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCG 179

Query: 188 DIVDGRRVFDEMSE----RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
           ++ D RRVF+EM E    ++ V WT++I    R +    A+  F  M  E ++PN  T+V
Sbjct: 180 ELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIV 239

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
           CV+SAC++L  LE+G  V +Y+ +  ++ N  + NAL++MY +CG++D A+ +F E KDR
Sbjct: 240 CVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR 299

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMC 362
           +++  NT++S     G +R+A+ +   M+    RP  VT +  ++A +  G +  G ++ 
Sbjct: 300 DVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIF 359

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           H      G+E        M+D+  + G+ E A
Sbjct: 360 HSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEA 391



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 186/396 (46%), Gaps = 36/396 (9%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +++   +S    + + +H  +++ G  +D F+   L+    +C  I    R+F      N
Sbjct: 35  IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 94

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V  +T+LI          +A+ L+  M+ + I P++  M  ++ AC     L  G  V +
Sbjct: 95  VYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHS 154

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD----RNLVLCNTIMSNYVRLG 319
              +LG+ +N L+   ++++Y KCG +  A+++F E  +    ++ V    ++  +VR  
Sbjct: 155 RALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNE 214

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
               AL     M     RP+  T++  +SA +QLG L  GR  H Y+ +  +E    + N
Sbjct: 215 EMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGN 274

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            +I+MY +CG  + A  +FD M ++ V+++N++I+GL  NG    A              
Sbjct: 275 ALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQA-------------- 320

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                            +ELFRVM+  R++   VT VGV +AC + G +D    I+  + 
Sbjct: 321 -----------------IELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMT 363

Query: 500 KN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           ++ G+   ++    +VD+  R G  + A  + R M+
Sbjct: 364 RDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK 399



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 4/173 (2%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+A + +NG   D  +   L+   ++C     A ++F+     +V  +TA I      GN
Sbjct: 51  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
              A++L++ ML   I PD+ +   +L AC     + +G  +      +   S ++V   
Sbjct: 111 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 170

Query: 614 CMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYA 663
            M +L G+ G LG+A  + + MP   V  + V W +++    +++ ++ A  A
Sbjct: 171 IM-ELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEA 222


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/623 (36%), Positives = 350/623 (56%), Gaps = 33/623 (5%)

Query: 223 AVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           AV    ++++ G + P        I+ACA+ +NLE   +V A++       +A + N+L+
Sbjct: 34  AVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLI 93

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            +Y KCG+V  A+++F E + +++V   ++++ Y +  +  EA+ +L  ML    +P+  
Sbjct: 94  HLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGF 153

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T  S + A+    D   GR  H   ++        + + ++DMY +CG  +MA  +FD +
Sbjct: 154 TFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKL 213

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
            +K              NG                 +SWN ++ G  ++   E A+  F 
Sbjct: 214 DSK--------------NG-----------------VSWNALISGFARKGDGETALMTFA 242

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            ML    +    T   V S+   LGAL+  KW++A++ K+           L+DM+A+ G
Sbjct: 243 EMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSG 302

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
               A +VF R++ +D+  W   + A A  G G++AV  F EM + GI  + + F+ +LT
Sbjct: 303 SMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILT 362

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSHGGLV +G   F  M + + + P+I H+  +V LLGRAGLL  AL  I  MP+EP  
Sbjct: 363 ACSHGGLVKEGKRYFEMMKE-YDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTA 421

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            +WG+LLAAC+ H+N  +  +AA+ + ELDP+ SG  VLL NIYAS G+W   ARVR  M
Sbjct: 422 AVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIM 481

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           K  G++K P  S +E+   VH F + D++HP    I  M  +++ ++R  GYVPD+  VL
Sbjct: 482 KTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVL 541

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
           L VD+QE++  L +HSEKLA+AF LI       IR++KN+R+C DCHS  K +SKV+ RE
Sbjct: 542 LRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGRE 601

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+VRD NRFH F  GSCSC+D+W
Sbjct: 602 IVVRDTNRFHHFSNGSCSCADYW 624



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 199/423 (47%), Gaps = 32/423 (7%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P    +   + AC +S    +  +VH  +    F  D F++N LI+ Y +CG +++ R
Sbjct: 47  LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           +VFDEM  +++VSWTSLI   A+ D+P+EA+ L   M++   KPN  T   ++ A     
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
           +  +G ++ A   +     +  + +AL+DMY +CG +D A  +F +   +N V  N ++S
Sbjct: 167 DSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALIS 226

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            + R G    AL    EML +G      T  S  S+ A+LG L  G+  H +++++  + 
Sbjct: 227 GFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKM 286

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
                NT++DMY K G    A ++FD + +K +V+WN                       
Sbjct: 287 TAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWN----------------------- 323

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                   TML    Q  + +EA+  F  M    I +++VT + + +AC + G +   K 
Sbjct: 324 --------TMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKR 375

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEG 552
            +  +++  +  ++     +V +  R G    A+    +M     +A W A + A  M  
Sbjct: 376 YFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHK 435

Query: 553 NGE 555
           N +
Sbjct: 436 NAK 438



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 199/437 (45%), Gaps = 20/437 (4%)

Query: 6   NPSPLVLATPTVTTLTNQHKAKTTPKDSPS-IGSLKNCKTLNELKQPHCHILKQ---GLG 61
           NP P   A      L +  +   TP+   + I +    K L + ++ H H+      G  
Sbjct: 27  NPVPAASAVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDA 86

Query: 62  HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
              + +  + C C       S+  A+K FD   + +  S     + SLI GY+   +  E
Sbjct: 87  FLDNSLIHLYCKCG------SVLEARKVFDEMRRKDMVS-----WTSLIAGYAQNDMPEE 135

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           AI L   +      P+ FTF  +L A    +  G G Q+H   VK  +  DV+V + L++
Sbjct: 136 AIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLD 195

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            Y  CG +     VFD++  +N VSW +LI   AR+   + A+  F EM+  G +    T
Sbjct: 196 MYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFT 255

Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK 301
              V S+ A+L  LE G  V A++ +   K  A   N L+DMY K G++  A+++F    
Sbjct: 256 YSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVD 315

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRM 361
           D++LV  NT+++ + + GL +EA++  +EM   G   ++VT L  ++A +  G +  G+ 
Sbjct: 316 DKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKR 375

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA-CRIFDHMSNKTVVSWNSLIAG--LIK 418
               +    LE       T++ +  + G    A   IF      T   W +L+A   + K
Sbjct: 376 YFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHK 435

Query: 419 NGDVE--SAREVFSEMP 433
           N  V   +A  VF   P
Sbjct: 436 NAKVGQFAADHVFELDP 452


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 335/570 (58%), Gaps = 38/570 (6%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY---VRLGLAREALAILDEMLLH 334
           N L++MY+K   +  A +LF E  +RN +   T++  Y   VR   A E    L   +L 
Sbjct: 77  NILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVL- 135

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
              P++ T  S + A A +  L  G   H +V++ GL     + N ++D+Y KCG+    
Sbjct: 136 ---PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR---- 188

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                                      +E++ E+F+E P R+ ++WNT++ G  Q    E
Sbjct: 189 ---------------------------MENSMELFAESPHRNDVTWNTVIVGHVQLGDGE 221

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           +A+ LF  ML  R++   VT      AC  L AL+    I++   K     D+ +  AL+
Sbjct: 222 KALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALI 281

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+A+CG  + A  VF  M K+D  +W A I   +M G G +A+ +F++M    +KPD +
Sbjct: 282 DMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKL 341

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            FVGVL+AC++ GL++QG   F SM   HG+ P I HY CMV LLGR G L +A+ LI  
Sbjct: 342 TFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDE 401

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           +P +P+ ++W +LL AC  H ++++   +A+R+ E++P+    HVLLSN+YA+A +W NV
Sbjct: 402 IPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNV 461

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           A VR  MK +G++K PG S IE  G VH FT GD SHPE+  I+ ML  ++ + + AGY+
Sbjct: 462 ASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYI 521

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           P+   VLLDV+++EK+ LL  HSE+LA++FG+I T    PIR++KNLR+C DCH+  K +
Sbjct: 522 PNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCI 581

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SKV  REI+VRD NRFH F++G CSC D+W
Sbjct: 582 SKVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 222/454 (48%), Gaps = 38/454 (8%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT---FPFVLNACTKSSAFGEGVQVHGA 163
           N+ +  +S  G  V++  L  E  G  + P +F    +   L  C +      G  +H  
Sbjct: 5   NNFLIQFSRRGFSVQSAKLTQEFVGH-VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           I+K G   D+F  N L+N Y +   + D  ++FDEM ERN +S+ +LI   A      EA
Sbjct: 64  ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEA 123

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + LF  +  E + PN  T   V+ ACA ++ L LG+++  ++ ++G+ ++  + NAL+D+
Sbjct: 124 IELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDV 182

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG ++ + +LF E   RN V  NT++  +V+LG   +AL +   ML +  +   VT 
Sbjct: 183 YAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTY 242

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            SA+ A A L  L  G   H   ++   +    + N +IDMY KCG  + A  +FD M+ 
Sbjct: 243 SSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNK 302

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           +  VSWN++I+G   +G                       LG         EA+ +F  M
Sbjct: 303 QDEVSWNAMISGYSMHG-----------------------LG--------REALRIFDKM 331

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCDMQLATALVDMFARCGD 522
               +K D++T VGV SAC   G LD  + +  + I+ +GI   ++  T +V +  R G 
Sbjct: 332 QETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGH 391

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
             +A+++   +  +  V  W A +GA  +  + E
Sbjct: 392 LDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIE 425



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 197/398 (49%), Gaps = 22/398 (5%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
           KD PS G           K  HC ILK+G G    +   ++        F  L  A K F
Sbjct: 51  KDEPSRG-----------KGLHCEILKRG-GCLDLFAWNILLNMYVKSDF--LCDASKLF 96

Query: 91  DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
           D   + N  S     + +LI+GY+     +EAI L+V L    +LP++FTF  VL AC  
Sbjct: 97  DEMPERNTIS-----FVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQFTFASVLQACAT 150

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
                 G Q+H  ++K+G   DVFV N L++ Y +CG + +   +F E   RN V+W ++
Sbjct: 151 MEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTV 210

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I    +    ++A+ LF  M+E  ++   VT    + ACA L  LE G ++ +   +   
Sbjct: 211 IVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTF 270

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             + ++ NAL+DMY KCG++  A+ +F     ++ V  N ++S Y   GL REAL I D+
Sbjct: 271 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDK 330

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCG 389
           M     +PD++T +  +SA A  G L  G+     ++++ G+E        M+ +  + G
Sbjct: 331 MQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGG 390

Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAR 426
             + A ++ D +    +V+ W +L+   + + D+E  R
Sbjct: 391 HLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGR 428


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/571 (39%), Positives = 338/571 (59%), Gaps = 34/571 (5%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           +AL+ MY  C     A++ F E  D N V+   + S YVR  L   +L +   M+     
Sbjct: 133 SALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSA 192

Query: 338 P--DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
              D    L A SASA++ D       H  + + G E    + NTM+D Y K G +    
Sbjct: 193 SVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSR---- 248

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                    D+E AR+VF  M  RD +SWN+M+    Q  M  E
Sbjct: 249 -------------------------DLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAE 282

Query: 456 AMELFRVMLS--ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           A+ L+  ML+    IK + V +  V  AC + GA+   K I+  + + G+  ++ + T++
Sbjct: 283 AIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSI 342

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VDM+++CG  + A + FR+++++++ +W+A I    M G G++A+E+F EM R G++P+ 
Sbjct: 343 VDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNY 402

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I F+ VL ACSH GL+++G + + +M    G+   + HYGCMVDLLGRAG L EA  LIK
Sbjct: 403 ITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIK 462

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
            M V+P+  IWG+LL+AC+ H+NV++A  + +R+ ELD   SG +VLLSNIYA A  W +
Sbjct: 463 EMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKD 522

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           V R+RL +K + I K PG SS E+ GK++ F  GD+SHP+   I S L ++  R+++AGY
Sbjct: 523 VERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGY 582

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VP+  +VL D+DE+EK+  L  HSEKLA+AF L+++     I ++KNLR+C DCH+  K 
Sbjct: 583 VPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKF 642

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++K+ +REII+RD  RFH F+ G CSC D+W
Sbjct: 643 ITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 174/339 (51%), Gaps = 25/339 (7%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           Y+++N    +L ++ ++I   S   +  EA +L V  +    +PD+              
Sbjct: 170 YVRNNLVYHSLELFRAMIASDSA-SVVDEAAAL-VAFSASARVPDR-------------- 213

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG--DIVDGRRVFDEMSERNVVSWTSL 210
             G    +H  I K+GF+R+  V N +++ Y + G  D+   R+VFD M ER+VVSW S+
Sbjct: 214 --GVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSM 270

Query: 211 ICACARRDLPKEAVYLFFEM--VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           I   A+  +  EA+ L+ +M  V  GIK N+V +  V+ ACA    ++ G R+   +  +
Sbjct: 271 IALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRM 330

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G++ N  +  ++VDMY KCG V+ A + F + K++N++  + +++ Y   G  +EAL I 
Sbjct: 331 GLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIF 390

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMK 387
            EM   G RP+ +T +S ++A +  G L  GR  +  + +  G+E        M+D+  +
Sbjct: 391 TEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGR 450

Query: 388 CGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESA 425
            G  + A  +   M  K   + W +L++    + +VE A
Sbjct: 451 AGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELA 489



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H  I K G       ++ ++ + A+ G+   L  A+K FD   +D      +  +NS+I 
Sbjct: 220 HALIAKIGFERNAGVVNTMLDSYAKGGS-RDLEVARKVFDTMERD------VVSWNSMIA 272

Query: 112 GYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
            Y+  G+  EAI LY ++   G GI  +      VL AC  + A   G ++H  +V+MG 
Sbjct: 273 LYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGL 332

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           + +V+V   +++ Y +CG +    R F ++ E+N++SW+++I         +EA+ +F E
Sbjct: 333 EENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTE 392

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDR-VCAYIDELGMKANALMVNALVDMYMKCG 288
           M   G++PN +T + V++AC+    L+ G     A   E G++A       +VD+  + G
Sbjct: 393 MKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAG 452

Query: 289 AVDTAKQLFGECK 301
            +D A  L  E K
Sbjct: 453 CLDEAYSLIKEMK 465


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/616 (36%), Positives = 348/616 (56%), Gaps = 37/616 (6%)

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
            DE+  + N    NA++ +Y K G V+  + +F     R+ V  NT++S +   G    A
Sbjct: 81  FDEMTQRDN-FSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPA 139

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +   M   G +P   T +S ++A  QL DL  G+  HG ++   L G   +CN + D+
Sbjct: 140 LGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDL 199

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN------------------------- 419
           Y +CG+ + A R+FD M  + VV+WN +I+G +KN                         
Sbjct: 200 YARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTA 259

Query: 420 ----------GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                     G ++ AR+VF E+  +D + W  M+ G  Q    E+A+ LF  ML E  +
Sbjct: 260 SSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENAR 319

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            D  T+  V S+C  L +L   + ++      G++ D+ +++ALVDM+ +CG  + A  +
Sbjct: 320 PDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTI 379

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M+ R+V +W + IG  A+ G   +A+ L+  ML + +KPDS+ FVGVL+AC H GLV
Sbjct: 380 FSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLV 439

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +G   F SM+D HG+ P   HY CMV+L GR+G + +A+DLI SM  EPN +IW ++L+
Sbjct: 440 EEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLS 499

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
            C    ++     AA  + EL+P  +  +++LSN+YA+ G+W +VA +R  MK + ++K 
Sbjct: 500 VCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKF 559

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
              S IE++ +VH+F + D +HP+   I   L  +  +L++AG+ P+   VL D  E EK
Sbjct: 560 SAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEK 619

Query: 770 KYLLSHHSEKLAMAFGLISTSK-TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
              +++HSEKLA+A+GLI       PIR++KN+R C DCH F K VS +  R +I+RD+N
Sbjct: 620 LESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSN 679

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F +G CSC D+W
Sbjct: 680 RFHHFVEGKCSCKDYW 695



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 220/476 (46%), Gaps = 71/476 (14%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           I DN  S     YN++I G++  G G  A+ +++ +   G+ P ++T   VLNACT+   
Sbjct: 111 IFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLD 170

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G Q+HG I+      +VFV N L + Y  CG+I   RR+FD M  RNVV+W  +I  
Sbjct: 171 LRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISG 230

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             +   P++ + LF EM    +KP+ VT   V+ A                         
Sbjct: 231 YLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------------------------- 265

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
                     Y++ G +D A+++FGE ++++ V    ++    + G   +AL +  EMLL
Sbjct: 266 ----------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLL 315

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
              RPD  T+ S VS+ A+L  L  G++ HG     G+     + + ++DMY KCG    
Sbjct: 316 ENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRD 375

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A  IF  M  + VVSWNS+I G   NG                             +++ 
Sbjct: 376 AWTIFSTMQTRNVVSWNSMIGGYALNG-----------------------------QDL- 405

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATA 512
            EA+ L+  ML E +K D VT VGV SAC + G ++  K  +  + +++G+         
Sbjct: 406 -EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYAC 464

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMAMEGN---GEQAVELFNEM 564
           +V++F R G   +A+ +   M +   S  WT  +    M+G+   GE A     E+
Sbjct: 465 MVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIEL 520



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 8/280 (2%)

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           I N ++++Y K G+   A ++FD M+ +   SWN++++   K+G VE  R +F  MP RD
Sbjct: 60  IHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRD 119

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            +S+NT++ G         A+ +F  M  E +K    T V V +AC  L  L   K I+ 
Sbjct: 120 SVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHG 179

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            I    +  ++ +  AL D++ARCG+  +A ++F RM  R+V  W   I         E+
Sbjct: 180 RIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEK 239

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
            ++LF+EM    +KPD +    VL A    G +++   +F  + +   V   I+  GC  
Sbjct: 240 CIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGC-- 297

Query: 617 DLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQK 653
               + G   +AL L   M +E   P+     S++++C K
Sbjct: 298 ---AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAK 334


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 255/786 (32%), Positives = 411/786 (52%), Gaps = 36/786 (4%)

Query: 58   QGLGH--KPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSC 115
            Q LGH  +  +   V    + +  F S +  ++A   Y+ D+     +  +N++I  Y+ 
Sbjct: 318  QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC--YVFDHMNECDIISWNAMISAYAH 375

Query: 116  IGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFV 175
             GL  E++  +  +       +  T   +L+ C+       G  +HG +VK+G D +V +
Sbjct: 376  HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCI 435

Query: 176  ENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI 235
             N L+  Y E G   D   VF  M+ER+++SW S++    +     + + +  E+++ G 
Sbjct: 436  CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 495

Query: 236  KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
              N VT    ++AC+  + L     V A I   G     ++ NALV MY K G +  AK+
Sbjct: 496  VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 555

Query: 296  LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
            +       + V  N ++  +       EA+     +   G   + +TM+S + A +   D
Sbjct: 556  VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDD 615

Query: 356  LL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
            LL  G   H +++  G E  D + N++I MY KCG                         
Sbjct: 616  LLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCG------------------------- 650

Query: 415  GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                  D+ S+  +F  +  +  I+WN M+         EEA+++F  M +  + +D+ +
Sbjct: 651  ------DLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFS 704

Query: 475  MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
              G  +A   L  L+  + ++  + K G   D+ +  A +DM+ +CG+    +++  +  
Sbjct: 705  FSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI 764

Query: 535  KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
             R   +W   I A A  G  ++A E F+EML+ G KPD + FV +L+AC+HGGLV++G  
Sbjct: 765  NRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA 824

Query: 595  LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             + SMT   GV P I H  C++DLLGR+G L  A   IK MPV PND+ W SLLAAC+ H
Sbjct: 825  YYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIH 884

Query: 655  QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSS 714
             N+++A   AE + ELDP     +VL SN+ A++GKW +V  +R +M    I+K P  S 
Sbjct: 885  GNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSW 944

Query: 715  IEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS 774
            +++  KVH F  G++ HP+ + IS+ L E+    ++AGYVPD +  L D+DE++K+Y L 
Sbjct: 945  VKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLW 1004

Query: 775  HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
            +HSE+LA+AFGLI+T ++  +R+ KNLR+C DCHS  K VS +  R+I++RD  RFH F 
Sbjct: 1005 NHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFS 1064

Query: 835  QGSCSC 840
             G CSC
Sbjct: 1065 GGKCSC 1070



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 255/506 (50%), Gaps = 37/506 (7%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F ++ +A+  FD     NE S     +++++ GY  +GL  EA+ L+ ++ G G+ P+ F
Sbjct: 142 FGNIEHARYVFDEMRHRNEAS-----WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGF 196

Query: 140 TFPFVLNACTKSSAFG-EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
               ++ AC++S     EG QVHG +VK G   DV+V   L++FYG  G + + +++F+E
Sbjct: 197 MVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEE 256

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M + NVVSWTSL+   +    P E + ++  M +EG+  N  T   V S+C  L++  LG
Sbjct: 257 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 316

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
            +V  +I + G + +  + N+L+ M+    +V+ A  +F    + +++  N ++S Y   
Sbjct: 317 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 376

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           GL RE+L     M       +  T+ S +S  + + +L  GR  HG V++ GL+    IC
Sbjct: 377 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 436

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           NT++ +Y + G+ E A  +F  M+ + ++SWNS++A  +++G      ++ +E+      
Sbjct: 437 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL------ 490

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                             +++ +VM       + VT     +AC     L  +K ++A I
Sbjct: 491 ------------------LQMGKVM-------NHVTFASALAACSNPECLIESKIVHALI 525

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
              G H  + +  ALV M+ + G    A +V + M + D   W A IG  A      +AV
Sbjct: 526 IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAV 585

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACS 584
           + +  +  +GI  + I  V VL ACS
Sbjct: 586 KAYKLIREKGIPANYITMVSVLGACS 611



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 269/582 (46%), Gaps = 41/582 (7%)

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI-LPDKFTFPFVLNAC 148
           F   +KD++   +    N+  R + C+   +  + L  +   +GI   +   FP  L   
Sbjct: 51  FAEQVKDDDLKTS----NAGSRRWGCLDGDIAKVFLQQQHTDYGIRCLNAVNFP--LKGF 104

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
           ++ ++   G  +H   +    +  +F  N LIN Y + G+I   R VFDEM  RN  SW+
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL-ELGDRVCAYIDE 267
           +++    R  L +EAV LF +M   G++PN   +  +I+AC++   + + G +V  ++ +
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 224

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
            G+  +  +  ALV  Y   G V  A++LF E  D N+V   ++M  Y   G   E L +
Sbjct: 225 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 284

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
              M   G   ++ T  +  S+   L D + G    G++++ G E   S+ N++I M+  
Sbjct: 285 YQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 344

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
               E AC +FDHM+   ++SWN++I+    +G                           
Sbjct: 345 FSSVEEACYVFDHMNECDIISWNAMISAYAHHG--------------------------- 377

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
               +  E++  F  M     + +  T+  + S C  +  L   + I+  + K G+  ++
Sbjct: 378 ----LCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNV 433

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            +   L+ +++  G  + A  VF+ M +RD+ +W + +     +G     +++  E+L+ 
Sbjct: 434 CICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQM 493

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G   + + F   L ACS+   + +   +  ++  + G    ++    +V + G+ G++ E
Sbjct: 494 GKVMNHVTFASALAACSNPECLIES-KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMME 552

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE 669
           A  ++++MP +P+ V W +L+    +++  + A  A + I E
Sbjct: 553 AKKVLQTMP-QPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 593


>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/598 (37%), Positives = 346/598 (57%), Gaps = 3/598 (0%)

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           A  Q+  L  ++ A I + G+  +  + N L++ Y KCG +  A QLF     R+ V   
Sbjct: 14  AARQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWA 73

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC--GRMCHGYVL 367
           ++++          AL+I   +L  G  PD     S V A A LG L    G+  H    
Sbjct: 74  SLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFF 133

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            +     D + +++IDMY K G  +    +FD +S+   +SW ++I+G  ++G    A  
Sbjct: 134 LSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFR 193

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-DRVTMVGVASACGYLG 486
           +F + P R+  +W  ++ GL Q     +A  LF  M  E I V D + +  V  AC  L 
Sbjct: 194 LFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLA 253

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
             +L K ++  +   G    + ++ AL+DM+A+C D   A  +F  M ++DV +WT+ I 
Sbjct: 254 LWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIV 313

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
             A  G  E+A+ L++EM+  G+KP+ + FVG++ ACSH GLV++G  LFR+M + HG+S
Sbjct: 314 GTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGIS 373

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           P + HY C++DL  R+G L EA +LI++MPV P++  W +LL++C++H N  +A   A+ 
Sbjct: 374 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADH 433

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
           +  L PE    ++LLSNIYA AG W +V++VR  M     +K PG S I++    H F +
Sbjct: 434 LLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYA 493

Query: 727 GDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGL 786
           G+ SHP  + I  ++RE++  +R  GY PD ++VL D+D+QEK+  L  HSE+LA+A+GL
Sbjct: 494 GETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGL 553

Query: 787 ISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +       IR+VKNLR+C DCH+  KL+S + +REI VRD  R+H F+ G+CSC+DFW
Sbjct: 554 LKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 201/460 (43%), Gaps = 47/460 (10%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           K+ H  I+K GL       + ++    + G  +    A + FD   + +  +     + S
Sbjct: 23  KKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQD---ALQLFDALPRRDPVA-----WAS 74

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF--GEGVQVHGAIVK 166
           L+   +       A+S+   L   G  PD F F  ++ AC         +G QVH     
Sbjct: 75  LLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFL 134

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR---------- 216
             F  D  V++ LI+ Y + G    GR VFD +S  N +SWT++I   AR          
Sbjct: 135 SPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRL 194

Query: 217 -RDLPK--------------------EAVYLFFEMVEEGIK-PNSVTMVCVISACAKLQN 254
            R  P                     +A +LF EM  EGI   + + +  V+ ACA L  
Sbjct: 195 FRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLAL 254

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
            ELG ++   +  LG ++   + NAL+DMY KC  +  AK +F E   +++V   +I+  
Sbjct: 255 WELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVG 314

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-MCHGYVLRNGLEG 373
             + G A EALA+ DEM+L G +P+ VT +  + A +  G +  GR +    V  +G+  
Sbjct: 315 TAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISP 374

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREV---F 429
                  ++D++ + G  + A  +   M  N    +W +L++   ++G+ + A  +    
Sbjct: 375 SLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHL 434

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
             +   D  S+  +        M+E+  ++ ++M++   K
Sbjct: 435 LNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAK 474



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 143/358 (39%), Gaps = 78/358 (21%)

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           ++ S + ++A+   LL  ++ H  +++ GL   + I NT+++ Y KCG  + A ++FD +
Sbjct: 6   SLQSQLCSAARQSPLLAKKL-HAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDAL 64

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             +  V+W SL+                  +  R H                  A+ + R
Sbjct: 65  PRRDPVAWASLLTA--------------CNLSNRPH-----------------RALSISR 93

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDL--AKWIYAYIEKNGIHCDMQLATALVDMFAR 519
            +LS     D      +  AC  LG L +   K ++A    +    D  + ++L+DM+A+
Sbjct: 94  SLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAK 153

Query: 520 CGDPQ-------------------------------RAMQVFRRMEKRDVSAWTAAIGAM 548
            G P                                 A ++FR+   R++ AWTA I  +
Sbjct: 154 FGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGL 213

Query: 549 AMEGNGEQAVELFNEMLRQGIK-PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
              GNG  A  LF EM  +GI   D +V   V+ AC++  L    W L + M   HGV  
Sbjct: 214 VQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLAL----WELGKQM---HGVVI 266

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPV-----EPNDVIWGSLLAACQKHQNVDIA 660
            + +  C+        +  +  DL+ +  +       + V W S++    +H   + A
Sbjct: 267 TLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEA 324


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/558 (39%), Positives = 332/558 (59%), Gaps = 10/558 (1%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G +  A+QLF    + ++   N +++ Y+       A    D+M    P  D  +  + +
Sbjct: 51  GKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQM----PVKDTASWNTMI 106

Query: 348 SASAQLGDLLCGRMCHGYV-LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           S  +Q G +   R     + +RN +  W    N MI  Y++ G  ++A ++F+    ++V
Sbjct: 107 SGFSQNGMMDQARELFLVMPVRNSV-SW----NAMISGYVESGDLDLAKQLFEVAPVRSV 161

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+W ++I G +K G +E A + F EMP ++ ++WN M+ G  +    E  ++LF+ M+  
Sbjct: 162 VAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVES 221

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
             + +  ++  V   C  L AL L K ++  I K+ +  ++   T+L+ M+ +CGD + A
Sbjct: 222 GFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDA 281

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            ++F  M ++DV  W A I   A  G GE+A+ LF++M  +G+KPD I FV VL+AC+H 
Sbjct: 282 WKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHA 341

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           G V+ G   F SM   +GV  +  HY C+VDLLGR G L EA+DLIK MP +P+  I+G+
Sbjct: 342 GFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGT 401

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+ H+N+++A +AA+ +  LDPE +  +V L+N+YA+  +W +VA VR  MK+  +
Sbjct: 402 LLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKV 461

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            K PG S IEV   VHEF SGD  HPE+  I   L E+  ++R AGYVPDL   L DV E
Sbjct: 462 IKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGE 521

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           ++KK +L  HSEKLA+A+GLI      PIRV KNLR+C DCHS  K +S +  R IIVRD
Sbjct: 522 EQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRD 581

Query: 827 NNRFHFFRQGSCSCSDFW 844
             RFH FRQG CSC D+W
Sbjct: 582 TTRFHHFRQGECSCGDYW 599



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 183/401 (45%), Gaps = 47/401 (11%)

Query: 164 IVKMGFDR----DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           + +  FDR    D+F  N ++  Y    D+   R  FD+M  ++  SW ++I   ++  +
Sbjct: 55  VARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGM 114

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             +A  LF  M       NSV+   +IS   +  +L+L  ++     E+    + +   A
Sbjct: 115 MDQARELFLVMPVR----NSVSWNAMISGYVESGDLDLAKQLF----EVAPVRSVVAWTA 166

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           ++  +MK G ++ A++ F E   +NLV  N +++ Y+    A   L +   M+  G RP+
Sbjct: 167 MITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPN 226

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIF 398
             ++ S +   + L  L  G+  H  + ++ +  W+    T ++ MY KCG  E A ++F
Sbjct: 227 PSSLSSVLLGCSNLSALKLGKQVHQLICKSPV-SWNITAGTSLLSMYCKCGDLEDAWKLF 285

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             M  K VV+WN++I+G  ++G                         G       E+A+ 
Sbjct: 286 LVMPQKDVVTWNAMISGYAQHG------------------------AG-------EKALY 314

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMF 517
           LF  M  E +K D +T V V SAC + G +DL  ++  + +   G+       T +VD+ 
Sbjct: 315 LFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLL 374

Query: 518 ARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGNGEQA 557
            R G    A+ + ++M  +  SA +   +GA  +  N E A
Sbjct: 375 GRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELA 415



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 143/325 (44%), Gaps = 46/325 (14%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG----------------------- 415
           N +I  +++ G    A R+F+ M+ KT V+WNS++AG                       
Sbjct: 9   NRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDI 68

Query: 416 ---------LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                     + N DVESAR  F +MP +D  SWNTM+ G +Q  M ++A ELF VM   
Sbjct: 69  FSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVM-PV 127

Query: 467 RIKVDRVTMVGVASACGYL--GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           R  V    M+      GY+  G LDLAK ++       +       TA++  F + G  +
Sbjct: 128 RNSVSWNAMIS-----GYVESGDLDLAKQLFEVAPVRSVVA----WTAMITGFMKFGKIE 178

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A + F  M  +++  W A I         E  ++LF  M+  G +P+      VL  CS
Sbjct: 179 LAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCS 238

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           +   +  G  + + +     VS  I     ++ +  + G L +A  L   MP + + V W
Sbjct: 239 NLSALKLGKQVHQLICK-SPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP-QKDVVTW 296

Query: 645 GSLLAACQKHQNVDIAAYAAERITE 669
            ++++   +H   + A Y  +++ +
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKMRD 321



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 142/300 (47%), Gaps = 9/300 (3%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N++I G+S  G+  +A  L++      ++P + +  +  NA          + +   + 
Sbjct: 102 WNTMISGFSQNGMMDQARELFL------VMPVRNSVSW--NAMISGYVESGDLDLAKQLF 153

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           ++   R V     +I  + + G I    + F+EM  +N+V+W ++I         +  + 
Sbjct: 154 EVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLK 213

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF  MVE G +PN  ++  V+  C+ L  L+LG +V   I +  +  N     +L+ MY 
Sbjct: 214 LFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYC 273

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG ++ A +LF     +++V  N ++S Y + G   +AL + D+M   G +PD +T ++
Sbjct: 274 KCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVA 333

Query: 346 AVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            +SA    G +  G      ++R+ G+E        ++D+  + GK   A  +   M  K
Sbjct: 334 VLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFK 393



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 117/303 (38%), Gaps = 74/303 (24%)

Query: 37  GSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFE--------------- 81
           G ++NC+  N LK     +++ G    PS +S V+  C+ +   +               
Sbjct: 201 GYIENCQAENGLKL-FKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVS 259

Query: 82  -SLTYAQKAFDYYIK--DNETSATLFM---------YNSLIRGYSCIGLGVEAISLYVEL 129
            ++T        Y K  D E +  LF+         +N++I GY+  G G +A+ L+ ++
Sbjct: 260 WNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKM 319

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE------NCLINFY 183
              G+ PD  TF  VL+AC  +     G++   ++V     RD  VE       C+++  
Sbjct: 320 RDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMV-----RDYGVEAKPDHYTCVVDLL 374

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
           G  G +V                               EAV L  +M     KP+S    
Sbjct: 375 GRGGKLV-------------------------------EAVDLIKKM---PFKPHSAIFG 400

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
            ++ AC   +NLEL +     +  L  ++ A  V  L ++Y      D    +    KD 
Sbjct: 401 TLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQ-LANVYAAMNRWDHVAMVRRSMKDN 459

Query: 304 NLV 306
            ++
Sbjct: 460 KVI 462


>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Brachypodium distachyon]
          Length = 635

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/487 (42%), Positives = 310/487 (63%), Gaps = 1/487 (0%)

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN-KTVVSWNSLIAGLI 417
           G   H   ++ G  G   + N +   Y  CG       +FD +   + VV+WN+++AG +
Sbjct: 149 GSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYV 208

Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
           + G V +AREVF EMP RD +SW+T++GG  +E   + A+ +FR M+ + ++V+   +V 
Sbjct: 209 RAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVT 268

Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
             SA   +G L+  ++++  +++ G+   + +  ALVDMF++CG    A +VF  M +RD
Sbjct: 269 ALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRD 328

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           V AW A I  +A  G G+ AVELF   L +G+ P  I FVGVL ACS  GLV +G   F+
Sbjct: 329 VFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFK 388

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
            M D + + P++ HYGCMVDLLGRAGL+ EA++LI+ M + P+ V+WG++L+AC+ H  V
Sbjct: 389 LMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLV 448

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           D+      ++ EL+P   G +VLL++IYA A KW  V  VR  M  +G  K  G S +E 
Sbjct: 449 DLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSLMEA 508

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
            G +H+F  GD  H +   I +ML  +N RL DAGYVPD+++VL D+ ++EK + +  HS
Sbjct: 509 QGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDIGDEEKVHAIKVHS 568

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           E+LA+A+G I T    PIR+VKNL++C DCH F+K+V+KV++REIIVRD +RFH  ++G 
Sbjct: 569 ERLAIAYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFNREIIVRDGSRFHHMKEGK 628

Query: 838 CSCSDFW 844
           CSC D+W
Sbjct: 629 CSCLDYW 635



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 155/333 (46%), Gaps = 55/333 (16%)

Query: 132 FGILPDK--FTFPFVLNACT--------KSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           F  LP +   +F F+L + +        ++S+F  G  VH   VK G   D++V N L +
Sbjct: 115 FPNLPRRNLHSFTFLLASISNHLDATDHRASSF-LGSHVHALAVKAGAAGDLYVRNALTH 173

Query: 182 FYGECGDIVDGRRVFDEMSE-RNVVSWTSLICACAR-------RDLPKE----------- 222
           FYG CGD+   R VFDE+   R+VV+W +++    R       R++ +E           
Sbjct: 174 FYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWST 233

Query: 223 -------------AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
                        A+ +F +MVE+G++ N   +V  +SA A++  LE G  V   +   G
Sbjct: 234 LVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTG 293

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
           M  +  +  ALVDM+ KCG V  A+++F     R++   N ++      GL ++A+ +  
Sbjct: 294 MPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFW 353

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDM 384
             L  G  P  +T +  ++A ++ G +  GR     M   Y +   +E +      M+D+
Sbjct: 354 RFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHY----GCMVDL 409

Query: 385 YMKCGKQEMACRIFD--HMSNKTVVSWNSLIAG 415
             + G    A  + +  H++   V+ W ++++ 
Sbjct: 410 LGRAGLVSEAIELIEGMHIAPDPVL-WGTVLSA 441



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 148/369 (40%), Gaps = 98/369 (26%)

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC-KDRNLVLCNTIMSNY 315
           LG  V A   + G   +  + NAL   Y  CG V   + +F E  + R++V  N +++ Y
Sbjct: 148 LGSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGY 207

Query: 316 VRLGLAREALAILDEMLLH-------------------------------GPRPDRVTML 344
           VR G+ R A  + +EM +                                G R +   ++
Sbjct: 208 VRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVV 267

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           +A+SA+AQ+G L  GR  H  V R G+    ++   ++DM+ KCG   +A  +FD M  +
Sbjct: 268 TALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRR 327

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V +WN++I GL  +G                               + ++A+ELF   L
Sbjct: 328 DVFAWNAMICGLASHG-------------------------------LGQDAVELFWRFL 356

Query: 465 SERIKVDRVTMVGVASACGYLGAL-DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
            E +    +T VGV +AC   G + +  ++    ++K  I  +M+    +VD+  R G  
Sbjct: 357 DEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLV 416

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A+++   M                                   I PD +++  VL+AC
Sbjct: 417 SEAIELIEGMH----------------------------------IAPDPVLWGTVLSAC 442

Query: 584 SHGGLVNQG 592
               LV+ G
Sbjct: 443 KTHNLVDLG 451



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 12/242 (4%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ F+     +E S     +++L+ GY   G    A+ ++ ++   G+  ++      L
Sbjct: 216 AREVFEEMPVRDEVS-----WSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVTAL 270

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           +A  +      G  VH  + + G    V V   L++ + +CG +   R VFD M  R+V 
Sbjct: 271 SAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDVF 330

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY- 264
           +W ++IC  A   L ++AV LF+  ++EG+ P  +T V V++AC++   +  G R     
Sbjct: 331 AWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLM 390

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMS-----NYVRL 318
           +D+  ++        +VD+  + G V  A +L  G     + VL  T++S     N V L
Sbjct: 391 VDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLVDL 450

Query: 319 GL 320
           G+
Sbjct: 451 GI 452



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 3/161 (1%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           + D      +F +N++I G +  GLG +A+ L+      G+ P   TF  VLNAC++   
Sbjct: 320 VFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGL 379

Query: 154 FGEGVQVHGAIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLI 211
             EG +    +V K   + ++    C+++  G  G + +   + + M    + V W +++
Sbjct: 380 VAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVL 439

Query: 212 CACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAK 251
            AC   +L    + +  +++E E        ++  I A AK
Sbjct: 440 SACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAK 480


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/706 (33%), Positives = 380/706 (53%), Gaps = 39/706 (5%)

Query: 15  PTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           P+     ++H    T +    +    + K++   KQ H H +  GL   P     +    
Sbjct: 4   PSQALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLA 63

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           A         +A+K FD        + +LF +N++IR Y+  GL  +A+ L+V++   G 
Sbjct: 64  AAYAMCGCAPHARKLFD-----ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGR 118

Query: 135 -LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
             PD +T+PFV+ AC        G  +H   V  GFD D FV+N L+  Y  CG++   R
Sbjct: 119 RWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVAR 178

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           RVFD M ER +VSW ++I    +    KEA+ +F  M+ +GI+P+  T+V V+  C+ L+
Sbjct: 179 RVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLK 238

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            LE+G RV A ++   +  +  + N+L+DMY KCG +D A+ +F E   R++V   T+M+
Sbjct: 239 ELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMN 298

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            Y+  G AR AL +   M     +P+ VT+ S +SA A L  L  GR  HG+ +R  LE 
Sbjct: 299 GYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLES 358

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              +   +IDMY KC    ++ R+F   S +                             
Sbjct: 359 EVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAP------------------------- 393

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
                 WN ++ G     +  +A+ELF+ ML E +  +  T+  +  A  +L  L  A+ 
Sbjct: 394 ------WNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARN 447

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD--VSAWTAAIGAMAME 551
           ++ Y+ ++G    +++AT L+D++++CG  + A  +F  + K+D  +  W+A I    M 
Sbjct: 448 MHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMH 507

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G+GE A+ LF++M++ G+KP+ I F  +L ACSH GLV++G  LF+ M + + +S +  H
Sbjct: 508 GHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDH 567

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y C++DLLGRAG L EA +LI++M   PN  +WG+LL +C  H+NV++   AA+ + EL+
Sbjct: 568 YTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELE 627

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           P  +G +VLL+NIY++ G+W +   VRL M   G+RK P  S IEV
Sbjct: 628 PGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/660 (35%), Positives = 353/660 (53%), Gaps = 74/660 (11%)

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           KEAV L         +P++     +I+AC + + LELG RV A+           + N L
Sbjct: 72  KEAVELLHRTDH---RPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRL 128

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           +DMY KCG++  A+ LF E   R+L   NT++  Y +LG   +A  + DEM    P+ D 
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEM----PQRDN 184

Query: 341 VTMLSAVSASAQLGD------------------------------------LLCGRMCHG 364
            +  +A+S                                           L  G+  HG
Sbjct: 185 FSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHG 244

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           Y++R  L   + + + ++D+Y KCG  + A  IFD M ++ VVSW ++I    ++G    
Sbjct: 245 YLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDG---- 300

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                                        EE   LFR ++   ++ +  T  GV +AC  
Sbjct: 301 ---------------------------RREEGFLLFRDLMQSGVRPNEYTFAGVLNACAD 333

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
             A  L K ++ Y+   G        +ALV M+++CG+ + A +VF  M + D+ +WT+ 
Sbjct: 334 HAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSL 393

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I   A  G  ++A+  F  +L+ G KPD + +VGVL+AC+H GLV++G   F S+ + HG
Sbjct: 394 IVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHG 453

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           +     HY C++DLL R+G   EA ++I +MPV+P+  +W SLL  C+ H N+++A  AA
Sbjct: 454 LMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAA 513

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           + + E++PE    ++ L+NIYA+AG W+ VA VR  M   GI K PG S IE+  +VH F
Sbjct: 514 KALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVF 573

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
             GD SHP+ ++I   L E++ ++++ GYVPD   VL DV+E++K+  L +HSEKLA+ F
Sbjct: 574 LVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVF 633

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           G+IST    PI+V KNLR C DCH+  K +SK+  R+I VRD+NRFH F  GSCSC D+W
Sbjct: 634 GIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 202/456 (44%), Gaps = 65/456 (14%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P    +  ++ AC +  A   G +VH       F   VF+ N L++ Y +CG +VD + +
Sbjct: 85  PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144

Query: 196 FDEMSERNVVSWTSLICACAR-------------------------------RDLPKEAV 224
           FDEM  R++ SW ++I   A+                                + P+EA+
Sbjct: 145 FDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREAL 204

Query: 225 YLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            LF  M   E    N  T+   ++A A +  L LG  +  Y+    +  + ++ +AL+D+
Sbjct: 205 ELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDL 264

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG++D A+ +F + KDR++V   T++      G   E   +  +++  G RP+  T 
Sbjct: 265 YGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTF 324

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
              ++A A       G+  HGY++  G +      + ++ MY KCG   +A R+F+ M  
Sbjct: 325 AGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ 384

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
             +VSW SLI G  +NG                                 +EA+  F ++
Sbjct: 385 PDLVSWTSLIVGYAQNGQP-------------------------------DEALHFFELL 413

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           L    K D+VT VGV SAC + G +D   ++ ++  EK+G+         ++D+ AR G 
Sbjct: 414 LQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 473

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
            + A  +   M  K D   W + +G   + GN E A
Sbjct: 474 FKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELA 509



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 175/356 (49%), Gaps = 13/356 (3%)

Query: 75  AQMGTFESLTYAQKAFDYYI-KDNETSATLFMYNSLIRGYSCIGLGVEAISLY-VELAGF 132
           A++G  E    A+K FD    +DN      F +N+ I GY       EA+ L+ V     
Sbjct: 164 AKLGRLEQ---ARKLFDEMPQRDN------FSWNAAISGYVTHNQPREALELFRVMQRHE 214

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
               +KFT    L A         G ++HG +++   + D  V + L++ YG+CG + + 
Sbjct: 215 RSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEA 274

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R +FD+M +R+VVSWT++I  C      +E   LF ++++ G++PN  T   V++ACA  
Sbjct: 275 RGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADH 334

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
               LG  V  Y+   G    +  ++ALV MY KCG    A+++F E    +LV   +++
Sbjct: 335 AAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLI 394

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGL 371
             Y + G   EAL   + +L  G +PD+VT +  +SA    G +  G    H    ++GL
Sbjct: 395 VGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGL 454

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDVESAR 426
                    +ID+  + G+ + A  I D+M  K     W SL+ G   +G++E A+
Sbjct: 455 MHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAK 510


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/708 (33%), Positives = 381/708 (53%), Gaps = 34/708 (4%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE--NC 178
           EA  L+ ++     LPD  TF  +L  C  +       QVH   VK+GFD ++F+   N 
Sbjct: 124 EAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNV 183

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           L+  Y E   +     +F+E+ +++ V++ +LI    +  L  EA++LF +M + G KP+
Sbjct: 184 LLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPS 243

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
             T   V+ A   L +  LG ++       G   +A + N ++  Y K   V   + LF 
Sbjct: 244 DFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFN 303

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           E  + + V  N ++S+Y +     E+L +  EM   G         + +S +A L  L  
Sbjct: 304 EMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQV 363

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           GR  H   +    +    + N+++DMY KC        +FD                   
Sbjct: 364 GRQVHCQAIVATADSILHVGNSLVDMYAKC-------EMFDE------------------ 398

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
                 A  +F  +  R  +SW  ++ G  Q+ +    ++LF  M    ++ D+ T   V
Sbjct: 399 ------AELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATV 452

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             A     +L L K ++A+I ++G   ++   + LVDM+A+CG  + A+QVF  M  R+ 
Sbjct: 453 LKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNA 512

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W A I A A  G+GE A+  F +M++ G++PDS+  +GVL ACSH G V QG   F++
Sbjct: 513 VSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQA 572

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M+ I+G++P+  HY CM+DLLGR G   EA  L+  MP EP++++W S+L AC+ ++N  
Sbjct: 573 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQS 632

Query: 659 IAAYAAERITELDPEK-SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           +A  AAE++  ++  + +  +V +SNIYA+AGKW NV  V+  M+E+GI+K+P  S +EV
Sbjct: 633 LAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEV 692

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
           N K+H F+S D++HP  + I   + E+   +   GY PD ++V+ D+DEQ K   L +HS
Sbjct: 693 NHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHS 752

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           E+LA+AF LIST +  PI V+KNLR C DCH+  KL+SK+  R I  +
Sbjct: 753 ERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 245/506 (48%), Gaps = 49/506 (9%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+LI GY   GL  EAI L++++   G  P  FTF  VL A      F  G Q+HG  V
Sbjct: 212 FNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSV 271

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             GF RD  V N +++FY +   +++ R +F+EM E + VS+  +I + ++ +  +E++ 
Sbjct: 272 TTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLN 331

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV-CAYIDELGMKANALMV-NALVDM 283
           LF EM   G    +     ++S  A L +L++G +V C  I  +    + L V N+LVDM
Sbjct: 332 LFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAI--VATADSILHVGNSLVDM 389

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KC   D A+ +F     R+ V    ++S YV+ GL    L +  +M     R D+ T 
Sbjct: 390 YAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTF 449

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            + + ASA    LL G+  H +++R+G LE   S  + ++DMY KCG  + A ++F+ M 
Sbjct: 450 ATVLKASAGFASLLLGKQLHAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEMP 508

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           ++  VSWN+LI+    NGD E+A                  +G  T+             
Sbjct: 509 DRNAVSWNALISAYADNGDGEAA------------------IGAFTK------------- 537

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           M+   ++ D V+++GV  AC + G ++   ++  A     GI    +    ++D+  R G
Sbjct: 538 MIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNG 597

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE-LFN-EMLRQGIKPDSIV 575
               A ++   M  + D   W++ + A  +  N    E+A E LF+ E LR     D+  
Sbjct: 598 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLR-----DAAA 652

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTD 601
           +V +    +  G      H+ ++M +
Sbjct: 653 YVSMSNIYAAAGKWENVRHVKKAMRE 678



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 227/528 (42%), Gaps = 67/528 (12%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           ++    N +I+ Y + GD+   R +FD M +R VV+WT L+   A  +   EA  LF +M
Sbjct: 73  KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV--NALVDMYMKCG 288
                 P+ VT   ++  C          +V A+  +LG   N  +   N L+  Y +  
Sbjct: 133 CRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVR 192

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +D A  LF E  D++ V  NT+++ Y + GL  EA+ +  +M   G +P   T    + 
Sbjct: 193 RLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLK 252

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A   L D   G+  HG  +  G     S+ N ++  Y K  +                  
Sbjct: 253 AVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDR------------------ 294

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS--- 465
                        V   R +F+EMP  D +S+N ++   +Q   +EE++ LFR M     
Sbjct: 295 -------------VLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGF 341

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA---------LVDM 516
           +R      TM+ +A+    L +L + +          +HC   +ATA         LVDM
Sbjct: 342 DRRNFPFATMLSIAAN---LSSLQVGRQ---------VHCQAIVATADSILHVGNSLVDM 389

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +A+C     A  +F+ + +R   +WTA I     +G     ++LF +M    ++ D   F
Sbjct: 390 YAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTF 449

Query: 577 VGVLTACSHGG--LVNQGWHLF--RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
             VL A +     L+ +  H F  RS     G    +     +VD+  + G + +A+ + 
Sbjct: 450 ATVLKASAGFASLLLGKQLHAFIIRS-----GNLENVFSGSGLVDMYAKCGSIKDAVQVF 504

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           + MP + N V W +L++A   + + + A  A  ++ +   +   V +L
Sbjct: 505 EEMP-DRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSIL 551



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 11/250 (4%)

Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
           R     +++ G        N  ++  ++ G+   A +++D M +K  VS N++I+G +K 
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88

Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
           GD+ SAR +F  MP R  ++W  ++G     N F+EA +LFR M       D VT   + 
Sbjct: 89  GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148

Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR---AMQVFRRMEKR 536
             C      +    ++A+  K G   ++ L    V + + C + +R   A  +F  +  +
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYC-EVRRLDLACVLFEEILDK 207

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D   +   I     +G   +A+ LF +M + G KP    F GVL A         G H F
Sbjct: 208 DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVV-------GLHDF 260

Query: 597 RSMTDIHGVS 606
                +HG+S
Sbjct: 261 ALGQQLHGLS 270



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/388 (19%), Positives = 155/388 (39%), Gaps = 38/388 (9%)

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
           DE+  K N +  N ++  Y+K G + +A+ LF    DR +V    +M  Y       EA 
Sbjct: 68  DEMPHK-NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAF 126

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG--WDSICNTMID 383
            +  +M      PD VT  + +               H + ++ G +   + ++CN ++ 
Sbjct: 127 KLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLK 186

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
            Y +  + ++AC +F+ + +K                               D +++NT+
Sbjct: 187 SYCEVRRLDLACVLFEEILDK-------------------------------DSVTFNTL 215

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G  ++ ++ EA+ LF  M     K    T  GV  A   L    L + ++      G 
Sbjct: 216 ITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGF 275

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D  +   ++  +++         +F  M + D  ++   I + +     E+++ LF E
Sbjct: 276 SRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFRE 335

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLGRA 622
           M   G    +  F  +L+  ++   +  G  +      I   +  I+H G  +VD+  + 
Sbjct: 336 MQCMGFDRRNFPFATMLSIAANLSSLQVGRQV--HCQAIVATADSILHVGNSLVDMYAKC 393

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            +  EA  + KS+  + + V W +L++ 
Sbjct: 394 EMFDEAELIFKSLS-QRSTVSWTALISG 420


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/644 (35%), Positives = 354/644 (54%), Gaps = 71/644 (11%)

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           +P+      +I+AC + + LELG RV A+          ++ N L+ MY KCG++  A+ 
Sbjct: 60  QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG- 354
           LF E   ++L   NT++S Y  +G   +A  + DEM    P  D  +  + +S     G 
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEM----PHRDNFSWNAVISGYVSQGW 175

Query: 355 -----DLL----------C--------------------GRMCHGYVLRNGLEGWDSICN 379
                DL           C                    G+  HGY++R+GLE  + +  
Sbjct: 176 YMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWT 235

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++D+Y KCG                                +  AR +F +M  +D +S
Sbjct: 236 ALLDLYGKCG-------------------------------SLNEARGIFDQMADKDIVS 264

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           W TM+    ++   +E   LFR ++   ++ +  T  GV +AC  L A  + K ++ Y+ 
Sbjct: 265 WTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMT 324

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           + G       A+ALV ++++CG+ + A +VF +M + D+ +WT+ I   A  G  + A++
Sbjct: 325 RVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQ 384

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            F  +LR G KPD I FVGVL+AC+H GLV+ G   F S+ + HG+     HY C++DLL
Sbjct: 385 FFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLL 444

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            R+G   EA ++I +MP++P+  +W SLL  C+ H N+++A  AA+ + EL+PE    ++
Sbjct: 445 ARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYI 504

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
            LSNIYA+AG WT   +VR  M  +GI K PG S IE+  +VH F  GD SHP++++I  
Sbjct: 505 TLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHE 564

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L E++ ++++ GYV D   VL DV+E++K+  + +HSEKLA+AFG+ISTS   PI+V K
Sbjct: 565 YLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFK 624

Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           NLR C DCH+  K +SK+  R+IIVRD+NRFH F  GSCSC D+
Sbjct: 625 NLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 201/456 (44%), Gaps = 65/456 (14%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P    +  ++ AC +      G +VH       F   + + N LI+ Y +CG +VD + +
Sbjct: 61  PSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQML 120

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FDE+ ++++ SW ++I   A     ++A  LF EM        +  +   +S    ++ L
Sbjct: 121 FDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEAL 180

Query: 256 EL--------------------------------GDRVCAYIDELGMKANALMVNALVDM 283
           +L                                G  +  Y+   G++ + ++  AL+D+
Sbjct: 181 DLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDL 240

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG+++ A+ +F +  D+++V   T++      G  +E  ++  +++  G RP+  T 
Sbjct: 241 YGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTF 300

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
              ++A A L     G+  HGY+ R G + +    + ++ +Y KCG  E A R+F+ M  
Sbjct: 301 AGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPR 360

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
             +VSW SLI G  +NG                            Q +M   A++ F  +
Sbjct: 361 PDLVSWTSLIVGYAQNG----------------------------QPDM---ALQFFESL 389

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           L    K D +T VGV SAC + G +D+  ++ ++  EK+G+         ++D+ AR G 
Sbjct: 390 LRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGR 449

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
            + A  +   M  K D   W + +G   + GN E A
Sbjct: 450 FKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELA 485



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 161/326 (49%), Gaps = 3/326 (0%)

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           P+P      + ++A  +   L  G+  H +   +       I N +I MY KCG    A 
Sbjct: 59  PQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQ 118

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
            +FD +  K + SWN++I+G    G +E AR++F EMP RD+ SWN ++ G   +  + E
Sbjct: 119 MLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYME 178

Query: 456 AMELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           A++LFR+M  +E    +  T+    +A   + +L   K I+ Y+ ++G+  D  + TAL+
Sbjct: 179 ALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALL 238

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           D++ +CG    A  +F +M  +D+ +WT  I     +G  ++   LF +++  G++P+  
Sbjct: 239 DLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEY 298

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F GVL AC+       G  +   MT + G  P       +V +  + G    A  +   
Sbjct: 299 TFAGVLNACADLAAEQMGKEVHGYMTRV-GYDPFSFAASALVHVYSKCGNTETARRVFNQ 357

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIA 660
           MP  P+ V W SL+    ++   D+A
Sbjct: 358 MP-RPDLVSWTSLIVGYAQNGQPDMA 382



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 184/367 (50%), Gaps = 17/367 (4%)

Query: 75  AQMGTFESLTYAQKAFDYYI-KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GF 132
           A +G  E    A+K FD    +DN      F +N++I GY   G  +EA+ L+  +    
Sbjct: 140 ANVGRIEQ---ARKLFDEMPHRDN------FSWNAVISGYVSQGWYMEALDLFRMMQENE 190

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
               + FT    L A    S+   G ++HG +++ G + D  V   L++ YG+CG + + 
Sbjct: 191 SSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEA 250

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R +FD+M+++++VSWT++I  C      KE   LF +++  G++PN  T   V++ACA L
Sbjct: 251 RGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADL 310

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
              ++G  V  Y+  +G    +   +ALV +Y KCG  +TA+++F +    +LV   +++
Sbjct: 311 AAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLI 370

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGL 371
             Y + G    AL   + +L  G +PD +T +  +SA    G +  G    H    ++GL
Sbjct: 371 VGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGL 430

Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDVE----SAR 426
                    +ID+  + G+ + A  I D+M  K     W SL+ G   +G++E    +A+
Sbjct: 431 VHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAK 490

Query: 427 EVFSEMP 433
            +F   P
Sbjct: 491 ALFELEP 497


>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
          Length = 1349

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 256/770 (33%), Positives = 401/770 (52%), Gaps = 86/770 (11%)

Query: 43  KTLNELKQPHCHILKQG-LGHKPS--YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           +T+ +  + H H+   G L H PS  ++   +  C        L YA   FD        
Sbjct: 10  RTVRQAAELHAHLTTSGRLLHPPSAHHLLNSLVNCLPPSDPLHLRYALHLFD------RM 63

Query: 100 SATLFMYNSLIRGYSCIGLGVEA------ISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
            A+ F++++ +R  +C   G  +        L+  +    + PD FTF F+   C+ S  
Sbjct: 64  PASTFLFDTALR--ACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFK-CSSS-- 118

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
                                                         S    +  T L  A
Sbjct: 119 ----------------------------------------------SRPRALLCTMLHAA 132

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           C R  LP  A ++   ++                       L L   V    DE+ +K +
Sbjct: 133 CLRTMLPSAAPFVANSLIH------------------MYTELGLAGDVRRAFDEIPVK-D 173

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
           A+    ++    K G +  A+ L  +   R+++   ++++ Y R   A+EA+     ML 
Sbjct: 174 AVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLS 233

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  PD VT++  +SA +QL DL  G   H  V   G+   +++   +IDMY KCG    
Sbjct: 234 EGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGH 293

Query: 394 ACRIFDHMSN-KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           A  +FD +   +   SWN++I G  K+G V+ AR +F +M  RD I++N+M+ G      
Sbjct: 294 AREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQ 353

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
             EA+ LF  M    ++VD  T+V + SAC  LGAL   + ++A IE   +  D+ + TA
Sbjct: 354 LREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTA 413

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+DM+ +CG    A  VF+RM KRDV AWTA I  +A  G G+  +E F +M   G +P+
Sbjct: 414 LLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPN 473

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + ++ VLTACSH  L+N+G   F  M  ++ + PQI HYGCM+DLLGR+GLL EA+DL+
Sbjct: 474 PVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLV 533

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
           K+MP++PN VIW S+L+AC+ H+ +D+A  AAE + +++P++  V+V L NI   + KW 
Sbjct: 534 KTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWE 593

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
           + +++R+ M+E+ ++K  G SS+ V G+VH+F   D+SHP +  I +ML E++ RL+ AG
Sbjct: 594 DASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSAG 653

Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           Y P  + V +DVDE+EK+  L  HSEKLA+AFGL+S +  +P+ ++KNLR
Sbjct: 654 YSPITSQVTVDVDEEEKEQTLLAHSEKLAIAFGLVSLAPNLPVHIIKNLR 703



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 159/622 (25%), Positives = 285/622 (45%), Gaps = 47/622 (7%)

Query: 107  NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
            N +I G+   GL   A ++Y  +   GI     TF  +L  C+      E +Q+HG ++ 
Sbjct: 766  NRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTY----EALQLHGRVLA 821

Query: 167  MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            +G   + FV + L+N Y           +F E+  +N      ++       L +E +  
Sbjct: 822  LGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICC 881

Query: 227  FFEMVEEGIKPNSVTMVCVISACAKLQN---LELGDRVCAYIDELG-MKANALMVNALVD 282
            F +M  + ++ N ++    +  C   QN   LE G ++   + + G + +N  + N+LVD
Sbjct: 882  FLDMRRQYLELNGLSYCYAMKGC--YQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVD 939

Query: 283  MYMKCG-AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            +Y   G +VDT K L  +    +++  N+I+S Y   G  +EA+  L +ML HG  P   
Sbjct: 940  LYSAIGDSVDTVKAL-NDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIR 998

Query: 342  TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACRIFDH 400
            + +S ++ S + GD   G   HG V + G       +  T+IDMY KC      C  FDH
Sbjct: 999  SFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKC-----CC--FDH 1051

Query: 401  MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
                                    +  +F+E+P       N+++    + NMF+ A+E+ 
Sbjct: 1052 ------------------------SLAIFNEIPSIALECCNSLITSSLRCNMFDAALEIL 1087

Query: 461  RVMLSERIKVDRVTMVGVASACGYLGALDLA--KWIYAYIEKNGIHCDMQLATALVDMFA 518
              M+ E +  D VT      A     +  L   + +++ + K G   DM + ++L+  +A
Sbjct: 1088 HCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYA 1147

Query: 519  RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
              G    +  +F  +   +V  +TA I A A  G+G +A+ELF++M+  G+KPD++ F+ 
Sbjct: 1148 CAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLC 1207

Query: 579  VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
             +  C   G+  +G  +   M     + P   H+ CMV+LL R G + EA+++++  P+ 
Sbjct: 1208 AIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLR 1267

Query: 639  PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
                 W SLL +C+ H    +   AA  + ++  +     + +SN +   G      R++
Sbjct: 1268 HYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIK 1327

Query: 699  LQMKEQGIRKLPGSSSIEVNGK 720
                 + ++K  G S IEV+ +
Sbjct: 1328 EMTNVKEVKK-SGHSLIEVSHR 1348



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 3/265 (1%)

Query: 100  SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
            S  +  +NS++  Y+  G   EA+    ++   G +P   +F  +L    K+  +  GVQ
Sbjct: 959  SEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQ 1018

Query: 160  VHGAIVKMGFD-RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +HG + K+GF    V V+  LI+ YG+C        +F+E+    +    SLI +  R +
Sbjct: 1019 IHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCN 1078

Query: 219  LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG--DRVCAYIDELGMKANALM 276
            +   A+ +   M+ EG+ P+ VT    + A +   +  L     + + + +LG + +  +
Sbjct: 1079 MFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAV 1138

Query: 277  VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             ++L+  Y   G + ++  +F    D N++    I+S   R G    A+ + D+M+  G 
Sbjct: 1139 CSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGL 1198

Query: 337  RPDRVTMLSAVSASAQLGDLLCGRM 361
            +PD VT L A++   Q G    GR+
Sbjct: 1199 KPDNVTFLCAIAGCDQAGMFEEGRL 1223



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 137/318 (43%), Gaps = 40/318 (12%)

Query: 13  ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISK 69
           A   V    N       P D   IG L  C  L +L+     H  + ++G+    + +  
Sbjct: 221 AKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVA 280

Query: 70  VVCTCAQMGTFESLTYAQKAFDY----------------YIKDN--ETSATLF------- 104
           ++   A+ G F    +A++ FD                 Y K    + + +LF       
Sbjct: 281 LIDMYAKCGDF---GHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRD 337

Query: 105 --MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
              +NS+I GY   G   EA+ L++ +    +  D FT   +L+AC    A  +G  +H 
Sbjct: 338 IITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHA 397

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            I     + D+++   L++ Y +CG + +   VF  M +R+V +WT++I   A   + K 
Sbjct: 398 CIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKA 457

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL----MVN 278
            +  F++M  +G +PN V+ + V++AC+    L  G     Y DE+ +  N         
Sbjct: 458 GLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGR---LYFDEMRILYNIHPQIEHYG 514

Query: 279 ALVDMYMKCGAVDTAKQL 296
            ++D+  + G +D A  L
Sbjct: 515 CMIDLLGRSGLLDEAMDL 532


>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
          Length = 651

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/502 (42%), Positives = 312/502 (62%), Gaps = 2/502 (0%)

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           L+A   SA     L G   H   ++ G  G   + N ++  Y   G      R+FD +  
Sbjct: 151 LNAAGPSASACSFL-GSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPR 209

Query: 404 -KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            + V++WN ++AG ++ G +  AREVF EMP RD ISW+T++GG  +E   E A+ +FR 
Sbjct: 210 VRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRN 269

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           M+ + ++ ++  +V   SA   LG L+  K+++  ++++G+   M +  ALVDM+A+CG 
Sbjct: 270 MVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGC 329

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              A +VF  M +RDV AW A I  +A  G G  AVELF   + +G+ P ++ FVGVL  
Sbjct: 330 VAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNG 389

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           CS  GLV +G   F+ + + + + P++ HYGCMVDLLGRAGL+ EA++LI+ M + P+ V
Sbjct: 390 CSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPV 449

Query: 643 IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMK 702
           +WG++L++C+ H  VD+      ++ ELDP  SG +VLLS IYA A KW  V  VR  M 
Sbjct: 450 LWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMS 509

Query: 703 EQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL 762
            +G  K  G S +E +GKVH+F  GD  H +   I   L  +N RL +AGYVPD+++VL 
Sbjct: 510 SRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLH 569

Query: 763 DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREI 822
           D+ E+EK + +  HSE+LA+A+G I      PIR+VKNLR+C DCH F+K+V+ V+ REI
Sbjct: 570 DIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREI 629

Query: 823 IVRDNNRFHFFRQGSCSCSDFW 844
           IVRD +RFH  ++G CSC D+W
Sbjct: 630 IVRDGSRFHHMKEGKCSCLDYW 651



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 54/380 (14%)

Query: 136 PDKFTFPFV-----LNACTKSSAFGE--GVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           P  FTF        LNA   S++     G  VH   VK G   D+FV N L++FYG  GD
Sbjct: 137 PHSFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGD 196

Query: 189 IVDGRRVFDE--------------------------------MSERNVVSWTSLICACAR 216
           +   RRVFDE                                M  R+ +SW++L+    +
Sbjct: 197 VGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVK 256

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
            +  + A+ +F  MVE+G++PN   +V  +SA A+L  LE G  V   +   GM     +
Sbjct: 257 EEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNV 316

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             ALVDMY KCG V  A+++F   + R++   N ++      GL R+A+ + +  +  G 
Sbjct: 317 GAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGL 376

Query: 337 RPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
            P  VT +  ++  ++ G +  GR     +   Y +   +E +      M+D+  + G  
Sbjct: 377 SPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHY----GCMVDLLGRAGLV 432

Query: 392 EMACRIFD--HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD--HISWNTMLGGL 447
             A  + +  H++   V+ W ++++    +G V+    V +++   D  H  +  +L G+
Sbjct: 433 PEAIELIEGMHIAPDPVL-WGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGI 491

Query: 448 -TQENMFEEAMELFRVMLSE 466
             + N ++E  E+ ++M S 
Sbjct: 492 YAKANKWDEVREVRKLMSSR 511



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 8/276 (2%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           +T A++ FD     +E S     +++L+ GY        A+ ++  +   G+ P++    
Sbjct: 229 MTVAREVFDEMPVRDEIS-----WSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVV 283

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
             L+A  +      G  VH  + + G    + V   L++ Y +CG +   R VFD M  R
Sbjct: 284 TALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRR 343

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           +V +W ++IC  A   L ++AV LF   + EG+ P +VT V V++ C++   +  G R  
Sbjct: 344 DVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYF 403

Query: 263 AYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMSNYVRLGL 320
             I ++  ++        +VD+  + G V  A +L  G     + VL  TI+S+    GL
Sbjct: 404 KLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGL 463

Query: 321 AREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGD 355
               +++ ++++   P       +LS + A A   D
Sbjct: 464 VDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWD 499


>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 564

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/559 (38%), Positives = 335/559 (59%), Gaps = 34/559 (6%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRL-GLAREALAILDEMLLHG-PRPDRVTMLS 345
           G ++ A+ +F +    N+   N+++  Y ++  L++E + +  ++   G P P+  T+  
Sbjct: 38  GNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A A +     G   H +VL++G      +  ++++ Y KC                 
Sbjct: 98  VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCE---------------- 141

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                          ++  AR+VF EMP R+ ++W  M+ G  +    +EAMELFR M  
Sbjct: 142 ---------------EIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQK 186

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             I+ D +T+V V SAC   GALD+  W++AYIEK  +  D++L+TALVDM+A+CG  +R
Sbjct: 187 AGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIER 246

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A QVF  M  +D +AW++ I   A  G  + A++ F +ML   + PD + F+ VL+AC+H
Sbjct: 247 AKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAH 306

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
           GGLV++G   +  M +  G+ P + HYGC VDLL R+GL+ EA  +  +M + PN   W 
Sbjct: 307 GGLVSRGRRFWSLMLEF-GIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWR 365

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           SLL  C+K + +++    A  + EL+P  +  ++++SN+Y+S  +W  ++ +R  MKE+ 
Sbjct: 366 SLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKC 425

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           I+ +PG SSIEV+G VHEF  GD+SHPE+  +   + EM+ R+RD+GY P +++VL  V 
Sbjct: 426 IKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDVLHKVV 485

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           ++EK+  LS HSE+ A+A+GL+ T   + IRVVKNLR+C DCH   K++SK+Y+REIIVR
Sbjct: 486 DEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYEREIIVR 545

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D  RFH F +G+CSC DFW
Sbjct: 546 DRVRFHKFIKGTCSCKDFW 564



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 153/434 (35%), Positives = 236/434 (54%), Gaps = 22/434 (5%)

Query: 48  LKQPHCHILKQGL--GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
           L+Q H HIL + L        +SK+V  CA +  F ++ YA+  F      N     +F 
Sbjct: 4   LRQLHAHILTRPLPLSSFAFALSKIVAFCA-LSPFGNINYARSVFAQIPHPN-----IFS 57

Query: 106 YNSLIRGYSCI-GLGVEAISLYVELAGFGI-LPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           +NSLI+GYS I  L  E I L+ +L   G  +P+ FT  FVL AC   +AFGEG+QVH  
Sbjct: 58  WNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSH 117

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K GF   +FV+  L+NFYG+C +I   R+VF+EM  RN+V+WT++I   AR     EA
Sbjct: 118 VLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEA 177

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + LF EM + GI+P+++T+V V+SACA    L++G  + AYI++  +  +  +  ALVDM
Sbjct: 178 MELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDM 237

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y KCG ++ AKQ+F     ++    ++++  +   GLA++A+    +ML     PD VT 
Sbjct: 238 YAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTF 297

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           L+ +SA A  G +  GR     +L  G+E         +D+  + G  E A RI   M  
Sbjct: 298 LAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKI 357

Query: 403 NKTVVSWNSLIAG-----LIKNGDVESAREVFSEMP--GRDHISWNTMLGGLTQENMFEE 455
                +W SL+ G     L+  G++  AR +    P    ++I  + +   L+Q   +E+
Sbjct: 358 PPNAATWRSLLMGCKKKKLLNLGEI-VARYLLELEPLNAENYIMISNLYSSLSQ---WEK 413

Query: 456 AMELFRVMLSERIK 469
             EL +VM  + IK
Sbjct: 414 MSELRKVMKEKCIK 427


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/703 (34%), Positives = 384/703 (54%), Gaps = 65/703 (9%)

Query: 20  LTNQHKAKTTPKDSPSIGSLKNC----------KTLNELKQPHCHILKQGLGHKPSYI-- 67
           L+N +  K   K    I ++  C          ++LN+ K  H H +  GL H P++I  
Sbjct: 60  LSNSNTTKALSKSKSLIANVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHL 119

Query: 68  ------SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
                 S   C C  +        A+K FD     + +  +LF++N++I+ Y   G   +
Sbjct: 120 PSHLAVSYAFCGCVPL--------ARKLFD-----DLSDPSLFLWNAIIKMYVDKGFHFD 166

Query: 122 AISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           A+ ++  +   G   PDK+TFP V+ AC+  S    GV +HG  +  GF  ++FV+N L+
Sbjct: 167 ALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLL 226

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
             Y  CG +   R+VF+ M +R+VVSW ++I    +   P+EA+ +F  M++  ++P+S 
Sbjct: 227 AMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSA 286

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T+V  + +C  L+ LELG +V   + +  ++    + NALVDMY +CG +D A  +F E 
Sbjct: 287 TIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAET 346

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           K+++++   ++++ Y+  G A+ ALA+   M L G  P+ VT+ S +SA A L  L  G+
Sbjct: 347 KEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGK 406

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H +V+R  L+    +   +IDMY KC     + ++F   S K  V WN+L++GLI N 
Sbjct: 407 SLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHN- 465

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
             E AR                            EA+ LF+ ML E ++ +  T   V  
Sbjct: 466 --ELAR----------------------------EAVGLFKSMLIEEVEANHATFNSVIP 495

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM--EKRDV 538
           A   L  L     +++Y+ ++G    + + T L+DM+++CG    A ++F  +  +++D+
Sbjct: 496 AYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDI 555

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
             W+  I    M G+GE AV LFN+M+  G++P+ I F  VL ACSH GLV+ G  LF+ 
Sbjct: 556 IVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKY 615

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M + +  SP   HY C+VDLLGRAG L EA DLIKSMP + N  IWG+LL AC  HQNV+
Sbjct: 616 MIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVE 675

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           +   AAER+ EL+PE +G ++LL+NIYA+ G+W +    +LQ+
Sbjct: 676 LGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENHKLQL 718


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/688 (34%), Positives = 386/688 (56%), Gaps = 26/688 (3%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           VH  ++K G   + FV + L+N Y +CG +V+ R+VFD +  RNVV WT+L+    +   
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
           P+ AV +F +M+E G  P++ T+   ++AC+ L+++ LG +  A+I +  +  ++ + NA
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L  +Y K G++D++ + F E  +++++   TI+S     G A   L +  EML     P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             T+ S +S  + +     G   H    + G E    I N+++ +Y+KCG  + A  +F+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M  K +++WN++IAG  +  D+  A++ FS                   +    EA+ +
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDL--AKDNFS------------------AQQTGTEALGM 281

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           +  +     K D  T+  + + C  L AL+  + I+A   K+G   D+ + TALVDM+ +
Sbjct: 282 YLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDK 341

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           CG  +RA + F  M  R + +WT+ I + A  G  + A++LF +M   G +P+ I FVGV
Sbjct: 342 CGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGV 401

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L ACSH G+V++    F  M   + + P + HYGC+VD+  R G L EA D+IK M VEP
Sbjct: 402 LAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEP 461

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
           N+ IW  L+A C+ H N ++  YAAE++ +L P  +  +V+L N+Y SA +W +V+ VR 
Sbjct: 462 NEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRR 521

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            MKE+ + KL   S I + G+VH F + +  H     + ++L ++  R +  GY   L N
Sbjct: 522 LMKEEKVGKLKDWSRISIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGY-EQLEN 580

Query: 760 --VLLDVDEQEKKYLLS---HHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
             V+ D +E+ ++   S   +HSEKLA+ FGL++T    PIRV+K++ +C DCH F K+V
Sbjct: 581 MEVIDDEEEEAEEKAFSSAVYHSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVV 640

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           S    R II++D  R H F  G CSC+D
Sbjct: 641 SSQTTRHIIIKDGKRLHKFVNGQCSCAD 668



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 250/538 (46%), Gaps = 60/538 (11%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H H++K G   +   +S +V   A+ G    +  A+K FD   + N     + ++ +L+ 
Sbjct: 3   HAHVIKTGTHEEFFVMSFLVNVYAKCGV---MVNARKVFDNLPRRN-----VVVWTTLMT 54

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR 171
           GY        A+ ++ ++   G  P  FT    LNAC+   +   G Q H  I+K     
Sbjct: 55  GYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISH 114

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           D  + N L + Y + G +    + F E  E++V+SWT++I AC         + LF EM+
Sbjct: 115 DSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEML 174

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            E ++PN  T+  V+S C+ +Q+ +LG +V +   +LG ++N  + N+LV +Y+KCG +D
Sbjct: 175 FENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCID 234

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVR-LGLAR----------EALAILDEMLLHGPRPDR 340
            AK LF   + +NL+  N +++ + + + LA+          EAL +  ++   G +PD 
Sbjct: 235 EAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDL 294

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            T+ S ++  ++L  L  G   H   +++G      +   ++DMY KCG  E A + F  
Sbjct: 295 FTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLD 354

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP----GRDHISWNTMLGGLTQENMFEEA 456
           MS +T++SW S+I    ++G  + A ++F +M       + I++  +L   +   M +EA
Sbjct: 355 MSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEA 414

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +E F +M  E  K+  V                                 M     LVDM
Sbjct: 415 LEYFEIMQKE-YKIKPV---------------------------------MDHYGCLVDM 440

Query: 517 FARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           F R G    A  V +RM+ + +   W   I      GN E       ++L+  +KP S
Sbjct: 441 FVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLK--LKPRS 496



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 45/312 (14%)

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
           M H +V++ G      + + ++++Y KCG    A ++FD++  + VV W +L+ G ++N 
Sbjct: 1   MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
             E A EVF +M        N                                T+    +
Sbjct: 61  QPEVAVEVFGDMLESGSFPSN-------------------------------FTLSIALN 89

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           AC  L ++ L K  +A+I K  I  D  +  AL  ++++ G    +++ FR   ++DV +
Sbjct: 90  ACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVIS 149

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMT 600
           WT  I A    G     + LF EML + ++P+      VL+ CS     + G        
Sbjct: 150 WTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLG-------M 202

Query: 601 DIHGVSPQIVH------YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
            +H +S ++ H         +V L  + G + EA +L   M  + N + W +++A   + 
Sbjct: 203 QVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYK-NLITWNAMIAGHAQA 261

Query: 655 QNVDIAAYAAER 666
            ++    ++A++
Sbjct: 262 MDLAKDNFSAQQ 273


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/684 (34%), Positives = 360/684 (52%), Gaps = 37/684 (5%)

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
           MGF  D+ + N LI  YG+CG +     VFD M +RNVVSWT+L+C   +   P E++ L
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F +M   G+KPN  T    + AC  L  L++G ++     + G     ++ N+++DMY K
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           CG ++ A  +F     RNL+  N +++ Y   G   +AL +  +M   G   D  T  S 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGL--EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           + A + LG +  G   H +++  G       ++   +ID+Y+KCGK  MA R+F H+  K
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V+SW +LI G                                 QE    E+MELFR + 
Sbjct: 241 HVISWTALILG-------------------------------YAQEGNLAESMELFRQLR 269

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              I+VD   +  +         +   K ++A+  K     D+ +  +++DM+ +CG   
Sbjct: 270 ESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMIN 329

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A ++F  M  R+V +WT  I      G G++A+ LF+EM     +PD + ++ VL  CS
Sbjct: 330 EAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCS 389

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLV +G   F  +   HG+  ++ HY CMVDLLGRAG L EA +L+ SMP+E N  IW
Sbjct: 390 HSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIW 449

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LL+AC+ H ++++       +  LD E    +V++SNIYA AG W    R+R  +K +
Sbjct: 450 QTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSK 509

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA-GYVPDLTNVLLD 763
            ++K  G S +E++ +VH F  GD++HP    I  +L+EM  R+++  GYV  +   L D
Sbjct: 510 KLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRMKEELGYVYGVKYALHD 569

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLIS---TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDR 820
           V+E+ K   L  HSEKLA+   L+          IRV KNLR+C DCH F K +SK+   
Sbjct: 570 VEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRV 629

Query: 821 EIIVRDNNRFHFFRQGSCSCSDFW 844
             +VRD NRFH F  G CSC D+W
Sbjct: 630 VFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 228/490 (46%), Gaps = 44/490 (8%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A   FD  +K N  S T  M   +  G       +E++ L+ ++   G+ P+ FTF 
Sbjct: 23  LGVACDVFDRMLKRNVVSWTALMCGHIQNGNP-----LESLLLFSKMGLSGVKPNDFTFS 77

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
             L AC   +    G Q+H   VK GFD    V N +I+ Y +CG I +   +F+ M  R
Sbjct: 78  TNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVR 137

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N++SW ++I         ++A+ LF +M E G   +  T    + AC+ L  ++ G+++ 
Sbjct: 138 NLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIH 197

Query: 263 AYIDELGM--KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           A++   G     N  +  AL+D+Y+KCG +  A+++F   ++++++    ++  Y + G 
Sbjct: 198 AFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGN 257

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSIC 378
             E++ +  ++     + D   + S +   A    +  G+  H + ++  +G++   S+C
Sbjct: 258 LAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVD--ISVC 315

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N+++DMY+KCG    A R+F  M  + V+SW  +I G  K+G                  
Sbjct: 316 NSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHG------------------ 357

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                LG        +EA+ LF  M  +  + D VT + V   C + G ++  +  ++ +
Sbjct: 358 -----LG--------KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRL 404

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQ 556
              +GI   ++    +VD+  R G  + A  +   M  + +V  W   + A  + G+ E 
Sbjct: 405 CSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLEL 464

Query: 557 AVELFNEMLR 566
             E+   +LR
Sbjct: 465 GKEVGGILLR 474



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 13/254 (5%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +LI GY+  G   E++ L+ +L    I  D F    ++      +   +G Q+H   +
Sbjct: 245 WTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAI 304

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+    D+ V N +++ Y +CG I +  R+F EM  RNV+SWT +I    +  L KEA+ 
Sbjct: 305 KVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIR 364

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD----RVCAYIDELGMKANALMVNALV 281
           LF EM  +  +P+ VT + V+  C+    +E G     R+C+Y    G+KA       +V
Sbjct: 365 LFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSY---HGIKARVEHYACMV 421

Query: 282 DMYMKCGAVDTAKQLFGECK-DRNLVLCNTIMSN---YVRLGLAREALAILDEMLLHGPR 337
           D+  + G +  AK L      + N+ +  T++S    +  L L +E   IL  + L    
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGIL--LRLDSEN 479

Query: 338 PDRVTMLSAVSASA 351
           P    M+S + A A
Sbjct: 480 PVNYVMMSNIYADA 493


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/602 (36%), Positives = 344/602 (57%), Gaps = 33/602 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           +++ C   + +  G RV A++ +        +   L+ +Y KC  +  A+ +F E ++RN
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +V    ++S Y + G A EAL +  +ML     P+  T  + +S+         GR  H 
Sbjct: 76  VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           ++ +   E    + ++++DMY K G+                               +  
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGR-------------------------------IHE 164

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           AR VF  +P RD +S   ++ G  Q  + EEA+ELF  +  E +  + VT   + +A   
Sbjct: 165 ARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSG 224

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           L ALD  K +++++ +  +   + L  +L+DM+++CG+   A ++F  M  R V +W A 
Sbjct: 225 LAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAM 284

Query: 545 IGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI- 602
           +   +  G G + V+LF  M  +  +KPDS+ F+ VL+ CSHGGL ++G  +F  M +  
Sbjct: 285 LVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGG 344

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
             +   I HYGC++DLLGRAG + EA +LIK MP EP   IWGSLL AC+ H N +I  +
Sbjct: 345 DEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEF 404

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
              R+ E++PE +G +V+LSN+YASAG+W +V  VR  M E+ + K PG S IE++  +H
Sbjct: 405 VGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIH 464

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
            F + D SHP    +   +RE+  + +++GYVPD + VL DVDE++K+ +L  HSEKLA+
Sbjct: 465 TFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLAL 524

Query: 783 AFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           AFGLISTS+ +P+RV+KNLR+C DCH+FAK VSKVY R++ +RD NRFH    G CSC D
Sbjct: 525 AFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGD 584

Query: 843 FW 844
           +W
Sbjct: 585 YW 586



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 212/417 (50%), Gaps = 35/417 (8%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +LN C    A  EG +VH  ++K  +   V++   LI  Y +C  +   R VFDEM 
Sbjct: 13  YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           ERNVVSWT++I   ++R    EA++LF +M+    +PN  T   V+S+C      ELG +
Sbjct: 73  ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           + ++I +   + +  + ++L+DMY K G +  A+ +F    +R++V C  I+S Y +LGL
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             EAL +   +   G   + VT  S ++A + L  L  G+  H +VLR  L  +  + N+
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS 252

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +IDMY KCG    A +IF++M  +TV+SWN+++ G  K+G                    
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGK------------------- 293

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                G+       E ++LF++M  E ++K D VT + V S C + G  D    ++  + 
Sbjct: 294 -----GI-------EVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMM 341

Query: 500 KNG--IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN 553
             G  I   ++    ++D+  R G  + A ++ ++M     +A W + +GA  +  N
Sbjct: 342 NGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSN 398



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 199/408 (48%), Gaps = 39/408 (9%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETS 100
           N + + E ++ H H++K      P Y+S  +         E L  A+  FD   + N  S
Sbjct: 22  NKRAVREGQRVHAHMIKTCY-LPPVYLSTRLIILYT--KCECLGCARHVFDEMRERNVVS 78

Query: 101 ATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
            T     ++I GYS  G   EA+ L+V++      P++FTF  VL++CT  S F  G Q+
Sbjct: 79  WT-----AMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQI 133

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
           H  I K  ++  +FV + L++ Y + G I + R VF+ + ER+VVS T++I   A+  L 
Sbjct: 134 HSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLD 193

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           +EA+ LF  +  EG+  N VT   +++A + L  L+ G +V +++    +    ++ N+L
Sbjct: 194 EEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSL 253

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPD 339
           +DMY KCG ++ A+++F     R ++  N ++  Y + G   E + +   M      +PD
Sbjct: 254 IDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPD 313

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
            VT L+ +S  +           HG +   GLE +D + N         G  E+   I +
Sbjct: 314 SVTFLAVLSGCS-----------HGGLEDKGLEMFDEMMN---------GGDEIEAGI-E 352

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS-WNTMLGG 446
           H        +  +I  L + G VE A E+  +MP     + W ++LG 
Sbjct: 353 H--------YGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGA 392


>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/580 (39%), Positives = 334/580 (57%), Gaps = 35/580 (6%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G   +  MV  L+    KC A+D A ++F    + N+ L   ++  +V  G   EA+ + 
Sbjct: 66  GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLY 125

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             ML     PD   M S + A      L  GR  H   L+ G      +   ++++Y KC
Sbjct: 126 SRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKC 185

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP----GRDHISWNTML 444
           G                               ++  AR VF EMP     +D + W  M+
Sbjct: 186 G-------------------------------ELGDARRVFEEMPEDVVAKDTVCWTAMI 214

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
            G  +      A+E FR M  E ++ +  T+V V SAC  LGAL++ +W+++Y+ K  I 
Sbjct: 215 DGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIE 274

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            ++ +  AL++M++RCG    A  VF  M+ RDV  +   I  ++M G   QA+ELF  M
Sbjct: 275 LNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVM 334

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
           + + ++P ++ FVGVL ACSHGGLV+ G+ +F SM   + V PQI HYGCMVDLLGR G 
Sbjct: 335 VGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGR 394

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA DLI++M + P+ ++ G+LL+AC+ H+N+++    A+ + +     SG +VLLS++
Sbjct: 395 LEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHV 454

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           YAS+GKW   A+VR +MKE G++K PG SSIEVN ++HEF  GD  HP+   I   L E+
Sbjct: 455 YASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEEL 514

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
           N  LR  GY P+   VL D+++ EK++ L+ HSE+LA+ +GLIST     IRV+KNLR+C
Sbjct: 515 NRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVC 574

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCHS  KL++K+  R+I+VRD NRFH+F  G+CSC D+W
Sbjct: 575 YDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 614



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 220/438 (50%), Gaps = 23/438 (5%)

Query: 9   PLVLATPTVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHCHILKQGLGHKPSYI 67
           P    +P     +N +       D   I SL +  + +N++   H  +++ G    P  +
Sbjct: 15  PFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMV 74

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
            +++ +C++     ++ YA + F Y    N     +++Y +LI G+   G  +EAI LY 
Sbjct: 75  FELLRSCSKC---HAIDYASRIFQYTHNPN-----VYLYTALIDGFVSSGNYLEAIQLYS 126

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
            +    ILPD +    +L AC    A  EG +VH   +K+GF  +  V   ++  YG+CG
Sbjct: 127 RMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCG 186

Query: 188 DIVDGRRVFDEMSE----RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
           ++ D RRVF+EM E    ++ V WT++I    R +    A+  F  M  E ++PN  T+V
Sbjct: 187 ELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIV 246

Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
           CV+SAC++L  LE+G  V +Y+ +  ++ N  + NAL++MY +CG++D A+ +F E KDR
Sbjct: 247 CVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR 306

