BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003148
(844 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/845 (61%), Positives = 661/845 (78%), Gaps = 15/845 (1%)
Query: 5 LNPSPLVLATPTVT--TLTNQHK-AKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLG 61
L+ SP+VLAT T T +L NQ K K TP SLKNCKT++ELK H + KQGL
Sbjct: 8 LHLSPMVLATTTTTKPSLLNQSKCTKATPS------SLKNCKTIDELKMFHRSLTKQGLD 61
Query: 62 HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
+ S I+K+V ++GT ESL++A++ F+ ++E+ T FMYNSLIRGY+ GL E
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFE----NSESYGTCFMYNSLIRGYASSGLCNE 117
Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLIN 181
AI L++ + GI PDK+TFPF L+AC KS A G G+Q+HG IVKMG+ +D+FV+N L++
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMV-EEGIKPNSV 240
FY ECG++ R+VFDEMSERNVVSWTS+IC ARRD K+AV LFF MV +E + PNSV
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
TMVCVISACAKL++LE G++V A+I G++ N LMV+ALVDMYMKC A+D AK+LF E
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
NL LCN + SNYVR GL REAL + + M+ G RPDR++MLSA+S+ +QL ++L G+
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
CHGYVLRNG E WD+ICN +IDMYMKC +Q+ A RIFD MSNKTVV+WNS++AG ++NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS-ERIKVDRVTMVGVA 479
+V++A E F MP ++ +SWNT++ GL Q ++FEEA+E+F M S E + D VTM+ +A
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
SACG+LGALDLAKWIY YIEKNGI D++L T LVDMF+RCGDP+ AM +F + RDVS
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 540 AWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM 599
AWTAAIGAMAM GN E+A+ELF++M+ QG+KPD + FVG LTACSHGGLV QG +F SM
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 600 TDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDI 659
+HGVSP+ VHYGCMVDLLGRAGLL EA+ LI+ MP+EPNDVIW SLLAAC+ NV++
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 660 AAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNG 719
AAYAAE+I L PE++G +VLLSN+YASAG+W ++A+VRL MKE+G+RK PG+SSI++ G
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Query: 720 KVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEK 779
K HEFTSGDESHPEM NI +ML E++ R G+VPDL+NVL+DVDE+EK ++LS HSEK
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEK 777
Query: 780 LAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCS 839
LAMA+GLIS++K IR+VKNLR+C DCHSFAK SKVY+REII+RDNNRFH+ RQG CS
Sbjct: 778 LAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCS 837
Query: 840 CSDFW 844
C DFW
Sbjct: 838 CGDFW 842
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/691 (39%), Positives = 430/691 (62%), Gaps = 5/691 (0%)
Query: 159 QVHGAIVKMGFDRDVFVENCLINF--YGECGDIVDGRRVFDEMSERNVVSWTSLICACAR 216
Q HG +++ G D + + L + R+VFDE+ + N +W +LI A A
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 217 RDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
P +++ F +MV E PN T +I A A++ +L LG + + + ++
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
+ N+L+ Y CG +D+A ++F K++++V N++++ +V+ G +AL + +M
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
+ VTM+ +SA A++ +L GR Y+ N + ++ N M+DMY KCG E A
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 396 RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEE 455
R+FD M K V+W +++ G + D E+AREV + MP +D ++WN ++ Q E
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 456 AMELFR-VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
A+ +F + L + +K++++T+V SAC +GAL+L +WI++YI+K+GI + + +AL+
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
M+++CGD +++ +VF +EKRDV W+A IG +AM G G +AV++F +M +KP+ +
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
F V ACSH GLV++ LF M +G+ P+ HY C+VD+LGR+G L +A+ I++
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 635 MPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNV 694
MP+ P+ +WG+LL AC+ H N+++A A R+ EL+P G HVLLSNIYA GKW NV
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 695 ARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYV 754
+ +R M+ G++K PG SSIE++G +HEF SGD +HP + L E+ +L+ GY
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647
Query: 755 PDLTNVLLDVDEQE-KKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
P+++ VL ++E+E K+ L+ HSEKLA+ +GLIST IRV+KNLR+C DCHS AKL
Sbjct: 648 PEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKL 707
Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
+S++YDREIIVRD RFH FR G CSC+DFW
Sbjct: 708 ISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 292/588 (49%), Gaps = 74/588 (12%)
Query: 1 MALTLNPSPLVLATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGL 60
MA+ PL L P +N ++ T + S I ++ C +L +LKQ H H+++ G
Sbjct: 1 MAIFSTAQPLSL--PRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGT 58
Query: 61 GHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV 120
P SK+ A + +F SL YA+K FD K N F +N+LIR Y+ V
Sbjct: 59 FSDPYSASKLFAMAA-LSSFASLEYARKVFDEIPKPNS-----FAWNTLIRAYASGPDPV 112
Query: 121 EAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCL 179
+I ++++ P+K+TFPF++ A + S+ G +HG VK DVFV N L
Sbjct: 113 LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSL 172
Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
I+ Y CGD+ +VF + E++VVSW S+I ++ P +A+ LF +M E +K +
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232
Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG- 298
VTMV V+SACAK++NLE G +VC+YI+E + N + NA++DMY KCG+++ AK+LF
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 299 -ECKD-----------------------------RNLVLCNTIMSNYVRLGLAREALAIL 328
E KD +++V N ++S Y + G EAL +
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 329 DEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
E+ L + +++T++S +SA AQ+G L GR H Y+ ++G+ + + +I MY K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
CG E + +F+ + + V W+++I GGL
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMI-------------------------------GGL 441
Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCD 506
EA+++F M +K + VT V AC + G +D A+ ++ +E N GI +
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Query: 507 MQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
+ +VD+ R G ++A++ M S W A +GA + N
Sbjct: 502 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 294/813 (36%), Positives = 459/813 (56%), Gaps = 40/813 (4%)
Query: 32 DSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFD 91
+ P+ L+ C +L EL+Q + K GL + + +K+V + G+ + + D
Sbjct: 37 EHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96
Query: 92 YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKS 151
S +Y+++++G++ + +A+ +V + + P + F ++L C
Sbjct: 97 --------SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 148
Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
+ G ++HG +VK GF D+F L N Y +C + + R+VFD M ER++VSW +++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 212 CACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
++ + + A+ + M EE +KP+ +T+V V+ A + L+ + +G + Y G
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
+ + ALVDMY KCG+++TA+QLF +RN+V N+++ YV+ +EA+ I +M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
L G +P V+++ A+ A A LGDL GR H + GL+ S+ N++I MY KC
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK-- 386
Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
+V++A +F ++ R +SWN M+ G Q
Sbjct: 387 -----------------------------EVDTAASMFGKLQSRTLVSWNAMILGFAQNG 417
Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
+A+ F M S +K D T V V +A L AKWI+ + ++ + ++ + T
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477
Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
ALVDM+A+CG A +F M +R V+ W A I G G+ A+ELF EM + IKP
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
+ + F+ V++ACSH GLV G F M + + + + HYG MVDLLGRAG L EA D
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 597
Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
I MPV+P ++G++L ACQ H+NV+ A AAER+ EL+P+ G HVLL+NIY +A W
Sbjct: 598 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 657
Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
V +VR+ M QG+RK PG S +E+ +VH F SG +HP+ I + L ++ C +++A
Sbjct: 658 EKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA 717
Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
GYVPD TN++L V+ K+ LLS HSEKLA++FGL++T+ I V KNLR+C DCH+
Sbjct: 718 GYVPD-TNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNAT 776
Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
K +S V REI+VRD RFH F+ G+CSC D+W
Sbjct: 777 KYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/813 (37%), Positives = 454/813 (55%), Gaps = 56/813 (6%)
Query: 38 SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDN 97
SLK+ K ++ + + ++ LG K +S + C L A + FD +
Sbjct: 109 SLKDGKEVDNFIRGNGFVIDSNLGSK---LSLMYTNCGD------LKEASRVFD----EV 155
Query: 98 ETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEG 157
+ LF +N L+ + G +I L+ ++ G+ D +TF V + + + G
Sbjct: 156 KIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
Q+HG I+K GF V N L+ FY + + R+VFDEM+ER+V+SW S+I
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA----N 273
L ++ + +F +M+ GI+ + T+V V + CA + + LG V +G+KA
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV----HSIGVKACFSRE 330
Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
N L+DMY KCG +D+AK +F E DR++V ++++ Y R GLA EA+ + +EM
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQE 392
G PD T+ + ++ A+ L G+ H ++ N L G+D + N ++DMY KCG
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL-GFDIFVSNALMDMYAKCGS-- 447
Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
++ A VFSEM +D ISWNT++GG ++
Sbjct: 448 -----------------------------MQEAELVFSEMRVKDIISWNTIIGGYSKNCY 478
Query: 453 FEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
EA+ LF ++L E R D T+ V AC L A D + I+ YI +NG D +A
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 538
Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
+LVDM+A+CG A +F + +D+ +WT I M G G++A+ LFN+M + GI+
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 598
Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
D I FV +L ACSH GLV++GW F M + P + HY C+VD+L R G L +A
Sbjct: 599 DEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRF 658
Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
I++MP+ P+ IWG+LL C+ H +V +A AE++ EL+PE +G +VL++NIYA A KW
Sbjct: 659 IENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKW 718
Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
V R+R ++ ++G+RK PG S IE+ G+V+ F +GD S+PE NI + LR++ R+ +
Sbjct: 719 EQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEE 778
Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
GY P L+D +E EK+ L HSEKLAMA G+IS+ IRV KNLR+C DCH A
Sbjct: 779 GYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMA 838
Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
K +SK+ REI++RD+NRFH F+ G CSC FW
Sbjct: 839 KFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/556 (28%), Positives = 261/556 (46%), Gaps = 65/556 (11%)
Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
D T VL C S + +G +V I GF D + + L Y CGD+ + RVF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
DE+ + W L+ A+ ++ LF +M+ G++ +S T CV + + L+++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV 316
G+++ +I + G + N+LV Y+K VD+A+++F E +R+++ N+I++ YV
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
GLA + L++ +ML+ G D T++S + A + GR H ++ D
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 377 ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD 436
CNT++DMY KCG + A +F MS+++VVS+ S+IAG + G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG---------------- 376
Query: 437 HISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA 496
L G EA++LF M E I D T+ V + C LD K ++
Sbjct: 377 -------LAG--------EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 497 YIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQ 556
+I++N + D+ ++ AL+DM+A+CG Q A VF M +D+ +W IG + +
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 557 AVELFNEMLRQG-IKPDSIVFVGVLTACS-----------HGGLVNQGW----HLFRSMT 600
A+ LFN +L + PD VL AC+ HG ++ G+ H+ S+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 601 DIHG---------------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP---VEPNDV 642
D++ S +V + M+ G G EA+ L M +E +++
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601
Query: 643 IWGSLLAACQKHQNVD 658
+ SLL AC VD
Sbjct: 602 SFVSLLYACSHSGLVD 617
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 94/233 (40%), Gaps = 39/233 (16%)
Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
NT L + E A++L V S + +D T+ V C +L K + +I
Sbjct: 65 NTQLRRFCESGNLENAVKLLCV--SGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
NG D L + L M+ CGD + A +VF ++ W + +A G+ ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
F +M+ G++ DS F V + F S+ +HG
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKS-------------FSSLRSVHG---------------- 213
Query: 621 RAGLLGEALD--LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELD 671
GE L ++KS E N V SL+A K+Q VD A + +TE D
Sbjct: 214 -----GEQLHGFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERD 260
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/865 (34%), Positives = 456/865 (52%), Gaps = 84/865 (9%)
Query: 26 AKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
+ + P+ +P + CKT++++K H +L G I + T + T+ S+
Sbjct: 24 STSAPEITPPF--IHKCKTISQVKLIHQKLLSFG-------ILTLNLTSHLISTYISVGC 74
Query: 86 AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
A + + A ++ +NSLIR Y G + + L+ + PD +TFPFV
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVF 134
Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
AC + S+ G H + GF +VFV N L+ Y C + D R+VFDEMS +VV
Sbjct: 135 KACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV 194
Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAY 264
SW S+I + A+ PK A+ +F M E G +P+++T+V V+ CA L LG ++ +
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 265 IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY--------- 315
M N + N LVDMY KCG +D A +F +++V N +++ Y
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 316 VRL--------------------------GLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
VRL GL EAL + +ML G +P+ VT++S +S
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 350 SAQLGDLLCGRMCHGYVLR-------NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
A +G L+ G+ H Y ++ NG + + N +IDMY KC K + A +FD +S
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
K RD ++W M+GG +Q +A+EL
Sbjct: 435 PKE-----------------------------RDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 463 MLSE--RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFAR 519
M E + + + T+ AC L AL + K I+AY +N + + ++ L+DM+A+
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525
Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
CG A VF M ++ WT+ + M G GE+A+ +F+EM R G K D + + V
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585
Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
L ACSH G+++QG F M + GVSP HY C+VDLLGRAG L AL LI+ MP+EP
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 645
Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
V+W + L+ C+ H V++ YAAE+ITEL G + LLSN+YA+AG+W +V R+R
Sbjct: 646 PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRS 705
Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
M+ +G++K PG S +E F GD++HP I +L + R++D GYVP+
Sbjct: 706 LMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGF 765
Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
L DVD++EK LL HSEKLA+A+G+++T + IR+ KNLR+C DCH+ +S++ D
Sbjct: 766 ALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIID 825
Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
+II+RD++RFH F+ GSCSC +W
Sbjct: 826 HDIILRDSSRFHHFKNGSCSCKGYW 850
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 516 bits (1330), Expect = e-145, Method: Compositional matrix adjust.