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG---- 359
           +++  NT++S     G +R+A+ +   M+    RP  VT +  ++A +  G +  G    
Sbjct: 307 DVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIF 366

Query: 360 -RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLI 417
             M   Y +   +E +      M+D+  + G+ E A  +   M      +   +L++   
Sbjct: 367 HSMARDYRVEPQIEHY----GCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACK 422

Query: 418 KNGDVESAREVFSEMPGR 435
            + ++E   +V  E+  R
Sbjct: 423 MHKNLELGEQVAKELEDR 440



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 201/440 (45%), Gaps = 38/440 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +++   +S    + + +H  +++ G  +D F+   L+    +C  I    R+F      N
Sbjct: 42  IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 101

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V  +T+LI          EA+ L+  M+ E I P++  M  ++ AC     L  G  V +
Sbjct: 102 VYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHS 161

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD----RNLVLCNTIMSNYVRLG 319
              +LG  +N L+   ++++Y KCG +  A+++F E  +    ++ V    ++  +VR  
Sbjct: 162 RALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNE 221

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
               AL     M     RP+  T++  +SA +QLG L  GR  H Y+ +  +E    + N
Sbjct: 222 ETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGN 281

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            +I+MY +CG  + A  +FD M ++ V+++N++I+GL  NG    A              
Sbjct: 282 ALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQA-------------- 327

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                            +ELFRVM+  R++   VT VGV +AC + G +D    I+  + 
Sbjct: 328 -----------------IELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMA 370

Query: 500 KN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           ++  +   ++    +VD+  R G  + A  + R M+   D       + A  M  N E  
Sbjct: 371 RDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELG 430

Query: 558 VELFNEMLRQGIKPDSIVFV 577
            ++  E+  +G + DS  +V
Sbjct: 431 EQVAKELEDRG-QADSGTYV 449



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 41/309 (13%)

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D+  ++S +  S  +  +L     H  ++RNG      +   ++    KC   + A RIF
Sbjct: 38  DQKQIISLLQRSRHINQVL---PIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIF 94

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
            +  N  V  + +LI G + +G+                               + EA++
Sbjct: 95  QYTHNPNVYLYTALIDGFVSSGN-------------------------------YLEAIQ 123

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           L+  ML E I  D   M  +  ACG   AL   + +++   K G   +  +   +++++ 
Sbjct: 124 LYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYG 183

Query: 519 RCGDPQRAMQVFRRMEK----RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           +CG+   A +VF  M +    +D   WTA I          +A+E F  M  + ++P+  
Sbjct: 184 KCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEF 243

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
             V VL+ACS  G +  G  +   M     +   +     ++++  R G + EA  +   
Sbjct: 244 TIVCVLSACSQLGALEIGRWVHSYMRKFE-IELNLFVGNALINMYSRCGSIDEAQTVFDE 302

Query: 635 MPVEPNDVI 643
           M  +  DVI
Sbjct: 303 M--KDRDVI 309



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 4/173 (2%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+A + +NG   D  +   L+   ++C     A ++F+     +V  +TA I      GN
Sbjct: 58  IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
             +A++L++ ML + I PD+ +   +L AC     + +G  +      +   S ++V   
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 177

Query: 614 CMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAACQKHQNVDIAAYA 663
            M +L G+ G LG+A  + + MP   V  + V W +++    +++  + A  A
Sbjct: 178 IM-ELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEA 229


>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Brachypodium distachyon]
          Length = 552

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/548 (40%), Positives = 332/548 (60%), Gaps = 4/548 (0%)

Query: 226 LFFEMVEEGIKPNSVTMVCVISAC-AKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
           ++  M+  G +P++ T   ++ A  A  +   +GD V A++ + GM+ NA + ++LV MY
Sbjct: 5   VYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMY 64

Query: 285 MKCGAVDTAKQLFGECKDR---NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
              G    A+ L      R     V+ N ++S + R    R +     +M+  G  P  V
Sbjct: 65  AARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPV 124

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T ++ +SA  +   +  G   H  V+ +G+     + N +IDMY +C + + A  +F+ M
Sbjct: 125 TYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGM 184

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             +  VSW S+I+G ++ G V+ AR +F  MP RD +SW  M+ G  Q   F EA+E+FR
Sbjct: 185 EVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFR 244

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M   +++ D  TMV V +AC  LGAL+  +W   Y+ ++GI  D  +  ALVDM+++CG
Sbjct: 245 EMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCG 304

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             Q+A+ VF+ M  RD   WTA I  +A+ G+GE+A+ +F  MLR    PD + F+GVLT
Sbjct: 305 SIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLT 364

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           AC+H GLV++G   F SMT  +G++P ++H+GC++DLLGRAG L EAL+ I +MP+ PN 
Sbjct: 365 ACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNS 424

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            IWG+LLAAC+ H N +I   AAE + ELD E   V++LLSN+YA + +W +V R+R  +
Sbjct: 425 AIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVI 484

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            E+GI+K PG S IE+NG +HEF +GD SHP    I S L ++   L+DAGYVPDLT + 
Sbjct: 485 MEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLKDAGYVPDLTEIF 544

Query: 762 LDVDEQEK 769
           + V  +EK
Sbjct: 545 VQVTREEK 552



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 205/470 (43%), Gaps = 68/470 (14%)

Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE-GVQVHGAIVKMGFDRDVFVENCLIN 181
           + +YV +   G  PD +TFP +L A T ++  G  G  VH  +VK G + +  V + L+ 
Sbjct: 3   LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVL 62

Query: 182 FYGECGDIVDGRRVFDEMSER---NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
            Y   GD    R + D    R     V W +LI    R    + +   F +MV  G+ P 
Sbjct: 63  MYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPT 122

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            VT + V+SAC K + + LG +V   +   G+  +  + NAL+DMY +C  +D A +LF 
Sbjct: 123 PVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFE 182

Query: 299 ECKDRNLVLCNTIMSNYVRLGLA-------------------------------REALAI 327
             + RN V   +++S ++RLG                                 REAL +
Sbjct: 183 GMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEM 242

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
             EM     R D  TM+S V+A AQLG L  G     Y+ R+G++    + N ++DMY K
Sbjct: 243 FREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSK 302

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  + A  +F  M  +   +W ++I GL  NG                           
Sbjct: 303 CGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGH-------------------------- 336

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCD 506
                 EEA+ +F  ML      D VT +GV +AC + G +D  + +  +     GI  +
Sbjct: 337 -----GEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPN 391

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGNGE 555
           +     L+D+  R G  + A++    M  R  SA W   + A  + GN E
Sbjct: 392 VMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSE 441



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 207/497 (41%), Gaps = 60/497 (12%)

Query: 13  ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVC 72
           A P   T     KA T   +  ++G              H H++K G+       S +V 
Sbjct: 14  ARPDAYTFPPLLKAVTAAAERGAVGD-----------AVHAHVVKFGMELNAHVASSLVL 62

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
             A  G       A+   D +        T  ++N+LI G+        +   +V++   
Sbjct: 63  MYAARG---DGAVARTLLDAW--PARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRT 117

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC------ 186
           G++P   T+  VL+AC K      G+QVH  +V  G   D+ V N LI+ Y EC      
Sbjct: 118 GVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAA 177

Query: 187 -------------------------GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
                                    G +   R +FD M ER+ VSWT++I    +    +
Sbjct: 178 WELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFR 237

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ +F EM    ++ +  TMV V++ACA+L  LE G+    Y+   G+K +  + NALV
Sbjct: 238 EALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALV 297

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY KCG++  A  +F E   R+      ++      G   EA+ +   ML     PD V
Sbjct: 298 DMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEV 357

Query: 342 TMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           T +  ++A    G +  GR     M   Y +   +  +      +ID+  + GK + A  
Sbjct: 358 TFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHF----GCLIDLLGRAGKLKEALE 413

Query: 397 IFDHMSNK-TVVSWNSLIAGLIKNGDVES---AREVFSEMPGRDHISWNTMLGGLTQENM 452
              +M  +     W +L+A    +G+ E    A E   E+   + + +  +     + N 
Sbjct: 414 TIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNR 473

Query: 453 FEEAMELFRVMLSERIK 469
           +E+   L +V++ + IK
Sbjct: 474 WEDVRRLRQVIMEKGIK 490


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/623 (35%), Positives = 356/623 (57%), Gaps = 54/623 (8%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           +++ C   +    G RV A++ +     +  +   L+ +Y KC ++  A  +F E  +RN
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 308

Query: 305 LVLCNTIMSNYVRLGLAREALAI--------------LDEMLLHGP-------RPDRVTM 343
           +V    ++S Y + G A +AL +              +D++ L  P        P+  T 
Sbjct: 309 VVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTF 368

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            + +++       + GR  H  +++   E    + ++++DMY K GK             
Sbjct: 369 ATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGK------------- 415

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                             +  AR VF  +P RD +S   ++ G  Q  + EEA+ELFR +
Sbjct: 416 ------------------IHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRL 457

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
             E +K + VT  GV +A   L ALDL K ++ ++ ++ I   + L  +L+DM+++CG+ 
Sbjct: 458 QGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNL 517

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ-GIKPDSIVFVGVLTA 582
             + ++F  M +R V +W A +   +  G G + ++LF  M  +  +KPDS+  + VL+ 
Sbjct: 518 TYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSG 577

Query: 583 CSHGGLVNQGWHLFRSMTDIH-GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           CSHGGL ++G ++F  M+     V P++ HYGC+VDLLGR+G + EA + IK MP EP  
Sbjct: 578 CSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTA 637

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            IWGSLL AC+ H NVDI  +A +++ E++P  +G +V+LSN+YASAG+W +V+ +R  M
Sbjct: 638 AIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLM 697

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            ++ + K PG SSIE++  +H F + D SHP    I   ++E++   ++ GYVPDL+ VL
Sbjct: 698 LKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVL 757

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            DVDE++K+ +L  HSEKLA++FGLI++  ++PIRV+KNLR+C DCH+FAK +SKVY RE
Sbjct: 758 HDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGRE 817

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           + +RD NRFH    G CSC D+W
Sbjct: 818 VSLRDKNRFHRIVGGKCSCEDYW 840



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 227/469 (48%), Gaps = 67/469 (14%)

Query: 125 LYVELAGFGILPDKF-TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
           L + L GF +   KF  +  +LN C    AF EG +VH  ++K  +   VF+   LI  Y
Sbjct: 232 LQMALHGFNM---KFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLY 288

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI-------- 235
            +C  + D   VFDEM ERNVVSWT++I A ++R    +A+ LFF  V+  +        
Sbjct: 289 TKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDK 348

Query: 236 -------------KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
                        +PN  T   V+++C       LG ++ + I +L  + +  + ++L+D
Sbjct: 349 LKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLD 408

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K G +  A+ +F    +R++V C  I+S Y +LGL  EAL +   +   G + + VT
Sbjct: 409 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 468

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
               ++A + L  L  G+  H +VLR+ +  +  + N++IDMY KCG    + RIFD M 
Sbjct: 469 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 528

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            +TV+SWN+++ G  K+G+            GR                   E ++LF +
Sbjct: 529 ERTVISWNAMLVGYSKHGE------------GR-------------------EVLKLFTL 557

Query: 463 MLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD--MQLATALVDMFAR 519
           M  E ++K D VT++ V S C + G  D    I+  +    I  +  M+    +VD+  R
Sbjct: 558 MREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGR 617

Query: 520 CGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN-------GEQAVEL 560
            G  + A +  ++M     +A W + +GA  +  N       G+Q +E+
Sbjct: 618 SGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEI 666



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 201/427 (47%), Gaps = 56/427 (13%)

Query: 41  NCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF---ESLTYAQKAFDYYIKDN 97
           N +   E ++ H H++K        Y+  V      +  +   +SL  A   FD   + N
Sbjct: 255 NKRAFREGQRVHAHMIKT------RYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 308

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL----------------PDKFTF 141
             S T  +     RGY+   L +    + + L G   +                P++FTF
Sbjct: 309 VVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTF 368

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             VL +CT S  F  G Q+H  I+K+ ++  VFV + L++ Y + G I + R VF+ + E
Sbjct: 369 ATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPE 428

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R+VVS T++I   A+  L +EA+ LF  +  EG+K N VT   V++A + L  L+LG +V
Sbjct: 429 RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQV 488

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
             ++    + +  ++ N+L+DMY KCG +  ++++F    +R ++  N ++  Y + G  
Sbjct: 489 HNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEG 548

Query: 322 REALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           RE L +   M      +PD VT+L+ +S  +           HG     GLE  D   N 
Sbjct: 549 REVLKLFTLMREETKVKPDSVTILAVLSGCS-----------HG-----GLE--DKGLNI 590

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS- 439
             D  M  GK E+  ++ +H        +  ++  L ++G VE A E   +MP     + 
Sbjct: 591 FND--MSSGKIEVEPKM-EH--------YGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAI 639

Query: 440 WNTMLGG 446
           W ++LG 
Sbjct: 640 WGSLLGA 646



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 33/342 (9%)

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           P     LS  +    L   L     HG+ ++   E +++I N  ++       Q +   +
Sbjct: 212 PSNSRTLSTFTTHIHLQQPLLQMALHGFNMK--FENYNAILNECVNKRAFREGQRVHAHM 269

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                  +V     LI    K   +  A  VF EMP R+ +SW  M+   +Q     +A+
Sbjct: 270 IKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQAL 329

Query: 458 ELF----RVMLSERIKVDRV-----------------TMVGVASACGYLGALDLAKWIYA 496
            LF    ++ L+    +D++                 T   V ++C       L + I++
Sbjct: 330 NLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHS 389

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
            I K      + + ++L+DM+A+ G    A  VF  + +RDV + TA I   A  G  E+
Sbjct: 390 LIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEE 449

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW----HLFRSMTDIHGVSPQIVHY 612
           A+ELF  +  +G+K + + + GVLTA S    ++ G     H+ RS      +   +V  
Sbjct: 450 ALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRS-----EIPSFVVLQ 504

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             ++D+  + G L  +  +  +M  E   + W ++L    KH
Sbjct: 505 NSLIDMYSKCGNLTYSRRIFDTM-YERTVISWNAMLVGYSKH 545


>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
          Length = 602

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/522 (40%), Positives = 313/522 (59%), Gaps = 30/522 (5%)

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQL-GDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           A A    ML     P++ T    + A A L G    G   H   L+ G      + NT+I
Sbjct: 110 AAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLI 169

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY   G                              G +  AR VF  MP    ++W+ 
Sbjct: 170 HMYSCFG-----------------------------GGFLGDARNVFDRMPKESAVTWSA 200

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           M+GG  +  +  +A+ELFR M +  ++ D VT++GV +A   LGAL+LA+W+  ++E+ G
Sbjct: 201 MIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREG 260

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
           I   + L  AL+D  A+CGD   A+ VF  M++R V +WT+ I A+AMEG G++AV +F 
Sbjct: 261 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFE 320

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           EM   G+ PD + F+GVLTACSH G+V++G   F +M   +G+ P+I HYGCMVD+ GRA
Sbjct: 321 EMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRA 380

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G++  A++ +++MP++PN VIW SL++AC+ H  +++       +    P     +++LS
Sbjct: 381 GMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLS 440

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           N++A   +W   + +R +M ++GI+K+PG S +E++G+VHEF +GDESHP+  +I  M+ 
Sbjct: 441 NVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVE 500

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           EM   LR  G++   + VLLD+DE++K+  L  HSEKLA+AF L+ T     +RVVKNLR
Sbjct: 501 EMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLR 560

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH+  K +S+VY REI+VRD +RFH F+ GSCSC DFW
Sbjct: 561 VCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 186/383 (48%), Gaps = 23/383 (6%)

Query: 104 FMYNSLIRGYSCI---GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE-GVQ 159
           F+ N+LIR ++      L + A + +  +    ++P+KFTFPF+L AC       + G+Q
Sbjct: 89  FLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQ 148

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACAR 216
            H A +K GF  D +V N LI+ Y  C   G + D R VFD M + + V+W+++I    R
Sbjct: 149 AHAAALKFGFATDQYVSNTLIHMY-SCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVR 207

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
             L  +AV LF EM   G++ + VT++ V++A   L  LEL   V  +++  G+  +  +
Sbjct: 208 GGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTL 267

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            NAL+D   KCG VD A  +F   + R++V   +++      G  +EA+ + +EM + G 
Sbjct: 268 CNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGV 327

Query: 337 RPDRVTMLSAVSASAQLG--DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
            PD V  +  ++A +  G  D  CG       +  G+E        M+DM+ + G  E A
Sbjct: 328 PPDDVAFIGVLTACSHAGMVDEGCGYF-DAMKVEYGIEPKIEHYGCMVDMFGRAGMVERA 386

Query: 395 CRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLG---G 446
                 M      V W SL++    +G +E      R +  E P   H +   ML     
Sbjct: 387 MEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPA--HEANYIMLSNVFA 444

Query: 447 LTQENMFEEAMELFRVMLSERIK 469
           LTQ   ++E  E+ R M    IK
Sbjct: 445 LTQR--WKEKSEIRREMSKRGIK 465


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/774 (31%), Positives = 409/774 (52%), Gaps = 39/774 (5%)

Query: 52  HCHILKQG-LGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLI 110
           H H++++G +G    + + V+      G    L  A++ FD   + N  S     + +L+
Sbjct: 82  HGHVVRRGGVGRLDLFCANVLLN--MYGKLGPLASARRLFDRMPERNMVS-----FVTLV 134

Query: 111 RGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFD 170
           + ++  G    A +L+  L   G   ++F    +L       A G    VH    K+G D
Sbjct: 135 QAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHD 194

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
            + FV + LI+ Y  C  + D   VF+ +  ++ V WT+++   +  D P+ A  +F +M
Sbjct: 195 HNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM 254

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
              G KPN   +  V+ A   L ++ LG  +     +        +  AL+DMY KCG +
Sbjct: 255 RVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDI 314

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
             A+  F      +++L + ++S Y +     +A  +   ++     P+  ++ S + A 
Sbjct: 315 KDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 374

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
             +  L  G+  H + ++ G E    + N ++D Y KC                      
Sbjct: 375 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN--------------------- 413

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                     D++S+ ++FS +   + +SWNT++ G +Q  + EEA+ +F  M + ++  
Sbjct: 414 ----------DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
            +VT   V  AC    ++  A  I+  IEK+  + D  +  +L+D +A+CG  + A++VF
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
           + + +RD+ +W A I   A+ G    A+ELF+ M +  ++ + I FV +L+ CS  GLVN
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            G  LF SM   HG+ P + HY C+V LLGRAG L +AL  I  +P  P+ ++W +LL++
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C  H+NV +  ++AE+I E++P+    +VLLSN+YA+AG    VA +R  M+  G+RK+P
Sbjct: 644 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 703

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G S +E+ G++H F+ G   HP+M  I++ML  +N +    GY+PD+  VL DVD+++K 
Sbjct: 704 GLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKT 763

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIV 824
            +L  HSE+LA+A+GL+ T    PIR++KNLR C DCH+   ++SK+  REIIV
Sbjct: 764 RMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/589 (23%), Positives = 257/589 (43%), Gaps = 47/589 (7%)

Query: 111 RGYSCIGLGVEAISLYVELAGFGILP-----DKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           RG++     ++   L  EL    ILP     D F     L  C        G  VHG +V
Sbjct: 29  RGFAAYAAALQW--LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVV 86

Query: 166 KMGF--DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           + G     D+F  N L+N YG+ G +   RR+FD M ERN+VS+ +L+ A A+R   + A
Sbjct: 87  RRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAA 146

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQ--NLELGDRVCAYIDELGMKANALMVNALV 281
             LF  +  EG + N   +  ++     +    L  G   CA+  +LG   NA + + L+
Sbjct: 147 AALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW--KLGHDHNAFVGSGLI 204

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           D Y  C  V  A+ +F     ++ V+   ++S Y        A  +  +M + G +P+  
Sbjct: 205 DAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPF 264

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
            + S + A+  L  ++ G+  HG  ++   +    +   ++DMY KC             
Sbjct: 265 ALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKC------------- 311

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                             GD++ AR  F  +P  D I  + M+    Q N  E+A ELF 
Sbjct: 312 ------------------GDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFL 353

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            ++   +  +  ++  V  AC  +  LD  K I+ +  K G   D+ +  AL+D +A+C 
Sbjct: 354 RLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN 413

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
           D   ++++F  +   +  +W   +   +  G GE+A+ +F EM    +    + +  VL 
Sbjct: 414 DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLR 473

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           AC+    +     +  S+ +    +   V    ++D   + G + +AL + + + +E + 
Sbjct: 474 ACASTASIRHAGQIHCSI-EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDI 531

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV-HVLLSNIYASAG 689
           + W ++++    H     A    +R+ + + E + +  V L ++ +S G
Sbjct: 532 ISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTG 580


>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/615 (37%), Positives = 356/615 (57%), Gaps = 18/615 (2%)

Query: 245 VISACAKLQNLELGDRV--CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           ++  CA+   +  G+++   A +  L    ++ ++NAL+ +Y  C     A++LF     
Sbjct: 18  LLRQCARASAVRPGEQLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLFDRIPH 77

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
            +    +   +  +R     +AL    +M       D V ++ A+ A ++LGD       
Sbjct: 78  SHKD--SVDYTALIRCSHPLDALRFYLQMRQRALPLDGVALICALGACSKLGDSNLVPQM 135

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H  V++ G      + N ++D Y+KCG    A R+F+ +   +VVSW  ++ G++K   V
Sbjct: 136 HVGVVKFGFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKCEGV 195

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML---SERIKVDRVTMVGVA 479
           ES + VF EMP R+ ++W  ++ G       +EA  L + M+        ++ +T+  V 
Sbjct: 196 ESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVL 255

Query: 480 SACGYLGALDLAKWIYAY-IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
           SAC   G + + +W++ Y ++  G    + + T+LVDM+A+CG    A+ VFR M +R+V
Sbjct: 256 SACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMPRRNV 315

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            AW A +  +AM G G+  VE+F  M+ + +KPD++ F+ +L++CSH GLV QGW  F  
Sbjct: 316 VAWNAMLCGLAMHGMGKVVVEMFACMVEE-VKPDAVTFMALLSSCSHSGLVEQGWQYFHD 374

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           +   +G+ P+I HY CMVDLLGRAG L EA DL+K +P+ PN+V+ GSLL AC  H  + 
Sbjct: 375 LERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPPNEVVLGSLLGACYAHGKLR 434

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +       + ++DP  +  H+LLSN+YA  GK      +R  +K +GIRK+PG SSI V+
Sbjct: 435 LGEKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRKVLKNRGIRKVPGMSSIYVD 494

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL-------DVDE--QEK 769
           G++H F +GD+SHP   +I   L +M C+LR AGYVP+    +L       D  E  +E 
Sbjct: 495 GQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAGYVPNTNCQVLFGCSNGDDCMEAFEEV 554

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           + +L  HSEKLA+ FGL+ST  + P+ + KNLR+C DCHS  K+ S +Y REI+VRD  R
Sbjct: 555 EQVLFTHSEKLALCFGLMSTPSSSPLCIFKNLRICQDCHSAIKIASDIYKREIVVRDRYR 614

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+QGSCSCSD+W
Sbjct: 615 FHSFKQGSCSCSDYW 629



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 198/437 (45%), Gaps = 80/437 (18%)

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMG--FDRDVFVENCLINFYGECGDIVDGRRVF 196
             F  +L  C ++SA   G Q+H A    G  F    F+ N L++ Y  C      R++F
Sbjct: 13  LIFRSLLRQCARASAVRPGEQLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLF 72

Query: 197 DEM--SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           D +  S ++ V +T+LI    R   P +A+  + +M +  +  + V ++C + AC+KL +
Sbjct: 73  DRIPHSHKDSVDYTALI----RCSHPLDALRFYLQMRQRALPLDGVALICALGACSKLGD 128

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCG-------------------------- 288
             L  ++   + + G   +  ++N ++D Y+KCG                          
Sbjct: 129 SNLVPQMHVGVVKFGFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEG 188

Query: 289 -----AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL---HGPRPDR 340
                 V++ K +F E  +RN V    ++  YV  G  +EA  +L EM+     G   + 
Sbjct: 189 VVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNS 248

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD---SICNTMIDMYMKCGKQEMACRI 397
           +T+ S +SA +Q GD+  GR  H Y ++    GWD    +  +++DMY KCG+   A  +
Sbjct: 249 ITLCSVLSACSQSGDVSVGRWVHCYAVKA--VGWDLGVMVGTSLVDMYAKCGRISAALMV 306

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F HM  + VV+WN+++ GL  +G                               M +  +
Sbjct: 307 FRHMPRRNVVAWNAMLCGLAMHG-------------------------------MGKVVV 335

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDM 516
           E+F  M+ E +K D VT + + S+C + G ++     +  +E+  GI  +++    +VD+
Sbjct: 336 EMFACMV-EEVKPDAVTFMALLSSCSHSGLVEQGWQYFHDLERAYGIRPEIEHYACMVDL 394

Query: 517 FARCGDPQRAMQVFRRM 533
             R G  + A  + +++
Sbjct: 395 LGRAGRLEEAEDLVKKL 411



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 177/399 (44%), Gaps = 57/399 (14%)

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
           ++A+K FD     ++ S     Y +LIR        ++A+  Y+++    +  D      
Sbjct: 66  SHARKLFDRIPHSHKDSVD---YTALIR----CSHPLDALRFYLQMRQRALPLDGVALIC 118

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
            L AC+K        Q+H  +VK GF R   V N +++ Y +CG + + RRVF+E+ E +
Sbjct: 119 ALGACSKLGDSNLVPQMHVGVVKFGFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEPS 178

Query: 204 VVSWTSLICACAR-----------RDLP--------------------KEAVYLFFEMV- 231
           VVSWT ++    +            ++P                    KEA  L  EMV 
Sbjct: 179 VVSWTVVLEGVVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVF 238

Query: 232 --EEGIKPNSVTMVCVISACAKLQNLELGDRV-CAYIDELGMKANALMVNALVDMYMKCG 288
               G   NS+T+  V+SAC++  ++ +G  V C  +  +G     ++  +LVDMY KCG
Sbjct: 239 GCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCG 298

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +  A  +F     RN+V  N ++      G+ +  + +   M +   +PD VT ++ +S
Sbjct: 299 RISAALMVFRHMPRRNVVAWNAMLCGLAMHGMGKVVVEMFACM-VEEVKPDAVTFMALLS 357

Query: 349 ASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM-- 401
           + +  G +  G      +   Y +R  +E +      M+D+  + G+ E A  +   +  
Sbjct: 358 SCSHSGLVEQGWQYFHDLERAYGIRPEIEHY----ACMVDLLGRAGRLEEAEDLVKKLPI 413

Query: 402 -SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
             N+ V+   SL+     +G +    ++  E+   D ++
Sbjct: 414 PPNEVVL--GSLLGACYAHGKLRLGEKIMRELVQMDPLN 450


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/614 (37%), Positives = 347/614 (56%), Gaps = 37/614 (6%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P   T   +I +CA+  +L  G  V   + + G   +  +   L++MY + G++D A ++
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT----MLSAVSASAQ 352
           F E ++R + + N +      +G  +E L +  +M   G   DR T    + + V +   
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           +  L  G+  H ++LR+G E    +  T++D+Y K G                       
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFG----------------------- 232

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-- 470
                    V  A  VF  MP ++ +SW+ M+    +  M  +A+ELF++M+ E      
Sbjct: 233 --------SVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVP 284

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           + VTMV +  AC  L AL+  K I+ YI +  +   + +  AL+ M+ RCG+     +VF
Sbjct: 285 NSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVF 344

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
             M+KRDV +W + I    M G G++A+++F  M+ QG+ P  I F+ VL ACSH GLV 
Sbjct: 345 DNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVE 404

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G  LF SM   + + P + HY CMVDLLGRA  LGEA+ LI+ M  EP   +WGSLL +
Sbjct: 405 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGS 464

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H NV++A  A+  + EL+P  +G +VLL++IYA A  W+    V   ++ +G++KLP
Sbjct: 465 CRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLP 524

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G S IEV  KV+ F S DE +P++  I ++L +++  ++  GYVP    VL D+DE+EK+
Sbjct: 525 GCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKE 584

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
            ++  HSEKLA+AFGLI+T+K   IR+ KNLRLC DCH+  K +SK  +REI+VRD NRF
Sbjct: 585 RIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRF 644

Query: 831 HFFRQGSCSCSDFW 844
           H FR G CSC D+W
Sbjct: 645 HHFRDGVCSCGDYW 658



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 176/341 (51%), Gaps = 10/341 (2%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P + TF  ++ +C + ++   G+ VH  +V  GFD+D F+   LIN Y E G I    +V
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA----K 251
           FDE  ER +  W +L  A A     KE + L+ +M   G   +  T   V+ AC      
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +  L  G  + A+I   G +AN  ++  L+D+Y K G+V  A  +F     +N V  + +
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 312 MSNYVRLGLAREALAILDEMLLHG--PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++ + +  +  +AL +   M+       P+ VTM++ + A A L  L  G++ HGY+LR 
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR 315

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            L+    + N +I MY +CG+  M  R+FD+M  + VVSWNSLI+    +G  + A ++F
Sbjct: 316 QLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 430 SEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
             M  +     +IS+ T+LG  +   + EE   LF  MLS+
Sbjct: 376 ENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSK 416



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 209/424 (49%), Gaps = 27/424 (6%)

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
           ++  G    P   +K++    ++G   S+  A K FD          T++++N+L R  +
Sbjct: 104 LVDSGFDQDPFLATKLINMYYELG---SIDRALKVFD-----ETRERTIYVWNALFRALA 155

Query: 115 CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS----AFGEGVQVHGAIVKMGFD 170
            +G G E + LY+++   G   D+FT+ +VL AC  S        +G ++H  I++ G++
Sbjct: 156 MVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYE 215

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
            ++ V   L++ Y + G +     VF  M  +N VSW+++I   A+ ++P +A+ LF  M
Sbjct: 216 ANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLM 275

Query: 231 VEEGIK--PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           + E     PNSVTMV ++ ACA L  LE G  +  YI    + +   ++NAL+ MY +CG
Sbjct: 276 MFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCG 335

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            V   +++F   K R++V  N+++S Y   G  ++A+ I + M+  G  P  ++ ++ + 
Sbjct: 336 EVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLG 395

Query: 349 ASAQL-----GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           A +       G +L   M   Y +  G+E +      M+D+  +  +   A ++ + M  
Sbjct: 396 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYA----CMVDLLGRANRLGEAIKLIEDMHF 451

Query: 404 KT-VVSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
           +     W SL+     + +V   E A  V  E+  R+  ++  +     +  ++ EA  +
Sbjct: 452 EPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSV 511

Query: 460 FRVM 463
            +++
Sbjct: 512 MKLL 515



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 124/244 (50%), Gaps = 17/244 (6%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L + K+ H HIL+ G       ++ ++   A+ G   S++YA   F      N  S    
Sbjct: 199 LRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFG---SVSYANSVFCAMPTKNFVS---- 251

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGF---GILPDKFTFPFVLNACTKSSAFGEGVQVH 161
            ++++I  ++   + ++A+ L+ +L  F     +P+  T   +L AC   +A  +G  +H
Sbjct: 252 -WSAMIACFAKNEMPMKALELF-QLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIH 309

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G I++   D  + V N LI  YG CG+++ G+RVFD M +R+VVSW SLI         K
Sbjct: 310 GYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGK 369

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG-----DRVCAYIDELGMKANALM 276
           +A+ +F  M+ +G+ P+ ++ + V+ AC+    +E G       +  Y    GM+  A M
Sbjct: 370 KAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 429

Query: 277 VNAL 280
           V+ L
Sbjct: 430 VDLL 433



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 45/353 (12%)

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N ++ +  + G  ++AL     +L   P P + T    + + AQ   L  G   H  ++ 
Sbjct: 51  NQLIQSLCKGGNLKQAL----HLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVD 106

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
           +G +    +   +I+MY + G  + A ++FD    +T+  WN+L   L   G  +   ++
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDL 166

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           + +M      +W   +G  T  + F     L   ++SE             S C     L
Sbjct: 167 YIQM------NW---IG--TPSDRFTYTYVLKACVVSE------------LSVC----PL 199

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
              K I+A+I ++G   ++ + T L+D++A+ G    A  VF  M  ++  +W+A I   
Sbjct: 200 RKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACF 259

Query: 549 AMEGNGEQAVELFNEMLRQGIK--PDSIVFVGVLTACSHGGLVNQG--WHLFRSMTDIHG 604
           A      +A+ELF  M+ +     P+S+  V +L AC+    + QG   H +     +  
Sbjct: 260 AKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDS 319

Query: 605 VSPQIVHYGCMVDLLGRAG--LLGE-ALDLIKSMPVEPNDVIWGSLLAACQKH 654
           + P +     ++ + GR G  L+G+   D +K   V    V W SL++    H
Sbjct: 320 ILPVL---NALITMYGRCGEVLMGQRVFDNMKKRDV----VSWNSLISIYGMH 365


>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
          Length = 584

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/526 (42%), Positives = 323/526 (61%), Gaps = 5/526 (0%)

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL-EGWDSICNTMI 382
           AL + D +L  G  PD      A ++ A+  D       H +  + GL      +   ++
Sbjct: 59  ALRLFDHLLRSGADPDPAAYELAFASCARARDRATAAQLHAHAAKRGLVASHRRVRCRLV 118

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG-DVESAREVFSEMPGRDHISWN 441
             Y  CG    A R+FD  ++  +V+WN L+ G  + G D +  R+ F+ MP RD +SWN
Sbjct: 119 HAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSRDSVSWN 178

Query: 442 TMLGGLTQENMFEEAMELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           T+L        ++EA+ +FR ML S+  + DRVT+V V SA  YLGAL    W +AY+ +
Sbjct: 179 TVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGLWAHAYVFR 238

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVE 559
             I  + +L++AL++M+++CG  + A+ VF  +  KR +  W A +      G  E+A+E
Sbjct: 239 KCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANGYSERALE 298

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF  M    + P+ I F  VL ACSHGGLV +G   F+ M+  +G+ P I HYGCMVDL 
Sbjct: 299 LFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCMVDLF 358

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            RAG+  +A ++I++MP+EP+  +  +LL AC+ H+N+++      R+ E        +V
Sbjct: 359 CRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAANDHAGYV 418

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSNIYA  G W  V +VR  M ++G+ K PGSSS+E+NG +HEF SGD+SH    +I  
Sbjct: 419 LLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHSRKRDIYK 478

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
           ML E+  +L+ +GY PD + VLLD+D+++ K+  L+ HSEKLA+AFGLIST+   PIRVV
Sbjct: 479 MLGEICQQLKSSGYTPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRVV 538

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            NLR+C DCH+  KL+SK+Y R IIVRD NRFH FR+GSCSC D+W
Sbjct: 539 NNLRICGDCHNAIKLISKIYGRCIIVRDANRFHHFRKGSCSCGDYW 584



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 12/242 (4%)

Query: 168 GFDRDVFVENCLINFYG-ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
           G D D+   NCL+  Y  E GD    R  F  M  R+ VSW +++  C       EA+ +
Sbjct: 137 GTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSRDSVSWNTVLSWCVVNGEYDEAIAV 196

Query: 227 FFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           F EM+  +  +P+ VT+V V+SA A L  L  G    AY+    ++    + +AL++MY 
Sbjct: 197 FREMLASQECQPDRVTLVSVVSAIAYLGALAHGLWAHAYVFRKCIEVEEKLSSALINMYS 256

Query: 286 KCGAVDTAKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
           KCG ++ A  +F      R+L   N +++ +   G +  AL +   M      P+++T  
Sbjct: 257 KCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANGYSERALELFTRMESTRLMPNKITFN 316

Query: 345 SAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           + ++A +  G +  G     RM   Y    G+E   +    M+D++ + G  E A  I  
Sbjct: 317 TVLNACSHGGLVEEGMKYFQRMSRFY----GIEPDIAHYGCMVDLFCRAGMFEKAEEIIQ 372

Query: 400 HM 401
            M
Sbjct: 373 TM 374



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 44/283 (15%)

Query: 50  QPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           Q H H  K+GL      +  ++V   A  G    L +A++ FD       T   +  +N 
Sbjct: 96  QLHAHAAKRGLVASHRRVRCRLVHAYAVCGM---LPHARRVFD-----GGTDNDMVAWNC 147

Query: 109 LIRGYS------------------------------CI--GLGVEAISLYVE-LAGFGIL 135
           L+RGY+                              C+  G   EAI+++ E LA     
Sbjct: 148 LLRGYAQEGGDEDLLRDFFARMPSRDSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQ 207

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD+ T   V++A     A   G+  H  + +   + +  + + LIN Y +CG I     V
Sbjct: 208 PDRVTLVSVVSAIAYLGALAHGLWAHAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYV 267

Query: 196 FDEM-SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           FD +  +R++ +W +++         + A+ LF  M    + PN +T   V++AC+    
Sbjct: 268 FDNVGGKRSLDTWNAMLAGFTANGYSERALELFTRMESTRLMPNKITFNTVLNACSHGGL 327

Query: 255 LELGDRVCAYIDEL-GMKANALMVNALVDMYMKCGAVDTAKQL 296
           +E G +    +    G++ +      +VD++ + G  + A+++
Sbjct: 328 VEEGMKYFQRMSRFYGIEPDIAHYGCMVDLFCRAGMFEKAEEI 370



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 36/171 (21%)

Query: 93  YIKDNETSA-TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
           Y+ DN     +L  +N+++ G++  G    A+ L+  +    ++P+K TF  VLNAC+  
Sbjct: 266 YVFDNVGGKRSLDTWNAMLAGFTANGYSERALELFTRMESTRLMPNKITFNTVLNACSHG 325

Query: 152 SAFGEGVQVHGAIVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
               EG++    + +  G + D+    C+++ +   G       +   M           
Sbjct: 326 GLVEEGMKYFQRMSRFYGIEPDIAHYGCMVDLFCRAGMFEKAEEIIQTMP---------- 375

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
                                   ++P++  +  ++ AC   +NLELG +V
Sbjct: 376 ------------------------MEPDASMLKALLGACRTHKNLELGKKV 402


>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
 gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
          Length = 719

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/661 (35%), Positives = 357/661 (54%), Gaps = 42/661 (6%)

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
           PK ++   F      I P + T    IS     + +    ++ A I    + +++L+   
Sbjct: 65  PKSSLSALF------IPPTTPTEAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQ 118

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           L+       +++ +  +F   K +NL   N ++           A+     ML  G +PD
Sbjct: 119 LISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPD 178

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK------------ 387
           R+T    + + A L     G   H  +LR G+E    +  +++DMY+K            
Sbjct: 179 RLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFD 238

Query: 388 ------------------------CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
                                    G  + A ++F  M  K  VSW++LI G  KNGD++
Sbjct: 239 ESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMD 298

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
            A E+F +MP ++ +SW TM+ G ++    E+A+ +F  ML E ++ +  T+V   SAC 
Sbjct: 299 RAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACA 358

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
            +G L+    I+ YI+ NG+H    L TALVDM+A+CG+ + A +VF   E++ +  WT 
Sbjct: 359 KIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTV 418

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I   A+ G+ EQA+  F +M+  GIKPD +VF+ +LTAC H G V+ G + F SM   +
Sbjct: 419 MIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDY 478

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA 663
            + P + HY  +VD+LGR+G L EAL  I+ MP+ P+ VIWG+L  AC+ H+   +A +A
Sbjct: 479 CIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFA 538

Query: 664 AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHE 723
             ++ +L+P  +G ++ LSN YA+ G+W +  RVR+ M+ +G+ K  G S IEV G+VH 
Sbjct: 539 LNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHR 598

Query: 724 FTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMA 783
           F SGD  H +   I   L E+       GY+P    VL +++++EK+ +L  H EKLA+A
Sbjct: 599 FVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALA 658

Query: 784 FGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           F LI TS  M IR+VKNL++C DCHS  K  SK+  REI++RD  RFH F+ GSCSC D 
Sbjct: 659 FALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDH 718

Query: 844 W 844
           W
Sbjct: 719 W 719



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 248/577 (42%), Gaps = 95/577 (16%)

Query: 7   PSPLVLATPTVTTLTNQHKAK----------TTPKDSPSIGSLKNCKTLNELKQPHCHIL 56
           PSP      T  + T+++K K          TTP ++  I  +   KT+ +L Q H  I+
Sbjct: 46  PSPNPPEITTTISKTSENKPKSSLSALFIPPTTPTEAHFISLIHGSKTILQLHQIHAQII 105

Query: 57  KQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCI 116
              L       ++++ + +     +S+ ++   F+++   N     LF +N+LIRG +  
Sbjct: 106 IHNLSSSSLITTQLISSSSLR---KSINHSLAVFNHHKPKN-----LFTFNALIRGLTTN 157

Query: 117 GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE 176
                AI  +  +   GI PD+ T+PFVL +     +   G+ +H  I++ G + D FV 
Sbjct: 158 SHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVR 217

Query: 177 NCLINFYGECGDIVDGRRVFDEMSER-----NVVSWTSLICACARRDLPKEAVYLFFEMV 231
             L++ Y +   +    +VFDE  ER     + + W  LI  C +    K+AV LF    
Sbjct: 218 VSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLF---- 273

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
                           A  K +N+                      + L+D + K G +D
Sbjct: 274 ---------------KAMPKKENVSW--------------------STLIDGFAKNGDMD 298

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A +LF +  ++N+V   T++  + R G + +AL++  +ML  G RP+  T++SA+SA A
Sbjct: 299 RAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACA 358

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
           ++G L  G   H Y+  NGL   +++   ++DMY KCG  E A  +F     K++ +W  
Sbjct: 359 KIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTV 418

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           +I G   +G  E A   F +M          M  G                     IK D
Sbjct: 419 MIWGWAIHGHSEQAIACFKQM----------MFAG---------------------IKPD 447

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQVF 530
            V  + + +AC + G +D+    +  +  +  I   M+  T +VDM  R G  + A++  
Sbjct: 448 EVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFI 507

Query: 531 RRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
            RM    D   W A   A       + A    N++L+
Sbjct: 508 ERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLK 544


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/607 (37%), Positives = 353/607 (58%), Gaps = 36/607 (5%)

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
           G+  +S T   +I  C   + +  G+ +C ++   G +    +VN L++MY+K   ++ A
Sbjct: 8   GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
            QLF +   RN++   T++S Y +  + ++AL +L  ML  G RP+  T  S + A   +
Sbjct: 68  HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGM 127

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
            D+   RM H  +++ GLE          D+Y++                      ++LI
Sbjct: 128 SDV---RMLHCGIIKEGLES---------DVYVR----------------------SALI 153

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
               K G+ E A  VF EM   D I WN+++GG  Q +  + A+ELF+ M       ++ 
Sbjct: 154 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 213

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           T+  V  AC  L  L+L    + +I K     D+ L  ALVDM+ +CG  + A +VF +M
Sbjct: 214 TLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQM 271

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
           ++RDV  W+  I  +A  G  ++A++LF  M   G KP+ I  VGVL ACSH GL+  GW
Sbjct: 272 KERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGW 331

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
           + FRSM  ++G++P   HYGCM+DLLG+AG L +A+ L+  M  EP+ V W +LL AC+ 
Sbjct: 332 YYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRV 391

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
            +N+ +A YAA+++  LDPE +G + +LSNIYA++ KW +V  +R +M++ GI+K PG S
Sbjct: 392 QRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCS 451

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
            IEVN ++H F  GDESHP++  ++  L ++  RL   GYVP+   VL D++ ++ +  L
Sbjct: 452 WIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSL 511

Query: 774 SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
            HHSEKLA+AFGL++      IR+ KNLR+C DCH F KL SK+ +R I++RD  R+H F
Sbjct: 512 RHHSEKLALAFGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHF 571

Query: 834 RQGSCSC 840
           + G CSC
Sbjct: 572 QDGKCSC 578



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 210/430 (48%), Gaps = 44/430 (10%)

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
           L   G+  D  T+  ++  C    A  EG  +   +   G    +F+ N LIN Y +   
Sbjct: 4   LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + D  ++FD+M +RNV+SWT++I A ++  + ++A+ L   M+ +G++PN  T   V+ A
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C  + ++ +    C  I E G++++  + +AL+D++ K G  + A  +F E    + ++ 
Sbjct: 124 CNGMSDVRMLH--CGIIKE-GLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           N+I+  + +   +  AL +   M   G   ++ T+ S + A   L  L  G   H ++++
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 240

Query: 369 NGLEGWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
                +D    + N ++DMY KCG  E A R+F+ M  + V++W+++I+GL +NG     
Sbjct: 241 -----YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNG----- 290

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                       +EA++LF +M S   K + +T+VGV  AC + 
Sbjct: 291 --------------------------YSQEALKLFELMKSSGTKPNYITIVGVLFACSHA 324

Query: 486 GALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTA 543
           G L+   + +  ++K  GI+   +    ++D+  + G    A+++   ME + D   W  
Sbjct: 325 GLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 384

Query: 544 AIGAMAMEGN 553
            +GA  ++ N
Sbjct: 385 LLGACRVQRN 394



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 172/342 (50%), Gaps = 20/342 (5%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  L  A + FD   + N  S T     ++I  YS   +  +A+ L V +   G+ P+ +
Sbjct: 61  FNLLNDAHQLFDQMPQRNVISWT-----TMISAYSKCKIHQKALELLVLMLRDGVRPNVY 115

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  VL AC   +   +   +H  I+K G + DV+V + LI+ + + G+  D   VFDEM
Sbjct: 116 TYSSVLRAC---NGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEM 172

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              + + W S+I   A+      A+ LF  M   G      T+  V+ AC  L  LELG 
Sbjct: 173 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG- 231

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            + A++  +    + ++ NALVDMY KCG+++ A+++F + K+R+++  +T++S   + G
Sbjct: 232 -MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNG 290

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGW 374
            ++EAL + + M   G +P+ +T++  + A +  G L  G      M   Y +  G E +
Sbjct: 291 YSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHY 350

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
                 MID+  K GK + A ++ + M      V+W +L+  
Sbjct: 351 ----GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 11/262 (4%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+ C  +++++  HC I+K+GL       S V    A +  F  L   + A   +  D  
Sbjct: 121 LRACNGMSDVRMLHCGIIKEGLE------SDVYVRSALIDVFAKLGEPEDALSVF--DEM 172

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            +    ++NS+I G++       A+ L+  +   G + ++ T   VL ACT  +    G+
Sbjct: 173 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 232

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q H  IVK  +D+D+ + N L++ Y +CG + D RRVF++M ER+V++W+++I   A+  
Sbjct: 233 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNG 290

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMV 277
             +EA+ LF  M   G KPN +T+V V+ AC+    LE G      + +L G+       
Sbjct: 291 YSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHY 350

Query: 278 NALVDMYMKCGAVDTAKQLFGE 299
             ++D+  K G +D A +L  E
Sbjct: 351 GCMIDLLGKAGKLDDAVKLLNE 372


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/757 (32%), Positives = 420/757 (55%), Gaps = 43/757 (5%)

Query: 96   DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            D+  + T+   N L+ G +    G EA  ++ E+    +  +  ++  +L+A T+ S   
Sbjct: 312  DDRNAVTM---NGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLK 367

Query: 156  EG----VQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
            EG     +VH  +++    D  + + N L+N Y +C  I + R +F  M  ++ VSW S+
Sbjct: 368  EGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSI 427

Query: 211  ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
            I      +  +EAV  F  M   G+ P+  +++  +S+CA L  + LG ++     + G+
Sbjct: 428  ISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGL 487

Query: 271  KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY-VRLGLAREALAILD 329
              +  + NAL+ +Y +   ++  +++F    + + V  N+ +           +A+    
Sbjct: 488  DLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFL 547

Query: 330  EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
            EM+  G +P+RVT ++ +SA + L  L  GR  H  +L++ +   ++I NT++  Y KC 
Sbjct: 548  EMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCE 607

Query: 390  KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
            + E    IF  MS +                              RD +SWN M+ G   
Sbjct: 608  QMEDCEIIFSRMSER------------------------------RDEVSWNAMISGYIH 637

Query: 450  ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQL 509
              +  +AM L  +M+ +  ++D  T+  V SAC  +  L+    ++A   +  +  ++ +
Sbjct: 638  NGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVV 697

Query: 510  ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
             +ALVDM+A+CG    A + F  M  R++ +W + I   A  G+G +A++LF +M + G 
Sbjct: 698  GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQ 757

Query: 570  KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
             PD + FVGVL+ACSH GLV++G+  F+SM +++ ++P+I H+ CMVDLLGRAG + +  
Sbjct: 758  LPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLE 817

Query: 630  DLIKSMPVEPNDVIWGSLLAAC--QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
            + IK+MP+ PN +IW ++L AC     +N ++   AA+ + EL+P  +  +VLLSN++A+
Sbjct: 818  EFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAA 877

Query: 688  AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
             GKW +V   RL M+   ++K  G S + +   VH F +GD++HPE   I   L+E+  +
Sbjct: 878  GGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNK 937

Query: 748  LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
            +RD GYVP+    L D++ + K+ LLS+HSEKLA+AF L   S+ +PIR++KNLR+C DC
Sbjct: 938  MRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRQSE-LPIRIIKNLRVCGDC 996

Query: 808  HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            H+  K +S + +R+II+RD+NRFH F  G CSC D+W
Sbjct: 997  HTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/586 (26%), Positives = 268/586 (45%), Gaps = 53/586 (9%)

Query: 8   SPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYI 67
           + L L+   +    + H     P  +      ++  T+ +  Q H  I K GL     + 
Sbjct: 18  TQLALSEQLLHHCNSSHHHLHFPPLNLDYNRYRDSCTVEDAHQLHLQIYKTGLTSDVFWC 77

Query: 68  SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
           + +V    + G   +L  AQK FD   + N     L  ++ L+ GY+  G+  EA  L+ 
Sbjct: 78  NTLVNIFVRAG---NLVSAQKLFDEMPQKN-----LVSWSCLVSGYAQNGMPDEACMLFR 129

Query: 128 ELAGFGILPDKFTFPFVLNACTK--SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
            +   G+LP+ +     L AC +   +    G+++HG I K  +  D+ + N L++ Y  
Sbjct: 130 GIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSH 189

Query: 186 C-GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI----KPNSV 240
           C   I D RRVF+E+  +   SW S+I    RR     A  LF  M  E      +PN  
Sbjct: 190 CSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEY 249

Query: 241 TMVCVISACAKLQN--LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           T   +++    L +  L L +++ A I++     +  + +ALV  + + G +D+AK +F 
Sbjct: 250 TFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFE 309

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEM--LLHGPRPDRVTMLSAVSASAQLGD- 355
           +  DRN V  N +M    R     EA  I  EM  L+         +LSA +  + L + 
Sbjct: 310 QMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEG 369

Query: 356 LLCGRMCHGYVLRNGL-EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
              G+  H Y++RN L + W  I N ++++Y KC                          
Sbjct: 370 KRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNA------------------------ 405

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
                  +++AR +F  MP +D +SWN+++ GL     FEEA+  F  M    +   + +
Sbjct: 406 -------IDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFS 458

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           ++   S+C  LG + L + I+    K G+  D+ ++ AL+ ++A     +   +VF  M 
Sbjct: 459 VISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP 518

Query: 535 KRDVSAWTAAIGAMAM-EGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           + D  +W + IGA+A  E +  QA++ F EM++ G KP+ + F+ +
Sbjct: 519 EYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 203/429 (47%), Gaps = 44/429 (10%)

Query: 29  TPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
            P     I +L +C +L  +   +Q H   +K GL    S  + ++   A+    E    
Sbjct: 453 VPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEY-- 510

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV-EAISLYVELAGFGILPDKFTFPFV 144
            QK F    + ++ S     +NS I   +     V +AI  ++E+   G  P++ TF  +
Sbjct: 511 -QKVFFLMPEYDQVS-----WNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-N 203
           L+A +  S    G Q+H  I+K     D  +EN L+ FYG+C  + D   +F  MSER +
Sbjct: 565 LSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRD 624

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
            VSW ++I       +  +A+ L + M+++G + +  T+  V+SACA +  LE G  V A
Sbjct: 625 EVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHA 684

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
                 ++A  ++ +ALVDMY KCG +D A + F     RN+   N+++S Y R G   +
Sbjct: 685 CAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGK 744

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +  +M  HG  PD VT +  +SA + +G           ++  G E + S    M +
Sbjct: 745 ALKLFTQMKQHGQLPDHVTFVGVLSACSHVG-----------LVDEGFEHFKS----MGE 789

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP-GRDHISWNT 442
           +Y      E+A RI +H S         ++  L + GDV+   E    MP   + + W T
Sbjct: 790 VY------ELAPRI-EHFS--------CMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRT 834

Query: 443 MLGGLTQEN 451
           +LG   + N
Sbjct: 835 ILGACCRAN 843



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 15/288 (5%)

Query: 407 VSW-NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V W N+L+   ++ G++ SA+++F EMP ++ +SW+ ++ G  Q  M +EA  LFR ++S
Sbjct: 74  VFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIIS 133

Query: 466 ERIKVDRVTMVGVASACGYLGA--LDLAKWIYAYIEKNGIHCDMQLATALVDMFARC-GD 522
             +  +   +     AC  LG   L L   I+  I K+    DM L+  L+ M++ C   
Sbjct: 134 AGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSAS 193

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI----KPDSIVFVG 578
              A +VF  ++ +  ++W + I      G+   A +LF+ M R+      +P+   F  
Sbjct: 194 IDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCS 253

Query: 579 VLT-ACSHGGLVNQGWHLFRSM---TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
           ++T ACS   LV+ G  L   M    +       +     +V    R GL+  A  + + 
Sbjct: 254 LVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQ 310

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           M       + G ++   ++HQ  + A    E    ++   S   VLLS
Sbjct: 311 MDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLS 358


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/642 (35%), Positives = 355/642 (55%), Gaps = 43/642 (6%)

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W   +   A + L  E++ L+  M+  G  P++ +   ++ +CA L     G ++  ++ 
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGE-CKDRNLVLC-NTIMSNYVRLGLAREA 324
           + G +    ++ AL+ MY KCG V  A+++F E  +   L +C N ++S Y       +A
Sbjct: 81  KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
             +   M   G   D VTML  V        L  GR  HG  ++ GL+   ++ N+ I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           YMKCG                                VE+ R +F EMP +  I+WN ++
Sbjct: 201 YMKCG-------------------------------SVEAGRRLFDEMPVKGLITWNAVI 229

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
            G +Q  +  + +EL+  M S  +  D  T+V V S+C +LGA  +   +   +E NG  
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            ++ ++ A + M+ARCG+  +A  VF  M  + + +WTA IG   M G GE  + LF++M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
           +++GI+PD  VFV VL+ACSH GL ++G  LFR+M   + + P   HY C+VDLLGRAG 
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA++ I+SMPVEP+  +WG+LL AC+ H+NVD+A  A  ++ E +P   G +VL+SNI
Sbjct: 410 LDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNI 469

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           Y+ +     + R+R+ M+E+  RK PG S +E  G+VH F +GD SH +   +  ML E+
Sbjct: 470 YSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529

Query: 745 NCRLRD-AGYVPDLTNVLLDVDE-QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
              + + AG         +D D  +E       HSE+LA+AFG++++     I V+KNLR
Sbjct: 530 ETSVMELAGN--------MDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLR 581

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH F K VSK+ DR+ +VRD +RFH+F+ G CSC D+W
Sbjct: 582 VCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 221/475 (46%), Gaps = 37/475 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N  +R  +   L  E+ISLY  +   G  PD F+FPF+L +C   S    G Q+H  + 
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDE--MSERNVVSWTSLICACARRDLPKEA 223
           K G + + FV   LI+ Y +CG + D R+VF+E   S +  V + +LI          +A
Sbjct: 81  KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            Y+F  M E G+  +SVTM+ ++  C   + L LG  +     + G+ +   ++N+ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           YMKCG+V+  ++LF E   + L+  N ++S Y + GLA + L + ++M   G  PD  T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S +S+ A LG    G      V  NG      + N  I MY +CG    A  +FD M  
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K++VSW +                               M+G      M E  + LF  M
Sbjct: 321 KSLVSWTA-------------------------------MIGCYGMHGMGEIGLMLFDDM 349

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGD 522
           +   I+ D    V V SAC + G  D    ++  +++   +    +  + LVD+  R G 
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
              AM+    M  + D + W A +GA  +  N + A   F +++    +P++I +
Sbjct: 410 LDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGY 462



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 223/472 (47%), Gaps = 31/472 (6%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLN---ELKQPHCHILKQGLGHKPSYIS 68
           L + +++   +  ++ ++P        LK+C +L+     +Q HCH+ K G   +P  ++
Sbjct: 33  LFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLT 92

Query: 69  KVV---CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
            ++   C C  +        A+K F+   ++ ++S     YN+LI GY+      +A  +
Sbjct: 93  ALISMYCKCGLVAD------ARKVFE---ENPQSSQLSVCYNALISGYTANSKVTDAAYM 143

Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
           +  +   G+  D  T   ++  CT       G  +HG  VK G D +V V N  I  Y +
Sbjct: 144 FRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMK 203

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
           CG +  GRR+FDEM  + +++W ++I   ++  L  + + L+ +M   G+ P+  T+V V
Sbjct: 204 CGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSV 263

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           +S+CA L   ++G  V   ++  G   N  + NA + MY +CG +  A+ +F     ++L
Sbjct: 264 LSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSL 323

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR---VTMLSAVSASA--QLGDLLCGR 360
           V    ++  Y   G+    L + D+M+  G RPD    V +LSA S S     G  L   
Sbjct: 324 VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRA 383

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKN 419
           M   Y L  G E +    + ++D+  + G+ + A    + M        W +L+     +
Sbjct: 384 MKREYKLEPGPEHY----SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439

Query: 420 GDVESAREVFSEM----PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
            +V+ A   F+++    P  ++I +  ++  +  ++  +E +   RVM+ ER
Sbjct: 440 KNVDMAELAFAKVIEFEP--NNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER 489


>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/568 (36%), Positives = 349/568 (61%), Gaps = 1/568 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYG-ECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
           ++H  +++     D F+ + +I  Y     ++     VF+++    +V W  +I   ++ 
Sbjct: 35  ELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQS 94

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           D P EA++++  M  +GI  N++T++ +  ACA++ ++  G ++  +  +LG ++   + 
Sbjct: 95  DHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVS 154

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           NAL+ MY  CG +  A+++F    DR+LV  NT++  Y +    +E L + D M     +
Sbjct: 155 NALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIK 214

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            D VTM+  + A + LGD         Y+  N LE    + NT+IDMY +    E+A  +
Sbjct: 215 ADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGV 274

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           FD M  + +VSWN+L+ G  K G++ +AR++F  MP RD ISW +M+ G +Q + F +A+
Sbjct: 275 FDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAV 334

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           +LF+ M++ ++K D+VT+  V SAC +LG LD+   ++ YI ++G+  D+ +  +L+DM+
Sbjct: 335 KLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMY 394

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
            +CG  ++A++VF RM+ +D  +WT+ I  +A+ G    A++LF++MLR+G++P    FV
Sbjct: 395 CKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFV 454

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           G+L AC+H GLVN+G   F SM  +HG+ P + HYGC+VDLL R+G + +A + IK MP+
Sbjct: 455 GILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPI 514

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
            P+ V+W  LL+AC+ H NV +A  A +R+ ELDP  SG +VLLSN YA   +W +  ++
Sbjct: 515 VPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKM 574

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFT 725
           R  M++  ++K  GSSSIEV+G V  ++
Sbjct: 575 RELMEDSDVQKPSGSSSIEVDGMVSNYS 602



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 165/575 (28%), Positives = 273/575 (47%), Gaps = 77/575 (13%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
           LATP     T+   A  + + S      KN  + +  K+ H H+++  L   P  +S V+
Sbjct: 3   LATPNTRLFTSSSMAPKSGRVS------KNSISTDTSKELHAHLIRTQLHTDPFLMSDVI 56

Query: 72  CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
            + +   T  +L  A   F+          TL ++N +IRG S     VEAI +Y  +  
Sbjct: 57  RSYSLSST--NLHKAHLVFNQI-----ECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHH 109

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            GI  +  T  F+  AC + S    G ++H   +K+GF+  +FV N LI+ Y  CG +  
Sbjct: 110 QGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGF 169

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            +++FD M +R++VSW +LIC  ++ +  KE + LF  M    IK ++VTMV +I AC+ 
Sbjct: 170 AQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSH 229

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L + E  D +  YI E  ++ +  + N L+DMY +    + A+ +F   ++RN+V  N +
Sbjct: 230 LGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNAL 289

Query: 312 MSNYVRLG---LAR----------------------------EALAILDEMLLHGPRPDR 340
           +  + ++G    AR                            +A+ +  EM+    +PD+
Sbjct: 290 VMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDK 349

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           VT+ S +SA A LG L  G   H Y+ R+G++    + N++IDMY KCG  E A  +F  
Sbjct: 350 VTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHR 409

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
           M +K  VSW S+I+GL  NG   SA ++FS+                             
Sbjct: 410 MKDKDSVSWTSVISGLAVNGFANSALDLFSQ----------------------------- 440

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATALVDMFAR 519
             ML E ++    T VG+  AC + G ++     +  +E  +G+   M+    +VD+ +R
Sbjct: 441 --MLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSR 498

Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
            G+  +A +  ++M    DV  W   + A  + GN
Sbjct: 499 SGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGN 533


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/657 (35%), Positives = 359/657 (54%), Gaps = 49/657 (7%)

Query: 206 SWTSLICACARRDLPKEAVYLFFEM--VEEGIKPNSV--TMVCVISACAKLQNLELGDRV 261
           SW   I   A +     A+ LF  M   +     +SV  ++   + +CA L    LG  +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGA--------------VDTAKQLFGECKDRNLVL 307
            A     G  A+    NAL+++Y K  A              +++ +++F E  ++++V 
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            NT++      G   EAL ++ EM   G +PD  T+ S +   A+  D+  G   HG+  
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           RNG      + +++IDMY  C + + + ++FD++                          
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNL-------------------------- 234

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                P RD I WN+ML G  Q    +EA+ LFR ML   IK   VT   +  ACG L +
Sbjct: 235 -----PVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLAS 289

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L L K ++AY+ + G   ++ ++++L+DM+ +CG+   A ++F R++  D+ +WTA I  
Sbjct: 290 LLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMG 349

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            A+ G   +A+ LF+ M    +KP+ I F+ VLTACSH GLV++GW  F SM+D +G+ P
Sbjct: 350 HALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVP 409

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
            + H+  + D LGR G L EA + I  M ++P   +W +LL AC+ H+N  +A   A++I
Sbjct: 410 SLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKI 469

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
            +L+P   G H++LSN Y+S+G+W   A +R  M+++G++K P  S IEV  K H F + 
Sbjct: 470 FDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAH 529

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           D+SHP    I   L   + ++   GYVP+  +V  D++E++K  +L  HSEKLA+ FG+I
Sbjct: 530 DKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGII 589

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ST     IRV+KNLR+C DCH+  K +SK+  REI++RD NRFH F+ G CSC DFW
Sbjct: 590 STPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 214/477 (44%), Gaps = 50/477 (10%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY--------------GE 185
           + P  L +C        G  +H   ++ G   D F  N L+N Y              G 
Sbjct: 60  SLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGS 119

Query: 186 CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCV 245
              +   R+VFDEM E++VVSW +L+  CA      EA+ L  EM  +G KP+S T+  V
Sbjct: 120 AVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSV 179

Query: 246 ISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
           +   A+  ++  G  +  +    G   +  + ++L+DMY  C   D + ++F     R+ 
Sbjct: 180 LPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDA 239

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           +L N++++   + G   EAL +   ML  G +P  VT  S + A   L  LL G+  H Y
Sbjct: 240 ILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAY 299

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           V+R G +G   I +++IDMY KCG   +A RIFD + +  +VSW ++I G   +G     
Sbjct: 300 VIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHG----- 354

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                  P R                   EA+ LF  M    +K + +T + V +AC + 
Sbjct: 355 -------PAR-------------------EALVLFDRMELGNLKPNHITFLAVLTACSHA 388

Query: 486 GALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTA 543
           G +D   K+  +  +  GI   ++   AL D   R G  + A      M+ K   S W+ 
Sbjct: 389 GLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWST 448

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT-ACSHGGLVNQGWHLFRSM 599
            + A  +  N   A E+  ++    ++P S+    +L+   S  G  N+  HL +SM
Sbjct: 449 LLRACKVHKNTVLAEEVAKKIF--DLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSM 503



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 172/357 (48%), Gaps = 15/357 (4%)

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
           G+   L   +K FD   + +  S     +N+L+ G +  G   EA+ L  E+   G  PD
Sbjct: 118 GSAVVLESVRKVFDEMPEKDVVS-----WNTLVLGCAESGRHGEALGLVREMWRDGCKPD 172

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
            FT   VL    + +    G+++HG   + GF  DVFV + LI+ Y  C       +VFD
Sbjct: 173 SFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFD 232

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
            +  R+ + W S++  CA+     EA+ LF  M+  GIKP  VT   +I AC  L +L L
Sbjct: 233 NLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLL 292

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G ++ AY+   G   N  + ++L+DMY KCG V  A+++F   +  ++V    ++  +  
Sbjct: 293 GKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHAL 352

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLE 372
            G AREAL + D M L   +P+ +T L+ ++A +  G +  G      M   Y +   LE
Sbjct: 353 HGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLE 412

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESAREV 428
              ++ +T+     + GK E A      M  K   S W++L+     + +   A EV
Sbjct: 413 HHAALADTL----GRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEV 465


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/728 (33%), Positives = 385/728 (52%), Gaps = 36/728 (4%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV---QVHGAIVKMG-FDRDVFVE 176
           +A+SL+ ++   G+ PD+ T   VLN    S      +    +H   +K+G    +V V 
Sbjct: 119 DAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVC 178

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N L++ Y + G +   RRVF EM  R+ V++ +++  C++     EA+ LF  M  +G+ 
Sbjct: 179 NTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLA 238

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
               T   V++    + +L LG +V   +      +N  + N+L+D Y KC  +D  K+L
Sbjct: 239 ATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCLDEMKKL 297

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F E  +R+ V  N +++ Y     A   L +  EM         +   S +S +  +  +
Sbjct: 298 FHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHI 357

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G+  H  ++  GL   D + N +IDMY KCG  + A   F + ++KT VSW ++I G 
Sbjct: 358 GIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGC 417

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
           ++NG                                 EEA++LF  M    +  DR T  
Sbjct: 418 VQNGQQ-------------------------------EEALQLFCGMRRAGLSPDRATFS 446

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
               A   L  + L + +++Y+ ++G    +   +AL+DM+ +CG    A+Q F  M +R
Sbjct: 447 STIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPER 506

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           +  +W A I A A  G  + A+++F  ML  G KPDS+ F+ VL+ACSH GL  +    F
Sbjct: 507 NSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYF 566

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
             M   +G+SP   HY C++D LGR G   +  +++  MP E + +IW S+L +C+ H N
Sbjct: 567 ELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGN 626

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
            D+A  AAE++  +    +  +V+LSNI+A AGKW + A V+  M+++G+RK  G S +E
Sbjct: 627 QDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVE 686

Query: 717 VNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHH 776
           V  KV+ F+S D+++P +  I   L  +   +   GY PD +  L  VD+  K   L +H
Sbjct: 687 VKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYH 746

Query: 777 SEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
           SE+LA+AF LI+T    PIRV+KNL  C DCHS  K++SK+ +R+IIVRD++RFH F+ G
Sbjct: 747 SERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDG 806

Query: 837 SCSCSDFW 844
            CSC D+W
Sbjct: 807 FCSCGDYW 814



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 234/521 (44%), Gaps = 55/521 (10%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+++ G S  G   EA+ L+  +   G+   +FTF  VL   T       G QVHG +V
Sbjct: 209 YNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHG-LV 267

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
                 +VFV N L++FY +C  + + +++F EM ER+ VS+  +I   A        + 
Sbjct: 268 ARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLR 327

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF EM        ++    ++S    + ++ +G ++ A +  LG+ +  L+ NAL+DMY 
Sbjct: 328 LFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYS 387

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG +D AK  F    D+  V    +++  V+ G   EAL +   M   G  PDR T  S
Sbjct: 388 KCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSS 447

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + AS+ L  +  GR  H Y++R+G        + ++DMY KCG  + A + FD M  + 
Sbjct: 448 TIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERN 507

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMP----GRDHISWNTMLGGLTQENMFEEAMELFR 461
            +SWN++I+     G  ++A ++F  M       D +++ ++L   +   + EE M+ F 
Sbjct: 508 SISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFE 567

Query: 462 VMLSE------------------RI-KVDRVT-MVG-------------VASACGYLGAL 488
           +M  E                  R+ + D+V  M+G             +  +C   G  
Sbjct: 568 LMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQ 627

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-----AWTA 543
           DLA+     +   G   D      L ++FA+ G  + A  V + M  R +      +W  
Sbjct: 628 DLARVAAEKLFSMG-STDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVE 686

Query: 544 AIGAMAMEGNGEQA-----------VELFNEMLRQGIKPDS 573
               +    + +Q              L+ EM +QG KPD+
Sbjct: 687 VKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDT 727



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 219/527 (41%), Gaps = 74/527 (14%)

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN-------------------- 203
           +VK GFD   +  N L++     G +   R +FD+M  RN                    
Sbjct: 25  MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSA 84

Query: 204 --------------VVSWTSLICACARRDLPK--EAVYLFFEMVEEGIKPNSVTMVCVIS 247
                          V+WT +I A A     +  +AV LF +M+ EG+ P+ VT+  V++
Sbjct: 85  AHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLN 144

Query: 248 ---ACAKLQNLELGDRVCAYIDELGM-KANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
              A        +   +  +  +LG+  +N ++ N L+D Y K G +  A+++F E   R
Sbjct: 145 LPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHR 204

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           + V  N +M    + G   EAL +   M   G    R T  + ++ +  +GDL  GR  H
Sbjct: 205 DSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVH 264

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
           G V R        + N+++D Y KC          D M                      
Sbjct: 265 GLVAR-ATSSNVFVNNSLLDFYSKCD-------CLDEM---------------------- 294

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
             +++F EM  RD++S+N M+ G          + LFR M S       +    + S  G
Sbjct: 295 --KKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAG 352

Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
            +  + + K I+A +   G+  +  +  AL+DM+++CG    A   F     +   +WTA
Sbjct: 353 SVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTA 412

Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
            I      G  E+A++LF  M R G+ PD   F   + A S+  ++  G  L   +    
Sbjct: 413 MITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIR-S 471

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           G    +     ++D+  + G L EAL     MP E N + W ++++A
Sbjct: 472 GHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP-ERNSISWNAVISA 517



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 7/207 (3%)

Query: 97  NETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
           N+   T   + ++I G    G   EA+ L+  +   G+ PD+ TF   + A +  +  G 
Sbjct: 401 NKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGL 460

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G Q+H  +++ G    VF  + L++ Y +CG + +  + FDEM ERN +SW ++I A A 
Sbjct: 461 GRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAH 520

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID----ELGMKA 272
               K A+ +F  M+  G KP+SVT + V+SAC+   +  L +    Y +    E G+  
Sbjct: 521 YGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACS---HNGLAEECMKYFELMEYEYGISP 577

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGE 299
                + ++D   + G  D  +++ GE
Sbjct: 578 WKEHYSCVIDTLGRVGRFDKVQEMLGE 604


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/764 (31%), Positives = 393/764 (51%), Gaps = 61/764 (7%)

Query: 83   LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
            L  AQ  F      N T+ T+ M     R ++  G   +A+SL+  + G G++PD+ T  
Sbjct: 304  LPAAQHLFLSSPHRNATTWTIMM-----RAHAAAGRTSDALSLFRAMLGEGVIPDRVTVT 358

Query: 143  FVLN--ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
             VLN   CT  S       +H   +K G D  VFV N L++ Y + G +   RRVF EM 
Sbjct: 359  TVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH 411

Query: 201  ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            +++ V++ +++  C++  L  +A+ LF  M   G   + + +         LQ      R
Sbjct: 412  DKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHL---------LQYSHSRSR 462

Query: 261  VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
              + +       N  + N+L+D Y KC  +D  ++LF E  +R+ V  N I++ Y     
Sbjct: 463  STSVL-------NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC 515

Query: 321  AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
            A   L +  EM   G     +   + +S +  L D+  G+  H  ++  GL   D + N 
Sbjct: 516  AATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA 575

Query: 381  MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
            +IDMY KCG                                +++A+  FS    +  ISW
Sbjct: 576  LIDMYSKCGM-------------------------------LDAAKSNFSNRSEKSAISW 604

Query: 441  NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
              ++ G  Q    EEA++LF  M    ++ DR T   +  A   L  + L + +++Y+ +
Sbjct: 605  TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 664

Query: 501  NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
            +G    +   + LVDM+A+CG    A++ F  M +R+  +W A I A A  G  + A+++
Sbjct: 665  SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 724

Query: 561  FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
            F  ML  G  PDS+ F+ VL ACSH GL ++    F  M   + +SP   HY C++D LG
Sbjct: 725  FEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 784

Query: 621  RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
            R G   +   ++  MP + + +IW S+L +C+ H N ++A  AA+++  ++P  +  +V+
Sbjct: 785  RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVI 844

Query: 681  LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
            LSNIYA AG+W + A V+  M+++G+RK  G S +E+  K++ F S D + P ++ I   
Sbjct: 845  LSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDE 904

Query: 741  LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
            L  +   +   GY PD+T  L  VD + K   L +HSE+LA+AF L++T    PIR++KN
Sbjct: 905  LDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKN 964

Query: 801  LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            L  C DCH+  K++SK+ +R+IIVRD+ RFH F+ G CSC D+W
Sbjct: 965  LTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 8/202 (3%)

Query: 370 GLEGWDSIC---NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           G+ G+D +    N  +   +  G    A  +FD M +K + S N +++    +GD+ +A+
Sbjct: 249 GVTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQ 308

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
            +F   P R+  +W  M+          +A+ LFR ML E +  DRVT+  V +  G   
Sbjct: 309 HLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGC-- 366

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
                  ++ +  K G+   + +   L+D + + G    A +VF  M  +D   + A + 
Sbjct: 367 ---TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMM 423

Query: 547 AMAMEGNGEQAVELFNEMLRQG 568
             + EG   QA++LF  M R G
Sbjct: 424 GCSKEGLHTQALQLFAAMRRAG 445


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/695 (35%), Positives = 380/695 (54%), Gaps = 42/695 (6%)

Query: 26  AKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
           A T  +    +G     ++ +E K+ H  IL  G+    +  SK+  T AQ       +Y
Sbjct: 8   ATTAAQCESLLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQC---HHASY 64

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFV 144
           A   FD       +   LF +N+++R Y  IG   +A++L+VE+ G G  LPDKFT+P V
Sbjct: 65  ASHLFD-----KLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVV 119

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           + AC   S    GV +HG   K G+D D FV+N L+  Y   G+    + VFD M ER V
Sbjct: 120 IKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTV 179

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           +SW ++I    R +  ++AV ++  M++ G++P+  T+V V+ AC  L+N+ELG  V   
Sbjct: 180 ISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTL 239

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           + E G   N ++ NALVDMY+KCG +  A  L     D+++V   T+++ Y+  G AR A
Sbjct: 240 VQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSA 299

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +   M   G +P+ V++ S +SA   L  L  G+  H + +R  +E    +   +I+M
Sbjct: 300 LMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINM 359

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KC    ++ ++F   S K    WN+L                               L
Sbjct: 360 YAKCNCGNLSYKVFMGTSKKRTAPWNAL-------------------------------L 388

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
            G  Q  +  EA+ELF+ ML + ++ D  T   +  A   L  L  A  I+ Y+ ++G  
Sbjct: 389 SGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFL 448

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFR--RMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
             +++A+ LVD++++CG    A Q+F    ++ +D+  W+A I A    G+G+ AV+LFN
Sbjct: 449 YRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFN 508

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           +M++ G+KP+ + F  VL ACSH GLVN+G+ LF  M   H +   + HY CM+DLLGRA
Sbjct: 509 QMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRA 568

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G L +A +LI++MP+ PN  +WG+LL AC  H+NV++   AA    +L+PE +G +VLL+
Sbjct: 569 GRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLA 628

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
            +YA+ G+W +  RVR  + E G+RKLP  S IEV
Sbjct: 629 KLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEV 663


>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
 gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 341/592 (57%), Gaps = 37/592 (6%)

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +VD A  +F   + +N  L N ++           +++    ML     PDR+T    + 
Sbjct: 89  SVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLK 148

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICN-TMIDMYMKC------------------- 388
           ++A L +   GR  H  +L+ GLE +DS    +++DMY+K                    
Sbjct: 149 SAAALSNGGVGRALHCGILKFGLE-FDSFVRVSLVDMYVKVEELGSALKVFDESPESVKN 207

Query: 389 ----------------GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
                           G    A  +FD M  K   SWNSLI G +K GD+  A+E+F +M
Sbjct: 208 GSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKM 267

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           P ++ +SW TM+ G +Q    E+A+E F  ML E  + +  T+V   SAC  +GALD   
Sbjct: 268 PEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGL 327

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I+ Y+  NG   ++ + TALVDM+A+CG+ + A +VF   +++ +  W+  I   A+ G
Sbjct: 328 RIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHG 387

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
           +  +A++ F  M   G KPDS+VF+ VL ACSH G VN+G   F +M   + + P + HY
Sbjct: 388 HFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHY 447

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
             +VD+LGRAG L EAL  I++MP+ P+ V+WG+L  AC+ H+NV++A  A++++ +L+P
Sbjct: 448 TLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEP 507

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           +  G +V LSN YAS G+W +  RVR+ M++ G  K PG S IEV+ K+H F +GD +H 
Sbjct: 508 KHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHN 567

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
               I S L E++   R+ GY  ++  VL +++E+EK+  L +HSEKLA+AFG++ST   
Sbjct: 568 RAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPG 627

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             +R+VKNLR+C DCHSF K  SK+  REII+RD  RFH F  G CSC D+W
Sbjct: 628 TTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 204/454 (44%), Gaps = 84/454 (18%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           + ++L+Q H  + +  +      +++ + +C+ +    S+ YA   F  +   N      
Sbjct: 54  STHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSL---NSVDYAISIFQRFELKNS----- 105

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           +++N+LIRG +       +IS +V +  + I PD+ TFPFVL +    S  G G  +H  
Sbjct: 106 YLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCG 165

Query: 164 IVKMGFDRDVFVE-----------------------------------NCLINFYGECGD 188
           I+K G + D FV                                    N LI+ Y   GD
Sbjct: 166 ILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGD 225

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACAR-------RDL---------------------- 219
           +V    +FD M +++  SW SLI    +       ++L                      
Sbjct: 226 LVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQN 285

Query: 220 --PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
             P++A+  FF M+EEG +PN  T+V  +SACAK+  L+ G R+  Y+   G K N ++ 
Sbjct: 286 GDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIG 345

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
            ALVDMY KCG ++ A+++F E K++ L++ + ++  +   G  R+AL   + M   G +
Sbjct: 346 TALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTK 405

Query: 338 PDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           PD V  L+ ++A +  G +  G      M  GY++   ++ +      ++DM  + G+ +
Sbjct: 406 PDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHY----TLVVDMLGRAGRLD 461

Query: 393 MACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESA 425
            A +    M      V W +L      + +VE A
Sbjct: 462 EALKFIRAMPITPDFVVWGALFCACRTHKNVEMA 495


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/784 (30%), Positives = 405/784 (51%), Gaps = 44/784 (5%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF--- 80
           H+A   P        L +C       Q     L    G+K  + S++    A +  +   
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGR---LIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 81  ESLTYAQKAF-DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
            S   A++ F D   +D  T      +N+LI G++  G G  A+ ++ E+   G+ PD  
Sbjct: 192 GSFRLAERVFCDMPHRDTVT------FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCV 245

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L AC       +G Q+H  + K G   D  +E  L++ Y +CGD+     +F+  
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              NVV W  ++ A  + +   ++  LF +M   GI+PN  T  C++  C   + ++LG+
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ +   + G +++  +   L+DMY K G ++ A+++    K++++V   ++++ YV+  
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
             ++ALA   EM   G  PD + + SA+S  A +  +  G   H  +  +G  G  SI N
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWN 485

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++++Y +C                               G +  A   F E+  +D I+
Sbjct: 486 ALVNLYARC-------------------------------GRIREAFSSFEEIEHKDEIT 514

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           WN ++ G  Q  + EEA+++F  M    +K +  T V   SA   L  +   K I+A + 
Sbjct: 515 WNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVI 574

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G   + ++  AL+ ++ +CG  + A   F  M +R+  +W   I + +  G G +A++
Sbjct: 575 KTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALD 634

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF++M ++GIKP+ + F+GVL ACSH GLV +G   F+SM+D +G+ P+  HY C++D+ 
Sbjct: 635 LFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIF 694

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L  A   I+ MP+  + ++W +LL+AC+ H+N+++  +AA+ + EL+P  S  +V
Sbjct: 695 GRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYV 754

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN YA   KW N  +VR  M+++G+RK PG S IEV   VH F  GD  HP    I +
Sbjct: 755 LLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYN 814

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L  +N R+   GY  +  ++  D +++ +      HSEKLA+ FGL+S    MP+RV+K
Sbjct: 815 FLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIK 874

Query: 800 NLRL 803
           NLR+
Sbjct: 875 NLRV 878



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 244/511 (47%), Gaps = 34/511 (6%)

Query: 141 FPFVLNACTKSSAFGEGV-QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           F   L AC  +    + V ++H   V  G  +   V N LI+ Y + G ++  RRVF+E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           S R+ VSW +++   A+  L +EA+ L+ +M   G+ P    +  V+S+C K +    G 
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            + A   + G  +   + NA++ +Y++CG+   A+++F +   R+ V  NT++S + + G
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
               AL I +EM   G  PD VT+ S ++A A LGDL  G   H Y+ + G+     +  
Sbjct: 224 HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEG 283

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +++D+Y+KCG  E A  IF+      VV WN                             
Sbjct: 284 SLLDLYVKCGDVETALVIFNSSDRTNVVLWN----------------------------- 314

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
              ML    Q N   ++ ELF  M +  I+ ++ T   +   C     +DL + I++   
Sbjct: 315 --LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G   DM ++  L+DM+++ G  ++A +V   ++++DV +WT+ I         + A+ 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            F EM + GI PD+I     ++ C+    + QG  +   +  + G S  +  +  +V+L 
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLY 491

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            R G + EA    + +    +++ W  L++ 
Sbjct: 492 ARCGRIREAFSSFEEIE-HKDEITWNGLVSG 521


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/574 (38%), Positives = 335/574 (58%), Gaps = 31/574 (5%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           K N +  N L+  Y+K G ++TA++LF E   RN+   N +++     GL  E+L     
Sbjct: 105 KRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFA 164

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M   G +PD   + S     A L D++ GR  H YV+R+GL+    + +++  MYM+CG 
Sbjct: 165 MRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG- 223

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
                                     +++G+          +P  + +S NT + G TQ 
Sbjct: 224 -------------------------FLRDGEA-----ALRALPSLNIVSCNTTISGRTQN 253

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
              E A+E F +M    ++ + VT V   ++C  L AL   + I+A   K G+   + + 
Sbjct: 254 GDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVM 313

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           T+LV M++RCG    + +V       D+   +A I A    G+G++AV LF +M+  G +
Sbjct: 314 TSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAE 373

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           P+ + F+ +L ACSH GL ++G + F  MT  +G+ P + HY C+VDLLGR+G L EA D
Sbjct: 374 PNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAED 433

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           LI SMPV+P+ VIW +LL+AC+  +  D+A   AER+ ELDP  S  +VLLSNI A++ +
Sbjct: 434 LILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSR 493

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W +V++VR  M+EQ +RK PG S +E+ G++H+F +GDESH     I   L EM  R+R 
Sbjct: 494 WEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQ 553

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            GY PD++ V  D++++EK+  L+HHSEKLA+AF  +S  + +PIRV+KNLR+C DCH  
Sbjct: 554 CGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVA 613

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            KL+SKV  REI+VRD +RFH F+ G CSC D+W
Sbjct: 614 IKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 144/306 (47%), Gaps = 33/306 (10%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N ++  Y   G    A  +F+ +  + V+SWN LI G +KNGD+E+AR++F EMP R+  
Sbjct: 81  NHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVA 140

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +WN M+ GLT   + EE++  F  M  E ++ D   +  +   C  L  +   + ++AY+
Sbjct: 141 TWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYV 200

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            ++G+  DM + ++L  M+ RCG  +      R +   ++ +    I      G+ E A+
Sbjct: 201 VRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGAL 260

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW--HLFRSMTDIHGVSP---QIVHY- 612
           E F  M   G++ +++ FV  +T+CS    + QG   H     T +  V P    +VH  
Sbjct: 261 EFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMY 320

Query: 613 ---GC---------------------MVDLLGRAGLLGEALDLIKSM---PVEPNDVIWG 645
              GC                     M+   G  G   +A+ L K M     EPN+V + 
Sbjct: 321 SRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFL 380

Query: 646 SLLAAC 651
           +LL AC
Sbjct: 381 TLLYAC 386



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 171/386 (44%), Gaps = 36/386 (9%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
           D+FT   +L A      F     +   I K    R+V   N LI  Y + GD+   R++F
Sbjct: 76  DRFTANHLLLAYADLGDFPTARGLFERIPK----RNVMSWNILIGGYVKNGDLETARKLF 131

Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
           DEM  RNV +W +++       L +E++  FF M  EG++P+   +  +   CA L+++ 
Sbjct: 132 DEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVV 191

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
            G +V AY+   G+  +  + ++L  MYM+CG +   +         N+V CNT +S   
Sbjct: 192 SGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRT 251

Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
           + G A  AL     M   G   + VT +SAV++ + L  L  G+  H   ++ G++    
Sbjct: 252 QNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVP 311

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +  +++ MY +CG     C                        GD E    V  E  G D
Sbjct: 312 VMTSLVHMYSRCG-----CL-----------------------GDSE---RVCLEYSGTD 340

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            +  + M+         ++A+ LF+ M++   + + VT + +  AC + G  D     + 
Sbjct: 341 LVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFE 400

Query: 497 YIEKN-GIHCDMQLATALVDMFARCG 521
            + K  G+   ++  T +VD+  R G
Sbjct: 401 LMTKTYGLQPSVKHYTCIVDLLGRSG 426



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 5/272 (1%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+K FD     N  +     +N+++ G +  GL  E++  +  +   G+ PD++   
Sbjct: 124 LETARKLFDEMPARNVAT-----WNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLG 178

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +   C        G QVH  +V+ G DRD+ V + L + Y  CG + DG      +   
Sbjct: 179 SLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSL 238

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N+VS  + I    +    + A+  F  M   G++ N+VT V  +++C+ L  L  G ++ 
Sbjct: 239 NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIH 298

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           A   + G+     ++ +LV MY +CG +  ++++  E    +LVLC+ ++S Y   G  +
Sbjct: 299 ALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQ 358

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           +A+ +  +M+  G  P+ VT L+ + A +  G
Sbjct: 359 KAVGLFKQMMAAGAEPNEVTFLTLLYACSHSG 390



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 98  ETSAT-LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
           E S T L + +++I  Y   G G +A+ L+ ++   G  P++ TF  +L AC+ S    E
Sbjct: 335 EYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDE 394

Query: 157 GVQVHGAIVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
           G+     + K  G    V    C+++  G  G + +   +   M  + + V W +L+ AC
Sbjct: 395 GMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC 454



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 5/121 (4%)

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
           AL L + ++A+   +G   D   A  L+  +A  GD   A  +F R+ KR+V +W   IG
Sbjct: 57  ALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIG 116

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
                G+ E A +LF+EM  + +   + +  G+    ++ GL  +    F +M    G+ 
Sbjct: 117 GYVKNGDLETARKLFDEMPARNVATWNAMVAGL----TNSGLNEESLGFFFAMRR-EGMQ 171

Query: 607 P 607
           P
Sbjct: 172 P 172


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/784 (30%), Positives = 405/784 (51%), Gaps = 44/784 (5%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF--- 80
           H+A   P        L +C       Q     L    G+K  + S++    A +  +   
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGR---LIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 81  ESLTYAQKAF-DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
            S   A++ F D   +D  T      +N+LI G++  G G  A+ ++ E+   G+ PD  
Sbjct: 192 GSFRLAERVFCDMPHRDTVT------FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCV 245

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L AC       +G Q+H  + K G   D  +E  L++ Y +CGD+     +F+  
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              NVV W  ++ A  + +   ++  LF +M   GI+PN  T  C++  C   + ++LG+
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ +   + G +++  +   L+DMY K G ++ A+++    K++++V   ++++ YV+  
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
             ++ALA   EM   G  PD + + SA+S  A +  +  G   H  +  +G  G  SI N
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWN 485

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++++Y +C                               G +  A   F E+  +D I+
Sbjct: 486 ALVNLYARC-------------------------------GRIREAFSSFEEIEHKDEIT 514

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           WN ++ G  Q  + EEA+++F  M    +K +  T V   SA   L  +   K I+A + 
Sbjct: 515 WNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVI 574

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G   + ++  AL+ ++ +CG  + A   F  M +R+  +W   I + +  G G +A++
Sbjct: 575 KTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALD 634

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF++M ++GIKP+ + F+GVL ACSH GLV +G   F+SM+D +G+ P+  HY C++D+ 
Sbjct: 635 LFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIF 694

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L  A   I+ MP+  + ++W +LL+AC+ H+N+++  +AA+ + EL+P  S  +V
Sbjct: 695 GRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYV 754

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN YA   KW N  +VR  M+++G+RK PG S IEV   VH F  GD  HP    I +
Sbjct: 755 LLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYN 814

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L  +N R+   GY  +  ++  D +++ +      HSEKLA+ FGL+S    MP+RV+K
Sbjct: 815 FLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIK 874

Query: 800 NLRL 803
           NLR+
Sbjct: 875 NLRV 878



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 244/511 (47%), Gaps = 34/511 (6%)

Query: 141 FPFVLNACTKSSAFGEGV-QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           F   L AC  +    + V ++H   V  G  +   V N LI+ Y + G ++  RRVF+E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           S R+ VSW +++   A+  L +EA+ L+ +M   G+ P    +  V+S+C K +    G 
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            + A   + G  +   + NA++ +Y++CG+   A+++F +   R+ V  NT++S + + G
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
               AL I +EM   G  PD VT+ S ++A A LGDL  G   H Y+ + G+     +  
Sbjct: 224 HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEG 283

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +++D+Y+KCG  E A  IF+      VV WN                             
Sbjct: 284 SLLDLYVKCGDVETALVIFNSSDRTNVVLWN----------------------------- 314

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
              ML    Q N   ++ ELF  M +  I+ ++ T   +   C     +DL + I++   
Sbjct: 315 --LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G   DM ++  L+DM+++ G  ++A +V   ++++DV +WT+ I         + A+ 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            F EM + GI PD+I     ++ C+    + QG  +   +  + G S  +  +  +V+L 
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLY 491

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
            R G + EA    + +    +++ W  L++ 
Sbjct: 492 ARCGRIREAFSSFEEIE-HKDEITWNGLVSG 521


>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/559 (39%), Positives = 335/559 (59%), Gaps = 34/559 (6%)

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL-AREALAILDEMLLHG-PRPDRVTMLS 345
           G +D A++LF + +  N+   N+++    +    ++E + +  +M+  G P P+  TM  
Sbjct: 38  GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 97

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + A + +  L  G+  H  VL++G      +   +++ Y KC                 
Sbjct: 98  VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCE---------------- 141

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
                          D+  A +VF E+  R+ ++W+TM+ G  +  +  EA+ LFR M  
Sbjct: 142 ---------------DIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQK 186

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
             +  D VTMV V SAC   GALD  KW++AYI K  I  D++L+TALV+M+A+CG  +R
Sbjct: 187 AGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIER 246

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A +VF  M  +D  AW++ I  +A+ G  E A+E F  M    +KP+ + F+GVL+AC+H
Sbjct: 247 AKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAH 306

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV++G   + SM +  G+ P +  YGCMVDLL RA L+ +A  L+++MP+ PN VIW 
Sbjct: 307 SGLVSEGRRYWSSMLEF-GIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWR 365

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL  C+K +N+D +   A+R+ EL+P  +  ++LLSN+YAS  +W  +++VR +MK  G
Sbjct: 366 TLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMG 425

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           I+ +PG SSIEV+G VHEF  GD SHPE   +  +LR+++ R+   G+ P +++VL +V 
Sbjct: 426 IKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVV 485

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
           ++EK+  L  HSE+LA+A+GL+ T   M IR+VKNLR+C DCH   K++S  Y REIIVR
Sbjct: 486 DEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVR 545

Query: 826 DNNRFHFFRQGSCSCSDFW 844
           D  RFH F  GSCSC DFW
Sbjct: 546 DRVRFHKFVNGSCSCRDFW 564



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 206/388 (53%), Gaps = 15/388 (3%)

Query: 48  LKQPHCHILKQGLGHKPSYIS----KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           L+Q H  +L   +    S IS    K++  CA +  +  + YA+K F    + N     +
Sbjct: 4   LRQIHARLLTHAM--PISSISFGLCKIIGFCA-LSPYGDIDYARKLFSQIQRPN-----I 55

Query: 104 FMYNSLIRGYS-CIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVH 161
           F +NS+IRG S       E + L+ ++   G   P+ FT  FVL AC+  SA  EG QVH
Sbjct: 56  FSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVH 115

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             ++K GF    FVE  L+NFY +C DIV   +VFDE+++RN+V+W+++I   AR  L  
Sbjct: 116 ANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVN 175

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ LF +M + G+ P+ VTMV VISACA    L+ G  V AYI++  ++ +  +  ALV
Sbjct: 176 EALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALV 235

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           +MY KCG ++ AK++F     ++    ++++      GLA +AL     M     +P+ V
Sbjct: 236 NMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHV 295

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T +  +SA A  G +  GR     +L  G+     +   M+D+  +    E AC + + M
Sbjct: 296 TFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETM 355

Query: 402 S-NKTVVSWNSLIAGLIKNGDVESAREV 428
             +   V W +L+ G  K+ +++ +  V
Sbjct: 356 PISPNPVIWRTLLVGCKKSKNLDKSEVV 383



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 172/335 (51%), Gaps = 33/335 (9%)

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLP-KEAVYLFFEMVEEGI-KPNSVTMVC 244
           GDI   R++F ++   N+ SW S+I  C++   P KE V LF +MV  G   PN+ TM  
Sbjct: 38  GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 97

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V+ AC+ +  LE G +V A + + G  ++  +  ALV+ Y KC  +  A ++F E  DRN
Sbjct: 98  VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 157

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           LV  +T++S Y R+GL  EAL +  +M   G  PD VTM+S +SA A  G L  G+  H 
Sbjct: 158 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHA 217

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           Y+ +  +E    +   +++MY KCG  E A  +FD M  K   +W+S+I GL  NG  E 
Sbjct: 218 YINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAED 277

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A E F  M                     EEA          ++K + VT +GV SAC +
Sbjct: 278 ALEEFFRM---------------------EEA----------KVKPNHVTFIGVLSACAH 306

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
            G +   +  ++ + + GI   M+L   +VD+  R
Sbjct: 307 SGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCR 341



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 11/258 (4%)

Query: 39  LKNCK---TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C     L E +Q H ++LK G G  P   + +V   A+    E +  A K FD    
Sbjct: 99  LKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKC---EDIVLASKVFDEITD 155

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            N     L  ++++I GY+ IGL  EA+ L+ ++   G++PD+ T   V++AC  S A  
Sbjct: 156 RN-----LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALD 210

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G  VH  I K   + D+ +   L+N Y +CG I   + VFD M  ++  +W+S+I   A
Sbjct: 211 TGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLA 270

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
              L ++A+  FF M E  +KPN VT + V+SACA    +  G R  + + E G+  +  
Sbjct: 271 INGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSME 330

Query: 276 MVNALVDMYMKCGAVDTA 293
           +   +VD+  +   V+ A
Sbjct: 331 LYGCMVDLLCRASLVEDA 348


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/678 (35%), Positives = 369/678 (54%), Gaps = 43/678 (6%)

Query: 174 FVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA--RRDLPKEAVYLFFEMV 231
           F+ N L+N Y +   +   + V      R VV+WTSLI  C   RR LP  A+  F  M 
Sbjct: 43  FLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLP--ALLHFTNMR 100

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            + ++PN  T  CV  A A +Q    G ++     + GM  +  +  +  DMY K G   
Sbjct: 101 RDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRG 160

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A  +F E   RNL   N  +SN V+   + +A+    E L     P+ +T  + ++A  
Sbjct: 161 DACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACV 220

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            +  L  GR  H +++R G +   S+ N +ID Y KCG                      
Sbjct: 221 DMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCG---------------------- 258

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHI-SWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
                    D+ SA  VF+ +  R ++ SW +ML  L Q +  E A  +F   L  R +V
Sbjct: 259 ---------DIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVF---LQARKEV 306

Query: 471 DRVTMV--GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           +    +   V SAC  LG L+L + ++A   K  +  ++ + +ALVDM+ +CG  + A Q
Sbjct: 307 EPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQ 366

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML--RQGIKPDSIVFVGVLTACSHG 586
           VF  + +R++  W A IG  A +G+ + A+ LF EM     GI+P  +  + +L+ CS  
Sbjct: 367 VFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRV 426

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           G V +G  +F SM   +G+ P   H+ C+VDLLGR+GL+  A + I++M ++P   +WG+
Sbjct: 427 GAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGA 486

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+ H   ++   AAE++ ELD   SG HV+LSN+ ASAG+W     VR +MK+ GI
Sbjct: 487 LLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGI 546

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
           +K  G S I V  ++H F + D SH   + I +ML ++   +++AGYVPD    L D+++
Sbjct: 547 KKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLED 606

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EK   + +HSEK+A+AFGLI+  + +PIR+ KNLR+C DCHS  K +S++  REIIVRD
Sbjct: 607 EEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRD 666

Query: 827 NNRFHFFRQGSCSCSDFW 844
           N+RFH F+ G CSC D+W
Sbjct: 667 NHRFHRFKDGCCSCKDYW 684



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 229/511 (44%), Gaps = 48/511 (9%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H HI++  +   PS++S  +         + L  AQ              T+  + SLI 
Sbjct: 29  HAHIIRTHVTPLPSFLSNHLVN--MYSKLDLLNSAQHVLSL-----THLRTVVTWTSLIS 81

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE----GVQVHGAIVKM 167
           G       + A+  +  +    + P+ FTFP V     K+SAF +    G Q+HG  +K 
Sbjct: 82  GCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVF----KASAFVQIPMTGKQIHGLALKG 137

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
           G   DVFV     + Y + G   D   +FDEM +RN+ +W + I    +     +A+  F
Sbjct: 138 GMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAF 197

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            E +    +PNS+T    ++AC  +  L LG ++ A+I   G K +  + N L+D Y KC
Sbjct: 198 KEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKC 257

Query: 288 GAVDTAKQLFGECKDR-NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           G + +A+ +F    +R N+V   ++++  V+      A  +  +       P    + S 
Sbjct: 258 GDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSV 316

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           +SA A+LG L  GR  H   ++  +E    + + ++DMY KCG  E A ++F  +  + +
Sbjct: 317 LSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNL 376

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+WN++I G    GD++ A  +F EM           LG                   S 
Sbjct: 377 VTWNAMIGGYAHQGDIDMALRLFEEMT----------LG-------------------SH 407

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQR 525
            I+   VT++ + S C  +GA++    I+  +  N GI    +    +VD+  R G   R
Sbjct: 408 GIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDR 467

Query: 526 AMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           A +  + M  +  +S W A +GA  M G  E
Sbjct: 468 AYEFIQNMAIQPTISVWGALLGACRMHGKTE 498



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 199/429 (46%), Gaps = 11/429 (2%)

Query: 15  PTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           P +   TN  +    P D       K    +   + P       GL  K   I  V   C
Sbjct: 91  PALLHFTNMRRDNVQPNDFTFPCVFKASAFV---QIPMTGKQIHGLALKGGMIYDVFVGC 147

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           +    +    +   A + +  D      L  +N+ I         ++AI  + E      
Sbjct: 148 SCFDMYCKTGFRGDACNMF--DEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHG 205

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
            P+  TF   LNAC        G Q+H  IV+ G+  DV V N LI+FYG+CGDIV    
Sbjct: 206 EPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEM 265

Query: 195 VFDEMSER-NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ 253
           VF+ +  R NVVSW S++ A  +    + A  +F +  +E ++P    +  V+SACA+L 
Sbjct: 266 VFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELG 324

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            LELG  V A   +  ++ N  + +ALVDMY KCG+++ A+Q+F E  +RNLV  N ++ 
Sbjct: 325 GLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIG 384

Query: 314 NYVRLGLAREALAILDEMLL--HGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNG 370
            Y   G    AL + +EM L  HG RP  VT++S +S  +++G +  G ++     L  G
Sbjct: 385 GYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYG 444

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESAREVF 429
           +E        ++D+  + G  + A     +M+ +  +S W +L+     +G  E  +   
Sbjct: 445 IEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAA 504

Query: 430 SEMPGRDHI 438
            ++   DH+
Sbjct: 505 EKLFELDHV 513


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/615 (38%), Positives = 338/615 (54%), Gaps = 39/615 (6%)

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G+  +  + ++L+  Y++ GA   A+ +F    ++N+V  + +++ Y   G A  A  +L
Sbjct: 47  GLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLL 106

Query: 329 DEMLLHGPRP-------------------DRVTML----------------SAVSASAQL 353
           ++M   G  P                   D VT L                 A+SA   +
Sbjct: 107 EQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDV 166

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
            ++  G+  HGYV++ G      +   +IDMY KCG+ +   R+F   S+  V S N+L+
Sbjct: 167 KEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALV 226

Query: 414 AGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           AGL +N  V  A  +F E   R    + +SW +++    Q     EA++LFR M S  ++
Sbjct: 227 AGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVE 286

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
            + VT+  V  A   + AL   +  + +  + G   D+ + +ALVDM+A+CG  + A  +
Sbjct: 287 PNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTI 346

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
           F  M  R+V +W A IG  AM G+   AV+LF  M +   KPD + F  VL ACS  GL 
Sbjct: 347 FDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLT 406

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
            +G   F  M   HG+SP++ HY CMV LLGR+G L EA DLI  MP EP+  IWGSLL 
Sbjct: 407 EEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLG 466

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           +C+ + NV +A  AAE++ +L+P  +G +VLLSNIYAS   W  V RVR +MK  G++K 
Sbjct: 467 SCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKE 526

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
            G S IE+  KVH   +GD SHP M  I+  L ++   +   G+ P    VL DV+EQEK
Sbjct: 527 KGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEK 586

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
             +L+ HSEKLA+A GLIST    P+RV+KNLR+C DCH   K +S    REI VRD NR
Sbjct: 587 DNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNR 646

Query: 830 FHFFRQGSCSCSDFW 844
           FH F+ G CSC D+W
Sbjct: 647 FHHFKDGKCSCGDYW 661



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 171/414 (41%), Gaps = 77/414 (18%)

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
           SLY  L      PD    P  L +C           +H A V  G   D FV + L++ Y
Sbjct: 6   SLYHFLRHVSFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSY 62

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT-- 241
              G     R VFD M E+NVV W++LI   + R   + A  L  +M   G++PN +T  
Sbjct: 63  IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWN 122

Query: 242 ---------------------------------MVCVISACAKLQNLELGDRVCAYIDEL 268
                                            + C +SA   ++ + +G +V  Y+ + 
Sbjct: 123 GLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKA 182

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           G + +A +V AL+DMY KCG  D   ++F E    ++  CN +++   R     EAL + 
Sbjct: 183 GCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF 242

Query: 329 DEMLLH-----------------------------------GPRPDRVTMLSAVSASAQL 353
            E +                                     G  P+ VT+   + A A +
Sbjct: 243 REFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANV 302

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
             L+ GR  H + LR G      + + ++DMY KCGK   A  IFD M ++ VVSWN++I
Sbjct: 303 AALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMI 362

Query: 414 AGLIKNGDVESAREVFSEM----PGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
            G   +GD  +A ++F  M       D +++  +LG  +Q  + EE    F  M
Sbjct: 363 GGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEM 416



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 157/378 (41%), Gaps = 49/378 (12%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
            +  +N L+ G +  G  ++A++  V +   G  PD       L+A         G QVH
Sbjct: 117 NVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVH 176

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS--------------------- 200
           G +VK G   D  V   LI+ YG+CG   +  RVF E S                     
Sbjct: 177 GYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVS 236

Query: 201 --------------ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
                         E NVVSWTS++  C +     EAV LF  M   G++PNSVT+ CV+
Sbjct: 237 EALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVL 296

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
            A A +  L  G     +    G   +  + +ALVDMY KCG    A+ +F     RN+V
Sbjct: 297 PAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVV 356

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----M 361
             N ++  Y   G A  A+ +   M     +PD VT    + A +Q G    GR     M
Sbjct: 357 SWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEM 416

Query: 362 CHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNG 420
             G+ +   +E +      M+ +  + GK + A  + + M        W SL+      G
Sbjct: 417 QQGHGISPRMEHY----ACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYG 472

Query: 421 DV----ESAREVFSEMPG 434
           +V     +A ++F   PG
Sbjct: 473 NVLLAEVAAEKLFQLEPG 490



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 5/271 (1%)

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
            R  H   + +GL     + ++++  Y++ G    A  +FD M  K VV W++LIAG   
Sbjct: 36  ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSA 95

Query: 419 NGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
            GD E+A  +  +M       + I+WN ++ GL +     +A+     M SE    D   
Sbjct: 96  RGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATG 155

Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
           +    SA G +  + + K ++ Y+ K G   D  + TAL+DM+ +CG     ++VF    
Sbjct: 156 VSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESS 215

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
             DV++  A +  ++      +A+ LF E + +G++ + + +  ++  C   G   +   
Sbjct: 216 HMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVD 275

Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
           LFR+M  I GV P  V   C++        L
Sbjct: 276 LFRTMQSI-GVEPNSVTIPCVLPAFANVAAL 305



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 54/101 (53%)

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
           A  LA+ ++A    +G+  D  +A++L+  + R G    A  VF RM +++V  W+A I 
Sbjct: 32  AQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIA 91

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
             +  G+ E A  L  +M   G++P+ I + G+++  +  G
Sbjct: 92  GYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSG 132



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 22/185 (11%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +  N   L   +  HC  L++G  H     S +V   A+ G      +A+  FD     N
Sbjct: 298 AFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKAR---HARTIFDAMPSRN 354

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA---- 153
             S     +N++I GY+  G    A+ L+  +      PD  TF  VL AC+++      
Sbjct: 355 VVS-----WNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEG 409

Query: 154 ---FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTS 209
              F E  Q HG   +M          C++   G  G + +   + +EM  E +   W S
Sbjct: 410 RRYFNEMQQGHGISPRMEH------YACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGS 463

Query: 210 LICAC 214
           L+ +C
Sbjct: 464 LLGSC 468


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/706 (33%), Positives = 390/706 (55%), Gaps = 46/706 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +++++  Y   G  ++AI ++VE    G++P+ + +  V+ AC+ S   G G    G ++
Sbjct: 134 WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193

Query: 166 KMG-FDRDVFVENCLINFY--GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
           K G F+ DV V   LI+ +  GE     +  +VFD+MSE NVV+WT +I  C +   P+E
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGE-NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+  F +MV  G + +  T+  V SACA+L+NL LG ++ ++    G+  +     +LVD
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVD 310

Query: 283 MYMKC---GAVDTAKQLFGECKDRNLVLCNTIMSNYVR-LGLAREALAILDEMLLHGP-R 337
           MY KC   G+VD  +++F   +D +++    +++ Y++   LA EA+ +  EM+  G   
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           P+  T  SA  A   L D   G+   G   + GL    S+ N++I M++K  +       
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR------- 423

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                                   +E A+  F  +  ++ +S+NT L G  +   FE+A 
Sbjct: 424 ------------------------MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           +L   +    + V   T   + S    +G++   + I++ + K G+ C+  +  AL+ M+
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           ++CG    A +VF  ME R+V +WT+ I   A  G   + +E FN+M+ +G+KP+ + +V
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            +L+ACSH GLV++GW  F SM + H + P++ HY CMVDLL RAGLL +A + I +MP 
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           + + ++W + L AC+ H N ++   AA +I ELDP +   ++ LSNIYA AGKW     +
Sbjct: 640 QADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEM 699

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R +MKE+ + K  G S IEV  K+H+F  GD +HP  + I   L  +   ++  GYVPD 
Sbjct: 700 RRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDT 759

Query: 758 TNVLLDVDEQEKKY----LLSHHSEKLAMAFGLISTSKTMPIRVVK 799
             VL  ++E+  +     LL  HSEK+A+AFGLISTSK+ P+++++
Sbjct: 760 DLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPLKMIQ 805



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 228/506 (45%), Gaps = 52/506 (10%)

Query: 61  GHKPSYISKVVCTCAQMGTF----ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCI 116
           GH   + S V   C+ +  F     S   A K FD   + N  + TL +   +  G+   
Sbjct: 196 GH---FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP-- 250

Query: 117 GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVE 176
               EAI  ++++   G   DKFT   V +AC +      G Q+H   ++ G   D  VE
Sbjct: 251 ---REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305

Query: 177 NCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARR-DLPKEAVYLFFEMVE 232
             L++ Y +C   G + D R+VFD M + +V+SWT+LI    +  +L  EA+ LF EM+ 
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365

Query: 233 EG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           +G ++PN  T      AC  L +  +G +V     + G+ +N+ + N+++ M++K   ++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A++ F    ++NLV  NT +    R     +A  +L E+          T  S +S  A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            +G +  G   H  V++ GL     +CN +I MY KCG  + A R+F+ M N+ V+SW S
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           +I G  K+G                                    +E F  M+ E +K +
Sbjct: 546 MITGFAKHG-------------------------------FAIRVLETFNQMIEEGVKPN 574

Query: 472 RVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
            VT V + SAC ++G +    +   +  E + I   M+    +VD+  R G    A +  
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634

Query: 531 RRME-KRDVSAWTAAIGAMAMEGNGE 555
             M  + DV  W   +GA  +  N E
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTE 660



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 256/544 (47%), Gaps = 46/544 (8%)

Query: 122 AISLYVELAGFGILP-DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           A+S    +A  GI P D  TF  +L +C ++  F  G  VH  +++   + D  + N LI
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104

Query: 181 NFYGECGDIVDGRRVFDEM---SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
           + Y + GD      VF+ M    +R+VVSW++++          +A+ +F E +E G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164

Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN-ALVDMYMKC-GAVDTAKQ 295
           N      VI AC+    + +G     ++ + G   + + V  +L+DM++K   + + A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F +  + N+V    +++  +++G  REA+    +M+L G   D+ T+ S  SA A+L +
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC---GKQEMACRIFDHMSNKTVVSWNSL 412
           L  G+  H + +R+GL   D +  +++DMY KC   G  +   ++FD M + +V+SW +L
Sbjct: 285 LSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVD 471
           I G +KN                               N+  EA+ LF  M+++  ++ +
Sbjct: 343 ITGYMKNC------------------------------NLATEAINLFSEMITQGHVEPN 372

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
             T      ACG L    + K +     K G+  +  +A +++ MF +    + A + F 
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            + ++++ ++   +       N EQA +L +E+  + +   +  F  +L+  ++ G + +
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAA 650
           G  +   +  + G+S        ++ +  + G +  A  +   M  E  +VI W S++  
Sbjct: 493 GEQIHSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFM--ENRNVISWTSMITG 549

Query: 651 CQKH 654
             KH
Sbjct: 550 FAKH 553



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 177/437 (40%), Gaps = 57/437 (13%)

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRMCHGY 365
           + + ++  ++  G  R A++ LD M   G RP D VT  S + +  +  D   G++ H  
Sbjct: 28  VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           ++   +E  DS+                               +NSLI+   K+GD   A
Sbjct: 88  LIEFDIEP-DSVL------------------------------YNSLISLYSKSGDSAKA 116

Query: 426 REVFSEMP---GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
            +VF  M     RD +SW+ M+          +A+++F   L   +  +      V  AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176

Query: 483 GYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDP-QRAMQVFRRMEKRDVSA 540
                + + +    ++ K G    D+ +  +L+DMF +  +  + A +VF +M + +V  
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-----WHL 595
           WT  I      G   +A+  F +M+  G + D      V +AC+    ++ G     W +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296

Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP-VEPNDVI-WGSLLAACQK 653
              + D    S        +VD+  +    G   D  K    +E + V+ W +L+    K
Sbjct: 297 RSGLVDDVECS--------LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348

Query: 654 HQNVDIAAYA--AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
           + N+   A    +E IT+   E +  H   S+ + + G  ++  RV  Q+  Q  ++   
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPN--HFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLA 405

Query: 712 SSSIEVNGKVHEFTSGD 728
           S+S   N  +  F   D
Sbjct: 406 SNSSVANSVISMFVKSD 422


>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
          Length = 515

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/537 (40%), Positives = 317/537 (59%), Gaps = 32/537 (5%)

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
             +++ Y+  G A EA+ +       G RPD  T +  ++A A++ DL  G        +
Sbjct: 10  TALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAAARQ 69

Query: 369 N-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
             G+     +    +D+Y+KCG                               ++E AR 
Sbjct: 70  EEGVAESVFVATAALDLYVKCG-------------------------------EMEKARS 98

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           VF EM  RD ++W  M+GG        EA++LF  M  E  K D  T+VG  SAC  LGA
Sbjct: 99  VFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGA 158

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           LDL +     +  + +  +  L TAL+DM+A+CG    A  VF++M +RD+  W A I  
Sbjct: 159 LDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILG 218

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
           + M G+ + A  L  +M + G+K +   F+G+L +C+H GLVN G   F +MT ++ +SP
Sbjct: 219 LGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISP 278

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
           +I HYGCMVDL  RAGLL EA  LI  MP+  N V+WG+LL  C+ H+N D+A +A +++
Sbjct: 279 RIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQL 338

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
             L+P  SG +V+LSNIY+++G+W + A++RL+MK +GI K+P SS +E++GKVH+F  G
Sbjct: 339 IRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVG 398

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           D+SHP  + I + L E+   ++  GY P    V+ DV+ +EK+  L HHSEK+A+AF LI
Sbjct: 399 DDSHPLSDKIYAKLDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLI 458

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +T     IRV KNLR+C DCHS  KL+S++  REI+VRDNNRFH FR G CSC+D+W
Sbjct: 459 TTEPGETIRVTKNLRVCTDCHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 172/371 (46%), Gaps = 34/371 (9%)

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M   + VSWT+LI A        EA+ +       G++P+S T V V++ACA++ +LE G
Sbjct: 1   MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60

Query: 259 DRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           + V A    E G+  +  +  A +D+Y+KCG ++ A+ +F E K+R+ V    ++  Y  
Sbjct: 61  EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
            G  REAL +   M + G +PD  T++ A+SA  +LG L  GR   G V  + + G   +
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
              +IDMY KCG    A  +F  M  + ++ WN++I GL               M G + 
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGL--------------GMTGHEK 226

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DLAKWIYA 496
           I                 A  L   M    +K++  T +G+  +C + G + D  ++ + 
Sbjct: 227 I-----------------AFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHN 269

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK-RDVSAWTAAIGAMAMEGNGE 555
                 I   ++    +VD+F+R G  + A Q+   M    +   W A +G   +  N +
Sbjct: 270 MTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNAD 329

Query: 556 QAVELFNEMLR 566
            A     +++R
Sbjct: 330 LAEHALKQLIR 340



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 159/326 (48%), Gaps = 13/326 (3%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +LI  Y   G  +EAI +       G+ PD FT   VL AC + +    G  V  A  
Sbjct: 9   WTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAAAR 68

Query: 166 KM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           +  G    VFV    ++ Y +CG++   R VFDEM  R+ V+W +++   A    P+EA+
Sbjct: 69  QEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREAL 128

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            LFF M  EG KP+  T+V  +SAC +L  L+LG +    +    +  N ++  AL+DMY
Sbjct: 129 DLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMY 188

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KCG+   A  +F +  +R++++ N ++      G  + A A++ +M   G + +  T +
Sbjct: 189 AKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFI 248

Query: 345 SAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
             + +    G +  GR     M H Y +   +E +      M+D++ + G  E A ++  
Sbjct: 249 GLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHY----GCMVDLFSRAGLLEEAHQLIG 304

Query: 400 HMSN-KTVVSWNSLIAG--LIKNGDV 422
            M      V W +L+ G  + +N D+
Sbjct: 305 DMPMLANAVVWGALLGGCKIHRNADL 330



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 3/218 (1%)

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           MP    +SW  ++          EA+ + R   +  ++ D  T V V +AC  +  L+  
Sbjct: 1   MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60

Query: 492 KWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
           + ++A   ++ G+   + +ATA +D++ +CG+ ++A  VF  M+ RD  AW A +G  A 
Sbjct: 61  EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G+  +A++LF  M  +G KPD    VG L+AC+  G ++ G      M     V    V
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAV-GMVHWDEVLGNPV 179

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
               ++D+  + G   EA  + + M +E + ++W +++
Sbjct: 180 LGTALIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMI 216


>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
 gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
 gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
 gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
 gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 602

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/522 (39%), Positives = 313/522 (59%), Gaps = 30/522 (5%)

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQL-GDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           A A    ML     P++ T    + A A L G    G   H   L+ G      + NT+I
Sbjct: 110 AAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLI 169

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY   G                              G +  AR VF  MP    ++W+ 
Sbjct: 170 HMYSCFG-----------------------------GGFLGDARNVFDRMPKESAVTWSA 200

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           M+GG  +  +  +A++LFR M +  ++ D VT++GV +A   LGAL+LA+W+  ++E+ G
Sbjct: 201 MIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREG 260

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFN 562
           I   + L  AL+D  A+CGD   A+ VF  M++R V +WT+ I A+AMEG G++AV +F 
Sbjct: 261 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFE 320

Query: 563 EMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRA 622
           EM   G+ PD + F+GVLTACSH G+V++G   F +M   +G+ P+I HYGCMVD+ GRA
Sbjct: 321 EMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRA 380

Query: 623 GLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLS 682
           G++  A++ +++MP++PN VIW SL++AC+ H  +++       +    P     +++LS
Sbjct: 381 GMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLS 440

Query: 683 NIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLR 742
           N++A   +W   + +R +M ++GI+K+PG S +E++G+VHEF +GDESHP+  +I  M+ 
Sbjct: 441 NVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVE 500

Query: 743 EMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           EM   LR  G++   + VLLD+DE++K+  L  HSEKLA+AF L+ T     +RVVKNLR
Sbjct: 501 EMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLR 560

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCH+  K +S+VY REI+VRD +RFH F+ GSCSC DFW
Sbjct: 561 VCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 186/383 (48%), Gaps = 23/383 (6%)

Query: 104 FMYNSLIRGYSCI---GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE-GVQ 159
           F+ N+LIR ++      L + A + +  +    ++P+KFTFPF+L AC       + G+Q
Sbjct: 89  FLANTLIRAHATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQ 148

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACAR 216
            H A +K GF  D +V N LI+ Y  C   G + D R VFD M + + V+W+++I    R
Sbjct: 149 AHAAALKFGFATDQYVSNTLIHMY-SCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVR 207

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
             L  +AV LF EM   G++ + VT++ V++A   L  LEL   V  +++  G+  +  +
Sbjct: 208 GGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTL 267

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
            NAL+D   KCG VD A  +F   + R++V   +++      G  +EA+ + +EM + G 
Sbjct: 268 CNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGV 327

Query: 337 RPDRVTMLSAVSASAQLG--DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
            PD V  +  ++A +  G  D  CG       +  G+E        M+DM+ + G  E A
Sbjct: 328 PPDDVAFIGVLTACSHAGMVDEGCGYF-DAMKVEYGIEPKIEHYGCMVDMFGRAGMVERA 386

Query: 395 CRIFDHMS-NKTVVSWNSLIAGLIKNGDVESA----REVFSEMPGRDHISWNTMLG---G 446
                 M      V W SL++    +G +E      R +  E P   H +   ML     
Sbjct: 387 MEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPA--HEANYIMLSNVFA 444

Query: 447 LTQENMFEEAMELFRVMLSERIK 469
           LTQ   ++E  E+ R M    IK
Sbjct: 445 LTQR--WKEKSEIRREMSKRGIK 465


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/598 (36%), Positives = 346/598 (57%), Gaps = 2/598 (0%)

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C K Q      ++ A I + G+     + N L+D Y KC  +  A  LF E   R+ V  
Sbjct: 12  CTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSW 71

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            +I++ Y +  L  + L+I   M      +PD     + + A A L  L  G+  H   +
Sbjct: 72  ASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFV 131

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            +     D + ++++DMY KCG   +A  +FD +  KT VSW ++++G  ++G  + A E
Sbjct: 132 LSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAME 191

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK-VDRVTMVGVASACGYLG 486
           +F   P R+  SW  ++ GL Q     +   +F  M  E +  VD + +  V  AC  L 
Sbjct: 192 LFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLA 251

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
            L L K I+  +  +G    + ++ ALVDM+A+C D   A  VF RM  RDV +WT+ I 
Sbjct: 252 VLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIV 311

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
             A  G  ++A++L+++M+   IKP+ + FVG++ ACSH GLV++G  LF++M + + +S
Sbjct: 312 GAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRIS 371

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           P +  + C +DLL R+G L EA DLIK+MP +P++  W +LL+AC+ H N ++    A+R
Sbjct: 372 PSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADR 431

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
           +  L+  +   +VLLSN+YA AGKW  ++RVR  M +  +++ PG SSI++  +   F +
Sbjct: 432 LLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHA 491

Query: 727 GDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGL 786
           G+  HP  + I  +L+E++  +R  GY+PD + VL D++EQEK+  L  HSE+ A+A+GL
Sbjct: 492 GETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGL 551

Query: 787 ISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +       IR+VKNLR+C DCH+F KL S +  +EIIVRD  R+H F+ G CSC+DFW
Sbjct: 552 LKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 218/498 (43%), Gaps = 77/498 (15%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L  CTK  A     ++H  IVK G ++   + N L++ YG+C  + D   +FDEM +R+ 
Sbjct: 9   LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68

Query: 205 VSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VSW S++ A  +  LP + + +F  M   + ++P+      ++ ACA L +L LG +V A
Sbjct: 69  VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHA 128

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
                    + ++ ++LVDMY KCG    A+ +F     +  V    ++S Y R GL  E
Sbjct: 129 RFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDE 188

Query: 324 ALAILDEMLLHGPRP------------------------------------DRVTMLSAV 347
           A+    E+ L  P                                      D + + S V
Sbjct: 189 AM----ELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVV 244

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            A A L  L  G+  HG V+ +G E    I N ++DMY KC     A  +F+ M ++ VV
Sbjct: 245 GACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVV 304

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SW S+I G  ++G                                 +EA++L+  M+   
Sbjct: 305 SWTSIIVGAAQHGRA-------------------------------KEALDLYDQMVLAE 333

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
           IK + VT VG+  AC + G +   + ++ A IE   I   +QL T  +D+ +R G    A
Sbjct: 334 IKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEA 393

Query: 527 MQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI-KPDSIVFVGVLTACS 584
             + + M  K D   W A + A    GN E  V + + +L   + +P + V +  + A +
Sbjct: 394 EDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGA 453

Query: 585 HGGLVNQGWHLFRSMTDI 602
             G   Q   + + MTD+
Sbjct: 454 --GKWEQMSRVRKLMTDM 469



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 163/371 (43%), Gaps = 43/371 (11%)

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTK 150
           +Y+ D         + S++  Y+   L  + +S++  +     L PD F +  +L AC  
Sbjct: 57  HYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACAS 116

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
             +   G QVH   V   F  D  V++ L++ Y +CG     R VFD +  +  VSWT++
Sbjct: 117 LCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAM 176

Query: 211 ICACARRDLPKEAV-------------------------------YLFFEMVEEGIK-PN 238
           +   AR  L  EA+                               Y+F EM  EG+   +
Sbjct: 177 LSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVD 236

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            + +  V+ ACA L  L LG ++   +   G ++   + NALVDMY KC  +  A+ +F 
Sbjct: 237 PLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFN 296

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
               R++V   +I+    + G A+EAL + D+M+L   +P+ VT +  + A +  G +  
Sbjct: 297 RMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSK 356

Query: 359 GR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSL 412
           GR     M   Y +   L+    +    +D+  + G    A  +   M +K    +W +L
Sbjct: 357 GRKLFKAMIEDYRISPSLQ----LFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAAL 412

Query: 413 IAGLIKNGDVE 423
           ++    +G+ E
Sbjct: 413 LSACKHHGNTE 423


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/556 (39%), Positives = 332/556 (59%), Gaps = 34/556 (6%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP--DRVTMLSAVSAS 350
           A++ F E  D N V+   + S YVR  L   +L +   M+        D    L A SAS
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           A++ D       H  + + G E    + NTM+D Y K G +                   
Sbjct: 63  ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSR------------------- 103

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS--ERI 468
                     D+E AR+VF  M  RD +SWN+M+    Q  M  EA+ L+  ML+    I
Sbjct: 104 ----------DLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGI 152

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           K + V +  V  AC + GA+   K I+  + + G+  ++ + T++VDM+++CG  + A +
Sbjct: 153 KCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASR 212

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
            FR+++++++ +W+A I    M G G++A+E+F EM R G++P+ I F+ VL ACSH GL
Sbjct: 213 AFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGL 272

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           +++G + + +M    G+   + HYGCMVDLLGRAG L EA  LIK M V+P+  IWG+LL
Sbjct: 273 LDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALL 332

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           +AC+ H+NV++A  + +R+ ELD   SG +VLLSNIYA AG W +V R+RL +K + I K
Sbjct: 333 SACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEK 392

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQE 768
            PG SS E+ GK++ F  GD+SHP+   I S L ++  R+++AGYVP+  +VL D+DE+E
Sbjct: 393 PPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEE 452

Query: 769 KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNN 828
           K+  L  HSEKLA+AF L+++     I ++KNLR+C DCH+  K ++K+ +REII+RD  
Sbjct: 453 KESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQ 512

Query: 829 RFHFFRQGSCSCSDFW 844
           RFH F+ G CSC D+W
Sbjct: 513 RFHHFKDGLCSCRDYW 528



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 183/376 (48%), Gaps = 40/376 (10%)

Query: 190 VDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV--EEGIKPNSVTMVCVIS 247
           +D RR FDE+ + N V  T++     R +L   ++ LF  M+  +     +    +   S
Sbjct: 1   MDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFS 60

Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD--TAKQLFGECKDRNL 305
           A A++ +  +   + A I ++G + NA +VN ++D Y K G+ D   A+++F +  +R++
Sbjct: 61  ASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVF-DTMERDV 119

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLL--HGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
           V  N++++ Y + G++ EA+ +  +ML    G + + V + + + A A  G +  G+  H
Sbjct: 120 VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIH 179

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
             V+R GLE    +  +++DMY KCG+ EMA R F  +  K ++SW+++I G   +G  +
Sbjct: 180 NQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQ 239

Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
            A E+F+EM                                   ++ + +T + V +AC 
Sbjct: 240 EALEIFTEMK-------------------------------RSGLRPNYITFISVLAACS 268

Query: 484 YLGALDLAK-WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
           + G LD  + W  A  ++ GI   ++    +VD+  R G    A  + + M+ K D + W
Sbjct: 269 HAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIW 328

Query: 542 TAAIGAMAMEGNGEQA 557
            A + A  +  N E A
Sbjct: 329 GALLSACRIHKNVELA 344



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 152/287 (52%), Gaps = 7/287 (2%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG--DIVDGRRVFDEMSER 202
            +A  +    G    +H  I K+GF+R+  V N +++ Y + G  D+   R+VFD M ER
Sbjct: 59  FSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ER 117

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEM--VEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +VVSW S+I   A+  +  EA+ L+ +M  V  GIK N+V +  V+ ACA    ++ G  
Sbjct: 118 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKH 177

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           +   +  +G++ N  +  ++VDMY KCG V+ A + F + K++N++  + +++ Y   G 
Sbjct: 178 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 237

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICN 379
            +EAL I  EM   G RP+ +T +S ++A +  G L  GR  +  + +  G+E       
Sbjct: 238 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 297

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVESA 425
            M+D+  + G  + A  +   M  K   + W +L++    + +VE A
Sbjct: 298 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELA 344



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 10/253 (3%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H  I K G       ++ ++ + A+ G+   L  A+K FD   +D      +  +NS+I 
Sbjct: 75  HALIAKIGFERNAGVVNTMLDSYAKGGS-RDLEVARKVFDTMERD------VVSWNSMIA 127

Query: 112 GYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
            Y+  G+  EAI LY ++   G GI  +      VL AC  + A   G  +H  +V+MG 
Sbjct: 128 LYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGL 187

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           + +V+V   +++ Y +CG +    R F ++ E+N++SW+++I         +EA+ +F E
Sbjct: 188 EENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTE 247

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDR-VCAYIDELGMKANALMVNALVDMYMKCG 288
           M   G++PN +T + V++AC+    L+ G     A   E G++A       +VD+  + G
Sbjct: 248 MKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAG 307

Query: 289 AVDTAKQLFGECK 301
            +D A  L  E K
Sbjct: 308 CLDEAYSLIKEMK 320


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/649 (36%), Positives = 357/649 (55%), Gaps = 42/649 (6%)

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +    SW + +   AR+   +EA+ L+ +M+  G  PN+ T      +CA L     G +
Sbjct: 18  QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK-DRNLVLC-NTIMSNYVRL 318
           +  ++ + G +    +  +L+ MY KC  + +A+++F E    RNL +C N +++ Y   
Sbjct: 78  LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
               +A+ +  +M   G   + VTML  +   A    L  G   H   +R GL+G  S+ 
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N ++ MY++CG                                V+ AR++F  MP +  I
Sbjct: 198 NCLLTMYVRCG-------------------------------SVDFARKLFDGMPEKGLI 226

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +WN M+ G  Q  +    ++L+R M    I  D VT+VGV S+C +LGA    + +   I
Sbjct: 227 TWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRI 286

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
           E +G   +  L  AL++M+ARCG+  +A  +F  M +++V +WTA I    M G GE AV
Sbjct: 287 ELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAV 346

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           +LF+EM+     PD   FV VL+ACSH GL  +G + F +M   +G+ P   HY C+VDL
Sbjct: 347 QLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDL 406

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           LGRAG L EA  LI SM VEP+  +WG+LL AC+ H+NV++A  A E++ E +P   G +
Sbjct: 407 LGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYY 466

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLLSNI++ AG    + RVR+ M+E+ ++K PG S +E  G++H F +GD +HP+   I 
Sbjct: 467 VLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIY 526

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH---HSEKLAMAFGLISTSKTMPI 795
            ML  +   ++  G   D      +  E   + L++    HSEKLA+AFGLI+T     I
Sbjct: 527 HMLDGLEDIIKRRGGSND------NDQESRNEELITGMGVHSEKLAIAFGLINTEPGTEI 580

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            V+KNLR+C DCH F KLVS++ DR+++VRD  RFH F+ G CSC D+W
Sbjct: 581 TVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 241/503 (47%), Gaps = 37/503 (7%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           +T     F Y  K  +   T   +N+ +R  +      EA++LY ++   G  P+ FTFP
Sbjct: 1   MTRPHPLFPYANKWLDLQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFP 60

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE-MSE 201
           F   +C   S    G Q+HG ++K G + + FV+  LI+ Y +C  I   R+VFDE    
Sbjct: 61  FAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHS 120

Query: 202 RNV-VSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           RN+ V + +LI   +      +AV LF +M +EG+  N+VTM+ +I  CA   +L  G  
Sbjct: 121 RNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTS 180

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           + A     G+  +  + N L+ MY++CG+VD A++LF    ++ L+  N ++S Y + GL
Sbjct: 181 LHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGL 240

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
           A   L +  +M   G  PD VT++  +S+ A LG    GR     +  +G      + N 
Sbjct: 241 AGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNA 300

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           +I+MY +CG    A  IFD M+ K V+SW ++IAG   +G  E A ++F EM   D +  
Sbjct: 301 LINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELP- 359

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
                                         D    V V SAC + G  +   + +  +E+
Sbjct: 360 ------------------------------DGAAFVSVLSACSHAGLTEKGLYYFTAMER 389

Query: 501 N-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAV 558
           + G+    +  + +VD+  R G  + A ++   M  + D + W A +GA  +  N E A 
Sbjct: 390 DYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAE 449

Query: 559 ELFNEMLRQGIKPDSIVFVGVLT 581
             F +++    +P +I +  +L+
Sbjct: 450 LAFEKVIE--FEPTNIGYYVLLS 470



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 210/445 (47%), Gaps = 29/445 (6%)

Query: 38  SLKNCKTLN---ELKQPHCHILKQGLGHKPSYISKVV---CTCAQMGTFESLTYAQKAFD 91
           + K+C +L+      Q H H++K G   +P   + ++   C C+ + +      A+K FD
Sbjct: 62  AFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIAS------ARKVFD 115

Query: 92  YYIKDNETSATLFM-YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
               +N  S  L + YN+LI GYS      +A+ L+ ++   G+  +  T   ++  C  
Sbjct: 116 ----ENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAG 171

Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
               G G  +H   V+ G D D+ V NCL+  Y  CG +   R++FD M E+ +++W ++
Sbjct: 172 PIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAM 231

Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
           I   A+  L    + L+ +M   GI P+ VT+V V+S+CA L     G  V   I+  G 
Sbjct: 232 ISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGF 291

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
             N  + NAL++MY +CG +  A+ +F    ++N++    I++ Y   G    A+ + DE
Sbjct: 292 GFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDE 351

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMY 385
           M+     PD    +S +SA +  G    G      M   Y L+ G E +  +    +D+ 
Sbjct: 352 MISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCV----VDLL 407

Query: 386 MKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD--HISWNT 442
            + G+ E A ++   MS       W +L+     + +VE A   F ++   +  +I +  
Sbjct: 408 GRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYV 467

Query: 443 MLGGLTQENMFEEAMELFRVMLSER 467
           +L  +  E    E +   RVM+ ER
Sbjct: 468 LLSNIFSEAGNMEGILRVRVMMRER 492


>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
 gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g22410, mitochondrial; Flags: Precursor
 gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
 gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
 gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
 gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
          Length = 681

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/598 (36%), Positives = 347/598 (58%), Gaps = 5/598 (0%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           Q+   ++  G   D F  + LI F    E   +    ++   +   N+ SW   I   + 
Sbjct: 71  QIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSE 130

Query: 217 RDLPKEAVYLFFEMVEEGI---KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            + PKE+  L+ +M+  G    +P+  T   +   CA L+   LG  +  ++ +L ++  
Sbjct: 131 SENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELV 190

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
           + + NA + M+  CG ++ A+++F E   R+LV  N +++ Y ++G A +A+ +   M  
Sbjct: 191 SHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES 250

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G +PD VTM+  VS+ + LGDL  G+  + YV  NGL     + N ++DM+ KCG    
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
           A RIFD++  +T+VSW ++I+G  + G ++ +R++F +M  +D + WN M+GG  Q    
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           ++A+ LF+ M +   K D +TM+   SAC  LGALD+  WI+ YIEK  +  ++ L T+L
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           VDM+A+CG+   A+ VF  ++ R+   +TA IG +A+ G+   A+  FNEM+  GI PD 
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDE 490

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           I F+G+L+AC HGG++  G   F  M     ++PQ+ HY  MVDLLGRAGLL EA  L++
Sbjct: 491 ITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLME 550

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           SMP+E +  +WG+LL  C+ H NV++   AA+++ ELDP  SG++VLL  +Y  A  W +
Sbjct: 551 SMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWED 610

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             R R  M E+G+ K+PG SSIEVNG V EF   D+S PE   I   L  +   +R +
Sbjct: 611 AKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSS 668



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 263/573 (45%), Gaps = 80/573 (13%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           +P +  L+ CK L  LKQ    ++  GL   P   S+++  CA            +  DY
Sbjct: 54  NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCA--------LSESRYLDY 105

Query: 93  YIK--DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL---PDKFTFPFVLNA 147
            +K      +  +F +N  IRG+S      E+  LY ++   G     PD FT+P +   
Sbjct: 106 SVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKV 165

Query: 148 CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
           C        G  + G ++K+  +    V N  I+ +  CGD+ + R+VFDE   R++VSW
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSW 225

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
             LI    +    ++A+Y++  M  EG+KP+ VTM+ ++S+C+ L +L  G     Y+ E
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL------- 320
            G++    +VNAL+DM+ KCG +  A+++F   + R +V   T++S Y R GL       
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345

Query: 321 ------------------------AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
                                    ++ALA+  EM     +PD +TM+  +SA +QLG L
Sbjct: 346 FDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G   H Y+ +  L    ++  +++DMY KCG    A  +F  +  +  +++ ++I GL
Sbjct: 406 DVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGL 465

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
             +GD  +A   F+E                               M+   I  D +T +
Sbjct: 466 ALHGDASTAISYFNE-------------------------------MIDAGIAPDEITFI 494

Query: 477 GVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME- 534
           G+ SAC + G +   +  ++ ++ +  ++  ++  + +VD+  R G  + A ++   M  
Sbjct: 495 GLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPM 554

Query: 535 KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           + D + W A +    M GN   GE+A +   E+
Sbjct: 555 EADAAVWGALLFGCRMHGNVELGEKAAKKLLEL 587



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 196/422 (46%), Gaps = 50/422 (11%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A+K FD           L  +N LI GY  IG   +AI +Y  +   G+ PD  T   ++
Sbjct: 210 ARKVFD-----ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           ++C+       G + +  + + G    + + N L++ + +CGDI + RR+FD + +R +V
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324

Query: 206 SWTSLICACAR-------RDL------------------------PKEAVYLFFEMVEEG 234
           SWT++I   AR       R L                         ++A+ LF EM    
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
            KP+ +TM+  +SAC++L  L++G  +  YI++  +  N  +  +LVDMY KCG +  A 
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            +F   + RN +    I+      G A  A++  +EM+  G  PD +T +  +SA    G
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504

Query: 355 DLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVS 408
            +  GR     M   + L   L+ +    + M+D+  + G  E A R+ + M  +     
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHY----SIMVDLLGRAGLLEEADRLMESMPMEADAAV 560

Query: 409 WNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           W +L+ G   +G+V   E A +   E+   D   +  + G   + NM+E+A    R M++
Sbjct: 561 WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRA-RRMMN 619

Query: 466 ER 467
           ER
Sbjct: 620 ER 621


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/679 (35%), Positives = 359/679 (52%), Gaps = 42/679 (6%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           + D      +F +  +I G +  GL  +    + E+   GILPDKF +  ++ +C    +
Sbjct: 177 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 236

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G  VH  IV  GF   +FV   L+N Y + G I D   VF+ M+E N VSW ++I  
Sbjct: 237 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 296

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           C    L  EA  LF  M      PN  T+V V  A  KL ++ +G  V     ELG++ N
Sbjct: 297 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 356

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC------NTIMSNYVRLGLAREALAI 327
            L+  AL+DMY KCG++  A+ +F    D N + C      N ++S Y + G ++EAL +
Sbjct: 357 VLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCSQEALEL 412

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYM 386
             +M  +G   D  T  S  +A A    L  GR+ HG VL+ GL+    S+ N + D Y 
Sbjct: 413 YVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYS 472

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG                                +E  R+VF  M  RD +SW T++  
Sbjct: 473 KCGF-------------------------------LEDVRKVFDRMEERDIVSWTTLVTA 501

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
            +Q ++ EEA+  F +M  E    ++ T   V  +C  L  L+  + ++  + K G+  +
Sbjct: 502 YSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTE 561

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             + +AL+DM+A+CG    A +VF ++   D+ +WTA I   A  G  E A++LF  M  
Sbjct: 562 KCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMEL 621

Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
            GIK +++  + VL ACSHGG+V +G   F+ M D +GV P++ HY C++DLLGR G L 
Sbjct: 622 SGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLD 681

Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYA 686
           +A++ I+ MP+EPN+++W +LL  C+ H NV++   AA +I  + PE S  +VLLSN Y 
Sbjct: 682 DAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYI 741

Query: 687 SAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNC 746
             G + +   +R  MK+QG++K PG S I V G+VH+F SGD+ HP+   I   L E+  
Sbjct: 742 ETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELRE 801

Query: 747 RLRDAGYVPDLTNVLLDVD 765
           +++  GYVPDL  VL + D
Sbjct: 802 KIKAMGYVPDLRYVLNNAD 820



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 247/529 (46%), Gaps = 55/529 (10%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           +++C  L+ L   K  H  I+ +G        + ++   A++G+ E          Y++ 
Sbjct: 228 IQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIED--------SYWVF 279

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           +  T      +N++I G +  GL +EA  L+V +      P+ +T   V  A  K     
Sbjct: 280 NMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVN 339

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS------WTS 209
            G +V     ++G + +V V   LI+ Y +CG + D R VFD     N ++      W +
Sbjct: 340 MGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFD----TNFINCGVNTPWNA 395

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I   ++    +EA+ L+ +M + GI  +  T   V +A A  ++L+ G  V   + + G
Sbjct: 396 MISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCG 455

Query: 270 MKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
           +    + V NA+ D Y KCG ++  +++F   ++R++V   T+++ Y +  L  EALA  
Sbjct: 456 LDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATF 515

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             M   G  P++ T  S + + A L  L  GR  HG + + GL+    I + +IDMY KC
Sbjct: 516 CLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKC 575

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G    A ++FD +SN  +VSW ++I+G  ++G                            
Sbjct: 576 GSITEAGKVFDKISNPDIVSWTAIISGYAQHG---------------------------- 607

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDM 507
              + E+A++LFR M    IK + VT++ V  AC + G ++   + +  +E   G+  +M
Sbjct: 608 ---LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEM 664

Query: 508 QLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
           +    ++D+  R G    AM+  R+M  + +   W   +G   + GN E
Sbjct: 665 EHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE 713



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/575 (25%), Positives = 250/575 (43%), Gaps = 44/575 (7%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGF-DRDVFV-ENCLINFYGECGDIVDGRRVFDEMSE 201
           VL  C +  +  E   VHG ++K  F D+D+ V  N   + Y +C +      VFDEM +
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           RNV SWT +I       L  +    F EM+  GI P+      +I +C  L +LELG  V
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A I   G   +  +  +L++MY K G+++ +  +F    + N V  N ++S     GL 
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EA  +   M      P+  T++S   A  +L D+  G+         G+EG   +   +
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 363

Query: 382 IDMYMKCGKQEMACRIFD--HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           IDMY KCG    A  +FD   ++      WN++I+G                        
Sbjct: 364 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG------------------------ 399

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
                   +Q    +EA+EL+  M    I  D  T   V +A     +L   + ++  + 
Sbjct: 400 -------YSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 452

Query: 500 KNGIHCDMQLAT---ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           K G+  D+ + +   A+ D +++CG  +   +VF RME+RD+ +WT  + A +    GE+
Sbjct: 453 KCGL--DLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEE 510

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A+  F  M  +G  P+   F  VL +C+    +  G  +   +    G+  +      ++
Sbjct: 511 ALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKA-GLDTEKCIESALI 569

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
           D+  + G + EA  +   +   P+ V W ++++   +H  V+ A     R+ EL   K+ 
Sbjct: 570 DMYAKCGSITEAGKVFDKIS-NPDIVSWTAIISGYAQHGLVEDALQLFRRM-ELSGIKAN 627

Query: 677 VHVLLSNIYA-SAGKWTNVARVRLQMKEQGIRKLP 710
              LL  ++A S G          Q  E G   +P
Sbjct: 628 AVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVP 662


>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/539 (41%), Positives = 319/539 (59%), Gaps = 39/539 (7%)

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
           NT++  Y R    REA+ +   M+  G   P+  T    +++ A+L  L  G   H +++
Sbjct: 3   NTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHII 62

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           ++G E    + N +I +Y           +F                     G++  AR 
Sbjct: 63  KHGFESDLFVRNALIHLY----------SVF---------------------GNLNLART 91

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +F E   RD +S+NTM+ G  + N  E A+ LF     E    D VT+V V SAC  LGA
Sbjct: 92  LFDESLVRDLVSYNTMIKGYAEVNQPESALCLF----GEMQNSDEVTLVAVLSACARLGA 147

Query: 488 LDLAKWIY-AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEK--RDVSAWTAA 544
            DL K +Y  YIE    + +  L  A++DM+A+CG    A+++FRR+ K  +    + + 
Sbjct: 148 FDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSM 207

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I  +A  G GE A+ +F E++  G+KPD + FVGVL AC H GL+ +G  LF SM + +G
Sbjct: 208 IAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYG 267

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + PQ+ HYGCMVDLLGR G L EA DL++ MP E N VIW +LL+AC+ H NV I   A 
Sbjct: 268 IKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAG 327

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           +++ E++ +    +VLLSNI A A +W    +VR  M++ GIRK PG S IE+ G +H F
Sbjct: 328 QKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRF 387

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            + D+SHP+   I  ML++M  RL+ AGYVP+   V+ D+DE+EK+ ++S+HSEKLA+AF
Sbjct: 388 VASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAF 447

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           GL+  S T  IR+VKNLR+C DCH   KLVS++Y REI VRD  RFH FR GSCSC DF
Sbjct: 448 GLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDF 506



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 200/379 (52%), Gaps = 23/379 (6%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILP-DKFTFPFVLNACTKSSAFGEGVQVHGA 163
           M+N++IRGYS      EAI LY+ +   GI P + FTFPF+LN+C + S+   G +VH  
Sbjct: 1   MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           I+K GF+ D+FV N LI+ Y   G++   R +FDE   R++VS+ ++I   A  + P+ A
Sbjct: 61  IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 120

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVD 282
           + LF EM       + VT+V V+SACA+L   +LG R+   YI+      N ++  A++D
Sbjct: 121 LCLFGEMQ----NSDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMD 176

Query: 283 MYMKCGAVDTAKQLF---GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           MY KCG++D+A ++F   G+      V  N++++   + GL   A+ +  E++  G +PD
Sbjct: 177 MYAKCGSIDSALEIFRRVGKNMKTGFVF-NSMIAGLAQHGLGETAITVFRELISTGLKPD 235

Query: 340 RVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
            VT +  + A    G +  G+     M + Y ++  +E +      M+D+  + G  E A
Sbjct: 236 EVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHY----GCMVDLLGRYGCLEEA 291

Query: 395 CRIFDHMS-NKTVVSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQE 450
             +   M      V W +L++    +G+V   E A +   EM  +    +  +   L   
Sbjct: 292 YDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADA 351

Query: 451 NMFEEAMELFRVMLSERIK 469
           N +EEA ++ +VM    I+
Sbjct: 352 NQWEEARQVRKVMEDHGIR 370



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 19/265 (7%)

Query: 39  LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           L +C  L+ L+   + H HI+K G      ++   +     +  F +L  A+  FD  + 
Sbjct: 42  LNSCARLSSLEPGHEVHSHIIKHGF-ESDLFVRNALIHLYSV--FGNLNLARTLFDESLV 98

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            +  S     YN++I+GY+ +     A+ L+ E+       D+ T   VL+AC +  AF 
Sbjct: 99  RDLVS-----YNTMIKGYAEVNQPESALCLFGEMQN----SDEVTLVAVLSACARLGAFD 149

Query: 156 EGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSE--RNVVSWTSLIC 212
            G +++   ++ G F+++  +   +++ Y +CG I     +F  + +  +    + S+I 
Sbjct: 150 LGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIA 209

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMK 271
             A+  L + A+ +F E++  G+KP+ VT V V+ AC     +E G ++  +  +  G+K
Sbjct: 210 GLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIK 269

Query: 272 ANALMVNALVDMYMKCGAVDTAKQL 296
                   +VD+  + G ++ A  L
Sbjct: 270 PQMEHYGCMVDLLGRYGCLEEAYDL 294



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 103/217 (47%), Gaps = 6/217 (2%)

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERI-KVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           WNTM+ G ++ +   EA+ L+  M+++ I   +  T   + ++C  L +L+    ++++I
Sbjct: 2   WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            K+G   D+ +  AL+ +++  G+   A  +F     RD+ ++   I   A     E A+
Sbjct: 62  IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
            LF EM       D +  V VL+AC+  G  + G  L+    +    +   +    ++D+
Sbjct: 122 CLFGEMQNS----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177

Query: 619 LGRAGLLGEALDLIKSMPVE-PNDVIWGSLLAACQKH 654
             + G +  AL++ + +        ++ S++A   +H
Sbjct: 178 YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQH 214



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 2/147 (1%)

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
            + T A M  +        A + + +  +   T F++NS+I G +  GLG  AI+++ EL
Sbjct: 168 TILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFREL 227

Query: 130 AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGD 188
              G+ PD+ TF  VL AC  S    EG ++  ++    G    +    C+++  G  G 
Sbjct: 228 ISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGC 287

Query: 189 IVDGRRVFDEMS-ERNVVSWTSLICAC 214
           + +   +  +M  E N V W +L+ AC
Sbjct: 288 LEEAYDLVQKMPFEANSVIWRALLSAC 314


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/668 (34%), Positives = 376/668 (56%), Gaps = 17/668 (2%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N +++ Y   G   + R++FDEM ERN+VSW  L+    +  + +EA  +F  M E    
Sbjct: 52  NSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPER--- 108

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            N V+   ++    +   +   + +   + E    +  +M   L+D     G +D A++L
Sbjct: 109 -NVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLID----GGRIDDARKL 163

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           +     +++V    ++    R G   EA  I DEM       + +T  + ++   Q   +
Sbjct: 164 YDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMR----ERNVITWTTMITGYGQNKRV 219

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
              R     +       W S    M+  Y   G+ E A   F+ M  K V++ N++I  L
Sbjct: 220 DVARKLFEVMPEKTEVSWTS----MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVAL 275

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            + G++  AR VF +M  RD+ +W  M+    ++    EA+ELF  M  + ++    +++
Sbjct: 276 GEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLI 335

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            + S C  L +L   + ++A++ +     D+ +A+ L+ M+ +CG+  +A  VF R   +
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSK 395

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D+  W + I   A  G GE+A+++F+EM   G  P+ +  + +LTACS+GG + +G  +F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIF 455

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
            SM     V+P + HY C VD+LGRAG + +A++LI SM ++P+  +WG+LL AC+ H  
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSR 515

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
           +D+A  AA+++ E++PE +G ++LLS+I AS  KW +VA +R  M+ + + K PG S IE
Sbjct: 516 LDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIE 575

Query: 717 VNGKVHEFTSGD-ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           V  KVH FT G   +HPE   I  ML + +  LR+AGY PD ++VL DVDE+EK   LS 
Sbjct: 576 VGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSE+LA+A+GL+   + +PIRV+KNLR+C DCH+  KL+SKV +REII+RD NRFH F  
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695

Query: 836 GSCSCSDF 843
           G CSC D+
Sbjct: 696 GECSCRDY 703



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 215/501 (42%), Gaps = 101/501 (20%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAG-------------------------FGILPDKFT 140
           +NS++ GY   GL  EA  ++ E+                           F I+P++  
Sbjct: 51  WNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNV 110

Query: 141 FPFVL------------------------NACTKSSAFG---EGVQVHGA--IVKMGFDR 171
             +                          N  + +  FG   +G ++  A  +  M   +
Sbjct: 111 VSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGK 170

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA---RRDLPKEAVYLFF 228
           DV     +I      G + + R +FDEM ERNV++WT++I       R D+ ++     F
Sbjct: 171 DVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARK----LF 226

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           E++ E  + +  +M+   +   ++++ E       + + + MK   +  NA++    + G
Sbjct: 227 EVMPEKTEVSWTSMLLGYTLSGRIEDAE------EFFEVMPMKP-VIACNAMIVALGEVG 279

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +  A+++F + +DR+      ++  Y R G   EAL +  +M   G RP   +++S +S
Sbjct: 280 EIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILS 339

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
             A L  L  GR  H +++R   +G   + + ++ MY+KCG+   A  +FD   +K ++ 
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIM 399

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           WNS+I+G   +G  E A +VF EMP          L G                      
Sbjct: 400 WNSIISGYASHGLGEEALKVFHEMP----------LSGTMP------------------- 430

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAM 527
             ++VT++ + +AC Y G L+    I+  +E K  +   ++  +  VDM  R G   +AM
Sbjct: 431 --NKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAM 488

Query: 528 QVFRRME-KRDVSAWTAAIGA 547
           ++   M  K D + W A +GA
Sbjct: 489 ELINSMTIKPDATVWGALLGA 509



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 185/431 (42%), Gaps = 82/431 (19%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM----------LLHG 335
           + G ++ A++ F   + + +   N+I+S Y   GL REA  + DEM          L+ G
Sbjct: 29  RIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSG 88

Query: 336 -----------------PRPDRVTMLSAVSASAQLG-----DLLCGRMCHGYVLRNGLEG 373
                            P  + V+  + V    Q G     +LL  RM      RN +  
Sbjct: 89  YIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPE----RNEV-S 143

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
           W  +   +ID     G+ + A +++D M  K VV+  ++I GL + G V+ ARE+F EM 
Sbjct: 144 WTVMFGGLID----GGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMR 199

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
            R+ I+W TM+ G  Q    + A +LF VM  E+ +V   +M+   +  G +   D  ++
Sbjct: 200 ERNVITWTTMITGYGQNKRVDVARKLFEVM-PEKTEVSWTSMLLGYTLSGRIE--DAEEF 256

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
                 K  I C+     A++      G+  +A +VF +ME RD + W   I A   +G 
Sbjct: 257 FEVMPMKPVIACN-----AMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGF 311

Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW----HLFRSMTD----IHGV 605
             +A+ELF +M RQG++P     + +L+ C+    +  G     HL R   D    +  V
Sbjct: 312 ELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASV 371

Query: 606 ----------------------SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---PN 640
                                 S  I+ +  ++      GL  EAL +   MP+    PN
Sbjct: 372 LMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPN 431

Query: 641 DVIWGSLLAAC 651
            V   ++L AC
Sbjct: 432 KVTLIAILTAC 442



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 27/303 (8%)

Query: 69  KVVCTCAQM----GTFESLTYAQKAFDYYI-KDNETSATLFMYNSLIRGYSCIGLGVEAI 123
           K V  C  M    G    +  A++ FD    +DN T      +  +I+ Y   G  +EA+
Sbjct: 263 KPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNAT------WRGMIKAYERKGFELEAL 316

Query: 124 SLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
            L+ ++   G+ P   +   +L+ C   ++   G QVH  +V+  FD DV+V + L+  Y
Sbjct: 317 ELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMY 376

Query: 184 GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
            +CG++V  + VFD    ++++ W S+I   A   L +EA+ +F EM   G  PN VT++
Sbjct: 377 VKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLI 436

Query: 244 CVISACAKLQNLELGDRVCAYID-ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
            +++AC+    LE G  +   ++ +  +       +  VDM  + G VD A +L      
Sbjct: 437 AILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTI 496

Query: 303 RN--------LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS-AQL 353
           +         L  C T    + RL LA  A   L E+      P    +LS+++AS ++ 
Sbjct: 497 KPDATVWGALLGACKT----HSRLDLAEVAAKKLFEIEPENAGP--YILLSSINASRSKW 550

Query: 354 GDL 356
           GD+
Sbjct: 551 GDV 553


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/569 (39%), Positives = 346/569 (60%), Gaps = 32/569 (5%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A++LF +  + N +  N ++S YV+ G+  EA  + D+M    P  + V+  + +    Q
Sbjct: 13  ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM----PERNVVSWTAMIRGYVQ 68

Query: 353 LG-----DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
            G     +LL  RM    V+      W      M+   ++ G+ + A ++FD M  K VV
Sbjct: 69  EGLIEEAELLFWRMPERNVV-----SW----TVMLGGLIEDGRVDEARQLFDMMPVKDVV 119

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG------------LTQENMFE- 454
           +  ++I GL   G +  ARE+F EMP R+ ++W +M+ G            + +   FE 
Sbjct: 120 ASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFEL 179

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           EA+ LF +M  E ++    +++ V S CG L +LD  + +++ + ++    D+ +++ L+
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLI 239

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            M+ +CGD   A +VF R   +D+  W + I   A  G GE+A+E+F++M    I PD I
Sbjct: 240 TMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEI 299

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+GVL+ACS+ G V +G  +F SM   + V P+  HY CMVDLLGRAG L EA++LI++
Sbjct: 300 TFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIEN 359

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MPVE + ++WG+LL AC+ H+N+D+A  AA+++ +L+P  +G ++LLSN+Y+S  +W +V
Sbjct: 360 MPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDV 419

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFT-SGDESHPEMNNISSMLREMNCRLRDAGY 753
             +R  M+ + +RK PG S IEV+ KVH F+  G  SHPE   I   L ++   LR+AGY
Sbjct: 420 VELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGY 479

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
            PD + V+ DVDE+EK + L  HSEKLA+A+GL+   + MPIRV+KNLR+C D HS  KL
Sbjct: 480 CPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKL 539

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
           +++V  REII+RD NRFH F+ G CSCSD
Sbjct: 540 IAQVTGREIILRDTNRFHHFKDGLCSCSD 568



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 174/386 (45%), Gaps = 54/386 (13%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N L++ Y + G I + R+VFD+M ERNVVSWT++I    +  L +EA  LF+ M E  + 
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVV 88

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
             +V +  +I      +  +L D +           + +    ++D     G +  A+++
Sbjct: 89  SWTVMLGGLIEDGRVDEARQLFDMMPV--------KDVVASTNMIDGLCSEGRLIEAREI 140

Query: 297 FGECKDRNLVLCNTIMSN-------------YVRLGLAREALAILDEMLLHGPRPDRVTM 343
           F E   RN+V   +++S              Y R G   EALA+   M   G RP   ++
Sbjct: 141 FDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSV 200

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
           +S +S    L  L  GR  H  ++R+  +    + + +I MY+KCG    A R+FD  S+
Sbjct: 201 ISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSS 260

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K +V WNS+IAG  ++G        F E                       +A+E+F  M
Sbjct: 261 KDIVMWNSIIAGYAQHG--------FGE-----------------------KALEVFHDM 289

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGD 522
            S  I  D +T +GV SAC Y G +     I+  ++ K  +    +    +VD+  R G 
Sbjct: 290 FSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGK 349

Query: 523 PQRAMQVFRRME-KRDVSAWTAAIGA 547
              AM +   M  + D   W A +GA
Sbjct: 350 LNEAMNLIENMPVEADAIVWGALLGA 375



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 166/359 (46%), Gaps = 50/359 (13%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           ++ A+K FD   + N  S     + ++IRGY   GL  EA  L+  +    ++    ++ 
Sbjct: 41  ISEARKVFDKMPERNVVS-----WTAMIRGYVQEGLIEEAELLFWRMPERNVV----SWT 91

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +L    +     E  Q    +  M   +DV     +I+     G +++ R +FDEM +R
Sbjct: 92  VMLGGLIEDGRVDEARQ----LFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQR 147

Query: 203 NVVSWTSLICA-------------CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
           NVV+WTS+I                 R+    EA+ LF  M  EG++P+  +++ V+S C
Sbjct: 148 NVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVC 207

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
             L +L+ G +V + +       +  + + L+ MY+KCG + TAK++F     +++V+ N
Sbjct: 208 GSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWN 267

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           +I++ Y + G   +AL +  +M      PD +T +  +SA +  G            ++ 
Sbjct: 268 SIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGK-----------VKE 316

Query: 370 GLEGWDSICNT------------MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
           GLE ++S+ +             M+D+  + GK   A  + ++M      + W +L+  
Sbjct: 317 GLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGA 375



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 39/291 (13%)

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y +  +   A ++FD M     +SWN L++G ++NG +  AR+VF +MP R+ +SW  M+
Sbjct: 4   YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMI 63

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL--GALDLAKWIYAYIEKNG 502
            G  QE + EEA  LF  M  ER  V    M+G     G +  G +D A+ ++  +    
Sbjct: 64  RGYVQEGLIEEAELLFWRM-PERNVVSWTVMLG-----GLIEDGRVDEARQLFDMMPVK- 116

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE------- 555
              D+  +T ++D     G    A ++F  M +R+V AWT+ I     +G          
Sbjct: 117 ---DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYE 173

Query: 556 ------QAVELFNEMLRQGIKPDSIVFVGVLTAC------SHGGLVNQGWHLFRSMTDIH 603
                 +A+ LF+ M R+G++P     + VL+ C       HG  V+    L RS  DI 
Sbjct: 174 RKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHS--QLVRSQFDI- 230

Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
                I     ++ +  + G L  A  +      + + V+W S++A   +H
Sbjct: 231 ----DIYVSSVLITMYIKCGDLVTAKRVFDRFSSK-DIVMWNSIIAGYAQH 276


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 254/824 (30%), Positives = 424/824 (51%), Gaps = 66/824 (8%)

Query: 30  PKDSPSIGSLKNCKTLNELKQP---HCHILKQGLGHKPSYISKVV-----CTCAQMGTFE 81
           P +     +L++C  L E          + K G    P   S ++     C C Q     
Sbjct: 114 PNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQ----- 168

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
               A + F+Y    +  S T+ M +S +      G   +A+ LY  +   G+ P++FTF
Sbjct: 169 ---EAYRVFEYMNNGDIVSWTM-MVSSFVEA----GSWSQALQLYHRMIQTGVAPNEFTF 220

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L A +       G  VH  ++    + ++ ++  L++ Y +C  I D  +V     E
Sbjct: 221 VKLL-AASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLE 279

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
            +V  WT++I    +    +EA+  F EM   G+ PN+ T   +++AC+ +  L+LG ++
Sbjct: 280 YDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQI 339

Query: 262 CAYIDELGMKANALMVNALVDMYMKCG-AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
            + +   G++ +  + N+LVDMYMKC   ++ A + F      N++   ++++ +   GL
Sbjct: 340 HSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGL 399

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             E++ +   M   G RP+  T+ + + A   +  L   R  HGY+++N  +    + N 
Sbjct: 400 EEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNA 459

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
           ++D Y                            AGL   G V+ A  V S M  RD I++
Sbjct: 460 LVDAY----------------------------AGL---GMVDDAWHVTSMMKHRDVITY 488

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
            ++   + Q    E A+ +   M  + +++D  ++    SA   +  ++  K ++ Y  K
Sbjct: 489 TSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVK 548

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           +G+   + ++  LVD++ +CG    A + F  + + D  +W   I  +A  G+   A+  
Sbjct: 549 SGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSA 608

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
           F +M   G++PD I  + VL ACSHGGLV+ G   F+SM + HG+ PQ+ HY C+VDLLG
Sbjct: 609 FEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLG 668

Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
           RAG L EA+++I++MP +P+ +I+ +LL AC+ H N+ +  + A +  ELDP     +VL
Sbjct: 669 RAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVL 728

Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
           L+N+Y  +G+     + R  M+E+G+RK PG S +E    VH FT+GD SHP++  I   
Sbjct: 729 LANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEK 788

Query: 741 LREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
           +  +  + R+ G           +  QE +  L+HHSEKLA+AFGLIST    PIR++KN
Sbjct: 789 IESLIAQFRNQG-----------IWYQENR-ALAHHSEKLAVAFGLISTPPKAPIRIIKN 836

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +R+C DCH F   V+++ DREIIVRD NRFH F++G CSC  +W
Sbjct: 837 IRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 270/572 (47%), Gaps = 37/572 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +  L+  Y  IG   EA+ L+  +   G  P++FT    L +C+    F  G +    + 
Sbjct: 84  WTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVT 143

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K GFD +  + + LI+FY +CG   +  RVF+ M+  ++VSWT ++ +        +A+ 
Sbjct: 144 KSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQ 203

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           L+  M++ G+ PN  T V +++A + L  L  G  V A++    ++ N ++  ALVDMY 
Sbjct: 204 LYHRMIQTGVAPNEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTALVDMYC 262

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KC +++ A ++     + ++ L   I+S + +    REA+    EM   G  P+  T   
Sbjct: 263 KCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSG 322

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ-EMACRIFDHMSNK 404
            ++A + +  L  G+  H  V+  GLE   S+ N+++DMYMKC    E A R F  +++ 
Sbjct: 323 ILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASP 382

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            V+SW SLIAG  ++G                               + EE++++F  M 
Sbjct: 383 NVISWTSLIAGFSEHG-------------------------------LEEESIKVFGAMQ 411

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              ++ +  T+  +  ACG + +L   + ++ YI KN    D+ +  ALVD +A  G   
Sbjct: 412 GVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVD 471

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A  V   M+ RDV  +T+    +   GN E A+ +   M +  ++ D       L+A +
Sbjct: 472 DAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAA 531

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
              ++  G  L    +   G+   I     +VDL G+ G + +A      +  EP+ V W
Sbjct: 532 GIPIMETGKQL-HCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEI-TEPDAVSW 589

Query: 645 GSLL--AACQKHQNVDIAAYAAERITELDPEK 674
             L+   A   H +  ++A+   R+  ++P++
Sbjct: 590 NGLIFGLASNGHVSSALSAFEDMRLAGVEPDQ 621



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 226/452 (50%), Gaps = 35/452 (7%)

Query: 135 LPDKFTFPFVLNACT--KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           +P K  +  + +  +   S +  +G+ +H  I+KMGF  D+F+ N L++ YG+C  + + 
Sbjct: 10  IPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEA 69

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           R++FDEM  R+V SWT L+ A  +    +EA+ LF  M+  G  PN  T+   + +C+ L
Sbjct: 70  RQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL 129

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
           +    G R  A + + G  +N ++ +AL+D Y KCG    A ++F    + ++V    ++
Sbjct: 130 REFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMV 189

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
           S++V  G   +AL +   M+  G  P+  T +  ++AS+ LG L  G++ H +++   +E
Sbjct: 190 SSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIE 248

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               +   ++DMY KC   E A ++        V  W ++I+                  
Sbjct: 249 LNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIIS------------------ 290

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
                        G TQ   F EA+  F  M +  +  +  T  G+ +AC  + ALDL K
Sbjct: 291 -------------GFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGK 337

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGD-PQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
            I++ +   G+  D+ +  +LVDM+ +C +  + A++ FR +   +V +WT+ I   +  
Sbjct: 338 QIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEH 397

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           G  E+++++F  M   G++P+S     +L AC
Sbjct: 398 GLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 211/469 (44%), Gaps = 36/469 (7%)

Query: 17  VTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVV-- 71
           +T       +   P +    G L  C ++  L   KQ H  ++  GL +  S  + +V  
Sbjct: 302 ITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDM 361

Query: 72  -CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA 130
              C+ M     +  A +AF      N  S T     SLI G+S  GL  E+I ++  + 
Sbjct: 362 YMKCSNM-----IEDAVRAFRGIASPNVISWT-----SLIAGFSEHGLEEESIKVFGAMQ 411

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G+ P+ FT   +L AC    +  +  ++HG I+K   D DV V N L++ Y   G + 
Sbjct: 412 GVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVD 471

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
           D   V   M  R+V+++TSL     +    + A+ +   M ++ ++ +  ++   +SA A
Sbjct: 472 DAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAA 531

Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
            +  +E G ++  Y  + G+ +   + N LVD+Y KCG +  A + F E  + + V  N 
Sbjct: 532 GIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNG 591

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-------RMCH 363
           ++      G    AL+  ++M L G  PD++T L  + A +  G +  G       R  H
Sbjct: 592 LIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKH 651

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDV 422
           G  +R  L+ +  +C  ++D+  + G+ E A  + + M  K   + + +L+     +G++
Sbjct: 652 G--IRPQLDHY--VC--LVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNI 705

Query: 423 ----ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                 AR+     P     ++  +L  L  ++   E  E  R M+ ER
Sbjct: 706 PLGEHMARQGLELDPSDP--AFYVLLANLYDDSGRSELGEKTRRMMRER 752


>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
 gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/537 (38%), Positives = 322/537 (59%), Gaps = 32/537 (5%)

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           NT++  YV +    EAL   +EM+  G  PD  T    + A  +L  +  G+  HG V +
Sbjct: 101 NTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFK 160

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
            GLE    + N++I+MY +CG+ E++                                 V
Sbjct: 161 LGLEADVFVQNSLINMYGRCGEMELS-------------------------------SAV 189

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGA 487
           F ++  +   SW++M+       M+ E + LFR M SE  +K +   MV    AC   GA
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGA 249

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           L+L   I+ ++ +N    ++ + T+LVDM+ +CG   +A+ +F++MEKR+   ++A I  
Sbjct: 250 LNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISG 309

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
           +A+ G GE A+ +F++M+++G++PD +V+V VL ACSH GLV +G  +F  M     V P
Sbjct: 310 LALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEP 369

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
              HYGC+VDLLGRAGLL EAL+ I+S+P+E NDVIW + L+ C+  QN+++   AA+ +
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQEL 429

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
            +L     G ++L+SN+Y+    W +VAR R ++  +G+++ PG S +E+ GK H F S 
Sbjct: 430 LKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQ 489

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           D SHP+   I  ML +M  +L+  GY PDLT +LL+VDE+EKK  L  HS+K+A+AFGL+
Sbjct: 490 DRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLL 549

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            T     I++ +NLR+C DCH++ K +S +Y+REI+VRD NRFH F+ G+CSC D+W
Sbjct: 550 YTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 9/388 (2%)

Query: 31  KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISK-VVCTCAQMGTFESLTYAQKA 89
           K+   +  LK C  ++E KQ H   +K  L +  S+ +  V+  CA  G   S+ YA   
Sbjct: 29  KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88

Query: 90  FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
           F   I D  T    F +N++IRGY  +    EA+  Y E+   G  PD FT+P +L ACT
Sbjct: 89  FRG-IDDPCT----FDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 143

Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
           +  +  EG Q+HG + K+G + DVFV+N LIN YG CG++     VF+++  +   SW+S
Sbjct: 144 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203

Query: 210 LICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL 268
           ++ A A   +  E + LF  M  E  +K     MV  + ACA    L LG  +  ++   
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263

Query: 269 GMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
             + N ++  +LVDMY+KCG +D A  +F + + RN +  + ++S     G    AL + 
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMK 387
            +M+  G  PD V  +S ++A +  G +  GR     +L+ G +E        ++D+  +
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383

Query: 388 CGKQEMACRIFDHMS-NKTVVSWNSLIA 414
            G  E A      +   K  V W + ++
Sbjct: 384 AGLLEEALETIQSIPIEKNDVIWRTFLS 411



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 173/350 (49%), Gaps = 36/350 (10%)

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           +EA+  + EM++ G +P++ T  C++ AC +L+++  G ++   + +LG++A+  + N+L
Sbjct: 114 EEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSL 173

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPD 339
           ++MY +CG ++ +  +F + + +     ++++S    +G+  E L +   M      + +
Sbjct: 174 INMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAE 233

Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
              M+SA+ A A  G L  G   HG++LRN  E    +  +++DMY+KCG  + A  IF 
Sbjct: 234 ESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            M  +  ++++++I+GL  +G+ ESA  +FS+                            
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSK---------------------------- 325

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFA 518
              M+ E ++ D V  V V +AC + G +   + ++A + K G +    +    LVD+  
Sbjct: 326 ---MIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG 382

Query: 519 RCGDPQRAMQVFRR--MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           R G  + A++  +   +EK DV  W   +    +  N E       E+L+
Sbjct: 383 RAGLLEEALETIQSIPIEKNDV-IWRTFLSQCRVRQNIELGQIAAQELLK 431



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 136/273 (49%), Gaps = 14/273 (5%)

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           +NTM+ G      FEEA+  +  M+    + D  T   +  AC  L ++   K I+  + 
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G+  D+ +  +L++M+ RCG+ + +  VF ++E +  ++W++ + A A  G   + + 
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219

Query: 560 LFNEMLRQ-GIKPDSIVFVGVLTACSHGGLVNQGWH----LFRSMTDIHGVSPQIVHYGC 614
           LF  M  +  +K +    V  L AC++ G +N G      L R++++++     I+    
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELN-----IIVQTS 274

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITE--LDP 672
           +VD+  + G L +AL + + M  + N++ + ++++    H   + A     ++ +  L+P
Sbjct: 275 LVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEP 333

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +   V+V + N  + +G      RV  +M ++G
Sbjct: 334 DHV-VYVSVLNACSHSGLVKEGRRVFAEMLKEG 365


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/708 (33%), Positives = 388/708 (54%), Gaps = 33/708 (4%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L+ C ++ + G    +HG +VK G   D+FV   L+N Y  CG   D R +FD+M E+N
Sbjct: 84  LLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKN 143

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VV+WT+LI          EA+ +F EM+E G  P+  T+  +++AC+   N +LG +V  
Sbjct: 144 VVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHG 203

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS------NYVR 317
           Y  +    +   + N+L  MY K G++++A + F    D+N++   T++S      NY  
Sbjct: 204 YTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTE 263

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           LG     L +  +ML+ G  P+  T+ S +S      DL  G+    +  + G +    +
Sbjct: 264 LG-----LTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPV 318

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N+ + +Y++ G+ + A R F+ M + ++++WN++I+G  +   +E+A++          
Sbjct: 319 KNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQ--IMETAKD---------- 366

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                    L   +   +A+++FR +    +K D  T   + S C  + AL+  + I+A 
Sbjct: 367 --------DLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQ 418

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             K G   D+ + +ALV+M+ +CG  + A + F  M  R +  WT+ I   +  G  ++A
Sbjct: 419 TIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEA 478

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           ++LF +M   G++P+ I FV VL+ACS+ GL  +  H F  M + + + P + HYGCMVD
Sbjct: 479 IQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVD 538

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           +  R G L +A   I+    EPN+ IW SL+A C+ H N+++A YAA+R+ EL P+    
Sbjct: 539 MFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIET 598

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +VLL N+Y S  +W +VARVR  MK++G+  L   S I +  KV+ F + D++H   + +
Sbjct: 599 YVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDEL 658

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLS--HHSEKLAMAFGLISTSKTMPI 795
             +L  +  + +  GY P  +  L D ++ +K    S  HHSE+LA+A GL+ T     +
Sbjct: 659 YQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATV 718

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           RV KN+ +C DCHS  K  S + +REI+VRD+ R H F+ G CSC DF
Sbjct: 719 RVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/573 (25%), Positives = 256/573 (44%), Gaps = 66/573 (11%)

Query: 37  GSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKD 96
           GSL   + L      H H++K G        + +V    + G  +    A+  FD   + 
Sbjct: 92  GSLGGARAL------HGHMVKTGTSADMFVATSLVNAYMRCGASQD---ARSLFDQMPEK 142

Query: 97  NETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
           N     +  + +LI GY+     +EA+ ++VE+   G  P  +T   +LNAC+ S+    
Sbjct: 143 N-----VVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADL 197

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G QVHG  +K        + N L   Y + G +    R F  + ++NV++WT++I ACA 
Sbjct: 198 GSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAE 257

Query: 217 RDLPKE-AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
            +   E  + LF +M+ +G+ PN  T+  V+S C    +L LG +V A+  ++G + N  
Sbjct: 258 DENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIP 317

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL-----------GLAREA 324
           + N+ + +Y++ G  D A + F E  D +++  N ++S Y ++               +A
Sbjct: 318 VKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQA 377

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +   +     +PD  T  S +S  + +  L  G   H   ++ G      + + +++M
Sbjct: 378 LKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNM 437

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KCG  E A + F  MS +T+V+W S+I+G  ++G                        
Sbjct: 438 YNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRP---------------------- 475

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGI 503
                    +EA++LF  M    ++ + +T V V SAC Y G  + A+  +  + E+  I
Sbjct: 476 ---------QEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKI 526

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFN 562
              +     +VDMF R G    A    RR   + + + W++ +      GN E A    +
Sbjct: 527 EPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 586

Query: 563 EMLRQGIKPDSI-VFVGVLTACSHGGLVNQGWH 594
            ++   ++P  I  +V +L       + N+ WH
Sbjct: 587 RLIE--LRPKGIETYVLLLNMY----ISNERWH 613



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 191/439 (43%), Gaps = 49/439 (11%)

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+ EG    S   V ++  C +  +L     +  ++ + G  A+  +  +LV+ YM+CGA
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGA 128

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT---MLSA 346
              A+ LF +  ++N+V    +++ Y       EAL +  EML  G  P   T   ML+A
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNA 188

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
            SAS    DL  G   HGY ++       SI N++  MY K G  E A R F  + +K V
Sbjct: 189 CSASNN-ADL--GSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNV 245

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           ++W ++I+   ++                              EN  E  + LF  ML +
Sbjct: 246 ITWTTMISACAED------------------------------ENYTELGLTLFLDMLMD 275

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            +  +  T+  V S CG    L+L K + A+  K G   ++ +  + + ++ R G+   A
Sbjct: 276 GVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEA 335

Query: 527 MQVFRRMEKRDVSAWTAAIGAMA--ME---------GNGEQAVELFNEMLRQGIKPDSIV 575
           M+ F  M+   +  W A I   A  ME           G QA+++F  + R  +KPD   
Sbjct: 336 MRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFT 395

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F  +L+ CS    + QG  +  + T   G    +V    +V++  + G + +A      M
Sbjct: 396 FSSILSVCSSMMALEQGEQI-HAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEM 454

Query: 636 PVEPNDVIWGSLLAACQKH 654
            +    V W S+++   +H
Sbjct: 455 SIR-TLVTWTSMISGYSQH 472


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/565 (38%), Positives = 324/565 (57%), Gaps = 38/565 (6%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY KCGAV  A+ +F +   R++V    +++ Y +  +  EA+ +L +ML    RP+  T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMYMKCGKQEMACRIFD 399
             S + A+   G    G   H   ++     WD    + + ++DMY +C + +MA  +FD
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYN---WDEDVYVGSALLDMYARCEQMDMAIMVFD 117

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
            + +K                               + +SWN ++ G  ++   E  +  
Sbjct: 118 RLVSK-------------------------------NEVSWNALIAGFARKADGETTLMK 146

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
           F  M          T   + SA   +GAL+  +W++A++ K+G      +   ++ M+A+
Sbjct: 147 FAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAK 206

Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
            G    A +VF RM+KRD+  W   + A+A  G G++AV  F E+ + GI+ + I F+ V
Sbjct: 207 SGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSV 266