Identities = 284/753 (37%), Positives = 430/753 (57%), Gaps = 43/753 (5%)
Query: 96 DNETSATLFMYNSLIRGYSCIGLGVEAISLY-VELAGFGILPDKFTFPFVLNACTKSSAF 154
D+ + ++ +N +I GY G E I + + + G+ PD TFP VL AC
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 166
Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
+G ++H +K GF DV+V LI+ Y + + R +FDEM R++ SW ++I
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 215 ARRDLPKEAVYLFFEMVEEGIKP-NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
+ KEA+ L G++ +SVT+V ++SAC + + G + +Y + G+++
Sbjct: 227 CQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
+ N L+D+Y + G + +++F R+L+ N+I+ Y A+++ EM L
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL 341
Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD-SICNTMIDMYMKCGKQE 392
+PD +T++S S +QLGD+ R G+ LR G D +I N ++ MY K G
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL-- 399
Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
V+SAR VF+ +P D ISWNT++ G Q
Sbjct: 400 -----------------------------VDSARAVFNWLPNTDVISWNTIISGYAQNGF 430
Query: 453 FEEAMELFRVMLSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
EA+E++ +M E I ++ T V V AC GAL ++ + KNG++ D+ + T
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
+L DM+ +CG + A+ +F ++ + + W I G+GE+AV LF EML +G+KP
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
D I FV +L+ACSH GLV++G F M +G++P + HYGCMVD+ GRAG L AL
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
IKSM ++P+ IWG+LL+AC+ H NVD+ A+E + E++PE G HVLLSN+YASAGKW
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670
Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
V +R +G+RK PG SS+EV+ KV F +G+++HP + L + +L+
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFA 811
GYVPD VL DV++ EK+++L HSE+LA+AF LI+T IR+ KNLR+C DCHS
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVT 790
Query: 812 KLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
K +SK+ +REIIVRD+NRFH F+ G CSC D+W
Sbjct: 791 KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 258/529 (48%), Gaps = 59/529 (11%)
Query: 34 PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
PS+ LK C+T+ + + HC LK G + ++ ++ ++++ A+ FD
Sbjct: 157 PSV--LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR---YKAVGNARILFDEM 211
Query: 94 -IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
++D + +N++I GY G EA++L L D T +L+ACT++
Sbjct: 212 PVRDMGS------WNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG 261
Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
F GV +H +K G + ++FV N LI+ Y E G + D ++VFD M R+++SW S+I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 213 ACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKA 272
A + P A+ LF EM I+P+ +T++ + S ++L ++ R C + ++
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI----RACRSVQGFTLRK 377
Query: 273 NALMV-----NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
+ NA+V MY K G VD+A+ +F + +++ NTI+S Y + G A EA+ +
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 437
Query: 328 LDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
+ M G ++ T +S + A +Q G L G HG +L+NGL + ++ DMY
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 497
Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
KCG+ E A +F + V WN+LIA +G E A +F EM
Sbjct: 498 KCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM-------------- 543
Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHC 505
L E +K D +T V + SAC + G +D +W + ++ + GI
Sbjct: 544 -----------------LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
++ +VDM+ R G + A++ + M + D S W A + A + GN
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 228/494 (46%), Gaps = 45/494 (9%)
Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDL 219
+H +V ++V + L+N Y G++ R FD + R+V +W +I R
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 220 PKEAVYLF-FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
E + F M+ G+ P+ T V+ AC + + G+++ + G + +
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189
Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
+L+ +Y + AV A+ LF E R++ N ++S Y + G A+EAL L +G R
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRA 244
Query: 339 -DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
D VT++S +SA + GD G H Y +++GLE + N +ID+Y + G+ ++
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
FD M + ++SWNS+I N E P R A+
Sbjct: 305 FDRMYVRDLISWNSIIKAYELN-----------EQPLR--------------------AI 333
Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDM 516
LF+ M RI+ D +T++ +AS LG + + + + + G D+ + A+V M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIV 575
+A+ G A VF + DV +W I A G +A+E++N M +G I +
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 576 FVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSM 635
+V VL ACS G + QG L + +G+ + + D+ G+ G L +AL L +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 636 PVEPNDVIWGSLLA 649
P N V W +L+A
Sbjct: 513 P-RVNSVPWNTLIA 525
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 184/435 (42%), Gaps = 75/435 (17%)
Query: 273 NALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD-EM 331
N + LV++Y G V A+ F ++R++ N ++S Y R G + E + M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
L G PD T S + A + D G H L+ G M D+Y+
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGF---------MWDVYVAA--- 189
Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
SLI + V +AR +F EMP RD SWN M+ G Q
Sbjct: 190 -------------------SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
+EA+ L + + +D VT+V + SAC G + I++Y K+G+ ++ ++
Sbjct: 231 NAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
L+D++A G + +VF RM RD+ +W + I A + +A+ LF EM I+P
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 572 DSIVFV---------GVLTACS--HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
D + + G + AC G + +GW L DI + +V Y
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL----EDITIGNAVVVMY-------A 395
Query: 621 RAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
+ GL+ A + +P DVI W ++++ ++ A+ A E ++ E
Sbjct: 396 KLGLVDSARAVFNWLP--NTDVISWNTIISGYAQN---GFASEAIEMYNIMEEE------ 444
Query: 680 LLSNIYASAGKWTNV 694
I A+ G W +V
Sbjct: 445 --GEIAANQGTWVSV 457
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/723 (37%), Positives = 418/723 (57%), Gaps = 71/723 (9%)
Query: 160 VHGAIVKMGFDRDVF-----VENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
+H ++K+G + +E C+++ + E + VF + E N++ W ++
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
A P A+ L+ M+ G+ PNS T V+ +CAK + + G ++ ++ +LG +
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 275 LMVNALVDMYMKCGA-------------------------------VDTAKQLFGECKDR 303
+ +L+ MY++ G ++ A++LF E +
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
++V N ++S Y G +EAL + +M+ RPD TM++ VSA AQ G + GR H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
++ +G I N +ID+Y KCG ++E
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCG-------------------------------ELE 318
Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
+A +F +P +D ISWNT++GG T N+++EA+ LF+ ML + VTM+ + AC
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 484 YLGALDLAKWIYAYIEK--NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
+LGA+D+ +WI+ YI+K G+ L T+L+DM+A+CGD + A QVF + + +S+W
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
A I AM G + + +LF+ M + GI+PD I FVG+L+ACSH G+++ G H+FR+MT
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
+ ++P++ HYGCM+DLLG +GL EA ++I M +EP+ VIW SLL AC+ H NV++
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
AE + +++PE G +VLLSNIYASAG+W VA+ R + ++G++K+PG SSIE++ V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
HEF GD+ HP I ML EM L AG+VPD + VL +++E+ K+ L HHSEKLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
+AFGLIST + +VKNLR+C +CH KL+SK+Y REII RD RFH FR G CSC+
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 842 DFW 844
D+W
Sbjct: 739 DYW 741
Score = 292 bits (748), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 303/578 (52%), Gaps = 73/578 (12%)
Query: 31 KDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAF 90
++ PS+ L NCKTL L+ H ++K GL + +SK++ C FE L YA F
Sbjct: 32 RNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVF 91
Query: 91 DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
+ N L ++N++ RG++ V A+ LYV + G+LP+ +TFPFVL +C K
Sbjct: 92 KTIQEPN-----LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
S AF EG Q+HG ++K+G D D++V LI+ Y + G + D +VFD+ R+VVS+T+L
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 211 ICACARR-----------DLP--------------------KEAVYLFFEMVEEGIKPNS 239
I A R ++P KEA+ LF +M++ ++P+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
TMV V+SACA+ ++ELG +V +ID+ G +N +VNAL+D+Y KCG ++TA LF
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
++++ NT++ Y + L +EAL + EML G P+ VTMLS + A A LG + G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 360 RMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
R H Y+ + G+ S+ ++IDMY KCG E A ++F+ + +K++ SWN++I G
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
+G +++ ++FS M +G I+ D +T VG
Sbjct: 447 MHGRADASFDLFSRM---------RKIG----------------------IQPDDITFVG 475
Query: 478 VASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCG-DPQRAMQVFRRMEK 535
+ SAC + G LDL + I+ + ++ + ++ ++D+ G + + +
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME 535
Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
D W + + A M GN E E F E L + I+P++
Sbjct: 536 PDGVIWCSLLKACKMHGNVELG-ESFAENLIK-IEPEN 571
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 509 bits (1312), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/831 (32%), Positives = 451/831 (54%), Gaps = 45/831 (5%)
Query: 16 TVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCA 75
TV++ T + A K++ + K +++ L Q H I+ G + S ++K+ +
Sbjct: 5 TVSSATAETTAALISKNT-YLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLS 63
Query: 76 QMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGI 134
+G ++ YA+ F + + +F++N L+RG+S ++S++ L +
Sbjct: 64 DLG---AIYYARDIFLSVQRPD-----VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDL 115
Query: 135 LPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRR 194
P+ T+ F ++A + G +HG V G D ++ + + ++ Y + + D R+
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175
Query: 195 VFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQ 253
VFD M E++ + W ++I + ++ E++ +F +++ E + ++ T++ ++ A A+LQ
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
L LG ++ + + G ++ ++ + +Y KCG + LF E + ++V N ++
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
Y G +L++ E++L G R T++S V S G L+ HGY L++
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLS 352
Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
S+ + +Y K ++ESAR++F E P
Sbjct: 353 HASVSTALTTVYSKLN-------------------------------EIESARKLFDESP 381
Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
+ SWN M+ G TQ + E+A+ LFR M + VT+ + SAC LGAL L KW
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
++ + + ++TAL+ M+A+CG A ++F M K++ W I + G
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
G++A+ +F EML GI P + F+ VL ACSH GLV +G +F SM +G P + HY
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
CMVD+LGRAG L AL I++M +EP +W +LL AC+ H++ ++A +E++ ELDP+
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
G HVLLSNI+++ + A VR K++ + K PG + IE+ H FTSGD+SHP+
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
+ I L ++ ++R+AGY P+ L DV+E+E++ ++ HSE+LA+AFGLI+T
Sbjct: 682 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 741
Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
IR++KNLR+C DCH+ KL+SK+ +R I+VRD NRFH F+ G CSC D+W
Sbjct: 742 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/783 (35%), Positives = 431/783 (55%), Gaps = 74/783 (9%)
Query: 136 PDKFTFPFVLNACT--------KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
P + +L CT KS+ VH ++K G V++ N L+N Y + G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARR-----------DLPK--------------- 221
+ R++FDEM R SW +++ A ++R LP+
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 222 -----EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
+A+ + +MV+EGI+P T+ V+++ A + +E G +V ++I +LG++ N +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 277 VNALVDMYMKCG-------------------------------AVDTAKQLFGECKDRNL 305
N+L++MY KCG +D A F + +R++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLCGRMCHG 364
V N+++S + + G AL I +ML PDR T+ S +SA A L L G+ H
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK--TVVSWNSLIAGLIKNGDV 422
+++ G + + N +I MY +CG E A R+ + K + + +L+ G IK GD+
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
A+ +F + RD ++W M+ G Q + EA+ LFR M+ + + T+ + S
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAW 541
L +L K I+ K+G + ++ AL+ M+A+ G+ A + F + +RD +W
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSW 483
Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
T+ I A+A G+ E+A+ELF ML +G++PD I +VGV +AC+H GLVNQG F M D
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Query: 602 IHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAA 661
+ + P + HY CMVDL GRAGLL EA + I+ MP+EP+ V WGSLL+AC+ H+N+D+
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK 603
Query: 662 YAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKV 721
AAER+ L+PE SG + L+N+Y++ GKW A++R MK+ ++K G S IEV KV
Sbjct: 604 VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKV 663
Query: 722 HEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLA 781
H F D +HPE N I ++++ ++ GYVPD +VL D++E+ K+ +L HHSEKLA
Sbjct: 664 HVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLA 723
Query: 782 MAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCS 841
+AFGLIST +R++KNLR+C DCH+ K +SK+ REIIVRD RFH F+ G CSC
Sbjct: 724 IAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCR 783
Query: 842 DFW 844
D+W
Sbjct: 784 DYW 786
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/751 (35%), Positives = 423/751 (56%), Gaps = 46/751 (6%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
+++++ Y G ++AI ++VE G++P+ + + V+ AC+ S G G G ++
Sbjct: 134 WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193
Query: 166 KMG-FDRDVFVENCLINFY--GECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
K G F+ DV V LI+ + GE + +VFD+MSE NVV+WT +I C + P+E
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGE-NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
A+ F +MV G + + T+ V SACA+L+NL LG ++ ++ G+ + +LVD
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVD 310
Query: 283 MYMKC---GAVDTAKQLFGECKDRNLVLCNTIMSNYVR-LGLAREALAILDEMLLHGP-R 337
MY KC G+VD +++F +D +++ +++ Y++ LA EA+ + EM+ G
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370
Query: 338 PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRI 397
P+ T SA A L D G+ G + GL S+ N++I M++K +
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR------- 423
Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
+E A+ F + ++ +S+NT L G + FE+A
Sbjct: 424 ------------------------MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMF 517
+L + + V T + S +G++ + I++ + K G+ C+ + AL+ M+
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 518 ARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFV 577
++CG A +VF ME R+V +WT+ I A G + +E FN+M+ +G+KP+ + +V
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579
Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
+L+ACSH GLV++GW F SM + H + P++ HY CMVDLL RAGLL +A + I +MP
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639
Query: 638 EPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARV 697
+ + ++W + L AC+ H N ++ AA +I ELDP + ++ LSNIYA AGKW +
Sbjct: 640 QADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEM 699
Query: 698 RLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDL 757
R +MKE+ + K G S IEV K+H+F GD +HP + I L + ++ GYVPD
Sbjct: 700 RRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDT 759
Query: 758 TNVLLDVDEQEKKY----LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
VL ++E+ + LL HSEK+A+AFGLISTSK+ P+RV KNLR+C DCH+ K
Sbjct: 760 DLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKY 819
Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
+S V REI++RD NRFH F+ G CSC+D+W
Sbjct: 820 ISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 192 bits (489), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 228/509 (44%), Gaps = 50/509 (9%)