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           LTACSHGGLV +G H F  M D + V P+I HY   VDLLGRAGLL EAL  +  MP+EP
Sbjct: 267 LTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEP 325

Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
              +WG+LL AC+ H+N  +  YAA+ + ELDP+ +G  VLL NIYAS GKW + ARVR 
Sbjct: 326 TAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRK 385

Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            MK  G++K P  S +++   VH F + D++HP+  +I  M  E+N R++ AGYVP+  +
Sbjct: 386 MMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAH 445

Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
           VLL ++EQE++  L +HSEK+A+AF LI+      IR++KN+R+C DCHS  K VSKV+ 
Sbjct: 446 VLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFK 505

Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
           REI+VRD NRFH F +GSCSC D+W
Sbjct: 506 REIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 180/398 (45%), Gaps = 35/398 (8%)

Query: 183 YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
           Y +CG + D R VFD+M  R+VVSWT LI   A+  +P EA+ L  +M+    +PN  T 
Sbjct: 2   YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
             ++ A        +G+++ A   +     +  + +AL+DMY +C  +D A  +F     
Sbjct: 62  TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           +N V  N +++ + R       L    EM  +G      T  S  SA A++G L  GR  
Sbjct: 122 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWV 181

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H +++++G +    + NTM+ MY K G    A ++FD M  + +V+WN            
Sbjct: 182 HAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWN------------ 229

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                              TML  L Q  + +EA+  F  +    I+++++T + V +AC
Sbjct: 230 -------------------TMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTAC 270

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-W 541
            + G +   K  +  ++   +  ++    + VD+  R G  + A+    +M     +A W
Sbjct: 271 SHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVW 330

Query: 542 TAAIGAMAMEGN---GEQAVELFNEMLRQGIKPDSIVF 576
            A +GA  M  N   G+ A +   E+      P  +++
Sbjct: 331 GALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLY 368



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 132/262 (50%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           ++ D   S  +  +  LI GY+   +  EAI L  ++      P+ FTF  +L A     
Sbjct: 13  HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 72

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G Q+H   VK  +D DV+V + L++ Y  C  +     VFD +  +N VSW +LI 
Sbjct: 73  GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 132

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             AR+   +  +  F EM   G      T   + SA A++  LE G  V A++ + G K 
Sbjct: 133 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 192

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
            A + N ++ MY K G++  A+++F     R+LV  NT+++   + GL +EA+A  +E+ 
Sbjct: 193 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIR 252

Query: 333 LHGPRPDRVTMLSAVSASAQLG 354
             G + +++T LS ++A +  G
Sbjct: 253 KCGIQLNQITFLSVLTACSHGG 274


>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 558

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/557 (38%), Positives = 326/557 (58%), Gaps = 36/557 (6%)

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           ++  A+ +F      + +  NTI+ ++ R      +L+    M  +G   D  T    + 
Sbjct: 37  SLSYARYVFSRIPSPDTIAYNTIIRSHSRF-FPSHSLSYFFSMRSNGIPLDNFTFPFVLK 95

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A ++L   L     H  +++ GL     + N +I +Y  CG  EMA +            
Sbjct: 96  ACSRLQINL---HLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVK------------ 140

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM-LSER 467
                              VF EM  RD +SW+T++          EA++LF  M L ++
Sbjct: 141 -------------------VFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDK 181

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           +  D VTM+ V SA  +LG L+L +W+ A+I + G    + L TAL+DMF+RCG    ++
Sbjct: 182 VVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESI 241

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            VF +M  R+V  WTA I  + + G   +A+ +F+ M + G++PD + F GVL ACSHGG
Sbjct: 242 VVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGG 301

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV +GW +F S+  ++G+ P + HYGCMVD+LGRAGLL EA D ++ MP++PN +IW +L
Sbjct: 302 LVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTL 361

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC  H N+ +A     +I+++   ++G  VLLSN+Y +AG+W   A +R +M+E+ I 
Sbjct: 362 LGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIG 421

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K PG SSI V+  +HEF SGD SHP+  +I+  L  +   LR+ GY+    NVL D++E+
Sbjct: 422 KEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEE 481

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           E+++ LS+HSEKLA+AF ++S      IR++KNLR+C DCHSF K +S  ++R+II+RD 
Sbjct: 482 EREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDR 541

Query: 828 NRFHFFRQGSCSCSDFW 844
           NRFH F +G CSC D+W
Sbjct: 542 NRFHHFEKGLCSCHDYW 558



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 206/409 (50%), Gaps = 42/409 (10%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           +N + + HC+I+K    + P  +  ++ +C      ESL+YA+     Y+     S    
Sbjct: 1   MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAP-ESLSYAR-----YVFSRIPSPDTI 54

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            YN++IR +S       ++S +  +   GI  D FTFPFVL AC++       + +H  I
Sbjct: 55  AYNTIIRSHSRF-FPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSRLQI---NLHLHSLI 110

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           VK G   D+FV+N LI  YG CG +    +VFDEMSER+ VSW+++I +        EA+
Sbjct: 111 VKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEAL 170

Query: 225 YLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            LF +M +E+ + P+ VTM+ VISA + L +LELG  V A+I  LG   +  +  AL+DM
Sbjct: 171 DLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDM 230

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           + +CG++D +  +F +   RN++    +++     G + EALA+   M   G +PD VT 
Sbjct: 231 FSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTF 290

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
              + A +           HG +++   EGWD I  ++  +Y   G   +     DH   
Sbjct: 291 SGVLVACS-----------HGGLVK---EGWD-IFESIRKVY---GMDPL----LDH--- 325

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQEN 451
                +  ++  L + G +  A +    MP + + I W T+LG     N
Sbjct: 326 -----YGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHN 369



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 40/366 (10%)

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R VF  +   + +++ ++I + +R   P  ++  FF M   GI  ++ T   V+ AC++
Sbjct: 41  ARYVFSRIPSPDTIAYNTIIRSHSRF-FPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSR 99

Query: 252 LQ-NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
           LQ NL L   +  Y    G+ ++  + NAL+ +Y  CG+++ A ++F E  +R+ V  +T
Sbjct: 100 LQINLHLHSLIVKY----GLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWST 155

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++++++  G A EAL + ++M L     PD VTMLS +SA + LGDL  GR    ++ R 
Sbjct: 156 VIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRL 215

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           G     ++   +IDM+ +CG  + +  +F+ M+ + V++W +LI GL             
Sbjct: 216 GFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGL------------- 262

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
                           G+   +M  EA+ +F  M    ++ D VT  GV  AC + G + 
Sbjct: 263 ----------------GIHGRSM--EALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVK 304

Query: 490 LAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-AWTAAIGA 547
               I+  I K  G+   +     +VD+  R G    A     RM  +  S  W   +GA
Sbjct: 305 EGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGA 364

Query: 548 MAMEGN 553
                N
Sbjct: 365 CVNHNN 370



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 14/299 (4%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           LK C  L      H  I+K GLG      + ++C     G   SL  A K FD   + + 
Sbjct: 94  LKACSRLQINLHLHSLIVKYGLGSDIFVQNALICVYGYCG---SLEMAVKVFDEMSERDS 150

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEG 157
            S +  + + L  GY+      EA+ L+ ++     ++PD+ T   V++A +       G
Sbjct: 151 VSWSTVIASFLNNGYAS-----EALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELG 205

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             V   I ++GF   V +   LI+ +  CG I +   VF++M+ RNV++WT+LI      
Sbjct: 206 RWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIH 265

Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALM 276
               EA+ +F  M + G++P+ VT   V+ AC+    ++ G  +   I ++ GM      
Sbjct: 266 GRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDH 325

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDR-NLVLCNTIMS---NYVRLGLAREALAILDEM 331
              +VD+  + G ++ A         + N ++  T++    N+  LGLA +  A + ++
Sbjct: 326 YGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKI 384


>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 558

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 213/557 (38%), Positives = 327/557 (58%), Gaps = 36/557 (6%)

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           ++  A+ +F      + +  NTI+ ++ R      +L     M  +G   D  T    + 
Sbjct: 37  SLSYARYVFSRIPSPDTIAYNTIIRSHSRF-FPSHSLFYFFSMRSNGIPLDNFTFPFVLK 95

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A ++L   L     H  +++ GL+    + N +I +Y  CG  EMA ++FD         
Sbjct: 96  ACSRLQINL---HLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFD--------- 143

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM-LSER 467
                                 EM  RD +SW+T++          EA++LF  M L ++
Sbjct: 144 ----------------------EMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDK 181

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           +  D VTM+ V SA  +LG L+L +W+ A+I + G+   + L TAL+DMF+RCG    ++
Sbjct: 182 VVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESI 241

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
            VF +M  R+V  WTA I  + + G   +A+ +F+ M + G++PD + F GVL ACSHGG
Sbjct: 242 VVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGG 301

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV +GW +F S+  ++ + P + HYGCMVD+LGRAGLL EA D ++ MP++PN +IW +L
Sbjct: 302 LVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTL 361

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC  H N+ +A     +I+++   ++G  VLLSN+Y +AG+W   A +R +M+E+ I 
Sbjct: 362 LGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIG 421

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K PG SSI V+  +HEF SGD SHP+  +I+  L  +   LR+ GY+    NVL D++E+
Sbjct: 422 KEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEE 481

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           E+++ LS+HSEKLA+AF ++S      IR++KNLR+C DCHSF K +S  ++R+II+RD 
Sbjct: 482 EREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDR 541

Query: 828 NRFHFFRQGSCSCSDFW 844
           NRFH F +G CSC D+W
Sbjct: 542 NRFHHFEKGLCSCHDYW 558



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 204/409 (49%), Gaps = 42/409 (10%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           +N + + HC+I+K    + P  +  ++ +C      ESL+YA+     Y+     S    
Sbjct: 1   MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAP-ESLSYAR-----YVFSRIPSPDTI 54

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
            YN++IR +S       ++  +  +   GI  D FTFPFVL AC++       + +H  I
Sbjct: 55  AYNTIIRSHSRF-FPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSRLQI---NLHLHSLI 110

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           VK G D D+FV+N LI  YG CG +    +VFDEMSER+ VSW+++I +        EA+
Sbjct: 111 VKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEAL 170

Query: 225 YLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
            LF +M +E+ + P+ VTM+ VISA + L +LELG  V A+I  LG+  +  +  AL+DM
Sbjct: 171 DLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDM 230

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           + +CG++D +  +F +   RN++    +++     G + EALA+   M   G +PD VT 
Sbjct: 231 FSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTF 290

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
              + A +           HG +++   EGW        D++    K      + DH   
Sbjct: 291 SGVLVACS-----------HGGLVK---EGW--------DIFESIRKVYRMDPLLDH--- 325

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQEN 451
                +  ++  L + G +  A +    MP + + I W T+LG     N
Sbjct: 326 -----YGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHN 369



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 116/308 (37%), Gaps = 77/308 (25%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           LK C  L      H  I+K GL       + ++C     G   SL  A K FD   + + 
Sbjct: 94  LKACSRLQINLHLHSLIVKYGLDSDIFVQNALICVYGYCG---SLEMAVKVFDEMSERDS 150

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEG 157
            S +  + + L  GY+      EA+ L+ ++     ++PD+ T   V++A +       G
Sbjct: 151 VSWSTVIASFLNNGYAS-----EALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELG 205

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL------- 210
             V   I ++G    V +   LI+ +  CG I +   VF++M+ RNV++WT+L       
Sbjct: 206 RWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVH 265

Query: 211 ----------------------------ICACARRDLPKEAVYLF--------------- 227
                                       + AC+   L KE   +F               
Sbjct: 266 GRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDH 325

Query: 228 -----------------FEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
                            ++ VE   +KPNS+    ++ AC    NL L ++V A I ++ 
Sbjct: 326 YGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKIS 385

Query: 270 MKANALMV 277
              N  +V
Sbjct: 386 SSQNGDLV 393


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/622 (35%), Positives = 362/622 (58%), Gaps = 42/622 (6%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM--GFDRDVFVENCLINFYGECGDIVDGR 193
           P K +F   L  C          Q+H +I+K     D  + +   L     +   I D R
Sbjct: 20  PHKLSFLSTLQTCKSIKGLK---QIHASIIKTMPSPDAQLTISTRLSALCAQSLPI-DPR 75

Query: 194 ---RVFDEMSERNVVSWTSLICACARRDLPK-EAVYLFFEMVEEGIKPNSVTMVCVISAC 249
               +  ++   N+  + ++I   A  +    E + ++ +M+ +GI P++ T+  V+ AC
Sbjct: 76  YALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKAC 135

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           A+ + +  G+ V     ++G+ ++  + N L+ MY  C  + +A+++F     R+LV   
Sbjct: 136 AESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWT 195

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           T++  YV++G ARE + +  EM     + D +T++  +S+ A+LGDL  GR  H Y++RN
Sbjct: 196 TMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRN 255

Query: 370 GLEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
                D  + N ++DMY+KCG                               D   AR+V
Sbjct: 256 SNVNLDVFVGNALVDMYLKCG-------------------------------DANFARKV 284

Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
           F EMP ++ +SWN+M+ GL Q+  F+E++ +FR M    +K D VT+V V ++C  LG L
Sbjct: 285 FQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVL 344

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
           +L KW++AY+++N I  D  +  ALVDM+A+CG   +A  VF+ M ++DV ++TA I  +
Sbjct: 345 ELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGL 404

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
           AM G G +A++LF+EM + GI+PD + FVGVLTACSH GLV +G   F  M+ I+ + PQ
Sbjct: 405 AMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQ 464

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
           + HYGCMVDLLGRAGL+ EA + I++MP+EP+  + G+LL AC+ H  V++     ++I 
Sbjct: 465 LEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIE 524

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           +++P K G +VL+SNIY+SA +W +  ++R  MKE+ + K PG SSIE++G +HEF  GD
Sbjct: 525 KIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGD 584

Query: 729 ESHPEMNNISSMLREMNCRLRD 750
           +SHP++  I  +L E+   L++
Sbjct: 585 KSHPKIKEIYKLLDEIMSHLKN 606



 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 181/613 (29%), Positives = 292/613 (47%), Gaps = 80/613 (13%)

Query: 29  TPKDSPSIGSLKNCKTLNELKQPHCHILKQ--GLGHKPSYISKVVCTCAQMGTFESLTYA 86
            P     + +L+ CK++  LKQ H  I+K       + +  +++   CAQ    +   YA
Sbjct: 19  NPHKLSFLSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDP-RYA 77

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGL-GVEAISLYVELAGFGILPDKFTFPFVL 145
                     N     L +YN++IRG +      +E + +Y ++   GI+PD +T PFVL
Sbjct: 78  LSLLAQLRTPN-----LPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 132

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            AC +S A  EG +VHG  +KMG   DV+V N L+  Y  C  I   R+VFD   +R++V
Sbjct: 133 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLV 192

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAY- 264
           SWT++I    +    +E V LFFEM  E ++ + +T+V V+S+CA+L +L LG ++  Y 
Sbjct: 193 SWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYI 252

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
           I    +  +  + NALVDMY+KCG  + A+++F E   +N+V  N+++S   + G  +E+
Sbjct: 253 IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKES 312

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L +  +M   G +PD VT+++ +++ A LG L  G+  H Y+ RN +     I N ++DM
Sbjct: 313 LYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDM 372

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KCG  + AC +F  M+ K V S+ ++I GL  +G    A ++FSEMP           
Sbjct: 373 YAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMG-------- 424

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGI 503
                                  I+ D VT VGV +AC ++G ++  +  +  +     +
Sbjct: 425 -----------------------IEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNL 461

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
              ++    +VD+  R G    A +  R M                              
Sbjct: 462 RPQLEHYGCMVDLLGRAGLINEAEEFIRNMP----------------------------- 492

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI-VHYGCMVDLLGRA 622
                I+PD+ V   +L AC   G V  G  +   M  I  + P+    Y  M ++   A
Sbjct: 493 -----IEPDAFVLGALLGACKIHGKVELGESV---MKKIEKIEPRKDGAYVLMSNIYSSA 544

Query: 623 GLLGEALDLIKSM 635
               +AL L K+M
Sbjct: 545 NRWRDALKLRKTM 557


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/614 (37%), Positives = 340/614 (55%), Gaps = 37/614 (6%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+  T   +I  C    +L  G RV  +I + G   +  +   L+ MY   G+VD A+++
Sbjct: 75  PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT---MLSAVSASAQL 353
           F + + R + + N +       G   E L +  +M   G   DR T   +L A  AS   
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 354 GDLLC-GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
            D L  G+  H ++ R G      I  T++DMY + G     C                 
Sbjct: 195 ADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFG-----C----------------- 232

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER--IKV 470
                    V+ A  VF+ MP R+ +SW+ M+    +     EA+  FR M++E      
Sbjct: 233 ---------VDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSP 283

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           + VTMV V  AC  L AL+  + I+ YI + G+   + + +ALV M+ RCG      +VF
Sbjct: 284 NSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVF 343

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
            RM  RDV +W + I +  + G G +A+++F EML  G  P  + FV VL ACSH GLV 
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G  LF SM   HG+ PQ+ HY CMVDLLGRA  L EA  +++ M  EP   +WGSLL +
Sbjct: 404 EGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H NV++A  A+ R+  L+P+ +G +VLL++IYA A  W  V RV+  ++ +G++KLP
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G   +EV  K++ F S DE +P M  I + L ++   +++ GY+P    VL +++ +EK+
Sbjct: 524 GRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKE 583

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
            ++  HSEKLA+AFGLI+TSK  PIR+ KNLRLC DCH F K +SK  ++EI+VRD NRF
Sbjct: 584 RIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRF 643

Query: 831 HFFRQGSCSCSDFW 844
           H F+ G CSC D+W
Sbjct: 644 HRFKNGVCSCGDYW 657



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 204/394 (51%), Gaps = 20/394 (5%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H HIL  G    P   +K++   + +G   S+ YA+K FD          T++++N+L R
Sbjct: 100 HRHILDNGSDQDPFLATKLIGMYSDLG---SVDYARKVFD-----KTRKRTIYVWNALFR 151

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA----FGEGVQVHGAIVKM 167
             +  G G E + LY ++   G+  D+FT+ +VL AC  S        +G ++H  + + 
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRR 211

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
           G++  V++   L++ Y   G +     VF+ M  RNVVSW+++I   A+     EA+  F
Sbjct: 212 GYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271

Query: 228 FEMVEE--GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            EM+ E     PNSVTMV V+ ACA L  LE G  +  YI   G+ +   +++ALV MY 
Sbjct: 272 REMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYG 331

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           +CG +D  +++F    DR++V  N+++S+Y   G  R+A+ I +EML +G  P  VT +S
Sbjct: 332 RCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVS 391

Query: 346 AVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
            + A +  G +  G+     + R+ G++        M+D+  +  + + A ++   M  +
Sbjct: 392 VLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTE 451

Query: 405 TVVS-WNSLIAGLIKNGDVE----SAREVFSEMP 433
                W SL+     +G+VE    ++R +F+  P
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 177/338 (52%), Gaps = 10/338 (2%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P + T+  ++  C   S+  +G++VH  I+  G D+D F+   LI  Y + G +   R+V
Sbjct: 75  PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQ-- 253
           FD+  +R +  W +L  A       +E + L+++M   G++ +  T   V+ AC   +  
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 254 --NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
             +L  G  + A++   G  ++  ++  LVDMY + G VD A  +F     RN+V  + +
Sbjct: 195 ADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAM 254

Query: 312 MSNYVRLGLAREALAILDEMLLH--GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++ Y + G A EAL    EM+       P+ VTM+S + A A L  L  GR+ HGY+LR 
Sbjct: 255 IACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR 314

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL+    + + ++ MY +CGK ++  R+FD M ++ VVSWNSLI+    +G    A ++F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIF 374

Query: 430 SEM----PGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
            EM         +++ ++LG  + E + EE   LF  M
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESM 412



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L + K+ H H+ ++G       ++ +V   A+ G  +   YA   F+     N  S    
Sbjct: 198 LTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVD---YASYVFNGMPVRNVVS---- 250

Query: 105 MYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            ++++I  Y+  G   EA+  + E+        P+  T   VL AC   +A  +G  +HG
Sbjct: 251 -WSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHG 309

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            I++ G D  + V + L+  YG CG +  G+RVFD M +R+VVSW SLI +       ++
Sbjct: 310 YILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRK 369

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALV 281
           A+ +F EM+  G  P  VT V V+ AC+    +E G R+   +  + G+K        +V
Sbjct: 370 AIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMV 429

Query: 282 DMYMKCGAVDTAKQL 296
           D+  +   +D A ++
Sbjct: 430 DLLGRANRLDEAAKM 444


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/600 (37%), Positives = 342/600 (57%), Gaps = 31/600 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++  CAK + L  G    A I  +G+K + L  N L++MY KCG+VD A+Q+F E   R+
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           LV  NT++ +  + G   EAL +L +M   G      T+ S + A A    L   ++ H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           + ++  ++    +   ++D+Y KCG                          L+K+     
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCG--------------------------LMKD----- 218

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A  VF  MP R  ++W++M  G  Q  M+E+A+ LFR      +K D+  M  V  AC  
Sbjct: 219 AVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAG 278

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           L A+   K + A + K+G   ++ +A++L+DM+A+CG  + + +VFR +EKR+V  W A 
Sbjct: 279 LAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAM 338

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I  ++      + + LF +M + G+ P+ + FV VL+AC H GLV +G   F  MT  H 
Sbjct: 339 ISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHH 398

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           ++P + HY CMVD L RAG + EA DLI  +P   +  +WGSLLA+C+ H N+++A  AA
Sbjct: 399 LAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAA 458

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           +++ +++P  SG ++LLSN+YA+ GKW  VA++R  +KE  ++K  G S IE+  KVH F
Sbjct: 459 KKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLF 518

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
             G+ +HP++  I S L E+   L+  GY  +  + L  V E  K+ LL HHSEKLA   
Sbjct: 519 MVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTM 578

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GL+      PIR++KNLR+C DCHSF KL SK + R++IVRD NRFH F+ G CSC DFW
Sbjct: 579 GLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 195/416 (46%), Gaps = 33/416 (7%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C K     +G   H  I+ MG   D+   N LIN Y +CG +   R+VFDEM  R+
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +VSW ++I +  +     EA+ L  +M  EG   +  T+  V+ ACA    L     + A
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           +  +  M  N  +  AL+D+Y KCG +  A  +F    DR++V  +++ + YV+  +  +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           ALA+  +    G + D+  M S + A A L  ++ G+  +  + ++G      + +++ID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG  E + ++F  +  + VV WN++I+GL ++     AR +               
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRH-----ARSL--------------- 349

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NG 502
                      E M LF  M    +  + VT V V SACG++G +   +  +  + K + 
Sbjct: 350 -----------EVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHH 398

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           +  ++   + +VD  +R G    A  +  ++      S W + + +    GN E A
Sbjct: 399 LAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 187/369 (50%), Gaps = 14/369 (3%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           S+ +A++ FD        S +L  +N++I   +  G   EA+ L +++   G    +FT 
Sbjct: 114 SVDFARQVFD-----EMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTI 168

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             VL AC    A  E   +H   +K   D +VFV   L++ Y +CG + D   VF+ M +
Sbjct: 169 SSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPD 228

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R+VV+W+S+     + ++ ++A+ LF +  E G+K +   M  VI ACA L  +  G +V
Sbjct: 229 RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQV 288

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A + + G  +N  + ++L+DMY KCG ++ + ++F + + RN+VL N ++S   R   +
Sbjct: 289 NALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARS 348

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI-CNT 380
            E + + ++M   G  P+ VT +S +SA   +G +  G+     + +      +    + 
Sbjct: 349 LEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSC 408

Query: 381 MIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGR 435
           M+D   + G+   A  +   +  N +   W SL+A    +G++E    +A+++F   P  
Sbjct: 409 MVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEP-- 466

Query: 436 DHISWNTML 444
            H S N +L
Sbjct: 467 -HNSGNYLL 474



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 34/295 (11%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL----TYAQKA-- 89
           IGSL      NE       + ++G       IS V+C CA             +A KA  
Sbjct: 137 IGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAM 196

Query: 90  ----------FDYYIK-----------DNETSATLFMYNSLIRGYSCIGLGVEAISLYVE 128
                      D Y K           ++    ++  ++S+  GY    +  +A++L+ +
Sbjct: 197 DLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRK 256

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
               G+  D+F    V+ AC   +A  EG QV+  + K GF  ++FV + LI+ Y +CG 
Sbjct: 257 AWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGG 316

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           I +  +VF ++ +RNVV W ++I   +R     E + LF +M + G+ PN VT V V+SA
Sbjct: 317 IEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSA 376

Query: 249 CAKLQNLELGDRVCAYID----ELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           C  +  ++ G +   Y D    E  +  N    + +VD   + G +  A  L  +
Sbjct: 377 CGHMGLVKKGQK---YFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISK 428


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/718 (32%), Positives = 396/718 (55%), Gaps = 45/718 (6%)

Query: 139 FTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           F  P +L  C  + ++ E   VHG ++K G   + FV + L+N Y +CG++ D RRVFD 
Sbjct: 69  FYVP-LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDN 127

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M  RNVV+WT+L+    +   PK A+++F EM+  G  P+  T+  V+ AC+ LQ+L+LG
Sbjct: 128 MLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG 187

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
           D+  AYI +  +  +A + +AL  +Y KCG ++ A + F   +++N++   + +S     
Sbjct: 188 DQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADN 247

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           G   + L +  EM+    +P+  T+ SA+S   ++  L  G   +   ++ G E    + 
Sbjct: 248 GAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVR 307

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N+++ +Y+K                               +G +  A  +F+ M     +
Sbjct: 308 NSLLYLYLK-------------------------------SGCIVEAHRLFNRMDDASMV 336

Query: 439 SWNTMLGG------LTQENMF-----EEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +WN M+ G      LT++N+       EA++LF  +    +K D  T+  V S C  + A
Sbjct: 337 TWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLA 396

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
           ++  + I+A   K G   D+ ++T+L+ M+++CG  +RA + F  M  R + AWT+ I  
Sbjct: 397 IEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITG 456

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            +  G  +QA+ +F +M   G++P+++ FVGVL+ACSH G+V+Q  + F  M   + + P
Sbjct: 457 FSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKP 516

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
            + HY CMVD+  R G L +AL+ IK M  EP++ IW + +A C+ H N+++  YAAE++
Sbjct: 517 AMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQL 576

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
             L P+    +VLL N+Y SA ++ +V+RVR  M+E+ + KL   S I +  KV+ F + 
Sbjct: 577 LSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTN 636

Query: 728 DESHPEMNNISSMLREMNCRLRDAGY--VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
            ++HP+ + I   L ++  ++++ GY  +  +     + +E++      +HSEKLA+ FG
Sbjct: 637 GKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHSEKLAITFG 696

Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           L +   + PIRVVK+  +C D H+F K VS +  REIIV+D+ R H F  G CSC +F
Sbjct: 697 LENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGECSCGNF 754



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 254/551 (46%), Gaps = 54/551 (9%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           P +    + ++ +E +  H H++K G       +S +V   A+ G  E    A++ FD  
Sbjct: 72  PLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMED---ARRVFDNM 128

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           ++ N  + T     +L+ G+        AI ++ E+   G  P  +T   VL+AC+   +
Sbjct: 129 LRRNVVAWT-----TLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQS 183

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G Q H  I+K   D D  V + L + Y +CG + D  + F  + E+NV+SWTS + A
Sbjct: 184 LKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSA 243

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           CA    P + + LF EM+   IKPN  T+   +S C ++ +LELG +V +   + G ++N
Sbjct: 244 CADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESN 303

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL-----------GLAR 322
             + N+L+ +Y+K G +  A +LF    D ++V  N +++ + ++               
Sbjct: 304 LRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS 363

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           EAL +  ++ L G +PD  T+ S +S  +++  +  G   H   ++ G      +  ++I
Sbjct: 364 EALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLI 423

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
            MY KCG  E A + F  MS +T+++W S+I G  ++G  + A  +F +M          
Sbjct: 424 SMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMS--------- 474

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN- 501
            L G                     ++ + VT VGV SAC + G +  A   +  ++K  
Sbjct: 475 -LAG---------------------VRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKY 512

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMAMEGNGEQAVEL 560
            I   M     +VDMF R G  ++A+   ++M        W+  I      GN E     
Sbjct: 513 KIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYA 572

Query: 561 FNEMLRQGIKP 571
             ++L   +KP
Sbjct: 573 AEQLL--SLKP 581


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/726 (33%), Positives = 394/726 (54%), Gaps = 54/726 (7%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKM--GFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
           + F+ +AC +     +G+ +H  I+        D+F+ N L+N Y +CG +   R +FD+
Sbjct: 81  YAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQ 140

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           M  RN VSWT L+   A+  L +E   LF  M+    +PN      V+ AC + Q+++ G
Sbjct: 141 MPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLA-CFRPNEFAFASVLCACEE-QDVKYG 198

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGA---------VDTAKQLFGECKDRNLVLCN 309
            +V A   ++ +  +  + NAL+ MY KC            D A  +F   + RNL+  N
Sbjct: 199 LQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWN 258

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           +++S +   GL  +A+ +   M  +G R +  T+L  +S+                 L +
Sbjct: 259 SMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSS-----------------LNH 301

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAGLIKN-----GDVE 423
            +   D I NT    ++K       C     ++ K+ ++S   ++  L+K+     G + 
Sbjct: 302 CMSTSDDINNTH---HLK------NCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHIS 352

Query: 424 SAREVFSEMPG-RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
              ++F +  G  D +SW  ++    + +  E+A  LF  +  E   +DR T      AC
Sbjct: 353 DCFKLFLDTSGEHDIVSWTAIISVFAERDP-EQAFLLFCQLHRENFVLDRHTFSIALKAC 411

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
            Y      A  +++ + K G H D  ++ AL+  + R G    + QVF  M   D+ +W 
Sbjct: 412 AYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWN 471

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + + + A+ G  + A++LF +M    + PDS  FV +L ACSH GLV +G  +F SMT+ 
Sbjct: 472 SMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTES 528

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           HG++P + HY CMVDL GRAG + EA +LI+ MP++P+ VIW SLL +C+KH   D+A  
Sbjct: 529 HGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKL 588

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
           AA++   LDP+ S  ++ +SNIY+S G +     +R +M++  +RK PG S +EV  +VH
Sbjct: 589 AADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVH 648

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAM 782
           EFTSG + HP+   I S L  +  +L++ GY P++ + L D++ +  +  L HHSEK+A+
Sbjct: 649 EFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMAL 708

Query: 783 AFGL----ISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
            F +    IS      I+++KN+R+C DCH+F KL SK++ +EI+VRD+NRFH F+  +C
Sbjct: 709 VFAIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKYATC 768

Query: 839 SCSDFW 844
           SC+D+W
Sbjct: 769 SCNDYW 774



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 182/385 (47%), Gaps = 21/385 (5%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL---NACTKSS------ 152
            L  +NS+I G+   GLG +AI L+  +   GI  +  T   VL   N C  +S      
Sbjct: 253 NLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNT 312

Query: 153 -AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG-DIVDGRRVF-DEMSERNVVSWTS 209
                  Q+H   VK G   +V V   L+  Y + G  I D  ++F D   E ++VSWT+
Sbjct: 313 HHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTA 372

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           +I   A RD P++A  LF ++  E    +  T    + ACA     +    V + + + G
Sbjct: 373 IISVFAERD-PEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQG 431

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
              + ++ NAL+  Y + G++  ++Q+F E    +LV  N+++ +Y   G A++AL +  
Sbjct: 432 FHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFK 491

Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
           +M +H   PD  T ++ ++A +  G +  G ++ +     +G+       + M+D+Y + 
Sbjct: 492 QMDVH---PDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRA 548

Query: 389 GKQEMACRIFDHMSNKT-VVSWNSLIAGLIKNGDVESAR---EVFSEMPGRDHISWNTML 444
           GK   A  +   M  K   V W+SL+    K+G+ + A+   + F  +  ++ +++  M 
Sbjct: 549 GKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMS 608

Query: 445 GGLTQENMFEEAMELFRVMLSERIK 469
              +    F EA  + + M   +++
Sbjct: 609 NIYSSGGSFIEAGLIRKEMRDSKVR 633



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 17/285 (5%)

Query: 13  ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVC 72
           +T  +  L++ +   +T  D  +   LKNC  L      HC  +K GL  +   ++ +V 
Sbjct: 289 STTLLGVLSSLNHCMSTSDDINNTHHLKNCFQL------HCLTVKSGLISEVEVVTALVK 342

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
           + A +G      +    F  ++ D      +  + ++I  ++      +A  L+ +L   
Sbjct: 343 SYADLGG-----HISDCFKLFL-DTSGEHDIVSWTAIISVFAERD-PEQAFLLFCQLHRE 395

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
             + D+ TF   L AC          +VH  ++K GF  D  V N LI+ YG  G +   
Sbjct: 396 NFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALS 455

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
            +VF EM   ++VSW S++ + A     K+A+ LF +M    + P+S T V +++AC+  
Sbjct: 456 EQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHA 512

Query: 253 QNLELGDRVCAYIDE-LGMKANALMVNALVDMYMKCGAVDTAKQL 296
             +E G ++   + E  G+  +    + +VD+Y + G +  A++L
Sbjct: 513 GLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEEL 557


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/611 (36%), Positives = 349/611 (57%), Gaps = 41/611 (6%)

Query: 234  GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
            G  P + T+ C   +C K        +  A I   G++ ++ ++     MY+    +D A
Sbjct: 722  GSAPGTDTISCF--SCLK--------KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAA 771

Query: 294  KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
              +F +  +    L N ++  +   G    +L +  +M+  G +PD+     A+ + A L
Sbjct: 772  SIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGL 831

Query: 354  GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
             DL  G++ H +++  G      +   ++DMY KCG                        
Sbjct: 832  SDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCG------------------------ 867

Query: 414  AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
                   D+E+AR VF +M  RD +SW +M+ G        E +  F +M S  +  +RV
Sbjct: 868  -------DIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRV 920

Query: 474  TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
            +++ V  ACG LGAL   +W ++Y+ + G   D+ +ATA++DM+++CG    A  +F   
Sbjct: 921  SILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDET 980

Query: 534  EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
              +D+  W+A I +  + G+G +A++LF++M++ G++P  + F  VL+ACSH GL+ +G 
Sbjct: 981  AGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK 1040

Query: 594  HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
              F+ MT+   ++ ++ +Y CMVDLLGRAG L EA+DLI++MPVEP+  IWGSLL AC+ 
Sbjct: 1041 MYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRI 1100

Query: 654  HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
            H N+D+A   A+ +  LDP  +G HVLLSNIYA+  +W  V +VR  M  +G  K+ G S
Sbjct: 1101 HNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFS 1160

Query: 714  SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
             +E + +VH+F  GD SHP+   + + L E+   ++  GYVP    VL D++E+ K+  L
Sbjct: 1161 LVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAAL 1220

Query: 774  SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
            S+HSE+LA+AFGLI+TS    +R+ KNLR+C DCH+  KL+SK+ +R I+VRD +RFH F
Sbjct: 1221 SYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRF 1280

Query: 834  RQGSCSCSDFW 844
              G CSC D+W
Sbjct: 1281 EDGVCSCGDYW 1291



 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/729 (31%), Positives = 393/729 (53%), Gaps = 43/729 (5%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
            + C     + Q H  + K G+ H   + +K+    A+     SL  A+K FD     N 
Sbjct: 11  FQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCA---SLQAARKVFDETPHPN- 66

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
               + ++NS +R Y       E + L+ + +   G  PD FT P  L AC        G
Sbjct: 67  ----VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122

Query: 158 VQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
             +HG   K      D+FV + L+  Y +CG + +  +VF+E    + V WTS++    +
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182

Query: 217 RDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
            + P+EA+ LF +MV  + +  + VT+V V+SACA+L N++ G  V   +       +  
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +VN+L+++Y K G    A  LF +  +++++  +T+++ Y     A EAL +  EM+   
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 302

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
             P+ VT++SA+ A A   +L  G+  H   +  G E   S+   +IDMYMKC     +C
Sbjct: 303 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKC-----SC 357

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
                                      + A ++F  +P +D +SW  +L G  Q  M  +
Sbjct: 358 P--------------------------DEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYK 391

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           +M +FR MLS+ I+ D V +V + +A   LG    A  ++ Y+ ++G + ++ +  +L++
Sbjct: 392 SMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIE 451

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSI 574
           ++++CG    A+++F+ M  RDV  W++ I A  + G G +A+E+F++M++   ++P+++
Sbjct: 452 LYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNV 511

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ +L+ACSH GLV +G  +F  M   + + P   H+G MVDLLGR G LG+A+D+I  
Sbjct: 512 TFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINR 571

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           MP+     +WG+LL AC+ H N+++   AA+ +  LDP  +G ++LLSNIYA  GKW NV
Sbjct: 572 MPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNV 631

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           A +R ++KE+G++K+ G S +EV G VH F + D  HP+   I  +LR++  ++    Y+
Sbjct: 632 AELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYI 691

Query: 755 PDLTNVLLD 763
           PDL  +L D
Sbjct: 692 PDLDFLLHD 700



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 230/473 (48%), Gaps = 25/473 (5%)

Query: 7    PSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNE---LKQPHCHILKQGLGHK 63
            P    L   T   L    + K T     +IGS     T++    LK+ H  I   GL   
Sbjct: 692  PDLDFLLHDTGAVLQFWQRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGL--- 748

Query: 64   PSYISKVVCTCAQMG-TFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEA 122
              Y S+++   A M  +F  +  A   F+     +  +   F++N +IRG++  G  + +
Sbjct: 749  -QYDSRILTKFAIMYVSFNRIDAASIVFE-----DIPNPCSFLWNVMIRGFATDGRFLSS 802

Query: 123  ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
            + LY ++   G+ PDKF FPF L +C   S    G  +H  +V  G   D+FV+  L++ 
Sbjct: 803  LELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDM 862

Query: 183  YGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
            Y +CGDI   R VFD+M+ R++VSWTS+I   A      E +  F  M   G+ PN V++
Sbjct: 863  YAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSI 922

Query: 243  VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
            + V+ AC  L  L  G+   +Y+ + G + + L+  A++DMY KCG++D A+ LF E   
Sbjct: 923  LSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAG 982

Query: 303  RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-- 360
            ++LV  + ++++Y   G  R+A+ + D+M+  G RP  VT    +SA +  G L  G+  
Sbjct: 983  KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMY 1042

Query: 361  ---MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGL 416
               M   +V+   L  +      M+D+  + G+   A  + ++M  +   S W SL+   
Sbjct: 1043 FQLMTEEFVIARKLSNY----ACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC 1098

Query: 417  IKNGDVESAREVFSEMPGRD--HISWNTMLGGLTQENMFEEAMELFRVMLSER 467
              + +++ A ++   +   D  H  ++ +L  +         +E  R M++ R
Sbjct: 1099 RIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARR 1151



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 4/187 (2%)

Query: 466 ERIKV--DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
           +RIK    +   +G A     +      K  +A I   G+  D ++ T    M+      
Sbjct: 709 QRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRI 768

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A  VF  +       W   I   A +G    ++EL+++M+ +G+KPD   F   L +C
Sbjct: 769 DAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSC 828

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
           +    + +G  + + +    G S  +     +VD+  + G +  A  +   M V  + V 
Sbjct: 829 AGLSDLQRGKVIHQHLV-CCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVR-DLVS 886

Query: 644 WGSLLAA 650
           W S+++ 
Sbjct: 887 WTSMISG 893


>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
          Length = 1287

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/539 (40%), Positives = 335/539 (62%), Gaps = 2/539 (0%)

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
            DE+ +K +A+    ++    K G +  A+ L  +   R+++   ++++ Y R   A+EA
Sbjct: 104 FDEIPVK-DAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEA 162

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           +     ML  G  PD VT++  +SA +QL DL  G   H  V   G+   +++   +IDM
Sbjct: 163 VDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDM 222

Query: 385 YMKCGKQEMACRIFDHMSN-KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           Y KCG    A  +FD +   +   SWN++I G  K+G V+ AR +F +M  RD I++N+M
Sbjct: 223 YAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSM 282

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G        EA+ LF  M    ++VD  T+V + SAC  LGAL   + ++A IE   +
Sbjct: 283 ITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLV 342

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
             D+ + TAL+DM+ +CG    A  VF+RM KRDV AWTA I  +A  G G+  +E F +
Sbjct: 343 ETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQ 402

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M   G +P+ + ++ VLTACSH  L+N+G   F  M  ++ + PQI HYGCM+DLLGR+G
Sbjct: 403 MRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSG 462

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
           LL EA+DL+K+MP++PN VIW S+L+AC+ H+ +D+A  AAE + +++P++  V+V L N
Sbjct: 463 LLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYN 522

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           I   + KW + +++R+ M+E+ ++K  G SS+ V G+VH+F   D+SHP +  I +ML E
Sbjct: 523 ICIDSRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEE 582

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLR 802
           ++ RL+ AGY P  + V +DVDE+EK+  L  HSEKLA+AFGL+S +  +P+ ++KNLR
Sbjct: 583 ISHRLKSAGYSPITSQVTVDVDEEEKEQTLLAHSEKLAIAFGLVSLAPNLPVHIIKNLR 641



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 159/622 (25%), Positives = 284/622 (45%), Gaps = 47/622 (7%)

Query: 107  NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
            N +I G+   GL   A ++Y  +   GI     TF  +L  C+      E +Q+HG ++ 
Sbjct: 704  NRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTY----EALQLHGRVLA 759

Query: 167  MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            +G   + FV + L+N Y           +F E+  +N      ++       L +E +  
Sbjct: 760  LGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICC 819

Query: 227  FFEMVEEGIKPNSVTMVCVISACAKLQN---LELGDRVCAYIDELG-MKANALMVNALVD 282
            F +M  + ++ N ++    +  C   QN   LE G ++   + + G + +N  + N+LVD
Sbjct: 820  FLDMRRQYLELNGLSYCYAMKGC--YQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVD 877

Query: 283  MYMKCG-AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
            +Y   G +VDT K L  +    +++  N+I+S Y   G  +EA+  L +ML HG  P   
Sbjct: 878  LYSAIGDSVDTVKAL-NDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVR 936

Query: 342  TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMACRIFDH 400
            + +S ++ S + GD   G   HG V + G       +  T+IDMY KC      C  FDH
Sbjct: 937  SFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKC-----CC--FDH 989

Query: 401  MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
                                    +  +F+E+P       N+++      NMF+ A+E+ 
Sbjct: 990  ------------------------SLAIFNEIPSIALECCNSLITSSLGCNMFDAALEIL 1025

Query: 461  RVMLSERIKVDRVTMVGVASACGYLGALDLA--KWIYAYIEKNGIHCDMQLATALVDMFA 518
              M+ E +  D VT      A     +  L   + +++ + K G   DM + ++L+  +A
Sbjct: 1026 HCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYA 1085

Query: 519  RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
              G    +  +F  +   +V  +TA I A A  G+G +A+ELF++M+  G+KPD++ F+ 
Sbjct: 1086 CAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLC 1145

Query: 579  VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
             +  C   G+  +G  +   M     + P   H+ CMV+LL R G + EA+++++  P+ 
Sbjct: 1146 AIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLR 1205

Query: 639  PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
                 W SLL +C+ H    +   AA  + ++  +     + +SN +   G      R++
Sbjct: 1206 HYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIK 1265

Query: 699  LQMKEQGIRKLPGSSSIEVNGK 720
                 + ++K  G S IEV+ +
Sbjct: 1266 EMTNVKEVKK-SGHSLIEVSHR 1286



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 242/558 (43%), Gaps = 111/558 (19%)

Query: 101 ATLFMYNSLIRGYSCIGLGVEA------ISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
           A+ F++++ +R  +C   G  +        L+  +    + PD FTF F+   C+ SS  
Sbjct: 3   ASTFLFDTALR--ACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFK-CSSSSRP 59

Query: 155 GEGV--QVHGAIVKMGFDRDV-FVENCLINFYGECGDIVDGRRVFDEMSE---------- 201
              +   +H A ++        FV N LI+ Y E G   D RR FDE+            
Sbjct: 60  RALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVI 119

Query: 202 ---------------------RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
                                R+V+SWTSLI A +R D  KEAV  F  M+ EGI P+ V
Sbjct: 120 SGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDV 179

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC------------- 287
           T++ V+SAC++L++LELG  +   + E GM  +  +V AL+DMY KC             
Sbjct: 180 TVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAV 239

Query: 288 -------------------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
                              G VD A+ LF + + R+++  N++++ Y+  G  REAL + 
Sbjct: 240 GRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLF 299

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
             M  H  R D  T++S +SA A LG L  GR  H  +    +E    I   ++DMYMKC
Sbjct: 300 MNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKC 359

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G+   A  +F  M  + V +W ++IAGL  NG                            
Sbjct: 360 GRVNEATIVFQRMGKRDVHAWTAMIAGLAFNG---------------------------- 391

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDM 507
              M +  +E F  M  +  + + V+ + V +AC +   L+  +  +  +     IH  +
Sbjct: 392 ---MGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQI 448

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGNGEQAVELFNEMLR 566
           +    ++D+  R G    AM + + M  +  S  W + + A  +    + A      +L+
Sbjct: 449 EHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLK 508

Query: 567 QGIKPDS-IVFVGVLTAC 583
             I+PD   V+V +   C
Sbjct: 509 --IEPDEDAVYVQLYNIC 524



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 137/318 (43%), Gaps = 40/318 (12%)

Query: 13  ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISK 69
           A   V    N       P D   IG L  C  L +L+     H  + ++G+    + +  
Sbjct: 159 AKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVA 218

Query: 70  VVCTCAQMGTFESLTYAQKAFDY----------------YIKDN--ETSATLF------- 104
           ++   A+ G F    +A++ FD                 Y K    + + +LF       
Sbjct: 219 LIDMYAKCGDF---GHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRD 275

Query: 105 --MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
              +NS+I GY   G   EA+ L++ +    +  D FT   +L+AC    A  +G  +H 
Sbjct: 276 IITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHA 335

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            I     + D+++   L++ Y +CG + +   VF  M +R+V +WT++I   A   + K 
Sbjct: 336 CIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKA 395

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL----MVN 278
            +  F++M  +G +PN V+ + V++AC+    L  G     Y DE+ +  N         
Sbjct: 396 GLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGR---LYFDEMRILYNIHPQIEHYG 452

Query: 279 ALVDMYMKCGAVDTAKQL 296
            ++D+  + G +D A  L
Sbjct: 453 CMIDLLGRSGLLDEAMDL 470



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 126/265 (47%), Gaps = 3/265 (1%)

Query: 100  SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
            S  +  +NS++  Y+  G   EA+    ++   G +P   +F  +L    K+  +  GVQ
Sbjct: 897  SEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQ 956

Query: 160  VHGAIVKMGFD-RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            +HG + K+GF    V V+  LI+ YG+C        +F+E+    +    SLI +    +
Sbjct: 957  IHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCN 1016

Query: 219  LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG--DRVCAYIDELGMKANALM 276
            +   A+ +   M+ EG+ P+ VT    + A +   +  L     + + + +LG + +  +
Sbjct: 1017 MFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAV 1076

Query: 277  VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
             ++L+  Y   G + ++  +F    D N++    I+S   R G    A+ + D+M+  G 
Sbjct: 1077 CSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGL 1136

Query: 337  RPDRVTMLSAVSASAQLGDLLCGRM 361
            +PD VT L A++   Q G    GR+
Sbjct: 1137 KPDNVTFLCAIAGCDQAGMFEEGRL 1161


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/669 (35%), Positives = 375/669 (56%), Gaps = 17/669 (2%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N +++ Y   G   + R++FDEMSERNVVSW  L+    +  +  EA  +F  M E    
Sbjct: 52  NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPER--- 108

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
            N V+   ++    +   +   + +   + E    +  +M   L+D     G +D A++L
Sbjct: 109 -NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKARKL 163

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           +     +++V    ++    R G   EA  I DEM       + VT  + ++   Q   +
Sbjct: 164 YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM----RERNVVTWTTMITGYRQNNRV 219

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
              R     +       W S    M+  Y   G+ E A   F+ M  K V++ N++I G 
Sbjct: 220 DVARKLFEVMPEKTEVSWTS----MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF 275

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            + G++  AR VF  M  RD+ +W  M+    ++    EA++LF  M  + ++    +++
Sbjct: 276 GEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLI 335

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            + S C  L +L   + ++A++ +     D+ +A+ L+ M+ +CG+  +A  VF R   +
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK 395

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D+  W + I   A  G GE+A+++F+EM   G  P+ +  + +LTACS+ G + +G  +F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
            SM     V+P + HY C VD+LGRAG + +A++LI+SM ++P+  +WG+LL AC+ H  
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
           +D+A  AA+++ E +P+ +G +VLLS+I AS  KW +VA VR  M+   + K PG S IE
Sbjct: 516 LDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575

Query: 717 VNGKVHEFTSGD-ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
           V  KVH FT G  ++HPE   I  ML + +  LR+AGY PD ++VL DVDE+EK   LS 
Sbjct: 576 VGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635

Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
           HSE+LA+A+GL+   + +PIRV+KNLR+C DCH+  KL+SKV +REII+RD NRFH F  
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695

Query: 836 GSCSCSDFW 844
           G CSC D+W
Sbjct: 696 GECSCRDYW 704



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 217/498 (43%), Gaps = 95/498 (19%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAG-------------------------FGILPDK-- 138
           +NS++ GY   GL  EA  L+ E++                          F ++P++  
Sbjct: 51  WNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV 110

Query: 139 FTFPFVLNACTKSSAFGEG---------------VQVHGAIVKMG--------FD----R 171
            ++  ++    +    GE                  + G ++  G        +D    +
Sbjct: 111 VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK 170

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           DV     +I      G + + R +FDEM ERNVV+WT++I    R++   +     FE++
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITG-YRQNNRVDVARKLFEVM 229

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
            E  + +  +M+   +   ++++ E       + + + MK   +  NA++  + + G + 
Sbjct: 230 PEKTEVSWTSMLLGYTLSGRIEDAE------EFFEVMPMKP-VIACNAMIVGFGEVGEIS 282

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A+++F   +DR+      ++  Y R G   EAL +  +M   G RP   +++S +S  A
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
            L  L  GR  H +++R   +    + + ++ MY+KCG+   A  +FD  S+K ++ WNS
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           +I+G   +G  E A ++F EMP     S  TM                           +
Sbjct: 403 IISGYASHGLGEEALKIFHEMP-----SSGTM--------------------------PN 431

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           +VT++ + +AC Y G L+    I+  +E K  +   ++  +  VDM  R G   +AM++ 
Sbjct: 432 KVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELI 491

Query: 531 RRME-KRDVSAWTAAIGA 547
             M  K D + W A +GA
Sbjct: 492 ESMTIKPDATVWGALLGA 509



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 10/233 (4%)

Query: 69  KVVCTCAQM----GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           K V  C  M    G    ++ A++ FD  + ++  +AT   +  +I+ Y   G  +EA+ 
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFD--LMEDRDNAT---WRGMIKAYERKGFELEALD 317

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L+ ++   G+ P   +   +L+ C   ++   G QVH  +V+  FD DV+V + L+  Y 
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV 377

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG++V  + VFD  S ++++ W S+I   A   L +EA+ +F EM   G  PN VT++ 
Sbjct: 378 KCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIA 437

Query: 245 VISACAKLQNLELGDRVCAYID-ELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           +++AC+    LE G  +   ++ +  +       +  VDM  + G VD A +L
Sbjct: 438 ILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 186/432 (43%), Gaps = 84/432 (19%)

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM----------LLHG 335
           + G ++ A++ F   + + +   N+I+S Y   GL +EA  + DEM          L+ G
Sbjct: 29  RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSG 88

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGR-------MCHGYVLRNGLEG--------------- 373
              +R+     +  +  + +L+  R       M  GY ++ G+ G               
Sbjct: 89  YIKNRM-----IVEARNVFELMPERNVVSWTAMVKGY-MQEGMVGEAESLFWRMPERNEV 142

Query: 374 -WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            W  +   +ID     G+ + A +++D M  K VV+  ++I GL + G V+ AR +F EM
Sbjct: 143 SWTVMFGGLID----DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM 198

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
             R+ ++W TM+ G  Q N  + A +LF VM  E+ +V   +M+   +  G +   D  +
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVM-PEKTEVSWTSMLLGYTLSGRIE--DAEE 255

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
           +      K  I C+     A++  F   G+  +A +VF  ME RD + W   I A   +G
Sbjct: 256 FFEVMPMKPVIACN-----AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW----HLFRSMTD----IHG 604
              +A++LF +M +QG++P     + +L+ C+    +  G     HL R   D    +  
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370

Query: 605 V----------------------SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE---P 639
           V                      S  I+ +  ++      GL  EAL +   MP     P
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP 430

Query: 640 NDVIWGSLLAAC 651
           N V   ++L AC
Sbjct: 431 NKVTLIAILTAC 442



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 17/262 (6%)

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
           C+  I    + GK   A + FD +  K + SWNS+++G   NG  + AR++F EM  R+ 
Sbjct: 20  CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV 79

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           +SWN ++ G  +  M  EA  +F +M  ER  V    MV      G +G  +   W    
Sbjct: 80  VSWNGLVSGYIKNRMIVEARNVFELM-PERNVVSWTAMVKGYMQEGMVGEAESLFWRMP- 137

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            E+N +   +     + D     G   +A +++  M  +DV A T  IG +  EG  ++A
Sbjct: 138 -ERNEVSWTVMFGGLIDD-----GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEA 191

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
             +F+EM  + +    + +  ++T       V+    LF  M +   VS   +  G  + 
Sbjct: 192 RLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTL- 246

Query: 618 LLGRAGLLGEALDLIKSMPVEP 639
               +G + +A +  + MP++P
Sbjct: 247 ----SGRIEDAEEFFEVMPMKP 264



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 55/266 (20%)

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           I+ L + G +  AR+ F  +  +   SWN+++ G     + +EA +LF  M SER   + 
Sbjct: 24  ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM-SER---NV 79

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           V+  G+ S  GY+              KN +  +                   A  VF  
Sbjct: 80  VSWNGLVS--GYI--------------KNRMIVE-------------------ARNVFEL 104

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           M +R+V +WTA +     EG   +A  LF  M  +     +++F         GGL++ G
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF---------GGLIDDG 155

Query: 593 W-HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
                R + D+  V   +V    M+  L R G + EA  +   M  E N V W +++   
Sbjct: 156 RIDKARKLYDMMPVK-DVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGY 213

Query: 652 QKHQNVDIAAYAAERITELDPEKSGV 677
           +++  VD+    A ++ E+ PEK+ V
Sbjct: 214 RQNNRVDV----ARKLFEVMPEKTEV 235


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/614 (37%), Positives = 340/614 (55%), Gaps = 37/614 (6%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+  T   +I  C    +L    RV  +I + G   +  +   L+ MY   G+VD A+++
Sbjct: 75  PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT----MLSAVSASAQ 352
           F + + R + + N +       G   E L +  +M   G   DR T    + + V++   
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           +  L+ G+  H ++ R G      I  T++DMY + G     C                 
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG-----C----------------- 232

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER--IKV 470
                    V+ A  VF  MP R+ +SW+ M+    +     EA+  FR M+ E      
Sbjct: 233 ---------VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           + VTMV V  AC  L AL+  K I+ YI + G+   + + +ALV M+ RCG  +   +VF
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
            RM  RDV +W + I +  + G G++A+++F EML  G  P  + FV VL ACSH GLV 
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G  LF +M   HG+ PQI HY CMVDLLGRA  L EA  +++ M  EP   +WGSLL +
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H NV++A  A+ R+  L+P+ +G +VLL++IYA A  W  V RV+  ++ +G++KLP
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G   +EV  K++ F S DE +P M  I + L ++   +++ GY+P    VL +++ +EK+
Sbjct: 524 GRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKE 583

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
            ++  HSEKLA+AFGLI+TSK  PIR+ KNLRLC DCH F K +SK  ++EI+VRD NRF
Sbjct: 584 RIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRF 643

Query: 831 HFFRQGSCSCSDFW 844
           H F+ G CSC D+W
Sbjct: 644 HRFKNGVCSCGDYW 657



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 209/402 (51%), Gaps = 20/402 (4%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +L++  + H HIL  G    P   +K++   + +G   S+ YA+K FD   K      T+
Sbjct: 92  SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG---SVDYARKVFDKTRKR-----TI 143

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS----SAFGEGVQ 159
           +++N+L R  +  G G E + LY ++   G+  D+FT+ +VL AC  S    +   +G +
Sbjct: 144 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 203

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  + + G+   V++   L++ Y   G +     VF  M  RNVVSW+++I   A+   
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 263

Query: 220 PKEAVYLFFEMVEE--GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
             EA+  F EM+ E     PNSVTMV V+ ACA L  LE G  +  YI   G+ +   ++
Sbjct: 264 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 323

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           +ALV MY +CG ++  +++F    DR++V  N+++S+Y   G  ++A+ I +EML +G  
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 383

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACR 396
           P  VT +S + A +  G +  G+     + R+ G++        M+D+  +  + + A +
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAK 443

Query: 397 IFDHMSNKTVVS-WNSLIAGLIKNGDVE----SAREVFSEMP 433
           +   M  +     W SL+     +G+VE    ++R +F+  P
Sbjct: 444 MVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 178/338 (52%), Gaps = 10/338 (2%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P + T+  ++  C   S+  + ++VH  I+  G D+D F+   LI  Y + G +   R+V
Sbjct: 75  PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA----K 251
           FD+  +R +  W +L  A       +E + L+++M   G++ +  T   V+ AC      
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           + +L  G  + A++   G  ++  ++  LVDMY + G VD A  +FG    RN+V  + +
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254

Query: 312 MSNYVRLGLAREALAILDEML--LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++ Y + G A EAL    EM+       P+ VTM+S + A A L  L  G++ HGY+LR 
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL+    + + ++ MY +CGK E+  R+FD M ++ VVSWNSLI+    +G  + A ++F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374

Query: 430 SEM----PGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
            EM         +++ ++LG  + E + EE   LF  M
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/665 (34%), Positives = 361/665 (54%), Gaps = 31/665 (4%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           Y+ DN       ++N ++ GY   G    AI +++E+    I P+  TF  VL+ C   +
Sbjct: 114 YLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEA 173

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G Q+HG  V  G + D  V N L+  Y +C  +   R++FD   + ++VSW  +I 
Sbjct: 174 MLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIIS 233

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
              +  L  EA +LF  M+  GIKP+S+T    +    +L +L+    +  YI    +  
Sbjct: 234 GYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL 293

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +  + +AL+D+Y KC  V+ A+++  +    + V+C T++S YV  G  +EAL     ++
Sbjct: 294 DVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLV 353

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               +P  VT  S   A A L  L  G+  HG +++  L+    + + ++DMY KCG+ +
Sbjct: 354 QERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLD 413

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +ACR+F+ ++ K                               D I WN+M+   +Q   
Sbjct: 414 LACRVFNRITEK-------------------------------DAICWNSMITSCSQNGR 442

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
             EA+ LFR M  E  + D V++ G  SAC  L AL   K I+  + K  +  D+   ++
Sbjct: 443 PGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESS 502

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+DM+A+CG+   + +VF RM++R+  +W + I A    G+ ++ + LF+EMLR GI+PD
Sbjct: 503 LIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPD 562

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + F+G+++AC H G V++G   +  MT+ +G+  ++ HY C+ D+ GRAG L EA + I
Sbjct: 563 HVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETI 622

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
            SMP  P+  +WG+LL AC  H NV++A  A++ + +LDP  SG +VLL+N+ A AGKW 
Sbjct: 623 NSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWR 682

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            V +VR  MKE+G+RK+PG S IEVN   H F + D SHP    I S+L  +   L+  G
Sbjct: 683 KVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEG 742

Query: 753 YVPDL 757
           YVP L
Sbjct: 743 YVPQL 747



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 169/582 (29%), Positives = 286/582 (49%), Gaps = 50/582 (8%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SL  A+  F Y ++   TSA    +N +IRG++ +G    A+  Y+++ G G+ PDK+TF
Sbjct: 7   SLKDAKNLF-YTLQLGCTSA----WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
           P+V+ AC    +   G  VH  +  MG   DVFV + LI  Y E G + D + +FD + +
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           ++ V W  ++    +      A+ +F EM    IKPNSVT  CV+S CA    L+LG ++
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
                  G++ ++ + N L+ MY KC  +  A++LF      +LV  N I+S YV+ GL 
Sbjct: 182 HGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLM 241

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EA  +   M+  G +PD +T  S +    +L  L   +  HGY++R+ +     + + +
Sbjct: 242 GEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSAL 301

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           ID+Y KC   EMA +I    S+   V   ++I+G + NG                     
Sbjct: 302 IDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKN------------------- 342

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                       +EA+E FR ++ ER+K   VT   +  A   L AL+L K ++  I K 
Sbjct: 343 ------------KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +     + +A++DM+A+CG    A +VF R+ ++D   W + I + +  G   +A+ LF
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG------VSPQIVHYGCM 615
            +M  +G + D +   G L+AC++   ++ G        +IHG      +   +     +
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYG-------KEIHGLMIKGPLRSDLYAESSL 503

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           +D+  + G L  +  +   M  E N+V W S+++A   H ++
Sbjct: 504 IDMYAKCGNLNFSRRVFDRMQ-ERNEVSWNSIISAYGNHGDL 544



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 115/265 (43%), Gaps = 33/265 (12%)

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
           ++ G ++ A+ +F  +      +WN M+ G T    F  A+  +  ML   +  D+ T  
Sbjct: 3   VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFP 62

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V  AC  L ++ + K ++  +   G+  D+ + ++L+ ++A  G    A  +F  + ++
Sbjct: 63  YVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHL- 595
           D   W   +      G+   A+++F EM    IKP+S+ F  VL+ C+   +++ G  L 
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182

Query: 596 ---------------------------FRSMTDIHGVSPQ--IVHYGCMVDLLGRAGLLG 626
                                       ++   +   SPQ  +V +  ++    + GL+G
Sbjct: 183 GIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMG 242

Query: 627 EALDLIKSM---PVEPNDVIWGSLL 648
           EA  L + M    ++P+ + + S L
Sbjct: 243 EAEHLFRGMISAGIKPDSITFASFL 267



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ R G  + A  +F  ++    SAW   I    M G    A+  + +ML  G+ PD   
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F  V+ AC     V  G  +     ++ G+   +     ++ L    G L +A  L  ++
Sbjct: 61  FPYVVKACCGLKSVKMG-KIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 636 PVEPNDVIWGSLLAACQKHQNVD--IAAYAAERITELDPEKSGVHVLLS 682
           P + + V+W  +L    K+ +    I  +   R +E+ P       +LS
Sbjct: 120 P-QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLS 167


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 254/707 (35%), Positives = 376/707 (53%), Gaps = 55/707 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+++ GYS  G    A SL+  +      PD +++  +L+A   SS+  +     G   
Sbjct: 72  YNAMLAGYSANGRLPLAASLFRAIP----RPDNYSYNTLLHALAVSSSLADA---RGLFD 124

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           +M   RD    N +I+ +   G +   R  FD   E++ VSW  ++ A  R    +EA  
Sbjct: 125 EMPV-RDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARG 183

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           LF          NS T   VIS                              NAL+  Y+
Sbjct: 184 LF----------NSRTEWDVIS-----------------------------WNALMSGYV 204

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           + G +  A++LF     R++V  N ++S Y R G   EA  + D      P  D  T  +
Sbjct: 205 QWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA----APVRDVFTWTA 260

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            VS  AQ G L   R     +       W    N M+  Y++    + A  +F+ M  + 
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSW----NAMVAAYIQRRMMDEAKELFNMMPCRN 316

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           V SWN+++ G  + G +E A+ VF  MP +D +SW  ML   +Q    EE ++LF  M  
Sbjct: 317 VASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGR 376

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
               V+R     V S C  + AL+    ++  + + G      +  AL+ M+ +CG+ + 
Sbjct: 377 CGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED 436

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A   F  ME+RDV +W   I   A  G G++A+E+F+ M     KPD I  VGVL ACSH
Sbjct: 437 ARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH 496

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
            GLV +G   F SM    GV+ +  HY CM+DLLGRAG L EA DL+K MP EP+  +WG
Sbjct: 497 SGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWG 556

Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +LL A + H+N ++   AAE+I EL+PE +G++VLLSNIYAS+GKW +  ++R+ M+E+G
Sbjct: 557 ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERG 616

Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
           ++K+PG S IEV  KVH F++GD  HPE   I + L +++ R++ AGYV     VL DV+
Sbjct: 617 VKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVE 676

Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
           E+EK+++L +HSEKLA+A+G+++     PIRV+KNLR+C DCH+  K
Sbjct: 677 EEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFK 723



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           AQ G  E    A+  FD   + +  S     + +++  YS  G   E + L++E+   G 
Sbjct: 328 AQAGMLEE---AKAVFDTMPQKDAVS-----WAAMLAAYSQGGCSEETLQLFIEMGRCGE 379

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
             ++  F  VL+ C   +A   G+Q+HG +++ G+    FV N L+  Y +CG++ D R 
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
            F+EM ER+VVSW ++I   AR    KEA+ +F  M     KP+ +T+V V++AC+    
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499

Query: 255 LELG-DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           +E G     +   + G+ A       ++D+  + G +  A  L
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 177/423 (41%), Gaps = 92/423 (21%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           ++ T   +  +N+L+ GY   G   EA  L+  + G     D  ++  +++   +     
Sbjct: 186 NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMV 241

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           E  ++  A       RDVF    +++ Y + G + + RRVFD M ERN VSW +++ A  
Sbjct: 242 EARRLFDAAPV----RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 297

Query: 216 RRDLPKEAVYLF--------------------FEMVEEG-------IKPNSVTMVCVISA 248
           +R +  EA  LF                      M+EE         + ++V+   +++A
Sbjct: 298 QRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357

Query: 249 CAK-------LQ-NLELGD--------------RVCAYIDEL--GMKANALMV------- 277
            ++       LQ  +E+G                 CA I  L  GM+ +  ++       
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417

Query: 278 ----NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
               NAL+ MY KCG ++ A+  F E ++R++V  NT+++ Y R G  +EAL I D M  
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQ 391
              +PD +T++  ++A +  G +  G + + Y + +  G+         MID+  + G+ 
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKG-ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRL 536

Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
             A                     L+K+   E    ++  + G   I  N  LG    E 
Sbjct: 537 AEA-------------------HDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEK 577

Query: 452 MFE 454
           +FE
Sbjct: 578 IFE 580



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 39/304 (12%)

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           S  N M+  Y   G+  +A  +F  +      S+N+L+  L  +  +  AR +F EMP R
Sbjct: 70  STYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR 129

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           D +++N M+       +   A   F +   +    D V+  G+ +A    G ++ A+ ++
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYFDLAPEK----DAVSWNGMLAAYVRNGRVEEARGLF 185

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
                +    D+    AL+  + + G    A ++F RM  RDV +W   +   A  G+  
Sbjct: 186 ----NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMV 241

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS--------- 606
           +A  LF+    +    D   +  V++  +  G++ +   +F +M + + VS         
Sbjct: 242 EARRLFDAAPVR----DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 297

Query: 607 -----------------PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
                              +  +  M+    +AG+L EA  +  +MP + + V W ++LA
Sbjct: 298 QRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLA 356

Query: 650 ACQK 653
           A  +
Sbjct: 357 AYSQ 360



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 110/283 (38%), Gaps = 43/283 (15%)

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV--- 462
           V+  N  I   ++ G V  A  +F+ MP R   ++N ML G +       A  LFR    
Sbjct: 38  VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR 97

Query: 463 ------------------------MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
                                   +  E    D VT   + S+    G + LA+  +   
Sbjct: 98  PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLA 157

Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
            EK+ +  +  LA      + R G  + A  +F    + DV +W A +      G   +A
Sbjct: 158 PEKDAVSWNGMLAA-----YVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEA 212

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
            ELF+ M  + +   +I+  G       G +V       R + D   V   +  +  +V 
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGY---ARRGDMVEA-----RRLFDAAPVR-DVFTWTAVVS 263

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
              + G+L EA  +  +MP E N V W +++AA  + + +D A
Sbjct: 264 GYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDEA 305


>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/621 (37%), Positives = 351/621 (56%), Gaps = 61/621 (9%)

Query: 236 KPNSVT--------MVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
           KPN+ T        ++ +I  C  L+ L+   ++ AY  +   + N  ++   ++     
Sbjct: 15  KPNTETTSLLPLPHLISLIPKCTTLKELK---QIQAYTIKTNYQNNTNVITKFINFCTSN 71

Query: 288 ---GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
               +++ A QLF +    N+VL NT+   Y RL    + L     M+ H  R  R  ++
Sbjct: 72  PTKASMEHAHQLFDQITQPNIVLFNTMARGYARLN---DPL----RMITHFRRCLR--LV 122

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S V A A+      G+  H + ++ G+     +  T+I+MY  CG               
Sbjct: 123 SKVKALAE------GKQLHCFAVKLGVSDNMYVVPTLINMYTACG--------------- 161

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                           D++++R VF ++     +++N ++  L + N   EA+ LFR + 
Sbjct: 162 ----------------DIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQ 205

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              +K   VTM+ V S+C  LG+LDL +W++ Y++K G    +++ T L+DM+A+CG   
Sbjct: 206 EIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLD 265

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A+ VFR M KRD  AW+A I A A  G+G QA+ + NEM ++ ++PD I F+G+L ACS
Sbjct: 266 DAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACS 325

Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
           H GLV +G+  F  MT+ +G+ P I HYGCMVDLLGRAG L EA   I  +P++P  ++W
Sbjct: 326 HNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILW 385

Query: 645 GSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQ 704
            +LL+AC  H NV++     ERI ELD    G +V+ SN+ A  GKW +V  +R  M ++
Sbjct: 386 RTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDK 445

Query: 705 GIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL-D 763
           G  K+PG SSIEVN  VHEF +G+  H     +   L E+   L+ AGYVPD + V   D
Sbjct: 446 GAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYAD 505

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           ++++EK+ +L +HSEKLA+ FGL++T     IRVVKNLR+C DCH+ AK +S ++ R+II
Sbjct: 506 MEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQII 565

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           +RD  RFH F+ G CSC D+W
Sbjct: 566 LRDVQRFHHFKDGKCSCGDYW 586



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 206/420 (49%), Gaps = 23/420 (5%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTC 74
           T  +LT  +   T+    P + SL   C TL ELKQ   + +K    +  + I+K +  C
Sbjct: 9   TSFSLTKPNTETTSLLPLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFC 68

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
               T  S+ +A + FD   + N     + ++N++ RGY+ +   +  I+          
Sbjct: 69  TSNPTKASMEHAHQLFDQITQPN-----IVLFNTMARGYARLNDPLRMIT---------- 113

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
                 F   L   +K  A  EG Q+H   VK+G   +++V   LIN Y  CGDI   RR
Sbjct: 114 -----HFRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRR 168

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFD++ E  VV++ ++I + AR +   EA+ LF E+ E G+KP  VTM+ V+S+CA L +
Sbjct: 169 VFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGS 228

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           L+LG  +  Y+ + G      +   L+DMY KCG++D A  +F +   R+    + I+  
Sbjct: 229 LDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVA 288

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEG 373
           Y   G   +A+++L+EM     +PD +T L  + A +  G +  G    HG     G+  
Sbjct: 289 YATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVP 348

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNGDVESAREVFSEM 432
                  M+D+  + G+ + A +  D +  K T + W +L++    +G+VE  + V   +
Sbjct: 349 SIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERI 408



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 201/469 (42%), Gaps = 58/469 (12%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC---GDIVDGRRVFD 197
            P +++   K +   E  Q+    +K  +  +  V    INF         +    ++FD
Sbjct: 26  LPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFD 85

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
           ++++ N+V + ++    AR + P   +  F                  +   +K++ L  
Sbjct: 86  QITQPNIVLFNTMARGYARLNDPLRMITHFRR---------------CLRLVSKVKALAE 130

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G ++  +  +LG+  N  +V  L++MY  CG +D ++++F +  +  +V  N I+ +  R
Sbjct: 131 GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLAR 190

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
              A EALA+  E+   G +P  VTML  +S+ A LG L  GR  H YV + G + +  +
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKV 250

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
             T+IDMY KCG                                ++ A  VF +MP RD 
Sbjct: 251 NTTLIDMYAKCGS-------------------------------LDDAVNVFRDMPKRDT 279

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYA 496
            +W+ ++          +A+ +   M  E+++ D +T +G+  AC + G ++   ++ + 
Sbjct: 280 QAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHG 339

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGN-- 553
              + GI   ++    +VD+  R G    A +    +  +     W   + A +  GN  
Sbjct: 340 MTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVE 399

Query: 554 -GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            G++ +E   E L      D ++F  +   C+  G  +   HL ++M D
Sbjct: 400 MGKRVIERIFE-LDDSHGGDYVIFSNL---CARYGKWDDVNHLRKTMID 444


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/574 (38%), Positives = 336/574 (58%), Gaps = 21/574 (3%)

Query: 278 NALVDMYMK-CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           N ++  Y K  G V  A +LF +  + + V  N ++  Y+R      ALA  ++M    P
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKM----P 163

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVL------RNGLEGWDSICNTMIDMYMKCGK 390
             D  +  + +S  AQ      G+M   + L      +NG+  W +    MI  Y++ G 
Sbjct: 164 VKDIASWNTLISGFAQ-----NGQMQKAFDLFSVMPEKNGV-SWSA----MISGYVEHGD 213

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A  ++ ++  K+VV   +++ G +K G VE A  +F  M  ++ ++WN+M+ G  + 
Sbjct: 214 LEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVEN 273

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
              E+ +++F+ M+  R++ + +++  V   C  L AL L + ++  + K+ +  D    
Sbjct: 274 CRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTAC 333

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           T+L+ M+ +CGD   A ++F  M ++DV +W A I   A  G G +A+ LF++M    +K
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD I FV V+ AC+H G V+ G   F+SM    G+  + VHY C++DLLGRAG L EA+ 
Sbjct: 394 PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVS 453

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           LIK MP +P+  I+G+LL AC+ H+N+D+A +AA  +  LDP  +  +V L+NIYA+  K
Sbjct: 454 LIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNK 513

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W  VA+VR  MKE  + K+PG S IE+    HEF S D  HPE+ +I   L E++ +++ 
Sbjct: 514 WDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKL 573

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           AGYVPDL   L DV+E+ K+ LL  HSEKLA+AFGL+ T+   PIRV KNLR+C DCH  
Sbjct: 574 AGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRA 633

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +S +  REIIVRD  RFH FR G CSC D+W
Sbjct: 634 IKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 169/360 (46%), Gaps = 41/360 (11%)

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           F++M  +++ SW +LI   A+    ++A  LF  M E+    N V+   +IS   +  +L
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGDL 214

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           E  + +      +GMK+  ++  A++  YMK G V+ A+++F     +NLV  N++++ Y
Sbjct: 215 EAAEEL---YKNVGMKS-VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGY 270

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           V    A + L +   M+    RP+ +++ S +   + L  L  GR  H  V ++ L    
Sbjct: 271 VENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDT 330

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           + C ++I MY KCG  + A ++F  M  K V+SWN++I+G  ++G             GR
Sbjct: 331 TACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHG------------AGR 378

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                              +A+ LF  M +  +K D +T V V  AC + G +DL    +
Sbjct: 379 -------------------KALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYF 419

Query: 496 AYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
             ++K  GI       T ++D+  R G    A+ + + M  K   + +   +GA  +  N
Sbjct: 420 KSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKN 479



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 157/347 (45%), Gaps = 30/347 (8%)

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           SY   +VC     G   +L +  K     +KD      +  +N+LI G++  G   +A  
Sbjct: 138 SYNIMLVCYLRSYGVEAALAFFNKM---PVKD------IASWNTLISGFAQNGQMQKAFD 188

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG------AIVKMGFDRDVFVENC 178
           L      F ++P+K    +        SA   G   HG       + K    + V VE  
Sbjct: 189 L------FSVMPEKNGVSW--------SAMISGYVEHGDLEAAEELYKNVGMKSVVVETA 234

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           ++  Y + G +    R+F  M+ +N+V+W S+I         ++ + +F  M+E  ++PN
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPN 294

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            +++  V+  C+ L  L LG ++   + +  +  +     +L+ MY KCG +D+A +LF 
Sbjct: 295 PLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFL 354

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           E   ++++  N ++S Y + G  R+AL + D+M     +PD +T ++ + A    G +  
Sbjct: 355 EMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDL 414

Query: 359 GRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           G      + +  G+E        +ID+  + G+ + A  +   M  K
Sbjct: 415 GVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 54/314 (17%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK-NGDVESAREV--------- 428
           N  I  +++    E A  +F+ MS +T V+WN++++G  K  G V+ A E+         
Sbjct: 77  NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDS 136

Query: 429 ----------------------FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                                 F++MP +D  SWNT++ G  Q    ++A +LF VM  E
Sbjct: 137 VSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM-PE 195

Query: 467 RIKVDRVTMVGVASACGYL--GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           +  V    M+      GY+  G L+ A+ +Y    KN     + + TA++  + + G  +
Sbjct: 196 KNGVSWSAMIS-----GYVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKVE 246

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A ++F+RM  +++  W + I         E  +++F  M+   ++P+ +    VL  CS
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306

Query: 585 HGGLVNQGWHLFRSMTDIHGVSP---QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           +   +  G    R M  +   SP          ++ +  + G L  A  L   MP +  D
Sbjct: 307 NLSALPLG----RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRK--D 360

Query: 642 VI-WGSLLAACQKH 654
           VI W ++++   +H
Sbjct: 361 VISWNAMISGYAQH 374


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/574 (38%), Positives = 335/574 (58%), Gaps = 21/574 (3%)

Query: 278 NALVDMYMK-CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           N ++  Y K  G V  A +LF +  + + V  N ++  Y+R    + ALA  ++M    P
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKM----P 163

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVL------RNGLEGWDSICNTMIDMYMKCGK 390
             D  +  + +S  AQ      G+M   + L      +NG+  W +    MI  Y++ G 
Sbjct: 164 VKDIASWNTLISGFAQ-----NGQMQKAFDLFSVMPEKNGV-SWSA----MISGYVEHGD 213

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
            E A  ++ ++  K+VV   +++ G +K G VE A  +F  M  ++ ++WN+M+ G  + 
Sbjct: 214 LEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVEN 273

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
              E+ +++F+ M+  R++ + +++  V   C  L AL L + ++  + K+ +  D    
Sbjct: 274 CRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTAC 333

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           T+L+ M+ +CGD   A ++F  M ++DV  W A I   A  G G +A+ LF++M    +K
Sbjct: 334 TSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMK 393

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
           PD I FV V+ AC+H G V+ G   F+SM    G+  + VHY C++DLLGRAG L EA+ 
Sbjct: 394 PDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVS 453

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           LIK MP  P+  I+G+LL AC+ H+N+D+A +AA  +  LDP  +  +V L+NIYA+  K
Sbjct: 454 LIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNK 513

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W  VA+VR  MKE  + K+PG S IE+    HEF S D  HPE+ +I   L E++ +++ 
Sbjct: 514 WDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKL 573

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
           AGYVPDL   L DV+E+ K+ LL  HSEKLA+AFGL+ T+   PIRV KNLR+C DCH  
Sbjct: 574 AGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRA 633

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +S +  REIIVRD  RFH FR G CSC D+W
Sbjct: 634 IKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 161/339 (47%), Gaps = 40/339 (11%)

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           F++M  +++ SW +LI   A+    ++A  LF  M E+    N V+   +IS   +  +L
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGDL 214

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
           E  + +      +GMK+  ++  A++  YMK G V+ A+++F     +NLV  N++++ Y
Sbjct: 215 EAAEEL---YKNVGMKS-VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGY 270

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           V    A + L +   M+    RP+ +++ S +   + L  L  GR  H  V ++ L    
Sbjct: 271 VENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDT 330

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           + C ++I MY KCG  + A ++F  M  K V++WN++I+G  ++G             GR
Sbjct: 331 TACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHG------------AGR 378

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                              +A+ LF  M +  +K D +T V V  AC + G +DL    +
Sbjct: 379 -------------------KALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYF 419

Query: 496 AYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
             ++K  GI       T ++D+  R G    A+ + + M
Sbjct: 420 KSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 156/344 (45%), Gaps = 30/344 (8%)

Query: 65  SYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
           SY   +VC     G   +L +  K     +KD      +  +N+LI G++  G   +A  
Sbjct: 138 SYNIMLVCYLRSYGVKAALAFFNKM---PVKD------IASWNTLISGFAQNGQMQKAFD 188

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG------AIVKMGFDRDVFVENC 178
           L      F ++P+K    +        SA   G   HG       + K    + V VE  
Sbjct: 189 L------FSVMPEKNGVSW--------SAMISGYVEHGDLEAAEELYKNVGMKSVVVETA 234

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           ++  Y + G +    R+F  M+ +N+V+W S+I         ++ + +F  M+E  ++PN
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPN 294

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            +++  V+  C+ L  L LG ++   + +  +  +     +L+ MY KCG +D+A +LF 
Sbjct: 295 PLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFL 354

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           E   ++++  N ++S Y + G  R+AL + D+M     +PD +T ++ + A    G +  
Sbjct: 355 EMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDL 414

Query: 359 GRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           G      + +  G+E        +ID+  + G+ + A  +   M
Sbjct: 415 GVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 54/314 (17%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK-NGDVESAREV--------- 428
           N  I  +++    E A  +F+ MS +T V+WN++++G  K  G V+ A E+         
Sbjct: 77  NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDS 136

Query: 429 ----------------------FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                                 F++MP +D  SWNT++ G  Q    ++A +LF VM  E
Sbjct: 137 VSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM-PE 195

Query: 467 RIKVDRVTMVGVASACGYL--GALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           +  V    M+      GY+  G L+ A+ +Y    KN     + + TA++  + + G  +
Sbjct: 196 KNGVSWSAMIS-----GYVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKVE 246

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
            A ++F+RM  +++  W + I         E  +++F  M+   ++P+ +    VL  CS
Sbjct: 247 LAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306

Query: 585 HGGLVNQGWHLFRSMTDIHGVSP---QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           +   +  G    R M  +   SP          ++ +  + G L  A  L   MP +  D
Sbjct: 307 NLSALPLG----RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRK--D 360

Query: 642 VI-WGSLLAACQKH 654
           VI W ++++   +H
Sbjct: 361 VITWNAMISGYAQH 374


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/741 (33%), Positives = 373/741 (50%), Gaps = 87/741 (11%)

Query: 158  VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
             Q+H  +   G  R       LI  Y + G     +RVFD   + +   W  LI      
Sbjct: 365  TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWG 424

Query: 218  DLPKEAVYLFFEMV---------------------------------------------E 232
               +EAV L+ EMV                                              
Sbjct: 425  GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMIS 484

Query: 233  EGIKPNSVTMVCVISACAKLQNLELGD--------RVCAYIDELGMKANA-LMVNALVDM 283
            E ++P+SVTM+ V  AC++L +L LG          V  ++    M      +  AL+++
Sbjct: 485  EAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMEL 544

Query: 284  YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
            Y   G +    ++F   K++ ++  NT++S + R G   EAL +  +M   G  PD  ++
Sbjct: 545  YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 604

Query: 344  LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
             S++SA   +     G   HGY+++ G    D + N +IDMY KCG        F H +N
Sbjct: 605  ASSLSACGTISFSQLGAQIHGYIIKTGNFN-DFVQNALIDMYAKCG--------FVHSAN 655

Query: 404  KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
            K                       +F ++  +  ++WN+M+ G +Q     EA+ LF  M
Sbjct: 656  K-----------------------MFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM 692

Query: 464  LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
                +K+D++T + V  AC +LG L+  KW++  +   G+  D  L TAL DM+++CG+ 
Sbjct: 693  YMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGEL 752

Query: 524  QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
            Q A  VF RM +R + +W+  I    M G     + LFN+ML  GIKP+ I F+ +L+AC
Sbjct: 753  QMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 812

Query: 584  SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
            SH G V +G   F SM++  GV P+  H+ CMVDLL RAG L  A  +I S+P   N  I
Sbjct: 813  SHAGAVEEGKLYFNSMSEF-GVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSI 871

Query: 644  WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
            WG+LL  C+ H+ +DI     + + ++D   +G + LLSNIYA  G W    +VR  MK 
Sbjct: 872  WGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKS 931

Query: 704  QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
            +G+RK+PG S+IE++ K++ F  GD SH +  +I   L      +    Y  +  N ++ 
Sbjct: 932  KGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVG 991

Query: 764  VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
              +  K+  +  HSEKLA+AFG+I+T     +R+ KNLR+C DCHSFAK+ SK+  REII
Sbjct: 992  TSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREII 1051

Query: 824  VRDNNRFHFFRQGSCSCSDFW 844
            +RD NRFH FR GSCSC+D+W
Sbjct: 1052 MRDLNRFHCFRNGSCSCNDYW 1072



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 159/572 (27%), Positives = 270/572 (47%), Gaps = 95/572 (16%)

Query: 29  TPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQK 88
           T   S S+ S K C T   L Q H H+   GL   P   +K++ + AQ+G FES   +++
Sbjct: 345 TLNSSRSLTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFES---SKR 401

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL------------------- 129
            FD + K +      FM+  LI+ Y   G   EA+SLY E+                   
Sbjct: 402 VFDTFPKPDS-----FMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKA 456

Query: 130 -AGFGIL-------------------------PDKFTFPFVLNACTKSSAF--------G 155
            +GFG L                         PD  T   V  AC++  +          
Sbjct: 457 CSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVK 516

Query: 156 EGVQVHGAIVKMGFDRDV-FVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
           EG  VHG +++   D ++ F+   L+  Y + G++ D  +VF+ + E+ ++SW +LI   
Sbjct: 517 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 576

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
            R   P+EA+ LF +M  +G+ P+S ++   +SAC  +   +LG ++  YI + G   N 
Sbjct: 577 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFND 635

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            + NAL+DMY KCG V +A ++F + K+++LV  N+++  + + G + EA+ + D+M ++
Sbjct: 636 FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMN 695

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
             + D++T LS + A + LG L  G+  H  ++  GL     +   + DMY KCG+ +MA
Sbjct: 696 CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMA 755

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
             +FD MS +++VSW+ +IAG   +G + +                              
Sbjct: 756 HGVFDRMSERSIVSWSVMIAGYGMHGQINA------------------------------ 785

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
             + LF  ML   IK + +T + + SAC + GA++  K  +  + + G+         +V
Sbjct: 786 -TISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMV 844

Query: 515 DMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
           D+ +R GD   A Q+   +    + S W A +
Sbjct: 845 DLLSRAGDLNGAYQIITSLPFPANSSIWGALL 876



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 170/317 (53%), Gaps = 6/317 (1%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T+  +N+LI  ++  G   EA+ L+V++   G++PD ++    L+AC   S    G Q+H
Sbjct: 565 TILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIH 624

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
           G I+K G   D FV+N LI+ Y +CG +    ++F+++ E+++V+W S+IC  ++     
Sbjct: 625 GYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSV 683

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ LF +M    +K + +T + VI AC+ L  LE G  V   +   G++ ++ +  AL 
Sbjct: 684 EAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALT 743

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY KCG +  A  +F    +R++V  + +++ Y   G     +++ ++ML  G +P+ +
Sbjct: 744 DMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDI 803

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T +  +SA +  G +  G++    +   G+E        M+D+  + G    A +I   +
Sbjct: 804 TFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSL 863

Query: 402 ---SNKTVVSWNSLIAG 415
              +N ++  W +L+ G
Sbjct: 864 PFPANSSI--WGALLNG 878



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 5/122 (4%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           D  +  ++  ++ +I GY   G     ISL+ ++ G GI P+  TF  +L+AC+ + A  
Sbjct: 760 DRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVE 819

Query: 156 EGVQVHGAIVKMGFD--RDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLIC 212
           EG     ++ + G +   D F   C+++     GD+    ++   +    N   W +L+ 
Sbjct: 820 EGKLYFNSMSEFGVEPKHDHFA--CMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLN 877

Query: 213 AC 214
            C
Sbjct: 878 GC 879


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/623 (38%), Positives = 359/623 (57%), Gaps = 37/623 (5%)

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            E++     P   T   +I +C    +L    RV  ++ E G   +  +   L++MY   
Sbjct: 59  LELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFF 118

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT---ML 344
            ++D A+++F + ++R + + N +       G   E L +   M   G   DR T   +L
Sbjct: 119 DSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVL 178

Query: 345 SAVSASAQLGDLLC-GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            A  AS     LL  GR  H ++LR+G +G+  I  T++DMY K G     C        
Sbjct: 179 KACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFG-----C-------- 225

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
                             V +A  VF++MP ++ +SW+ M+    +     EA+ELFR +
Sbjct: 226 ------------------VSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFREL 267

Query: 464 LSERIKV--DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           + E   +  + VTMV V  AC  L AL+  + I+ YI + G+   + + +ALV M+ARCG
Sbjct: 268 MLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCG 327

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             +   +VF +M+KRDV +W + I +  + G G++A+ +F EM   G++P  I FV VL 
Sbjct: 328 KLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLG 387

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           ACSH GLV++G  LF SM   HG+ P + HY CMVDLLGRA  L EA  +I++M +EP  
Sbjct: 388 ACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGP 447

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
            +WGSLL +C+ H NV++A  A+ R+ +L+P  +G +VLL++IYA AG W  V RV+  +
Sbjct: 448 KVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLL 507

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           + +G++K+PG S IEV  K++ F S DE +P M  + ++L +++  L++ GYVP    VL
Sbjct: 508 EARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVL 567

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            D+   EK+ ++  HSEKLA+AFGLI++SK   IR+ K+LRLC DCHSF K +SK  ++E
Sbjct: 568 YDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKE 627

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           I+VRD NRFH FR G CSC D+W
Sbjct: 628 ILVRDVNRFHHFRDGVCSCGDYW 650



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 209/395 (52%), Gaps = 26/395 (6%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +L + ++ H H+L+ G    P   +K++        F+S+  A+K FD        + T+
Sbjct: 85  SLLDAQRVHRHLLENGFDQDPFLATKLI---NMYSFFDSIDNARKVFD-----KTRNRTI 136

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF----GEGVQ 159
           ++YN+L R  S  G G E +++Y  +   GI  D+FT+ +VL AC  S  F     +G +
Sbjct: 137 YVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGRE 196

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  I++ G+D  V +   L++ Y + G + +   VF++M  +NVVSW+++I   A+   
Sbjct: 197 IHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGK 256

Query: 220 PKEAVYLFFEMVEE--GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
             EA+ LF E++ E   + PNSVTMV V+ ACA L  LE G  +  YI   G+ +   ++
Sbjct: 257 AFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVI 316

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           +ALV MY +CG ++  +++F +   R++V  N+++S+Y   G  ++A+ I +EM  +G  
Sbjct: 317 SALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVE 376

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT------MIDMYMKCGKQ 391
           P  ++ +S + A +  G +  G+M     L N +     IC +      M+D+  +  + 
Sbjct: 377 PSPISFVSVLGACSHAGLVDEGKM-----LFNSMHVAHGICPSVEHYACMVDLLGRANRL 431

Query: 392 EMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESA 425
           E A +I ++M        W SL+     + +VE A
Sbjct: 432 EEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELA 466



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 206/439 (46%), Gaps = 39/439 (8%)

Query: 127 VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC 186
           +EL      P + T+  ++ +CT  ++  +  +VH  +++ GFD+D F+   LIN Y   
Sbjct: 59  LELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFF 118

Query: 187 GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
             I + R+VFD+   R +  + +L  A +     +E + ++  M   GI  +  T   V+
Sbjct: 119 DSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVL 178

Query: 247 SACAK----LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
            AC      +  L  G  + A+I   G      ++  LVDMY K G V  A  +F +   
Sbjct: 179 KACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPV 238

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR--PDRVTMLSAVSASAQLGDLLCGR 360
           +N+V  + +++ Y + G A EAL +  E++L      P+ VTM+S + A A L  L  GR
Sbjct: 239 KNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGR 298

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
           + HGY+LR GL+    + + ++ MY +CGK E+  R+FD M  + VVSWNSLI+    +G
Sbjct: 299 LIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHG 358

Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
             + A  +F EM      ++N                          ++   ++ V V  
Sbjct: 359 FGKKAIGIFEEM------TYNG-------------------------VEPSPISFVSVLG 387

Query: 481 ACGYLGALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDV 538
           AC + G +D  K ++  +   +GI   ++    +VD+  R    + A ++   M  +   
Sbjct: 388 ACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGP 447

Query: 539 SAWTAAIGAMAMEGNGEQA 557
             W + +G+  +  N E A
Sbjct: 448 KVWGSLLGSCRIHCNVELA 466



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 18/222 (8%)

Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
           N ++  L ++    +A+EL    LS      + T   +  +C +  +L  A+ ++ ++ +
Sbjct: 43  NKLIQSLCKQGNLTQALEL----LSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLE 98

Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
           NG   D  LAT L++M++       A +VF +   R +  + A   A+++ G+GE+ + +
Sbjct: 99  NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNM 158

Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHG----GLVNQGW----HLFRSMTDIHGVSPQIVHY 612
           +  M   GI  D   +  VL AC        L+N+G     H+ R     HG    +   
Sbjct: 159 YRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILR-----HGYDGYVHIM 213

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
             +VD+  + G +  A  +   MPV+ N V W +++A   K+
Sbjct: 214 TTLVDMYAKFGCVSNASCVFNQMPVK-NVVSWSAMIACYAKN 254


>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
          Length = 637

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/498 (40%), Positives = 312/498 (62%), Gaps = 1/498 (0%)

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTV 406
           +A+  +     G   H   ++ G  G   + N  I  Y  CG      ++FD +   + V
Sbjct: 140 AAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDV 199

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           V+WN+++AG ++ G V  AREVF  MP RD +SW+T++GG  +E   E A+ +F+ M+++
Sbjct: 200 VTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQ 259

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            +K +   +V   SA   LG L+  K+++  +++ G+   + L  AL+DM+++CG    A
Sbjct: 260 GVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAA 319

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            +VF  M +RDV AW + I  +A  G G  AV+LF + + +G  P SI FVGVL ACS  
Sbjct: 320 KEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRT 379

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           GLV++G   F+ M + + +  ++ HYGCMVDLL RAGL+ EA++LI+ M + P+ V+WG+
Sbjct: 380 GLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGT 439

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           +L+AC++H  VD+      ++ ELDP   G +VLL++IYA A KW  V +VR  M  +G 
Sbjct: 440 ILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGT 499

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            K  G S +E +G VH+F  GD +H +   I +ML  +N RL +AGYVPD+++VL D+ +
Sbjct: 500 SKSAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHDIGD 559

Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
           +EK + +  HSE+LA+A+G I      PIR+VKNL +C DCH F+K+V+KV+ REI+VRD
Sbjct: 560 EEKVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIVVRD 619

Query: 827 NNRFHFFRQGSCSCSDFW 844
            +RFH  + G CSC D+W
Sbjct: 620 GSRFHHMKDGKCSCHDYW 637



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 161/351 (45%), Gaps = 44/351 (12%)

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE------------------ 198
           G  VH   VK G   D++V N  I+FYG CGD+   R+VFDE                  
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYV 210

Query: 199 --------------MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
                         M  R+ VSW+++I    +   P+ A+ +F  MV +G+K N   +V 
Sbjct: 211 RAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVT 270

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
            +SA A+L  LE G  V   +  +GM  +  +  AL+DMY KCG+V  AK++F     R+
Sbjct: 271 ALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRD 330

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR---- 360
           +   N+++      GL  +A+ + ++ +  G  P  +T +  ++A ++ G +  GR    
Sbjct: 331 VFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFK 390

Query: 361 -MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIK 418
            M   Y + + +E +      M+D+  + G  + A  + + M      V W ++++   +
Sbjct: 391 LMAEKYDIESEMEHY----GCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKR 446

Query: 419 NGDVESAREVFSEMPGRD--HISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           +G V+    V +++   D  H  +  +L  +  +    + +   R ++S R
Sbjct: 447 HGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNR 497



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 8/273 (2%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD     +E S     ++++I GY   G    A+ ++  +   G+  ++      L
Sbjct: 218 AREVFDGMPVRDEVS-----WSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTAL 272

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           +A  +     +G  VH  + ++G    V +   LI+ Y +CG +   + VFD M  R+V 
Sbjct: 273 SAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVF 332

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           +W S+IC  A   L  +AV LF + V EG  P S+T V V++AC++   ++ G R    +
Sbjct: 333 AWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLM 392

Query: 266 DE-LGMKANALMVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLARE 323
            E   +++       +VD+  + G V  A +L  G     + VL  TI+S   R GL   
Sbjct: 393 AEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVDL 452

Query: 324 ALAILDEMLLHGPRPD-RVTMLSAVSASAQLGD 355
            + + ++++   P  D    +L+++ A A+  D
Sbjct: 453 GITVGNKLIELDPAHDGYYVLLASIYAKAKKWD 485


>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
 gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/603 (36%), Positives = 349/603 (57%), Gaps = 10/603 (1%)

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           CA+ + L     + A+I +LG+     + N LV++Y KCGA   A Q+F E   R+ +  
Sbjct: 13  CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            ++++   +  L+ + L++   +      RPD     + V A A LG +  GR  H + +
Sbjct: 73  ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            +     + + ++++DMY KCG    A  +FD +  K  +SW ++++G  K+G  E A E
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-DRVTMVGVASACGYLG 486
           +F  +P ++  SW  ++ G  Q     EA  +F  M  ER+ + D + +  +  AC  L 
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
           A    + ++  +   G    + ++ AL+DM+A+C D   A  +F RM  RDV +WT+ I 
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
            MA  G  E+A+ L+++M+  G+KP+ + FVG++ ACSH G V +G  LF+SMT  +G+ 
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK----HQNVDIAAY 662
           P + HY C++DLLGR+GLL EA +LI +MP  P++  W +LL+AC++       + IA +
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432

Query: 663 AAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVH 722
                   DP     ++LLSNIYASA  W  V+  R ++ E  +RK PG SS+EV  +  
Sbjct: 433 LVSSFKLKDP---STYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489

Query: 723 EFTSGDESHPEMNNISSMLREMNCRLR-DAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
            F +G+ SHP   +I  +L+++   +R   GYVPD + +L D+DEQEK+ LL  HSE+ A
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSA 549

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +A+GL+      PIR+VKNLR+C DCH   K +S++ +REIIVRD  R+H F+ G CSC+
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609

Query: 842 DFW 844
           DFW
Sbjct: 610 DFW 612



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 206/458 (44%), Gaps = 70/458 (15%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L  C ++        +H  IVK+G  +   + N L+N YG+CG      +VFDEM  R+ 
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69

Query: 205 VSWTSLICACARRDLP-KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV-C 262
           ++W S++ A  + +L  K            G++P+      ++ ACA L +++ G +V C
Sbjct: 70  IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129

Query: 263 AYIDELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            +I  +   AN  +V ++LVDMY KCG +++AK +F   + +N +    ++S Y + G  
Sbjct: 130 HFI--VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187

Query: 322 REAL---------------AILDEMLLHGP-----------RPDRVTML------SAVSA 349
            EAL               A++   +  G            R +RV +L      S V A
Sbjct: 188 EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGA 247

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            A L   + GR  HG V+  G +    I N +IDMY KC     A  IF  M ++ VVSW
Sbjct: 248 CANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSW 307

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            SLI G+ ++G                                 E+A+ L+  M+S  +K
Sbjct: 308 TSLIVGMAQHGQA-------------------------------EKALALYDDMVSHGVK 336

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQ 528
            + VT VG+  AC ++G ++  + ++  + K+ GI   +Q  T L+D+  R G    A  
Sbjct: 337 PNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAEN 396

Query: 529 VFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           +   M    D   W A + A   +G G+  + + + ++
Sbjct: 397 LIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 160/358 (44%), Gaps = 37/358 (10%)

Query: 30  PKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P D      +K C  L  +   +Q HCH +     +     S +V   A+ G   S   A
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS---A 159

Query: 87  QKAFDYYIKDNETSAT--------------------------LFMYNSLIRGYSCIGLGV 120
           +  FD     N  S T                          L+ + +LI G+   G G+
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219

Query: 121 EAISLYVELAGFGI-LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
           EA S++ E+    + + D      ++ AC   +A   G QVHG ++ +GFD  VF+ N L
Sbjct: 220 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           I+ Y +C D++  + +F  M  R+VVSWTSLI   A+    ++A+ L+ +MV  G+KPN 
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339

Query: 240 VTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           VT V +I AC+ +  +E G  +  +   + G++ +      L+D+  + G +D A+ L  
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399

Query: 299 ECK-DRNLVLCNTIMSNYVRLGLAREALAILDEML--LHGPRPDRVTMLSAVSASAQL 353
                 +      ++S   R G  +  + I D ++       P    +LS + ASA L
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 197/466 (42%), Gaps = 81/466 (17%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           +TL   K  H HI+K G+       + +V    + G   + ++A + FD     +  +  
Sbjct: 17  RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCG---AASHALQVFDEMPHRDHIA-- 71

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVH 161
              + S++   +   L  + +S++  +     L PD F F  ++ AC    +   G QVH
Sbjct: 72  ---WASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
              +   +  D  V++ L++ Y +CG +   + VFD +  +N +SWT+++   A+    +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188

Query: 222 EAVYLF-----------------FEMVEEGIKPNSV---------------TMVCVISAC 249
           EA+ LF                 F    +G++  SV                +  ++ AC
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           A L     G +V   +  LG  +   + NAL+DMY KC  V  AK +F   + R++V   
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHG 364
           +++    + G A +ALA+ D+M+ HG +P+ VT +  + A + +G +  GR     M   
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368

Query: 365 YVLRNGLEGW----------------DSICNTM------------IDMYMKCGKQEMACR 396
           Y +R  L+ +                +++ +TM            +    + G+ +M  R
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428

Query: 397 IFDHMSN-------KTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
           I DH+ +        T +  +++ A     G V  AR    EM  R
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVR 474


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/567 (38%), Positives = 332/567 (58%), Gaps = 31/567 (5%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           N L+  Y+K G ++TA++LF E   RN+   N +++     GL  E+L     M   G +
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           PD   + S     A L D++ GR  H YV+R+GL+    + +++  MYM+CG        
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG-------- 115

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
                              +++G+          +P  + +S NT + G TQ    E A+
Sbjct: 116 ------------------FLRDGEA-----ALRALPSLNIVSCNTTISGRTQNGDAEGAL 152

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
           E F +M    ++ + VT V   ++C  L AL   + I+A   K G+   + + T+LV M+
Sbjct: 153 EFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMY 212

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           +RCG    + +V       D+   +A I A    G+G++AV LF +M+  G +P+ + F+
Sbjct: 213 SRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFL 272

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
            +L ACSH GL ++G + F  MT  +G+ P + HY C+VDLLGR+G L EA DLI SMPV
Sbjct: 273 TLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPV 332

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           +P+ VIW +LL+AC+  +  D+A   AER+ ELDP  S  +VLLSNI A++ +W +V++V
Sbjct: 333 QPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKV 392

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           R  M+EQ +RK PG S +E+ G++H+F +GDESH     I   L EM  R+R  GY PD+
Sbjct: 393 RETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDM 452

Query: 758 TNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKV 817
           + V  D++++EK+  L+HHSEKLA+AF  +S  + +PIRV+KNLR+C DCH   KL+SKV
Sbjct: 453 SMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKV 512

Query: 818 YDREIIVRDNNRFHFFRQGSCSCSDFW 844
             REI+VRD +RFH F+ G CSC D+W
Sbjct: 513 IGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 33/278 (11%)

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
           +SWN LI G +KNGD+E+AR++F EMP R+  +WN M+ GLT   + EE++  F  M  E
Sbjct: 1   MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
            ++ D   +  +   C  L  +   + ++AY+ ++G+  DM + ++L  M+ RCG  +  
Sbjct: 61  GMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDG 120

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
               R +   ++ +    I      G+ E A+E F  M   G++ +++ FV  +T+CS  
Sbjct: 121 EAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDL 180

Query: 587 GLVNQGW--HLFRSMTDIHGVSP---QIVHY----GC---------------------MV 616
             + QG   H     T +  V P    +VH     GC                     M+
Sbjct: 181 AALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMI 240

Query: 617 DLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAAC 651
              G  G   +A+ L K M     EPN+V + +LL AC
Sbjct: 241 SAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYAC 278



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 157/346 (45%), Gaps = 32/346 (9%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N LI  Y + GD+   R++FDEM  RNV +W +++       L +E++  FF M  EG++
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+   +  +   CA L+++  G +V AY+   G+  +  + ++L  MYM+CG +   +  
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
                  N+V CNT +S   + G A  AL     M   G   + VT +SAV++ + L  L
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             G+  H   ++ G++    +  +++ MY +CG     C                     
Sbjct: 184 AQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCG-----CL-------------------- 218

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
              GD E    V  E  G D +  + M+         ++A+ LF+ M++   + + VT +
Sbjct: 219 ---GDSE---RVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFL 272

Query: 477 GVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG 521
            +  AC + G  D     +  + K  G+   ++  T +VD+  R G
Sbjct: 273 TLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSG 318



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 5/272 (1%)

Query: 83  LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
           L  A+K FD     N  +     +N+++ G +  GL  E++  +  +   G+ PD++   
Sbjct: 16  LETARKLFDEMPARNVAT-----WNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLG 70

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +   C        G QVH  +V+ G DRD+ V + L + Y  CG + DG      +   
Sbjct: 71  SLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSL 130

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N+VS  + I    +    + A+  F  M   G++ N+VT V  +++C+ L  L  G ++ 
Sbjct: 131 NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIH 190

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
           A   + G+     ++ +LV MY +CG +  ++++  E    +LVLC+ ++S Y   G  +
Sbjct: 191 ALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQ 250

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           +A+ +  +M+  G  P+ VT L+ + A +  G
Sbjct: 251 KAVGLFKQMMAAGAEPNEVTFLTLLYACSHSG 282



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 98  ETSAT-LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGE 156
           E S T L + +++I  Y   G G +A+ L+ ++   G  P++ TF  +L AC+ S    E
Sbjct: 227 EYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDE 286

Query: 157 GVQVHGAIVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICAC 214
           G+     + K  G    V    C+++  G  G + +   +   M  + + V W +L+ AC
Sbjct: 287 GMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC 346


>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15930
 gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/631 (35%), Positives = 364/631 (57%), Gaps = 8/631 (1%)

Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE--CGDIVDGRR 194
           D   F  +L  C  +  F    Q+H   +  G   +   +  L  F+     G +    +
Sbjct: 33  DYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYK 89

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           +F ++ E +VV W ++I   ++ D   E V L+  M++EG+ P+S T   +++   +   
Sbjct: 90  LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG 149

Query: 255 -LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
            L  G ++  ++ + G+ +N  + NALV MY  CG +D A+ +F      ++   N ++S
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL-LCGRMCHGYVLRNGLE 372
            Y R+    E++ +L EM  +   P  VT+L  +SA +++ D  LC R+ H YV     E
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV-HEYVSECKTE 268

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
               + N +++ Y  CG+ ++A RIF  M  + V+SW S++ G ++ G+++ AR  F +M
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
           P RD ISW  M+ G  +   F E++E+FR M S  +  D  TMV V +AC +LG+L++ +
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
           WI  YI+KN I  D+ +  AL+DM+ +CG  ++A +VF  M++RD   WTA +  +A  G
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
            G++A+++F +M    I+PD I ++GVL+AC+H G+V+Q    F  M   H + P +VHY
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
           GCMVD+LGRAGL+ EA ++++ MP+ PN ++WG+LL A + H +  +A  AA++I EL+P
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEP 568

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           +   V+ LL NIYA   +W ++  VR ++ +  I+K PG S IEVNG  HEF +GD+SH 
Sbjct: 569 DNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHL 628

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
           +   I   L E+      A Y+PD + +L +
Sbjct: 629 QSEEIYMKLEELAQESTFAAYLPDTSELLFE 659



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 167/573 (29%), Positives = 276/573 (48%), Gaps = 75/573 (13%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKV-VCTCAQMGTFESLTYAQKAFDYYI 94
           I  L  CKT ++ KQ H   + +G+   P++  K+ V  C+++G    ++YA K F   +
Sbjct: 38  ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGG--HVSYAYKLF---V 92

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS-SA 153
           K  E    +  +N++I+G+S +    E + LY+ +   G+ PD  TFPF+LN   +   A
Sbjct: 93  KIPEPDVVV--WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGA 150

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G ++H  +VK G   +++V+N L+  Y  CG +   R VFD   + +V SW  +I  
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISG 210

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
             R    +E++ L  EM    + P SVT++ V+SAC+K+++ +L  RV  Y+ E   + +
Sbjct: 211 YNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPS 270

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG---LAR-------- 322
             + NALV+ Y  CG +D A ++F   K R+++   +I+  YV  G   LAR        
Sbjct: 271 LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330

Query: 323 --------------------EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
                               E+L I  EM   G  PD  TM+S ++A A LG L  G   
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
             Y+ +N ++    + N +IDMY KCG  E A ++F  M  +   +W +++ GL  NG  
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           + A +VF +M                 ++M               I+ D +T +GV SAC
Sbjct: 451 QEAIKVFFQM-----------------QDM--------------SIQPDDITYLGVLSAC 479

Query: 483 GYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-A 540
            + G +D A+  +A +  +  I   +     +VDM  R G  + A ++ R+M     S  
Sbjct: 480 NHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIV 539

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           W A +GA  +  N E   EL  + + + ++PD+
Sbjct: 540 WGALLGASRLH-NDEPMAELAAKKILE-LEPDN 570


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/673 (34%), Positives = 359/673 (53%), Gaps = 35/673 (5%)

Query: 174 FVENCLINFYGECGDIVDGRRVFD--EMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
            + +CL   Y   GD+            S  ++ +W +L+ A +R   P EA+ +F   +
Sbjct: 37  ILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVF-RAL 95

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
               +P+S T    +SACA+L +L  G+ V       G   +  + ++++++Y KCGA+D
Sbjct: 96  PPAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMD 155

Query: 292 TAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA 351
            A ++F   + R+ V  +T+++ +V  G   +A+ +   M   G   D V ++  + A A
Sbjct: 156 DAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACA 215

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
             GD   G   HGY+LR+ ++    I  +++DMY K                        
Sbjct: 216 ATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAK------------------------ 251

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
                  NG  + AR VF  MP R+ +SW+ ++  L Q    +EA+ LFR+M    +  +
Sbjct: 252 -------NGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPN 304

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
              +VG   AC  LG L L K I+ +I +  +  D  + TA++DM+++CG    A  +F 
Sbjct: 305 SGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFD 363

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
           ++  RD+ +W   I      G G  A+ LF EM R  ++PD   F  +L+A SH GLV +
Sbjct: 364 KVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEE 423

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
           G   F  M + +G+ P   H  C+VDLL R+GL+ EA  L+ S+  +P   I  +LL+ C
Sbjct: 424 GKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGC 483

Query: 652 QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
             +  +++    AE+I EL P   GV  L+SN+YA+A  W  V  VR  MK+ G +K PG
Sbjct: 484 LNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPG 543

Query: 712 SSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
            SSIE+ G +H F   D+SHP+   I  M+ +++  +R  GY+P    V  D++E  K+ 
Sbjct: 544 CSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQ 603

Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
           LLS HSE+LA AFGL++TS    + V+KNLR+C DCH   K +SK+ DREI+VRD  RFH
Sbjct: 604 LLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFH 663

Query: 832 FFRQGSCSCSDFW 844
            F+ G+CSC D+W
Sbjct: 664 HFKDGACSCGDYW 676



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 190/372 (51%), Gaps = 6/372 (1%)

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
           + +++  +N+L+  +S      EA+ ++  L      PD  TF   L+AC +      G 
Sbjct: 65  SPSSIPAWNALLAAHSRGASPHEALRVFRALPP-AARPDSTTFTLALSACARLGDLATGE 123

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            V       G+  D+FV + ++N Y +CG + D  +VFD M +R+ V+W++++       
Sbjct: 124 VVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAG 183

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
            P +A+ ++  M  +G++ + V +V V+ ACA   +  +G  V  Y+    M+ + ++  
Sbjct: 184 QPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVIST 243

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           +LVDMY K G  D A+++F     RN V  + ++S   + G A EAL +   M + G  P
Sbjct: 244 SLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHP 303

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +   ++ A+ A + LG L  G+  HG++LR  LE    +   +IDMY KCG    A  +F
Sbjct: 304 NSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLF 362

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFE 454
           D + ++ ++SWN +IA    +G    A  +F EM       DH ++ ++L  L+   + E
Sbjct: 363 DKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVE 422

Query: 455 EAMELFRVMLSE 466
           E    F  M++E
Sbjct: 423 EGKFWFNCMVNE 434



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 98/242 (40%), Gaps = 45/242 (18%)

Query: 30  PKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P   P +G+L  C  L  LK     H  IL+  L       + V+   ++ G   SL+ A
Sbjct: 303 PNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCG---SLSSA 358

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           Q  FD  +     S  L  +N +I      G G +A+SL+ E+    + PD  TF  +L+
Sbjct: 359 QMLFDKVV-----SRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLS 413

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVS 206
           A + S    EG                F  NC++N YG             E  E+++V 
Sbjct: 414 ALSHSGLVEEG---------------KFWFNCMVNEYG------------IEPGEKHLVC 446

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
              L+   AR  L +EA  L   +     KP    +V ++S C     LELG+     I 
Sbjct: 447 IVDLL---ARSGLVEEANGLVASLHS---KPTISILVALLSGCLNNNKLELGESTAEKIL 500

Query: 267 EL 268
           EL
Sbjct: 501 EL 502


>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 683

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/595 (36%), Positives = 356/595 (59%), Gaps = 13/595 (2%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG-----RRVFDEMSERNVVSWTSLICA 213
           Q+H  I ++G  +D+   N L+ F   C D  +G      ++F  +    ++ +  +I A
Sbjct: 55  QIHAQIFRVGLHQDIVSLNKLMAF---CTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKA 111

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
            A++   K  + LF ++ E+G+ P++ T   V  A   L  +   +++   + + G++ +
Sbjct: 112 FAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFD 171

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             + N+L+DMY +    D  K LF E  DR+++  N ++S YV+     +A+ +   M  
Sbjct: 172 TYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQE 231

Query: 334 H-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
             G  PD  T++S +SA   L  L  G+  H YV R+ ++    I N ++DMY KCG   
Sbjct: 232 ESGLMPDEATVVSTLSACTALKRLELGKKIHHYV-RDNVKFTPIIGNALLDMYCKCGCLS 290

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +A  +F+ M +K V+ W ++++G    G++E ARE+F   P RD + W  M+ G  Q N 
Sbjct: 291 IARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNR 350

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
           F+EA+ LFR M   ++K D+  +V + + C   GA++  KWI+ +I++N I  D  + TA
Sbjct: 351 FDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTA 410

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L++M+A+CG  ++A+++F  +  +D ++WT+ I  +AM G   +A+ELF++M + G++PD
Sbjct: 411 LIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPD 470

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            I F+GVL+ACSHGGLV +G   F SM   + + P++ HYGC+VDLLGRAGLL EA +LI
Sbjct: 471 DITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELI 530

Query: 633 KSMPVEPNDV---IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAG 689
           K +P E   +   ++GSLL+AC+ + NV++    A+++ + +   S VH LL+NIYA A 
Sbjct: 531 KKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFAD 590

Query: 690 KWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           +W +V +VR +MK+ G++K PG SSIEV+  +HEF SG  SHPEM  I  ML  M
Sbjct: 591 RWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIM 645



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 159/593 (26%), Positives = 265/593 (44%), Gaps = 50/593 (8%)

Query: 18  TTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQM 77
           +T TN     T       I  LK+CK++  LKQ H  I + GL      ++K++  C   
Sbjct: 26  STFTN---PTTGLSQQSCISYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDP 82

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
               +L YA+K F Y          L +YN +I+ ++  G     + L+ +L   G+ PD
Sbjct: 83  FN-GNLNYAEKMFKYI-----RYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPD 136

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
            FT+PFV  A        +  ++ G + K G + D +V N LI+ Y +       + +FD
Sbjct: 137 NFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFD 196

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLE 256
           EM +R+V+SW  +I    +    ++A+ +F  M EE G+ P+  T+V  +SAC  L+ LE
Sbjct: 197 EMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLE 256

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS--- 313
           LG ++  Y+ +  +K   ++ NAL+DMY KCG +  A+ +F E   +N++   T++S   
Sbjct: 257 LGKKIHHYVRD-NVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYA 315

Query: 314 ----------------------------NYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
                                        YV+     EA+A+  EM +   +PD+  ++S
Sbjct: 316 NCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVS 375

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            ++  AQ G +  G+  H ++  N +     +   +I+MY KCG  E A  IF  +  K 
Sbjct: 376 LLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKD 435

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFR 461
             SW S+I GL  NG    A E+FS+M       D I++  +L   +   + EE  + F 
Sbjct: 436 TASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFN 495

Query: 462 VMLSERIKVDRVTMVG-VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD---MF 517
            M  E     +V   G +    G  G L+ A+ +   I        + L  +L+    ++
Sbjct: 496 SMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIY 555

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
                 +R  +   + E  D S  T      A     E   ++  +M   G+K
Sbjct: 556 GNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVK 608


>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
          Length = 664

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/480 (43%), Positives = 305/480 (63%), Gaps = 2/480 (0%)

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           L  G +    + N++I  Y+ CG    A ++FD M  K V+SW S++    +  D+ SA 
Sbjct: 185 LLGGFDKHRFVENSLISAYVACGDVGAARKVFDEMLVKDVISWTSIVVAYSRIRDMGSAE 244

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
           EVF+  P +D ++W  M+ G  Q  M  +A+E F  M    + +D V++ G  SAC  LG
Sbjct: 245 EVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAVAGMPIDEVSLTGAISACAQLG 304

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
           A+  A W+    E+NG+  ++ + + LVDM+A+CG    A +VF  M  ++V  +++ I 
Sbjct: 305 AVKRAAWVQEIAERNGLGRNVVVGSGLVDMYAKCGLIDEARKVFEGMHDKNVYTYSSMIV 364

Query: 547 AMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGV 605
            +A  G     + LFN+M+R+  ++P+ + F+GVLTACSH G+V +G + F  M D +G+
Sbjct: 365 GLASHGRANDVIALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGI 424

Query: 606 SPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAE 665
            P   HY CMVDLL R+GL+ EALDL+KSM VEP+  +WG+LL AC+ H N ++A  AAE
Sbjct: 425 LPSADHYACMVDLLARSGLVTEALDLVKSMTVEPHGGVWGALLGACRIHGNTEVAKIAAE 484

Query: 666 RITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE-VNGKVHEF 724
            +  L+PE  G +VLLSN  ASAG+W  V+++R  M+ +G++K P  S  E  +G VH+F
Sbjct: 485 HLFRLEPEGIGNYVLLSNTLASAGEWDEVSKLRKLMRIRGLKKDPAVSWFEGRDGFVHQF 544

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            +GD +HP M+ I   L E+  +L  AGYVP L++V+ +V E+EK+ LL  HSEKLA++F
Sbjct: 545 FAGDNTHPSMHEIKKRLLELREKLNLAGYVPILSSVVYNVSEEEKERLLMGHSEKLALSF 604

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GL++      IR+VKNLR+C DCH F +LVSKV   EI+VRDN RFH FR G CSC  FW
Sbjct: 605 GLLTLESRSSIRIVKNLRICEDCHLFIRLVSKVEPIEILVRDNMRFHHFRDGECSCGGFW 664



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 141/296 (47%), Gaps = 40/296 (13%)

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-RDL------- 219
           GFD+  FVEN LI+ Y  CGD+   R+VFDEM  ++V+SWTS++ A +R RD+       
Sbjct: 188 GFDKHRFVENSLISAYVACGDVGAARKVFDEMLVKDVISWTSIVVAYSRIRDMGSAEEVF 247

Query: 220 -----------------------PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
                                  P +A+  F +M   G+  + V++   ISACA+L  ++
Sbjct: 248 ALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAVAGMPIDEVSLTGAISACAQLGAVK 307

Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
               V    +  G+  N ++ + LVDMY KCG +D A+++F    D+N+   ++++    
Sbjct: 308 RAAWVQEIAERNGLGRNVVVGSGLVDMYAKCGLIDEARKVFEGMHDKNVYTYSSMIVGLA 367

Query: 317 RLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVL-RNGLEGW 374
             G A + +A+ ++M+      P+ VT +  ++A +  G +  GR     +  R G+   
Sbjct: 368 SHGRANDVIALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPS 427

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS----WNSLIAGLIKNGDVESAR 426
                 M+D+  + G   +     D + + TV      W +L+     +G+ E A+
Sbjct: 428 ADHYACMVDLLARSG---LVTEALDLVKSMTVEPHGGVWGALLGACRIHGNTEVAK 480



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 35/312 (11%)

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
            DE+ +K + +   ++V  Y +   + +A+++F  C  +++V    +++ Y +  +  +A
Sbjct: 216 FDEMLVK-DVISWTSIVVAYSRIRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKA 274

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           L   ++M + G   D V++  A+SA AQLG +           RNGL     + + ++DM
Sbjct: 275 LEAFEQMAVAGMPIDEVSLTGAISACAQLGAVKRAAWVQEIAERNGLGRNVVVGSGLVDM 334

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KCG  + A ++F+ M +K V +++S+I GL  +G       +F++M  R  +  N   
Sbjct: 335 YAKCGLIDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRADVEPN--- 391

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGI 503
                                       VT +GV +AC + G +   ++ +A + ++ GI
Sbjct: 392 ---------------------------HVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGI 424

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFN 562
                    +VD+ AR G    A+ + + M  +     W A +GA  + GN E A     
Sbjct: 425 LPSADHYACMVDLLARSGLVTEALDLVKSMTVEPHGGVWGALLGACRIHGNTEVAKIAAE 484

Query: 563 EMLRQGIKPDSI 574
            + R  ++P+ I
Sbjct: 485 HLFR--LEPEGI 494



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 100/193 (51%), Gaps = 2/193 (1%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +++ GY+   + V+A+  + ++A  G+  D+ +    ++AC +  A      V     
Sbjct: 258 WTAMVTGYAQNAMPVKALEAFEQMAVAGMPIDEVSLTGAISACAQLGAVKRAAWVQEIAE 317

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           + G  R+V V + L++ Y +CG I + R+VF+ M ++NV +++S+I   A      + + 
Sbjct: 318 RNGLGRNVVVGSGLVDMYAKCGLIDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIA 377

Query: 226 LFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDM 283
           LF +MV    ++PN VT + V++AC+    ++ G    A + D  G+  +A     +VD+
Sbjct: 378 LFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYACMVDL 437

Query: 284 YMKCGAVDTAKQL 296
             + G V  A  L
Sbjct: 438 LARSGLVTEALDL 450


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/600 (37%), Positives = 342/600 (57%), Gaps = 31/600 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++  CAK + L  G    A I  +G+K + L  N L++MY KCG+VD A+Q+F E   R+
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           LV  NT++ +  + G   EAL +L +M   G      T+ S + A A    L   ++ H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
           + ++  ++    +   ++D+Y KCG                          L+K+     
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCG--------------------------LMKD----- 218

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           A  VF  MP R  ++W++M  G  Q  M+E+A+ LFR      +K D+  M  V  AC  
Sbjct: 219 AVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAG 278

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           L A+   K + A + K+G   ++ +A++L+DM+A+CG  + + +VFR +EKR+V  W A 
Sbjct: 279 LAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAM 338

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I  ++      + + LF +M + G+ P+ + FV VL+AC H GLV +G   F  MT  H 
Sbjct: 339 ISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHH 398

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           ++P + HY CMVD L RAG + EA DLI  +P   +  +WGSLLA+C+ H N+++A  AA
Sbjct: 399 LAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAA 458

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           +++ +++P  SG ++LLSN+YA+ GKW  VA++R  +KE  ++K  G S IE+  KVH F
Sbjct: 459 KKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLF 518

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
             G+ +HP++  I S L E+   L+  GY  +  + L  V E  K+ LL HHSEKLA   
Sbjct: 519 MVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTM 578

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GL+      PIR++KNLR+C DCHSF KL SK + R++IVRD NRFH F+ G CSC DFW
Sbjct: 579 GLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 195/416 (46%), Gaps = 33/416 (7%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L  C K     +G   H  I+ MG   D+   N LIN Y +CG +   R+VFDEM  R+
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +VSW ++I +  +     EA+ L  +M  EG   +  T+  V+ ACA    L     + A
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           +  +  M  N  +  AL+D+Y KCG +  A  +F    DR++V  +++ + YV+  +  +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           ALA+  +    G + D+  M S + A A L  ++ G+  +  + ++G      + +++ID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG  E + ++F  +  + VV WN++I+GL ++     AR +               
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRH-----ARSL--------------- 349

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NG 502
                      E M LF  M    +  + VT V V SACG++G +   +  +  + K + 
Sbjct: 350 -----------EVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHH 398

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
           +  ++   + +VD  +R G    A  +  ++      S W + + +    GN E A
Sbjct: 399 LAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 189/380 (49%), Gaps = 36/380 (9%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           S+ +A++ FD        S +L  +N++I   +  G   EA+ L +++   G    +FT 
Sbjct: 114 SVDFARQVFD-----EMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTI 168

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             VL AC    A  E   +H   +K   D +VFV   L++ Y +CG + D   VF+ M +
Sbjct: 169 SSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPD 228

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R+VV+W+S+     + ++ ++A+ LF +  E G+K +   M  VI ACA L  +  G ++
Sbjct: 229 RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQM 288

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A + + G  +N  + ++L+DMY KCG ++ + ++F + + RN+VL N ++S   R   +
Sbjct: 289 NALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARS 348

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC--- 378
            E + + ++M   G  P+ VT +S +SA   +G           ++R G + +D +    
Sbjct: 349 LEVMILFEKMQQMGLSPNDVTFVSVLSACGHMG-----------LVRKGQKYFDLMTKEH 397

Query: 379 ---------NTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----S 424
                    + M+D   + G+   A  +   +  N +   W SL+A    +G++E    +
Sbjct: 398 HLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVA 457

Query: 425 AREVFSEMPGRDHISWNTML 444
           A+++F   P   H S N +L
Sbjct: 458 AKKLFDIEP---HNSGNYLL 474



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 34/295 (11%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL----TYAQKA-- 89
           IGSL      NE       + ++G       IS V+C CA             +A KA  
Sbjct: 137 IGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAM 196

Query: 90  ----------FDYYIK-----------DNETSATLFMYNSLIRGYSCIGLGVEAISLYVE 128
                      D Y K           ++    ++  ++S+  GY    +  +A++L+ +
Sbjct: 197 DLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRK 256

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
               G+  D+F    V+ AC   +A  EG Q++  + K GF  ++FV + LI+ Y +CG 
Sbjct: 257 AWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGG 316

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           I +  +VF ++ +RNVV W ++I   +R     E + LF +M + G+ PN VT V V+SA
Sbjct: 317 IEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSA 376

Query: 249 CAKLQNLELGDRVCAYID----ELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
           C  +  +  G +   Y D    E  +  N    + +VD   + G +  A  L  +
Sbjct: 377 CGHMGLVRKGQK---YFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISK 428


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/715 (32%), Positives = 383/715 (53%), Gaps = 40/715 (5%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           +L+ C ++   G    +HG +VK G   D+FV   L+N Y  C    D RR+FD M ++N
Sbjct: 82  LLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKN 141

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VV+WT+LI        P  A+ +F EM+E G  P+  T+  ++SAC+  + ++LG +V  
Sbjct: 142 VVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHG 201

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS------NYVR 317
           Y  + G      M N+L  +Y K G +++  + F    D+N++   T++S      NY+ 
Sbjct: 202 YSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLD 261

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
           LG     L++  +ML  G  P+  T+ S +S      D+  G+    +  + G E    +
Sbjct: 262 LG-----LSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPV 316

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
            N+ + +Y++ G+ + A R+F+ M + ++++WN++I+G  +  D  SA++          
Sbjct: 317 KNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMD--SAKD---------- 364

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                    L   +   +A++LFR ++   +K D  T   + S C  + AL+  + I+A 
Sbjct: 365 --------DLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHAN 416

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
             K G   D+ + +ALV+M+ +CG  + A + F  M  R    WT+ I   +  G  + A
Sbjct: 417 TIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDA 476

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           ++LF +M+  G +P+ I FV +L+ACS+ GLV +    F  M + + + P + HYGCMVD
Sbjct: 477 IQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVD 536

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           +  R G L +A   IK    EPN+ IW SL+A C+ H N+++A YAA+R+ EL P+    
Sbjct: 537 MFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIET 596

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           +VLL N+Y S G+W +VARVR   K + +  L   S I +  KV+ F + D +HP+   +
Sbjct: 597 YVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATEL 656

Query: 738 SSMLREMNCRLRDAGYVP--DLTNVLLDVDEQEKK-------YLLSHHSEKLAMAFGLIS 788
             +L  +  + +  GY P  +   +L D  E +          L+ HHSE+LA+A GL+ 
Sbjct: 657 YQLLENLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLE 716

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           T     +RV KN+ +C DCHS  K  S + +REI+VRD+ R H F+ G CSC DF
Sbjct: 717 TPPGATVRVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 262/582 (45%), Gaps = 68/582 (11%)

Query: 23  QHKAKTTPKDS-PSIGSLKNCKTLNE-LKQPHCH--ILKQGLGHKPSYISKVVCTCAQMG 78
           +H++   P D+  ++G L++ +T+   +  P  H  +   GLG   +    +V T    G
Sbjct: 51  EHESPPRPLDAQEAMGMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKT----G 106

Query: 79  TFESLTYAQKAFDYYIK-----------DNETSATLFMYNSLIRGYSCIGLGVEAISLYV 127
           T   +  A    + Y++           D      +  + +LI G++       A+ ++V
Sbjct: 107 TAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFV 166

Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
           E+   G  P  +T   +L+AC+ +     G QVHG  +K G D    + N L   Y + G
Sbjct: 167 EMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSG 226

Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACAR-RDLPKEAVYLFFEMVEEGIKPNSVTMVCVI 246
           D+  G R F    ++NV++WT++I +CA   +     + LF +M+E G+ PN  T+  V+
Sbjct: 227 DLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVM 286

Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLV 306
           S C    ++ LG +V A+  ++G +AN  + N+ + +Y++ G  D A +LF E    +++
Sbjct: 287 SLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSII 346

Query: 307 LCNTIMSNYVRL-----------GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
             N ++S Y ++               +AL +  +++    +PD  T  S +S  + +  
Sbjct: 347 TWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMA 406

Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
           L  G   H   ++ G      + + +++MY KCG  E A + F  M  +T V+W S+I+G
Sbjct: 407 LEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISG 466

Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
             ++G                                 ++A++LF  M+    + + +T 
Sbjct: 467 YSQHGRS-------------------------------QDAIQLFEDMVLSGARPNEITF 495

Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHCD--MQLATALVDMFARCGDPQRAMQVFRRM 533
           V + SAC Y G ++ A+  Y  + +N  H +  +     +VDMF R G    A    +R 
Sbjct: 496 VSLLSACSYAGLVEEAER-YFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRT 554

Query: 534 E-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
             + + + W++ +      GN E A    + +L   +KP  I
Sbjct: 555 GFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLE--LKPKVI 594



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 20/203 (9%)

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML +   V     V +   C   G L  A+ ++ ++ K G   DM +AT+LV+++ RC  
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            + A ++F  M  ++V  WTA I    +      A+E+F EML  G  P      G+L+A
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC---------MVDLLGRAGLLGEALDLIK 633
           CS    ++ G         +HG S   + YG          +  L  ++G L   L   K
Sbjct: 187 CSAARRIDLGQQ-------VHGYS---IKYGADTITSMGNSLCRLYCKSGDLESGLRAFK 236

Query: 634 SMPVEPNDVIWGSLLAACQKHQN 656
             P + N + W +++++C + +N
Sbjct: 237 GTP-DKNVITWTTMISSCAEDEN 258


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/791 (31%), Positives = 405/791 (51%), Gaps = 42/791 (5%)

Query: 55   ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
            ++K GL    S +S      +  G ++S+  A + F+     N        +NS+I   +
Sbjct: 376  VIKSGL--DTSSVSVANSLISMFGNYDSVEEASRVFN-----NMQERDTISWNSIITASA 428

Query: 115  CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF 174
              G   E++  +  +       D  T   +L AC  +     G  +HG I K G + +V 
Sbjct: 429  HNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVC 488

Query: 175  VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
            V N L++ Y + G   D   VF  M  R+++SW S++ +         A+ L  EM++  
Sbjct: 489  VCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTR 548

Query: 235  IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
               N VT    +SAC  L+ L++   V A++    +  N ++ N LV MY K G +D A+
Sbjct: 549  KAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQ 605

Query: 295  QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            ++     +R++V  N ++  +         +   + M   G   + +T+++ +       
Sbjct: 606  KVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPD 665

Query: 355  DLL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
             LL  G   H +++  G E    + +++I MY +CG                        
Sbjct: 666  YLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCG------------------------ 701

Query: 414  AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
                   D+ ++  +F  +  ++  +WN +          EEA++    M ++ + +D+ 
Sbjct: 702  -------DLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQF 754

Query: 474  TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
            +     +  G L  LD  + ++++I K G   D  +  A +DM+ +CG+     ++    
Sbjct: 755  SFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIP 814

Query: 534  EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
            + R   +W   I A+A  G   QA E F+EML  G+KPD + FV +L+ACSHGGLV++G 
Sbjct: 815  KIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGL 874

Query: 594  HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
              F SMT   GV   I H  C++DLLGR+G L EA   I  MPV PN+ +W SLLAAC+ 
Sbjct: 875  VYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKV 934

Query: 654  HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
            H N+++   AA+R+ EL+      +VL SN+ AS  +W +V  VR QM+ Q ++K P  S
Sbjct: 935  HGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACS 994

Query: 714  SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLL 773
             I++  KV  F  GD+ HP+   I + L E+    R+ G++PD +  L D DE++K++ L
Sbjct: 995  WIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNL 1054

Query: 774  SHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
             +HSE++A+AFGLI++++  P+R+ KNLR+C DCHS  KLVSK+  R+I+VRD+ RFH F
Sbjct: 1055 WNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHF 1114

Query: 834  RQGSCSCSDFW 844
              G CSCSD+W
Sbjct: 1115 HGGKCSCSDYW 1125



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 242/506 (47%), Gaps = 41/506 (8%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F S+ YAQ  FD     N+ S     +N++I G+  +G   +A+  +  +   G+ P  +
Sbjct: 195 FGSIKYAQHVFDKMYDRNDAS-----WNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSY 249

Query: 140 TFPFVLNACTKSSAFGEGV-QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDE 198
               ++ AC +S    EG  Q+HG +VK G   +VFV   L++FYG  G + +  ++F+E
Sbjct: 250 VIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEE 309

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
           + E N+VSWTSL+   A     KE + ++  +   G+     TM  VI  C    +  +G
Sbjct: 310 IEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMG 369

Query: 259 DRVCAYIDELGMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
            ++   + + G+  +++ V N+L+ M+    +V+ A ++F   ++R+ +  N+I++    
Sbjct: 370 YQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAH 429

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
            G   E+L     M    P+ D +T+ + + A      L  GR  HG + ++GLE    +
Sbjct: 430 NGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCV 489

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
           CN+++ MY + G  E A  +F  M  + ++SWNS++A  +++G                 
Sbjct: 490 CNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGK---------------- 533

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
                          +  A+ L   ML  R  ++ VT     SAC  L  L   K ++A+
Sbjct: 534 ---------------YSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAF 575

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
           +    +H ++ +   LV M+ + G    A +V + M +RDV  W A IG  A + +    
Sbjct: 576 VIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNAT 635

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTAC 583
           ++ FN M R+G+  + I  V +L  C
Sbjct: 636 IQAFNLMRREGLLSNYITIVNLLGTC 661



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 167/647 (25%), Positives = 289/647 (44%), Gaps = 81/647 (12%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQM---GTFESLTYAQKAFDYYIKDNETSATLFM 105
           +Q H +++K GL      +S V    + +   GT  S++ A K F+   + N  S T   
Sbjct: 269 RQIHGYVVKCGL------MSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWT--- 319

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
             SL+  Y+  G   E +++Y  L   G++    T   V+  C        G Q+ G ++
Sbjct: 320 --SLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVI 377

Query: 166 KMGFD-RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           K G D   V V N LI+ +G    + +  RVF+ M ER+ +SW S+I A A     +E++
Sbjct: 378 KSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESL 437

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             FF M     K + +T+  ++ AC   Q+L+ G  +   I + G+++N  + N+L+ MY
Sbjct: 438 GHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMY 497

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            + G+ + A+ +F     R+L+  N++M+++V  G    A+ +L EML      + VT  
Sbjct: 498 AQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFT 557

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           +A+SA   L  L   ++ H +V+   +     I NT++ MY K G  + A ++   M  +
Sbjct: 558 TALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPER 614

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            VV+WN+LI G   + D  +  + F+ M                              +L
Sbjct: 615 DVVTWNALIGGHADDKDPNATIQAFNLMRREG--------------------------LL 648

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           S  I +  V ++G   +  YL  L     I+A+I   G   D  + ++L+ M+A+CGD  
Sbjct: 649 SNYITI--VNLLGTCMSPDYL--LKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLN 704

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF------VG 578
            +  +F  +  ++ S W A   A A  G GE+A++    M   G+  D   F      +G
Sbjct: 705 TSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIG 764

Query: 579 VLTACS-----HGGLVNQGWHL----FRSMTDIHGVSPQI---------------VHYGC 614
            LT        H  ++  G+ L      +  D++G   +I                 +  
Sbjct: 765 NLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNI 824

Query: 615 MVDLLGRAGLLGEALDLIKSM---PVEPNDVIWGSLLAACQKHQNVD 658
           ++  L R G   +A +    M    ++P+ V + SLL+AC     VD
Sbjct: 825 LISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVD 871



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 231/514 (44%), Gaps = 40/514 (7%)

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G  +H   VK    ++ F  N L+N Y + G I   + VFD+M +RN  SW ++I    R
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR-VCAYIDELGMKANAL 275
                +A+  F  M E G+ P+S  +  +++AC +   +  G R +  Y+ + G+ +N  
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  +L+  Y   G+V  A +LF E ++ N+V   ++M  Y   G  +E L I   +  +G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQEMA 394
                 TM + +      GD   G    G V+++GL+    S+ N++I M+      E A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            R+F++M  +  +SWNS+I     NG                                FE
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNG-------------------------------RFE 434

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           E++  F  M     K D +T+  +  ACG    L   + ++  I K+G+  ++ +  +L+
Sbjct: 435 ESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLL 494

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            M+A+ G  + A  VF  M  RD+ +W + + +   +G    A+ L  EML+     + +
Sbjct: 495 SMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYV 554

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F   L+AC +     +   +  +      V   ++    +V + G+ GL+ EA  + K 
Sbjct: 555 TFTTALSACYNL----EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKI 610

Query: 635 MPVEPNDVIWGSLLA--ACQKHQNVDIAAYAAER 666
           MP E + V W +L+   A  K  N  I A+   R
Sbjct: 611 MP-ERDVVTWNALIGGHADDKDPNATIQAFNLMR 643



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 182/406 (44%), Gaps = 37/406 (9%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           +L  C  L +LK  H  ++   + H     + +V      G F  +  AQK      + +
Sbjct: 559 ALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLV---TMYGKFGLMDEAQKVCKIMPERD 615

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNAC-TKSSAFGE 156
                +  +N+LI G++        I  +  +   G+L +  T   +L  C +       
Sbjct: 616 -----VVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKH 670

Query: 157 GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
           G+ +H  IV  GF+ D +V++ LI  Y +CGD+     +FD ++ +N  +W ++  A A 
Sbjct: 671 GMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAH 730

Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
               +EA+     M  +G+  +  +    ++    L  L+ G ++ ++I +LG + +  +
Sbjct: 731 YGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYV 790

Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
           +NA +DMY KCG +D   ++    K R+    N ++S   R G  R+A     EML  G 
Sbjct: 791 LNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGL 850

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI------------CNTMIDM 384
           +PD VT +S +SA +           HG ++  GL  + S+            C  +ID+
Sbjct: 851 KPDHVTFVSLLSACS-----------HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDL 899

Query: 385 YMKCGKQEMACRIFDHM---SNKTVVSWNSLIAGLIKNGDVESARE 427
             + G+   A    D M    N+ V  W SL+A    +G++E  R+
Sbjct: 900 LGRSGRLAEAEGFIDKMPVPPNEFV--WRSLLAACKVHGNLELGRK 943



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 1/160 (0%)

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
           ++ K ++A   K+ I  +      LV+M+++ G  + A  VF +M  R+ ++W   I   
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGF 223

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
              G   +A++ F  M   G+ P S V   ++TAC   G + +G           G+   
Sbjct: 224 VRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSN 283

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           +     ++   G  G + EA  L + +  EPN V W SL+
Sbjct: 284 VFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322


>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/601 (36%), Positives = 339/601 (56%), Gaps = 40/601 (6%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+   I+  GF  + ++   L+        +   R++FD++ + N+  W S+    A+ +
Sbjct: 56  QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSE 115

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             +E V+LFF+M    I+PN  T   V+ +C K+  L  G++V  ++ + G + N  +  
Sbjct: 116 SYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGT 175

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            L+DMY   G V  A ++F E  +RN+V   ++++ Y+                      
Sbjct: 176 TLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYI---------------------- 213

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
                LSA        DL+  R          +  W    N M+  Y++ G    A ++F
Sbjct: 214 -----LSA--------DLVSARRLFDLAPERDVVLW----NIMVSGYIEGGDMVEARKLF 256

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             M N+ V+ WN+++ G   NG+VE+   +F EMP R+  SWN ++GG     +F E + 
Sbjct: 257 HEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLG 316

Query: 459 LFRVMLSER-IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            F+ MLSE  +  +  T+V V SAC  LGALDL KW++ Y E +G+  ++ +  AL+DM+
Sbjct: 317 SFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMY 376

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG  + A+ VFR M+ +D+ +W   IG +AM   G  A+ LF +M   G KPD I F+
Sbjct: 377 AKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFI 436

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           G+L AC+H GLV  G+  F+SM D + + PQI HYGCMVD+L RAG L +A+  ++ MPV
Sbjct: 437 GILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPV 496

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           E + VIW  LL AC+ ++NV++A  A +R+ EL+P+    +V+LSNIY  AG+W +VAR+
Sbjct: 497 EADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARL 556

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           ++ M++ G +KLPG S IEVN  V EF S DE HP++  I  +LR +   LR  GYVPDL
Sbjct: 557 KVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVPDL 616

Query: 758 T 758
           T
Sbjct: 617 T 617



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 247/540 (45%), Gaps = 80/540 (14%)

Query: 36  IGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           I  L++CKT  ++ Q    I+  G  +      K+V  CA   T + +TYA++ FD    
Sbjct: 42  ISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICA---TLKRMTYARQLFDQIPD 98

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
            N     + ++NS+ RGY+      E + L+ ++ G  I P+ FTFP VL +C K +A  
Sbjct: 99  PN-----IALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALI 153

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI---- 211
           EG QVH  ++K GF  + FV   LI+ Y   G + D  ++F EM ERNVV+WTS+I    
Sbjct: 154 EGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYI 213

Query: 212 ----CACARR--DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA-- 263
                  ARR  DL  E   + + ++  G                    +E GD V A  
Sbjct: 214 LSADLVSARRLFDLAPERDVVLWNIMVSGY-------------------IEGGDMVEARK 254

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              E+  + + +  N ++  Y   G V+  + LF E  +RN+   N ++  Y   GL  E
Sbjct: 255 LFHEMPNR-DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFE 313

Query: 324 ALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
            L     ML      P+  T+++ +SA A+LG L  G+  H Y   +GL+G   + N ++
Sbjct: 314 VLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALM 373

Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNT 442
           DMY KCG  E A  +F  M  K ++SWN+LI                             
Sbjct: 374 DMYAKCGIIENAISVFRGMDTKDLISWNTLI----------------------------- 404

Query: 443 MLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
             GGL   +   +A+ LF  M +   K D +T +G+  AC ++G ++     +AY +   
Sbjct: 405 --GGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG---FAYFQSMA 459

Query: 503 ----IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
               I   ++    +VDM AR G  ++AM   R+M  + D   W   +GA  +  N E A
Sbjct: 460 DDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELA 519


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/712 (33%), Positives = 393/712 (55%), Gaps = 25/712 (3%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           +   + FP +L  C   +   E   +HG IVK GF  D+FV   L+N Y +CG +    +
Sbjct: 62  IESSYYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHK 120

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFD +  RNV +WT+L+    +   P  A+ LF +M+E G  P++ T+  V++AC+ LQ+
Sbjct: 121 VFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQS 180

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           +E G +V AY+ +  +  +  + N+L   Y K   ++ A + F   K+++++   +++S+
Sbjct: 181 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISS 240

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
               G A  +L+   +ML  G +P+  T+ S +SA   +  L  G   H   ++ G    
Sbjct: 241 CCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS 300

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             I N+++ +Y+KCG    A ++F+ M    +V+WN++IAG  K  D+       +E   
Sbjct: 301 ILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDL-------AEDDV 353

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
             H S +T             A+ +F+ +    +K D  T   V S C  L AL+  + I
Sbjct: 354 AAHKSGST-------------ALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQI 400

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +  I K+G+  D+ + TALV M+ +CG   +A + F  M  R + +WT+ I   A  G  
Sbjct: 401 HGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLS 460

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           +QA++LF +M   GIKP+ + FVGVL+ACSH GL ++  + F  M   + + P + H+ C
Sbjct: 461 QQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFAC 520

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           ++D+  R G + EA D++  M  EPN+ IW  L+A C+ H   D+  YAAE++ +L P+ 
Sbjct: 521 LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKD 580

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
              +V L N++ SAG+W +V++VR  MKE+ + KL   S I +  KV+ F   D+SH + 
Sbjct: 581 VETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQS 640

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH---HSEKLAMAFGLISTSK 791
             +  +L  +   ++  GY P + +V +   E+ ++ +LS    HSEKLA+AFGL++   
Sbjct: 641 LEMYKLLETVLNEVKALGYEP-IEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPT 699

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
             PIRVVK++ +C DCH+F + +S +  REI++RD+ + H F  G CSC  +
Sbjct: 700 ATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 263/549 (47%), Gaps = 55/549 (10%)

Query: 46  NELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
            E +  H HI+K G       ++ +V   ++ G  ES   A K FD   + N  + T   
Sbjct: 81  TEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES---AHKVFDNLPRRNVNAWT--- 134

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
             +L+ GY      + A+ L++++   G  P  +T   VLNAC+   +   G QVH  ++
Sbjct: 135 --TLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLI 192

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K   D D  + N L +FY +   +    + F  + E++V+SWTS+I +C        ++ 
Sbjct: 193 KYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLS 252

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F +M+ +G+KPN  T+  V+SAC  +  L+LG ++ +   +LG  ++ L+ N+++ +Y+
Sbjct: 253 FFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYL 312

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR-LGLARE----------ALAILDEMLLH 334
           KCG +  A++LF   +  NLV  N +++ + + + LA +          ALA+  ++   
Sbjct: 313 KCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRS 372

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G +PD  T  S +S  + L  L  G   HG ++++G+     +   ++ MY KCG  + A
Sbjct: 373 GMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKA 432

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            + F  M ++T++SW S+I G  ++G                               + +
Sbjct: 433 SKAFLEMPSRTMISWTSMITGFARHG-------------------------------LSQ 461

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATAL 513
           +A++LF  M    IK ++VT VGV SAC + G  D A + +  ++K   I   M     L
Sbjct: 462 QALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACL 521

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           +DM+ R G  + A  V  +M  + + + W+  I      G  +       ++L+  +KP 
Sbjct: 522 IDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPK 579

Query: 573 SI-VFVGVL 580
            +  +V +L
Sbjct: 580 DVETYVSLL 588


>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
          Length = 563

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/524 (41%), Positives = 308/524 (58%), Gaps = 25/524 (4%)

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL + D +L  G  PD V    A+   A+  D       H +  + G      +CN +I 
Sbjct: 62  ALRLFDHLLRSGADPDHVAYALALGRCARGRDHRAAAQLHSHAAKRGAASHRRVCNGLIH 121

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
            Y  CG    A ++FD       V+WNSL+ G    GDV + RE F  M  RD +SWNT+
Sbjct: 122 AYAVCGSLLDARKVFDRGHEGDAVAWNSLLRGYAAAGDVNALREFFVGMQARDTVSWNTI 181

Query: 444 LGGLTQENMFEEAMELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG 502
           +    +   +EEA+ +FR ML S     DRVT+                          G
Sbjct: 182 IAWCVENGEYEEAIAVFREMLASMECLPDRVTL----------------------FPGKG 219

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           I  + +L++AL++M+++C   + A+ VF  +  + +V  W A +      G  E+A+ELF
Sbjct: 220 IEVEERLSSALINMYSKCACIEGAVHVFENLGAQMNVDTWNAMLAGFTANGCSEKALELF 279

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
             M   G+ P+ I F  VL ACSHGG V +G   F  MT ++G+ P I HYGCMVDL  R
Sbjct: 280 ARMEITGLVPNKITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCR 339

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AGL  +A  +I+ MP++P+  +W +L+ AC+ H+N ++   A   + E  P     +VLL
Sbjct: 340 AGLFDKAEKMIQMMPMKPDAAVWKALVGACKTHRNFELGRKAGHMLIEAAPNDHAGYVLL 399

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SNIYA  G WT V +VR  M ++G++K+PGSSSIE++G +HEF SGD+SH    +I  ML
Sbjct: 400 SNIYALDGNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVIHEFISGDKSHSSKEDIYEML 459

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKN 800
            EM  +L+ AGYVPD ++VLLD+D+++ K+  L+ HSEKLA+AFGLIST+   PIR+ KN
Sbjct: 460 SEMCQQLKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRIAKN 519

Query: 801 LRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LR+C DCH+  KL+SK+Y R IIVRD NRFH FR+GSCSC DFW
Sbjct: 520 LRVCGDCHNAVKLLSKIYGRCIIVRDANRFHHFREGSCSCGDFW 563



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 150/376 (39%), Gaps = 98/376 (26%)

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
           P+ A+ LF  ++  G  P+ V     +  CA+ ++     ++ ++  + G  ++  + N 
Sbjct: 59  PQLALRLFDHLLRSGADPDHVAYALALGRCARGRDHRAAAQLHSHAAKRGAASHRRVCNG 118

Query: 280 LVDMYMKCGAVDTAKQLFGECKD-------------------------------RNLVLC 308
           L+  Y  CG++  A+++F    +                               R+ V  
Sbjct: 119 LIHAYAVCGSLLDARKVFDRGHEGDAVAWNSLLRGYAAAGDVNALREFFVGMQARDTVSW 178

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
           NTI++  V  G   EA+A+  EML      PDRVT+                        
Sbjct: 179 NTIIAWCVENGEYEEAIAVFREMLASMECLPDRVTLFPG--------------------- 217

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIKNGDVESAR 426
             G+E  + + + +I+MY KC   E A  +F+++  +  V +WN+++AG   NG  E A 
Sbjct: 218 -KGIEVEERLSSALINMYSKCACIEGAVHVFENLGAQMNVDTWNAMLAGFTANGCSEKAL 276

Query: 427 EVFSEM------PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVAS 480
           E+F+ M      P +  I++NT+L   +     EE M  F          +R+T V    
Sbjct: 277 ELFARMEITGLVPNK--ITFNTVLNACSHGGFVEEGMGCF----------ERMTKV---- 320

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVS 539
                                GI  D+     +VD+F R G   +A ++ + M  K D +
Sbjct: 321 --------------------YGIEPDIAHYGCMVDLFCRAGLFDKAEKMIQMMPMKPDAA 360

Query: 540 AWTAAIGAMAMEGNGE 555
            W A +GA     N E
Sbjct: 361 VWKALVGACKTHRNFE 376



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 146/336 (43%), Gaps = 18/336 (5%)

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A+ L+  L   G  PD   +   L  C +        Q+H    K G      V N LI+
Sbjct: 62  ALRLFDHLLRSGADPDHVAYALALGRCARGRDHRAAAQLHSHAAKRGAASHRRVCNGLIH 121

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICA-CARRDLPKEAVYLFFEMVEEGIKPNSV 240
            Y  CG ++D R+VFD   E + V+W SL+    A  D+     +       + +  N++
Sbjct: 122 AYAVCGSLLDARKVFDRGHEGDAVAWNSLLRGYAAAGDVNALREFFVGMQARDTVSWNTI 181

Query: 241 TMVCVISACAK---------LQNLE-LGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
              CV +   +         L ++E L DRV  +  + G++    + +AL++MY KC  +
Sbjct: 182 IAWCVENGEYEEAIAVFREMLASMECLPDRVTLFPGK-GIEVEERLSSALINMYSKCACI 240

Query: 291 DTAKQLFGECKDR-NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           + A  +F     + N+   N +++ +   G + +AL +   M + G  P+++T  + ++A
Sbjct: 241 EGAVHVFENLGAQMNVDTWNAMLAGFTANGCSEKALELFARMEITGLVPNKITFNTVLNA 300

Query: 350 SAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-VV 407
            +  G +  G  C   + +  G+E   +    M+D++ + G  + A ++   M  K    
Sbjct: 301 CSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCRAGLFDKAEKMIQMMPMKPDAA 360

Query: 408 SWNSLIAGLIKNGDVESARE---VFSEMPGRDHISW 440
            W +L+     + + E  R+   +  E    DH  +
Sbjct: 361 VWKALVGACKTHRNFELGRKAGHMLIEAAPNDHAGY 396



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 115/264 (43%), Gaps = 28/264 (10%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSL 109
           Q H H  K+G        + ++   A  G   SL  A+K FD   + +E  A    +NSL
Sbjct: 99  QLHSHAAKRGAASHRRVCNGLIHAYAVCG---SLLDARKVFD---RGHEGDAV--AWNSL 150

Query: 110 IRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK--- 166
           +RGY+  G        +V +       D  ++  ++  C ++  + E + V   ++    
Sbjct: 151 LRGYAAAGDVNALREFFVGMQA----RDTVSWNTIIAWCVENGEYEEAIAVFREMLASME 206

Query: 167 -----------MGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-SERNVVSWTSLICAC 214
                       G + +  + + LIN Y +C  I     VF+ + ++ NV +W +++   
Sbjct: 207 CLPDRVTLFPGKGIEVEERLSSALINMYSKCACIEGAVHVFENLGAQMNVDTWNAMLAGF 266

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKAN 273
                 ++A+ LF  M   G+ PN +T   V++AC+    +E G      + ++ G++ +
Sbjct: 267 TANGCSEKALELFARMEITGLVPNKITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPD 326

Query: 274 ALMVNALVDMYMKCGAVDTAKQLF 297
                 +VD++ + G  D A+++ 
Sbjct: 327 IAHYGCMVDLFCRAGLFDKAEKMI 350



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 5/129 (3%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+++ G++  G   +A+ L+  +   G++P+K TF  VLNAC+      EG+     + 
Sbjct: 259 WNAMLAGFTANGCSEKALELFARMEITGLVPNKITFNTVLNACSHGGFVEEGMGCFERMT 318

Query: 166 KM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICACARR---DLP 220
           K+ G + D+    C+++ +   G      ++   M  + +   W +L+ AC      +L 
Sbjct: 319 KVYGIEPDIAHYGCMVDLFCRAGLFDKAEKMIQMMPMKPDAAVWKALVGACKTHRNFELG 378

Query: 221 KEAVYLFFE 229
           ++A ++  E
Sbjct: 379 RKAGHMLIE 387


>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
 gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
          Length = 640

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/572 (40%), Positives = 336/572 (58%), Gaps = 14/572 (2%)

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL-HGPRPDRVT 342
           Y   G +D A  L     D   V   + +  +   GL   ALA+L EMLL HG  P   T
Sbjct: 72  YAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHT 131

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + +++ A    G L  GR  HGY ++  L G   +   ++ MY + G    A  +FD M 
Sbjct: 132 LSASLPAC---GGLAVGRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQ 188

Query: 403 -NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
            +  VVS  +++    K G ++ AR +F  +P +D I WN M+ G TQ     EA+ LFR
Sbjct: 189 PDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFR 248

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG---IHCDMQLATALVDMFA 518
            ML   ++ D V++V   SA   LG  +  +W+++++  +    +  + ++ TAL+DM+ 
Sbjct: 249 RMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYY 308

Query: 519 RCGDPQRAMQVFRRMEK--RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +CG  + A+ VF  +    RD+ AW A +   AM G+  +A+  F ++  QG+ P  I F
Sbjct: 309 KCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITF 368

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
           +GVL ACSH GLV++G  LFRSM + +G+ P++ HYGCMVDLLGRAG + EA +L++SM 
Sbjct: 369 IGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMT 428

Query: 637 -VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
             +P+ V+W SLLAAC+ H+N+++    A+ +       SG +VLLSN+YA+AG W  V 
Sbjct: 429 RTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVG 488

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           RVR  M+  GI+K PG S++EV  +V EF +GD SHP    I + L E+N   R  G+VP
Sbjct: 489 RVRAMMRASGIQKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLEEVNGMARARGHVP 548

Query: 756 ---DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
               + + L D D   K+  L+ HSEKLA+AFGLIST     I++VKNLR C DCH+  K
Sbjct: 549 RTELVLHDLDDDDTAAKEQALAVHSEKLALAFGLISTPPGTAIKIVKNLRACADCHAVLK 608

Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           LVS+V  R+I+ RD NRFH F  GSC+C D+W
Sbjct: 609 LVSEVTGRKIVFRDRNRFHHFVDGSCTCGDYW 640



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 160/358 (44%), Gaps = 52/358 (14%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVE-LAGFGILPDKFTFPFVLNACTKSSAFGEGVQV 160
           T   Y S I  +S  GL   A++L  E L   G+LP   T    L AC        G  +
Sbjct: 92  TAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPAC---GGLAVGRAL 148

Query: 161 HGAIVKMGFDRDVFVENCLINFY--------------------------------GECGD 188
           HG  VK+    + +V   L+  Y                                 + G 
Sbjct: 149 HGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGL 208

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           + D R +FD +  ++++ W +++    +   P EA+ LF  M+  G++P+ V++V  +SA
Sbjct: 209 LDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSA 268

Query: 249 CAKLQNLELGDRVCAYIDELG---MKANALMVNALVDMYMKCGAVDTAKQLFGE--CKDR 303
            A+L   E G  + +++       ++ NA +  AL+DMY KCG+++ A  +FG+    DR
Sbjct: 269 VAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDR 328

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR--- 360
           ++V  N +++ Y   G +REALA   ++   G  P  +T +  ++A +  G +  GR   
Sbjct: 329 DIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELF 388

Query: 361 --MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT--VVSWNSLIA 414
             M   Y +   +E +      M+D+  + G+ E A  +   M+      V W SL+A
Sbjct: 389 RSMAEEYGIEPKVEHY----GCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLA 442



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 181/455 (39%), Gaps = 81/455 (17%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++H A V+ G D+D  V+  L   Y   G +     +     +   V +TS I A + R 
Sbjct: 48  ELHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRG 107

Query: 219 LPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           L   A+ L  EM +  G+ P + T+   + AC     L +G  +  Y  +L +     + 
Sbjct: 108 LHHAALALLSEMLLSHGLLPTAHTLSASLPACG---GLAVGRALHGYAVKLALSGEPYVA 164

Query: 278 NALVDMYM--------------------------------KCGAVDTAKQLFGECKDRNL 305
            AL+ MY                                 K G +D A+ LF     ++L
Sbjct: 165 TALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDL 224

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
           +  N +M  Y + G   EAL +   ML  G  PD V+++ A+SA AQLG    GR  H +
Sbjct: 225 ICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSF 284

Query: 366 VLRNG---LEGWDSICNTMIDMYMKCGKQEMACRIFDHM--SNKTVVSWNSLIAGLIKNG 420
           V  +    +     +   +IDMY KCG  E A  +F  +   ++ +V+WN+++ G   +G
Sbjct: 285 VTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHG 344

Query: 421 DVESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
               A   F ++  +      I++  +L   +   + +E  ELFR M             
Sbjct: 345 HSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSM------------- 391

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM--E 534
                                 E+ GI   ++    +VD+  R G  + A ++ + M   
Sbjct: 392 ---------------------AEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRT 430

Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
           K D   W + + A  +  N E    + + ++  G+
Sbjct: 431 KPDAVMWASLLAACRLHKNMELGQRIADHLVANGL 465



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 16/250 (6%)

Query: 55  ILKQGLGHKPSYIS-KVVCTC-AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRG 112
           +L  G+   P  +S   + TC A+MG  +    A+  FD        S  L  +N+++ G
Sbjct: 182 VLFDGMQPDPHVVSVTAMLTCYAKMGLLDD---ARSLFD-----GLPSKDLICWNAMMDG 233

Query: 113 YSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR- 171
           Y+  G   EA+ L+  +   G+ PD+ +    L+A  +      G  +H  +      R 
Sbjct: 234 YTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRV 293

Query: 172 --DVFVENCLINFYGECGDIVDGRRVFDEM--SERNVVSWTSLICACARRDLPKEAVYLF 227
             +  V   LI+ Y +CG + D   VF ++   +R++V+W +++   A     +EA+  F
Sbjct: 294 RLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAF 353

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVDMYMK 286
            ++  +G+ P  +T + V++AC+    ++ G  +  +  +E G++        +VD+  +
Sbjct: 354 GQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGR 413

Query: 287 CGAVDTAKQL 296
            G V+ A +L
Sbjct: 414 AGRVEEAFEL 423



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 3/115 (2%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +  +N+++ GY+  G   EA++ + +L   G+ P   TF  VLNAC+ S    EG ++  
Sbjct: 330 IVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFR 389

Query: 163 AIV-KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM--SERNVVSWTSLICAC 214
           ++  + G +  V    C+++  G  G + +   +   M  ++ + V W SL+ AC
Sbjct: 390 SMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAAC 444


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 217/600 (36%), Positives = 338/600 (56%), Gaps = 32/600 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           +I+ACA+ ++L+    + A++       +  + N+L+ +Y KCGAV  A+++F     R+
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +    ++++ Y +  +  EAL +L  ML    +P+  T  S + A+        G   H 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
             ++        + + ++DMY +CG+ +MA  +FD + +K              NG    
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK--------------NG---- 231

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                        +SWN ++ G  ++   E  + +F  M     +    T   V SA   
Sbjct: 232 -------------VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAG 278

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           +GAL+  KW++A++ K+G      +   ++DM+A+ G    A +VF R++K+DV  W + 
Sbjct: 279 IGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSM 338

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           + A A  G G +AV  F EM + G+  + I F+ +LTACSHGGLV +G   F  M + + 
Sbjct: 339 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YN 397

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + P+I HY  +VDLLGRAGLL +AL  I  MP++P   +WG+LL +C+ H+N  I  +AA
Sbjct: 398 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAA 457

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           + + ELDP+ +G  VLL NIYAS G+W   ARVR  MK  G++K P  S +E+   VH F
Sbjct: 458 DHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMF 517

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            + D++HP    I     E++ ++R AGYVP+   VLL VDEQE++  L +HSEK+A+AF
Sbjct: 518 VANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAF 577

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            LI+      IR++KN+R+C DCHS  + +SKV+ REI+VRD NRFH F  GSCSC D+W
Sbjct: 578 ALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 193/413 (46%), Gaps = 32/413 (7%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           ++ AC +  +  +   +H  +    F   VF++N LI+ Y +CG + D RRVFD M  R+
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           + SWTSLI   A+ D+P EA+ L   M+    KPN  T   ++ A     +  +G+++ A
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              +     +  + +AL+DMY +CG +D A  +F + + +N V  N +++ + R G    
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            L +  EM  +G      T  S  SA A +G L  G+  H +++++G      + NT++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY K G    A ++FD +  K VV+WNS                               M
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNS-------------------------------M 338

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           L    Q  +  EA+  F  M    + ++++T + + +AC + G +   K  +  +++  +
Sbjct: 339 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNL 398

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGNGE 555
             ++     +VD+  R G    A+    +M  +  +A W A +G+  M  N +
Sbjct: 399 EPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 451



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 1/309 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + SLI GY+   +  EA+ L   +      P+ FTF  +L A   S++ G G Q+H   V
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  +  DV+V + L++ Y  CG +     VFD++  +N VSW +LI   AR+   +  + 
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F EM   G +    T   V SA A +  LE G  V A++ + G + +A + N ++DMY 
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G++  A+++F     +++V  N++++ + + GL REA+   +EM   G   +++T LS
Sbjct: 313 KSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 372

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG-KQEMACRIFDHMSNK 404
            ++A +  G +  G+     +    LE       T++D+  + G   +    IF      
Sbjct: 373 ILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKP 432

Query: 405 TVVSWNSLI 413
           T   W +L+
Sbjct: 433 TAAVWGALL 441


>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/557 (39%), Positives = 332/557 (59%), Gaps = 30/557 (5%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLARE-ALAILDEMLLHGP-RPDRVTMLSAVSAS 350
           A  +F    +  + L NT++S+   +      A ++   +L H   +P+  T  S   A 
Sbjct: 59  ALSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKAC 118

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACR-IFDHMSNKTVVS 408
                L  GR  H +VL+      D      +++ Y KCGK   ACR +F+ +S   + S
Sbjct: 119 GSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVG-ACRYLFNQISKPDLAS 177

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE-NMFEEAMELFRVMLSER 467
           WNS+++  + N                         G + ++ ++  E + LF  M    
Sbjct: 178 WNSILSAYVHNS------------------------GAICEDVSLSLEVLTLFIEMQKSL 213

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           IK + VT+V + SAC  LGAL    W + Y+ K+ +  +  + TAL+DM+++CG    A 
Sbjct: 214 IKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLAC 273

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           Q+F ++  RD   + A IG  A+ G G QA++LF +M  +G+ PD +  V  + +CSH G
Sbjct: 274 QLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVG 333

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV +G  +F SM +++GV P++ HYGC+VDLLGRAG L EA + + +MP++PN VIW SL
Sbjct: 334 LVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSL 393

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L A + H N++I     + + +L+PE SG +VLLSN+YAS  +W +V RVR  MK+ GI 
Sbjct: 394 LGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGIN 453

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K+PGSS +EV G +HEF  GD++HP    I   L EM+ RL + G+ P    VL D++E+
Sbjct: 454 KVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEE 513

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK+  LS+HSE+LA+AF LI++    PIR++KNLR+C DCH+ +KL+SK+Y+REIIVRD 
Sbjct: 514 EKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDR 573

Query: 828 NRFHFFRQGSCSCSDFW 844
           NRFH F++G+CSCSD+W
Sbjct: 574 NRFHHFKEGACSCSDYW 590



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 204/418 (48%), Gaps = 30/418 (7%)

Query: 32  DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
           + P++  L+ CKTL+ LKQ H H++  GL      +S+++   + +      T+A   F+
Sbjct: 9   NHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTI----VFTHALSIFN 64

Query: 92  YYIKDNETSATLFMYNSLIRGYSCIGLGVE-AISLYVELAGFGIL-PDKFTFPFVLNACT 149
           +       + T+F+YN+LI   + I      A SLY  +     L P+ FTFP +  AC 
Sbjct: 65  HI-----PNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACG 119

Query: 150 KSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
                  G  +H  ++K +    D FV+  L+N+Y +CG +   R +F+++S+ ++ SW 
Sbjct: 120 SQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWN 179

Query: 209 SLICA--------CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           S++ A        C    L  E + LF EM +  IK N VT+V +ISACA+L  L  G  
Sbjct: 180 SILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAW 239

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
              Y+ +  +K N  +  AL+DMY KCG +D A QLF +   R+ +  N ++  +   G 
Sbjct: 240 AHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGY 299

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWD 375
             +AL +  +M L G  PD VT++  + + + +G +  G      M   Y +   LE + 
Sbjct: 300 GHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHY- 358

Query: 376 SICNTMIDMYMKCGK-QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
                ++D+  + G+ +E   R+ +       V W SL+     +G++E    V   +
Sbjct: 359 ---GCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHL 413


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 265/861 (30%), Positives = 430/861 (49%), Gaps = 80/861 (9%)

Query: 49   KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
            ++ H H+L+ G G +   ++ +V   A+ G    +  A+K FD     +  S     +N+
Sbjct: 217  REVHAHVLRFGFGDEVDVLNALVTMYAKCG---DIVAARKVFDGMAMTDCIS-----WNA 268

Query: 109  LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
            +I G+         + L++ +    + P+  T   V  A    S  G   ++HG  VK G
Sbjct: 269  MIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRG 328

Query: 169  FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
            F  DV   N LI  Y   G + D  ++F  M  ++ +SWT++I    +   P +A+ ++ 
Sbjct: 329  FAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYA 388

Query: 229  EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
             M    + P+ VT+   ++ACA L  L++G ++       G     ++ NAL++MY K  
Sbjct: 389  LMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSK 448

Query: 289  AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
             +D A ++F    ++++V  +++++ +     + +AL     ML H  +P+ VT ++A+S
Sbjct: 449  HIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALS 507

Query: 349  ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
            A A  G L  G+  H YVLR G+     + N ++D+Y+KCG+   A   F   S K VVS
Sbjct: 508  ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVS 567

Query: 409  WNSLIAGLIKNGDVESAREVFSEM-------------------PGRDHISW--------- 440
            WN +++G + +G  + A  +F++M                    GR  +           
Sbjct: 568  WNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLGRLDVGIKLHELAQNK 627

Query: 441  ---------NTMLGGLTQENMFEEAMELFRVMLSE------------------------- 466
                     N +L    +    ++A+E+F+ M  +                         
Sbjct: 628  GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYF 687

Query: 467  -----RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
                  +K + VT +   SAC   GAL   K I+AY+ + GI  +  +  AL+D++ +CG
Sbjct: 688  RYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 747

Query: 522  DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
                A   F    ++DV +W   +      G G+ A+ LFN+M+  G  PD + FV ++ 
Sbjct: 748  QTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMC 806

Query: 582  ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
            ACS  G+V QGW LF   T+   + P + HY CMVDLL R G L EA +LI  MP++P+ 
Sbjct: 807  ACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDA 866

Query: 642  VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
             +WG+LL  C+ H++V++   AA+ I EL+P     HVLL ++Y  AGKW  VARVR  M
Sbjct: 867  AVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTM 926

Query: 702  KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
            +E+G+ +  G S +EV G  H F + DESHP++  I+ +L  +  R++  G+ P  +   
Sbjct: 927  REKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVES--- 983

Query: 762  LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            L+  E  +  +L  HSE+LA+AFGLI+T+    I V KN   C  CH   K +S++  RE
Sbjct: 984  LEDKEVSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRRE 1043

Query: 822  IIVRDNNRFHFFRQGSCSCSD 842
            I VRD  + H F+ G CSC D
Sbjct: 1044 ITVRDTKQLHCFKDGDCSCGD 1064



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 268/571 (46%), Gaps = 37/571 (6%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F +N ++ GY  +G   EA+ LY  +   G+ PD +TFP VL  C     +  G +VH 
Sbjct: 162 VFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHA 221

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            +++ GF  +V V N L+  Y +CGDIV  R+VFD M+  + +SW ++I         + 
Sbjct: 222 HVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEA 281

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
            + LF  M+E  ++PN +T+  V  A   L  +     +  +  + G   +    N+L+ 
Sbjct: 282 GLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQ 341

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY   G +  A ++F   + ++ +    ++S Y + G   +AL +   M LH   PD VT
Sbjct: 342 MYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVT 401

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           + SA++A A LG L  G   H      G   +  + N +++MY K    + A  +F  M+
Sbjct: 402 IASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA 461

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K VVSW+S+IAG   N                 H S+              +A+  FR 
Sbjct: 462 EKDVVSWSSMIAGFCFN-----------------HRSF--------------DALYYFRY 490

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           ML   +K + VT +   SAC   GAL   K I+AY+ + GI  +  +  AL+D++ +CG 
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
              A   F    ++DV +W   +      G G+ A+ LFN+M+   +    +     L A
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAA 607

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV 642
           C+  G ++ G  L   +    G    +V    ++++  ++  + +A+++ K M  E + V
Sbjct: 608 CACLGRLDVGIKL-HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFM-AEKDVV 665

Query: 643 IWGSLLAA-CQKHQNVDIAAYAAERITELDP 672
            W S++A  C  H++ D   Y    +  + P
Sbjct: 666 SWSSMIAGFCFNHRSFDALYYFRYMLGHVKP 696



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 227/490 (46%), Gaps = 46/490 (9%)

Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
           N +++     G+I    RVF +M ER+V SW  ++    +    +EA+ L++ M+  G++
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+  T  CV+  C  + +  +G  V A++   G      ++NALV MY KCG +  A+++
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F      + +  N +++ +         L +   ML +  +P+ +T+ S   AS  L ++
Sbjct: 255 FDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
              +  HG+ ++ G     + CN++I MY   G+   A +IF  M  K  +SW ++I+G 
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            KNG            P                    ++A+E++ +M    +  D VT+ 
Sbjct: 375 EKNG-----------FP--------------------DKALEVYALMELHNVNPDDVTIA 403

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
              +AC  LG LD+   ++   +  G    + +A AL++M+A+     +A++VF+ M ++
Sbjct: 404 SALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK 463

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           DV +W++ I           A+  F  ML   +KP+S+ F+  L+AC+  G +       
Sbjct: 464 DVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGAL------- 515

Query: 597 RSMTDIH------GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           RS  +IH      G+  +      ++DL  + G    A     S+  E + V W  +L+ 
Sbjct: 516 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSG 574

Query: 651 CQKHQNVDIA 660
              H   DIA
Sbjct: 575 FVAHGLGDIA 584



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 194/437 (44%), Gaps = 34/437 (7%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P+    V +   C   + ++ G R CA  D         + NA++ M ++ G +  A ++
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
           F +  +R++   N ++  Y ++G   EAL +   ML  G RPD  T    +     + D 
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213

Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
             GR  H +VLR G      + N ++ MY KCG    A ++FD M+    +SWN++IAG 
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGH 273

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
            +N + E+                                +ELF  ML   ++ + +T+ 
Sbjct: 274 FENHECEA-------------------------------GLELFLTMLENEVQPNLMTIT 302

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V  A G L  +  AK ++ +  K G   D+    +L+ M+   G    A ++F RME +
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D  +WTA I      G  ++A+E++  M    + PD +     L AC+  G ++ G  L 
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKL- 421

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA-CQKHQ 655
             +    G    +V    ++++  ++  + +A+++ K M  E + V W S++A  C  H+
Sbjct: 422 HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFM-AEKDVVSWSSMIAGFCFNHR 480

Query: 656 NVDIAAYAAERITELDP 672
           + D   Y    +  + P
Sbjct: 481 SFDALYYFRYMLGHVKP 497



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 181/399 (45%), Gaps = 33/399 (8%)

Query: 30  PKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESL 83
           P     I +L  C     L   K+ H ++L+ G+G   + P+ +  +   C Q       
Sbjct: 497 PNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT------ 550

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
           +YA   F  + + +  S     +N ++ G+   GLG  A+SL+ ++    +   +     
Sbjct: 551 SYAWAQFSVHSEKDVVS-----WNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACS 603

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
            L AC        G+++H      GF R V V N L+  Y +   I     VF  M+E++
Sbjct: 604 ALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKD 663

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           VVSW+S+I          +A+Y F  M+   +KPNSVT +  +SACA    L  G  + A
Sbjct: 664 VVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHA 722

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
           Y+   G+ +   + NAL+D+Y+KCG    A   F    ++++V  N ++S +V  GL   
Sbjct: 723 YVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDI 782

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY-VLRNGLEGWDSICNT-- 380
           AL++ ++M+  G  PD VT +   + S        G +  G+ +     E +  + N   
Sbjct: 783 ALSLFNQMVEMGEHPDEVTFVLMCACSR------AGMVIQGWELFHRRTEKFSIVPNLKH 836

Query: 381 ---MIDMYMKCGKQEMACRIFDHMSNKT-VVSWNSLIAG 415
              M+D+  + GK   A  + + M  K     W +L+ G
Sbjct: 837 YACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 875


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/614 (36%), Positives = 344/614 (56%), Gaps = 37/614 (6%)

Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           P   T   +I +CA+  +L  G  V   +   G   +  +   L++MY + G++D A+++
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT----MLSAVSASAQ 352
           F E ++R + + N +      +G  +E L +  +M   G   DR T    + + V +   
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           +  L  G+  H ++LR+G E    +  T++D+Y K G                       
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFG----------------------- 232

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-- 470
                    V  A  VF  MP ++ +SW+ M+    +  M  +A+ELF++M+ E      
Sbjct: 233 --------SVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVP 284

Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
           + VTMV V  AC  L AL+  K I+ YI + G+   + +  AL+ M+ RCG+     +VF
Sbjct: 285 NSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVF 344

Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
             M+ RDV +W + I    M G G++A+++F  M+ QG  P  I F+ VL ACSH GLV 
Sbjct: 345 DNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVE 404

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G  LF SM   + + P + HY CMVDLLGRA  L EA+ LI+ M  EP   +WGSLL +
Sbjct: 405 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGS 464

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H NV++A  A+  + EL+P  +G +VLL++IYA A  W+    V   ++ +G++KLP
Sbjct: 465 CRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLP 524

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
           G S IEV  KV+ F S DE +P++  I ++L +++  ++  GYVP    VL D+DE+EK+
Sbjct: 525 GCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKE 584

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
            ++  HSEKLA+AFGLI+T K   IR+ KNLRLC DCH+  K +SK  +REI+VRD NRF
Sbjct: 585 RIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRF 644

Query: 831 HFFRQGSCSCSDFW 844
           H F+ G CSC D+W
Sbjct: 645 HHFKDGVCSCGDYW 658



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/341 (33%), Positives = 183/341 (53%), Gaps = 10/341 (2%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P + TF  ++ +C + ++  +G+ VH  +V  GFD+D F+   LIN Y E G I   R+V
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA----K 251
           FDE  ER +  W +L  A A     KE + L+ +M   GI  +  T   V+ AC      
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +  L+ G  + A+I   G +AN  ++  L+D+Y K G+V  A  +F     +N V  + +
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 312 MSNYVRLGLAREALAILDEMLL--HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++ + +  +  +AL +   M+L  H   P+ VTM++ + A A L  L  G++ HGY+LR 
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR 315