Query: 59 GLGHKPSYISKVVCT-CAQMGTF----ESLTYAQKAFDYYIKDNETSATLFMYNSLIRGY 113
G K + VC C+ + F S A K FD + N + TL + + G+
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 114 SCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDV 173
EAI ++++ G DKFT V +AC + G Q+H ++ G D
Sbjct: 250 P-----REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD- 303
Query: 174 FVENCLINFYGEC---GDIVDGRRVFDEMSERNVVSWTSLICACARR-DLPKEAVYLFFE 229
VE L++ Y +C G + D R+VFD M + +V+SWT+LI + +L EA+ LF E
Sbjct: 304 -VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 230 MVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
M+ +G ++PN T AC L + +G +V + G+ +N+ + N+++ M++K
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
++ A++ F ++NLV NT + R +A +L E+ T S +S
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 349 ASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS 408
A +G + G H V++ GL +CN +I MY KCG + A R+F+ M N+ V+S
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542
Query: 409 WNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERI 468
W S+I G K+G +E F M+ E +
Sbjct: 543 WTSMITGFAKHG-------------------------------FAIRVLETFNQMIEEGV 571
Query: 469 KVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
K + VT V + SAC ++G + + + E + I M+ +VD+ R G A
Sbjct: 572 KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAF 631
Query: 528 QVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
+ M + DV W +GA + N E
Sbjct: 632 EFINTMPFQADVLVWRTFLGACRVHSNTE 660
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 254/543 (46%), Gaps = 44/543 (8%)
Query: 122 AISLYVELAGFGILP-DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
A+S +A GI P D TF +L +C ++ F G VH +++ + D + N LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 181 NFYGECGDIVDGRRVFDEM---SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP 237
+ Y + GD VF+ M +R+VVSW++++ +A+ +F E +E G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN-ALVDMYMKC-GAVDTAKQ 295
N VI AC+ + +G ++ + G + + V +L+DM++K + + A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
+F + + N+V +++ +++G REA+ +M+L G D+ T+ S SA A+L +
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC---GKQEMACRIFDHMSNKTVVSWNSL 412
L G+ H + +R+GL D + +++DMY KC G + ++FD M + +V+SW +L
Sbjct: 285 LSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVD 471
I G +KN N+ EA+ LF M+++ ++ +
Sbjct: 343 ITGYMKNC------------------------------NLATEAINLFSEMITQGHVEPN 372
Query: 472 RVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFR 531
T ACG L + K + K G+ + +A +++ MF + + A + F
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
+ ++++ ++ + N EQA +L +E+ + + + F +L+ ++ G + +
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 592 GWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAAC 651
G + + + G+S ++ + + G + A + M N + W S++
Sbjct: 493 GEQIHSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGF 550
Query: 652 QKH 654
KH
Sbjct: 551 AKH 553
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 177/437 (40%), Gaps = 57/437 (13%)
Query: 307 LCNTIMSNYVRLGLAREALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRMCHGY 365
+ + ++ ++ G R A++ LD M G RP D VT S + + + D G++ H
Sbjct: 28 VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87
Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
++ +E DS+ +NSLI+ K+GD A
Sbjct: 88 LIEFDIEP-DSVL------------------------------YNSLISLYSKSGDSAKA 116
Query: 426 REVFSEMP---GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
+VF M RD +SW+ M+ +A+++F L + + V AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 483 GYLGALDLAKWIYAYIEKNG-IHCDMQLATALVDMFARCGDP-QRAMQVFRRMEKRDVSA 540
+ + + ++ K G D+ + +L+DMF + + + A +VF +M + +V
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 541 WTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG-----WHL 595
WT I G +A+ F +M+ G + D V +AC+ ++ G W +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 596 FRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP-VEPNDVI-WGSLLAACQK 653
+ D S +VD+ + G D K +E + V+ W +L+ K
Sbjct: 297 RSGLVDDVECS--------LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 654 HQNVDIAAYA--AERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPG 711
+ N+ A +E IT+ E + H S+ + + G ++ RV Q+ Q ++
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPN--HFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLA 405
Query: 712 SSSIEVNGKVHEFTSGD 728
S+S N + F D
Sbjct: 406 SNSSVANSVISMFVKSD 422
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/819 (33%), Positives = 429/819 (52%), Gaps = 44/819 (5%)
Query: 29 TPKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY 85
TP S+ L CK + L+ Q H +LK G + +V +G +L
Sbjct: 287 TPYAFSSV--LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG---NLIS 341
Query: 86 AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
A+ F N + YN+LI G S G G +A+ L+ + G+ PD T ++
Sbjct: 342 AEHIFS-----NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
AC+ G Q+H K+GF + +E L+N Y +C DI F E NVV
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
W ++ A D + + +F +M E I PN T ++ C +L +LELG+++ + I
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
+ + NA + + L+DMY K G +DTA + +++V T+++ Y + +AL
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 326 AILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
+ML G R D V + +AVSA A L L G+ H +G N ++ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
+CGK +E + F + D+I+WN ++
Sbjct: 637 SRCGK-------------------------------IEESYLAFEQTEAGDNIAWNALVS 665
Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
G Q EEA+ +F M E I + T A + K ++A I K G
Sbjct: 666 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725
Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
+ ++ AL+ M+A+CG A + F + ++ +W A I A + G G +A++ F++M+
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
++P+ + VGVL+ACSH GLV++G F SM +G+SP+ HY C+VD+L RAGLL
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIY 685
A + I+ MP++P+ ++W +LL+AC H+N++I +AA + EL+PE S +VLLSN+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 686 ASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMN 745
A + KW R +MKE+G++K PG S IEV +H F GD++HP + I +++
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 965
Query: 746 CRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
R + GYV D ++L ++ ++K ++ HSEKLA++FGL+S T+PI V+KNLR+C
Sbjct: 966 KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 1025
Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
DCH++ K VSKV +REIIVRD RFH F G+CSC D+W
Sbjct: 1026 DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 263 bits (671), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 173/631 (27%), Positives = 300/631 (47%), Gaps = 47/631 (7%)
Query: 29 TPKDSPSIGSLKNCK----TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLT 84
TP + G L+ C+ + ++Q H IL QGL + ++ ++ G +
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVD--- 239
Query: 85 YAQKAFD-YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
A++ FD +KD+ + + ++I G S EAI L+ ++ GI+P + F
Sbjct: 240 LARRVFDGLRLKDHSS------WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293
Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
VL+AC K + G Q+HG ++K+GF D +V N L++ Y G+++ +F MS+R+
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
V++ +LI ++ ++A+ LF M +G++P+S T+ ++ AC+ L G ++ A
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
Y +LG +N + AL+++Y KC ++TA F E + N+VL N ++ Y L R
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
+ I +M + P++ T S + +LGDL G H +++ + +C+ +ID
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTM 443
MY K GK + A I + K VVSW ++IA
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIA----------------------------- 564
Query: 444 LGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGI 503
G TQ N ++A+ FR ML I+ D V + SAC L AL + I+A +G
Sbjct: 565 --GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 504 HCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
D+ ALV +++RCG + + F + E D AW A + GN E+A+ +F
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
M R+GI ++ F + A S + QG + +T G + ++ + + G
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCG 741
Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
+ +A + + N+V W +++ A KH
Sbjct: 742 SISDAEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 248/533 (46%), Gaps = 41/533 (7%)
Query: 133 GILPDKFTFPFVLNACTKSS-AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
GI P+ T ++L C K++ + EG ++H I+K+G D + + L +FY GD+
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC-A 250
+VFDEM ER + +W +I A R+L E LF MV E + PN T V+ AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
++ +++ A I G++ + ++ N L+D+Y + G VD A+++F + ++
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
++S + EA+ + +M + G P S +SA ++ L G HG VL+ G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
+CN ++ +Y G A IF +MS + V++N+LI GL
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL-------------- 364
Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
+Q E+AMELF+ M + ++ D T+ + AC G L
Sbjct: 365 -----------------SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
+ ++AY K G + ++ AL++++A+C D + A+ F E +V W + A +
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
+ + +F +M + I P+ + +L C G + G + + I + Q+
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLN 524
Query: 611 HYGC--MVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
Y C ++D+ + G L A D++ + DV+ W +++A ++ D A
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC-G 483
R VF + G S+ + ++++ F+E + + + I+ + T+ + C
Sbjct: 39 TRTVFPTLCGTRRASFAAISVYISEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLK 96
Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
G+LD + +++ I K G+ + L+ L D + GD A +VF M +R + W
Sbjct: 97 TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156
Query: 544 AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIH 603
I +A + LF M+ + + P+ F GVL AC G + +
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 604 GVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQ 655
G+ V ++DL R G + A + + ++ + W ++++ K++
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS-WVAMISGLSKNE 267
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/714 (35%), Positives = 409/714 (57%), Gaps = 38/714 (5%)
Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
GI D F + +A K+ + Q+H ++ +G F+ LI+ GDI
Sbjct: 17 GIHSDSFYASLIDSATHKA----QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
R+VFD++ + W ++I +R + ++A+ ++ M + P+S T ++ AC+ L
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNT 310
+L++G V A + LG A+ + N L+ +Y KC + +A+ +F +R +V
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
I+S Y + G EAL I +M +PD V ++S ++A L DL GR H V++ G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 371 LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFS 430
LE + ++ MY KCG+ V +A+ +F
Sbjct: 253 LEIEPDLLISLNTMYAKCGQ-------------------------------VATAKILFD 281
Query: 431 EMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDL 490
+M + I WN M+ G + EA+++F M+++ ++ D +++ SAC +G+L+
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 491 AKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAM 550
A+ +Y Y+ ++ D+ +++AL+DMFA+CG + A VF R RDV W+A I +
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 551 EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIV 610
G +A+ L+ M R G+ P+ + F+G+L AC+H G+V +GW F M D H ++PQ
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQ 460
Query: 611 HYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITEL 670
HY C++DLLGRAG L +A ++IK MPV+P +WG+LL+AC+KH++V++ YAA+++ +
Sbjct: 461 HYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI 520
Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
DP +G +V LSN+YA+A W VA VR++MKE+G+ K G S +EV G++ F GD+S
Sbjct: 521 DPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKS 580
Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
HP I + + RL++ G+V + L D++++E + L HSE++A+A+GLIST
Sbjct: 581 HPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTP 640
Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
+ P+R+ KNLR C +CH+ KL+SK+ DREI+VRD NRFH F+ G CSC D+W
Sbjct: 641 QGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 271/539 (50%), Gaps = 48/539 (8%)
Query: 12 LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
LA+P + T + H DS + + +LKQ H +L GL I+K++
Sbjct: 7 LASPLLYTNSGIHS------DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI 60
Query: 72 CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
+ G +T+A++ FD + +F +N++IRGYS +A+ +Y +
Sbjct: 61 HASSSFG---DITFARQVFD-----DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
+ PD FTFP +L AC+ S G VH + ++GFD DVFV+N LI Y +C +
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 192 GRRVFD--EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISAC 249
R VF+ + ER +VSWT+++ A A+ P EA+ +F +M + +KP+ V +V V++A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 250 AKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
LQ+L+ G + A + ++G++ ++ +L MY KCG V TAK LF + K NL+L N
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 310 TIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN 369
++S Y + G AREA+ + EM+ RPD +++ SA+SA AQ+G L R + YV R+
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 370 GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
I + +IDM+ KCG E A +FD ++ VV W+++I G +G
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRA------- 405
Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
EA+ L+R M + + VT +G+ AC + G +
Sbjct: 406 ------------------------REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
W + + + I+ Q ++D+ R G +A +V + M + V+ W A + A
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 8/184 (4%)
Query: 474 TMVGVASACGYLGALDLA------KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
T G+ S Y +D A K I+A + G+ L T L+ + GD A
Sbjct: 14 TNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFAR 73
Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
QVF + + + W A I + + + A+ +++ M + PDS F +L ACS
Sbjct: 74 QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGS 646
+ G + + + G + ++ L + LG A + + +P+ ++ W +
Sbjct: 134 HLQMGRFVHAQVFRL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 647 LLAA 650
+++A
Sbjct: 193 IVSA 196
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/639 (38%), Positives = 384/639 (60%), Gaps = 11/639 (1%)
Query: 217 RDLPK----EAVYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK 271
RDL + A LF++ + G + + + + ++ A +K+ L G + ++
Sbjct: 84 RDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATL 143
Query: 272 ANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM 331
+ + +DMY CG ++ A+ +F E R++V NT++ Y R GL EA + +EM
Sbjct: 144 CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203
Query: 332 LLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQ 391
PD + + + VSA + G++ R + +++ N + + ++ MY G
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263
Query: 392 EMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
+MA F MS + + ++++G K G ++ A+ +F + +D + W TM+ + +
Sbjct: 264 DMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESD 323
Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLAT 511
+EA+ +F M IK D V+M V SAC LG LD AKW+++ I NG+ ++ +
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINN 383
Query: 512 ALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKP 571
AL++M+A+CG VF +M +R+V +W++ I A++M G A+ LF M ++ ++P
Sbjct: 384 ALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP 443
Query: 572 DSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDL 631
+ + FVGVL CSH GLV +G +F SMTD + ++P++ HYGCMVDL GRA LL EAL++
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEV 503
Query: 632 IKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKW 691
I+SMPV N VIWGSL++AC+ H +++ +AA+RI EL+P+ G VL+SNIYA +W
Sbjct: 504 IESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRW 563
Query: 692 TNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDA 751
+V +R M+E+ + K G S I+ NGK HEF GD+ H + N I + L E+ +L+ A
Sbjct: 564 EDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLA 623
Query: 752 GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMP------IRVVKNLRLCC 805
GYVPD +VL+DV+E+EKK L+ HSEKLA+ FGL++ K IR+VKNLR+C
Sbjct: 624 GYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCE 683
Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
DCH F KLVSKVY+REIIVRD RFH ++ G CSC D+W
Sbjct: 684 DCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 157/550 (28%), Positives = 254/550 (46%), Gaps = 71/550 (12%)
Query: 39 LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
L CK+LN +KQ H HIL+ + HK ++ + + + +L+YA F E
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHK---LNSFLFNLSVSSSSINLSYALNVFSSIPSPPE 75
Query: 99 TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
+ ++N +R S I Y + G D+F+F +L A +K SA EG+
Sbjct: 76 S----IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGM 131
Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
++HG K+ D FVE ++ Y CG I R VFDEMS R+VV+W ++I R
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
L EA LF EM + + P+ + + ++SAC + N+ + ++ E ++ + ++
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 279 ALVDMYM-------------------------------KCGAVDTAKQLFGECKDRNLVL 307
ALV MY KCG +D A+ +F + + ++LV
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
T++S YV +EAL + +EM G +PD V+M S +SA A LG L + H +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
NGLE SI N +I+MY KCG + +F+ M + VVSW+S+I L +G+
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEA----- 426
Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
+A+ LF M E ++ + VT VGV C + G
Sbjct: 427 --------------------------SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGL 460
Query: 488 LDLAKWIYAYI-EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
++ K I+A + ++ I ++ +VD+F R + A++V M +V W + +
Sbjct: 461 VEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLM 520
Query: 546 GAMAMEGNGE 555
A + G E
Sbjct: 521 SACRIHGELE 530
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 195/424 (45%), Gaps = 55/424 (12%)
Query: 83 LTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFP 142
+ YA+ FD + + +N++I Y GL EA L+ E+ ++PD+
Sbjct: 162 INYARNVFD-----EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 143 FVLNACTKSSAFGEGVQVHGAIV--------------------------------KMGFD 170
+++AC ++ ++ ++ KM
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV- 275
Query: 171 RDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
R++FV +++ Y +CG + D + +FD+ ++++V WT++I A D P+EA+ +F EM
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
GIKP+ V+M VISACA L L+ V + I G+++ + NAL++MY KCG +
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV--- 347
D + +F + RN+V +++++ G A +AL++ M P+ VT + +
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 348 --SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NK 404
S + G + M Y + LE + M+D++ + A + + M
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHY----GCMVDLFGRANLLREALEVIESMPVAS 511
Query: 405 TVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTMLGGL-TQENMFEEAMEL 459
VV W SL++ +G++E +A+ + P DH ++ + +E +E+ +
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELEP--DHDGALVLMSNIYAREQRWEDVRNI 569
Query: 460 FRVM 463
RVM
Sbjct: 570 RRVM 573
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/685 (36%), Positives = 387/685 (56%), Gaps = 67/685 (9%)
Query: 196 FDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
F + V++W S+I + L +A+ F EM G P+ V+ +C + +L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKC---------------------------- 287
G+ V +I LGM + NAL++MY K
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 288 --------GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
+D+ +++F +++V NTI++ Y + G+ +AL ++ EM +PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
T+ S + ++ D++ G+ HGYV+R G++ I ++++DMY K +
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR--------- 292
Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
+E + VFS + RD ISWN+++ G Q + EA+ L
Sbjct: 293 ----------------------IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRL 330
Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
FR M++ ++K V V AC +L L L K ++ Y+ + G ++ +A+ALVDM+++
Sbjct: 331 FRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK 390
Query: 520 CGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGV 579
CG+ + A ++F RM D +WTA I A+ G+G +AV LF EM RQG+KP+ + FV V
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450
Query: 580 LTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEP 639
LTACSH GLV++ W F SMT ++G++ ++ HY + DLLGRAG L EA + I M VEP
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510
Query: 640 NDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRL 699
+W +LL++C H+N+++A AE+I +D E G +VL+ N+YAS G+W +A++RL
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRL 570
Query: 700 QMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTN 759
+M+++G+RK P S IE+ K H F SGD SHP M+ I+ L+ + ++ GYV D +
Sbjct: 571 RMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSG 630
Query: 760 VLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYD 819
VL DVDE+ K+ LL HSE+LA+AFG+I+T IRV KN+R+C DCH K +SK+ +
Sbjct: 631 VLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITE 690
Query: 820 REIIVRDNNRFHFFRQGSCSCSDFW 844
REIIVRDN+RFH F +G+CSC D+W
Sbjct: 691 REIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 232/497 (46%), Gaps = 71/497 (14%)
Query: 100 SATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ 159
S + + S+IR ++ L +A++ +VE+ G PD FP VL +CT G
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 160 VHGAIVKMGFDRDVFVENCLINFYGE---------CGDIVDG------------------ 192
VHG IV++G D D++ N L+N Y + G++ D
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 193 ---------RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
RRVF+ M ++VVS+ ++I A+ + ++A+ + EM +KP+S T+
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
V+ ++ ++ G + Y+ G+ ++ + ++LVDMY K ++ ++++F R
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCH 363
+ + N++++ YV+ G EAL + +M+ +P V S + A A L L G+ H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 364 GYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
GYVLR G I + ++DMY KCG + A +IFD M+ VSW ++I G
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG-------- 418
Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
+ G H EA+ LF M + +K ++V V V +AC
Sbjct: 419 ------HALHGHGH-----------------EAVSLFEEMKRQGVKPNQVAFVAVLTACS 455
Query: 484 YLGALDLAKWIY--AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSA 540
++G +D A W Y + + G++ +++ A+ D+ R G + A +M + S
Sbjct: 456 HVGLVDEA-WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 541 WTAAIGAMAMEGNGEQA 557
W+ + + ++ N E A
Sbjct: 515 WSTLLSSCSVHKNLELA 531
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 168/329 (51%), Gaps = 10/329 (3%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
YN++I GY+ G+ +A+ + E+ + PD FT VL ++ +G ++HG ++
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
+ G D DV++ + L++ Y + I D RVF + R+ +SW SL+ + EA+
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
LF +MV +KP +V VI ACA L L LG ++ Y+ G +N + +ALVDMY
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
KCG + A+++F + V I+ + G EA+++ +EM G +P++V ++
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 346 AVSASAQLG--DLLCG---RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
++A + +G D G M Y L LE + ++ D+ + GK E A
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA----DLLGRAGKLEEAYNFISK 505
Query: 401 MSNKTVVS-WNSLIAGLIKNGDVESAREV 428
M + S W++L++ + ++E A +V
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 176/380 (46%), Gaps = 7/380 (1%)
Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
++ +Y + A LF K ++ +++ + L +ALA EM G PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC---GKQEMACR 396
S + + + DL G HG+++R G++ N +++MY K G +
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 397 IFDHMSNKTVVSWNSLIAG--LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE 454
+FD M +T S + + I ++S R VF MP +D +S+NT++ G Q M+E
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 455 EAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALV 514
+A+ + R M + +K D T+ V + K I+ Y+ + GI D+ + ++LV
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 515 DMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSI 574
DM+A+ + + +VF R+ RD +W + + G +A+ LF +M+ +KP ++
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 575 VFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKS 634
F V+ AC+H ++ G L + G I +VD+ + G + A +
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 635 MPVEPNDVIWGSLLAACQKH 654
M V ++V W +++ H
Sbjct: 404 MNV-LDEVSWTAIIMGHALH 422
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/817 (34%), Positives = 434/817 (53%), Gaps = 64/817 (7%)
Query: 49 KQPHCHILKQGLGHKPSYISKVVCT----CAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
KQ H H+ K G G ++ + C G K FD + N+ S
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA------VYKVFDRISERNQVS---- 166
Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK---SSAFGEGVQVH 161
+NSLI A+ + + + P FT V+ AC+ G QVH
Sbjct: 167 -WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225
Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
++ G + + F+ N L+ YG+ G + + + R++V+W +++ + + +
Sbjct: 226 AYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 284
Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELG-MKANALMVNAL 280
EA+ EMV EG++P+ T+ V+ AC+ L+ L G + AY + G + N+ + +AL
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 281 VDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPD 339
VDMY C V + +++F DR + L N +++ Y + +EAL + M G +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
TM V A + G HG+V++ GL+ + NT++DMY + GK ++A RIF
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF- 463
Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
+M RD ++WNTM+ G E+A+ L
Sbjct: 464 ------------------------------GKMEDRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 460 FRVMLS-ER----------IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQ 508
M + ER +K + +T++ + +C L AL K I+AY KN + D+
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553
Query: 509 LATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG 568
+ +ALVDM+A+CG Q + +VF ++ +++V W I A M GNG++A++L M+ QG
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613
Query: 569 IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEA 628
+KP+ + F+ V ACSH G+V++G +F M +GV P HY C+VDLLGRAG + EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 629 LDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYAS 687
L+ MP + N W SLL A + H N++I AA+ + +L+P + +VLL+NIY+S
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733
Query: 688 AGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCR 747
AG W VR MKEQG+RK PG S IE +VH+F +GD SHP+ +S L + R
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 748 LRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDC 807
+R GYVPD + VL +V+E EK+ LL HSEKLA+AFG+++TS IRV KNLR+C DC
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853
Query: 808 HSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
H K +SK+ DREII+RD RFH F+ G+CSC D+W
Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 186/646 (28%), Positives = 299/646 (46%), Gaps = 86/646 (13%)
Query: 62 HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVE 121
HK Y+ + T A +++ A F + E + L+R L E
Sbjct: 27 HKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPE------WWIDLLRSKVRSNLLRE 80
Query: 122 AISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRD-VFVENCLI 180
A+ YV++ GI PD + FP +L A G Q+H + K G+ D V V N L+
Sbjct: 81 AVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLV 140
Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
N Y +CGD +VFD +SERN VSW SLI + + + A+ F M++E ++P+S
Sbjct: 141 NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSF 200
Query: 241 TMVCVISACAKL---QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
T+V V++AC+ L + L +G +V AY G + N+ ++N LV MY K G + ++K L
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
G R+LV NT++S+ + EAL L EM+L G PD T+ S + A + L L
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Query: 358 CGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
G+ H Y L+NG L+ + + ++DMY C + R+FD M ++ + WN++IAG
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
+N + A +F M EE+ L + TM
Sbjct: 380 SQNEHDKEALLLFIGM---------------------EESAGLL---------ANSTTMA 409
Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
GV AC GA + I+ ++ K G+ D + L+DM++R G AM++F +ME R
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEML-----------RQGIKPDSIVFVGVLTACSH 585
D+ W I + E A+ L ++M R +KP+SI + +L +C+
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 586 GGLVNQGWHLF---------------RSMTDIHGVS-------------PQ--IVHYGCM 615
+ +G + ++ D++ PQ ++ + +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Query: 616 VDLLGRAGLLGEALDLIKSMPVE---PNDVIWGSLLAACQKHQNVD 658
+ G G EA+DL++ M V+ PN+V + S+ AAC VD
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 202/402 (50%), Gaps = 35/402 (8%)
Query: 34 PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV----CTCAQMGTFESLTYAQKA 89
P+ L+ +T EL H + LK G + S++ + C C Q+ + ++
Sbjct: 310 PACSHLEMLRTGKEL---HAYALKNGSLDENSFVGSALVDMYCNCKQVLS------GRRV 360
Query: 90 FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNAC 148
FD + ++N++I GYS EA+ L++ + G+L + T V+ AC
Sbjct: 361 FDGMFDRK-----IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 149 TKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
+S AF +HG +VK G DRD FV+N L++ Y G I R+F +M +R++V+W
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 209 SLICACARRDLPKEAVYLFFEM------VEEG-----IKPNSVTMVCVISACAKLQNLEL 257
++I + ++A+ L +M V +G +KPNS+T++ ++ +CA L L
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR 317
G + AY + + + + +ALVDMY KCG + ++++F + +N++ N I+ Y
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 318 LGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWD 375
G +EA+ +L M++ G +P+ VT +S +A + G + G YV++ G+E
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSS 654
Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSN--KTVVSWNSLIAG 415
++D+ + G+ + A ++ + M +W+SL+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 276/766 (36%), Positives = 429/766 (56%), Gaps = 44/766 (5%)
Query: 83 LTYAQKAFDYY-IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
LT A++ FD ++D L +NSLI GYS G EA+ +Y EL I+PD FT
Sbjct: 157 LTRARQVFDEMPVRD------LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTV 210
Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
VL A +G +HG +K G + V V N L+ Y + D RRVFDEM
Sbjct: 211 SSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV 270
Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
R+ VS+ ++IC + ++ +E+V +F E +++ KP+ +T+ V+ AC L++L L +
Sbjct: 271 RDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYI 329
Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG--ECKDRNLVLCNTIMSNYVRLG 319
Y+ + G + + N L+D+Y KCG + TA+ +F ECKD V N+I+S Y++ G
Sbjct: 330 YNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT--VSWNSIISGYIQSG 387
Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
EA+ + M++ + D +T L +S S +L DL G+ H +++G+ S+ N
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN 447
Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
+IDMY KCG +V + ++FS M D ++
Sbjct: 448 ALIDMYAKCG-------------------------------EVGDSLKIFSSMGTGDTVT 476
Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
WNT++ + F +++ M + D T + C L A L K I+ +
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536
Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
+ G ++Q+ AL++M+++CG + + +VF RM +RDV WT I A M G GE+A+E
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
F +M + GI PDS+VF+ ++ ACSH GLV++G F M + + P I HY C+VDLL
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL 656
Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
R+ + +A + I++MP++P+ IW S+L AC+ +++ A + RI EL+P+ G +
Sbjct: 657 SRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSI 716
Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
L SN YA+ KW V+ +R +K++ I K PG S IEV VH F+SGD+S P+ I
Sbjct: 717 LASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK 776
Query: 740 MLREMNCRLRDAGYVPDLTNVLLDV-DEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVV 798
L + + GY+PD V ++ +E+EK+ L+ HSE+LA+AFGL++T P++V+
Sbjct: 777 SLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVM 836
Query: 799 KNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