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL+    + N +I MY +CG+  M  R+FD+M N+ VVSWNSLI+    +G  + A ++F
Sbjct: 316 GLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 430 SEM----PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
             M        +IS+ T+LG  +   + EE   LF  MLS+
Sbjct: 376 ENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSK 416



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 215/427 (50%), Gaps = 27/427 (6%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H  ++  G    P   +K++    ++G   S+  A+K FD          T++++N+L R
Sbjct: 101 HRRLVSSGFDQDPFLATKLINMYYELG---SIDRARKVFD-----ETRERTIYVWNALFR 152

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS----SAFGEGVQVHGAIVKM 167
             + +G G E + LYV++   GI  D+FT+ FVL AC  S    S   +G ++H  I++ 
Sbjct: 153 ALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRH 212

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
           G++ ++ V   L++ Y + G +     VF  M  +N VSW+++I   A+ ++P +A+ LF
Sbjct: 213 GYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELF 272

Query: 228 FEMVEEGIK--PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
             M+ E     PNSVTMV V+ ACA L  LE G  +  YI   G+ +   ++NAL+ MY 
Sbjct: 273 QLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYG 332

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           +CG +   +++F   K+R++V  N+++S Y   G  ++A+ I + M+  G  P  ++ ++
Sbjct: 333 RCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFIT 392

Query: 346 AVSASAQL-----GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
            + A +       G +L   M   Y +  G+E +      M+D+  +  + + A ++ + 
Sbjct: 393 VLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYA----CMVDLLGRANRLDEAIKLIED 448

Query: 401 MS-NKTVVSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           M        W SL+     + +V   E A  +  E+  R+  ++  +     +  M+ EA
Sbjct: 449 MHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEA 508

Query: 457 MELFRVM 463
             + +++
Sbjct: 509 KSVMKLL 515



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 15/243 (6%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L + K+ H HIL+ G       ++ ++   A+ G   S++YA   F      N  S    
Sbjct: 199 LQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFG---SVSYANSVFCAMPTKNFVS---- 251

Query: 105 MYNSLIRGYSCIGLGVEAISLY--VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            ++++I  ++   + ++A+ L+  + L     +P+  T   VL AC   +A  +G  +HG
Sbjct: 252 -WSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHG 310

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            I++ G D  + V N LI  YG CG+I+ G+RVFD M  R+VVSW SLI         K+
Sbjct: 311 YILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKK 370

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG-----DRVCAYIDELGMKANALMV 277
           A+ +F  M+ +G  P+ ++ + V+ AC+    +E G       +  Y    GM+  A MV
Sbjct: 371 AIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 430

Query: 278 NAL 280
           + L
Sbjct: 431 DLL 433



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 138/328 (42%), Gaps = 45/328 (13%)

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           P P + T    + + AQ   L  G   H  ++ +G +    +   +I+MY + G  + A 
Sbjct: 74  PNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRAR 133

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
           ++FD    +T+  WN+L   L                          M+G        +E
Sbjct: 134 KVFDETRERTIYVWNALFRAL-------------------------AMVG------CGKE 162

Query: 456 AMELFRVMLSERIKVDRVTMVGVASACGY----LGALDLAKWIYAYIEKNGIHCDMQLAT 511
            ++L+  M    I  DR T   V  AC      +  L   K I+A+I ++G   ++ + T
Sbjct: 163 LLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMT 222

Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK- 570
            L+D++A+ G    A  VF  M  ++  +W+A I   A      +A+ELF  M+ +    
Sbjct: 223 TLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDS 282

Query: 571 -PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG--LLGE 627
            P+S+  V VL AC+    + QG  L        G+   +     ++ + GR G  L+G+
Sbjct: 283 VPNSVTMVNVLQACAGLAALEQG-KLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQ 341

Query: 628 -ALDLIKSMPVEPNDVIWGSLLAACQKH 654
              D +K+  V    V W SL++    H
Sbjct: 342 RVFDNMKNRDV----VSWNSLISIYGMH 365


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/693 (33%), Positives = 386/693 (55%), Gaps = 9/693 (1%)

Query: 160  VHGAIVKM--GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
            +H  ++K+   ++ D   +N LI+ Y   GD      VF     RN + W S +      
Sbjct: 442  MHAQMIKLPQKWNPDAAAKN-LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSS 500

Query: 218  DLPKEAVY-LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
                  V  +F E+  +G+  +S      +  C ++ ++ LG  +   + + G   +  +
Sbjct: 501  AGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYL 560

Query: 277  VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
              AL++ Y +C  ++ A Q+F E  +   +L N  +   ++    ++ + +  +M     
Sbjct: 561  RCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFL 620

Query: 337  RPDRVTMLSAVSAS-AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
            + +  T++  + AS ++LG L  G+  HGYVLRNG +    +  ++IDMY+K      A 
Sbjct: 621  KAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQ 680

Query: 396  RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLTQEN 451
             +FD+M N+ + +WNSL++G    G  E A  + ++M       D ++WN M+ G     
Sbjct: 681  AVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 740

Query: 452  MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
              +EA+  F  M  E +  +  ++  +  AC  L  L   K I+    +NG   D+ +AT
Sbjct: 741  CGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVAT 800

Query: 512  ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
            AL+DM+++    + A +VFRR++ + +++W   I   A+ G G++A+ +FNEM + G+ P
Sbjct: 801  ALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGP 860

Query: 572  DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
            D+I F  +L+AC + GL+ +GW  F SM   + + P++ HY CMVDLLGRAG L EA DL
Sbjct: 861  DAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDL 920

Query: 632  IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
            I +MP++P+  IWG+LL +C+ H+N+  A  AA+ + +L+P  S  ++L+ N+Y+   +W
Sbjct: 921  IHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRW 980

Query: 692  TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
             ++  +R  M   G+R     S I++N +VH F+S ++ HP+   I   L ++   ++  
Sbjct: 981  EDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL 1040

Query: 752  GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
            GYVPD+  V  ++DE EK+ +L  H+EKLA+ +GLI      PIRV+KN R+C DCHS A
Sbjct: 1041 GYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAA 1100

Query: 812  KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +S V  RE+ +RD  RFH FR+G CSC+DFW
Sbjct: 1101 KYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 200/447 (44%), Gaps = 56/447 (12%)

Query: 100 SATLFMYNSLIRGYSCIGLGVE-----------AISLYVELAGFGILPDKFTFPFVLNAC 148
           SA +  Y  L R Y      VE            + ++ EL G G++ D   +   L  C
Sbjct: 474 SAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTC 533

Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
           T+      G+++HG ++K GFD DV++   L+NFYG C  +    +VF EM     + W 
Sbjct: 534 TRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWN 593

Query: 209 SLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-AKLQNLELGDRVCAYIDE 267
             I    + +  ++ V LF +M    +K  + T+V V+ A  ++L  L +G     Y+  
Sbjct: 594 EAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLR 653

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
            G   +  +  +L+DMY+K  ++ +A+ +F   K+RN+   N+++S Y   G+  +AL +
Sbjct: 654 NGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRL 713

Query: 328 LDEMLLHGPRPDRVT---MLSA--------------------------------VSASAQ 352
           L++M   G +PD VT   M+S                                 + A A 
Sbjct: 714 LNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACAS 773

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           L  L  G+  H   +RNG      +   +IDMY K    + A ++F  + NKT+ SWN +
Sbjct: 774 LSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCM 833

Query: 413 IAGLIKNGDVESAREVFSEMP----GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
           I G    G  + A  VF+EM     G D I++  +L       +  E  + F  M+++  
Sbjct: 834 IMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYR 893

Query: 469 KVDRVT----MVGVASACGYLG-ALDL 490
            V R+     MV +    GYL  A DL
Sbjct: 894 IVPRLEHYCCMVDLLGRAGYLDEAWDL 920



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 43/248 (17%)

Query: 37  GSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKD 96
            S+     LN  K+ H ++L+ G        + ++    +     SLT AQ  FD     
Sbjct: 633 ASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKN---HSLTSAQAVFD----- 684

Query: 97  NETSATLFMYNSLIRGYSCIGL-----------------------------------GVE 121
           N  +  +F +NSL+ GYS  G+                                   G E
Sbjct: 685 NMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKE 744

Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
           A++ + ++   G++P+  +   +L AC   S   +G ++H   ++ GF  DVFV   LI+
Sbjct: 745 ALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALID 804

Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVT 241
            Y +   + +  +VF  +  + + SW  +I   A   L KEA+ +F EM + G+ P+++T
Sbjct: 805 MYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAIT 864

Query: 242 MVCVISAC 249
              ++SAC
Sbjct: 865 FTALLSAC 872



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 25/187 (13%)

Query: 39  LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFE---SLTYAQKAFDY 92
           L+ C +L+ L   K+ HC  ++ G      +I  V    A +  +    SL  A K F  
Sbjct: 768 LRACASLSLLQKGKEIHCLSIRNG------FIEDVFVATALIDMYSKSSSLKNAHKVFRR 821

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
                  + TL  +N +I G++  GLG EAIS++ E+   G+ PD  TF  +L+AC  S 
Sbjct: 822 I-----QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 876

Query: 153 AFGEGVQVHGAIVKMGFDRDVF--VEN--CLINFYGECGDIVDGRRVFDEMSER-NVVSW 207
             GEG +   +++    D  +   +E+  C+++  G  G + +   +   M  + +   W
Sbjct: 877 LIGEGWKYFDSMIT---DYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIW 933

Query: 208 TSLICAC 214
            +L+ +C
Sbjct: 934 GALLGSC 940


>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
 gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
          Length = 650

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/526 (38%), Positives = 325/526 (61%), Gaps = 2/526 (0%)

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           +P+ +T   ++ ACA+LQ    G  V  ++ +LG  A+  +VNA V  +   G++  A++
Sbjct: 118 RPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARR 177

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP--RPDRVTMLSAVSASAQL 353
           LF E   R++V  NT++  YVR GL REAL +   ++  G   RPD VTM+ AVS  AQ+
Sbjct: 178 LFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQM 237

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
           GDL  G+  H +V   G+     + N ++DMY+KCG  E+A  +F+ + NKTVVSW ++I
Sbjct: 238 GDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMI 297

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            G  + G +E AR +F EMP RD   WN ++ G  Q    +EA+ LF  M   ++  + +
Sbjct: 298 VGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEI 357

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           TMV + SAC  LGAL++  W++ YI+++ ++  + L T+LVDM+A+CG+ ++A+ +F+ +
Sbjct: 358 TMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEI 417

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
             ++   WTA I  +A  G+ ++A+E F  M+  G++PD I F+GVL+AC H GLV +G 
Sbjct: 418 PDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGR 477

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
             F  M + + +  ++ HY CM+DLLGRAG L EA  L+ +MP++P+ V+WG+L  AC+ 
Sbjct: 478 QFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRM 537

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H N+ +   AA ++ ELDP  SG++VLL+N+YA A       +VR+ M+  G+ K+PG S
Sbjct: 538 HGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCS 597

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
            IE+NG VHEF   D+SH +   I   L  +  +++    + D++ 
Sbjct: 598 CIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMKHTANLIDISE 643



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 232/460 (50%), Gaps = 69/460 (15%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           PD  TFPF+L AC +      G  V G + K+GF  DVFV N  ++F+   G +V  RR+
Sbjct: 119 PDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRL 178

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAKLQ 253
           FDE   R+VVSW +LI    R  LP+EA+ LF+ +VE+G  ++P+ VTM+  +S CA++ 
Sbjct: 179 FDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMG 238

Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ------------------ 295
           +LELG R+  ++D  G++    ++NA++DMY+KCG+++ AK                   
Sbjct: 239 DLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIV 298

Query: 296 -------------LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
                        LF E  +R++   N +M+ YV+    +EA+A+  EM      P+ +T
Sbjct: 299 GHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEIT 358

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
           M++ +SA +QLG L  G   H Y+ R+ L    ++  +++DMY KCG  + A  IF  + 
Sbjct: 359 MVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIP 418

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           +K  ++W ++I GL  +G                                 +EA+E F+ 
Sbjct: 419 DKNALTWTAMICGLANHGHA-------------------------------DEAIEYFQR 447

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCG 521
           M+   ++ D +T +GV SAC + G +   +  ++ + EK  +   M+  + ++D+  R G
Sbjct: 448 MIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAG 507

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQA 557
               A Q+   M    D   W A   A  M GN   GE+A
Sbjct: 508 HLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKA 547



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 204/467 (43%), Gaps = 62/467 (13%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA--GFGILPDKF 139
           S+  A++ FD        +  +  +N+LI GY   GL  EA+ L+  L   G  + PD+ 
Sbjct: 171 SMVLARRLFD-----ESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEV 225

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV--------- 190
           T    ++ C +      G ++H  +   G    V + N +++ Y +CG +          
Sbjct: 226 TMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERI 285

Query: 191 ----------------------DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
                                 D R +FDEM ER+V  W +L+    +    KEA+ LF 
Sbjct: 286 DNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFH 345

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           EM E  + PN +TMV ++SAC++L  LE+G  V  YID   +  +  +  +LVDMY KCG
Sbjct: 346 EMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCG 405

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +  A  +F E  D+N +    ++      G A EA+     M+  G +PD +T +  +S
Sbjct: 406 NIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLS 465

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           A    G +  GR     M   Y L   ++ +    + MID+  + G  + A ++ + M  
Sbjct: 466 ACCHAGLVKEGRQFFSLMHEKYHLERKMKHY----SCMIDLLGRAGHLDEAEQLVNTMPM 521

Query: 403 NKTVVSWNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
           +   V W +L      +G++   E A     E+   D   +  +     + NM ++A + 
Sbjct: 522 DPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKA-DK 580

Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
            RVM+           +GV    G    ++L   ++ +I K+  H D
Sbjct: 581 VRVMMRH---------LGVEKVPG-CSCIELNGVVHEFIVKDKSHLD 617



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 8/182 (4%)

Query: 457 MELFRVML-SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
           + L+R +L S   + D +T   +  AC  L        +  +++K G   D+ +  A V 
Sbjct: 105 LPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVH 164

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG--IKPDS 573
            ++  G    A ++F     RDV +W   IG     G   +A+ELF  ++  G  ++PD 
Sbjct: 165 FWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDE 224

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           +  +G ++ C+  G +  G  L     D  GV   +     ++D+  + G    +L+L K
Sbjct: 225 VTMIGAVSGCAQMGDLELGKRL-HEFVDSKGVRCTVRLMNAVMDMYVKCG----SLELAK 279

Query: 634 SM 635
           S+
Sbjct: 280 SV 281


>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
          Length = 686

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/601 (36%), Positives = 338/601 (56%), Gaps = 40/601 (6%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           Q+   I+  GF  + ++   L+        +   R++FD++ + N+  W S+    A+ +
Sbjct: 119 QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSE 178

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             +E V+LFF+M    I+PN  T   V+ +C K+  L  G++V  ++ + G + N  +  
Sbjct: 179 SYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGT 238

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            L+DMY   G V  A ++F E  +RN+V   ++++ Y+                      
Sbjct: 239 TLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYI---------------------- 276

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
                LSA        DL+  R          +  W    N M+  Y++ G    A ++F
Sbjct: 277 -----LSA--------DLVSARRLFDLAPERDVVLW----NIMVSGYIEGGDMVEARKLF 319

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
             M N+ V+ WN+++ G   NG+VE+   +F EMP R+  SWN ++GG     +F E + 
Sbjct: 320 XEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLG 379

Query: 459 LFRVMLSER-IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            F+ MLSE  +  +  T+V V SAC  LGALDL KW++ Y E +G+  ++ +  AL+DM+
Sbjct: 380 SFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMY 439

Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
           A+CG  + A+ VFR M+ +D+ +W   IG +AM   G  A+ LF +M   G KPD I F+
Sbjct: 440 AKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFI 499

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           G+L AC+H GLV  G+  F+SM D + + PQI HYGCMVD+L RAG L +A   ++ MPV
Sbjct: 500 GILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPV 559

Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
           E + VIW  LL AC+ ++NV++A  A +R+ EL+P+    +V+LSNIY  AG+W +VAR+
Sbjct: 560 EADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARL 619

Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
           ++ M++ G +KLPG S IEVN  V EF S DE HP++  I  +LR +   LR  GYVPDL
Sbjct: 620 KVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVPDL 679

Query: 758 T 758
           T
Sbjct: 680 T 680



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 158/537 (29%), Positives = 244/537 (45%), Gaps = 78/537 (14%)

Query: 38  SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
           ++++CKT  ++ Q    I+  G  +      K+V  CA   T + +TYA++ FD     N
Sbjct: 107 NMRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICA---TLKRMTYARQLFDQIPDPN 163

Query: 98  ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
                + ++NS+ RGY+      E + L+ ++ G  I P+ FTFP VL +C K +A  EG
Sbjct: 164 -----IALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEG 218

Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI------ 211
            QVH  ++K GF  + FV   LI+ Y   G + D  ++F EM ERNVV+WTS+I      
Sbjct: 219 EQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILS 278

Query: 212 --CACARR--DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
                ARR  DL  E   + + ++  G                    +E GD V A    
Sbjct: 279 ADLVSARRLFDLAPERDVVLWNIMVSGY-------------------IEGGDMVEARKLF 319

Query: 268 LGMKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
             M    +M  N ++  Y   G V+  + LF E  +RN+   N ++  Y   GL  E L 
Sbjct: 320 XEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLG 379

Query: 327 ILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
               ML      P+  T+++ +SA A+LG L  G+  H Y   +GL+G   + N ++DMY
Sbjct: 380 SFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMY 439

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            KCG  E A  +F  M  K ++SWN+LI                               G
Sbjct: 440 AKCGIIENAISVFRGMDTKDLISWNTLI-------------------------------G 468

Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNG--- 502
           GL   +   +A+ LF  M +   K D +T +G+  AC ++G ++     +AY +      
Sbjct: 469 GLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG---FAYFQSMADDY 525

Query: 503 -IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
            I   ++    +VDM AR G  ++A    R+M  + D   W   +GA  +  N E A
Sbjct: 526 LIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELA 582


>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/406 (49%), Positives = 281/406 (69%)

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SW +M+ G  Q    +EA+ LF  M    +K + VT+V V +AC  LGALDL   I+ Y 
Sbjct: 194 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 253

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
            ++G   +++++  L+DM+ +CG  + A +VF  ME+R V +W+A IG +AM G  E+A+
Sbjct: 254 NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEAL 313

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
            LF++M + GI+P+ + F+G+L ACSH GL+++G   F SMT  +G+ PQI HYGCMVDL
Sbjct: 314 RLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDL 373

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
           L RAGLL EA + I +MP++PN V+WG+LL AC+ H+NV++A  A + + ELDP   G +
Sbjct: 374 LSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYY 433

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           V+LSNIYA AG+W + ARVR  MK++ ++K PG SSI V+G VHEF +G+ESHP+   I 
Sbjct: 434 VVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIF 493

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
               E+   +R  GYVP+ + VLLD++E EK   +S HSEKLA+ FGL++T    PIR++
Sbjct: 494 QRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIM 553

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCHS  KL+S + +REI+VRD NRFH F   SCSC D+W
Sbjct: 554 KNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 190/434 (43%), Gaps = 47/434 (10%)

Query: 1   MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
           M   L+  P+    P        H  K    ++  I  L+N  +  EL+Q H  I+K   
Sbjct: 34  MLFALSSFPI----PQSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNA 89

Query: 61  GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
                 +++V   CA   +F    YAQ+ F    K    +   F++NS ++  +     +
Sbjct: 90  PLSILPLTRVGLVCAFTPSFH---YAQQIFKCVEKQKPET---FVWNSCLKALAEGDSPI 143

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
           +AI L+  L  + + PD FT   VL AC        G  +HG + K+GF           
Sbjct: 144 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR---------- 193

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
                                    SWTS+I    +    KEA++LF +M E G+K N V
Sbjct: 194 -------------------------SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEV 228

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T+V V++ACA L  L+LG R+  Y +  G K N  + N L+DMY+KCG ++ A ++F E 
Sbjct: 229 TVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEM 288

Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
           ++R +V  + ++      G A EAL +  +M   G  P+ VT +  + A + +G +  GR
Sbjct: 289 EERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGR 348

Query: 361 MCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIK 418
                + R+ G+         M+D+  + G    A     +M  K   V W +L+     
Sbjct: 349 RFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRV 408

Query: 419 NGDVESAREVFSEM 432
           + +VE A E    +
Sbjct: 409 HKNVEMAEEAIKHL 422



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 159/361 (44%), Gaps = 68/361 (18%)

Query: 207 WTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
           W S + A A  D P +A+ LF+ + +  + P++ T   V+ AC  L +L  G  +   ++
Sbjct: 129 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 188

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           ++G ++   M+                                   + YV+ G A+EA+ 
Sbjct: 189 KVGFRSWTSMI-----------------------------------AGYVQCGKAKEAIH 213

Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
           +  +M   G + + VT+++ ++A A LG L  G   H Y  R+G +    I NT+IDMY+
Sbjct: 214 LFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYV 273

Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
           KCG     C                          +E A +VF EM  R  +SW+ M+GG
Sbjct: 274 KCG-----C--------------------------LEEACKVFEEMEERTVVSWSAMIGG 302

Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHC 505
           L      EEA+ LF  M    I+ + VT +G+  AC ++G +   +  +A + ++ GI  
Sbjct: 303 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 362

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            ++    +VD+ +R G    A +    M  K +   W A +GA  +  N E A E    +
Sbjct: 363 QIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL 422

Query: 565 L 565
           L
Sbjct: 423 L 423



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 39/255 (15%)

Query: 425 AREVFS--EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
           A+++F   E    +   WN+ L  L + +   +A+ LF  +    +  D  T   V  AC
Sbjct: 112 AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 171

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             L  L   + ++  +EK G                           FR        +WT
Sbjct: 172 LNLLDLSNGRILHGVVEKVG---------------------------FR--------SWT 196

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + I      G  ++A+ LF +M   G+K + +  V VL AC+  G ++ G  +    ++ 
Sbjct: 197 SMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRI-HEYSNR 255

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAY 662
           HG    +     ++D+  + G L EA  + + M  E   V W +++     H   + A  
Sbjct: 256 HGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMHGRAEEALR 314

Query: 663 AAERITELDPEKSGV 677
               ++++  E +GV
Sbjct: 315 LFSDMSQVGIEPNGV 329


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/712 (33%), Positives = 393/712 (55%), Gaps = 25/712 (3%)

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
           +   + FP +L  C   +   E   +HG IVK GF  D+FV   L+N Y +CG +    +
Sbjct: 56  IESSYYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHK 114

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VFD +  RNV +WT+L+    +   P  A+ LF +M+E G  P++ T+  V++AC+ LQ+
Sbjct: 115 VFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQS 174

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           +E G +V AY+ +  +  +  + N+L   Y K   ++ A + F   K+++++   +++S+
Sbjct: 175 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISS 234

Query: 315 YVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGW 374
               G A  +L+   +ML  G +P+  T+ S +SA   +  L  G   H   ++ G    
Sbjct: 235 CCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS 294

Query: 375 DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
             I N+++ +Y+KCG    A ++F+ M    +V+WN++IAG  K  D+       +E   
Sbjct: 295 ILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDL-------AEDDV 347

Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI 494
             H S +T             A+ +F+ +    +K D  T   V S C  L AL+  + I
Sbjct: 348 AAHKSGST-------------ALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQI 394

Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNG 554
           +  I K+G+  D+ + TALV M+ +CG   +A + F  M  R + +WT+ I   A  G  
Sbjct: 395 HGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLS 454

Query: 555 EQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC 614
           +QA++LF +M   GIKP+ + FVGVL+ACSH GL ++  + F  M   + + P + H+ C
Sbjct: 455 QQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFAC 514

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK 674
           ++D+  R G + EA D++  M  EPN+ IW  L+A C+ H   D+  YAAE++ +L P+ 
Sbjct: 515 LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKD 574

Query: 675 SGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEM 734
              +V L N++ SAG+W +V++VR  MKE+ + KL   S I +  KV+ F   D+SH + 
Sbjct: 575 VETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQS 634

Query: 735 NNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH---HSEKLAMAFGLISTSK 791
             +  +L  +   ++  GY P + +V +   E+ ++ +LS    HSEKLA+AFGL++   
Sbjct: 635 LEMYKLLETVLNEVKALGYEP-IEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPT 693

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
             PIRVVK++ +C DCH+F + +S +  REI++RD+ + H F  G CSC  +
Sbjct: 694 ATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 259/542 (47%), Gaps = 54/542 (9%)

Query: 46  NELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
            E +  H HI+K G       ++ +V   ++ G  ES   A K FD   + N  + T   
Sbjct: 75  TEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES---AHKVFDNLPRRNVNAWT--- 128

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
             +L+ GY      + A+ L++++   G  P  +T   VLNAC+   +   G QVH  ++
Sbjct: 129 --TLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLI 186

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K   D D  + N L +FY +   +    + F  + E++V+SWTS+I +C        ++ 
Sbjct: 187 KYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLS 246

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F +M+ +G+KPN  T+  V+SAC  +  L+LG ++ +   +LG  ++ L+ N+++ +Y+
Sbjct: 247 FFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYL 306

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR-LGLARE----------ALAILDEMLLH 334
           KCG +  A++LF   +  NLV  N +++ + + + LA +          ALA+  ++   
Sbjct: 307 KCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRS 366

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G +PD  T  S +S  + L  L  G   HG ++++G+     +   ++ MY KCG  + A
Sbjct: 367 GMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKA 426

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
            + F  M ++T++SW S+I G  ++G                               + +
Sbjct: 427 SKAFLEMPSRTMISWTSMITGFARHG-------------------------------LSQ 455

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATAL 513
           +A++LF  M    IK ++VT VGV SAC + G  D A + +  ++K   I   M     L
Sbjct: 456 QALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACL 515

Query: 514 VDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           +DM+ R G  + A  V  +M  + + + W+  I      G  +       ++L+  +KP 
Sbjct: 516 IDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPK 573

Query: 573 SI 574
            +
Sbjct: 574 DV 575


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/603 (38%), Positives = 352/603 (58%), Gaps = 16/603 (2%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKA-NALMVNAL-VDMYMKCGAVDTAKQLFGECKD 302
           +I+ C +  +++   RV       GM+A N +  N+L + +      +  A QLF E  +
Sbjct: 67  IIARCVRSGDIDGALRVFH-----GMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
            +    N ++S YVR     +A +  D M    P  D  +  + ++  A+ G++   R  
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGYARRGEMEKAREL 177

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
              ++      W    N MI  Y++CG  E A   F     + VV+W ++I G +K   V
Sbjct: 178 FYSMMEKNEVSW----NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKV 233

Query: 423 ESAREVFSEMP-GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
           E A  +F +M   ++ ++WN M+ G  + +  E+ ++LFR ML E I+ +   +      
Sbjct: 234 ELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293

Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
           C  L AL L + I+  + K+ +  D+   T+L+ M+ +CG+   A ++F  M+K+DV AW
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353

Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            A I   A  GN ++A+ LF EM+   I+PD I FV VL AC+H GLVN G   F SM  
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            + V PQ  HY CMVDLLGRAG L EAL LI+SMP  P+  ++G+LL AC+ H+NV++A 
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAE 473

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
           +AAE++ +L+ + +  +V L+NIYAS  +W +VARVR +MKE  + K+PG S IE+  KV
Sbjct: 474 FAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKV 533

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           H F S D  HPE+++I   L+E+  +++ AGY P+L   L +V+E++K+ LL  HSEKLA
Sbjct: 534 HHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLA 593

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
           +AFG I   +   I+V KNLR+C DCH   K +S++  REIIVRD  RFH F+ GSCSC 
Sbjct: 594 VAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCG 653

Query: 842 DFW 844
           D+W
Sbjct: 654 DYW 656



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 180/399 (45%), Gaps = 43/399 (10%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           D F  N +++ Y    +    +  FD M  ++  SW ++I   ARR   ++A  LF+ M+
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           E+    N V+   +IS   +  +LE            G+ A   M+      YMK   V+
Sbjct: 183 EK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG----YMKAKKVE 234

Query: 292 TAKQLFGECK-DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
            A+ +F +   ++NLV  N ++S YV      + L +   ML  G RP+   + SA+   
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           ++L  L  GR  H  V ++ L    +   ++I MY KCG+   A ++F+ M  K VV+WN
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++I+G  ++G+                                ++A+ LFR M+  +I+ 
Sbjct: 355 AMISGYAQHGNA-------------------------------DKALCLFREMIDNKIRP 383

Query: 471 DRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           D +T V V  AC + G +++   +  + +    +       T +VD+  R G  + A+++
Sbjct: 384 DWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL 443

Query: 530 FRRMEKRDVSA-WTAAIGAMAMEGNGEQAVELFNEMLRQ 567
            R M  R  +A +   +GA  +  N E A E   E L Q
Sbjct: 444 IRSMPFRPHAAVFGTLLGACRVHKNVELA-EFAAEKLLQ 481



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 118/233 (50%), Gaps = 2/233 (0%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARRDLPKEAVYLFFE 229
           R V     +I  Y +   +     +F +M+  +N+V+W ++I        P++ + LF  
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRA 274

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M+EEGI+PNS  +   +  C++L  L+LG ++   + +  +  +   + +L+ MY KCG 
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +  A +LF   K +++V  N ++S Y + G A +AL +  EM+ +  RPD +T ++ + A
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394

Query: 350 SAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
               G +  G      ++R+  +E        M+D+  + GK E A ++   M
Sbjct: 395 CNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 132/315 (41%), Gaps = 43/315 (13%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL---------------------- 416
           N +I   ++ G  + A R+F  M  K  ++WNSL+ G+                      
Sbjct: 65  NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124

Query: 417 ----------IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                     ++N + E A+  F  MP +D  SWNTM+ G  +    E+A ELF  M+ E
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM-E 183

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRA 526
           + +V    M+     C   G L+ A   +      G+       TA++  + +    + A
Sbjct: 184 KNEVSWNAMISGYIEC---GDLEKASHFFKVAPVRGVVA----WTAMITGYMKAKKVELA 236

Query: 527 MQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
             +F+ M   +++  W A I         E  ++LF  ML +GI+P+S      L  CS 
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
              +  G  + + ++    +   +     ++ +  + G LG+A  L + M  + + V W 
Sbjct: 297 LSALQLGRQIHQIVSK-STLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWN 354

Query: 646 SLLAACQKHQNVDIA 660
           ++++   +H N D A
Sbjct: 355 AMISGYAQHGNADKA 369



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 7/207 (3%)

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
            KD   +  L  +N++I GY       + + L+  +   GI P+       L  C++ SA
Sbjct: 240 FKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSA 299

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G Q+H  + K     DV     LI+ Y +CG++ D  ++F+ M +++VV+W ++I  
Sbjct: 300 LQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISG 359

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----G 269
            A+     +A+ LF EM++  I+P+ +T V V+ AC     + +G    AY + +     
Sbjct: 360 YAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG---MAYFESMVRDYK 416

Query: 270 MKANALMVNALVDMYMKCGAVDTAKQL 296
           ++        +VD+  + G ++ A +L
Sbjct: 417 VEPQPDHYTCMVDLLGRAGKLEEALKL 443


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 275/855 (32%), Positives = 439/855 (51%), Gaps = 65/855 (7%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPS--YISK 69
           L++ T+ +   Q      P    S  +L++ ++   +   H   L++GL H+PS    + 
Sbjct: 43  LSSITMASPQQQLDHSALPPAIKSAAALRDARSARAI---HAAALRRGLLHRPSPAVANA 99

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++   A+ G   +      A + +   ++++     +NSLI    C+    +     +  
Sbjct: 100 LLTAYARCGRLAA------ALEVFGSISDSAHDAVSFNSLISAL-CLFRRWDHALAALRA 152

Query: 130 AGFGILP-DKFTFPFVLNACTK----SSAFGEGVQVHGAIVKMGF--DRDVFVENCLINF 182
              G  P   FT   VL A +     ++A   G + H   +K G       F  N L++ 
Sbjct: 153 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 212

Query: 183 YGECGDIVDGRRVFDEMS--ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           Y   G + D +R+F   +    +VV+W +++    +  +  EAV   ++MV  G++P+ V
Sbjct: 213 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 272

Query: 241 TMVCVISACAKLQNLELGDRVCAYI---DELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           T    + AC++L+ L++G  + AY+   DEL   AN+ + +ALVDMY     V  A+Q+F
Sbjct: 273 TFASALPACSRLELLDVGREMHAYVIKDDELA--ANSFVASALVDMYATHEQVGKARQVF 330

Query: 298 GECKD--RNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLG 354
               D  + L + N ++  Y + G+  EAL +   M    G  P   TM S + A A+  
Sbjct: 331 DMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSE 390

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
                   HGYV++ G+ G   + N ++DMY + GK ++A RIF                
Sbjct: 391 AFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIF---------------- 434

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM--LSER-IKVD 471
                           ++P  D +SWNT++ G   +    +A +L R M  L E  +  +
Sbjct: 435 -------------AMVDLP--DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 479

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
            +T++ +   C  L A    K I+ Y  ++ +  D+ + +ALVDM+A+CG    +  VF 
Sbjct: 480 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 539

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVN 590
           R+ +R+   W   I A  M G G +A  LF+ M   G  +P+ + F+  L ACSH G+V+
Sbjct: 540 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 599

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV-IWGSLLA 649
           +G  LF +M   HGV P      C+VD+LGRAG L EA  ++ SM      V  W ++L 
Sbjct: 600 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 659

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC+ H+NV +   A ER+ EL+PE++  +VLL NIY++AG+WT  A VR +M+ +G+ K 
Sbjct: 660 ACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKE 719

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S IEV+G +H F +G+ +HP    + + +  +   +   GY PD + VL D+D+ +K
Sbjct: 720 PGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDK 779

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
             +L  HSEKLA+AFGL+  +    IRV KNLR+C DCH  AK +SK+  REI++RD  R
Sbjct: 780 AAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRR 839

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR G CSC D+W
Sbjct: 840 FHHFRNGQCSCGDYW 854


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/641 (35%), Positives = 350/641 (54%), Gaps = 33/641 (5%)

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           + +W +L+ A +R   P  A+ +F   +    +P+S T    ++ACA+L +L+  + V  
Sbjct: 77  IPAWNALLAARSRAGSPGAALRVF-RALPSSARPDSTTFTLALTACARLGDLDAAEAVRV 135

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
                G   +  + +AL+ +Y +CGA+  A ++F     ++ V  +T+++ +V  G   E
Sbjct: 136 RAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVE 195

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +   M  HG   D V M+  + A    G+   G   HG  LR+G+     I  +++D
Sbjct: 196 ALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVD 255

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY K                               NG  + AR+VF  MP R+ +SWN +
Sbjct: 256 MYAK-------------------------------NGHFDVARQVFRMMPYRNAVSWNAL 284

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           + G  Q    +EA++LFR M +  ++ D   +V    AC  +G L L K I+ +I +  +
Sbjct: 285 ISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR-L 343

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
                L TA++DM+++CG  + A ++F ++  RD+  W A I      G G  A+ LF E
Sbjct: 344 EFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQE 403

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           +   GIKPD   F  +L+A SH GLV +G   F  M    G+ P   H  C+VDLL R+G
Sbjct: 404 LNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSG 463

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
           L+ EA +++ SM  EP   IW +LL+ C  ++ +++    A++I E  PE  GV  L+SN
Sbjct: 464 LVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSN 523

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           +YA+A KW  V  +R  MK+ G +K+PG S IEV+G  H F   D+SHP+   I  M+ +
Sbjct: 524 LYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISK 583

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRL 803
           ++  +R  GYVP    V  D+DE  K+ LLS+HSE+LA+AFGL++TS    + ++KNLR+
Sbjct: 584 LSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRV 643

Query: 804 CCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           C DCH   K +SK+ DREI+VRD  RFH F+ G+CSC D+W
Sbjct: 644 CGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +N+L+   S  G    A+ ++  L      PD  TF   L AC +         V     
Sbjct: 80  WNALLAARSRAGSPGAALRVFRALPS-SARPDSTTFTLALTACARLGDLDAAEAVRVRAF 138

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
             G+ RDVFV + L++ Y  CG + D  RVFD M  ++ V+W++++        P EA+ 
Sbjct: 139 AAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALG 198

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           ++  M E G+  + V MV VI AC    N  +G  V       GM+ + ++  +LVDMY 
Sbjct: 199 MYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYA 258

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G  D A+Q+F     RN V  N ++S + + G A EAL +  EM   G +PD   ++S
Sbjct: 259 KNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVS 318

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
           A+ A A +G L  G+  HG++LR  LE    +   ++DMY KCG  E A ++F+ +S++ 
Sbjct: 319 ALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 377

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMP----GRDHISWNTMLGGLTQENMFEEAMELFR 461
           +V WN++IA    +G    A  +F E+       DH ++ ++L  L+   + EE    F 
Sbjct: 378 LVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 437

Query: 462 VMLSE 466
            M++E
Sbjct: 438 RMITE 442



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SL  A+K F+       +S  L ++N++I      G G +A++L+ EL   GI PD  TF
Sbjct: 362 SLESARKLFNKL-----SSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATF 416

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
             +L+A + S    EG        K  FDR       +I  +G             E +E
Sbjct: 417 ASLLSALSHSGLVEEG--------KFWFDR-------MITEFG------------IEPTE 449

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           ++ V    L+   AR  L +EA  +   M  E   P     V ++S C   + LELG+ +
Sbjct: 450 KHCVCVVDLL---ARSGLVEEANEMLASMHTE---PTIPIWVALLSGCLNNKKLELGETI 503

Query: 262 CAYIDELGMKANALMVNALV-DMYMKCGAVDTAKQLFGECKD 302
              I  L  +   + V ALV ++Y      D  +++    KD
Sbjct: 504 AKKI--LESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKD 543


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/630 (36%), Positives = 350/630 (55%), Gaps = 41/630 (6%)

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           K+A+YL    +     P   T   +I + A+  +L     V   + + G   +  +   L
Sbjct: 55  KQALYL----LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKL 110

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           ++M+ +   VD A+++F + + R + + N +       G   + L +   M + G   DR
Sbjct: 111 INMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDR 170

Query: 341 VT---MLSAVSASAQLGDLLC-GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
            T   +L A  AS  L   L  G+  H ++LR+G      +  T++DMY + G     C 
Sbjct: 171 FTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFG-----C- 224

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
                                    V  A  VF EMP ++ +SW+ M+    +     EA
Sbjct: 225 -------------------------VSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEA 259

Query: 457 MELFR-VMLSERIKV-DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           +ELFR +ML+    V + VTMV V  AC    AL+  K I+AYI + G+   + + +AL+
Sbjct: 260 LELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALI 319

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
            M+ARCG  +    +F RM K+DV  W + I +  + G G +A+++F EM+  G  P  I
Sbjct: 320 TMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHI 379

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ VL ACSH GLV +G  LF SM   HG+ P + HY CMVDLLGRA  L EA  +I+ 
Sbjct: 380 SFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIED 439

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           + +EP   +WGSLL AC+ H +V++A  A++R+ +L+P  +G +VLL++IYA A  W  V
Sbjct: 440 LRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEV 499

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
            RV+  +  + ++K+PG S IEV  K++ FTS DE +P+   + ++L  ++  ++  GY 
Sbjct: 500 KRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYT 559

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           P    VL D+D++EK+ ++  HSEKLA+AFGLI+TSK   IR+ KNLRLC DCHS  K +
Sbjct: 560 PQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFI 619

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SK  DREI+VRD NRFH F+ G CSC D+W
Sbjct: 620 SKFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 193/365 (52%), Gaps = 15/365 (4%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +L++    H  ++  G    P   +K++   +++ T ++   A+K FD   K      T+
Sbjct: 84  SLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDN---ARKVFDKTRK-----RTI 135

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS----SAFGEGVQ 159
           +++N+L R  +  G G + + LY  +   G+  D+FT+ ++L AC  S    S   +G +
Sbjct: 136 YVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKE 195

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  I++ G+   V V   L++ Y   G +     VFDEM  +NVVSW+++I   A+   
Sbjct: 196 IHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGK 255

Query: 220 PKEAVYLFFEMV--EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
           P EA+ LF EM+       PNSVTMV V+ ACA    LE G  + AYI   G+ +   ++
Sbjct: 256 PYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVI 315

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
           +AL+ MY +CG +++ + +F     +++VL N+++S+Y   G  R+A+ I +EM+ HG  
Sbjct: 316 SALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFS 375

Query: 338 PDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           P  ++ +S + A +  G +  G ++    V  +G++        M+D+  +  + + A +
Sbjct: 376 PSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAK 435

Query: 397 IFDHM 401
           I + +
Sbjct: 436 IIEDL 440



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 173/341 (50%), Gaps = 10/341 (2%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P + T   ++ +  + ++  + + VH  +V  GFD+D F+   LIN + E   + + R+V
Sbjct: 67  PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKV 126

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK---- 251
           FD+  +R +  W +L  A A      + + L+  M   G+  +  T   ++ AC      
Sbjct: 127 FDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECL 186

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           +  L+ G  + A+I   G  A+  ++  L+DMY + G V  A  +F E   +N+V  + +
Sbjct: 187 VSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAM 246

Query: 312 MSNYVRLGLAREALAILDEMLL--HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           ++ Y + G   EAL +  EM+L  H   P+ VTM+S + A A    L  G++ H Y+LR 
Sbjct: 247 IACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRR 306

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GL+    + + +I MY +CGK E    IFD M  K VV WNSLI+    +G    A ++F
Sbjct: 307 GLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIF 366

Query: 430 SEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
            EM        HIS+ ++LG  +   + EE  +LF  M+ E
Sbjct: 367 EEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKE 407



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 11/260 (4%)

Query: 45  LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
           L + K+ H HIL+ G G     ++ ++   A+ G    ++YA   FD     N  S    
Sbjct: 190 LQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGC---VSYASAVFDEMPVKNVVS---- 242

Query: 105 MYNSLIRGYSCIGLGVEAISLYVE--LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
            ++++I  Y+  G   EA+ L+ E  L     +P+  T   VL AC   +A  +G  +H 
Sbjct: 243 -WSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHA 301

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            I++ G D  + V + LI  Y  CG +  G+ +FD M +++VV W SLI +       ++
Sbjct: 302 YILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRK 361

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNALV 281
           A+ +F EM++ G  P+ ++ + V+ AC+    +E G ++  + + E G++ +      +V
Sbjct: 362 AIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMV 421

Query: 282 DMYMKCGAVDTAKQLFGECK 301
           D+  +   +D A ++  + +
Sbjct: 422 DLLGRANRLDEAAKIIEDLR 441


>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
 gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
          Length = 1495

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/528 (40%), Positives = 325/528 (61%), Gaps = 33/528 (6%)

Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMC 362
           N+ + NT++  Y  +G +  A ++  EM + G   PD  T    + A   + D+  G   
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
           H  V+R+G      + N+++ +Y  CG                               DV
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCG-------------------------------DV 172

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
            SA +VF +MP +D ++WN+++ G  +    EEA+ L+  M S+ IK D  T+V + SAC
Sbjct: 173 ASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC 232

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             +GAL L K ++ Y+ K G+  ++  +  L+D++ARCG  + A  +F  M  ++  +WT
Sbjct: 233 AKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292

Query: 543 AAIGAMAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
           + I  +A+ G G++A+ELF  M   +G+ P  I FVG+L ACSH G+V +G+  FR M +
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352

Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
            + + P+I H+GCMVDLL RAG + +A + IKSMP++PN VIW +LL AC  H + D+A 
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412

Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
           +A  +I +L+P  SG +VLLSN+YAS  +W++V ++R QM   G++K+PG S +EV  +V
Sbjct: 413 FARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRV 472

Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
           HEF  GD+SHP+ + I + L+EM  RLR  GYVP ++NV +DV+E+EK+  + +HSEK+A
Sbjct: 473 HEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIA 532

Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
           +AF LIST +  PI VVKNLR+C DCH   KLVSKVY+REI+VRD +R
Sbjct: 533 IAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 205/391 (52%), Gaps = 17/391 (4%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISK-VVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           ++ +L+Q H   ++ G+    + + K ++     + +   ++YA K F       E    
Sbjct: 29  SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKI----EKPIN 84

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVH 161
           +F++N+LIRGY+ IG  + A SLY E+   G++ PD  T+PF++ A T  +    G  +H
Sbjct: 85  VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
             +++ GF   ++V+N L++ Y  CGD+    +VFD+M E+++V+W S+I   A    P+
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           EA+ L+ EM  +GIKP+  T+V ++SACAK+  L LG RV  Y+ ++G+  N    N L+
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LLHGPRPDR 340
           D+Y +CG V+ AK LF E  D+N V   +++      G  +EA+ +   M    G  P  
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 324

Query: 341 VTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
           +T +  + A +  G +  G     RM   Y +   +E +      M+D+  + G+ + A 
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF----GCMVDLLARAGQVKKAY 380

Query: 396 RIFDHMS-NKTVVSWNSLIAGLIKNGDVESA 425
                M     VV W +L+     +GD + A
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 4/226 (1%)

Query: 425 AREVFSEMPGRDHIS-WNTMLGGLTQENMFEEAMELFRVM-LSERIKVDRVTMVGVASAC 482
           A +VFS++    ++  WNT++ G  +      A  L+R M +S  ++ D  T   +  A 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
             +  + L + I++ + ++G    + +  +L+ ++A CGD   A +VF +M ++D+ AW 
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
           + I   A  G  E+A+ L+ EM  +GIKPD    V +L+AC+  G +  G  +   M  +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 603 HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
            G++  +     ++DL  R G + EA  L   M V+ N V W SL+
Sbjct: 252 -GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/593 (37%), Positives = 337/593 (56%), Gaps = 34/593 (5%)

Query: 255 LELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSN 314
           +E G R+ + +   G     +  N LV MY KCG +D A+ +F    +R +V  + ++  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 315 YVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG-LE 372
           Y   G  +EAL +   M   G   P+ +T     +A   + DL  GR  H   + +G L+
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 373 GWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
             ++I  N +++MY++CG                                +E AR+VF  
Sbjct: 121 SSNAILENALLNMYVRCG-------------------------------SLEEARKVFDT 149

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
           M   D  SW +M+   T+     EA+ELF  M  E I    VT+  V +AC   GAL + 
Sbjct: 150 MDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVG 209

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K I++ ++ +G H  +   TAL+DM+A+CG  + + +VF  ME R+  +WTA I A+A  
Sbjct: 210 KQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQH 269

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
           G G++A+ELF EM  +G+  D+  F+ VL ACSH GL+ +    F SM + + ++P   H
Sbjct: 270 GQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETH 329

Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
           Y   +D +GRAG L +A +LI SMP  P  + W +LL AC+ H   + A   AE +++L 
Sbjct: 330 YCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLA 389

Query: 672 PEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESH 731
           PE S  + LL N+YA+ G++ +  RVR  M ++G++K+PG S IEV  KVHEF +GD +H
Sbjct: 390 PEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAH 449

Query: 732 PEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSK 791
           P  + I   L ++  R+R+AGYVP+  +VL  V+E+EK+ L+  HSEKLA+AFGLI+T  
Sbjct: 450 PSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPP 509

Query: 792 TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
             P+ +VKNLR+C DCH+  K+++K+  R I+VRD +RFH F  G CSC D+W
Sbjct: 510 GTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 168/318 (52%), Gaps = 7/318 (2%)

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           EG ++H  +   GF R    +N L++ Y +CG + + R +F+ + ER VVSW+++I A A
Sbjct: 3   EGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYA 62

Query: 216 RRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG--MKA 272
                +EA+ LF  M  +G ++PN++T   V +AC  +++LE G  + A     G    +
Sbjct: 63  LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           NA++ NAL++MY++CG+++ A+++F      +     ++++         EAL +   M 
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMN 182

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
           L G  P  VT+ S ++A A  G L  G+  H  +  +G          ++DMY KCG  E
Sbjct: 183 LEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLE 242

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR----DHISWNTMLGGLT 448
            + ++F  M  +  VSW ++IA L ++G  + A E+F EM       D  ++  +L   +
Sbjct: 243 CSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACS 302

Query: 449 QENMFEEAMELFRVMLSE 466
              + +E++E F  M+ +
Sbjct: 303 HAGLIKESLEFFHSMVED 320



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 34/366 (9%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQV 160
           T+  ++++I  Y+  G G EA+ L+  +   G + P+  TF  V NAC       +G ++
Sbjct: 50  TVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREI 109

Query: 161 HGAIVKMG--FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           H   +  G     +  +EN L+N Y  CG + + R+VFD M   +  SWTS+I AC    
Sbjct: 110 HALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENC 169

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
              EA+ LF  M  EGI P SVT+  V++ACA    L++G ++ + +D  G  ++ L   
Sbjct: 170 ELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQT 229

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
           AL+DMY KCG+++ + ++F   + RN V    +++   + G   EAL +  EM L G   
Sbjct: 230 ALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVA 289

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D  T +  + A +  G           +++  LE + S    M++ Y     +   CR  
Sbjct: 290 DATTFICVLRACSHAG-----------LIKESLEFFHS----MVEDYAIAPTETHYCRAL 334

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQENMFEEAM 457
           D +                + G ++ A E+   MP   + ++W T+L      +  E A 
Sbjct: 335 DTIG---------------RAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERAT 379

Query: 458 ELFRVM 463
           ++  ++
Sbjct: 380 KVAELL 385


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 249/789 (31%), Positives = 404/789 (51%), Gaps = 40/789 (5%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q    ++K GL  K +  + ++     MG  +   YA      YI D  +      +NS
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVD---YAN-----YIFDQMSERDTISWNS 214

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +   Y+  G   E+  ++  +  F    +  T   +L+          G  +HG +VKMG
Sbjct: 215 IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 274

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           FD  V V N L+  Y   G  V+   VF +M  ++++SW SL+ +        +A+ L  
Sbjct: 275 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 334

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
            M+  G   N VT    ++AC      E G  +   +   G+  N ++ NALV MY K G
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 394

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            +  ++++  +   R++V  N ++  Y       +ALA    M + G   + +T++S +S
Sbjct: 395 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 454

Query: 349 ASAQLGDLL-CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
           A    GDLL  G+  H Y++  G E  + + N++I MY KCG                  
Sbjct: 455 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG------------------ 496

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
                        D+ S++++F+ +  R+ I+WN ML         EE ++L   M S  
Sbjct: 497 -------------DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           + +D+ +     SA   L  L+  + ++    K G   D  +  A  DM+++CG+    +
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 603

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           ++      R + +W   I A+   G  E+    F+EML  GIKP  + FV +LTACSHGG
Sbjct: 604 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 663

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV++G   +  +    G+ P I H  C++DLLGR+G L EA   I  MP++PND++W SL
Sbjct: 664 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 723

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           LA+C+ H N+D    AAE +++L+PE   V+VL SN++A+ G+W +V  VR QM  + I+
Sbjct: 724 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 783

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K    S +++  KV  F  GD +HP+   I + L ++   ++++GYV D +  L D DE+
Sbjct: 784 KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEE 843

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           +K++ L +HSE+LA+A+ L+ST +   +R+ KNLR+C DCHS  K VS+V  R I++RD 
Sbjct: 844 QKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQ 903

Query: 828 NRFHFFRQG 836
            RFH F +G
Sbjct: 904 YRFHHFERG 912



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 267/551 (48%), Gaps = 35/551 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS-SAFGEGVQVHGAI 164
           +N+++ G   +GL +E +  + ++   GI P  F    ++ AC +S S F EGVQVHG +
Sbjct: 9   WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
            K G   DV+V   +++ YG  G +   R+VF+EM +RNVVSWTSL+   + +  P+E +
Sbjct: 69  AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            ++  M  EG+  N  +M  VIS+C  L++  LG ++   + + G+++   + N+L+ M 
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
              G VD A  +F +  +R+ +  N+I + Y + G   E+  I   M       +  T+ 
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           + +S    +     GR  HG V++ G +    +CNT++ MY   G+   A  +F  M  K
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 308

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            ++SWNSL+A  + +G     R +                          +A+ L   M+
Sbjct: 309 DLISWNSLMASFVNDG-----RSL--------------------------DALGLLCSMI 337

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
           S    V+ VT     +AC      +  + ++  +  +G+  +  +  ALV M+ + G+  
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC- 583
            + +V  +M +RDV AW A IG  A + + ++A+  F  M  +G+  + I  V VL+AC 
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
             G L+ +G  L   +      S + V    ++ +  + G L  + DL   +    N + 
Sbjct: 458 LPGDLLERGKPLHAYIVSAGFESDEHVK-NSLITMYAKCGDLSSSQDLFNGLD-NRNIIT 515

Query: 644 WGSLLAACQKH 654
           W ++LAA   H
Sbjct: 516 WNAMLAANAHH 526



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 288/611 (47%), Gaps = 52/611 (8%)

Query: 50  QPHCHILKQGLGHKPSYISKVVCTCAQM---GTFESLTYAQKAFDYYIKDNETSATLFMY 106
           Q H  + K GL      +S V  + A +   G +  ++ ++K F+     N  S T    
Sbjct: 63  QVHGFVAKSGL------LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT---- 112

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
            SL+ GYS  G   E I +Y  + G G+  ++ +   V+++C        G Q+ G +VK
Sbjct: 113 -SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVK 171

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
            G +  + VEN LI+  G  G++     +FD+MSER+ +SW S+  A A+    +E+  +
Sbjct: 172 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 231

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F  M     + NS T+  ++S    + + + G  +   + ++G  +   + N L+ MY  
Sbjct: 232 FSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 291

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
            G    A  +F +   ++L+  N++M+++V  G + +AL +L  M+  G   + VT  SA
Sbjct: 292 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 351

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
           ++A         GR+ HG V+ +GL     I N ++ MY K G                 
Sbjct: 352 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG----------------- 394

Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
                         ++  +R V  +MP RD ++WN ++GG  ++   ++A+  F+ M  E
Sbjct: 395 --------------EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 440

Query: 467 RIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
            +  + +T+V V SAC   G  L+  K ++AYI   G   D  +  +L+ M+A+CGD   
Sbjct: 441 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 500

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           +  +F  ++ R++  W A + A A  G+GE+ ++L ++M   G+  D   F   L+A + 
Sbjct: 501 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 560

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-- 643
             ++ +G  L      + G       +    D+  + G +GE   ++K +P   N  +  
Sbjct: 561 LAVLEEGQQLHGLAVKL-GFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPS 616

Query: 644 WGSLLAACQKH 654
           W  L++A  +H
Sbjct: 617 WNILISALGRH 627



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 115/228 (50%), Gaps = 3/228 (1%)

Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL-DL 490
           MP R+ +SWNTM+ G+ +  ++ E ME FR M    IK     +  + +ACG  G++   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
              ++ ++ K+G+  D+ ++TA++ ++   G    + +VF  M  R+V +WT+ +   + 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
           +G  E+ ++++  M  +G+  +      V+++C      + G  +   +    G+  ++ 
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVK-SGLESKLA 179

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
               ++ +LG  G +  A  +   M  E + + W S+ AA  ++ +++
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 226


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/665 (33%), Positives = 361/665 (54%), Gaps = 31/665 (4%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           Y+ DN       ++N ++ GY   G    AI +++E+    I P+  TF  VL+ C   +
Sbjct: 114 YLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEA 173

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
               G Q+HG  V  G + D  V N L+  Y +C  +   R++FD + + ++VSW  +I 
Sbjct: 174 MLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIIS 233

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
              +  L  EA +LF  M+  GIKP+S+T    +    +L +L+    +  YI    +  
Sbjct: 234 GYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL 293

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           +  + +AL+D+Y KC  V+ A++   +    + V+C T++S YV  G  +EAL     ++
Sbjct: 294 DVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLV 353

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
               +P  VT  S   A A L  L  G+  HG +++  L+    + + ++DMY KCG+ +
Sbjct: 354 QERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLD 413

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
           +ACR+F+ ++ K                               D I WN+M+   +Q   
Sbjct: 414 LACRVFNRITEK-------------------------------DAICWNSMITSCSQNGR 442

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
             EA+ LFR M  E  + D V++ G  SAC  L AL   K I+  + K  +  D+   ++
Sbjct: 443 PGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESS 502

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           L+DM+A+CG+   + +VF RM++++  +W + I A    G+ ++ + LF+EMLR GI+PD
Sbjct: 503 LIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPD 562

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            + F+G+++AC H G V++G   +  MT+ +G+  ++ HY C+ D+ GRAG L EA + I
Sbjct: 563 HVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETI 622

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
            SMP  P+  +WG+LL AC  H NV++A  A++ + +LDP  SG +VLL+N+ A AGKW 
Sbjct: 623 NSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWR 682

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
            V +VR  MKE+G+RK+PG S IEVN   H F + D SHP    I S+L  +   L+  G
Sbjct: 683 KVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEG 742

Query: 753 YVPDL 757
           YVP L
Sbjct: 743 YVPQL 747



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 168/582 (28%), Positives = 285/582 (48%), Gaps = 50/582 (8%)

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           SL  A+  F Y ++   TSA    +N +IRG++ +G    A+  Y+++ G G+ PDK+TF
Sbjct: 7   SLKDAKNLF-YTLQLGCTSA----WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
           P+V+ AC    +   G  VH  +  MG   DVFV + LI  Y E G + D + +FD + +
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           ++ V W  ++    +      A+ +F EM    IKPNSVT  CV+S CA    L+LG ++
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
                  G++ ++ + N L+ MY KC  +  A++LF      +LV  N I+S YV+ GL 
Sbjct: 182 HGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLM 241

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EA  +   M+  G +PD +T  S +    +L  L   +  HGY++R+ +     + + +
Sbjct: 242 GEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSAL 301

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           ID+Y KC   EMA +     S+   V   ++I+G + NG                     
Sbjct: 302 IDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKN------------------- 342

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                       +EA+E FR ++ ER+K   VT   +  A   L AL+L K ++  I K 
Sbjct: 343 ------------KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +     + +A++DM+A+CG    A +VF R+ ++D   W + I + +  G   +A+ LF
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG------VSPQIVHYGCM 615
            +M  +G + D +   G L+AC++   ++ G        +IHG      +   +     +
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYG-------KEIHGLMIKGPLRSDLYAESSL 503

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
           +D+  + G L  +  +   M  E N+V W S+++A   H ++
Sbjct: 504 IDMYAKCGNLNFSRRVFDRMQ-EKNEVSWNSIISAYGNHGDL 544



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 12/202 (5%)

Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
           ++ G ++ A+ +F  +      +WN M+ G T    F  A+  +  ML   +  D+ T  
Sbjct: 3   VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFP 62

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V  AC  L ++ + K ++  +   G+  D+ + ++L+ ++A  G    A  +F  + ++
Sbjct: 63  YVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D   W   +      G+   A+++F EM    IKP+S+ F  VL+ C+   +++ G    
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG---- 178

Query: 597 RSMTDIHGVSPQIVHYGCMVDL 618
              T +HG++      GC ++L
Sbjct: 179 ---TQLHGIA-----VGCGLEL 192



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)

Query: 516 MFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIV 575
           M+ R G  + A  +F  ++    SAW   I    M G    A+  + +ML  G+ PD   
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
           F  V+ AC     V  G  +     ++ G+   +     ++ L    G L +A  L  ++
Sbjct: 61  FPYVVKACCGLKSVKMG-KIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 636 PVEPNDVIWGSLLAACQKHQNVD--IAAYAAERITELDPEKSGVHVLLS 682
           P + + V+W  +L    K+ +    I  +   R +E+ P       +LS
Sbjct: 120 P-QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLS 167


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/774 (31%), Positives = 397/774 (51%), Gaps = 64/774 (8%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           Y++LI  +S +    EAI L+  +   GI P++++F  +L AC +S     G+QVH   +
Sbjct: 171 YSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAI 230

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G+ + VFV N LI  YG+CG +     +FDEM +R++ SW ++I +  +    ++A+ 
Sbjct: 231 KLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALE 290

Query: 226 LFFEMVE-EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
           LF  + + +G K +  T+  +++ACA+      G  + AY   +G++ N  + NA++  Y
Sbjct: 291 LFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFY 350

Query: 285 MKCGA-------------------------------VDTAKQLFGECKDRNLVLCNTIMS 313
            +CG+                               VD A  +F +  ++N V  N +++
Sbjct: 351 TRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLT 410

Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
            + +     +AL +   M+  G      T+   ++A   L  L   R  HG++++ G   
Sbjct: 411 GFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRS 470

Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
              I   +IDM  KCG+ + A R+F  +S                               
Sbjct: 471 NACIEAALIDMCSKCGRMDDADRMFQSLSTD----------------------------- 501

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-DRVTMVGVASACGYLGALDLAK 492
           G + I   +M+ G  +  + EEA+ LF    SE   V D V    +   CG LG  ++ K
Sbjct: 502 GGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGK 561

Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
            I+    K G H ++ +  +++ M+++C +   A++ F  M   DV +W   I    +  
Sbjct: 562 QIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHR 621

Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTA--CSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G++A+ +++ M + GIKPD+I FV +++A   +   L+++   LF SM  IH + P   
Sbjct: 622 QGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSE 681

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           HY  +V +LG  GLL EA +LI  MP +P   +W +LL  C+ H N  I    A+ I  +
Sbjct: 682 HYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGM 741

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           +P     +VL+SN+YA++G+W     VR  M+++G+RK P  S + +  ++H F + D+S
Sbjct: 742 EPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKS 801

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           HP+ N+I S L  +  +   AGY PD++ VL +V+EQ+KK  L +HS KLA  +GL+ T 
Sbjct: 802 HPQSNDIYSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTR 861

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              PIRVVKN+ LC DCH+F K  + V  REII RD + FH F  G CSC  +W
Sbjct: 862 PGEPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGYW 915



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 266/512 (51%), Gaps = 22/512 (4%)

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H +I+K+G   D  + N +I  Y + G +VD   VF  MS  +VVS+++LI + ++ + 
Sbjct: 126 LHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNR 183

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
             EA+ LFF M   GI+PN  + V +++AC +   LE+G +V A   +LG      + NA
Sbjct: 184 ETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANA 243

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH--GPR 337
           L+ +Y KCG +D A  LF E   R++   NT++S+ V+ GL+ E    L  +L    G +
Sbjct: 244 LIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVK-GLSYEKALELFRVLNQNKGFK 302

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
            D+ T+ + ++A A+    + GR  H Y +R GLE   S+ N +I  Y +CG       +
Sbjct: 303 ADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAAL 362

Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
           F+ M  + +++W  +I   ++ G V+ A ++F++MP ++ +S+N +L G  + N   +A+
Sbjct: 363 FERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKAL 422

Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
            LF  M+ E  ++   T+ GV +ACG L  L++++ I+ +I K G   +  +  AL+DM 
Sbjct: 423 NLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMC 482

Query: 518 ARCGDPQRAMQVFRRMEKRDVSA--WTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSI 574
           ++CG    A ++F+ +     ++   T+ I   A  G  E+A+ LF     +G +  D +
Sbjct: 483 SKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEV 542

Query: 575 VFVGVLTACSHGGL--VNQGWHLFRSMTDIH---GVSPQIVHYGCMVDLLGRAGLLGEAL 629
            F  +L  C   G   V +  H     T  H   GV   I      + +  +   + +A+
Sbjct: 543 AFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSI------ISMYSKCYNIDDAI 596

Query: 630 DLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
               +MP   +DV+ W  L+A    H+  D A
Sbjct: 597 KAFNTMP--GHDVVSWNGLIAGQLLHRQGDEA 626


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 275/855 (32%), Positives = 439/855 (51%), Gaps = 65/855 (7%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPS--YISK 69
           L++ T+ +   Q      P    S  +L++ ++   +   H   L++GL H+PS    + 
Sbjct: 45  LSSITMASPQQQLDHSALPPAIKSAAALRDARSARAI---HAAALRRGLLHRPSPAVANA 101

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++   A+ G   +      A + +   ++++     +NSLI    C+    +     +  
Sbjct: 102 LLTAYARCGRLAA------ALEVFGSISDSAHDAVSFNSLISAL-CLFRRWDHALAALRA 154

Query: 130 AGFGILP-DKFTFPFVLNACTK----SSAFGEGVQVHGAIVKMGF--DRDVFVENCLINF 182
              G  P   FT   VL A +     ++A   G + H   +K G       F  N L++ 
Sbjct: 155 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 214

Query: 183 YGECGDIVDGRRVFDEMS--ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           Y   G + D +R+F   +    +VV+W +++    +  +  EAV   ++MV  G++P+ V
Sbjct: 215 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 274

Query: 241 TMVCVISACAKLQNLELGDRVCAYI---DELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           T    + AC++L+ L++G  + AY+   DEL   AN+ + +ALVDMY     V  A+Q+F
Sbjct: 275 TFASALPACSRLELLDVGREMHAYVIKDDELA--ANSFVASALVDMYATHEQVGKARQVF 332

Query: 298 GECKD--RNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLG 354
               D  + L + N ++  Y + G+  EAL +   M    G  P   TM S + A A+  
Sbjct: 333 DMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSE 392

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
                   HGYV++ G+ G   + N ++DMY + GK ++A RIF                
Sbjct: 393 AFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIF---------------- 436

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM--LSER-IKVD 471
                           ++P  D +SWNT++ G   +    +A +L R M  L E  +  +
Sbjct: 437 -------------AMVDLP--DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 481

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
            +T++ +   C  L A    K I+ Y  ++ +  D+ + +ALVDM+A+CG    +  VF 
Sbjct: 482 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 541

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVN 590
           R+ +R+   W   I A  M G G +A  LF+ M   G  +P+ + F+  L ACSH G+V+
Sbjct: 542 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 601

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV-IWGSLLA 649
           +G  LF +M   HGV P      C+VD+LGRAG L EA  ++ SM      V  W ++L 
Sbjct: 602 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLG 661

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC+ H+NV +   A ER+ EL+PE++  +VLL NIY++AG+WT  A VR +M+ +G+ K 
Sbjct: 662 ACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKE 721

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S IEV+G +H F +G+ +HP    + + +  +   +   GY PD + VL D+D+ +K
Sbjct: 722 PGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDK 781

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
             +L  HSEKLA+AFGL+  +    IRV KNLR+C DCH  AK +SK+  REI++RD  R
Sbjct: 782 AAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRR 841

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR G CSC D+W
Sbjct: 842 FHHFRNGQCSCGDYW 856


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 275/855 (32%), Positives = 439/855 (51%), Gaps = 65/855 (7%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPS--YISK 69
           L++ T+ +   Q      P    S  +L++ ++   +   H   L++GL H+PS    + 
Sbjct: 43  LSSITMASPQQQLDHSALPPAIKSAAALRDARSARAI---HAAALRRGLLHRPSPAVANA 99

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
           ++   A+ G   +      A + +   ++++     +NSLI    C+    +     +  
Sbjct: 100 LLTAYARCGRLAA------ALEVFGSISDSAHDAVSFNSLISAL-CLFRRWDHALAALRA 152

Query: 130 AGFGILP-DKFTFPFVLNACTK----SSAFGEGVQVHGAIVKMGF--DRDVFVENCLINF 182
              G  P   FT   VL A +     ++A   G + H   +K G       F  N L++ 
Sbjct: 153 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 212

Query: 183 YGECGDIVDGRRVFDEMS--ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
           Y   G + D +R+F   +    +VV+W +++    +  +  EAV   ++MV  G++P+ V
Sbjct: 213 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 272

Query: 241 TMVCVISACAKLQNLELGDRVCAYI---DELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
           T    + AC++L+ L++G  + AY+   DEL   AN+ + +ALVDMY     V  A+Q+F
Sbjct: 273 TFASALPACSRLELLDVGREMHAYVIKDDELA--ANSFVASALVDMYATHEQVGKARQVF 330

Query: 298 GECKD--RNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSAVSASAQLG 354
               D  + L + N ++  Y + G+  EAL +   M    G  P   TM S + A A+  
Sbjct: 331 DMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSE 390

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIA 414
                   HGYV++ G+ G   + N ++DMY + GK ++A RIF                
Sbjct: 391 AFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIF---------------- 434

Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM--LSER-IKVD 471
                           ++P  D +SWNT++ G   +    +A +L R M  L E  +  +
Sbjct: 435 -------------AMVDLP--DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPN 479

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
            +T++ +   C  L A    K I+ Y  ++ +  D+ + +ALVDM+A+CG    +  VF 
Sbjct: 480 AITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFD 539

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVN 590
           R+ +R+   W   I A  M G G +A  LF+ M   G  +P+ + F+  L ACSH G+V+
Sbjct: 540 RLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 599

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDV-IWGSLLA 649
           +G  LF +M   HGV P      C+VD+LGRAG L EA  ++ SM      V  W ++L 
Sbjct: 600 RGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLG 659

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
           AC+ H+NV +   A ER+ EL+PE++  +VLL NIY++AG+WT  A VR +M+ +G+ K 
Sbjct: 660 ACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKE 719

Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
           PG S IEV+G +H F +G+ +HP    + + +  +   +   GY PD + VL D+D+ +K
Sbjct: 720 PGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDK 779

Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
             +L  HSEKLA+AFGL+  +    IRV KNLR+C DCH  AK +SK+  REI++RD  R
Sbjct: 780 AAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRR 839

Query: 830 FHFFRQGSCSCSDFW 844
           FH FR G CSC D+W
Sbjct: 840 FHHFRNGQCSCGDYW 854


>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 597

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/586 (38%), Positives = 332/586 (56%), Gaps = 33/586 (5%)

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ A +   G      ++  L++  +  G +  A+Q+F E     + L NT+   YVR  
Sbjct: 29  KIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQ 88

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
           L  E++ +  +M   G RPD  T    V A +QLG L CG   H +VL+NG E    +  
Sbjct: 89  LPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVAT 148

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++ MYMK G                               ++ SA  +F  M  +D ++
Sbjct: 149 ELVMMYMKFG-------------------------------ELSSAEFLFESMQVKDLVA 177

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           WN  +    Q      A+E F  M ++ ++ D  T+V + SACG LG+LD+ + IY    
Sbjct: 178 WNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRAR 237

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K  I C++ +  A +DM  +CG  + A  +F  M++R+V +W+  I   AM G+  +A+ 
Sbjct: 238 KEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALA 297

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH--GVSPQIVHYGCMVD 617
           LF  M  +G++P+ + F+GVL+ACSH GLVN+G   F  M  ++   + P+  HY CMVD
Sbjct: 298 LFTMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVD 357

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
           LLGR+GLL EA + IK M VEP+  IWG+LL AC  H+++ +    A+ + E  P+    
Sbjct: 358 LLGRSGLLEEAYEFIKKMRVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY 417

Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
           HVLLSNIYA+AGKW  V +VR +M++ G +K+   SS+E +GK+H F  GD SHP+   I
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAI 477

Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
              L E+  ++R+ GYVPD  +V  DV+ +EK+  LSHHSEKLA+AFGLI+     PIRV
Sbjct: 478 YEKLDEILKKIRNMGYVPDTGSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRV 537

Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
           +KNLR C DCH F+K VS++  REII+RD NRFH FR G    S F
Sbjct: 538 MKNLRTCDDCHVFSKFVSRLTSREIIMRDKNRFHHFRNGDKEWSKF 583



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 195/381 (51%), Gaps = 13/381 (3%)

Query: 26  AKTTPKDSPSIGSL--KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
           AK TP     +  L   +     +LK+ H  +++ G   K S +++++     +G    +
Sbjct: 3   AKQTPLTKQMLSELLRASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVG---DM 59

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
            YA++ FD   K       +F++N+L +GY    L  E++ LY ++   G+ PD+FT+PF
Sbjct: 60  CYARQVFDEMPK-----PRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPF 114

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           V+ A ++      GV +H  ++K GF+    V   L+  Y + G++     +F+ M  ++
Sbjct: 115 VVKAISQLGVLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKD 174

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +V+W + I  C +      A+  F +M  + ++ +S T+V ++SAC +L +L++G+ +  
Sbjct: 175 LVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYD 234

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              +  ++ N ++ NA +DM++KCG+ + A+ LF + K RN+V  +T++  Y   G + E
Sbjct: 235 RARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGE 294

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR---NGLEGWDSICNT 380
           ALA+   M   G RP+ VT L  +SA +  G +  G+     ++R     LE        
Sbjct: 295 ALALFTMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYAC 354

Query: 381 MIDMYMKCGKQEMACRIFDHM 401
           M+D+  + G  E A      M
Sbjct: 355 MVDLLGRSGLLEEAYEFIKKM 375



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 189/396 (47%), Gaps = 35/396 (8%)

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           ++H  +++ GF     +   L+      GD+   R+VFDEM +  +  W +L     R  
Sbjct: 29  KIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQ 88

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           LP E+V L+ +M + G++P+  T   V+ A ++L  L  G  + A++ + G +   ++  
Sbjct: 89  LPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVAT 148

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
            LV MYMK G + +A+ LF   + ++LV  N  ++  V+ G +  AL   ++M     + 
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQF 208

Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           D  T++S +SA  QLG L  G   +    +  +E    + N  +DM++KCG  E A  +F
Sbjct: 209 DSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARVLF 268

Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
           D M  + VVSW+++I G   NGD                                 EA+ 
Sbjct: 269 DDMKQRNVVSWSTMIVGYAMNGDS-------------------------------GEALA 297

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK---NGIHCDMQLATALVD 515
           LF +M +E ++ + VT +GV SAC + G ++  K  ++ + +     +    +    +VD
Sbjct: 298 LFTMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVD 357

Query: 516 MFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAM 550
           +  R G  + A +  ++M  + D   W A +GA A+
Sbjct: 358 LLGRSGLLEEAYEFIKKMRVEPDTGIWGALLGACAV 393



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 10/173 (5%)

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
           K I+A + + G      L T L++     GD   A QVF  M K  +  W          
Sbjct: 28  KKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRN 87

Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG----WHLFRSMTDIHGVSP 607
               ++V L+ +M   G++PD   +  V+ A S  G++  G     H+ ++  +  G+  
Sbjct: 88  QLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVA 147

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
                  +V +  + G L  A  L +SM V+ + V W + +A C +  N  IA
Sbjct: 148 TE-----LVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFIAVCVQTGNSAIA 194


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/574 (36%), Positives = 339/574 (59%), Gaps = 31/574 (5%)

Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
           + N +  N L++ Y++ G +++A++LF E  +RN+   N +++   +    ++AL++  E
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           M   G  PD  T+ S +   A L  LL G+  H  +L+ G E    + +++  MY     
Sbjct: 185 MYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY----- 239

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
                                     IK+G +    ++   MP R  ++WNT++ G  Q 
Sbjct: 240 --------------------------IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQN 273

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
              EE +  + +M     + D++T V V SAC  L  L   + I+A + K G    + + 
Sbjct: 274 GCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVV 333

Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
           ++L+ M++R G  + +++ F   E  DV  W++ I A    G GE+A+ELF++M    ++
Sbjct: 334 SSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKME 393

Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
            + + F+ +L ACSH GL  +G   F  M   + + P+I HY C+VDLLGRAG L EA  
Sbjct: 394 ANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEG 453

Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
           +I+SMPV+P+ +IW +LLAAC+ H+  ++A   +E I +LDP  +  +VLLSNI+ASA  
Sbjct: 454 MIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARN 513

Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
           W NV+++R  M+++ +RK PG S +E+   VH+F+ GD+SHP+   I   L+E+   L+ 
Sbjct: 514 WLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQ 573

Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
            GYVP+L +VL D+D +EK+Y L+HHSEK A+AF L++TS+ +PIRV+KNLR+C DCH+ 
Sbjct: 574 HGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNA 633

Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            K +S++ +REIIVRD +RFH F+ G CSC ++W
Sbjct: 634 IKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 211/466 (45%), Gaps = 64/466 (13%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG--------- 184
           I  D   F  +L +C K  +   G QVH  I+  G  +D F+ N L+NFY          
Sbjct: 58  IWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSL 117

Query: 185 ----------------------ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
                                 + GD+   +++FDEMSERN+ +W ++I    + +  K+
Sbjct: 118 VLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQ 177

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+ LF EM   G  P+  T+  V+  CA L++L  G  V A + + G + ++++ ++L  
Sbjct: 178 ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH 237

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY+K G++   ++L      R +V  NT+++   + G   E L   + M + G RPD++T
Sbjct: 238 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 297

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
            +S +SA ++L  L  G+  H  V++ G     ++ +++I MY + G  E + + F    
Sbjct: 298 FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE 357

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
           N  VV W+S+IA    +G  E                               EA+ELF  
Sbjct: 358 NFDVVLWSSMIAAYGFHGRGE-------------------------------EALELFHQ 386

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCG 521
           M   +++ + VT + +  AC + G  +   ++    ++K  +   ++  T +VD+  R G
Sbjct: 387 MEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAG 446

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
             + A  + R M  + D   W   + A  +    E A  +  E+++
Sbjct: 447 RLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIK 492



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 164/337 (48%), Gaps = 7/337 (2%)

Query: 352 QLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNS 411
           +LG L  G+  H  ++ +G      I N +++ Y K G+ + +  +F +M  + V+S+N 
Sbjct: 74  KLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNI 133

Query: 412 LIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           LI G ++ GD+ESA+++F EM  R+  +WN M+ GLTQ    ++A+ LF+ M       D
Sbjct: 134 LINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPD 193

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
             T+  V   C  L +L   + ++A + K G      + ++L  M+ + G      ++ +
Sbjct: 194 EFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIK 253

Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
            M  R V AW   I   A  G  E+ +  +N M   G +PD I FV VL+ACS    + Q
Sbjct: 254 SMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQ 313

Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND--VIWGSLLA 649
           G  +   +    G S  +     ++ +  R+G L    D IK+     N   V+W S++A
Sbjct: 314 GQQIHAEVIKA-GASSVLAVVSSLISMYSRSGCLE---DSIKAFVDRENFDVVLWSSMIA 369

Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYA 686
           A   H   + A     ++ +L  E + V   LS +YA
Sbjct: 370 AYGFHGRGEEALELFHQMEDLKMEANEV-TFLSLLYA 405



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 47/213 (22%)

Query: 481 ACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA 540
           +C  LG+L   K +++ I  +G   D  ++  L++ +++ G  + ++ +F  M +R+V +
Sbjct: 71  SCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMS 130

Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQ-------------------------------GI 569
           +   I      G+ E A +LF+EM  +                               G 
Sbjct: 131 FNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGF 190

Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH------GVSPQIVHYGCMVDLLGRAG 623
            PD      VL  C+       G     +  ++H      G     V    +  +  ++G
Sbjct: 191 LPDEFTLGSVLRGCA-------GLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSG 243

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
            L +   LIKSMP+    V W +L+A   K QN
Sbjct: 244 SLSDGEKLIKSMPIR-TVVAWNTLIAG--KAQN 273


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/715 (34%), Positives = 377/715 (52%), Gaps = 48/715 (6%)

Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
           + P+ +TFPF L AC+  +    G  +H   +  G   D+FV   L++ Y +C  + D  
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAV--YLFFEMVEEGIKPNSVTMVCVISACAK 251
            +F  M  R++V+W +++   A   +   AV   L  +M    ++PN+ T+V ++   A+
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 252 LQNLELGDRVCAYIDELGMKAN----------ALMVNALVDMYMKCGAVDTAKQLFGECK 301
              L  G  V AY     +  N           L+  AL+DMY KCG++  A+++F    
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 302 DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP---RPDRVTMLSAVSASAQLGDLLC 358
            RN V  + ++  +V      +A  +   ML  G     P  +   SA+ A A L  L  
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRM 243

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G   H  + ++G+    +  N+++ MY K                          AGLI 
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAK--------------------------AGLI- 276

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
               + A  +F EM  +D +S++ ++ G  Q    EEA  +F+ M +  ++ D  TMV +
Sbjct: 277 ----DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSL 332

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC +L AL   +  +  +   G+  +  +  AL+DM+A+CG    + QVF  M  RD+
Sbjct: 333 IPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI 392

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W   I    + G G++A  LF EM   G  PD + F+ +L+ACSH GLV +G H F  
Sbjct: 393 VSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHV 452

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M   +G++P++ HY CMVDLL R G L EA + I+SMP+  +  +W +LL AC+ ++N+D
Sbjct: 453 MGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNID 512

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +    +  I EL PE +G  VLLSNIY++AG++   A VR+  K QG +K PG S IE+N
Sbjct: 513 LGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 572

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           G +H F  GD+SHP+   I   L  +   ++  GY PD + VL D++E+EK+  L  HSE
Sbjct: 573 GSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSE 632

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFF 833
           KLA+A+G++S S+   I V KNLR+C DCH+  K +S V  R IIVRD NRFH F
Sbjct: 633 KLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 135/321 (42%), Gaps = 45/321 (14%)

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
           ML H   P+  T   A+ A + L D  CGR  H + +  GL+    +   ++DMY+KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
              A  IF  M  + +V+WN+++AG   +G    A      M  + H             
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH------------- 107

Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD---- 506
                           R++ +  T+V +       GAL     ++AY  +  +H +    
Sbjct: 108 ----------------RLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151

Query: 507 ------MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
                 + L TAL+DM+A+CG    A +VF  M  R+   W+A IG   +     QA  L
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211

Query: 561 FNEMLRQG---IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           F  ML QG   + P SI     L AC+    +  G  L  ++    GV   +     ++ 
Sbjct: 212 FKAMLAQGLCFLSPTSI--ASALRACASLDHLRMGEQL-HALLAKSGVHADLTAGNSLLS 268

Query: 618 LLGRAGLLGEALDLIKSMPVE 638
           +  +AGL+ +A+ L   M V+
Sbjct: 269 MYAKAGLIDQAIALFDEMAVK 289



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)

Query: 38  SLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD-YY 93
           +L+ C +L+ L+   Q H  + K G+    +  + ++   A+ G  +    A   FD   
Sbjct: 231 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ---AIALFDEMA 287

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
           +KD  +      Y++L+ GY   G   EA  ++ ++    + PD  T   ++ AC+  +A
Sbjct: 288 VKDTVS------YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 341

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA 213
              G   HG+++  G   +  + N LI+ Y +CG I   R+VF+ M  R++VSW ++I  
Sbjct: 342 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 401

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
                L KEA  LF EM   G  P+ VT +C++SAC+
Sbjct: 402 YGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 438



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 21/233 (9%)

Query: 30  PKDSPSIGSLKNCKTLNELKQPHCH---ILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
           P  +  +  +  C  L  L+   C    ++ +GL  + S  + ++   A+ G  +    +
Sbjct: 324 PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID---LS 380

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
           ++ F+        S  +  +N++I GY   GLG EA +L++E+   G  PD  TF  +L+
Sbjct: 381 RQVFNMM-----PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 435

Query: 147 ACTKSSAFGEGVQ-VHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMSER- 202
           AC+ S    EG    H  ++  G+     +E+  C+++     G + +       M  R 
Sbjct: 436 ACSHSGLVIEGKHWFH--VMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 493

Query: 203 NVVSWTSLICAC---ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
           +V  W +L+ AC      DL K+   +  E+  EG   N V +  + SA  + 
Sbjct: 494 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTG-NFVLLSNIYSAAGRF 545


>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
 gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
          Length = 590

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/475 (45%), Positives = 302/475 (63%), Gaps = 9/475 (1%)

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKT---VVSWNSLIAGLIKNGDVESAREVFSEMP 433
           + N ++ +Y   G    A R+FD  S  T   VVSWN++++G  K GD+E+AREVF  MP
Sbjct: 118 VTNCLLKLYCALGMLPDARRVFD-TSGATALDVVSWNTMVSGYGKCGDLEAAREVFVRMP 176

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
            R  +SW+ M+    +   F EA+ +F  M     K D V +V V   C +LGAL+  +W
Sbjct: 177 ERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRW 236

Query: 494 IYAYIEKN---GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
           ++ +++     G   ++ L TALVDM+ +CG    A  VF  ++  DV  W A IG +AM
Sbjct: 237 VHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAM 296

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G+G++A+ELF  ML +G  P+   FV  L AC H G V++G  +FRSM D HG+ P+  
Sbjct: 297 NGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSMRD-HGIEPRRE 355

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           HYGC+ DLLGRAGLL EA  ++  MP+EP+   WG+L+++C  H NV +     +++ EL
Sbjct: 356 HYGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIEL 415

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           +P+  G +V L N+YA  G W +   +R  M+E+G +K  G S IE NG VHEF SGD  
Sbjct: 416 EPDDGGRYVALFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTR 475

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD-EQEKKYLLSHHSEKLAMAFGLIST 789
           HP+   I ++L +M  RL+  GYV D + VLLD+D E++K   LS+HSE+LA+AFG+++ 
Sbjct: 476 HPQTRLIYALLEDMEQRLQLIGYVKDTSQVLLDMDNEEDKGNTLSYHSERLALAFGILNI 535

Query: 790 SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
              MPIR+VKNLR+C DCH  AKLVSK+Y REIIVRD +RFH FR G CSC+DFW
Sbjct: 536 PHDMPIRIVKNLRVCRDCHVHAKLVSKLYQREIIVRDRHRFHLFRDGVCSCNDFW 590



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 146/303 (48%), Gaps = 8/303 (2%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           DV   N +++ YG+CGD+   R VF  M ER +VSW+++I AC R     EA+ +F +M 
Sbjct: 148 DVVSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMT 207

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI--DELGMK-ANALMVNALVDMYMKCG 288
             G KP++V +V V+  CA L  LE G  V  ++  + LG +  N ++  ALVDMY KCG
Sbjct: 208 GNGFKPDAVVLVSVLKTCAHLGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCG 267

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            ++ A  +F   +  ++VL N ++      G  + AL +   ML  G  P+  T + A+ 
Sbjct: 268 CMNEAWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALC 327

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A    G +  G      +  +G+E        + D+  + G  E A  +   M  +   S
Sbjct: 328 ACIHTGRVDEGEDVFRSMRDHGIEPRREHYGCLADLLGRAGLLEEAEGVLLDMPMEPHAS 387

Query: 409 -WNSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
            W +L++  + + +V   E   +   E+   D   +  +        ++E+A  L R M+
Sbjct: 388 QWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVALFNLYAVNGLWEDAKAL-RKMM 446

Query: 465 SER 467
            ER
Sbjct: 447 EER 449



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 3/195 (1%)

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           L  ++++I      G   EA+ ++ ++ G G  PD      VL  C    A   G  VH 
Sbjct: 180 LVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRWVHR 239

Query: 163 AIVKM---GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
            +      G   +V +E  L++ Y +CG + +   VFD +   +VV W ++I   A    
Sbjct: 240 FLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAMNGH 299

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            K A+ LF  M+++G  PN  T V  + AC     ++ G+ V   + + G++        
Sbjct: 300 GKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSMRDHGIEPRREHYGC 359

Query: 280 LVDMYMKCGAVDTAK 294
           L D+  + G ++ A+
Sbjct: 360 LADLLGRAGLLEEAE 374



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 21/189 (11%)

Query: 36  IGSLKNCKTLNELKQP---HCHILKQGLGHKP------SYISKVVCTCAQMGTFESLTYA 86
           +  LK C  L  L++    H  +  + LG +P      + +  + C C  M         
Sbjct: 219 VSVLKTCAHLGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNE------- 271

Query: 87  QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
                +++ D   S  + ++N++I G +  G G  A+ L+  +   G +P++ TF   L 
Sbjct: 272 ----AWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALC 327

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVV 205
           AC  +    EG  V  ++   G +       CL +  G  G + +   V  +M  E +  
Sbjct: 328 ACIHTGRVDEGEDVFRSMRDHGIEPRREHYGCLADLLGRAGLLEEAEGVLLDMPMEPHAS 387

Query: 206 SWTSLICAC 214
            W +L+ +C
Sbjct: 388 QWGALMSSC 396


>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
          Length = 648

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/525 (39%), Positives = 322/525 (61%), Gaps = 2/525 (0%)

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
           +P+ +T   +I ACA+LQ    G  V  ++ +LG  A+  +VNA +  +   G +  A++
Sbjct: 118 RPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARR 177

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP--RPDRVTMLSAVSASAQL 353
           LF E   R++V  NT++  YVR GL REAL +   +   G   RPD VT++ AVS  AQ+
Sbjct: 178 LFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQM 237

Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
           GDL  G+  H +V   G+     + N ++DMY+KCG  E+A  +F+ +SN+T VSW ++I
Sbjct: 238 GDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMI 297

Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
            G  + G +E AR +F EMP RD   WN ++ G  Q    +EA+ LF  M   ++  + +
Sbjct: 298 VGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEI 357

Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
           TMV + SAC  LGAL++  W++ YI+++ +H  + L T+LVDM+A+CG+ ++A+ VF  +
Sbjct: 358 TMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEI 417

Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
             ++   WT+ I  +A  G+ ++A+E F  M+  G++PD I F+GVL+AC H GLV  G 
Sbjct: 418 PVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGR 477

Query: 594 HLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQK 653
             F  M   + +  ++ HY CM+DLLGRAG L EA  L+ +MP++P+ V+WG+L  AC+ 
Sbjct: 478 QFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRM 537

Query: 654 HQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS 713
           H N+ +   AA ++ ELDP  SG++VLL+N+YA A       +VR+ M+  G+ K+PG S
Sbjct: 538 HGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCS 597

Query: 714 SIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
            IE+NG VHEF   D+SH + N I   L E+  ++R    + D++
Sbjct: 598 CIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMRHIANLIDIS 642



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 242/497 (48%), Gaps = 74/497 (14%)

Query: 104 FMYNSLIRGYSCIG----LGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGV 158
           F YN+  R  S       +    + LY  L   G   PD  TFPF++ AC +      G 
Sbjct: 82  FPYNAAFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGA 141

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            V G + K+GF  DVFV N  ++F+   G +   RR+FDE   R+VVSW +LI    R  
Sbjct: 142 AVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSG 201

Query: 219 LPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
           LP+EA+ LF+ + E+G  ++P+ VT++  +S CA++ +LELG R+  ++D  G++    +
Sbjct: 202 LPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRL 261

Query: 277 VNALVDMYMKCGAV-------------------------------DTAKQLFGECKDRNL 305
           +NA++DMY+KCG++                               + A+ LF E  +R++
Sbjct: 262 MNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDV 321

Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
              N +M+ YV+    +EA+A+  EM      P+ +TM++ +SA +QLG L  G   H Y
Sbjct: 322 FPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHY 381

Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
           + R+ L    ++  +++DMY KCG  + A  +F+ +  +  ++W S+I GL  +G     
Sbjct: 382 IDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHA--- 438

Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
                                       +EA+E F+ M+   ++ D +T +GV SAC + 
Sbjct: 439 ----------------------------DEAIEYFQRMIDLGLQPDEITFIGVLSACCHA 470

Query: 486 GALDLAKWIYAYIE-KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTA 543
           G ++  +  ++ +  K  +   M+  + ++D+  R G    A Q+   M    D   W A
Sbjct: 471 GLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGA 530

Query: 544 AIGAMAMEGN---GEQA 557
              A  M GN   GE+A
Sbjct: 531 LFFACRMHGNITLGEKA 547



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 204/460 (44%), Gaps = 57/460 (12%)

Query: 89  AFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA--GFGILPDKFTFPFVLN 146
           AF   + D      +  +N+LI GY   GL  EA+ L+  LA  G  + PD+ T    ++
Sbjct: 173 AFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVS 232

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV---------------- 190
            C +      G ++H  +   G    V + N +++ Y +CG +                 
Sbjct: 233 GCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVS 292

Query: 191 ---------------DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGI 235
                          D R +FDEM ER+V  W +L+    +    KEA+ LF EM +  +
Sbjct: 293 WTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKV 352

Query: 236 KPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
            PN +TMV ++SAC++L  LE+G  V  YID   +  +  +  +LVDMY KCG +  A  
Sbjct: 353 DPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAIC 412

Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
           +F E   +N +   +++      G A EA+     M+  G +PD +T +  +SA    G 
Sbjct: 413 VFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGL 472

Query: 356 LLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSW 409
           +  GR     M   Y L   ++ +    + MID+  + G  + A ++ + M  +   V W
Sbjct: 473 VEAGRQFFSLMHAKYHLERKMKHY----SCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVW 528

Query: 410 NSLIAGLIKNGDV---ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
            +L      +G++   E A     E+   D   +  +     + NM ++A +  RVM+  
Sbjct: 529 GALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKA-DKVRVMM-R 586

Query: 467 RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
            + V++V       +C     ++L   ++ +I K+  H D
Sbjct: 587 HLGVEKVP----GCSC-----IELNGVVHEFIVKDKSHLD 617


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/643 (36%), Positives = 353/643 (54%), Gaps = 32/643 (4%)

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R VV+WT+LI    +      A+  F +M  E IKPN  T  C   A   L     G ++
Sbjct: 21  RCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQI 80

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
            A   +LG   +  +  +  DMY K G    A++LF E   RN+ + N  +SN V  G  
Sbjct: 81  HAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRP 140

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            +A+    E    G  PD +T  + ++A A    L  GR  HG V+R+G EG  S+ N +
Sbjct: 141 GKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGI 200

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           ID+Y KC + E+A  +F+ M  +  VSW +++A   +N + E A  VF  + GR      
Sbjct: 201 IDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVF--LMGR------ 252

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                       +E +EL   M+S            V SA   +  L+  + ++A   K 
Sbjct: 253 ------------KEGIELTDYMVSS-----------VISAYAGISGLEFGRSVHALAVKA 289

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +  D+ + +ALVDM+ +CG  +   QVF  M +R++ +W A I   A +G+ + A+ LF
Sbjct: 290 CVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLF 349

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
            EM  + +  + +  + VL+ACS GG V  G  +F SM D + + P   HY C+ D+LGR
Sbjct: 350 EEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGR 408

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG++  A + ++ MP+ P   +WG+LL AC+ +   ++   AA+ + +LDP+ SG HVLL
Sbjct: 409 AGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLL 468

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SN++A+AG+W     VR +MK+ GI+K  G S +    KVH F + D SH   + I +ML
Sbjct: 469 SNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAML 528

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
            ++   ++ AGY+PD    L D++E+EK   + +HSEK+A+AFGLI+    +PIR+ KNL
Sbjct: 529 VKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNL 588

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCHS  K +S +  REIIVRDNNRFH FR   CSC DFW
Sbjct: 589 RICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 200/452 (44%), Gaps = 34/452 (7%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + +LI G    G    A+  + ++    I P+ FTFP    A T       G Q+H   +
Sbjct: 26  WTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHAIAL 85

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K+G   D FV     + Y + G   + +R+FDEM  RNV  W + I        P +A+ 
Sbjct: 86  KLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAID 145

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F E    G +P+ +T    ++ACA  + L+LG ++   +   G + +  + N ++D+Y 
Sbjct: 146 KFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYG 205

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KC  V+ A+ +F     RN V   T+++   +     +A  +       G       + S
Sbjct: 206 KCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSS 265

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            +SA A +  L  GR  H   ++  +EG   + + ++DMY KCG  E   ++F  M  + 
Sbjct: 266 VISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERN 325

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           +VSWN++I+G    GDV+                                AM LF  M S
Sbjct: 326 LVSWNAMISGYAHQGDVDM-------------------------------AMTLFEEMQS 354

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQ 524
           E +  + VT++ V SAC   GA+ L   I+  + ++  I    +    + DM  R G  +
Sbjct: 355 EAV-ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVE 413

Query: 525 RAMQVFRRMEKR-DVSAWTAAIGAMAMEGNGE 555
           RA +  ++M  R  +S W A + A  + G  E
Sbjct: 414 RAYEFVQKMPIRPTISVWGALLNACRVYGEPE 445



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 176/361 (48%), Gaps = 17/361 (4%)

Query: 70  VVCTCAQMGTFESLTY-AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVE 128
           V C+   M +   L + AQ+ FD     N      ++ N+++ G        +AI  ++E
Sbjct: 95  VGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPG-----KAIDKFIE 149

Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
               G  PD  TF   LNAC  +     G Q+HG +++ GF+ DV V N +I+ YG+C +
Sbjct: 150 FRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKE 209

Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
           +     VF+ M  RN VSW +++ AC + D  ++A  +F    +EGI+     +  VISA
Sbjct: 210 VELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISA 269

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
            A +  LE G  V A   +  ++ +  + +ALVDMY KCG+++  +Q+F E  +RNLV  
Sbjct: 270 YAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSW 329

Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA-----SAQLGDLLCGRMCH 363
           N ++S Y   G    A+ + +EM       + VT++  +SA     + +LG+ +   M  
Sbjct: 330 NAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESMRD 388

Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDV 422
            Y +  G E +  I     DM  + G  E A      M  +  +S W +L+      G+ 
Sbjct: 389 RYRIEPGAEHYACIA----DMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEP 444

Query: 423 E 423
           E
Sbjct: 445 E 445



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 158/384 (41%), Gaps = 45/384 (11%)

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
           MY K    + A+ L      R +V    ++S  V+ G    AL    +M     +P+  T
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
              A  AS  L     G+  H   L+ G      +  +  DMY K G +  A R+FD M 
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            + V  WN+ I+  + +G    A + F E                            FR 
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIE----------------------------FRR 152

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
           +  E    D +T     +AC     LDL + ++  + ++G   D+ +A  ++D++ +C +
Sbjct: 153 VGGEP---DLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKE 209

Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
            + A  VF  M +R+  +W   + A       E+A  +F    ++GI+    +   V++A
Sbjct: 210 VELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISA 269

Query: 583 CSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG------CMVDLLGRAGLLGEALDLIKSMP 636
             + G+   G    RS   +H ++ +    G       +VD+ G+ G + +   +   MP
Sbjct: 270 --YAGI--SGLEFGRS---VHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMP 322

Query: 637 VEPNDVIWGSLLAACQKHQNVDIA 660
            E N V W ++++      +VD+A
Sbjct: 323 -ERNLVSWNAMISGYAHQGDVDMA 345


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/666 (36%), Positives = 372/666 (55%), Gaps = 39/666 (5%)

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           +I  Y     + D  ++FD MS R+VVSW S+I  C        A  LF EM E+    N
Sbjct: 49  MIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEK----N 104

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            ++   +++   K   +EL  R+  ++D + +K  A   NA+V  Y + G V+   +LF 
Sbjct: 105 VISWTTMVNGYLKFGRVELAQRL--FLD-MHVKDVAAW-NAMVHGYFENGRVEEGVRLFE 160

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           E   R+++   +++      G + EAL +  +ML  G  P   T    +SA A   +   
Sbjct: 161 EMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNL 220

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           G   HG+V++ G    + I  ++I  Y  C K E A +IF+    K VV W +L+   + 
Sbjct: 221 GVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVW 280

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           N   + A  VF +M         T +G L  ++ F   ++                    
Sbjct: 281 NNKHQDALRVFGDM---------TKMGALPNQSTFSITLK-------------------- 311

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC  L ALD  K I+    K G+  D+ +  +LV M+  CG+   A+ VFR + ++D+
Sbjct: 312 --ACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDI 369

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
            +W + I   A  G G  A+  FN+M+R+G+ P+ I F G+L+ACS  G++ +G   F  
Sbjct: 370 VSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEY 429

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           ++       +  HY CMVD+LGR G L EA +L++ MPV+ N +IW +LL+AC+ H N++
Sbjct: 430 ISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLE 489

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +A  AA+ I +L+P  S  +VLLSNIYASAG+W +V+R+R++MK+ G+ K PGSS + + 
Sbjct: 490 VAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLR 549

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
           GK HEF S D SHP    I   L  +  +L++ GYVPD    L DV++++K+ +LS HSE
Sbjct: 550 GKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSE 609

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           +LA+AFGL+ST +   I V+KNLR+C DCHS  KL+SK+  R+I+VRD+ RFH F+ G C
Sbjct: 610 RLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGIC 669

Query: 839 SCSDFW 844
           SCSD+W
Sbjct: 670 SCSDYW 675



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 213/457 (46%), Gaps = 47/457 (10%)

Query: 106 YNSLIRG-YSCIGLGVEAISLYVELAGFGILPDK--FTFPFVLNACTKSSAFGEGVQVHG 162
           +NS+I+G   C  LG+ A  L+ E+      P+K   ++  ++N   K   FG       
Sbjct: 77  WNSMIKGCLDCGNLGM-ATRLFDEM------PEKNVISWTTMVNGYLK---FGRVELAQR 126

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
             + M   +DV   N +++ Y E G + +G R+F+EM  R+V+SWTS+I         +E
Sbjct: 127 LFLDMHV-KDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEE 185

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+++F +M+  G++P   T  CV+SACA      LG +V  ++ +LG   +  +  +L+ 
Sbjct: 186 ALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLIT 245

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
            Y  C  ++ A ++F E   +N+V    +++ YV     ++AL +  +M   G  P++ T
Sbjct: 246 FYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQST 305

Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
               + A   L  L  G+  H   ++ GLE    + N+++ MY +CG    A  +F +++
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN 365

Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
            K +VSWNS+I G        SA+  F                GL        A+  F  
Sbjct: 366 EKDIVSWNSIIVG--------SAQHGF----------------GLW-------ALIFFNQ 394

Query: 463 MLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCG 521
           M+   +  + +T  G+ SAC   G L   +  + YI +   +    Q    +VD+  RCG
Sbjct: 395 MIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCG 454

Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
               A ++ R M  K +   W A + A  +  N E A
Sbjct: 455 KLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVA 491



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 172/371 (46%), Gaps = 10/371 (2%)

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           ++K   +D A+ +F +    NL L   +++ Y R     +AL + D M +     D V+ 
Sbjct: 22  HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR----DVVSW 77

Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
            S +      G+L         +    +  W     TM++ Y+K G+ E+A R+F  M  
Sbjct: 78  NSMIKGCLDCGNLGMATRLFDEMPEKNVISW----TTMVNGYLKFGRVELAQRLFLDMHV 133

Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           K V +WN+++ G  +NG VE    +F EMP RD ISW +M+GGL      EEA+ +F+ M
Sbjct: 134 KDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKM 193

Query: 464 LSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDP 523
           L   ++    T   V SAC      +L   ++ ++ K G      ++ +L+  +A C   
Sbjct: 194 LRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKI 253

Query: 524 QRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
           + A ++F     ++V  WTA + A       + A+ +F +M + G  P+   F   L AC
Sbjct: 254 EHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKAC 313

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
                +++G  +  +M    G+   +     +V +    G +  A+ + +++  E + V 
Sbjct: 314 CGLEALDKGKEI-HTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDIVS 371

Query: 644 WGSLLAACQKH 654
           W S++    +H
Sbjct: 372 WNSIIVGSAQH 382



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 50/250 (20%)

Query: 25  KAKTTPKDSPSIGSLKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFE 81
           K    P  S    +LK C   + L++ K+ H   +K GL       + +V    + G   
Sbjct: 296 KMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVN 355

Query: 82  SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
           S     +        N     +  +NS+I G +  G G+ A+  + ++   G+ P++ TF
Sbjct: 356 SAVAVFR--------NINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITF 407

Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN---CLINFYGECGDIVDGRRVFDE 198
             +L+AC++S    +G      I +  +  +V       C+++  G CG +       DE
Sbjct: 408 TGLLSACSRSGMLLKGRCFFEYISR--YKSNVLRPQHYACMVDILGRCGKL-------DE 458

Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
             E               R +P              +K NS+  + ++SAC    NLE+ 
Sbjct: 459 AEE-------------LVRYMP--------------VKANSMIWLALLSACRVHSNLEVA 491

Query: 259 DRVCAYIDEL 268
           +R   +I +L
Sbjct: 492 ERAAKHILDL 501


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/631 (35%), Positives = 350/631 (55%), Gaps = 62/631 (9%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++ +C    +L LG ++ + I   G  ++  + N L+++Y KCG +DTA  LFG    +N
Sbjct: 58  LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKN 117

Query: 305 LVLCNTIMSNYVRLG-------------------------------LAREALAILDEMLL 333
           ++ CN +++ Y R G                                  E L +   M  
Sbjct: 118 IMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNE 177

Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
            G  PD   + S +   A L  L+ GR  HGYV + G E    + +++  MYMKCG    
Sbjct: 178 LGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCG---- 233

Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
                            SL  G            +   MP ++ ++WNT++ G  Q    
Sbjct: 234 -----------------SLGEG----------ERLIRAMPSQNVVAWNTLIAGRAQNGYP 266

Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
           EE ++ + +M     + D++T V V S+C  L  L   + I+A + K G    + + ++L
Sbjct: 267 EEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSL 326

Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
           + M++RCG  + +++VF   E  DV  W++ I A    G G +A++LFN+M ++ ++ + 
Sbjct: 327 ISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEAND 386

Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
           + F+ +L ACSH GL  +G   F  M + +GV P++ HY CMVDLLGR G + EA  LI+
Sbjct: 387 VTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIR 446

Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
           SMPV+ + + W +LL+AC+ H+  ++A   +E +  LDP     +VLLSNI+AS  +W +
Sbjct: 447 SMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDD 506

Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
           V+ VR  M+++ ++K PG S +EV  ++H+F  GD+SHP+   I+S LRE+   ++  GY
Sbjct: 507 VSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGY 566

Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           VPD+ +VL D+D ++K+Y L HHSEKLA+AF L+ T    PIRV+KNLR+C DCH   K 
Sbjct: 567 VPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKY 626

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +S++ +REIIVRD++RFH F+ G CSC D+W
Sbjct: 627 ISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 212/459 (46%), Gaps = 64/459 (13%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG------------- 187
           F  +L +C   ++   G Q+H  I+  G   D F+ N L+N Y +CG             
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 188 ------------------DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
                             D V  R++FDEM ERNV +W +++    + +  +E + LF  
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M E G  P+   +  V+  CA L+ L  G +V  Y+ + G + N ++V++L  MYMKCG+
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
           +   ++L      +N+V  NT+++   + G   E L   + M + G RPD++T +S +S+
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294

Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
            ++L  L  G+  H  V++ G     S+ +++I MY +CG  E + ++F    N  VV W
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
           +S+IA    +G     R V                          EA++LF  M  E+++
Sbjct: 355 SSMIAAYGFHG-----RGV--------------------------EAIDLFNQMEQEKLE 383

Query: 470 VDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
            + VT + +  AC + G  +   K+    +EK G+   ++  T +VD+  R G  + A  
Sbjct: 384 ANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEA 443

Query: 529 VFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
           + R M  K DV  W   + A  +    E A  +  E+ R
Sbjct: 444 LIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFR 482


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/784 (30%), Positives = 404/784 (51%), Gaps = 44/784 (5%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF--- 80
           H+A   P        L +C       Q     L    G+K  + S++    A +  +   
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGR---LIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 81  ESLTYAQKAF-DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
            S   A++ F D   +D  T      +N+LI G++  G G  A+ ++ E+   G+ PD  
Sbjct: 192 GSFRLAERVFCDMPHRDTVT------FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCV 245

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T   +L AC       +G Q+H  + K G   D  +E  L++ Y +CGD+     +F+  
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              NVV W  ++ A  + +   ++  LF +M   GI+PN  T  C++  C   + ++LG+
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ +   + G +++  +   L+DMY K G ++ A+++    K++++V   ++++ YV+  
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
             ++ALA   EM   G  PD + + SA+S  A +  +  G   H  +  +G  G  SI N
Sbjct: 426 CCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWN 485

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
            ++++Y +C                               G +  A   F EM  +D I+
Sbjct: 486 ALVNLYARC-------------------------------GRIREAFSSFEEMELKDGIT 514

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
            N ++ G  Q  + EEA+++F  M    +K +  T V   SA   L  +   K I+A + 
Sbjct: 515 GNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVI 574

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G   + ++  AL+ ++ +CG  + A   F  M +R+  +W   I + +  G G +A++
Sbjct: 575 KTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALD 634

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
           LF++M ++GIKP+ + F+GVL ACSH GLV +G   F+SM+D +G+ P+  HY C++D+ 
Sbjct: 635 LFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIF 694

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
           GRAG L  A   I+ MP+  + ++W +LL+AC+ H+N+++  +AA+ + EL+P  S  +V
Sbjct: 695 GRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYV 754

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
           LLSN YA   KW N  +VR  M+++G+RK PG S IEV   VH F  GD  HP    I +
Sbjct: 755 LLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYN 814

Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
            L  +N R+   GY  +  ++  D +++ +      HSEKLA+ FGL+S    MP+RV+K
Sbjct: 815 FLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIK 874

Query: 800 NLRL 803
           NLR+
Sbjct: 875 NLRV 878



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 267/548 (48%), Gaps = 35/548 (6%)

Query: 108 SLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
           +++ GY+  GLG EA+ LY ++   G++P  +    VL++CTK+  F +G  +H    K 
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKH 172

Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
           GF  ++FV N +I  Y  CG      RVF +M  R+ V++ +LI   A+    + A+ +F
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232

Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
            EM   G+ P+ VT+  +++ACA L +L+ G ++ +Y+ + G+ ++ +M  +L+D+Y+KC
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC 292

Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
           G V+TA  +F      N+VL N ++  + ++    ++  +  +M   G RP++ T    +
Sbjct: 293 GDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352

Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
                  ++  G   H   ++ G E    +   +IDMY K G  E A R+ + +  K VV
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412

Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
           SW S+IAG +                               Q    ++A+  F+ M    
Sbjct: 413 SWTSMIAGYV-------------------------------QHECCKDALAAFKEMQKCG 441

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           I  D + +    S C  + A+     I+A I  +G   D+ +  ALV+++ARCG  + A 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
             F  ME +D       +   A  G  E+A+++F  M + G+K +   FV  L+A ++  
Sbjct: 502 SSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 588 LVNQGWHLF-RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
            + QG  +  R +   H    ++ +   ++ L G+ G   +A      M  E N+V W +
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNT 618

Query: 647 LLAACQKH 654
           ++ +C +H
Sbjct: 619 IITSCSQH 626



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 267/578 (46%), Gaps = 40/578 (6%)

Query: 141 FPFVLNACTKSSAFGEGV-QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           F   L AC  +    + V ++H   V  G  +   V N LI+ Y + G ++  RRVF+E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
           S R+ VSW +++   A+  L +EA+ L+ +M   G+ P    +  V+S+C K +    G 
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
            + A   + G  +   + NA++ +Y++CG+   A+++F +   R+ V  NT++S + + G
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
               AL I +EM   G  PD VT+ S ++A A LGDL  G   H Y+ + G+     +  
Sbjct: 224 HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEG 283

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
           +++D+Y+KCG  E A  IF+      VV WN                             
Sbjct: 284 SLLDLYVKCGDVETALVIFNSSDRTNVVLWN----------------------------- 314

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
              ML    Q N   ++ ELF  M +  I+ ++ T   +   C     +DL + I++   
Sbjct: 315 --LMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G   DM ++  L+DM+++ G  ++A +V   ++++DV +WT+ I         + A+ 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432

Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
            F EM + GI PD+I     ++ C+    + QG  +   +  + G S  +  +  +V+L 
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLY 491

Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
            R G + EA    + M  E  D I G+ L +      +   A       +    K  V  
Sbjct: 492 ARCGRIREAFSSFEEM--ELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFT 549

Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
            +S + ASA    N+A ++ Q K+   R +    S E 
Sbjct: 550 FVSALSASA----NLAEIK-QGKQIHARVIKTGHSFET 582


>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/721 (33%), Positives = 381/721 (52%), Gaps = 93/721 (12%)

Query: 18  TTLTNQHKAKTTPKDSPSIGSLKNC----------KTLNELKQPHCHILKQGLGHKPSYI 67
             L+N +  K   K    I ++  C          ++LN+ K  H H +  GL H P++I
Sbjct: 58  NNLSNSNTTKALSKSKSLIANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFI 117

Query: 68  --------SKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLG 119
                   S   C C  +        A+K FD     + +  +LF++N++I+ Y   G  
Sbjct: 118 HLPSHLAVSYAFCGCVPL--------ARKLFD-----DLSDPSLFLWNAIIKMYVDKGFH 164

Query: 120 VEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENC 178
            +A+ ++  +   G   PDK+TFP V+ AC+  S    GV +HG  +  GF  ++FV+N 
Sbjct: 165 FDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNS 224

Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPN 238
           L+  Y  CG +   R+VF+ M +R+VVSW ++I    +   P+EA+ +F  M++  ++P+
Sbjct: 225 LLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPD 284

Query: 239 SVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
           S T+V  + +C  L+ LELG +V   + +  ++    + NALVDMY +CG +D A  +F 
Sbjct: 285 SATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFA 344

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           E K+++++   ++++ Y+  G A+ ALA+   M L G  P+ VT+ S +SA        C
Sbjct: 345 ETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSA--------C 396

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
             +C+                    MY KC     + ++F   S K  V WN+L++GLI 
Sbjct: 397 ASLCY--------------------MYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIH 436

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           N   E AR                            EA+ LF+ ML E ++ +  T   V
Sbjct: 437 N---ELAR----------------------------EAVGLFKSMLIEEVEANHATFNSV 465

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM--EKR 536
             A   L  L     +++Y+ ++G    + + T L+DM+++CG    A ++F  +  +++
Sbjct: 466 IPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEK 525

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           D+  W+  I    M G+GE AV LFN+M+  G++P+ I F  VL ACSH GLV+ G  LF
Sbjct: 526 DIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLF 585

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
           + M + +  SP   HY C+VDLLGRAG L EA DLIKSMP + N  IWG+LL AC  HQN
Sbjct: 586 KYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQN 645

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
           V++   AAER+ EL+PE +G ++LL+NIYA+ G+W +   VR  M + G+RK P  SS+ 
Sbjct: 646 VELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSVG 705

Query: 717 V 717
           V
Sbjct: 706 V 706


>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
 gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
 gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
          Length = 604

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/563 (40%), Positives = 332/563 (58%), Gaps = 36/563 (6%)

Query: 287 CGAVDT-AKQLFGECKDRNLVLCNTIM---SNYVRLGLAREALAILDEMLLHG-PRPDRV 341
           CGA  + A+ LF +  +      N+++   S+      A + + +   ML  G P P+  
Sbjct: 73  CGAAPSYARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSF 132

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           T+  A+ A + +  L  GR  H    R GLE    +   ++++Y KC +  +A  +FD M
Sbjct: 133 TLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGM 192

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
                             GD             ++  +W+ M+GG ++  M  EA+ LFR
Sbjct: 193 V-----------------GD-------------KNLAAWSAMIGGYSRVGMVNEALGLFR 222

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
            M +  +  D VTMV V SAC   GALDL +W++A+I++ GI  D++L+TAL+DM+A+CG
Sbjct: 223 EMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCG 282

Query: 522 DPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLT 581
             +RA  VF  M +RD  AW+A I  +A+ G  E A++LF+ ML   ++P+++ F+GVL+
Sbjct: 283 LIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLS 342

Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
           AC+H GLVN+G   + +M ++ G+ P + +YGCMVDL  R+ LL EA   +  M + PN 
Sbjct: 343 ACAHSGLVNEGRRYWSTMQEL-GIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNS 401

Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
           VIW +LL A +     DI   A++++ EL+P     +VLLSN+YAS  +W  V+ +R +M
Sbjct: 402 VIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKM 461

Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
           KE  +  + G SSIE+NG +H+F   D+SHPE+  I  +LRE+  R+  AG+ P    VL
Sbjct: 462 KENNVNVVAGCSSIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHKPWTAAVL 521

Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
            DV E+EK+  L  HSE+LA+A+GL+ T     IRVVKNLR C DCH  AK+VSK YDRE
Sbjct: 522 HDVGEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVAKIVSKSYDRE 581

Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
           IIVRD  RFH F +GSCSC DFW
Sbjct: 582 IIVRDRVRFHRFVEGSCSCKDFW 604



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 165/338 (48%), Gaps = 11/338 (3%)

Query: 84  TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV---EAISLYVELAGFG-ILPDKF 139
           +YA+  FD          T F YNSLIR  S         + + +Y  +   G  LP+ F
Sbjct: 78  SYARNLFDQI-----PEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSF 132

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T  F L AC+   A GEG Q+H    + G +   +V+  L+N Y +C ++   R VFD M
Sbjct: 133 TLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGM 192

Query: 200 -SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
             ++N+ +W+++I   +R  +  EA+ LF EM    + P+ VTMV VISACAK   L+LG
Sbjct: 193 VGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLG 252

Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL 318
             V A+ID  G+  +  +  AL+DMY KCG ++ AK +F    +R+    + ++      
Sbjct: 253 RWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIH 312

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           GL   AL +   ML    RP+ VT +  +SA A  G +  GR     +   G++      
Sbjct: 313 GLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSMENY 372

Query: 379 NTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
             M+D++ +    + A      M+     V W +L+  
Sbjct: 373 GCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVA 410



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 160/325 (49%), Gaps = 16/325 (4%)

Query: 38  SLKNCK---TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           +LK C     L E +Q H    ++GL   P   + ++   A+    E +  A+  FD  +
Sbjct: 137 ALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKC---EEVALARTVFDGMV 193

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
            D   +A    ++++I GYS +G+  EA+ L+ E+    + PD+ T   V++AC K+ A 
Sbjct: 194 GDKNLAA----WSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGAL 249

Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
             G  VH  I + G   D+ +   LI+ Y +CG I   + VFD M+ER+  +W+++I   
Sbjct: 250 DLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGL 309

Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
           A   L + A+ LF  M+E  ++PN+VT + V+SACA    +  G R  + + ELG+K + 
Sbjct: 310 AIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSM 369

Query: 275 LMVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIM---SNYVRLGLAREALAILDE 330
                +VD++ +   +D A     G     N V+  T++    N  R  + + A   L E
Sbjct: 370 ENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLE 429

Query: 331 MLLHGPRPDRVTMLSAVSASAQLGD 355
             L    P+   +LS + AS    D
Sbjct: 430 --LEPCNPENYVLLSNLYASNSQWD 452


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/606 (37%), Positives = 350/606 (57%), Gaps = 33/606 (5%)

Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
           T V ++  CA  + L  G RV + + + G  ++ L+ N L++MY KCG +  A+ +F + 
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 301 KDRN--LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           +++N  ++  N I+  Y + GL +EAL +   M L G   ++VT+++A+ A A L     
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
           GR+ H   +   LE    +  ++++M+ KC                             K
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKC-----------------------------K 176

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           N  V++AR VF  +P ++ ++WN M+   +Q    ++A+++FR M  E ++ D VT + +
Sbjct: 177 N--VDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTI 234

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC  L A    + ++  I  +GI  D+ L TA++  + +CG    A  +F  + K++ 
Sbjct: 235 IDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNT 294

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
             W+A + A A  G   +A+EL++EM++ G++ + I F+G+L ACSH G    G   F S
Sbjct: 295 VTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVS 354

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           M    GV P   HY  ++DLLGR+G L  + DLI SMP EP+   W +LL AC+ H +VD
Sbjct: 355 MIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVD 414

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
             A  AE I ELDPE SG ++LLSN+Y+S G+     R R  M+ +GI K PG SSIEV 
Sbjct: 415 RGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVK 474

Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
            +VHEF +  + HP++  I + +  +  R+++AGYV D+  VL DV+E+EK+ LL +HSE
Sbjct: 475 DRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSE 534

Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
           +LA+AFGLIST     + +VKNLR+C DCH+  K +SKV  R+I+VRD  RFH F  G+C
Sbjct: 535 RLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGAC 594

Query: 839 SCSDFW 844
           SC D+W
Sbjct: 595 SCGDYW 600



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 218/432 (50%), Gaps = 38/432 (8%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  +L  C  S A  EG +VH  +VK G+  D  + N LI  YG+CG I + R VFD++
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 200 SERN--VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
            E+N  V+SW  +I A  +  L KEA++LF  M  EG+  N VT++  I ACA L + E 
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
           G  V A   +  ++++ ++  +LV+M+ KC  VD A+ +F     +NLV  N +++ Y +
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI 377
               ++A+ +   M L G +PD VT L+ + A A L     GRM H  +  +G+    ++
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265

Query: 378 CNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
              ++  Y KCG+ + A  IFD +  K  V+W++++A   +NG                 
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNG----------------- 308

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWIYA 496
             + T            EA+EL+  M+   ++V+ +T +G+  AC + G ++D   +  +
Sbjct: 309 --YET------------EAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVS 354

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN-- 553
            I   G+    +    L+D+  R G  Q +  +   M  + D SAW A +GA  M G+  
Sbjct: 355 MIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVD 414

Query: 554 -GEQAVELFNEM 564
            G +  EL  E+
Sbjct: 415 RGARIAELIYEL 426



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 188/412 (45%), Gaps = 40/412 (9%)

Query: 39  LKNC---KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
           LK C   K L E K+ H  ++K G        + ++    + G    +  A+  FD   +
Sbjct: 31  LKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCG---GIAEARSVFD---Q 84

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
             E +A +  +N +I  Y+  GLG EA+ L+  +   G++ ++ T    ++AC    +  
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
           EG  VH   V    + D  V   L+N +G+C ++   R VFD +  +N+V+W +++   +
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +    K+A+ +F  M  EG++P++VT + +I ACA L     G  V   I   G+  +  
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVA 264

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           +  A++  Y KCG +D A+ +F     +N V  + I++ Y + G   EA+ +  EM+  G
Sbjct: 265 LGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGG 324

Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
              + +T L  + A +  G  + G                      +D ++   +     
Sbjct: 325 LEVNGITFLGLLFACSHAGRSMDG----------------------VDYFVSMIRDFGVV 362

Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGG 446
            +F+H  N        LI  L ++G ++ + ++ + MP   D  +W  +LG 
Sbjct: 363 PVFEHYLN--------LIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGA 406


>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 207/536 (38%), Positives = 319/536 (59%), Gaps = 32/536 (5%)

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
           T++  YV       AL   +EM+  G  PD  T    + A  +L  +  G+  HG+V + 
Sbjct: 103 TMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKL 162

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
           GLE    + N++I+MY +CG+ E++                                 VF
Sbjct: 163 GLEADVFVQNSLINMYGRCGEMELS-------------------------------STVF 191

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGAL 488
            ++  +   SW++M        M+ E + LFR M  E  +K +   MV   SAC   GAL
Sbjct: 192 EKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGAL 251

Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAM 548
           +L   I+ ++ +N    ++ + T+LVDM+ +CG    A+ +F++MEKR+   ++A I   
Sbjct: 252 NLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGF 311

Query: 549 AMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQ 608
           A+ G GE A+ +F+EM+++G++PD +V+V +L ACSH GLV +G  +F  M     V P 
Sbjct: 312 ALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPT 371

Query: 609 IVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERIT 668
             HYGC+VDLLGRAGLL EAL+ I+S+P+E NDV+W S L+ C+ HQN+++   AA+ + 
Sbjct: 372 AEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELL 431

Query: 669 ELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGD 728
           +L     G ++L+SN+Y+ A  W +VAR R ++  +G+++ PG S+++V GK H F S D
Sbjct: 432 KLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQD 491

Query: 729 ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS 788
            SHP+   I  ML +M  +L+  GY PDLT +LL+VDE+EKK  L  HS+K+A+AF L+ 
Sbjct: 492 RSHPQCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFALLY 551

Query: 789 TSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           T     I++ +NLR+C DCH++ K +S +Y+REI+VRD NRFH F+ G+CSC D+W
Sbjct: 552 TPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 607



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 209/426 (49%), Gaps = 18/426 (4%)

Query: 11  VLATPTV--TTLTNQHKAKTTP-------KDSPSIGSLKNCKTLNELKQPHCHILKQGLG 61
           ++ TPT+  + L ++      P       K+   +  LK C  ++E KQ H   +K  L 
Sbjct: 1   MIKTPTILQSLLASRDDFTHNPEVNNCGGKEQECLYLLKRCNNIDEFKQVHARFIKLSLF 60

Query: 62  HKPSYISK-VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
              S+ +  V+  CA  G   S+ YA   F   I D  T    F + ++IRGY       
Sbjct: 61  CSSSFSASSVLAKCAHSGWENSMNYAASIFRG-IDDPCT----FDFKTMIRGYVNEMSFE 115

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
            A+  Y E+   GI PD FT+P +L ACT+  A  EG Q+HG + K+G + DVFV+N LI
Sbjct: 116 VALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKLGLEADVFVQNSLI 175

Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNS 239
           N YG CG++     VF+++  ++  SW+S+  AC    +  E + LF EM  E  +K   
Sbjct: 176 NMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEE 235

Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
             MV  +SACA    L LG  +  ++     + N ++  +LVDMY+KCG +D A  +F +
Sbjct: 236 SGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQK 295

Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
            + RN +  + ++S +   G    AL +  EM+  G  PD V  +S ++A +  G +  G
Sbjct: 296 MEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEG 355

Query: 360 RMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLI 417
           R   G +L+ G +E        ++D+  + G  E A      +   +  V W S ++   
Sbjct: 356 RRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCR 415

Query: 418 KNGDVE 423
            + ++E
Sbjct: 416 VHQNIE 421



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 138/273 (50%), Gaps = 14/273 (5%)

Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
           + TM+ G   E  FE A+  +  M+   I+ D  T   +  AC  L A+   K I+ ++ 
Sbjct: 101 FKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVF 160

Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
           K G+  D+ +  +L++M+ RCG+ + +  VF ++E +  ++W++   A    G   + + 
Sbjct: 161 KLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLM 220

Query: 560 LFNEMLRQ-GIKPDSIVFVGVLTACSHGGLVNQGW----HLFRSMTDIHGVSPQIVHYGC 614
           LF EM R+  +K +    V  L+AC++ G +N G      L R++++++     I+    
Sbjct: 221 LFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELN-----IIVKTS 275

Query: 615 MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYA-AERITE-LDP 672
           +VD+  + G +  AL + + M  + N++ + ++++    H   + A    +E I E L+P
Sbjct: 276 LVDMYVKCGCIDNALHIFQKME-KRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEP 334

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
           +   V+V L N  + +G      RV  +M ++G
Sbjct: 335 DHV-VYVSLLNACSHSGLVKEGRRVFGEMLKEG 366


>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/537 (39%), Positives = 316/537 (58%), Gaps = 31/537 (5%)

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
           CN+++  Y+ L     +L I   M      PD  T  + + A+AQL D   G+M HG V+
Sbjct: 57  CNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           + G      IC    D+Y       + C         T +S             +  A +
Sbjct: 117 QMGF-----IC----DVYTSTALVHLYC---------TCLS-------------ISDASQ 145

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +F EMP R+ ++WN ++ G T    F +A++ FR ML++  +    T+V V SAC +LGA
Sbjct: 146 LFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGA 205

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            +  KWI+ +I  N +  ++ + TAL+DM+A+CG      +VF  + +++V  W   I  
Sbjct: 206 FNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISG 265

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            AM G G+ A++ F+ ML +  KPD + F+GVL AC H GLV +G   F SM    G+ P
Sbjct: 266 YAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQP 325

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
           +I HYGCMVDLLGRAGLL EAL+LI+SM +EP+ +IW +LL AC+ H N  +  Y  +R+
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
            EL+P     +VLLSNIY+   +W  V ++R  M  +GIRK+PG SSIE+N  V+EF + 
Sbjct: 386 IELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEINNVVYEFVAS 445

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           ++  PE   I   L  +  +L++ GYV      L D++++EK++ + +HSEKLA+AFGL+
Sbjct: 446 NDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLL 505

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++     +R+VKNLR+C DCH F K++S VY R I+VRD NRFH F +G CSC D+W
Sbjct: 506 NSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGFCSCRDYW 562



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 163/332 (49%), Gaps = 10/332 (3%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           NS+IR Y  +   + ++ ++  +  F ILPD  TFP VL A  +    G G  +HG +++
Sbjct: 58  NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
           MGF  DV+    L++ Y  C  I D  ++FDEM ERN V+W +LI          +A+  
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F  M+ +G +P+  T+V V+SAC+ L     G  +  +I    ++ N  +  AL+DMY K
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           CGAV   +++F E +++N+   N ++S Y   G    AL     ML+   +PD VT L  
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297

Query: 347 VSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           + A    G +  GR     M   + L+  +E +      M+D+  + G  E A  +   M
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHY----GCMVDLLGRAGLLEEALELIQSM 353

Query: 402 S-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
           S     + W +L+     +G+ +    +   +
Sbjct: 354 SIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 20/281 (7%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGL---GHKPSYISKVVCTCAQM 77
           HK    P  S     LK    L +    K  H  +++ G     +  + +  + CTC   
Sbjct: 81  HKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCL-- 138

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
               S++ A + FD   + N  +     +N+LI GY+     V+AI  +  +   G  P 
Sbjct: 139 ----SISDASQLFDEMPERNAVT-----WNALITGYTHNRKFVKAIDAFRGMLADGAQPS 189

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
           + T   VL+AC+   AF +G  +H  I       +VFV   LI+ Y +CG + +  +VF+
Sbjct: 190 ERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFE 249

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
           E+ E+NV +W  LI   A       A+  F  M+ E  KP+ VT + V+ AC   Q L  
Sbjct: 250 EIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCH-QGLVT 308

Query: 258 GDR--VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
             R    +   + G++        +VD+  + G ++ A +L
Sbjct: 309 EGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALEL 349



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 4/140 (2%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV-QV 160
            ++ +N LI GY+  G G  A+  +  +      PD+ TF  VL AC       EG  Q 
Sbjct: 255 NVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQF 314

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARRDL 219
                + G    +    C+++  G  G + +   +   MS E + + W +L+CAC     
Sbjct: 315 MSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGN 374

Query: 220 PKEAVYLFFEMVEEGIKPNS 239
            K   Y+   ++E  ++PN+
Sbjct: 375 TKLGEYIIKRLIE--LEPNN 392


>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 568

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 205/437 (46%), Positives = 283/437 (64%), Gaps = 2/437 (0%)

Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM-LSER- 467
           N+LI     +G + ++ ++F EMP RD ISW++++    +  + +EA+ LF+ M L E  
Sbjct: 132 NALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKESD 191

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
           I  D V M+ V SA   LGAL+L  W++A+I + G++  + L +AL+DM++RCGD  R++
Sbjct: 192 ILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRCGDIDRSV 251

Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
           +VF  M  R+V  WTA I  +A+ G G +A+E F +M+  G+KPD I F+GVL ACSHGG
Sbjct: 252 KVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGG 311

Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
           LV +G  +F SM   +G+ P + HYGCMVDLLGRAG++ EA D ++ M V PN VIW +L
Sbjct: 312 LVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTL 371

Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
           L AC  H  + +A  A ERI ELDP   G +VLLSN Y   G W     VR  M+E  I 
Sbjct: 372 LGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVRNSMRESKIV 431

Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
           K PG S + ++   HEF SGD SHP+   I+  L  +   ++  GY P   NVL D+ E+
Sbjct: 432 KEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLGGYTPSTKNVLHDIQEE 491

Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
           EK++ L +HSEKLA+AF L+       IRV+KNLR+C DCHSF K VS  +DR+I++RD 
Sbjct: 492 EKEHSLGYHSEKLAVAFVLLYHRDRKTIRVIKNLRICYDCHSFMKHVSGFFDRDIVIRDR 551

Query: 828 NRFHFFRQGSCSCSDFW 844
           +RFH FR+GSCSC DFW
Sbjct: 552 SRFHHFRKGSCSCRDFW 568



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 28/348 (8%)

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F YN++IR  +     + A++L+  +    +  D FTFP +L    KSS       +H  
Sbjct: 65  FPYNAVIRHVALHAPSL-ALALFSHMHRTNVPFDHFTFPLIL----KSSKLNPHC-IHTL 118

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K+GF  +++V+N LIN YG  G +    ++FDEM  R+++SW+SLI   A+R LP EA
Sbjct: 119 VLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEA 178

Query: 224 VYLFFEMV--EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           + LF +M   E  I P+ V M+ VISA + L  LELG  V A+I  +G+     + +AL+
Sbjct: 179 LTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALI 238

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           DMY +CG +D + ++F E   RN+V    +++     G  REAL    +M+  G +PDR+
Sbjct: 239 DMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRI 298

Query: 342 TMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
             +  + A +  G +  GR     M   Y +   LE +      M+D+    G+  M   
Sbjct: 299 AFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHY----GCMVDL---LGRAGMVLE 351

Query: 397 IFDHMSNKTV----VSWNSLIAGLIKNGDV---ESAREVFSEM-PGRD 436
            FD +    V    V W +L+   + +  +   E A+E   E+ P  D
Sbjct: 352 AFDFVEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHD 399



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 35/285 (12%)

Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALA 326
           +LG  +N  + NAL++ Y   G++  + +LF E   R+L+  ++++S + + GL  EAL 
Sbjct: 121 KLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALT 180

Query: 327 ILDEMLLHGPR--PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           +  +M L      PD V MLS +SA + LG L  G   H ++ R G+    S+ + +IDM
Sbjct: 181 LFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDM 240

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y +CG                               D++ + +VF EMP R+ ++W  ++
Sbjct: 241 YSRCG-------------------------------DIDRSVKVFDEMPHRNVVTWTALI 269

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGI 503
            GL       EA+E F  M+   +K DR+  +GV  AC + G ++  + +++ +  + GI
Sbjct: 270 NGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGI 329

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGA 547
              ++    +VD+  R G    A      M  R  S  W   +GA
Sbjct: 330 EPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTLLGA 374



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 161/335 (48%), Gaps = 21/335 (6%)

Query: 10  LVLATPTVTTLTNQHKAKTT-PKDSPSIGSLKNCKTLNELKQPHC-HILKQGLG-HKPSY 66
           + L  P++      H  +T  P D  +   +     LN    PHC H L   LG H   Y
Sbjct: 74  VALHAPSLALALFSHMHRTNVPFDHFTFPLILKSSKLN----PHCIHTLVLKLGFHSNIY 129

Query: 67  ISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLY 126
           +   +      GT  SL  + K FD   + +     L  ++SLI  ++  GL  EA++L+
Sbjct: 130 VQNALIN--SYGTSGSLHASLKLFDEMPRRD-----LISWSSLISCFAKRGLPDEALTLF 182

Query: 127 --VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
             ++L    ILPD      V++A +   A   G+ VH  I ++G +  V + + LI+ Y 
Sbjct: 183 QQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYS 242

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
            CGDI    +VFDEM  RNVV+WT+LI   A     +EA+  F++MVE G+KP+ +  + 
Sbjct: 243 RCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMG 302

Query: 245 VISACAKLQNLELGDRVCAYI-DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
           V+ AC+    +E G RV + +  E G++        +VD+  + G V  A       + R
Sbjct: 303 VLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVR 362

Query: 304 -NLVLCNTIMS---NYVRLGLAREALAILDEMLLH 334
            N V+  T++    N+  L LA +A   + E+  H
Sbjct: 363 PNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPH 397



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 8/165 (4%)

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
           I+  + K G H ++ +  AL++ +   G    ++++F  M +RD+ +W++ I   A  G 
Sbjct: 115 IHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGL 174

Query: 554 GEQAVELFNEM-LRQG-IKPDSIVFVGVLTACSHGGLVNQG-W-HLFRSMTDIHGVSPQI 609
            ++A+ LF +M L++  I PD +V + V++A S  G +  G W H F S     GV+  +
Sbjct: 175 PDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRI---GVNLTV 231

Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
                ++D+  R G +  ++ +   MP   N V W +L+     H
Sbjct: 232 SLGSALIDMYSRCGDIDRSVKVFDEMP-HRNVVTWTALINGLAVH 275


>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/537 (39%), Positives = 316/537 (58%), Gaps = 31/537 (5%)

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
           CN+++  Y+ L     +L I   M      PD  T  + + A+AQL D   G+M HG V+
Sbjct: 57  CNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
           + G      IC    D+Y       + C         T +S             +  A +
Sbjct: 117 QMGF-----IC----DVYTSTALVHLYC---------TCLS-------------ISDASQ 145

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
           +F EMP R+ ++WN ++ G T    F +A++ FR ML++  +    T+V V SAC +LGA
Sbjct: 146 LFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGA 205

Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
            +  KWI+ +I  N +  ++ + TAL+DM+A+CG      +VF  + +++V  W   I  
Sbjct: 206 FNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISG 265

Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP 607
            AM G G+ A++ F+ ML +  KPD + F+GVL AC H GLV +G   F SM    G+ P
Sbjct: 266 YAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQP 325

Query: 608 QIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERI 667
           +I HYGCMVDLLGRAGLL EAL+LI+SM +EP+ +IW +LL AC+ H N  +  Y  +R+
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385

Query: 668 TELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSG 727
            EL+P     +VLLSNIY+   +W  V ++R  M  +GIRK+PG SSIE+N  V+EF + 
Sbjct: 386 IELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVAS 445

Query: 728 DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLI 787
           ++  PE   I   L  +  +L++ GYV      L D++++EK++ + +HSEKLA+AFGL+
Sbjct: 446 NDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLL 505

Query: 788 STSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++     +R+VKNLR+C DCH F K++S VY R I+VRD NRFH F +G CSC D+W
Sbjct: 506 NSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGFCSCRDYW 562



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 163/332 (49%), Gaps = 10/332 (3%)

Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
           NS+IR Y  +   + ++ ++  +  F ILPD  TFP VL A  +    G G  +HG +++
Sbjct: 58  NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117

Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
           MGF  DV+    L++ Y  C  I D  ++FDEM ERN V+W +LI          +A+  
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F  M+ +G +P+  T+V V+SAC+ L     G  +  +I    ++ N  +  AL+DMY K
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           CGAV   +++F E +++N+   N ++S Y   G    AL     ML+   +PD VT L  
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297

Query: 347 VSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           + A    G +  GR     M   + L+  +E +      M+D+  + G  E A  +   M
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHY----GCMVDLLGRAGLLEEALELIQSM 353

Query: 402 S-NKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
           S     + W +L+     +G+ +    +   +
Sbjct: 354 SIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 20/281 (7%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGL---GHKPSYISKVVCTCAQM 77
           HK    P  S     LK    L +    K  H  +++ G     +  + +  + CTC   
Sbjct: 81  HKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCL-- 138

Query: 78  GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPD 137
               S++ A + FD   + N  +     +N+LI GY+     V+AI  +  +   G  P 
Sbjct: 139 ----SISDASQLFDEMPERNAVT-----WNALITGYTHNRKFVKAIDAFRGMLADGAQPS 189

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD 197
           + T   VL+AC+   AF +G  +H  I       +VFV   LI+ Y +CG + +  +VF+
Sbjct: 190 ERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFE 249

Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
           E+ E+NV +W  LI   A       A+  F  M+ E  KP+ VT + V+ AC   Q L  
Sbjct: 250 EIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCH-QGLVT 308

Query: 258 GDR--VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
             R    +   + G++        +VD+  + G ++ A +L
Sbjct: 309 EGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALEL 349



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 4/140 (2%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV-QV 160
            ++ +N LI GY+  G G  A+  +  +      PD+ TF  VL AC       EG  Q 
Sbjct: 255 NVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQF 314

Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARRDL 219
                + G    +    C+++  G  G + +   +   MS E + + W +L+CAC     
Sbjct: 315 MSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGN 374

Query: 220 PKEAVYLFFEMVEEGIKPNS 239
            K   Y+   ++E  ++PN+
Sbjct: 375 TKLGEYIIKRLIE--LEPNN 392


>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Brachypodium distachyon]
          Length = 652

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/549 (38%), Positives = 328/549 (59%), Gaps = 2/549 (0%)

Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
           C  R L    + L+  ++    +P+ +T   ++ ACA+LQ    G+ V   +  LG  A+
Sbjct: 96  CTDRGLVTRCLPLYCSLLRSA-RPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHAD 154

Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
             +VNA +     C ++  A++LF     R+LV  NT++  YVR G+ REAL +   M+ 
Sbjct: 155 VFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVG 214

Query: 334 HGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
            G   PD VTM+  VS SAQL DL  GR  HGYV  +G+     + N ++DMY+KCG  E
Sbjct: 215 DGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLE 274

Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
            A  +F+ +  KT+VSW ++I G  + G ++ AR+VF EMP RD   WN ++ G  Q   
Sbjct: 275 RAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKR 334

Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
            +EA+ LF  M    ++ D +TMV + SAC  LGAL++  W++ YI++  +   + L T 
Sbjct: 335 GKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTN 394

Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
           LVDM+++CG+ ++A++VF+ + +++   WTA I  +A  G+ + A++ F  M+  G++PD
Sbjct: 395 LVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPD 454

Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
            I F+GVL+AC H GLV +G   F  M   + +  ++ HY CMVDLLGRAG L EA  L+
Sbjct: 455 EITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLV 514

Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
            +MP+EP+ V+WG+L  AC+ H N+ +   AA ++ ELDP  SG++VLL+N+YA A    
Sbjct: 515 NTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRK 574

Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
              +VR+ M+  G+ K+PG S IE+NG VHEF   D+SH ++  I   L E+  ++    
Sbjct: 575 KADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIEHTA 634

Query: 753 YVPDLTNVL 761
            + D + +L
Sbjct: 635 NMIDTSMLL 643



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 236/492 (47%), Gaps = 72/492 (14%)

Query: 106 YNSLIRGYSCI---GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           YN+ +R  S     GL    + LY  L      PD  TFPF+L AC +      G  V G
Sbjct: 86  YNAALRALSLCTDRGLVTRCLPLYCSLLR-SARPDHLTFPFLLKACARLQERNYGNAVLG 144

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
            ++ +GF  DVFV N  ++F   C  + + R++FD    R++VSW +LI    RR +P+E
Sbjct: 145 NVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPRE 204

Query: 223 AVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
           A+ +F+ MV +G + P+ VTM+ V+S  A+L++LELG R+  Y++  G++    ++N ++
Sbjct: 205 ALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVM 264

Query: 282 DMYMKC-------------------------------GAVDTAKQLFGECKDRNLVLCNT 310
           DMY+KC                               G +D A+++F E  +R++   N 
Sbjct: 265 DMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNA 324

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +M+ YV+    +EAL +  +M      PD +TM++ +SA +QLG L  G   H Y+ R  
Sbjct: 325 LMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRR 384

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           +     +   ++DMY KCG  E A R+F  +  K  ++W ++I+GL  +G  +       
Sbjct: 385 VSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADV------ 438

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
                                    A++ F+ M+   ++ D +T +GV SAC + G +  
Sbjct: 439 -------------------------AIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKE 473

Query: 491 AKWIYAY-IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAM 548
            +  ++  + K  +   M+  + +VD+  R G    A  +   M  + D   W A   A 
Sbjct: 474 GQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFAC 533

Query: 549 AMEGN---GEQA 557
            M GN   GE+A
Sbjct: 534 RMHGNITLGEKA 545



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 213/469 (45%), Gaps = 65/469 (13%)

Query: 82  SLTYAQKAFD-YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKF 139
           S+  A+K FD  +++D      L  +N+LI GY   G+  EA+ ++  + G G + PD+ 
Sbjct: 170 SMAEARKLFDGSHVRD------LVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEV 223

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV--------- 190
           T   V++   +      G ++HG +   G    V + N +++ Y +CGD+          
Sbjct: 224 TMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGI 283

Query: 191 ----------------------DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
                                 D R+VFDEM ER+V  W +L+    +    KEA+ LF 
Sbjct: 284 DKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFH 343

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
           +M E  ++P+ +TMV ++SAC++L  LE+G  V  YID   +  + ++   LVDMY KCG
Sbjct: 344 DMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCG 403

Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            ++ A ++F E  ++N +    ++S     G A  A+     M+  G +PD +T +  +S
Sbjct: 404 NIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLS 463

Query: 349 ASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS- 402
           A    G +  G+     M   Y L   ++ +    + M+D+  + G  + A  + + M  
Sbjct: 464 ACCHAGLVKEGQEFFSLMVSKYHLERKMKHY----SCMVDLLGRAGYLDEAEHLVNTMPM 519

Query: 403 NKTVVSWNSLIAGLIKNGDV----ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
               V W +L      +G++    ++A ++    PG   I    +L  +  E    +  +
Sbjct: 520 EPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIY--VLLANMYAEANMRKKAD 577

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
             RVM+           +GV    G    ++L   ++ +I K+  H D+
Sbjct: 578 KVRVMMRH---------LGVEKVPG-CSCIELNGVVHEFIVKDKSHTDI 616



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 17/227 (7%)

Query: 75  AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
           AQ G  +    A+K FD   + +     +F +N+L+ GY     G EA+ L+ ++    +
Sbjct: 299 AQFGLMDD---ARKVFDEMPERD-----VFPWNALMTGYVQCKRGKEALRLFHDMQEAMV 350

Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
            PD  T   +L+AC++  A   G+ VH  I +      V +   L++ Y +CG+I    R
Sbjct: 351 EPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIR 410

Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN 254
           VF E+ E+N ++WT++I   A       A+  F  M+E G++P+ +T + V+SAC     
Sbjct: 411 VFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGL 470

Query: 255 LELGDR-----VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           ++ G       V  Y  E  MK  + M    VD+  + G +D A+ L
Sbjct: 471 VKEGQEFFSLMVSKYHLERKMKHYSCM----VDLLGRAGYLDEAEHL 513


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/676 (32%), Positives = 377/676 (55%), Gaps = 33/676 (4%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           ++N ++ GY+  G     I  +  +    I P+  TF  VL+ C        GVQ+HG +
Sbjct: 206 IWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV 265

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           V  G D +  ++N L++ Y +CG   D  ++F  MS  + V+W  +I    +  L +E++
Sbjct: 266 VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESL 325

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
             F+EM+  G+ P+++T   ++ + +K +NLE   ++  YI    +  +  + +AL+D Y
Sbjct: 326 TFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAY 385

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            KC  V  A+ +F +C   ++V+   ++S Y+  GL  ++L +   ++     P+ +T++
Sbjct: 386 FKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLV 445

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           S +     L  L  GR  HG++++ G +   +I   +IDMY KCG+  +A  IF+ +S  
Sbjct: 446 SILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK- 504

Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
                                         RD +SWN+M+    Q +    A+++FR M 
Sbjct: 505 ------------------------------RDIVSWNSMITRCAQSDNPSAAIDIFRQMG 534

Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
              I  D V++    SAC  L +    K I+ ++ K+ +  D+   + L+DM+A+CG+ +
Sbjct: 535 VSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLK 594

Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML-RQGIKPDSIVFVGVLTAC 583
            AM VF+ M+++++ +W + I A    G  + ++ LF+EM+ + GI+PD I F+ ++++C
Sbjct: 595 AAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC 654

Query: 584 SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
            H G V++G   FRSMT+ +G+ PQ  HY C+VDL GRAG L EA + +KSMP  P+  +
Sbjct: 655 CHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGV 714

Query: 644 WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKE 703
           WG+LL AC+ H+NV++A  A+ ++ +LDP  SG +VL+SN +A+A +W +V +VR  MKE
Sbjct: 715 WGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKE 774

Query: 704 QGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD 763
           + ++K+PG S IE+N + H F SGD +HPE ++I S+L  +   LR  GY+P    + L 
Sbjct: 775 REVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ-PYLPLH 833

Query: 764 VDEQEKKYLLSHHSEK 779
            +   K Y +S   EK
Sbjct: 834 PESSRKVYPVSRFIEK 849



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 267/549 (48%), Gaps = 33/549 (6%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           +NS+I  +   GL  +A++ Y ++  FG+ PD  TFP ++ AC     F     +   + 
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
            +G D + FV + LI  Y E G I    ++FD + +++ V W  ++   A+       + 
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
            F  M  + I PN+VT  CV+S CA    ++LG ++   +   G+     + N+L+ MY 
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           KCG  D A +LF      + V  N ++S YV+ GL  E+L    EM+  G  PD +T  S
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
            + + ++  +L   +  H Y++R+ +     + + +ID Y KC    MA  IF   ++  
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405

Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
           VV + ++I+G + NG                               ++ +++E+FR ++ 
Sbjct: 406 VVVFTAMISGYLHNG-------------------------------LYIDSLEMFRWLVK 434

Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
            +I  + +T+V +    G L AL L + ++ +I K G      +  A++DM+A+CG    
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 494

Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
           A ++F R+ KRD+ +W + I   A   N   A+++F +M   GI  D +     L+AC++
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554

Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
               + G  +   M   H ++  +     ++D+  + G L  A+++ K+M  E N V W 
Sbjct: 555 LPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWN 612

Query: 646 SLLAACQKH 654
           S++AAC  H
Sbjct: 613 SIIAACGNH 621


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 262/822 (31%), Positives = 419/822 (50%), Gaps = 56/822 (6%)

Query: 32  DSPSIGS-LKNCKTLNE---LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           DS + G+ L+ C   N+    K  HC ILK+G      + + ++        F+    A 
Sbjct: 48  DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKG-SCLDLFATNILLNAYVKAGFDK--DAL 104

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVL 145
             FD   + N  S     Y +L +GY+C     + + LY  L   G  + P  FT    L
Sbjct: 105 NLFDEMPERNNVS-----YVTLTQGYAC----QDPVGLYSRLHREGHELNPHVFTSFLKL 155

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
                 +       +H  IVK+G+D + FV   LIN Y  CG +   R VF+ +  +++V
Sbjct: 156 FVSLDKAEICW--WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIV 213

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
            W  ++         ++++ L   M  +G  PN+ T    + A   L        V   I
Sbjct: 214 VWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQI 273

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            +   + +  +   L+ +Y + G +  A ++F E    ++V  + +++ + + G   +A+
Sbjct: 274 LKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAV 333

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
            I   M      P+  T+ S ++  A       G   HG V++ G +    + N +ID+Y
Sbjct: 334 DIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVY 393

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            KC K + A ++F                               +E+  ++ +SWNT++ 
Sbjct: 394 AKCEKMDTAVKLF-------------------------------AELSSKNVVSWNTVIV 422

Query: 446 GLTQENMFE--EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           G   EN+ E  +A+ +FR  L  ++ V  VT      AC  L +++L   ++    K   
Sbjct: 423 GY--ENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNN 480

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
              + ++ +L+DM+A+CGD + A  VF  ME  DV++W A I   +  G G QA+ +F+ 
Sbjct: 481 AKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDI 540

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M     KP+ + F+GVL+ CS+ GL++QG   F SM   HG+ P + HY CMV L GR+G
Sbjct: 541 MKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSG 600

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L +A++LI+ +P EP+ +IW ++L+A     N + A  +AE I +++P+    +VLLSN
Sbjct: 601 QLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSN 660

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           +YA A +W NVA +R  MKE+G++K PG S IE  G VH F+ G   HP+M  I+ ML  
Sbjct: 661 MYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEW 720

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS-TSKTMPIRVVKNLR 802
           +N +   AGYVPD   VLLD+D++EK   L  HSE+LA+A+GL+   S    I ++KNLR
Sbjct: 721 LNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLR 780

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCHS  K++S +  R++++RD NRFH F  G CSC D W
Sbjct: 781 ICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/600 (38%), Positives = 341/600 (56%), Gaps = 32/600 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           ++ +C   + +E G ++ A I ++G+  N L+   LV++Y  C ++  A  LF     RN
Sbjct: 7   LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRN 66

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           L L N ++  Y   G    A+++  +M  +G  PD+ T    + A + L  +  G+  H 
Sbjct: 67  LFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHK 126

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
            V+R+GLE    +   +IDMY KCG     C                          VES
Sbjct: 127 DVIRSGLESDVFVGAALIDMYAKCG-----C--------------------------VES 155

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
           AR+VF ++  RD + WN+ML   +Q    +E++ L RVM    +K    T V   +A   
Sbjct: 156 ARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASAD 215

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
            G L   K ++ Y  ++G   + ++ TAL+DM+A+ G    A  +F  +E++ V +W A 
Sbjct: 216 NGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAM 275

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           I   AM G+  +A++LF EM +  + PD I FVGVL ACSHGGL+N+G   FRSM     
Sbjct: 276 ITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFN 334

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + P + HY CM+DLLG  G L EA  LI  M VEP+  +WG+LL +C+ H NV++   A 
Sbjct: 335 IWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELAL 394

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           E++ EL+P+  G +V+LSN+YA AGKW  VAR+R  M  +G++K    S IEV  KVH F
Sbjct: 395 EKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAF 454

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            S D SHP+   I + L+     +++AGY P + +V  DV++ EK  ++S HSE+LA+AF
Sbjct: 455 LSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAF 514

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           GLISTS    + ++KNLR+C DCH   K +SK+ +REI +RD NR+H F+ G CSC DFW
Sbjct: 515 GLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/443 (31%), Positives = 226/443 (51%), Gaps = 25/443 (5%)

Query: 39  LKNC---KTLNELKQPHCHILKQGLGHKPSYISKVV---CTCAQMGTFESLTYAQKAFDY 92
           L++C   K +   KQ H  I + G+   P   +K+V   C C       SLT A   FD 
Sbjct: 8   LQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCIC------NSLTNAHLLFDR 61

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
             K N     LF++N +IRGY+  G    AISLY ++  +G++PDKFTFPFVL AC+  S
Sbjct: 62  ISKRN-----LFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALS 116

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
           A  EG ++H  +++ G + DVFV   LI+ Y +CG +   R+VFD++ ER+VV W S++ 
Sbjct: 117 AMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLA 176

Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
             ++   P E++ L   M   G+KP   T V  I+A A    L  G  +  Y    G ++
Sbjct: 177 TYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFES 236

Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML 332
           N  +  AL+DMY K G+V+ A+ LF   +++ +V  N +++ Y   G A EAL +  EM 
Sbjct: 237 NDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM- 295

Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT--MIDMYMKCGK 390
                PD +T +  ++A +  G L  G+M H   + +    W ++ +   MID+   CG+
Sbjct: 296 KGKVLPDHITFVGVLAACSHGGLLNEGKM-HFRSMISDFNIWPTVQHYTCMIDLLGHCGR 354

Query: 391 QEMACRIFDHMSNKTVVS-WNSLIAGLIKNGDVES---AREVFSEMPGRDHISWNTMLGG 446
            E A ++   M  +     W +L+     +G+VE    A E   E+   D  ++  +   
Sbjct: 355 LEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNM 414

Query: 447 LTQENMFEEAMELFRVMLSERIK 469
             Q   ++    L  +M+++ +K
Sbjct: 415 YAQAGKWDGVARLRDLMMNKGLK 437



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 210/431 (48%), Gaps = 41/431 (9%)

Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
           +  +L +C    A   G Q+H  I ++G   +  +   L+N Y  C  + +   +FD +S
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
           +RN+  W  +I   A     + A+ L+++M + G+ P+  T   V+ AC+ L  +E G +
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGL 320
           +   +   G++++  +  AL+DMY KCG V++A+Q+F +  +R++V  N++++ Y + G 
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
             E+LA+   M  +G +P   T + +++ASA  G L  G+  HGY  R+G E  D +   
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR---DH 437
           ++DMY K G   +A  +F+ +  K VVSWN++I G   +G    A ++F EM G+   DH
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPDH 303

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAY 497
           I++  +L   +   +  E    FR M+S                       D   W    
Sbjct: 304 ITFVGVLAACSHGGLLNEGKMHFRSMIS-----------------------DFNIWP--- 337

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN--- 553
                    +Q  T ++D+   CG  + A ++   M  + D   W A + +  + GN   
Sbjct: 338 --------TVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEM 389

Query: 554 GEQAVELFNEM 564
           GE A+E   E+
Sbjct: 390 GELALEKLVEL 400


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/631 (36%), Positives = 357/631 (56%), Gaps = 44/631 (6%)

Query: 221 KEAVYLF--FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
           ++A+ +F  FE+ E+G      T   +I+AC  L+++    R+C Y+ + G + +  M N
Sbjct: 113 RDALEMFEIFEL-EDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRN 171

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL----DEMLLH 334
            ++ M++KCG +  A +LF E   RN V   TI+S YV  G   EA  +     +E    
Sbjct: 172 RVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDC 231

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           GPR    T  + + ASA L  +  GR  H   ++ GL     +   +IDMY KCG     
Sbjct: 232 GPR----TFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGS---- 283

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                                      +E A  VF EMP +  + WN+++ G       E
Sbjct: 284 ---------------------------LEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSE 316

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           EA++L+  M    +K+D  T   +   C  L ++  AK ++A + +NG   D+   TALV
Sbjct: 317 EALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALV 376

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           D +++ G    A  VF RM  R++ +W A I      G+GE+A+++F +MLR+G+ P+ +
Sbjct: 377 DFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHV 436

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
            F+ VL+ACS  GL  +GW +F+SMT  H V P+ +H+ CM++LLGR GLL EA  LI+ 
Sbjct: 437 TFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRK 496

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
            P +P   +W +LL AC+ H N+++  +AAE++  ++PEK   +++L NIY S+GK    
Sbjct: 497 APFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEA 556

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           A V   +K +G+R LP  S IEVN + H F SGD+ H ++  +   + E+   +   GYV
Sbjct: 557 ADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYV 616

Query: 755 PDLTNVLL-DVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
           P+  N +L DVDE E+K  + +HSEKLA+A+GL++T +  P+++V++ R+C DCHS  KL
Sbjct: 617 PEEQNFMLPDVDENEEKIRM-YHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKL 675

Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           ++ +  REI++RD +RFH FR GSCSC D+W
Sbjct: 676 IAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 230/480 (47%), Gaps = 23/480 (4%)

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  ++NAC    +     ++   +V  GF+ D ++ N ++  + +CG ++D  R+FDEM
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
             RN VSW ++I          EA  LF  M EE       T   +I A A L+ +  G 
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR 253

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           ++ +   + G+  +  +  AL+DMY KCG+++ A  +F E  D+ +V  N+I++ Y   G
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHG 313

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
            + EAL +  EM   G + D  T    +   ++L  +   +  H  ++RNG  G D + N
Sbjct: 314 YSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGF-GLDVVAN 372

Query: 380 T-MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR--- 435
           T ++D Y K GK + A  +FD MS + ++SWN+LIAG   +G  E A ++F +M      
Sbjct: 373 TALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMM 432

Query: 436 -DHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKW 493
            +H+++  +L   +   +FE   E+F+ M  + ++K   +    +    G  G LD A  
Sbjct: 433 PNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEA-- 490

Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQR---AMQVFRRMEKRDVSAWTAAIGAMAM 550
            YA I K        +  AL+      G+ +    A +    ME   +S +   +     
Sbjct: 491 -YALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNS 549

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G  ++A ++F  + R+G++        +L ACS   + NQ  H F S  D H V  + V
Sbjct: 550 SGKLKEAADVFQTLKRKGLR--------MLPACSWIEVNNQP-HAFLS-GDKHHVQIEKV 599



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 130/255 (50%), Gaps = 12/255 (4%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF------TFPFVLNACTKSSAFGEGVQ 159
           + ++I GY   G  VEA  L++      ++ ++F      TF  ++ A         G Q
Sbjct: 201 WGTIISGYVDSGNYVEAFRLFI------LMREEFYDCGPRTFATMIRASAGLEIIFPGRQ 254

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H   +K G  +D+FV   LI+ Y +CG + D   VFDEM ++ +V W S+I   A    
Sbjct: 255 LHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGY 314

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNA 279
            +EA+ L+ EM + G+K +  T   +I  C++L ++    +V A +   G   + +   A
Sbjct: 315 SEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTA 374

Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           LVD Y K G VD A+ +F     RN++  N +++ Y   G   EA+ + ++ML  G  P+
Sbjct: 375 LVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPN 434

Query: 340 RVTMLSAVSASAQLG 354
            VT L+ +SA +  G
Sbjct: 435 HVTFLAVLSACSISG 449



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 9/249 (3%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
           +Q H   +K GLG        +  +CA +  +      + A  + + D     T+  +NS
Sbjct: 253 RQLHSCAIKAGLGQD------IFVSCALIDMYSKCGSLEDA--HCVFDEMPDKTIVGWNS 304

Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
           +I GY+  G   EA+ LY E+   G+  D FTF  ++  C++ ++     QVH ++V+ G
Sbjct: 305 IIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNG 364

Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
           F  DV     L++FY + G + D R VFD MS RN++SW +LI         +EA+ +F 
Sbjct: 365 FGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFE 424

Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVDMYMKC 287
           +M+ EG+ PN VT + V+SAC+     E G  +  +   +  +K  A+    ++++  + 
Sbjct: 425 KMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGRE 484

Query: 288 GAVDTAKQL 296
           G +D A  L
Sbjct: 485 GLLDEAYAL 493


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 245/712 (34%), Positives = 368/712 (51%), Gaps = 98/712 (13%)

Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
           DRD    N +I  Y   G + + R++F E   R+ ++W+SLI    R     EA+ LF+E
Sbjct: 69  DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWE 128

Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
           M  EG +PN  T   V+  C+    LE G ++ A+  +    +NA +V  LVDMY KC  
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188

Query: 290 VDTAKQLFGECKD-RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
           +  A+ LF    D RN VL   +++ Y + G   +A+    +M   G   ++ T  S ++
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A   +     G   HG ++R+G      + + ++DMY KCG                   
Sbjct: 249 ACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCG------------------- 289

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
                       D+ +AR +   M   D +SWN+M+ G  ++ + EEA+ LFR+M    +
Sbjct: 290 ------------DLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHM 337

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
           K+D  T   + +                               ALVDM+A+ G    A  
Sbjct: 338 KIDEFTYPSLVN------------------------------NALVDMYAKRGYFDYAFD 367

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG-- 586
           VF +M  +DV +WT+ +      G+ E+A+ LF EM   GI PD IV   VL+A  +   
Sbjct: 368 VFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLV 427

Query: 587 ------GLVN----------------------------QGWHLFRSMTDIHGVSPQIVHY 612
                 G +                             +G   F+SM +++G+ P   HY
Sbjct: 428 SMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHY 487

Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
            CM+DLLGR+G L EA +L+  M V+P+  +W +LLAAC+ H NV++   AA  + EL+P
Sbjct: 488 ACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEP 547

Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
           + +  +VLLSN+Y++AGKW   A+ R  MK +G+ K PG S IE++ KVH F S D SHP
Sbjct: 548 KNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHP 607

Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
               I S + E+   +++AGYVPD+   L D+DE+ K+  L++HSEKLA+AFGL++    
Sbjct: 608 RTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPG 667

Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            PIR+ KNLR+C DCH+  K VS V+ R +I+RD+N FH FR+G+CSCSD+W
Sbjct: 668 APIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 210/443 (47%), Gaps = 75/443 (16%)

Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
           ++ +++ GYS  G G +AI  + ++ G GI  ++FTFP +L AC   SA G G QVHG I
Sbjct: 207 LWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCI 266

Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
           V+ GF  +VFV + L++ Y +CGD+ + RR+ + M   + VSW S+I  C R+ L +EA+
Sbjct: 267 VRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEAL 326

Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
            LF  M    +K                            IDE      +L+ NALVDMY
Sbjct: 327 SLFRIMHLRHMK----------------------------IDEFTYP--SLVNNALVDMY 356

Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
            K G  D A  +F +  D++++   ++++  V  G   EAL +  EM + G  PD++ + 
Sbjct: 357 AKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIA 416

Query: 345 SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
           + +SA                           + N+++ MY KCG  E A ++FD M  +
Sbjct: 417 AVLSA---------------------------LDNSLVSMYAKCGCIEDANKVFDSMEIQ 449

Query: 405 TVVSWNSLIAGLIKNGD----VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
            V++W +LI G  +NG      +S  EV+   PG +H  +  M+  L +     EA EL 
Sbjct: 450 DVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEH--YACMIDLLGRSGKLMEAKELL 507

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDL----AKWIYAYIEKNGIHCDMQLATALVDM 516
             M    ++ D      + +AC   G ++L    A  ++    KN +         L ++
Sbjct: 508 NQMA---VQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVP-----YVLLSNL 559

Query: 517 FARCGDPQRAMQVFRRMEKRDVS 539
           ++  G  + A +  R M+ R VS
Sbjct: 560 YSAAGKWEEAAKTRRLMKLRGVS 582



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 11/336 (3%)

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           N ++    KCG+ + A ++FD M ++   SWN++I     +G +  AR++F E P R  I
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           +W++++ G  +     EA+ELF  M  E  + ++ T   V   C     L+  K I+A+ 
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQA 557
            K     +  + T LVDM+A+C     A  +F    +KR+   WTA +   +  G+G +A
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKA 224

Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
           +E F +M  +GI+ +   F  +LTAC        G  +   +    G    +     +VD
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVR-SGFGANVFVGSALVD 283

Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEK--- 674
           +  + G L  A  ++++M V+ + V W S++  C + Q +   A +  RI  L   K   
Sbjct: 284 MYSKCGDLSNARRMLETMEVD-DPVSWNSMIVGCVR-QGLGEEALSLFRIMHLRHMKIDE 341

Query: 675 ----SGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
               S V+  L ++YA  G +     V  +M ++ +
Sbjct: 342 FTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDV 377



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 187/442 (42%), Gaps = 76/442 (17%)

Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
           C +L++ EL   +  +++  G   ++   N ++    KCG VD A++LF    DR+    
Sbjct: 16  CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75

Query: 309 NT-------------------------------IMSNYVRLGLAREALAILDEMLLHGPR 337
           NT                               ++S Y R G   EAL +  EM   G R
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
           P++ T  S +   +    L  G+  H + ++   +    +   ++DMY KC     A  +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195

Query: 398 FDHMSNK-TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           F+   +K   V W +++ G  +NGD                                 +A
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDG-------------------------------HKA 224

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +E FR M  E I+ ++ T   + +ACG + A      ++  I ++G   ++ + +ALVDM
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDM 284

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +++CGD   A ++   ME  D  +W + I     +G GE+A+ LF  M  + +K D   +
Sbjct: 285 YSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTY 344

Query: 577 VGVLTAC-----SHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
             ++        +  G  +  + +F  MTD   +S   +  GC+ +     G   EAL L
Sbjct: 345 PSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN-----GSYEEALRL 399

Query: 632 ---IKSMPVEPNDVIWGSLLAA 650
              ++ M + P+ ++  ++L+A
Sbjct: 400 FCEMRIMGIHPDQIVIAAVLSA 421



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 68/245 (27%)

Query: 85  YAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFV 144
           Y   AFD + K   T   +  + SL+ G    G   EA+ L+ E+   GI PD+     V
Sbjct: 361 YFDYAFDVFEK--MTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAV 418

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNV 204
           L+A                           ++N L++ Y +CG I D  +VFD M  ++V
Sbjct: 419 LSA---------------------------LDNSLVSMYAKCGCIEDANKVFDSMEIQDV 451

Query: 205 VSWTSLICACARRDLPKEAVYLFFEMVEE--GIKPNSVTMVCVI---------------- 246
           ++WT+LI   A+    ++    +F+ +EE  GIKP      C+I                
Sbjct: 452 ITWTALIVGYAQNGRGRD----YFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELL 507

Query: 247 ----------------SACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
                           +AC    N+ELG+R    + EL  K NA+    L ++Y   G  
Sbjct: 508 NQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPK-NAVPYVLLSNLYSAAGKW 566

Query: 291 DTAKQ 295
           + A +
Sbjct: 567 EEAAK 571


>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/538 (39%), Positives = 312/538 (57%), Gaps = 31/538 (5%)

Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYV 366
           LCN+++  Y        ++ I  +M  +G  PD  T  + + + AQL     G+  H  +
Sbjct: 109 LCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCI 168

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAR 426
           ++ G E    +   +++MY  C                                 V  AR
Sbjct: 169 IQMGFESNVYVSTALVNMYGTCS-------------------------------SVSDAR 197

Query: 427 EVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG 486
           +VF E+P R+ +SWN ++ G     MF + +++FR M     K   VTMVGV  AC +LG
Sbjct: 198 QVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLG 257

Query: 487 ALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIG 546
           AL+  +WI  YI+ N +  ++ + TAL+DM+A+CG    A ++F+ M  ++V  W   I 
Sbjct: 258 ALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLIS 317

Query: 547 AMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
             AM G GE A++ F+ M+ +  KPD + F+GVL AC H GLVN+G   F SM +  G+ 
Sbjct: 318 GYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLR 377

Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
           P+I HYGCMVDLLGRAG L EA  LI++M ++P+ +IW  LL AC+ H N+ +  +A ++
Sbjct: 378 PRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKK 437

Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTS 726
           + EL+P     +VLL+N+YA   +W  V  VR  M  + +RK+PG SSIE++  V+EF  
Sbjct: 438 LLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFVV 497

Query: 727 GDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGL 786
            +   P    +  +L +MN +L+ AGYV D      D++E+EK++ L +HSEKLA+AFGL
Sbjct: 498 SNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSLMYHSEKLALAFGL 557

Query: 787 ISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + +   + +R+VKNLR+C DCH F K+VSKVY R+I VRD NRFH F  G+CSC D+W
Sbjct: 558 LKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNRFHHFVGGACSCKDYW 615



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 195/418 (46%), Gaps = 26/418 (6%)

Query: 24  HKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
           H     P  + ++   +N   + E K  H         H    +S+++     +     +
Sbjct: 20  HNLTIRPSSTSALTLCENPPQITESKHSHLTKSISNHAHMNQMLSQMIMNYIPIDHLNLM 79

Query: 84  TYAQKAFDYYIKDNETSATLFMY------------NSLIRGYSCIGLGVEAISLYVELAG 131
               K  D+ +  +  +A+  ++            NS+IR Y+     + ++ +Y ++  
Sbjct: 80  ----KLIDFSVSSHGFAASALLFTQFYGFIDSDLCNSMIRCYTDSNKHLHSVFIYTQMWK 135

Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
            GI PD  TFP VL +  +      G  +H  I++MGF+ +V+V   L+N YG C  + D
Sbjct: 136 NGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSD 195

Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
            R+VFDE+ +RN+VSW +LI       + ++ + +F EM   G KP  VTMV V+ ACA 
Sbjct: 196 ARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAH 255

Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
           L  L  G  +  YID   ++ N  +  AL+DMY KCG VD A+++F   + +N+   N +
Sbjct: 256 LGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVL 315

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYV 366
           +S Y   G    AL     M++   +PD VT L  + A    G +  GR     M   + 
Sbjct: 316 ISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFG 375

Query: 367 LRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE 423
           LR  +E +      M+D+  + G  + A ++   MS     + W  L+     +G+++
Sbjct: 376 LRPRIEHY----GCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQ 429



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 169/348 (48%), Gaps = 36/348 (10%)

Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
            +V+++ +M + GI P+S T   V+ + A+L   ELG  +   I ++G ++N  +  ALV
Sbjct: 125 HSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALV 184

Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
           +MY  C +V  A+Q+F E  DRN+V  N +++ Y    + R+ + +  EM + G +P  V
Sbjct: 185 NMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEV 244

Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
           TM+  + A A LG L  GR    Y+  N L     +   +IDMY KCG  + A +IF  M
Sbjct: 245 TMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAM 304

Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
             K V +WN LI+G   NG  ESA + FS                               
Sbjct: 305 RVKNVYTWNVLISGYAMNGRGESALQAFSR------------------------------ 334

Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARC 520
            M+ E+ K D VT +GV  AC + G ++  +  +  + E+ G+   ++    +VD+  R 
Sbjct: 335 -MIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRA 393

Query: 521 GDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVELFNEM 564
           G    A Q+ + M  + D   W   +GA  + GN   GE A++   E+
Sbjct: 394 GFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLEL 441


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/609 (36%), Positives = 357/609 (58%), Gaps = 14/609 (2%)

Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFD-RDVFVENCL 179
           EA+ +  ++   GI P   T+  +L  C  + +  +   +H  +++  F+ +D+ + N L
Sbjct: 47  EALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106

Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
           ++ Y + G +V+ RRVFDEM  +NVVSWT++I A AR +  +EA+  F+EM + GI+PN 
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNH 166

Query: 240 VTMVCVISACAKLQNL-ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
            T   ++ AC  L+ L E  D +     + G ++N  + N LVDMY K G ++ A++LF 
Sbjct: 167 FTFASILPACTDLEVLGEFHDEIV----KGGFESNVFVGNGLVDMYAKRGCIEFARELFD 222

Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
           +   R++V  N +++ YV+ GL  +AL +  E+    P+ D +T  + ++  AQ GD+  
Sbjct: 223 KMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEI----PKRDVITWNTMMAGYAQCGDVEN 278

Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
                  +    L  W    NTMI  Y++ G  + A ++F  M  + V+SWN++I+G  +
Sbjct: 279 AVELFEKMPEQNLVSW----NTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQ 334

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           NG VE A ++F  MP  + +SWN M+ G +Q    E A++LF  M    +K +  T   V
Sbjct: 335 NGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIV 394

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
             AC  L  L+     +  + ++G   D+ +   LV M+A+CG  + A +VF RM ++D 
Sbjct: 395 LPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDS 454

Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
           ++ +A I   A+ G  ++++ELF +M   G+KPD + FVGVL+AC H GLV++G   F  
Sbjct: 455 ASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDI 514

Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
           MT  + ++P + HYGCM+DLLGRAG   EA DLI  MP++P+  +WGSLL+AC+ H N+D
Sbjct: 515 MTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNID 574

Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
           +    A+ +  L+P+    +VLLSNIYA+AG+W ++  VR +MK++ ++K  G S I + 
Sbjct: 575 LGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIK 634

Query: 719 GKVHEFTSG 727
            +VH F  G
Sbjct: 635 KQVHAFLVG 643



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 246/540 (45%), Gaps = 70/540 (12%)

Query: 41  NCKTLNELKQPHCHILK-QGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNET 99
           N K+L + K  H H+++ Q      S  +K+V    ++G   SL  A++ FD     N  
Sbjct: 76  NAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLG---SLVEARRVFDEMPVKNVV 132

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           S T     ++I  Y+    G EA+  + E+   GI P+ FTF  +L ACT     GE   
Sbjct: 133 SWT-----AMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE--- 184

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
            H  IVK GF+ +VFV N L++ Y + G I   R +FD+M +R+VVSW ++I    +  L
Sbjct: 185 FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGL 244

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQN-LELGDR------------VCAYID 266
            ++A+ LF E+ +  +   + TM+   + C  ++N +EL ++            +  Y+ 
Sbjct: 245 IEDALKLFQEIPKRDVITWN-TMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQ 303

Query: 267 ELGMKA-----------NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
              +K            N +  NA++  + + G V+ A +LF    + N+V  N +++ Y
Sbjct: 304 NGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGY 363

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            + G A  AL +  +M +   +P+  T    + A A L  L  G   H  V+R+G +   
Sbjct: 364 SQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDV 423

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + NT++ MY KCG  E A ++FD M  +   S +++I G   NG               
Sbjct: 424 LVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAING--------------- 468

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                             +E++ELF  M    +K DRVT VGV SAC + G +D  +  +
Sbjct: 469 ----------------CSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYF 512

Query: 496 AYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
             + +   I   M+    ++D+  R G    A  +  +M  K D   W + + A     N
Sbjct: 513 DIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNN 572



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 208/387 (53%), Gaps = 18/387 (4%)

Query: 210 LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG 269
           L+ +  ++   +EA+++  +MVE GI P+S T   ++  C   ++L     + A++ +  
Sbjct: 35  LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94

Query: 270 MKANALMV-NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAIL 328
            +   + + N LV +Y+K G++  A+++F E   +N+V    +++ Y R    +EAL   
Sbjct: 95  FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154

Query: 329 DEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
            EM   G +P+  T  S + A   L  L  G   H  +++ G E    + N ++DMY K 
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEVL--GEF-HDEIVKGGFESNVFVGNGLVDMYAKR 211

Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT 448
           G  E A  +FD M  + VVSWN++IAG ++NG +E A ++F E+P RD I+WNTM+ G  
Sbjct: 212 GCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYA 271

Query: 449 QENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL--GALDLAKWIYAYI-EKNGIHC 505
           Q    E A+ELF  M  + + V   TM+      GY+  G++  A  ++  + E+N I  
Sbjct: 272 QCGDVENAVELFEKMPEQNL-VSWNTMIA-----GYVQNGSVKEAFKLFQIMPERNVISW 325

Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
           +     A++  FA+ G  + A+++F+ M + +V +W A I   +  G  E A++LF +M 
Sbjct: 326 N-----AVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQ 380

Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQG 592
              +KP++  F  VL AC+   ++ QG
Sbjct: 381 MVDMKPNTETFAIVLPACAALAVLEQG 407


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/681 (35%), Positives = 378/681 (55%), Gaps = 40/681 (5%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           +VF  N LIN Y +   I   RRVFDE+ + ++VS+ +LI A A R      + LF E+ 
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           E  +  +  T+  VI+AC    ++ L  ++  ++   G    A + NA++  Y + G + 
Sbjct: 134 ELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLS 191

Query: 292 TAKQLF---GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            A+++F   GE   R+ V  N ++    +     EA+ +  EM+  G + D  TM S ++
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLT 251

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A   + DL+ GR  HG ++++G  G   + + +ID+Y KC    + CR            
Sbjct: 252 AFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECR------------ 299

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLT-QENMFEEAMELFRVMLSER 467
                             +VF E+   D + WNTM+ G +  E++ E+ +  FR M    
Sbjct: 300 ------------------KVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNG 341

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI-HCDMQLATALVDMFARCGDPQRA 526
            + D  + V V SAC  L +  L K ++A   K+ + +  + +  ALV M+++CG+   A
Sbjct: 342 FRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDA 401

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            +VF  M + +  +  + I   A  G   +++ LF  ML + I P+SI F+ VL+AC H 
Sbjct: 402 RRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHT 461

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           G V +G   F  M +   + P+  HY CM+DLLGRAG L EA  +I++MP  P  + W +
Sbjct: 462 GKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWAT 521

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+KH NV++A  AA     L+P  +  +V+LSN+YASA +W   A V+  M+E+G+
Sbjct: 522 LLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGV 581

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL---D 763
           +K PG S IE++ KVH F + D SHP +  I   + +M  +++ AGYVPD+   L+   +
Sbjct: 582 KKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEE 641

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           V+  E++  L +HSEKLA+AFGLIST + +PI VVKNLR+C DCH+  KL+S +  REI 
Sbjct: 642 VEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREIT 701

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD +RFH F++G CSC D+W
Sbjct: 702 VRDTHRFHCFKEGHCSCRDYW 722



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 229/490 (46%), Gaps = 48/490 (9%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD   + +  S     YN+LI  Y+  G     + L+ E+    +  D FT   V+
Sbjct: 94  ARRVFDEIPQPDIVS-----YNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVI 148

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE---R 202
            AC      G   Q+H  +V  G D    V N ++  Y   G + + RRVF EM E   R
Sbjct: 149 TAC--GDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGR 206

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           + VSW ++I AC +     EAV LF EMV  G+K +  TM  V++A   +++L  G +  
Sbjct: 207 DEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFH 266

Query: 263 AYIDELGMKANALMVNALVDMYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNY-VRLGL 320
             + + G   N+ + + L+D+Y KC G++   +++F E    +LVL NT++S + +   L
Sbjct: 267 GMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDL 326

Query: 321 AREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE-GWDSICN 379
           + + L    EM  +G RPD  + +   SA + L     G+  H   +++ +     S+ N
Sbjct: 327 SEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNN 386

Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG-DVESAREVFSEMPGRDHI 438
            ++ MY KCG    A R+FD M     VS NS+IAG  ++G +VES R            
Sbjct: 387 ALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLR------------ 434

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAY 497
                               LF +ML + I  + +T + V SAC + G ++   K+    
Sbjct: 435 --------------------LFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMM 474

Query: 498 IEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMAMEGNGEQ 556
            E+  I  + +  + ++D+  R G  + A ++   M     S  W   +GA    GN E 
Sbjct: 475 KERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVEL 534

Query: 557 AVELFNEMLR 566
           AV+  NE LR
Sbjct: 535 AVKAANEFLR 544


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/570 (39%), Positives = 335/570 (58%), Gaps = 36/570 (6%)

Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
            ++N L++MY+K G +  A+ +F +  DRN+V   T++S Y    L  +AL  L  ML  
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G RP+  T  S + A   L +L   R  H  +++ GL+    + + +ID+Y +       
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSR------- 110

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
                         W          G++E+A  VF EM   D + W++++ G  Q +  +
Sbjct: 111 --------------W----------GELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGD 146

Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
           EA+ LF+ M        + T+  V  AC  L  L+L + ++ ++ K     D+ L  AL+
Sbjct: 147 EALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALL 204

Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
           DM+ +CG  + A  VF RM ++DV +W+  I  +A  G  ++A++LF  M   GIKP+ +
Sbjct: 205 DMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYV 264

Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
             VGVL ACSH GLV +G + F SM ++ G+ P   HYGCM+DLLGRAG L EA+DLI  
Sbjct: 265 TIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINE 324

Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
           M  EP+ V W +LL AC+ H+NVD+A +AA++I  LDP+ +G +VLLSNIYA+  +W +V
Sbjct: 325 MECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDV 384

Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
           A VR  M  +GI+K PG S IEV+ ++H F  GD SHP++  I+  L ++  +L   GYV
Sbjct: 385 AEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYV 444

Query: 755 PDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLV 814
           PD   VL D++ ++ +  L +HSEKLA+ FGL+S  +   IR+ KNLR+C DCH F KL+
Sbjct: 445 PDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLL 504

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +K+  R I++RD  R+H F+ G CSC DFW
Sbjct: 505 AKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 198/398 (49%), Gaps = 44/398 (11%)

Query: 174 FVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEE 233
           F+ N LIN Y + G + D + VFD+M +RNVVSWT++I A +   L  +A+     M+ E
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTA 293
           G++PN  T   V+ AC  L NL    ++   I ++G+ ++  + +AL+D+Y + G ++ A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 294 KQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQL 353
            ++F E    +LV+ ++I++ + +     EAL +   M   G    + T+ S + A   L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 354 GDLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
             L  GR  H +VL+     +D    + N ++DMY KCG  E A  +F  M  K V+SW+
Sbjct: 178 ALLELGRQVHVHVLK-----YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWS 232

Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
           ++IAGL +NG        +S                       +EA++LF  M    IK 
Sbjct: 233 TMIAGLAQNG--------YS-----------------------KEALKLFESMKVLGIKP 261

Query: 471 DRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
           + VT+VGV  AC + G ++    + ++  E  GI    +    ++D+  R G    A+ +
Sbjct: 262 NYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDL 321

Query: 530 FRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
              ME + D   W A + A  +  N + A+    ++LR
Sbjct: 322 INEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILR 359



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 207/431 (48%), Gaps = 28/431 (6%)

Query: 80  FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
           F  L  AQ  FD     N  S T     ++I  YS   L  +A+   V +   G+ P+ F
Sbjct: 13  FGLLHDAQDVFDKMPDRNVVSWT-----TMISAYSAAKLNDKALEFLVLMLREGVRPNMF 67

Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
           T+  VL AC          Q+H  I+K+G D DVFV + LI+ Y   G++ +  RVFDEM
Sbjct: 68  TYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM 124

Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
              ++V W+S+I   A+     EA+ LF  M   G      T+  V+ AC  L  LELG 
Sbjct: 125 VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGR 184

Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
           +V  ++  L    + ++ NAL+DMY KCG+++ A  +F    +++++  +T+++   + G
Sbjct: 185 QVHVHV--LKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNG 242

Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSIC 378
            ++EAL + + M + G +P+ VT++  + A +  G +  G    H      G++      
Sbjct: 243 YSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHY 302

Query: 379 NTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG--LIKNGDV--ESAREVFSEMP 433
             MID+  + G+   A  + + M      V+W +L+    + +N DV   +A+++    P
Sbjct: 303 GCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDP 362

Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
            +D  ++  +         + +  E+ R M +  IK +          C +   ++++K 
Sbjct: 363 -QDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKE--------PGCSW---IEVSKQ 410

Query: 494 IYAYIEKNGIH 504
           I+A+I  +  H
Sbjct: 411 IHAFILGDRSH 421



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 11/262 (4%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           L+ C  L  L+Q HC I+K GL       S ++   ++ G  E+   A + FD  +    
Sbjct: 73  LRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN---ALRVFDEMV---- 125

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
            +  L +++S+I G++    G EA+ L+  +   G L  + T   VL ACT  +    G 
Sbjct: 126 -TGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGR 184

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
           QVH  ++K  +D+D+ + N L++ Y +CG + D   VF  M E++V+SW+++I   A+  
Sbjct: 185 QVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNG 242

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMV 277
             KEA+ LF  M   GIKPN VT+V V+ AC+    +E G      + EL G+       
Sbjct: 243 YSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHY 302

Query: 278 NALVDMYMKCGAVDTAKQLFGE 299
             ++D+  + G +  A  L  E
Sbjct: 303 GCMIDLLGRAGRLSEAVDLINE 324


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/629 (34%), Positives = 359/629 (57%), Gaps = 35/629 (5%)

Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           T F++N+LIRGYS  G+G   + +Y ++   G+ PD  TFPFVL AC  +    +G +VH
Sbjct: 6   TAFLWNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVH 64

Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP- 220
           G++VK+GF+ DVFV N L++FYG CG + D  RVFDEM E+++VSW ++I   +      
Sbjct: 65  GSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHY 124

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
           ++A+ +F  M++EG+KPNS+T+   +    +L+  + G  V      +G++++  + N+L
Sbjct: 125 RDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSL 184

Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
           +DMY K G    A  +F +   +N+V  N +++N+ +      A+ ++ +M  +G  P+ 
Sbjct: 185 IDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNS 244

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
           VT  + + A A++G +  G+  H   +  G      + N + DMY K G  ++A  +FD 
Sbjct: 245 VTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD- 303

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
                     SL                      RD +S+N ++ G +Q +   E++ LF
Sbjct: 304 ---------TSL----------------------RDEVSYNILIVGHSQTSDCSESLSLF 332

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
             M    +K D V+ +G  SAC  L A+   K I+ ++ +   H  + +A +L+D + +C
Sbjct: 333 SEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKC 392

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVL 580
           G    A  +F RM  +DV++W   I    M G  + A++LF  M +  ++ DS+ F+ VL
Sbjct: 393 GRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVL 452

Query: 581 TACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPN 640
           +ACSHGGL+ +G   F  +    G+ P  +HY CMVDLLGRAGL+ EA +LIK +P+ P+
Sbjct: 453 SACSHGGLLEKGRKYFDELK-ARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPD 511

Query: 641 DVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQ 700
             IWG+LL AC+ + N+++AA+AAE + EL PE SG + LLSN+YA  G+W    R+R  
Sbjct: 512 ANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIREL 571

Query: 701 MKEQGIRKLPGSSSIEVNGKVHEFTSGDE 729
           MK +G++K PG S +++  + H F  G++
Sbjct: 572 MKSRGVKKSPGCSWVQIGEQAHAFVVGEK 600


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 265/810 (32%), Positives = 427/810 (52%), Gaps = 79/810 (9%)

Query: 48  LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYN 107
           L+Q  C I K G        S +V   A+ G   SL +A+K F+    +   + TL   N
Sbjct: 227 LEQIMCTIQKSGFLTDLFVGSGLVSAFAKSG---SLIHARKIFNQM--ETRNAVTL---N 278

Query: 108 SLIRGYSCIGLGVEAISLYVELAG-FGILPDKFTF---PFVLNACTKSSAFGEGVQVHGA 163
            L+ G      G EA  L++++     + P+ +      F   +  +     +G +VHG 
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGH 338

Query: 164 IVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
           ++  G  D  V + N L+N Y +CG I D RRVF  M+E++ VSW S+I    +     E
Sbjct: 339 VITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIE 398

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           AV  +  M    I P S T++  IS+CA L+  +LG ++     +LG+  N  + NAL+ 
Sbjct: 399 AVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMT 458

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA-REALAILDEMLLHGPRPDRV 341
           +Y + G ++  +++F    + + V  N+I+        +  EA+A     L  G + +R+
Sbjct: 459 LYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRI 518

Query: 342 TMLSAVSASAQ--LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
           T  S +SA +    G+L  G+  HG  L+  +    +  N +I  Y KCG          
Sbjct: 519 TFSSVLSAVSSLSFGEL--GKQIHGLALKYNIADEATTENALIACYGKCG---------- 566

Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQENMFEEAME 458
                                +++   ++FS M  R D ++WN+M+ G     +  +A++
Sbjct: 567 ---------------------EMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALD 605

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
           L   M+    ++D      V SA   +  L+    ++A   +  +  D+ + +ALVDM++
Sbjct: 606 LVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYS 665

Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFV 577
           +CG    A++ F  M                          LF  M   G   PD + FV
Sbjct: 666 KCGRLDYALRFFNTM-------------------------PLFANMKLDGQTPPDHVTFV 700

Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
           GVL+ACSH GL+ +G+  F SM+D +G++P+I H+ CM DLLGRAG L +  D I+ MP+
Sbjct: 701 GVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPM 760

Query: 638 EPNDVIWGSLLAACQKH--QNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
           +PN +IW ++L AC +   +  ++   AAE + +L+PE +  +VLL N+YA+ G+W ++ 
Sbjct: 761 KPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLV 820

Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
           + R +MK+  ++K  G S + +   VH F +GD+SHP+ + I   L+E+N ++RDAGYVP
Sbjct: 821 KARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVP 880

Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST-SKTMPIRVVKNLRLCCDCHSFAKLV 814
                L D++++ K+ +LS+HSEKLA+AF L +  S T+PIR++KNLR+C DCHS  K +
Sbjct: 881 QTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHI 940

Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           SK+  R+II+RD+NRFH F+ G CSCSDFW
Sbjct: 941 SKIEGRQIILRDSNRFHHFQDGECSCSDFW 970



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 278/611 (45%), Gaps = 53/611 (8%)

Query: 52  HCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIR 111
           H  + K GL  K  Y+   +   A + T +S++ A+K FD     N  S     +  ++ 
Sbjct: 24  HSRLYKNGL-EKDVYLCNNLIN-AYLETGDSVS-ARKVFDEMPLRNCVS-----WACVVS 75

Query: 112 GYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG--EGVQVHGAIVKMGF 169
           GYS  G   EA+    ++   G+  + + F   L AC +  + G   G Q+HG + K+ +
Sbjct: 76  GYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSY 135

Query: 170 DRDVFVENCLINFYGECGDIVD-GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
             D  V N LI+ Y +CG  +    R FD++  +N VSW S+I   ++    + A  +F+
Sbjct: 136 AVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFY 195

Query: 229 EMVEEGIKPNSVTM-VCVISACAKLQ-NLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
            M  +G +P   T    V +AC+  + ++ L +++   I + G   +  + + LV  + K
Sbjct: 196 SMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAK 255

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM--LLHGPRPDRVTML 344
            G++  A+++F + + RN V  N +M   VR     EA  +  +M  ++       V +L
Sbjct: 256 SGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315

Query: 345 SAV---SASAQLGDLLCGRMCHGYVLRNGLEGW-DSICNTMIDMYMKCGKQEMACRIFDH 400
           S+    S + ++G L  GR  HG+V+  GL  +   I N +++MY KCG           
Sbjct: 316 SSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG----------- 363

Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
                                +  AR VF  M  +D +SWN+M+ GL Q + F EA+E +
Sbjct: 364 --------------------SIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERY 403

Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARC 520
           + M    I     T++   S+C  L    L + I+    K GI  ++ ++ AL+ ++A  
Sbjct: 404 QSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463

Query: 521 GDPQRAMQVFRRMEKRDVSAWTAAIGAMA-MEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
           G      ++F  M + D  +W + IGA+A  E +  +AV  F   LR G K + I F  V
Sbjct: 464 GCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSV 523

Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
           L+A S       G  +   +   + ++ +      ++   G+ G +     +   M    
Sbjct: 524 LSAVSSLSFGELGKQI-HGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERR 582

Query: 640 NDVIWGSLLAA 650
           +DV W S+++ 
Sbjct: 583 DDVTWNSMISG 593



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 197/445 (44%), Gaps = 74/445 (16%)

Query: 16  TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVC 72
            V    +  + +  P     I S+ +C +L   K   Q H   LK G+    S  + ++ 
Sbjct: 399 AVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMT 458

Query: 73  TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV-EAISLYVELAG 131
             A+ G    L   +K F    + ++ S     +NS+I   +     + EA++ ++    
Sbjct: 459 LYAETGC---LNECRKIFSSMPEHDQVS-----WNSIIGALASSERSLPEAVACFLNALR 510

Query: 132 FGILPDKFTFPFVLNACTKSSAFGE-GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
            G   ++ TF  VL+A   S +FGE G Q+HG  +K     +   EN LI  YG+CG++ 
Sbjct: 511 AGQKLNRITFSSVLSA-VSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMD 569

Query: 191 DGRRVFDEMSER-NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
              ++F  MSER + V+W S+I      +L  +A+ L + M++ G + +S     V+SA 
Sbjct: 570 GCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAF 629

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
           A +  LE G  V A      ++++ ++ +ALVDMY KCG +D A + F           N
Sbjct: 630 ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF-----------N 678

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
           T              + +   M L G   PD VT +  +SA +  G           +L 
Sbjct: 679 T--------------MPLFANMKLDGQTPPDHVTFVGVLSACSHAG-----------LLE 713

Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI-KNGDVESARE 427
            G + ++S    M D Y       +A RI +H          S +A L+ + G+++   +
Sbjct: 714 EGFKHFES----MSDSY------GLAPRI-EHF---------SCMADLLGRAGELDKLED 753

Query: 428 VFSEMPGRDHI-SWNTMLGGLTQEN 451
              +MP + ++  W T+LG   + N
Sbjct: 754 FIEKMPMKPNVLIWRTVLGACCRAN 778



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 35/236 (14%)

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           +G     ++ H  + +NGLE    +CN +I+ Y++ G    A ++FD M  +  VSW  +
Sbjct: 14  IGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACV 73

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           ++G  +NG+                                +EA+   R M+ E +  + 
Sbjct: 74  VSGYSRNGE-------------------------------HKEALVFLRDMVKEGVFSNH 102

Query: 473 VTMVGVASACGYLGALDL--AKWIYAYIEKNGIHCDMQLATALVDMFARCGDP-QRAMQV 529
              V    AC  L ++ +   + I+  + K     D  ++  L+ M+ +CG     A++ 
Sbjct: 103 YAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRA 162

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG-VLTACS 584
           F  ++ ++  +W + I   +  G+   A ++F  M   G +P    F   V TACS
Sbjct: 163 FDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACS 218



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 20/186 (10%)

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           V +  V S  G+ GA   AK  ++ + KNG+  D+ L   L++ +   GD   A +VF  
Sbjct: 5   VPLSFVQSCIGHRGA---AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDE 61

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC----SHGGL 588
           M  R+  +W   +   +  G  ++A+    +M+++G+  +   FV  L AC    S G L
Sbjct: 62  MPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGIL 121

Query: 589 VNQGWH--LFRSMTDIHGVSPQIV---HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI 643
             +  H  LF+    +  V   ++   ++ C        G LG AL     + V+ N V 
Sbjct: 122 FGRQIHGLLFKLSYAVDAVVSNVLISMYWKC-------GGSLGYALRAFDDVQVK-NSVS 173

Query: 644 WGSLLA 649
           W S+++
Sbjct: 174 WNSIIS 179


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/577 (37%), Positives = 341/577 (59%), Gaps = 8/577 (1%)

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
           + +K      + L  M  K G +  A++LF +  + + V  NT++S YVR      A A 
Sbjct: 1   MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
            ++M +    P   TM++  + + Q+      R     +    +  W    N MI  Y++
Sbjct: 61  FEDMPIKD-TPSWNTMITGFAQNQQMDK---ARDLFLIMPTKNVVTW----NAMISGYVE 112

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  + A ++F+    K+VV+W ++I G +K G +  A  +F +MP ++ ++WN M+ G 
Sbjct: 113 CGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGY 172

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
            + +  E+ ++LFR M+   I+ +  T+      C  L AL L + ++  + K+ +  D 
Sbjct: 173 IENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDT 232

Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
              T+L+ M+ +CG  +   ++F ++ +RDV  W A I   A  G G++A+ LF+EM+ +
Sbjct: 233 TAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEK 292

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G+KPD I FV VL AC+H G  + G   F SM   +G+  +  HY CMVDLLGRAG L E
Sbjct: 293 GMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVE 352

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
           A+DLI+ MP +P+  ++G+LL AC+ H+N ++A +A++++  LDP  +  +V L+N+YA+
Sbjct: 353 AVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAA 412

Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
             +W +VARVR  MK   + K PG S IEV    H+F SGD+ HPE+ +I   L+E+  +
Sbjct: 413 TKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKK 472

Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
           ++ AGYVPDL   L DV E++K+ LL  HSEKLA+A+GLI      PIRV KNLR+C DC
Sbjct: 473 MKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDC 532

Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           H   K +S++  REIIVRD  RFH F+ G CSC+D+W
Sbjct: 533 HRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 1/235 (0%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           + V     +I  Y + G I    R+F++M E+N+V+W ++I         ++ V LF  M
Sbjct: 129 KSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTM 188

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
           V  GI+PNS T+   +  C++L  L+LG +V   + +  +  +     +L+ MY KCG +
Sbjct: 189 VGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVL 248

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
           +   +LF +   R++V  N ++S Y + G  ++AL + DEM+  G +PD +T ++ + A 
Sbjct: 249 EDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMAC 308

Query: 351 AQLGDLLCG-RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK 404
              G    G +  H      GL         M+D+  + GK   A  + + M  K
Sbjct: 309 NHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFK 363



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 15/293 (5%)

Query: 14  TPTVTTLTN---QHKAKTTPKDSPSIGSLKNCKTLNELKQPH--CHILKQGLG--HKPSY 66
           TP+  T+     Q++     +D   I   KN  T N +   +  C  L   L    K  +
Sbjct: 69  TPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPF 128

Query: 67  ISKVVCTCAQMGTFE--SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
            S V  T    G  +   +  A++ F+   + N     L  +N++I GY       + + 
Sbjct: 129 KSVVAWTAMITGYMKLGRIGLAERLFEKMPEKN-----LVTWNAMIAGYIENHRAEDGVK 183

Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           L+  + GFGI P+  T    L  C++ SA   G QVH  + K     D      LI+ Y 
Sbjct: 184 LFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYC 243

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG + DG ++F ++  R+VV+W ++I   A+    K+A+ LF EM+E+G+KP+ +T V 
Sbjct: 244 KCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVA 303

Query: 245 VISACAKLQNLELGDRVC-AYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
           V+ AC      +LG +   +   + G+ A       +VD+  + G +  A  L
Sbjct: 304 VLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDL 356


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/718 (32%), Positives = 375/718 (52%), Gaps = 57/718 (7%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           AQK FD   + +  S     +NSLI GY   G   + I +++++   G + D+ TF  VL
Sbjct: 127 AQKLFDAMPERDVVS-----WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVL 181

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            +C+     G G+Q+HG  VKMGFD DV   + L++ Y +C  +    + F  M E+N V
Sbjct: 182 KSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWV 241

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW+++I  C + D  +  + LF EM + G+  +  T   V  +CA L  L LG ++  + 
Sbjct: 242 SWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHA 301

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            +     + ++  A +DMYMKC  +  A++LF    + NL   N I+  Y R   + + L
Sbjct: 302 LKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYAR---SDKGL 358

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
            +           D V++  A  A A +   L G   HG  +++  +    + N ++DMY
Sbjct: 359 GL-----------DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMY 407

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGD------------------------ 421
            KCG    AC +F+ M ++  VSWN++IA   +NG+                        
Sbjct: 408 GKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFV 467

Query: 422 -------------VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
                        +E A ++   +  +  +SWN ++ G + +   EEA + F  ML   +
Sbjct: 468 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 527

Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
             D  T   +   C  L  ++L K I+A I K  +  D  +++ LVDM+++CG+ Q    
Sbjct: 528 DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQL 587

Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
           +F +   RD   W A +   A  G GE+A+++F  M  + +KP+   F+ VL AC H GL
Sbjct: 588 IFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 647

Query: 589 VNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
           V +G H F SM   +G+ PQ+ HY C+VD++GR+G + +AL+LI+ MP E + VIW +LL
Sbjct: 648 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 707

Query: 649 AACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRK 708
           + C+ H NV++A  AA  I +L+PE S  +VLLSNIYA+AG W  V ++R  M+  G++K
Sbjct: 708 SICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKK 767

Query: 709 LPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
            PG S IE+  +VH F  GD++HP    I   L  +   ++  GY+PD T+ +L+ DE
Sbjct: 768 EPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD-TDFILNDDE 824



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/605 (22%), Positives = 241/605 (39%), Gaps = 124/605 (20%)

Query: 138 KFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGEC----------- 186
           K TF  +   C+   A   G Q H  ++   F   VFV NCLI  Y +C           
Sbjct: 42  KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101

Query: 187 --------------------GDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
                               GDI   +++FD M ER+VVSW SLI         ++ + +
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161

Query: 227 FFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMK 286
           F +M   G   +  T   V+ +C+ L++   G ++     ++G   + +  +AL+DMY K
Sbjct: 162 FLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 221

Query: 287 CGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
           C  +D + Q F    ++N V  + I++  V+    R  L +  EM   G    + T  S 
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281

Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-MIDMYMKCGKQEMACRIFDHMSNKT 405
             + A L  L  G   HG+ L+    G D +  T  +DMYMKC     A ++F+ + N  
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDF-GTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340

Query: 406 VVSWNSLIAGLIKN----------------------GDVESARE---------------- 427
           + S+N++I G  ++                      GD+E  +                 
Sbjct: 341 LQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 400

Query: 428 ------------------VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
                             VF EM  RD +SWN ++    Q    E+ + LF         
Sbjct: 401 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF--------- 451

Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
                                   I+  I K+ +  D  +  AL+DM+++CG  ++A ++
Sbjct: 452 ------------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKL 487

Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
             R+ ++ V +W A I   +++   E+A + F++ML  G+ PD+  +  +L  C++   V
Sbjct: 488 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTV 547

Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
             G  +   +      S   +    +VD+  + G + +   LI       + V W +++ 
Sbjct: 548 ELGKQIHAQIIKKELQSDAYIS-STLVDMYSKCGNM-QDFQLIFEKAPNRDFVTWNAMVC 605

Query: 650 ACQKH 654
              +H
Sbjct: 606 GYAQH 610


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/568 (38%), Positives = 335/568 (58%), Gaps = 32/568 (5%)

Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GP 336
           + LV  Y++ G    A +LF E  D++LV  N+++S + R       L +L  M    G 
Sbjct: 77  DQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGL 136

Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACR 396
           +P+ VT++  VSA A +G+L  G+  HG  +++G+     + N++I++Y KCG  E AC 
Sbjct: 137 KPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACC 196

Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
           +F+ MS +++V                               SWN+M+       + E+ 
Sbjct: 197 LFEGMSVQSLV-------------------------------SWNSMVAVHVHMGLAEKG 225

Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
           +  F +M    I  D+ T+V +  AC  LG   LA+ ++ YI   G+  ++ +ATAL+D+
Sbjct: 226 IGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDL 285

Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
           +A+ G    + +VF  M   D  AWTA + + AM G G +A+E F  M+R+G+ PD + F
Sbjct: 286 YAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTF 345

Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
             +L+ACSH GLV +G + F+ M + +GV  ++ HY CMVDLLGR+G L +A  LIKSMP
Sbjct: 346 THLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMP 405

Query: 637 VEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVAR 696
           +EPN  +WG+L+ AC+   N+++    AER+  LDP  S  ++ LSN+Y++AG+W + ++
Sbjct: 406 MEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASK 465

Query: 697 VRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPD 756
           VR  MKE+ + + PG S IE   K+H F  GD+SHP+   I + L E+  + R+ G+   
Sbjct: 466 VRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASK 525

Query: 757 LTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSK 816
              VL DVDE+ K+ L++ HSEKLA+AFGL+ T+  MP+ + KN+R+C DCH FAKL+S 
Sbjct: 526 TEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISL 585

Query: 817 VYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +  R II+RD  RFH F  G CSC D+W
Sbjct: 586 IEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 192/390 (49%), Gaps = 34/390 (8%)

Query: 174 FVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM-VE 232
           F+ + L++ Y E G   D   +FDE+ ++++VSW SLI   +RR      + L F M  E
Sbjct: 74  FIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFE 133

Query: 233 EGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDT 292
            G+KPN VT++ V+SACA +  L++G  +     + GM     +VN+L+++Y KCG ++ 
Sbjct: 134 MGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEA 193

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           A  LF     ++LV  N++++ +V +GLA + +     M   G   D+ T++S + A   
Sbjct: 194 ACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACEN 253

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           LG        HGY+L  GL+G  +I   ++D+Y K G    +C++F  M N   V+W ++
Sbjct: 254 LGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAM 313

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           ++    +G             GR                   EA+E F +M+ E +  D 
Sbjct: 314 LSSYAMHG------------RGR-------------------EAIEHFELMVREGVVPDH 342

Query: 473 VTMVGVASACGYLGALDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
           VT   + SAC + G ++  K  +  + E  G+   ++  + +VD+  R G    A ++ +
Sbjct: 343 VTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIK 402

Query: 532 RMEKRDVSA-WTAAIGAMAMEGNGEQAVEL 560
            M     S  W A IGA  + GN E   E+
Sbjct: 403 SMPMEPNSGVWGALIGACRVRGNIELGKEV 432



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 211/459 (45%), Gaps = 45/459 (9%)

Query: 33  SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
           S  I ++  C +++  +  HC ++K  + +   +I   + +     ++  L   + A + 
Sbjct: 42  SALITAISTCSSISYCRALHCRVIKS-VNYNHGFIGDQLVS-----SYVELGCTKDALEL 95

Query: 93  YIKDNETSATLFMYNSLIRGYS-------CIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           +  D      L  +NSLI G+S       C+GL      L+      G+ P++ T   V+
Sbjct: 96  F--DELPDKDLVSWNSLISGFSRRADLGICLGL------LFRMRFEMGLKPNEVTVIPVV 147

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           +AC        G  +HG  VK G   +V V N LIN YG+CG +     +F+ MS +++V
Sbjct: 148 SACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLV 207

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
           SW S++       L ++ +  F  M   GI  +  T+V ++ AC  L   +L + V  YI
Sbjct: 208 SWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYI 267

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
              G+  N  +  AL+D+Y K G +  + ++FG   + + V    ++S+Y   G  REA+
Sbjct: 268 LNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAI 327

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNT 380
              + M+  G  PD VT    +SA +  G +  G+     M   Y +   +E +    + 
Sbjct: 328 EHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHY----SC 383

Query: 381 MIDMYMKCGKQEMACRIFDHM---SNKTVVSWNSLIAGLIKNGDVESAREV----FSEMP 433
           M+D+  + G    A ++   M    N  V  W +LI      G++E  +EV    FS  P
Sbjct: 384 MVDLLGRSGHLNDAYKLIKSMPMEPNSGV--WGALIGACRVRGNIELGKEVAERLFSLDP 441

Query: 434 --GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
              R++I+ + M     Q   + +A ++ R ++ ER+ +
Sbjct: 442 SDSRNYITLSNMYSAAGQ---WRDASKV-RALMKERVLI 476


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/706 (32%), Positives = 371/706 (52%), Gaps = 64/706 (9%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           ++F  N L++       + D   +F  M++R+ VS+ ++I   +       AV L+  ++
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 232 EEG--IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
             G  ++P+ +TM  ++ A + L +  LG +    I  LG   NA + + LV MY K G 
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190

Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRL------------------------------- 318
           +  AK++F E   +N+V+ NT+++  +R                                
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250

Query: 319 GLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC 378
           GL  +AL     M   G   D+ T  S ++A   L  L  G+  H Y++R   +    + 
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310

Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
           + ++DMY KC                                 ++ A   F  M  ++ I
Sbjct: 311 SALVDMYSKCRS-------------------------------IKPAETAFRRMSCKNII 339

Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
           SW  ++ G  Q    EEA+ +F  M  + I  D  T+  V S+C  L +L+     +   
Sbjct: 340 SWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLA 399

Query: 499 EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAV 558
             +G+   + ++ ALV ++ +CG  + A ++F  M   D  +WTA +   A  G  ++ +
Sbjct: 400 LVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETI 459

Query: 559 ELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDL 618
           +LF +ML + +KPD + F+GVL+ACS  G V +G   F SM   HG+ P   HY CM+DL
Sbjct: 460 DLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDL 519

Query: 619 LGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVH 678
             R+G L EA + IK MP+ P+ + WG+LL+AC+   +++I  +AAE + E+DP+    +
Sbjct: 520 YSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASY 579

Query: 679 VLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNIS 738
           VLL +++A+ G W  VA++R  M+++ ++K PG S I+   KVH F++ D+SHP    I 
Sbjct: 580 VLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIY 639

Query: 739 SMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
             L  +N ++ + GY PD+++VL DV + +K +++SHHSEKLA+AFGL+     MPIR+V
Sbjct: 640 EKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIV 699

Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           KNLR+C DCH+  KL+SK+  R+I+VRD  RFH F  G CSC DFW
Sbjct: 700 KNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 237/534 (44%), Gaps = 73/534 (13%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           YN++I G+S  G    A+ LY  L  AG  + P + T   ++ A +       G Q H  
Sbjct: 106 YNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQ 165

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV------------------ 205
           I+++GF  + FV + L+  Y + G I D +RVFDEM  +NVV                  
Sbjct: 166 ILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEA 225

Query: 206 -------------SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
                        +WT+++    +  L  +A+  F  M  +GI  +  T   +++AC  L
Sbjct: 226 RRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGAL 285

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
             LE G ++ AYI       N  + +ALVDMY KC ++  A+  F     +N++    ++
Sbjct: 286 SALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALI 345

Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
             Y + G + EA+ +  EM   G  PD  T+ S +S+ A L  L  G   H   L +GL 
Sbjct: 346 VGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 405

Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
            + ++ N ++ +Y KCG  E A R+FD M     VSW +L+ G  + G            
Sbjct: 406 HYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRA---------- 455

Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA- 491
                                +E ++LF  ML++ +K D VT +GV SAC   G ++   
Sbjct: 456 ---------------------KETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGC 494

Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR-DVSAWTAAIGAMAM 550
            + ++  + +GI       T ++D+++R G  + A +  ++M    D   W   + A  +
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554

Query: 551 EGN---GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
            G+   G+ A E   E+  Q   P S V +  + A    G  NQ   L R M D
Sbjct: 555 RGDMEIGQWAAENLLEIDPQ--NPASYVLLCSMHATK--GNWNQVAQLRRGMRD 604



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 214/452 (47%), Gaps = 34/452 (7%)

Query: 49  KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN----------- 97
           +Q HC IL+ G G      S +V   A+MG       A++ FD     N           
Sbjct: 160 RQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGD---AKRVFDEMDGKNVVMYNTMITGL 216

Query: 98  ------ETSATLF---------MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
                 E +  LF          + +++ G++  GL  +A++ +  +   GI  D++TF 
Sbjct: 217 LRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFG 276

Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER 202
            +L AC   SA  +G Q+H  I++  +D +VFV + L++ Y +C  I      F  MS +
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCK 336

Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
           N++SWT+LI    +    +EAV +F EM  +GI P+  T+  VIS+CA L +LE G +  
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFH 396

Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
                 G+     + NALV +Y KCG+++ A +LF E    + V    +++ Y + G A+
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAK 456

Query: 323 EALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG-RMCHGYVLRNGLEGWDSICNTM 381
           E + + ++ML    +PD VT +  +SA ++ G +  G    H     +G+   D     M
Sbjct: 457 ETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCM 516

Query: 382 IDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVES---AREVFSEMPGRDH 437
           ID+Y + G+ + A      M  +   + W +L++     GD+E    A E   E+  ++ 
Sbjct: 517 IDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNP 576

Query: 438 ISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
            S+  +      +  + +  +L R M   ++K
Sbjct: 577 ASYVLLCSMHATKGNWNQVAQLRRGMRDRQVK 608



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 133/341 (39%), Gaps = 66/341 (19%)

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           + N ++  Y K G+   A R+FD   +  + ++N+L++ L     ++    +F+ M  RD
Sbjct: 43  LLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRD 102

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVML--SERIKVDRVTMVGVASACGYLGALDLAKWI 494
            +S+N ++ G +       A+ L+  +L     ++  R+TM  +  A   LG   L +  
Sbjct: 103 TVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQF 162

Query: 495 YAYIEKNGIHCDMQLATALVDMFAR---CGDPQR-------------------------- 525
           +  I + G   +  + + LV M+A+    GD +R                          
Sbjct: 163 HCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMV 222

Query: 526 --AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTAC 583
             A ++F  M  RD   WT  +      G   QA+  F  M  QGI  D   F  +LTAC
Sbjct: 223 EEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTAC 282

Query: 584 SHGGLVNQGWHLFRSMTDIH-------------------GVSP-----------QIVHYG 613
                + QG  +   +   H                    + P            I+ + 
Sbjct: 283 GALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWT 342

Query: 614 CMVDLLGRAGLLGEALDLIKSMP---VEPNDVIWGSLLAAC 651
            ++   G+ G   EA+ +   M    ++P+D   GS++++C
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSC 383


>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/552 (38%), Positives = 329/552 (59%), Gaps = 34/552 (6%)

Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
           AK +F       +   NT + ++       +A+++   +      PD  T    + A ++
Sbjct: 66  AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125

Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
           L D+  G++ HGYV + GL+    + N ++ +Y  CG+  +A ++FD M  + V++WN +
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185

Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           IA L+K GD E A ++F+EMP R+  SW +M+GG  Q    +EA++LF  M    +  + 
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           VT+V V  AC  +G L L + I+ +  ++G   ++++   L+DM+ +CG  + A ++F  
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDN 305

Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
           ME+R V +W+A I  +A  G  E A+ LFN+M+  G+KP+++ F+G+L ACSH G+V +G
Sbjct: 306 MEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKG 365

Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
              F SMT  +G+ P+I HYGCMVDL  RAGLL EA + I +MP+ PN V+WG+LL  C+
Sbjct: 366 RKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCK 425

Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
            H+NV +A  A   +++LDP   G +V+LSNIYA AG+W +VARVR  M+++G       
Sbjct: 426 VHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGT------ 479

Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
                                         ++  R++  GYVP+ + VLLD++E +K+  
Sbjct: 480 ----------------------------WEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKF 511

Query: 773 LSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHF 832
           L  HSEKLA+ FGLI T+    IR++KNLR+C DCH+  K++S V  REI+VRD NRFH 
Sbjct: 512 LYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHC 571

Query: 833 FRQGSCSCSDFW 844
           F+ GSCSC D+W
Sbjct: 572 FKNGSCSCGDYW 583



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 228/469 (48%), Gaps = 43/469 (9%)

Query: 34  PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
           PS   L N  +  ELKQ H H+LK         +S+V   CA   +F   +YA+  F   
Sbjct: 17  PSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSF---SYAKLIFQLL 73

Query: 94  IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
                 ++ +  +N+ +R ++      +AISL+  L  F I PD +T  FVL AC++   
Sbjct: 74  -----DASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128

Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD---------------- 197
              G  VHG + K+G   ++F++N +++ Y  CG+I   R+VFD                
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188

Query: 198 ---------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
                          EM ERNV SWTS+I   A+    KEA+ LF EM + G+ PN VT+
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248

Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
           V V+ ACA + NL LG R+  + +  G + N  + N L+DMY+KCG ++ A ++F   ++
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308

Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
           R +V  + +++     G A +ALA+ ++M+  G +P+ VT +  + A + +G +  GR  
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKY 368

Query: 363 HGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNG 420
              + R+ G+         M+D++ + G  + A     +M      V W +L+ G   + 
Sbjct: 369 FASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK 428

Query: 421 DVESAREVFSEMPGRDHIS--WNTMLGGLTQENMFEEAMELFRVMLSER 467
           +V+ A E    +   D ++  +  +L  +  E    E +   R ++ +R
Sbjct: 429 NVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
           N     A+ +F  +   +   WNT L    + +   +A+ LF  +    I  D  T   V
Sbjct: 60  NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD- 537
             AC  L  +   K ++ Y+EK G+  +M L   +V ++A CG+   A +VF +M +RD 
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179

Query: 538 ------------------------------VSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
                                         V +WT+ IG  A  G  ++A++LF EM   
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239

Query: 568 GIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGE 627
           G+ P+ +  V VL AC+  G +  G  +    ++  G    I     ++D+  + G L +
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRI-HDFSNRSGYEKNIRVCNTLIDMYVKCGCLED 298

Query: 628 ALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
           A  +  +M  E   V W +++A    H   + A
Sbjct: 299 ACRIFDNME-ERTVVSWSAMIAGLAAHGRAEDA 330


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/614 (36%), Positives = 340/614 (55%), Gaps = 50/614 (8%)

Query: 280 LVDMYMKCGAVDTAKQLFGE--------CKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
           L+ +Y K G + +A+ LF           +  N  LCNT++  Y   G + EA+ +   M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
              G   +  T    +   A     + G + HG V+R G      +   ++DMY KCG+ 
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 392 EMACRIFDHMSNKTVVSWNSLIA------------------------------------- 414
             A  +FD M  + VV W ++I                                      
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243

Query: 415 GLIKNGD--VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
           G + +G   +  AR VF  M  R+ ISWN+ML G TQ     +A+ LF  M +     + 
Sbjct: 244 GQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNP 303

Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
           VT + + SAC YLG+  L + ++ ++  + +  D  L  A++DM+ +CGD   A+++F  
Sbjct: 304 VTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNN 363

Query: 533 ME--KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVN 590
            E  +RDVS+W   I    + G+G++A+ELF+ M  +G++P+ I F  +L+ACSH GL++
Sbjct: 364 CELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLID 423

Query: 591 QGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
           +G   F  MT +  V P++ HY CMVD+LGRAG L EA  LIK +P  P+D +WG+LL A
Sbjct: 424 EGRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLA 482

Query: 651 CQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLP 710
           C+ H N ++   AA  + +L+PE +G +VL+SNIYA++ KW  V  VR  MK +G++K  
Sbjct: 483 CRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPA 542

Query: 711 GSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKK 770
             S IE   +VH F + D+S P    +   +  +   ++  GYVPDL+ VL DV+ ++K+
Sbjct: 543 AFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKE 602

Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
           +LL++HSEKLA+AFG++   + MPI+V KNLR+C DCH   K +S +Y R+IIVRD NRF
Sbjct: 603 HLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRF 662

Query: 831 HFFRQGSCSCSDFW 844
           H F+ G CSC D+W
Sbjct: 663 HHFQGGRCSCGDYW 676



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 152/554 (27%), Positives = 263/554 (47%), Gaps = 77/554 (13%)

Query: 12  LATPTVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHCHILKQG-LGHKPSYISK 69
           L +  +  L++ HK    P        L + C +L  LK  H  +  +G L H P ++++
Sbjct: 4   LKSRALHHLSHTHKVLALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLAR 63

Query: 70  VVCTCAQMGTFESLTYAQKAFDYYIKDNET---SATLFMYNSLIRGYSCIGLGVEAISLY 126
           ++   +++G   S   A+  FD+    +     +   F+ N+++R Y+  G   EAI LY
Sbjct: 64  LIILYSKLGDLHS---ARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLY 120

Query: 127 VELAGFGILPDKFTFPFVLNACTKS--SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
           + +   G+  + FT+PFVL  C     + FGE   VHG +V+ GF  D+FVE  L++ Y 
Sbjct: 121 IYMQRMGVGVNNFTYPFVLKVCASELGAVFGE--VVHGQVVRTGFGSDLFVEAALVDMYA 178

Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC 244
           +CG+I D   VFD M  R+VV WT++I    + + P +A+ LF +M EEG   + +T + 
Sbjct: 179 KCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAIS 238

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           V SA  +L +  +                               A+  A+ +F   ++RN
Sbjct: 239 VASAVGQLGDGRM-------------------------------AISRARLVFDRMEERN 267

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
            +  N+++S Y + G   +AL++ ++M      P+ VT L  VSA + LG    GR  H 
Sbjct: 268 GISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHN 327

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH--MSNKTVVSWNSLIAGLIKNGDV 422
           +V+ + ++   ++ N ++DMYMKCG  + A  +F++  +  + V SWN LI+G   +G  
Sbjct: 328 FVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGH- 386

Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
                      G++                   A+ELF  M  E ++ + +T   + SAC
Sbjct: 387 -----------GKE-------------------ALELFSRMQVEGVEPNDITFTSILSAC 416

Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV-SAW 541
            + G +D  +  +A + K  +  +M+    +VDM  R G    A ++ +++  R     W
Sbjct: 417 SHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVW 476

Query: 542 TAAIGAMAMEGNGE 555
            A + A  + GN E
Sbjct: 477 GALLLACRIHGNTE 490


>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/618 (34%), Positives = 359/618 (58%), Gaps = 3/618 (0%)

Query: 136 PDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRV 195
           P   T  ++++ C    +  +   VH  I+  G    V     L++   +  D+    ++
Sbjct: 34  PTHQTLHYLIDQCI---SLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKL 90

Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
           FD++ + N   +  LI   +    P +++ L+  MV +GI PN  T+  V+ ACA     
Sbjct: 91  FDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCY 150

Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
            LG  V A   +LGM ++A + NA++++Y+ CG + +A+++F +  +R LV  N++++ Y
Sbjct: 151 WLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGY 210

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
            ++G + EA+ +  EM   G  PD  T++  +S S + G+   GR  H +++  G+E   
Sbjct: 211 SKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDS 270

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + N ++DMY KCG  + A  +FD M +K VVSW  +I     +G ++ A E F++MPG+
Sbjct: 271 IVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGK 330

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
           + +SWN+++    QE ++ EA++LF  M    +  +  T+V + S+C ++G L L K  +
Sbjct: 331 NVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAH 390

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           +YI  N I     L  A++DM+A+CG  Q AM VF  M +++  +W   IGA+A+ G G+
Sbjct: 391 SYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGK 450

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           +A+E+F +M   G+ PD I F G+L+ACSH GLV+ G H F  M    G+SP + HY CM
Sbjct: 451 EAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACM 510

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           VDLLGR GLLGEA+ LIK MPV+P+ V+W +LL AC+ + N+ I     +++ EL    S
Sbjct: 511 VDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNS 570

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G++VLLSN+Y+ + +W ++  +   + + GI+K    S IE++G  ++F   D+ H    
Sbjct: 571 GLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGAST 630

Query: 736 NISSMLREMNCRLRDAGY 753
           +I SML ++   L+ AGY
Sbjct: 631 SIYSMLGQLMDHLKSAGY 648



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 171/563 (30%), Positives = 274/563 (48%), Gaps = 72/563 (12%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
           +  C +L +LK  H  I+  GL  +   + K+V +  Q+     L YA K FD   + N+
Sbjct: 43  IDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQL---RDLRYAHKLFDQIPQPNK 99

Query: 99  TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
                FM+N LI+GYS     ++++ LY  +   GILP++FT PFVL AC   S +  GV
Sbjct: 100 -----FMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGV 154

Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
            VH    K+G      V+N ++N Y  CG I   RRVFD++SER +VSW S+I   ++  
Sbjct: 155 CVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMG 214

Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
             +EAV +F EM E G++P+  T+V ++S   K  N +LG  V  ++   G++ ++++ N
Sbjct: 215 RSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTN 274

Query: 279 ALVDMYMKCGAVDTAKQLFGECKD-------------------------------RNLVL 307
           AL+DMY KCG +  AK +F +  D                               +N+V 
Sbjct: 275 ALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVS 334

Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
            N+I+  +V+ GL  EA+ +   M   G   +  T+++ +S+ + +GDL  G+  H Y+ 
Sbjct: 335 WNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIF 394

Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
            N +    ++CN +IDMY KCG  + A  +F  M  K  VSWN +I              
Sbjct: 395 DNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVII-------------- 440

Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
                            G L      +EA+E+F  M +  +  D +T  G+ SAC + G 
Sbjct: 441 -----------------GALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGL 483

Query: 488 LDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
           +D  +  +  +    GI  D++    +VD+  R G    A+ + ++M  K DV  W+A +
Sbjct: 484 VDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALL 543

Query: 546 GAMAMEGNGEQAVELFNEMLRQG 568
           GA    GN     ++  ++L  G
Sbjct: 544 GACRTYGNLAIGKQIMKQLLELG 566


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/599 (36%), Positives = 337/599 (56%), Gaps = 32/599 (5%)

Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
           +I+ACA+ ++L+    + A++       +  + N+L+ +Y KCGAV  A+++F     R+
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
           +    ++++ Y +  +  EAL +L  ML    +P+  T  S + A+        G   H 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
             ++        + + ++DMY +CG+ +MA  +FD + +K              NG    
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK--------------NG---- 231

Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
                        +SWN ++ G  ++   E  + +F  M     +    T   V SA   
Sbjct: 232 -------------VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAG 278

Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
           +GAL+  KW++A++ K+G      +   ++DM+A+ G    A +VF R++K+DV  W + 
Sbjct: 279 IGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSM 338

Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
           + A A  G G +AV  F EM + G+  + I F+ +LTACSHGGLV +G   F  M + + 
Sbjct: 339 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YN 397

Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
           + P+I HY  +VDLLGRAGLL +AL  I  MP++P   +WG+LL +C+ H+N  I  +AA
Sbjct: 398 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAA 457

Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
           + + ELDP+ +G  VLL NIYAS G+W   ARVR  MK  G++K P  S +E+   VH F
Sbjct: 458 DHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMF 517

Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
            + D++HP    I     E++ ++R AGYVP+   VLL VDEQE++  L +HSEK+A+AF
Sbjct: 518 VANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAF 577

Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDF 843
            LI+      IR++KN+R+C DCHS  + +SKV+ REI+VRD NRFH F  GSCSC D+
Sbjct: 578 ALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 193/413 (46%), Gaps = 32/413 (7%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           ++ AC +  +  +   +H  +    F   VF++N LI+ Y +CG + D RRVFD M  R+
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           + SWTSLI   A+ D+P EA+ L   M+    KPN  T   ++ A     +  +G+++ A
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
              +     +  + +AL+DMY +CG +D A  +F + + +N V  N +++ + R G    
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
            L +  EM  +G      T  S  SA A +G L  G+  H +++++G      + NT++D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY K G    A ++FD +  K VV+WNS                               M
Sbjct: 310 MYAKSGSMIDARKVFDRVDKKDVVTWNS-------------------------------M 338

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           L    Q  +  EA+  F  M    + ++++T + + +AC + G +   K  +  +++  +
Sbjct: 339 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNL 398

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIGAMAMEGNGE 555
             ++     +VD+  R G    A+    +M  +  +A W A +G+  M  N +
Sbjct: 399 EPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 451



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 1/309 (0%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           + SLI GY+   +  EA+ L   +      P+ FTF  +L A   S++ G G Q+H   V
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
           K  +  DV+V + L++ Y  CG +     VFD++  +N VSW +LI   AR+   +  + 
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252

Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
           +F EM   G +    T   V SA A +  LE G  V A++ + G + +A + N ++DMY 
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312

Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
           K G++  A+++F     +++V  N++++ + + GL REA+   +EM   G   +++T LS
Sbjct: 313 KSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 372

Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG-KQEMACRIFDHMSNK 404
            ++A +  G +  G+     +    LE       T++D+  + G   +    IF      
Sbjct: 373 ILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKP 432

Query: 405 TVVSWNSLI 413
           T   W +L+
Sbjct: 433 TAAVWGALL 441


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 260/822 (31%), Positives = 417/822 (50%), Gaps = 56/822 (6%)

Query: 32  DSPSIGS-LKNCKTLNE---LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
           DS + G+ L+ C   N+    K  HC ILK+G          +  T   +  +    + +
Sbjct: 48  DSHAYGAMLRRCIQKNDPISAKAIHCDILKKG------SCLDLFATNILLNAYVKAGFDK 101

Query: 88  KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVL 145
            A + + +  E +   F+  +L +GY+C     + I LY  L   G  + P  FT    L
Sbjct: 102 DALNLFDEMPERNNVSFV--TLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKL 155

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
                 +       +H  IVK+G+D + FV   LIN Y  CG +   R VF+ +  +++V
Sbjct: 156 FVSLDKAEICP--WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIV 213

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
            W  ++         ++++ L   M   G  PN+ T    + A   L   +    V   I
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQI 273

Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
            +     +  +   L+ +Y + G +  A ++F E    ++V  + +++ + + G   EA+
Sbjct: 274 LKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAV 333

Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
            +   M      P+  T+ S ++  A       G   HG V++ G +    + N +ID+Y
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393

Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
            KC K + A ++F                               +E+  ++ +SWNT++ 
Sbjct: 394 AKCEKMDTAVKLF-------------------------------AELSSKNEVSWNTVIV 422

Query: 446 GLTQENMFE--EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
           G   EN+ E  +A  +FR  L  ++ V  VT      AC  L ++DL   ++    K   
Sbjct: 423 GY--ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN 480

Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
              + ++ +L+DM+A+CGD + A  VF  ME  DV++W A I   +  G G QA+ + + 
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540

Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
           M  +  KP+ + F+GVL+ CS+ GL++QG   F SM   HG+ P + HY CMV LLGR+G
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSG 600

Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
            L +A+ LI+ +P EP+ +IW ++L+A     N + A  +AE I +++P+    +VL+SN
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSN 660

Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
           +YA A +W NVA +R  MKE G++K PG S IE  G VH F+ G   HP+M  I+ ML  
Sbjct: 661 MYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEW 720

Query: 744 MNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS-TSKTMPIRVVKNLR 802
           +N +   AGYVPD   VLLD+D++EK   L  HSE+LA+A+GL+   S    I ++KNLR
Sbjct: 721 LNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLR 780

Query: 803 LCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           +C DCHS  K++S +  R++++RD NRFH F  G CSC D W
Sbjct: 781 ICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/643 (35%), Positives = 352/643 (54%), Gaps = 34/643 (5%)

Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
           R +  W S +  C   D  +EAV L   + + G    +  +  +I  CA  + LE G R+
Sbjct: 7   RAITKWLSPVLECGGVDAIREAVDL---LEQSGAAGGTGDLEQLIRRCAGAKALEEGRRI 63

Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
             ++D   +     + N LVDMY KCG++  AK++F   + +N+     +M+ +V+ G  
Sbjct: 64  HRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRG 123

Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
            EA+ +   M   G  PDRV +L  + +      L  GR  H      G++      N +
Sbjct: 124 VEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAI 183

Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           I+MY KCG                                +  A  VF+ MP ++ ISW+
Sbjct: 184 INMYGKCGS-------------------------------IGEAFAVFTRMPEKNVISWS 212

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
           TM+    Q  + +EA+  F++M  E +++DR+T V V  A   +GAL+L K ++  I   
Sbjct: 213 TMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYA 272

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
           G+   + +   LV+M+ +CG P  A  VF  M +++V +W A + A    G   +A+ LF
Sbjct: 273 GLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALF 332

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           + M  +G++P+ I FV +L  CSH G        F  M    G++P+ VH+GC++D+LGR
Sbjct: 333 DSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGR 392

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           +G L EA +LI++MPV  + V+W SLL AC  H++ D AA AAE   + +P  +  +++L
Sbjct: 393 SGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIML 452

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           SN+YA+  KW   A+VR +M++ G+RK  G S IE++ +VHEF +GD  HP+ + I   L
Sbjct: 453 SNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTL 512

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
           + +   +R  GY PD   V+  ++E+EK  +L +HSEKLA+AFG+ ST    P+ +VKNL
Sbjct: 513 QRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNL 572

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCHS  K +S V  R I VRD+NRFH F +G CSC D+W
Sbjct: 573 RVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 194/406 (47%), Gaps = 33/406 (8%)

Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           ++  C  + A  EG ++H  +     DR  F+ N L++ YG+CG +V+ +RVFD M  +N
Sbjct: 47  LIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKN 106

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           V SWT L+    +     EA+ LF  M +EG  P+ V ++  I +C   + L  G  + +
Sbjct: 107 VFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHS 166

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
                GM ++ +  NA+++MY KCG++  A  +F    ++N++  +T+++ + +  LA E
Sbjct: 167 AAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADE 226

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL     M   G   DR+T +S + A   +G L  G+  H  ++  GL+    + NT+++
Sbjct: 227 ALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVN 286

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG  + A  +FD M  K VVSWN+++A   +NG                       
Sbjct: 287 MYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRS--------------------- 325

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-G 502
                      EA+ LF  M  E ++ + +T V +   C + G    A   +  + ++ G
Sbjct: 326 ----------REALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFG 375

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
           I         L+DM  R G  + A ++ + M    D   WT+ + A
Sbjct: 376 ITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCA 421



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 193/383 (50%), Gaps = 18/383 (4%)

Query: 43  KTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
           K L E ++ H   +  G   +P ++S ++      G   SL  A++ FD     N     
Sbjct: 55  KALEEGRRIH-RWMDSGTLDRPRFLSNLLVD--MYGKCGSLVEAKRVFDAMQHKN----- 106

Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           +F +  L+ G+   G GVEAI L+  +   G LPD+      +++C  + A  +G ++H 
Sbjct: 107 VFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHS 166

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
           A    G D D+   N +IN YG+CG I +   VF  M E+NV+SW+++I A  + +L  E
Sbjct: 167 AAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADE 226

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           A+  F  M +EG++ + +T V V+ A   +  LELG  +   I   G+  + ++ N LV+
Sbjct: 227 ALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVN 286

Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR-- 340
           MY KCG+ D A+ +F    ++N+V  N +++ Y + G +REALA+ D M L G RP+   
Sbjct: 287 MYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDIT 346

Query: 341 -VTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQEMACRI 397
            VT+L   S S +  D +     H   +R   G+   +     +IDM  + GK E A  +
Sbjct: 347 FVTILYCCSHSGKFKDAV----SHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEEL 402

Query: 398 FDHMS-NKTVVSWNSLIAGLIKN 419
              M      V W SL+   + +
Sbjct: 403 IQAMPVPADAVLWTSLLCACVTH 425


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/700 (33%), Positives = 377/700 (53%), Gaps = 34/700 (4%)

Query: 147 ACTKSSAFGEGVQVHGAIVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
           A  K+  FG  +  H  I    + D  V   N LIN Y +C ++   R++FD M  RNVV
Sbjct: 30  ADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVV 89

Query: 206 SWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
           SW++L+    +   P E   LF +MV ++ I PN   +   IS+C     +E G +   Y
Sbjct: 90  SWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GKQCHGY 148

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREA 324
             + G++ +  + NAL+ +Y KC  V  A Q+       ++   N +++  ++     EA
Sbjct: 149 ALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEA 208

Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
           + +L  ++  G   +  T ++     A L D+  G+  H  +L++ ++    I +++IDM
Sbjct: 209 VDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDM 268

Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
           Y KCG                               +V S R  F  +  R+ +SW +++
Sbjct: 269 YGKCG-------------------------------NVLSGRTFFDRLQSRNVVSWTSII 297

Query: 445 GGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIH 504
               Q   FEEA+ LF  M  + I  +  TM  + ++   L AL L   ++A  EK+G+ 
Sbjct: 298 AAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLK 357

Query: 505 CDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM 564
            ++ +  AL+ M+ + GD   A  VF  M   ++  W A I   +  G G++A+ +F +M
Sbjct: 358 GNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDM 417

Query: 565 LRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGL 624
           +  G +P+ + F+GV+ AC+H  LV++G++ F  +     + P + HY C+V LL R+G 
Sbjct: 418 MATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGR 477

Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNI 684
           L EA + ++S  +  + V W +LL AC  H++ D     AE + +L+P   G ++LLSN+
Sbjct: 478 LDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNM 537

Query: 685 YASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREM 744
           +A   +W +V  +R  M+E+ ++K PG S +E+    H FTS D  HPE N I   ++++
Sbjct: 538 HARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDL 597

Query: 745 NCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLC 804
             ++R  GYVPD+ NVL D+++++K   LS+HSEKLA+A+GL+ T    PI V+KNLR+C
Sbjct: 598 LSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMC 657

Query: 805 CDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
            DCH+  KL+SKV +R I+VRD NRFH F+ G CSC D+W
Sbjct: 658 DDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 206/435 (47%), Gaps = 27/435 (6%)

Query: 47  ELKQPHCHILKQGL---GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           E KQ H + LK GL    +  + + ++   C+ +G    + Y     D           +
Sbjct: 141 EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGND-----------I 189

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGA 163
           F YN ++ G        EA+ +   +   GI  +  T+  +   C        G QVH  
Sbjct: 190 FCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQ 249

Query: 164 IVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
           ++K   D DV++ + +I+ YG+CG+++ GR  FD +  RNVVSWTS+I A  + +  +EA
Sbjct: 250 MLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEA 309

Query: 224 VYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDM 283
           + LF +M  + I PN  TM  + ++ A L  L LGD++ A  ++ G+K N ++ NAL+ M
Sbjct: 310 LNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIM 369

Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
           Y K G +  A+ +F      N++  N I++ +   GL +EAL++  +M+  G RP+ VT 
Sbjct: 370 YFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTF 429

Query: 344 LSAVSASAQL-----GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
           +  + A A L     G      +   + +  GLE +  I    + +  + G+ + A    
Sbjct: 430 IGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCI----VGLLSRSGRLDEAENFM 485

Query: 399 -DHMSNKTVVSWNSLIAGLIKNGDVESAR---EVFSEMPGRDHISWNTMLGGLTQENMFE 454
             H  N  VVSW +L+     +   +  R   E   ++  RD  ++  +     +   ++
Sbjct: 486 RSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWD 545

Query: 455 EAMELFRVMLSERIK 469
             +E+ ++M    +K
Sbjct: 546 HVVEIRKLMRERNVK 560


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/703 (34%), Positives = 367/703 (52%), Gaps = 34/703 (4%)

Query: 145 LNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
           L +C ++     G  +H  +V  G      F+ N LI  Y  C D+    R+FD M   N
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
           +VSWT+L+    +  + ++A+  F  M   G+ P    +     A A L     G ++  
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
               LG  A   + + L DMY K G +  A ++F +   ++ V    ++  Y + G    
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 324 ALAILDEMLLHG-PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
           A+    +M   G    D+  + S +SAS  L D    R  H  V+++G E   ++ N + 
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALT 263

Query: 383 DMYMKCGKQEMACRIFD-HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
           DMY K    + A R+      +  VVS  SLI G I                        
Sbjct: 264 DMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYI------------------------ 299

Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
                  + +  E+A+ +F  +  + ++ +  T   +   C     L+    ++A + K 
Sbjct: 300 -------ETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKT 352

Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
            +  D  +++ L+DM+ +CG    ++Q+F+ +E     AW AAI  +A  G+G +A+  F
Sbjct: 353 SLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAF 412

Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
           + M   GI+P+ I FV +LTACSH GLV++G   F SM D HG+ P+  HY C++D+ GR
Sbjct: 413 DRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGR 472

Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
           AG L EA   I  MPV+PN   W SLL AC+   N ++   AA+ + +L+P+ +GVHV L
Sbjct: 473 AGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSL 532

Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
           S IYAS G+W +V  VR  M++  I+KLPG S ++ N K H F S D SHP+   I   L
Sbjct: 533 SGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKL 592

Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
            E+  R+++ GYVPD   +  ++++  K+ +L +HSE++A+AF LIS   T PI V KNL
Sbjct: 593 EELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNL 652

Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+C DCHS  K +SKV +R+IIVRDN+RFH F +G CSC D+W
Sbjct: 653 RICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 228/492 (46%), Gaps = 42/492 (8%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A + FD   + N     L  + +L+ G +   +  +A++ +  +   G++P +F      
Sbjct: 72  AVRLFDAMPRPN-----LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAA 126

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
            A    +A   G Q+H   V++GFD ++FV + L + Y + G +V+  RVFD+M +++ V
Sbjct: 127 RAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAV 186

Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVC-VISACAKLQNLELGDRVCAY 264
           +WT++I   A+    + AV  F +M  EG+      ++C V+SA   L++  L   + + 
Sbjct: 187 AWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSC 246

Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFG-ECKDRNLVLCNTIMSNYVRLGLARE 323
           + + G +    + NAL DMY K   +D A ++   +    N+V   +++  Y+      +
Sbjct: 247 VMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEK 306

Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
           AL +  E+   G  P+  T  S +   A    L  G   H  V++  L     + +T++D
Sbjct: 307 ALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLD 366

Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
           MY KCG   ++ ++F  +   T ++WN+ I  L ++G             GR        
Sbjct: 367 MYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGH------------GR-------- 406

Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNG 502
                      EA+  F  M S  I+ + +T V + +AC + G +D   K+ Y+  + +G
Sbjct: 407 -----------EAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHG 455

Query: 503 IHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELF 561
           I    +  + ++DM+ R G    A +    M  K +   W + +GA  M GN E      
Sbjct: 456 IEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAA 515

Query: 562 NEMLRQGIKPDS 573
           + M++  ++PD+
Sbjct: 516 DNMMK--LEPDN 525



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 14/261 (5%)

Query: 53  CHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF-DYY------------IKDNET 99
           C +L    G K  ++++ + +C     FE     + A  D Y            +K ++ 
Sbjct: 225 CSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQG 284

Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
           S  +    SLI GY       +A+ +++EL   G+ P++FTF  ++  C   +   +G Q
Sbjct: 285 SLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQ 344

Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
           +H  ++K     D FV + L++ YG+CG I    ++F E+     ++W + I   A+   
Sbjct: 345 LHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGH 404

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR-VCAYIDELGMKANALMVN 278
            +EA+  F  M   GI+PN +T V +++AC+    ++ G +   +  D  G++      +
Sbjct: 405 GREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYS 464

Query: 279 ALVDMYMKCGAVDTAKQLFGE 299
            ++DMY + G +D A++  GE
Sbjct: 465 CIIDMYGRAGRLDEAEKFIGE 485


>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
          Length = 669

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/538 (41%), Positives = 314/538 (58%), Gaps = 38/538 (7%)

Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
           G  P  + +     + A    L+ GR  H    R GL+G   + ++ I MY +CG+ + A
Sbjct: 7   GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDA 66

Query: 395 CRIFDHMSNKTVVSWNSLIAGLIKNG---------------------------------- 420
            ++F+ M  + VVSWN++I+G    G                                  
Sbjct: 67  YQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK 126

Query: 421 ----DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
               D+   + VF EM  +  ISWN ML   T   M  EA+ELF  M  + I+ D VT+ 
Sbjct: 127 ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLA 186

Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
            V  +CG + AL L K I+  I++  +   M L  AL+DM+A CG  + A  VF  M  R
Sbjct: 187 TVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTR 246

Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
           DV +WT+ I A    G+G +A++LF +M  QG++PDSI FV +L ACSH GL++ G H F
Sbjct: 247 DVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYF 306

Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
            SMT    ++P++ HY CMVDLLGRAG + EA D I  MP++PN+ +WG+LL AC+ H N
Sbjct: 307 YSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSN 366

Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIE 716
           +DI   AA+ +  L P+++G +VLLSNIYA AG+W +V+ VR  M+ +GI+KLPG S+ E
Sbjct: 367 MDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAE 426

Query: 717 VNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHH 776
           +  +VH F  GD SHP+   I   L E+  R+R+ GY P++   L DV+E++K+  LS H
Sbjct: 427 LGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVH 486

Query: 777 SEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFR 834
           SEKLA+AF LI+T+   PIR+  NLR C DCH  AKL+S +  REII++D NR H+ +
Sbjct: 487 SEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 544



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 191/443 (43%), Gaps = 67/443 (15%)

Query: 131 GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIV 190
           G G+LP     P    +C  +     G Q+H +  ++G D +VFV +  I+ Y  CG   
Sbjct: 5   GPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPD 64

Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNSVTMVCVISAC 249
           D  ++F+EM  R+VVSW ++I   A   L   A+ +F E+V  +  KP++ TM  ++ + 
Sbjct: 65  DAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSM 124

Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
            K           A ++++ +                       K +F E + + L+  N
Sbjct: 125 GK-----------ARVEDIAL----------------------LKGVFDEMRFKGLISWN 151

Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
            +++ Y    +  EA+ +   M   G  PD VT+ + + +  ++  L  G+  H  + R 
Sbjct: 152 AMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRR 211

Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
            +     + N ++DMY  CG  + A  +FD M  + VVSW S+I+   ++G         
Sbjct: 212 RMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGH-------- 263

Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
               GR                   EA++LF  M  + ++ D +  V + +AC + G LD
Sbjct: 264 ----GR-------------------EAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLD 300

Query: 490 LAK-WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
           + K + Y+   +  I   ++    +VD+  R G  + A      M  K +   W A +GA
Sbjct: 301 MGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGA 360

Query: 548 MAMEGNGEQAVELFNEMLRQGIK 570
             +  N +  +   + +LR   K
Sbjct: 361 CRIHSNMDIGLLAADSLLRLAPK 383


>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
 gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
          Length = 592

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/607 (37%), Positives = 336/607 (55%), Gaps = 72/607 (11%)

Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA-------REALAILDEM 331
           AL+ +++   ++  AKQ+        +   + +++ ++   LA       R A+A+L  +
Sbjct: 17  ALLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLSRL 76

Query: 332 LLHGPR-------------------------------PDRVTMLSAVSASAQLGDLLCGR 360
           L HGP                                PD  T    + A A+L  L  G 
Sbjct: 77  LPHGPLDPFPLNTVLRIAAGSPRPRVALELHRRRLALPDTHTYPPLIQACARLLALREGE 136

Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
             H    +NG      + N+++ +Y  CG       +F                      
Sbjct: 137 CLHAEAAKNGFVTLVFVQNSLVHLYGACG-------LF---------------------- 167

Query: 421 DVESAREVFSEMP--GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
             ESA +VF EMP  GR+ +SWN+ML          E + +F  ML      D  T+V V
Sbjct: 168 --ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSV 225

Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRD 537
            +AC   GAL L + ++ Y+EK G+  +  ++ AL+D++A+CG    A ++F  M   R 
Sbjct: 226 LTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRT 285

Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
           V +WT+ I  +A  G G++A+ELF+ M R+ + P  I  VGVL ACSH GLV+ G+  F 
Sbjct: 286 VVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFD 345

Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
            M + +G+SP+I H GCMVDLLGRAG + EA D I +MP+EPN V+W +LL +C  H+ +
Sbjct: 346 RMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKL 405

Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
           ++   A ER+ ELDP  SG +VLLSN+YA+ G W +V  +R  M +  +RK PG S +E+
Sbjct: 406 ELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVEL 465

Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHS 777
              V+EF  GD SHPE   I  ML E+  RLR  GY+P  +NVL D++E+EK+  L++HS
Sbjct: 466 RNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHS 525

Query: 778 EKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGS 837
           E+LA+AF L+ +   +PIR++KNLR+C DCH    L+SKVYDREIIVRD +RFH F+ G+
Sbjct: 526 ERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGA 585

Query: 838 CSCSDFW 844
           CSC D+W
Sbjct: 586 CSCKDYW 592



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 203/442 (45%), Gaps = 29/442 (6%)

Query: 44  TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATL 103
           +L   KQ H   L+ G+      ++K +           L YA       +         
Sbjct: 27  SLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDP-- 84

Query: 104 FMYNSLIRGYSCIGLGVEAISLYVELAGFGI-LPDKFTFPFVLNACTKSSAFGEGVQVHG 162
           F  N+++R    I  G     + +EL    + LPD  T+P ++ AC +  A  EG  +H 
Sbjct: 85  FPLNTVLR----IAAGSPRPRVALELHRRRLALPDTHTYPPLIQACARLLALREGECLHA 140

Query: 163 AIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS--ERNVVSWTSLICACARRDLP 220
              K GF   VFV+N L++ YG CG      +VFDEM    RN+VSW S++ + A    P
Sbjct: 141 EAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRP 200

Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNAL 280
            E + +F+EM+     P+  T+V V++ACA+   L LG RV  Y++++G+  N+ + NAL
Sbjct: 201 NEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNAL 260

Query: 281 VDMYMKCGAVDTAKQLFGECK-DRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
           +D+Y KCG+V+ A+++F E    R +V   +++      G  +EAL +   M      P 
Sbjct: 261 IDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPT 320

Query: 340 RVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMA 394
            +TM+  + A +  G +  G     RM   Y +   +E        M+D+  + G+ E A
Sbjct: 321 EITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEH----LGCMVDLLGRAGRVEEA 376

Query: 395 CRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEM----PGR--DHISWNTMLGGL 447
                 M      V W +L+     +  +E  +  +  +    PG   D++  + +   +
Sbjct: 377 YDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAV 436

Query: 448 TQENMFEEAMELFRVMLSERIK 469
               M+ +   L + M+ +R++
Sbjct: 437 ---GMWADVHVLRKTMVKDRVR 455



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 137/304 (45%), Gaps = 24/304 (7%)

Query: 5   LNPSPL------VLATPTVTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQPHC---H 54
           L+P PL         +P        H+ +    D+ +   L + C  L  L++  C    
Sbjct: 82  LDPFPLNTVLRIAAGSPRPRVALELHRRRLALPDTHTYPPLIQACARLLALREGECLHAE 141

Query: 55  ILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYS 114
             K G        + +V      G FES   A K FD   +       L  +NS++  ++
Sbjct: 142 AAKNGFVTLVFVQNSLVHLYGACGLFES---AHKVFD---EMPVRGRNLVSWNSMLNSFA 195

Query: 115 CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF 174
             G   E ++++ E+ G    PD FT   VL AC +  A   G +VH  + K+G   +  
Sbjct: 196 ANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSH 255

Query: 175 VENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACARRDLPKEAVYLFFEMVEE 233
           V N LI+ Y +CG + D RR+F+EM   R VVSWTSLI   A     KEA+ LF  M  E
Sbjct: 256 VSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMERE 315

Query: 234 GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL----GMKANALMVNALVDMYMKCGA 289
            + P  +TMV V+ AC+    ++ G R   Y D +    G+      +  +VD+  + G 
Sbjct: 316 KLVPTEITMVGVLYACSHCGLVDDGFR---YFDRMKEDYGISPRIEHLGCMVDLLGRAGR 372

Query: 290 VDTA 293
           V+ A
Sbjct: 373 VEEA 376


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/594 (38%), Positives = 335/594 (56%), Gaps = 32/594 (5%)

Query: 252 LQNLELGDRVCAY-IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
           L   +LGD   A  + E   + N +  N L   Y+K G +  A++LF E  +RN+   N 
Sbjct: 146 LAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNA 205

Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
           +++    LG   E+L    +M   G  PD   + S     A L D++ GR  H YV+R+G
Sbjct: 206 MVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG 265

Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
           L+    + +++  MYM+CG     C                          ++    V  
Sbjct: 266 LDRDMCVGSSLAHMYMRCG-----C--------------------------LQEGEAVLR 294

Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
            +P    +S NT++ G TQ    E A+E F +M S  +  D VT V   S+C  L AL  
Sbjct: 295 MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQ 354

Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
            + I+  + K G+   + + T LV M++RCG    + +VF      D    +A I A   
Sbjct: 355 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGF 414

Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
            G+G++A+ELF +M+  G +P  + F+ +L ACSH GL  +G   F  MT  +G+ P + 
Sbjct: 415 HGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVK 474

Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
           HY C+VDLLGR+G L EA  LI SMP+ P+ VIW +LL+AC+  +N D+A   A+R+ EL
Sbjct: 475 HYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIEL 534

Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
           DP  S  +VLLSNI A++ +W +V+ VR  M++  +RK PG S +E+ G +H+F +GDES
Sbjct: 535 DPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDES 594

Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
           HP    I   L EM  ++R  GY PD++ VL D++++EK+  LSHHSEKLA+AF  +S  
Sbjct: 595 HPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLP 654

Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           + +PIRV+KNLR+C DCH   KL+S+V  REI+VRD +RFH F+ G CSC D+W
Sbjct: 655 EGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 146/297 (49%), Gaps = 4/297 (1%)

Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
           R+V   N L   Y + GD+   R++FDEM ERNV +W +++         +E++  F +M
Sbjct: 167 RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDM 226

Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
             EG+ P+   +  V   CA L+++  G +V AY+   G+  +  + ++L  MYM+CG +
Sbjct: 227 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCL 286

Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
              + +       ++V CNTI++   + G +  AL     M   G   D VT +SA+S+ 
Sbjct: 287 QEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC 346

Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
           + L  L  G+  HG V++ G++    +   ++ MY +CG    + R+F           +
Sbjct: 347 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 406

Query: 411 SLIAGLIKNGDVESAREVFSEM----PGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
           ++I+    +G  + A E+F +M         +++  +L   +   + EE M+ F +M
Sbjct: 407 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 463



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 31/343 (9%)

Query: 39  LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY------ 92
            + C+ L  L+Q H      G        + ++   A +G    LT A++ F+       
Sbjct: 113 FRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLG---DLTAARELFERIPRRNV 169

Query: 93  ---------YIKDNETSAT--LF---------MYNSLIRGYSCIGLGVEAISLYVELAGF 132
                    YIK+ +      LF          +N+++ G + +G   E++  ++++   
Sbjct: 170 MSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRRE 229

Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
           G+ PD+F    V   C        G QVH  +V+ G DRD+ V + L + Y  CG + +G
Sbjct: 230 GMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEG 289

Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
             V   +   ++VS  ++I    +    + A+  F  M   G+  + VT V  IS+C+ L
Sbjct: 290 EAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDL 349

Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV-DTAKQLFGECKDRNLVLCNTI 311
             L  G ++   + + G+     ++  LV MY +CG + D+ +  FG C     +L + +
Sbjct: 350 AALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL-SAM 408

Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
           +S Y   G  ++A+ +  +M+  G  P  VT L+ + A +  G
Sbjct: 409 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSG 451



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 10/182 (5%)

Query: 35  SIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
           +I S  +   L + +Q H  ++K G+      ++ +V   ++ G    L  +++ F  Y 
Sbjct: 342 AISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGC---LGDSERVFFGYC 398

Query: 95  KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
             +      F+ +++I  Y   G G +AI L+ ++   G  P   TF  +L AC+ S   
Sbjct: 399 GSDT-----FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLK 453

Query: 155 GEGVQVHGAIVKM-GFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLIC 212
            EG+     + K  G    V    C+++  G  G + +   +   M    + V W +L+ 
Sbjct: 454 EEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 513

Query: 213 AC 214
           AC
Sbjct: 514 AC 515


>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
          Length = 611

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/589 (38%), Positives = 344/589 (58%), Gaps = 47/589 (7%)

Query: 269 GMKANALMVNALVDMYMKCGA-----VDTAKQLFGECKDR-NLVLCNTIMSNYVRLGL-- 320
           G++A+   V  L+ +  + GA     +  A+Q+F       ++V  NT++  Y R G   
Sbjct: 57  GLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGWGG 116

Query: 321 --AREALAILDEMLLHGPRPDRVTMLSAVSA--SAQLGDLLCGRMCHGYVLRNGLEGWDS 376
             A EA  +   M+  G  PD  T +S + A  SA+ G+   GR  HG  ++ G    + 
Sbjct: 117 GCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEE--GRQAHGVAVKAGAAEHEY 174

Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
           +  T+I+MY +CG                               DV +AR +F  M G  
Sbjct: 175 VAPTLINMYAECG-------------------------------DVRAARVMFDRMDGEC 203

Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
            +S+N M+    + ++  EA+ LFR M ++ +K   VT++ V SAC  LGAL+L +WI+ 
Sbjct: 204 VVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHD 263

Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
           YI K  +   +++ TAL+DM+A+CG  + A+ VF+ ME RD  AW+  + A A  G G +
Sbjct: 264 YIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGRE 323

Query: 557 AVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMV 616
           A+ +F EM +QG+KPD + F+GVL ACSH G+V++G   F SM + +G+   I HYGC+ 
Sbjct: 324 AISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGCVT 382

Query: 617 DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSG 676
           DLL R+G L  A   I  +P++P  ++W +LL+AC  H +VD+     ERI ELD    G
Sbjct: 383 DLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGG 442

Query: 677 VHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNN 736
            +V+ SN+ A+ G+W  +  VR  M E+G+ K+PG SSIE++  VHEF +GD SHP    
Sbjct: 443 DYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQE 502

Query: 737 ISSMLREMNCRLRDAGYVPDLTNVL-LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
              M+ E+  +L+  GYVP+ ++V  +++ E+EK   L +HSEKLA++FGL++T+    +
Sbjct: 503 ARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTL 562

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           R+VKNLR+C DCHS AKLVS V++R II+RD NRFH F  G CSC D+W
Sbjct: 563 RIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 255/524 (48%), Gaps = 32/524 (6%)

Query: 3   LTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGH 62
           LT  PSPL+ A        +++        +P +  L +C +L  L Q H   +K G G 
Sbjct: 6   LTATPSPLLPAK-------SKNPPPHHHHHNPLLAYLPHCTSLRALAQLHAVAVKAGGGL 58

Query: 63  K--PSYISKVVCTCAQMGTFES--LTYAQKAFDYYIKDNETSATLFMYNSLIRGYS---- 114
           +  P+++++++  C + G      L YA++ FD      +    +  YN+L+RGY+    
Sbjct: 59  QAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGD----VVWYNTLLRGYARGGW 114

Query: 115 CIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF 174
             G   EA  ++V +   G+ PD +TF  +L AC  + A  EG Q HG  VK G     +
Sbjct: 115 GGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEY 174

Query: 175 VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG 234
           V   LIN Y ECGD+   R +FD M    VVS+ ++I A  R  LP EA+ LF EM  +G
Sbjct: 175 VAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKG 234

Query: 235 IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAK 294
           +KP SVT++ V+SACA L  LELG  +  YI ++ + +   +  AL+DMY KCG+++ A 
Sbjct: 235 LKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAI 294

Query: 295 QLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLG 354
            +F + + R+    + +M  Y   G  REA+++ +EM   G +PD VT L  + A +  G
Sbjct: 295 GVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSG 354

Query: 355 DLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLI 413
            +  G      +   G+         + D+  + G+ E A +  D +  K T + W +L+
Sbjct: 355 MVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLL 414

Query: 414 AGLIKNGDVESAREVFSEMPGRD--HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVD 471
           +    +GDV+  + VF  +   D  H     +   L       E M + R ++SE+    
Sbjct: 415 SACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEK---- 470

Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVD 515
                GV    G   ++++   ++ +   +G H   Q A  +VD
Sbjct: 471 -----GVVKVPG-CSSIEIDNMVHEFFAGDGSHPHSQEARRMVD 508


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 244/709 (34%), Positives = 375/709 (52%), Gaps = 42/709 (5%)

Query: 147 ACTKSSAFGEGVQVHGAIVKMGFDRDVFVE------NCLINFYGECGDIVDGRRVFDEMS 200
           A TK+  FG+ +     I         + E      N LIN Y +C  +   R +FDEMS
Sbjct: 23  ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82

Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
            R+VVS+  L+          E V LF  MV    +PN      V+SACA    +  G +
Sbjct: 83  LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142

Query: 261 VCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF----GECKDRNLVLC-NTIMSNY 315
              ++ + G+  +  + ++LV MY KC  VD A Q+     G   + N   C N++++  
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNAL 202

Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD 375
           V  G   EA+ +L  M+  G   D VT +S +    Q+ DL  G   H  +L+ GL    
Sbjct: 203 VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDV 262

Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
            + + ++DM+ KCG    A ++FD + N+ VV W SL+   ++NG+              
Sbjct: 263 FVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGE-------------- 308

Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
                            FEE + L   M  E    +  T   + +A   + AL     ++
Sbjct: 309 -----------------FEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLH 351

Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
           A +EK GI   + +  AL++M+++CG    +  VF  M  RD+  W A I   +  G G+
Sbjct: 352 ARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGK 411

Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCM 615
           QA+ LF +ML  G  P+ + FVGVL+AC+H  LVN+G++    +     V P + HY C+
Sbjct: 412 QALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCV 471

Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKS 675
           V +L RAG+L EA + +++  V+ + V W  LL AC  H+N ++    AE I ++DP   
Sbjct: 472 VAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDM 531

Query: 676 GVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMN 735
           G + LLSN+YA A  W +V  +R  M+E+ ++K PG S IE+   VH F+S   +HPE  
Sbjct: 532 GTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECI 591

Query: 736 NISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPI 795
            I + ++ +   ++  GYVP++  VL DV++++K+  L++HSEKLA+A+GL+      PI
Sbjct: 592 QIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPI 651

Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
           RV+KNLR+C DCH+  KL+SKV +R IIVRD +RFH FR G+C+C+D W
Sbjct: 652 RVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 226/468 (48%), Gaps = 38/468 (8%)

Query: 93  YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
           Y+ D  +  ++  YN L+ GY   G  +E + L+  +      P+++ F  VL+AC  S 
Sbjct: 76  YLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSG 135

Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM-----SERNVVSW 207
              EG+Q HG + K G     FV++ L++ Y +C  +    +V +       ++ +   +
Sbjct: 136 RVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCY 195

Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
            S++ A        EAV +   MV+EG+  +SVT V V+  C ++++L LG +V A + +
Sbjct: 196 NSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLK 255

Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
            G+  +  + + LVDM+ KCG V +A+++F   ++RN+V+  ++M+ Y++ G   E L +
Sbjct: 256 GGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNL 315

Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
           L  M   G   +  T    ++A A +  L  G + H  V + G++    + N +I+MY K
Sbjct: 316 LSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSK 375

Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
           CG  + +  +F  M N+ +++WN++I                                G 
Sbjct: 376 CGCIDSSYDVFFDMRNRDIITWNAMIC-------------------------------GY 404

Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCD 506
           +Q  + ++A+ LF+ MLS     + VT VGV SAC +L  ++   +    + K+  +   
Sbjct: 405 SQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPG 464

Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
           ++  T +V +  R G  + A    R  + K DV AW   + A  +  N
Sbjct: 465 LEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRN 512



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 197/381 (51%), Gaps = 16/381 (4%)

Query: 96  DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
           DN+  A  F YNS++      G   EA+ +   +   G++ D  T+  V+  C +    G
Sbjct: 187 DNDNDA--FCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLG 244

Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
            G+QVH  ++K G   DVFV + L++ +G+CGD++  R+VFD +  RNVV WTSL+ A  
Sbjct: 245 LGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYL 304

Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
           +    +E + L   M  EG   N  T   +++A A +  L  GD + A +++LG+K   +
Sbjct: 305 QNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVI 364

Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
           + NAL++MY KCG +D++  +F + ++R+++  N ++  Y + GL ++AL +  +ML  G
Sbjct: 365 VGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAG 424

Query: 336 PRPDRVTMLSAVSASAQL-----GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
             P+ VT +  +SA A L     G     ++   + +  GLE +  +    + +  + G 
Sbjct: 425 ECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCV----VAVLCRAGM 480

Query: 391 QEMACRIFDHMSNK-TVVSWNSLI--AGLIKNGDVESA-REVFSEMPGRDHISWNTMLGG 446
            E A         K  VV+W  L+    + +N ++ +   E   +M  RD  ++ T+L  
Sbjct: 481 LEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTY-TLLSN 539

Query: 447 LTQENMFEEAMELFRVMLSER 467
           +  +    +++ + R M+ ER
Sbjct: 540 MYAKARSWDSVTMIRKMMRER 560


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/681 (35%), Positives = 381/681 (55%), Gaps = 40/681 (5%)

Query: 172 DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV 231
           +VF  N LIN Y +   I   R+VFDE+ + ++VS+ +LI A A R   + A+ LF E+ 
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133

Query: 232 EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD 291
           E     +  T+  VI AC    ++ L  ++  ++   G    A + NA++  Y + G ++
Sbjct: 134 ELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191

Query: 292 TAKQLF---GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
            A+++F   GE   R+ V  N ++    +     EA+ +  EM+  G + D  TM S ++
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251

Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
           A   + DL+ G   HG ++++G  G   + + +ID+Y KC    + CR            
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECR------------ 299

Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ-ENMFEEAMELFRVMLSER 467
                             +VF E+   D + WNTM+ G +Q E++ E+ +  FR M    
Sbjct: 300 ------------------KVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNG 341

Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI-HCDMQLATALVDMFARCGDPQRA 526
              D  + V V SAC  L +  + K ++A   K+ I +  + +  ALV M+++CG+   A
Sbjct: 342 FHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDA 401

Query: 527 MQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHG 586
            +VF  M + ++ +  + I   A  G   +++ LF  ML++ I P++I F+ VL+AC H 
Sbjct: 402 RRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHT 461

Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
           G V +G   F  M +   + P+  HY CM+DLLGRAG L EA  +I++MP  P  + W +
Sbjct: 462 GKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWAT 521

Query: 647 LLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGI 706
           LL AC+KH NV++A  AA    +L+P  +  +V+LSN+YASA +W   A V+  M+E+G+
Sbjct: 522 LLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGV 581

Query: 707 RKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLL---D 763
           +K PG S IE++ KVH F + D SHP +  I   + E+  +++ AGYVPD+   L+   +
Sbjct: 582 KKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEE 641

Query: 764 VDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREII 823
           V+  EK+  L +HSEKLA+AFGLIST + +PI VVKNLR+C DCH+  KL+S +  REI 
Sbjct: 642 VEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREIT 701

Query: 824 VRDNNRFHFFRQGSCSCSDFW 844
           VRD +RFH F++G CSC D+W
Sbjct: 702 VRDTHRFHCFKEGHCSCGDYW 722



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 221/470 (47%), Gaps = 43/470 (9%)

Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
           YN+LI  Y+  G    A+ L+ E+       D FT   V+ AC      G   Q+H  +V
Sbjct: 109 YNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIAC--GDDVGLVRQLHCFVV 166

Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE---RNVVSWTSLICACARRDLPKE 222
             G+D    V N ++  Y   G + + RRVF EM E   R+ VSW ++I AC +     E
Sbjct: 167 VCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLE 226

Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
           AV LF EMV  G+K +  TM  V++A   +++L  G +    + + G   N+ + + L+D
Sbjct: 227 AVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLID 286

Query: 283 MYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNYVRL-GLAREALAILDEMLLHGPRPDR 340
           +Y KC G +   +++F E    +LVL NT++S + +   L+ + +    EM  +G  PD 
Sbjct: 287 LYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDD 346

Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE-GWDSICNTMIDMYMKCGKQEMACRIFD 399
            + +   SA + L     G+  H   +++ +     S+ N ++ MY KCG    A R+FD
Sbjct: 347 CSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFD 406

Query: 400 HMSNKTVVSWNSLIAGLIKNG-DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
            M    +VS NS+IAG  ++G +VES R                                
Sbjct: 407 TMPEHNMVSLNSMIAGYAQHGVEVESLR-------------------------------- 434

Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMF 517
           LF +ML + I  + +T + V SAC + G ++   K+     E+  I  + +  + ++D+ 
Sbjct: 435 LFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLL 494

Query: 518 ARCGDPQRAMQVFRRMEKRDVS-AWTAAIGAMAMEGNGEQAVELFNEMLR 566
            R G  + A ++   M     S  W   +GA    GN E AV+  NE L+
Sbjct: 495 GRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQ 544



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 5/198 (2%)

Query: 103 LFMYNSLIRGYSCI-GLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
           L ++N++I G+S    L  + I  + E+   G  PD  +F  V +AC+  S+   G QVH
Sbjct: 310 LVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVH 369

Query: 162 GAIVK--MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
              +K  + ++R V V N L+  Y +CG++ D RRVFD M E N+VS  S+I   A+  +
Sbjct: 370 ALAIKSDIPYNR-VSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGV 428

Query: 220 PKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE-LGMKANALMVN 278
             E++ LF  M+++ I PN++T + V+SAC     +E G +    + E   ++  A   +
Sbjct: 429 EVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYS 488

Query: 279 ALVDMYMKCGAVDTAKQL 296
            ++D+  + G +  A+++
Sbjct: 489 CMIDLLGRAGKLKEAERI 506



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 86  AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
           A++ FD   + N  S      NS+I GY+  G+ VE++ L+  +    I P+  TF  VL
Sbjct: 401 ARRVFDTMPEHNMVS-----LNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVL 455

Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVEN--CLINFYGECGDIVDGRRVFDEMS-ER 202
           +AC  +    EG Q +  ++K  F  +   E+  C+I+  G  G + +  R+ + M    
Sbjct: 456 SACVHTGKVEEG-QKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNP 514

Query: 203 NVVSWTSLICACAR 216
             + W +L+ AC +
Sbjct: 515 GSIEWATLLGACRK 528


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.136    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,742,925,714
Number of Sequences: 23463169
Number of extensions: 519609346
Number of successful extensions: 1469948
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9507
Number of HSP's successfully gapped in prelim test: 2552
Number of HSP's that attempted gapping in prelim test: 1221899
Number of HSP's gapped (non-prelim): 72841
length of query: 844
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 693
effective length of database: 8,816,256,848
effective search space: 6109665995664
effective search space used: 6109665995664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 82 (36.2 bits)