KNLR+C DCH KL+SK+ REI+VRD NRFH F+ G+CSC D W
Sbjct: 837 KNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/557 (28%), Positives = 275/557 (49%), Gaps = 40/557 (7%)
Query: 29 TPKDSPSIG-SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQ 87
T SP I +L + LNEL++ H ++ GL + K++ + F +
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLI---DKYSHFREPASSL 59
Query: 88 KAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA 147
F + + ++++NS+IR +S GL EA+ Y +L + PDK+TFP V+ A
Sbjct: 60 SVF----RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKA 115
Query: 148 CTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSW 207
C G V+ I+ MGF+ D+FV N L++ Y G + R+VFDEM R++VSW
Sbjct: 116 CAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSW 175
Query: 208 TSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
SLI + +EA+ ++ E+ I P+S T+ V+ A L ++ G + + +
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
G+ + ++ N LV MY+K A+++F E R+ V NT++ Y++L + E++ +
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM 295
Query: 328 LDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMK 387
E L +PD +T+ S + A L DL + + Y+L+ G ++ N +ID+Y K
Sbjct: 296 FLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 388 CGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGL 447
CG A +F+ M K VSWNS+I+G I++GD+
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDL------------------------- 389
Query: 448 TQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM 507
EAM+LF++M+ + D +T + + S L L K +++ K+GI D+
Sbjct: 390 ------MEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443
Query: 508 QLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ 567
++ AL+DM+A+CG+ ++++F M D W I A G+ +++ +M +
Sbjct: 444 SVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
Query: 568 GIKPDSIVFVGVLTACS 584
+ PD F+ L C+
Sbjct: 504 EVVPDMATFLVTLPMCA 520
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 279/812 (34%), Positives = 444/812 (54%), Gaps = 46/812 (5%)
Query: 39 LKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
LK C L +++ + H ++K G H +I V + + L+ A++ FD + +
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGY-HSTGFI--VNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 96 DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
+ ++NS++ YS G +E + L+ E+ G P+ +T L AC S
Sbjct: 246 KGDA----VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 156 EGVQVHGAIVKMG-FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
G ++H +++K +++V N LI Y CG + R+ +M+ +VV+W SLI
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
+ + KEA+ F +M+ G K + V+M +I+A +L NL G + AY+ + G +N
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
+ N L+DMY KC + F D++L+ T+++ Y + EAL + ++
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 335 GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSIC-NTMIDMYMKCGKQEM 393
D + + S + AS+ L +L + H ++LR GL D++ N ++D+Y KC
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL--LDTVIQNELVDVYGKCRNMGY 539
Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
A R+F+ + G+D +SW +M+
Sbjct: 540 ATRVFE-------------------------------SIKGKDVVSWTSMISSSALNGNE 568
Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
EA+ELFR M+ + D V ++ + SA L AL+ + I+ Y+ + G + +A A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
VDM+A CGD Q A VF R+E++ + +T+ I A M G G+ AVELF++M + + PD
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688
Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
I F+ +L ACSH GL+++G + M + + P HY C+VD+LGRA + EA + +K
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVK 748
Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
M EP +W +LLAAC+ H +I AA+R+ EL+P+ G VL+SN++A G+W +
Sbjct: 749 MMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWND 808
Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRL-RDAG 752
V +VR +MK G+ K PG S IE++GKVH+FT+ D+SHPE I L E+ +L R+ G
Sbjct: 809 VEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVG 868
Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
YV D VL +VDE EK +L HSE++A+A+GL+ T +R+ KNLR+C DCH+F K
Sbjct: 869 YVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCK 928
Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
LVSK++ R+I++RD NRFH F G CSC D W
Sbjct: 929 LVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/648 (27%), Positives = 313/648 (48%), Gaps = 82/648 (12%)
Query: 43 KTLNELKQPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSA 101
+ +++ +Q H I K + +++ K+V + G SL A+K FD
Sbjct: 94 RAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCG---SLDDAEKVFD-----EMPDR 145
Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
T F +N++I Y G A++LY + G+ +FP +L AC K G ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-NVVSWTSLICACARRDLP 220
+VK+G+ F+ N L++ Y + D+ RR+FD E+ + V W S++ + +
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV-NA 279
E + LF EM G PNS T+V ++AC +LG + A + + ++ L V NA
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 280 LVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPD 339
L+ MY +CG + A+++ + + ++V N+++ YV+ + +EAL +M+ G + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 340 RVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS---ICNTMIDMYMKCGKQEMACR 396
V+M S ++AS +L +LL G H YV+++ GWDS + NT+IDMY KC R
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKH---GWDSNLQVGNTLIDMYSKCNLTCYMGR 442
Query: 397 IFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEA 456
F M +K ++SW ++IAG +N + EA
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQN-------------------------------DCHVEA 471
Query: 457 MELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
+ELFR + +R+++D + + + A L ++ + K I+ +I + G+ D + LVD+
Sbjct: 472 LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDV 530
Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
+ +C + A +VF ++ +DV +WT+ I + A+ GN +AVELF M+ G+ DS+
Sbjct: 531 YGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590
Query: 577 VGVLTACSHGGLVNQGW----HLFR-----------SMTDIHGVSPQIVHYGCMVDLLGR 621
+ +L+A + +N+G +L R ++ D++ + + D + R
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650
Query: 622 AGLLG------------------EALDLIKSMPVEPNDVIWGSLLAAC 651
GLL E D ++ V P+ + + +LL AC
Sbjct: 651 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYAC 698
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 267/554 (48%), Gaps = 57/554 (10%)
Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKM--GFDRDVFVENCLINFYGECGDIVDGRRVFD 197
F +VL C K A +G Q+H I K F+ D F+ L+ YG+CG + D +VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 198 EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL 257
EM +R +W ++I A P A+ L++ M EG+ + ++ ACAKL+++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 258 GDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR-NLVLCNTIMSNYV 316
G + + + +LG + +VNALV MY K + A++LF +++ + VL N+I+S+Y
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 317 RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWD- 375
G + E L + EM + GP P+ T++SA++A G+ H VL++ +
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
+CN +I MY +CGK + A + +M
Sbjct: 321 YVCNALIAMYTRCGK-------------------------------MPQAERILRQMNNA 349
Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIY 495
D ++WN+++ G Q M++EA+E F M++ K D V+M + +A G L L ++
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 496 AYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGE 555
AY+ K+G ++Q+ L+DM+++C + F RM +D+ +WT I A
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 556 QAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGC- 614
+A+ELF ++ ++ ++ D ++ +L A S + +SM + + I+ G
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASS----------VLKSMLIVKEIHCHILRKGLL 519
Query: 615 -------MVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIAAYAAER 666
+VD+ G+ +G A + +S ++ DV+ W S++++ + N A R
Sbjct: 520 DTVIQNELVDVYGKCRNMGYATRVFES--IKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 667 ITELDPEKSGVHVL 680
+ E V +L
Sbjct: 578 MVETGLSADSVALL 591
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/572 (41%), Positives = 358/572 (62%), Gaps = 17/572 (2%)
Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI---LDEMLLHGPRPDRVTMLSA 346
+D A ++F + RN NTI+ + + +AI + M P+R T S
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG--------------KQE 392
+ A A+ G + G+ HG L+ G G + + + ++ MY+ CG +++
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 393 MACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENM 452
M + +V WN +I G ++ GD ++AR +F +M R +SWNTM+ G +
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATA 512
F++A+E+FR M I+ + VT+V V A LG+L+L +W++ Y E +GI D L +A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
L+DM+++CG ++A+ VF R+ + +V W+A I A+ G A++ F +M + G++P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
+ ++ +LTACSHGGLV +G F M + G+ P+I HYGCMVDLLGR+GLL EA + I
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 633 KSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWT 692
+MP++P+DVIW +LL AC+ NV++ A + ++ P SG +V LSN+YAS G W+
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 693 NVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG 752
V+ +RL+MKE+ IRK PG S I+++G +HEF D+SHP+ I+SML E++ +LR AG
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
Y P T VLL+++E++K+ +L +HSEK+A AFGLISTS PIR+VKNLR+C DCHS K
Sbjct: 555 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 614
Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
L+SKVY R+I VRD RFH F+ GSCSC D+W
Sbjct: 615 LISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 208/442 (47%), Gaps = 56/442 (12%)
Query: 38 SLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTF-ESLTYAQKAFDYYIKD 96
+ NC+T+ +L Q H +K G ++++ CA L YA K F+ +
Sbjct: 29 QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR 88
Query: 97 NETSATLFMYNSLIRGYSCIG--LGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSA 153
N F +N++IRG+S + AI+L+ E+ + P++FTFP VL AC K+
Sbjct: 89 N-----CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR-------------------- 193
EG Q+HG +K GF D FV + L+ Y CG + D R
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203
Query: 194 -------------------------RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
+FD+M +R+VVSW ++I + K+AV +F
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
EM + I+PN VT+V V+ A ++L +LELG+ + Y ++ G++ + ++ +AL+DMY KCG
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 289 AVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVS 348
++ A +F N++ + +++ + G A +A+ +M G RP V ++ ++
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 349 ASAQLGDLLCGRMCHGYVLR-NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT-V 406
A + G + GR ++ +GLE M+D+ + G + A +M K
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 407 VSWNSLIAGLIKNGDVESAREV 428
V W +L+ G+VE + V
Sbjct: 444 VIWKALLGACRMQGNVEMGKRV 465
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/739 (34%), Positives = 416/739 (56%), Gaps = 55/739 (7%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
YN +I GY G A L+ E+ D ++ ++ ++ G+ + +
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPE----RDLVSWNVMIKGYVRNRNLGKARE----LF 149
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
++ +RDV N +++ Y + G + D R VFD M E+N VSW +L+ A + +EA
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
LF + V+ C++ K + + + + D + ++ + + N ++ Y
Sbjct: 210 LFKSRENWAL----VSWNCLLGGFVKKKKIVEARQ---FFDSMNVR-DVVSWNTIITGYA 261
Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
+ G +D A+QLF E +++ ++S Y++ + EA + D+M P + V+
Sbjct: 262 QSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVS--- 314
Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
W N M+ Y++ + EMA +FD M +
Sbjct: 315 ----------------------------W----NAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
V +WN++I G + G + A+ +F +MP RD +SW M+ G +Q EA+ LF M
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
E +++R + S C + AL+L K ++ + K G + AL+ M+ +CG +
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
A +F+ M +D+ +W I + G GE A+ F M R+G+KPD V VL+ACSH
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
GLV++G F +MT +GV P HY CMVDLLGRAGLL +A +L+K+MP EP+ IWG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
+LL A + H N ++A AA++I ++PE SG++VLLSN+YAS+G+W +V ++R++M+++G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
++K+PG S IE+ K H F+ GDE HPE + I + L E++ R++ AGYV + VL DV+
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702
Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
E+EK+ ++ +HSE+LA+A+G++ S PIRV+KNLR+C DCH+ K ++++ R II+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762
Query: 826 DNNRFHFFRQGSCSCSDFW 844
DNNRFH F+ GSCSC D+W
Sbjct: 763 DNNRFHHFKDGSCSCGDYW 781
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 202/452 (44%), Gaps = 80/452 (17%)
Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVR---LGLAREALAI 327
+ +++ N ++ Y++ G + A++LF E +R+LV N ++ YVR LG ARE I
Sbjct: 92 RWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEI 151
Query: 328 LDE-------MLLHGPRP-----------DRVTMLSAVSASAQLGDLL-CGRMCHGYVLR 368
+ E +L G DR+ + VS +A L + +M +L
Sbjct: 152 MPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF 211
Query: 369 NGLEGWDSIC-NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
E W + N ++ ++K K A + FD M+ + VVSWN++I G ++G ++ AR+
Sbjct: 212 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
+F E P +D +W M+ G Q M EEA ELF M ER +V M+ GY+
Sbjct: 272 LFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-PERNEVSWNAMLA-----GYVQG 325
Query: 488 --LDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
+++AK ++ + + C ++ ++ +A+CG A +F +M KRD +W A
Sbjct: 326 ERMEMAKELF-----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380
Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS-----------HGGLVNQGW 593
I + G+ +A+ LF +M R+G + + F L+ C+ HG LV G+
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440
Query: 594 H------------------------LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
LF+ M IV + M+ R G AL
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 630 DLIKSMPVE---PNDVIWGSLLAACQKHQNVD 658
+SM E P+D ++L+AC VD
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 22/348 (6%)
Query: 96 DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
D +F + +++ GY + EA L F +P++ + NA G
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEAREL------FDKMPERNEVSW--NAMLAGYVQG 325
Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
E +++ + + R+V N +I Y +CG I + + +FD+M +R+ VSW ++I +
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
+ EA+ LF +M EG + N + +S CA + LELG ++ + + G +
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 445
Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
+ NAL+ MY KCG+++ A LF E +++V NT+++ Y R G AL + M G
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 336 PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT-----MIDMYMKCGK 390
+PD TM++ +SA + G + GR + Y + + + + N+ M+D+ + G
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQ-YFYTM---TQDYGVMPNSQHYACMVDLLGRAGL 561
Query: 391 QEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMP 433
E A + +M W +L+ +G+ E +A ++F+ P
Sbjct: 562 LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 28/353 (7%)
Query: 299 ECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLC 358
+C D ++ N +S+Y+R G EAL + M PR V+ +S + G+
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFEL 113
Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
R + L W N MI Y++ A +F+ M + V SWN++++G +
Sbjct: 114 ARKLFDEMPERDLVSW----NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ 169
Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
NG V+ AR VF MP ++ +SWN +L Q + EEA LF+ R V
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK---------SRENWALV 220
Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
+ C G + K + A + ++ D+ ++ +A+ G A Q+F +D
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
V WTA + E+A ELF++M + + + + +L G + LF
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
M + + M+ + G + EA +L MP + + V W +++A
Sbjct: 337 VMP-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 138/285 (48%), Gaps = 24/285 (8%)
Query: 379 NTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI 438
N I YM+ G+ A R+F M + VS+N +I+G ++NG+ E AR++F EMP RD +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 439 SWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI 498
SWN M+ G + +A ELF +M ER TM+ S G +D A+ ++ +
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIM-PERDVCSWNTML---SGYAQNGCVDDARSVFDRM 183
Query: 499 -EKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQA 557
EKN + + AL+ + + + A +F+ E + +W +G + +A
Sbjct: 184 PEKNDVSWN-----ALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 558 VELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSP--QIVHYGCM 615
+ F+ M + D + + ++T + G +++ LF SP + + M
Sbjct: 239 RQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAM 287
Query: 616 VDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
V + ++ EA +L MP E N+V W ++LA + + +++A
Sbjct: 288 VSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMA 331
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
D++ + + R G A++VF+RM + ++ I G E A +LF+EM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLL 625
+ + +++ G + + G + LF M + + + M+ + G +
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLG----KARELFEIMPE-----RDVCSWNTMLSGYAQNGCV 173
Query: 626 GEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
+A + MP E NDV W +LL+A ++ ++ A
Sbjct: 174 DDARSVFDRMP-EKNDVSWNALLSAYVQNSKMEEA 207
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/800 (32%), Positives = 433/800 (54%), Gaps = 48/800 (6%)
Query: 49 KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
+Q HC +K G S + +V T + F+ +K FD + N + + +
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD---GRKVFDEMKERN-----VVTWTT 164
Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
LI GY+ + E ++L++ + G P+ FTF L + G G+QVH +VK G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
D+ + V N LIN Y +CG++ R +FD+ ++VV+W S+I A L EA+ +F+
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 229 EMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCG 288
M ++ + + VI CA L+ L +++ + + G + + AL+ Y KC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 289 AVDTAKQLFGE--CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSA 346
A+ A +LF E C N+V ++S +++ EA+ + EM G RP+ T
Sbjct: 345 AMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 347 VSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTV 406
++A ++ H V++ E ++ ++D Y+K GK E A ++F + +K +
Sbjct: 404 LTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 407 VSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE 466
V+W++++AG + G+ E+A ++F E+ GG
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTK----------GG-------------------- 489
Query: 467 RIKVDRVTMVGVASACGYLGA-LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQR 525
IK + T + + C A + K + + K+ + + +++AL+ M+A+ G+ +
Sbjct: 490 -IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 526 AMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSH 585
A +VF+R ++D+ +W + I A G +A+++F EM ++ +K D + F+GV AC+H
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608
Query: 586 GGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWG 645
GLV +G F M ++P H CMVDL RAG L +A+ +I++MP IW
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR 668
Query: 646 SLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQG 705
++LAAC+ H+ ++ AAE+I + PE S +VLLSN+YA +G W A+VR M E+
Sbjct: 669 TILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728
Query: 706 IRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVD 765
++K PG S IEV K + F +GD SHP + I L +++ RL+D GY PD + VL D+D
Sbjct: 729 VKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDID 788
Query: 766 EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVR 825
++ K+ +L+ HSE+LA+AFGLI+T K P+ ++KNLR+C DCH KL++K+ +REI+VR
Sbjct: 789 DEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVR 848
Query: 826 DNNRFHFFRQ-GSCSCSDFW 844
D+NRFH F G CSC DFW
Sbjct: 849 DSNRFHHFSSDGVCSCGDFW 868
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/571 (26%), Positives = 259/571 (45%), Gaps = 41/571 (7%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
Y SL+ G+S G EA L++ + G+ D F VL G Q+H +
Sbjct: 61 YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI 120
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
K GF DV V L++ Y + + DGR+VFDEM ERNVV+WT+LI AR + E +
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
LF M EG +PNS T + A+ G +V + + G+ + N+L+++Y+
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
KCG V A+ LF + + +++V N+++S Y GL EAL + M L+ R + S
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NK 404
+ A L +L H V++ G +I ++ Y KC A R+F +
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML 464
VVSW ++I+G ++N E A ++FSEM + + N F + V+L
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-----------VRPNEFT-----YSVIL 404
Query: 465 SERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQ 524
T + V S ++A + K + TAL+D + + G +
Sbjct: 405 ---------TALPVISPSE----------VHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 525 RAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
A +VF ++ +D+ AW+A + A G E A+++F E+ + GIKP+ F +L C+
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 585 HGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIW 644
F + + ++ + + G + A ++ K E + V W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSW 564
Query: 645 GSLLAACQKH----QNVDIAAYAAERITELD 671
S+++ +H + +D+ +R ++D
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 183/395 (46%), Gaps = 32/395 (8%)
Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
+ + +FD+ R+ S+ SL+ +R +EA LF + G++ + V+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
A L + G ++ + G + + +LVD YMK +++F E K+RN+V
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
T++S Y R + E L + M G +P+ T +A+ A+ G G H V++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 369 NGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV 428
NGL+ + N++I++Y+KCG A +FD K+VV+WNS+I+G NG
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG-------- 274
Query: 429 FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGAL 488
+ EA+ +F M +++ + V C L L
Sbjct: 275 -----------------------LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 489 DLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
+ ++ + K G D + TAL+ +++C A+++F+ + +V +WTA I
Sbjct: 312 RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 548 MAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTA 582
E+AV+LF+EM R+G++P+ + +LTA
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 2/236 (0%)
Query: 415 GLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVT 474
G + + + +A +F + PGRD S+ ++L G +++ +EA LF + +++D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 475 MVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME 534
V L + ++ K G D+ + T+LVD + + + + +VF M+
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 535 KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWH 594
+R+V WT I A ++ + LF M +G +P+S F L + G+ +G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 595 LFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
+ ++ +G+ I +++L + G + +A L V+ + V W S+++
Sbjct: 216 V-HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG 269
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/726 (33%), Positives = 397/726 (54%), Gaps = 39/726 (5%)
Query: 158 VQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARR 217
Q H I+K G D ++ LI Y D V + + + S++SLI A +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 218 DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV 277
L +++ +F M G+ P+S + + CA+L ++G ++ G+ +A +
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
++ MYM+CG + A+++F D+++V C+ ++ Y R G E + IL EM G
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 338 -----------------------------------PDRVTMLSAVSASAQLGDLLCGRMC 362
PD+VT+ S + + L GR+
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
HGYV++ GL + + MIDMY K G +F+ N+ I GL +NG V
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 423 ESAREVFSEMPGR----DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
+ A E+F + + +SW +++ G Q EA+ELFR M +K + VT+ +
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
ACG + AL + + + + + ++ + +AL+DM+A+CG + VF M +++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
W + + +M G ++ + +F ++R +KPD I F +L+AC GL ++GW F+
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
M++ +G+ P++ HY CMV+LLGRAG L EA DLIK MP EP+ +WG+LL +C+ NVD
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
+A AAE++ L+PE G +VLLSNIYA+ G WT V +R +M+ G++K PG S I+V
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
+V+ +GD+SHP+++ I+ + E++ +R +G+ P+L L DV+EQE++ +L HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 779 KLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSC 838
KLA+ FGL++T P++V+KNLR+C DCH+ K +S REI +RD NRFH F+ G C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754
Query: 839 SCSDFW 844
SC DFW
Sbjct: 755 SCGDFW 760
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/581 (24%), Positives = 243/581 (41%), Gaps = 113/581 (19%)
Query: 50 QPHCHILKQGLGHKPSYIS-KVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
Q H ILK G YIS K++ + + F ++ T++ ++S
Sbjct: 36 QAHARILKSG-AQNDGYISAKLIASYSNYNCFNDADLVLQSI--------PDPTIYSFSS 86
Query: 109 LIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMG 168
LI + L ++I ++ + G++PD P + C + SAF G Q+H G
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 169 FDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFF 228
D D FV+ + + Y CG + D R+VFD MS+++VV+ ++L+CA AR+ +E V +
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 229 EMVEEGIK-----------------------------------PNSVTMVCVISACAKLQ 253
EM GI+ P+ VT+ V+ + +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
L +G + Y+ + G+ + +++A++DMY K G V LF + + +CN ++
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 314 NYVRLGLAR-----------------------------------EALAILDEMLLHGPRP 338
R GL EAL + EM + G +P
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
+ VT+ S + A + L GR HG+ +R L + + +IDMY KCG+ ++ +F
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
+ M K +V WNSL+ G +G +E M
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKA-------------------------------KEVMS 475
Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLA-KWIYAYIEKNGIHCDMQLATALVDMF 517
+F ++ R+K D ++ + SACG +G D K+ E+ GI ++ + +V++
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 518 ARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQA 557
R G Q A + + M + D W A + + ++ N + A
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/729 (35%), Positives = 396/729 (54%), Gaps = 36/729 (4%)
Query: 121 EAISLYVEL--AGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVF--VE 176
EA L+ ++ + LPD TF +L C + QVH VK+GFD + F V
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS 187
Query: 177 NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIK 236
N L+ Y E + +F+E+ E++ V++ +LI + L E+++LF +M + G +
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 237 PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
P+ T V+ A L + LG ++ A G +A + N ++D Y K V + L
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 297 FGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDL 356
F E + + V N ++S+Y + +L EM G + +S +A L L
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 357 LCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL 416
GR H L + + N+++DMY KC EM
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKC---EM----------------------- 401
Query: 417 IKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMV 476
E A +F +P R +SW ++ G Q+ + ++LF M ++ D+ T
Sbjct: 402 -----FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 477 GVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKR 536
V A +L L K ++A+I ++G ++ + LVDM+A+CG + A+QVF M R
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 537 DVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLF 596
+ +W A I A A G+GE A+ F +M+ G++PDS+ +GVLTACSH G V QG F
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 597 RSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
++M+ I+G++P+ HY CM+DLLGR G EA L+ MP EP++++W S+L AC+ H+N
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKN 636
Query: 657 VDIAAYAAERITELDP-EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSI 715
+A AAE++ ++ + +V +SNIYA+AG+W V V+ M+E+GI+K+P S +
Sbjct: 637 QSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Query: 716 EVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSH 775
EVN K+H F+S D++HP + I + E+ + GY PD ++V+ DVDEQ K L +
Sbjct: 697 EVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKY 756
Query: 776 HSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQ 835
HSE+LA+AF LIST + PI V+KNLR C DCH+ KL+SK+ REI VRD +RFH F +
Sbjct: 757 HSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSE 816
Query: 836 GSCSCSDFW 844
G CSC D+W
Sbjct: 817 GVCSCGDYW 825
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 230/473 (48%), Gaps = 44/473 (9%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
+N+LI GY GL E+I L++++ G P FTF VL A F G Q+H V
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
GF RD V N +++FY + +++ R +FDEM E + VS+ +I + ++ D + +++
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMV--NALVDM 283
F EM G + ++S A L +L++G ++ + L A++++ N+LVDM
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDM 395
Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
Y KC + A+ +F R V ++S YV+ GL L + +M R D+ T
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNG-LEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
+ + ASA LL G+ H +++R+G LE S + ++DMY KCG + A ++F+ M
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 403 NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRV 462
++ VSWN+LI+ NGD E+A F++
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAK------------------------------- 543
Query: 463 MLSERIKVDRVTMVGVASACGYLGALDL-AKWIYAYIEKNGIHCDMQLATALVDMFARCG 521
M+ ++ D V+++GV +AC + G ++ ++ A GI + ++D+ R G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 522 DPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN---GEQAVE-LFN-EMLRQG 568
A ++ M + D W++ + A + N E+A E LF+ E LR
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDA 656
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 165/383 (43%), Gaps = 36/383 (9%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
YN +I YS ++ + E+ G F F +L+ S+ G Q+H +
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
D + V N L++ Y +C + +F + +R VSWT+LI ++ L +
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
LF +M ++ + T V+ A A +L LG ++ A+I G N + LVDMY
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
KCG++ A Q+F E DRN V N ++S + G A+ +M+ G +PD V++L
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY-MKCGKQEMACRIFDHMSNK 404
++A + G + G E + + M +Y + K+ AC
Sbjct: 559 VLTACSHCG-----------FVEQGTEYFQA----MSPIYGITPKKKHYAC--------- 594
Query: 405 TVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGL---TQENMFEEAMELF 460
++ L +NG A ++ EMP D I W+++L +++ E A E
Sbjct: 595 -------MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Query: 461 RVMLSERIKVDRVTMVGVASACG 483
M R V+M + +A G
Sbjct: 648 FSMEKLRDAAAYVSMSNIYAAAG 670
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 105/199 (52%), Gaps = 1/199 (0%)
Query: 102 TLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVH 161
T + +LI GY GL + L+ ++ G + D+ TF VL A ++ G Q+H
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
I++ G +VF + L++ Y +CG I D +VF+EM +RN VSW +LI A A +
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMVNAL 280
A+ F +M+E G++P+SV+++ V++AC+ +E G + + G+ +
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 281 VDMYMKCGAVDTAKQLFGE 299
+D+ + G A++L E
Sbjct: 596 LDLLGRNGRFAEAEKLMDE 614
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 11/255 (4%)
Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
L R +++ G + N +++ ++ G+ A +++D M +K VS N++I+G
Sbjct: 29 FLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG 88
Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVML--SERIKVDRV 473
+K GDV SAR++F MP R ++W ++G + + F+EA +LFR M S D V
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCD--MQLATALVDMFARCGDPQRAMQVFR 531
T + C + ++A+ K G + + ++ L+ + A +F
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 532 RMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQ 591
+ ++D + I +G +++ LF +M + G +P F GVL A
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV------- 261
Query: 592 GWHLFRSMTDIHGVS 606
G H F +H +S
Sbjct: 262 GLHDFALGQQLHALS 276
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 154/389 (39%), Gaps = 40/389 (10%)
Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
DE+ K N + N ++ ++K G V +A+ LF DR +V +M Y R EA
Sbjct: 72 DEMPHK-NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAF 130
Query: 326 AILDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG--WDSICNTM 381
+ +M PD VT + + H + ++ G + + ++ N +
Sbjct: 131 KLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVL 190
Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
+ Y + + ++AC +F+ + K V++N+LI G K+G
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDG--------------------- 229
Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
++ E++ LF M + T GV A L L + ++A
Sbjct: 230 ----------LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279
Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
G D + ++D +++ +F M + D ++ I + + E ++ F
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLG 620
EM G + F +L+ ++ + G L + + I+H G +VD+
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYA 397
Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
+ + EA + KS+P + V W +L++
Sbjct: 398 KCEMFEEAELIFKSLP-QRTTVSWTALIS 425
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/553 (41%), Positives = 344/553 (62%), Gaps = 1/553 (0%)
Query: 293 AKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQ 352
A +F + ++ NL + N ++ + +A +ML PD +T + AS++
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
+ +L G H ++R G + + N+++ MY CG A RIF M + VVSW S+
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 413 IAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
+AG K G VE+ARE+F EMP R+ +W+ M+ G + N FE+A++LF M E + +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
MV V S+C +LGAL+ + Y Y+ K+ + ++ L TALVDMF RCGD ++A+ VF
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
+ + D +W++ I +A+ G+ +A+ F++M+ G P + F VL+ACSHGGLV +G
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
++ +M HG+ P++ HYGC+VD+LGRAG L EA + I M V+PN I G+LL AC+
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429
Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
++N ++A + ++ PE SG +VLLSNIYA AG+W + +R MKE+ ++K PG
Sbjct: 430 IYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGW 489
Query: 713 SSIEVNGKVHEFTSG-DESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKY 771
S IE++GK+++FT G D+ HPEM I E+ ++R GY + + DVDE+EK+
Sbjct: 490 SLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKES 549
Query: 772 LLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFH 831
+ HSEKLA+A+G++ T IR+VKNLR+C DCH+ KL+S+VY RE+IVRD NRFH
Sbjct: 550 SIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFH 609
Query: 832 FFRQGSCSCSDFW 844
FR G CSC D+W
Sbjct: 610 HFRNGVCSCRDYW 622
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 177/375 (47%), Gaps = 43/375 (11%)
Query: 34 PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
P + L++C + ++LK H +L+ L S+++ C TF T + Y
Sbjct: 14 PKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLL-GYAYG 72
Query: 94 IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSA 153
I + LF++N LIR +S +A Y ++ I PD TFPF++ A ++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 154 FGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI-- 211
G Q H IV+ GF DV+VEN L++ Y CG I R+F +M R+VVSWTS++
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 212 -CAC----------------------------ARRDLPKEAVYLFFEMVEEGIKPNSVTM 242
C C A+ + ++A+ LF M EG+ N M
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 243 VCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKD 302
V VIS+CA L LE G+R Y+ + M N ++ ALVDM+ +CG ++ A +F +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 303 RNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
+ + ++I+ G A +A+ +M+ G P VT + +SA +
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS----------- 361
Query: 363 HGYVLRNGLEGWDSI 377
HG ++ GLE ++++
Sbjct: 362 HGGLVEKGLEIYENM 376
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 207/484 (42%), Gaps = 79/484 (16%)
Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI-------NFYGECGDIVDGRRVF 196
+L +C S+F + +HG +++ DVFV + L+ F + +F
Sbjct: 18 LLQSC---SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLE 256
++ N+ + LI + P +A + +M++ I P+++T +I A ++++ +
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 257 LGDRVCAYIDELGMKANALMVNALVDMYM------------------------------- 285
+G++ + I G + + + N+LV MY
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
KCG V+ A+++F E RNL + +++ Y + +A+ + + M G + M+S
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 346 AVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKT 405
+S+ A LG L G + YV+++ + + ++DM+ +CG E A +F+ +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 406 VVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLS 465
+SW+S+I GL +G A FS+M LG + ++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQM---------ISLGFIPRD--------------- 350
Query: 466 ERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQ 524
VT V SAC + G ++ IY ++K+ GI ++ +VDM R G
Sbjct: 351 -------VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLA 403
Query: 525 RAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS---IVFVGVL 580
A +M K + A +GA + N E A + N +++ +KP+ V + +
Sbjct: 404 EAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK--VKPEHSGYYVLLSNI 461
Query: 581 TACS 584
AC+
Sbjct: 462 YACA 465
Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/236 (17%), Positives = 92/236 (38%), Gaps = 68/236 (28%)
Query: 57 KQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK--------------------- 95
++G+ + + V+ +CA +G E + ++A++Y +K
Sbjct: 242 REGVVANETVMVSVISSCAHLGALE---FGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298
Query: 96 DNETSATLF---------MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLN 146
D E + +F ++S+I+G + G +A+ + ++ G +P TF VL+
Sbjct: 299 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
Query: 147 ACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
AC+ +G++++ + K G + + C+++ G G + + +M
Sbjct: 359 ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH----- 413
Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
+KPN+ + ++ AC +N E+ +RV
Sbjct: 414 -----------------------------VKPNAPILGALLGACKIYKNTEVAERV 440
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/711 (35%), Positives = 397/711 (55%), Gaps = 37/711 (5%)
Query: 137 DKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVF 196
D+ TF +L K + G QVH +K+G D + V N LIN Y + R VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 197 DEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL-QNL 255
D MSER+++SW S+I A+ L EAV LF +++ G+KP+ TM V+ A + L + L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
L +V + ++ +++ + AL+D Y + + A+ LF E + +LV N +M+ Y
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGY 492
Query: 316 VRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG--LEG 373
+ + L + M G R D T+ + L + G+ H Y +++G L+
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 374 WDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP 433
W + + ++DMY+KCG D+ +A+ F +P
Sbjct: 553 W--VSSGILDMYVKCG-------------------------------DMSAAQFAFDSIP 579
Query: 434 GRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW 493
D ++W TM+ G + E A +F M + D T+ +A A L AL+ +
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
I+A K D + T+LVDM+A+CG A +F+R+E +++AW A + +A G
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
G++ ++LF +M GIKPD + F+GVL+ACSH GLV++ + RSM +G+ P+I HY
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
C+ D LGRAGL+ +A +LI+SM +E + ++ +LLAAC+ + + A ++ EL+P
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL 819
Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
S +VLLSN+YA+A KW + R MK ++K PG S IEV K+H F D S+ +
Sbjct: 820 DSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQ 879
Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
I +++M ++ GYVP+ L+DV+E+EK+ L +HSEKLA+AFGL+ST +
Sbjct: 880 TELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPST 939
Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
PIRV+KNLR+C DCH+ K ++KVY+REI++RD NRFH F+ G CSC D+W
Sbjct: 940 PIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 146/555 (26%), Positives = 248/555 (44%), Gaps = 48/555 (8%)
Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
F F+ NA T SS G H I+ + + F+ N LI+ Y +CG + RRVFD+M
Sbjct: 43 FGFLRNAIT-SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 201 ERNVVSWTSLICACARR-----DLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNL 255
+R++VSW S++ A A+ + ++A LF + ++ + + +T+ ++ C +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 256 ELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNY 315
+ Y ++G+ + + ALV++Y+K G V K LF E R++VL N ++ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 316 VRLGLAREALAILDEMLLHGPRPDRVT--MLSAVSA----SAQLGDLLCGRMCHGY---V 366
+ +G EA+ + G P+ +T +L+ +S + Q+ G +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281
Query: 367 LRN-GLEGW-------------------DSICN--TMIDMYMKCGK-------QEMACRI 397
RN GL + D C+ T I M K Q++ C
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 398 FDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAM 457
+ + NSLI K AR VF M RD ISWN+++ G+ Q + EA+
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 458 ELFRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWIYAYIEKNGIHCDMQLATALVDM 516
LF +L +K D+ TM V A L L L+K ++ + K D ++TAL+D
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDA 461
Query: 517 FARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVF 576
++R + A +F R D+ AW A + +G + ++LF M +QG + D
Sbjct: 462 YSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 577 VGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMP 636
V C +NQG + + G + ++D+ + G + A S+P
Sbjct: 521 ATVFKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 637 VEPNDVIWGSLLAAC 651
V P+DV W ++++ C
Sbjct: 580 V-PDDVAWTTMISGC 593
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/557 (40%), Positives = 350/557 (62%), Gaps = 2/557 (0%)
Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP--RPDRVTMLSAV 347
+D A Q+ + L N+++ + + + ++ +L G +PD T+ V
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 348 SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVV 407
A L G HG +R G + + +I +Y + G + ++F+ + V
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 408 SWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSER 467
+++ + GDV AR++F MP RD I+WN M+ G Q EA+ +F +M E
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
+KV+ V M+ V SAC LGALD +W ++YIE+N I ++LAT LVD++A+CGD ++AM
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGG 587
+VF ME+++V W++A+ +AM G GE+ +ELF+ M + G+ P+++ FV VL CS G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
V++G F SM + G+ PQ+ HYGC+VDL RAG L +A+ +I+ MP++P+ +W SL
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
L A + ++N+++ A++++ EL+ G +VLLSNIYA + W NV+ VR MK +G+R
Sbjct: 416 LHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVR 475
Query: 708 KLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQ 767
K PG S +EVNG+VHEF GD+SHP+ I ++ ++++ RLR AGY D T V+ D+DE+
Sbjct: 476 KQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEE 535
Query: 768 EKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
EK+ L HSEK A+AFG++S + +PIR+VKNLR+C DCH + ++SK+++REIIVRD
Sbjct: 536 EKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDR 595
Query: 828 NRFHFFRQGSCSCSDFW 844
NRFH F+ G CSC+ FW
Sbjct: 596 NRFHHFKDGHCSCNGFW 612
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 192/416 (46%), Gaps = 43/416 (10%)
Query: 34 PSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYY 93
P+I L + T E++Q H + G + V A + + L YA +
Sbjct: 8 PAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVA-LSDHKYLDYANQ----- 61
Query: 94 IKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL--AGFGILPDKFTFPFVLNACTKS 151
I D TLF NS+IR + + ++ Y + +G + PD +T F++ ACT
Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE-------------------------- 185
G+QVHG ++ GFD D V+ LI+ Y E
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 186 -----CGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSV 240
CGD+V R++F+ M ER+ ++W ++I A+ +EA+ +F M EG+K N V
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
M+ V+SAC +L L+ G +YI+ +K + LVD+Y KCG ++ A ++F
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
+++N+ ++ ++ G + L + M G P+ VT +S + + +G + G+
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 361 MCHGYVLRN--GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVS-WNSLI 413
H +RN G+E ++D+Y + G+ E A I M K + W+SL+
Sbjct: 362 R-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 178/407 (43%), Gaps = 66/407 (16%)
Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG--IKPNSVTMVCVISACAK 251
++ D + + + S+I A + +P+++ + ++ G +KP++ T+ ++ AC
Sbjct: 61 QILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTG 120
Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYM-------------------------- 285
L+ E G +V G + + L+ +Y
Sbjct: 121 LRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAM 180
Query: 286 -----KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDR 340
+CG V A++LF +R+ + N ++S Y ++G +REAL + M L G + +
Sbjct: 181 VTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
Query: 341 VTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
V M+S +SA QLG L GR H Y+ RN ++ + T++D+Y KCG E A +F
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300
Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
M K V +W+S + GL NG E+ +ELF
Sbjct: 301 MEEKNVYTWSSALNGLAMNG-------------------------------FGEKCLELF 329
Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
+M + + + VT V V C +G +D + + + GI ++ LVD++AR
Sbjct: 330 SLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYAR 389
Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
G + A+ + ++M K + W++ + A M N E V +ML
Sbjct: 390 AGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKML 436
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/527 (44%), Positives = 336/527 (63%), Gaps = 7/527 (1%)
Query: 325 LAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDM 384
+++ M H PD T + + L G+ H +L GL+ + ++++M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 385 YMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTML 444
Y CG A R+FD +K + +WNS++ K G ++ AR++F EMP R+ ISW+ ++
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 445 GGLTQENMFEEAMELFRVMLSER-----IKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
G ++EA++LFR M + ++ + TM V SACG LGAL+ KW++AYI+
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAV 558
K + D+ L TAL+DM+A+CG +RA +VF + K+DV A++A I +AM G ++
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 559 ELFNEML-RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVD 617
+LF+EM I P+S+ FVG+L AC H GL+N+G F+ M + G++P I HYGCMVD
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346
Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
L GR+GL+ EA I SMP+EP+ +IWGSLL+ + ++ A +R+ ELDP SG
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGA 406
Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
+VLLSN+YA G+W V +R +M+ +GI K+PG S +EV G VHEF GDES E I
Sbjct: 407 YVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERI 466
Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
+ML E+ RLR+AGYV D VLLD++E++K+ LS+HSEKLA+AF L+ T P+R+
Sbjct: 467 YAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRI 526
Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
+KNLR+C DCH K++SK++ REI+VRD NRFH FR GSCSC DFW
Sbjct: 527 IKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 40/342 (11%)
Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINF 182
IS+Y+ + + PD TFPF+L + G + H I+ G D+D FV L+N
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 183 YGECGD-------------------------------IVDGRRVFDEMSERNVVSWTSLI 211
Y CGD I D R++FDEM ERNV+SW+ LI
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 212 CACARRDLPKEAVYLFFEMV-----EEGIKPNSVTMVCVISACAKLQNLELGDRVCAYID 266
KEA+ LF EM E ++PN TM V+SAC +L LE G V AYID
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 267 ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRL-GLAREAL 325
+ ++ + ++ AL+DMY KCG+++ AK++F + V + M + + GL E
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 326 AILDEMLLH-GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN-GLEGWDSICNTMID 383
+ EM P+ VT + + A G + G+ ++ G+ M+D
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346
Query: 384 MYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVES 424
+Y + G + A M V+ W SL++G GD+++
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKT 388
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 38/284 (13%)
Query: 278 NALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP- 336
N++V+ Y K G +D A++LF E +RN++ + +++ YV G +EAL + EM L P
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 337 ----RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQE 392
RP+ TM + +SA +LG L G+ H Y+ + +E + +IDMY KCG E
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 393 MACRIFDHM-SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQEN 451
A R+F+ + S K V +++++I L G + ++FSEM D+I+ N+
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS--------- 302
Query: 452 MFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK-WIYAYIEKNGIHCDMQLA 510
VT VG+ AC + G ++ K + IE+ GI +Q
Sbjct: 303 ---------------------VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHY 341
Query: 511 TALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
+VD++ R G + A M + DV W + + M G+
Sbjct: 342 GCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 86 AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA------GFGILPDKF 139
A+K FD + N S ++ LI GY G EA+ L+ E+ F + P++F
Sbjct: 147 ARKLFDEMPERNVIS-----WSCLINGYVMCGKYKEALDLFREMQLPKPNEAF-VRPNEF 200
Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
T VL+AC + A +G VH I K + D+ + LI+ Y +CG + +RVF+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 200 -SERNVVSWTSLICACARRDLPKEAVYLFFEM-VEEGIKPNSVTMVCVISACAKLQNLEL 257
S+++V +++++IC A L E LF EM + I PNSVT V ++ AC +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 258 GDRVCA-YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFG 298
G I+E G+ + +VD+Y + G + A+
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 362
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/686 (34%), Positives = 380/686 (55%), Gaps = 31/686 (4%)
Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
Q+H +++ D F+ N L+ +F N+ + SLI
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
L E + LF + + G+ + T V+ AC + + +LG + + + + G + +
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
+L+ +Y G ++ A +LF E DR++V + S Y G REA+ + +M+ G +P
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
D ++ +SA +GDL G Y+ ++ + T++++Y KCGK
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK-------- 262
Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
+E AR VF M +D ++W+TM+ G + +E +E
Sbjct: 263 -----------------------MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
LF ML E +K D+ ++VG S+C LGALDL +W + I+++ ++ +A AL+DM+A
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG 578
+CG R +VF+ M+++D+ AAI +A G+ + + +F + + GI PD F+G
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 579 VLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVE 638
+L C H GL+ G F +++ ++ + + HYGCMVDL GRAG+L +A LI MP+
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 639 PNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVR 698
PN ++WG+LL+ C+ ++ +A + + L+P +G +V LSNIY+ G+W A VR
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539
Query: 699 LQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLT 758
M ++G++K+PG S IE+ GKVHEF + D+SHP + I + L ++ +R G+VP
Sbjct: 540 DMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTE 599
Query: 759 NVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVY 818
V DV+E+EK+ +L +HSEKLA+A GLIST IRVVKNLR+C DCH KL+SK+
Sbjct: 600 FVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKIT 659
Query: 819 DREIIVRDNNRFHFFRQGSCSCSDFW 844
REI+VRDNNRFH F GSCSC+D+W
Sbjct: 660 RREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 228/444 (51%), Gaps = 16/444 (3%)
Query: 28 TTPKDSPSIGSLKNCK----TLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
T P + + +K T+N LKQ H ++ L H ++ ++ +L
Sbjct: 5 TVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLK--------RTL 56
Query: 84 TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
+ Q + Y + + +F+YNSLI G+ L E + L++ + G+ FTFP
Sbjct: 57 FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 116
Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
VL ACT++S+ G+ +H +VK GF+ DV L++ Y G + D ++FDE+ +R+
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
VV+WT+L +EA+ LF +MVE G+KP+S +V V+SAC + +L+ G+ +
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236
Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
Y++E+ M+ N+ + LV++Y KCG ++ A+ +F ++++V +T++ Y +E
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
+ + +ML +PD+ +++ +S+ A LG L G + R+ + N +ID
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP----GRDHIS 439
MY KCG +F M K +V N+ I+GL KNG V+ + VF + D +
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416
Query: 440 WNTMLGGLTQENMFEEAMELFRVM 463
+ +L G + ++ + F +
Sbjct: 417 FLGLLCGCVHAGLIQDGLRFFNAI 440
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 200/449 (44%), Gaps = 47/449 (10%)
Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELG----------MKANALMVNALVDMYMKCGA 289
+++V V SA +K+Q ++ V ++ L + + +VN L+ +
Sbjct: 1 MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 60
Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
+ LF + N+ L N++++ +V L E L + + HG T + A
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
+ G H V+ KCG F+H V +
Sbjct: 121 CTRASSRKLGIDLHSLVV-------------------KCG--------FNH----DVAAM 149
Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
SL++ +G + A ++F E+P R ++W + G T EA++LF+ M+ +K
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQV 529
D +V V SAC ++G LD +WI Y+E+ + + + T LV+++A+CG ++A V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 530 FRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
F M ++D+ W+ I A ++ +ELF +ML++ +KPD VG L++C+ G +
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 590 NQG-WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLL 648
+ G W + S+ D H + ++D+ + G + ++ K M E + VI + +
Sbjct: 330 DLGEWGI--SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAI 386
Query: 649 AACQK--HQNVDIAAYAAERITELDPEKS 675
+ K H + A + + P+ S
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/752 (34%), Positives = 398/752 (52%), Gaps = 35/752 (4%)
Query: 92 YYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTK 150
+Y+ + LF +N L+ GY+ G EA+ LY + G + PD +TFP VL C
Sbjct: 149 WYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGG 208
Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
G +VH +V+ G++ D+ V N LI Y +CGD+ R +FD M R+++SW ++
Sbjct: 209 IPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268
Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
I + E + LFF M + P+ +T+ VISAC L + LG + AY+ G
Sbjct: 269 ISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF 328
Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
+ + N+L MY+ G+ A++LF + +++V T++S Y L +A+
Sbjct: 329 AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRM 388
Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGK 390
M +PD +T+ + +SA A LGDL G H ++ L + + N +I+MY KC
Sbjct: 389 MDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC-- 446
Query: 391 QEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQE 450
C ++ A ++F +P ++ ISW +++ GL
Sbjct: 447 ---KC--------------------------IDKALDIFHNIPRKNVISWTSIIAGLRLN 477
Query: 451 NMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLA 510
N EA+ R M ++ + +T+ +AC +GAL K I+A++ + G+ D L
Sbjct: 478 NRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP 536
Query: 511 TALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK 570
AL+DM+ RCG A F +K+DV++W + + G G VELF+ M++ ++
Sbjct: 537 NALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVR 595
Query: 571 PDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALD 630
PD I F+ +L CS +V QG F M D +GV+P + HY C+VDLLGRAG L EA
Sbjct: 596 PDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHK 654
Query: 631 LIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGK 690
I+ MPV P+ +WG+LL AC+ H +D+ +A+ I ELD + G ++LL N+YA GK
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGK 714
Query: 691 WTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRD 750
W VA+VR MKE G+ G S +EV GKVH F S D+ HP+ I+++L ++ +
Sbjct: 715 WREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE 774
Query: 751 AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSF 810
G + +D E + + HSE+ A+AFGLI+T MPI V KNL +C +CH
Sbjct: 775 VGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDT 834
Query: 811 AKLVSKVYDREIIVRDNNRFHFFRQGSCSCSD 842
K +SK REI VRD FH F+ G CSC D
Sbjct: 835 VKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/573 (25%), Positives = 253/573 (44%), Gaps = 71/573 (12%)
Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLI 180
EA+ L + + D+ F ++ C A EG +V+ + V + N +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 181 NFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKPNS 239
+ G++VD VF +MSERN+ SW L+ A++ EA+ L+ M+ G+KP+
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
T CV+ C + +L G V ++ G + + +VNAL+ MY+KCG V +A+ LF
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
R+++ N ++S Y G+ E L + M PD +T+ S +SA LGD G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
R H YV+ G S+CN++ MY+ G A ++F M K +VSW ++I+G
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY--- 373
Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVA 479
++ +P ++A++ +R+M + +K D +T+ V
Sbjct: 374 --------EYNFLP--------------------DKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 480 SACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVS 539
SAC LG LD ++ K + + +A L++M+++C +A+ +F + +++V
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI 465
Query: 540 AWTAAIGAMAMEGNGEQAVELFNEM----------------------------------L 565
+WT+ I + + +A+ +M L
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 566 RQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM-TDIHGVSPQIVHYGCMVDLLGRAGL 624
R G+ D + +L G +N W F S D+ + + Y G+ +
Sbjct: 526 RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTSWNILLTGYS----ERGQGSM 581
Query: 625 LGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
+ E D + V P+++ + SLL C K Q V
Sbjct: 582 VVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 115/285 (40%), Gaps = 7/285 (2%)
Query: 12 LATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVV 71
L + T + P + L C TL +L + L K IS V+
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG---VELHKLAIKARLISYVI 434
Query: 72 CTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAG 131
+ + KA D + N + + S+I G EA+ +++
Sbjct: 435 VANNLINMYSKCKCIDKALDIF--HNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 491
Query: 132 FGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVD 191
+ P+ T L AC + A G ++H +++ G D F+ N L++ Y CG +
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAK 251
F+ +++V SW L+ + R V LF MV+ ++P+ +T + ++ C+K
Sbjct: 552 AWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQL 296
Q + G + +++ G+ N +VD+ + G + A +
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKF 655
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 33/270 (12%)
Query: 49 KQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFM 105
K+ H H+L+ G+G P+ + + C +M T S +QK KD +
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK------KDVTS------ 565
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
+N L+ GYS G G + L+ + + PD+ TF +L C+KS +G+ +
Sbjct: 566 WNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME 625
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS-ERNVVSWTSLICACA---RRDLPK 221
G ++ C+++ G G++ + + +M + W +L+ AC + DL +
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 685
Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISA-CAKLQNLELGDRVCAYIDELGMKANALMVNA- 279
+ FE+ ++ + ++C + A C K + + R+ MK N L V+A
Sbjct: 686 LSAQHIFELDKKSV--GYYILLCNLYADCGKWREVAKVRRM--------MKENGLTVDAG 735
Query: 280 --LVDMYMKCGAVDTAKQLFGECKDRNLVL 307
V++ K A + + + K+ N VL
Sbjct: 736 CSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/651 (37%), Positives = 378/651 (58%), Gaps = 40/651 (6%)
Query: 203 NVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVC 262
+V SW S+I AR EA+ F M + + P + C I AC+ L ++ G +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 263 AYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAR 322
G +++ + +AL+ MY CG ++ A+++F E RN+V +++ Y G A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 323 EALAILDEMLLHGPRPDRVTML------SAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS 376
+A+++ ++L+ D L S +SA +++ H +V++ G + S
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 377 ICNTMIDMYMKCGKQEMAC--RIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
+ NT++D Y K G+ +A +IFD + +K VS+NS+++ ++G
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG-------------- 265
Query: 435 RDHISWNTMLGGLTQENMFEEAMELFRVMLSER-IKVDRVTMVGVASACGYLGALDLAKW 493
M EA E+FR ++ + + + +T+ V A + GAL + K
Sbjct: 266 -----------------MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308
Query: 494 IYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGN 553
I+ + + G+ D+ + T+++DM+ +CG + A + F RM+ ++V +WTA I M G+
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 554 GEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYG 613
+A+ELF M+ G++P+ I FV VL ACSH GL +GW F +M GV P + HYG
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 614 CMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPE 673
CMVDLLGRAG L +A DLI+ M ++P+ +IW SLLAAC+ H+NV++A + R+ ELD
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSS 488
Query: 674 KSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPE 733
G ++LLS+IYA AG+W +V RVR+ MK +G+ K PG S +E+NG+VH F GDE HP+
Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQ 548
Query: 734 MNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTM 793
I L E+N +L +AGYV + ++V DVDE+EK+ L HSEKLA+AFG+++T
Sbjct: 549 REKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS 608
Query: 794 PIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
+ VVKNLR+C DCH+ KL+SK+ DRE +VRD RFH F+ G CSC D+W
Sbjct: 609 TVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 234/484 (48%), Gaps = 56/484 (11%)
Query: 90 FDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT 149
F+ Y+ + +F +NS+I + G EA+ + + + P + +FP + AC+
Sbjct: 32 FNRYVDKTD----VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS 87
Query: 150 KSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTS 209
G Q H G+ D+FV + LI Y CG + D R+VFDE+ +RN+VSWTS
Sbjct: 88 SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 210 LICACARRDLPKEAVYLFFEMV------EEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
+I +AV LF +++ ++ + +S+ +V VISAC+++ L + + +
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 264 YIDELGMKANALMVNALVDMYMKC--GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
++ + G + N L+D Y K G V A+++F + D++ V N+IMS Y + G++
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQL------GDLLCGRMCHGYVLRNGLEGWD 375
EA + ++ ++V +A++ S L G L G+ H V+R GLE
Sbjct: 268 NEAFEVFRRLV-----KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 376 SICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR 435
+ ++IDMY KCG+ E A + FD M NK V SW ++IAG +G
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA------------- 369
Query: 436 DHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLG-ALDLAKWI 494
+A+ELF M+ ++ + +T V V +AC + G ++ +W
Sbjct: 370 ------------------AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411
Query: 495 YAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGN 553
A + G+ ++ +VD+ R G Q+A + +RM+ K D W++ + A + N
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471
Query: 554 GEQA 557
E A
Sbjct: 472 VELA 475
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 206/427 (48%), Gaps = 22/427 (5%)
Query: 13 ATPTVTTLTNQHKAKTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISK 69
+ + ++ K P S ++K C +L ++ KQ H G S
Sbjct: 57 SAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSA 116
Query: 70 VVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL 129
++ + G E A+K FD K N S T S+IRGY G ++A+SL+ +L
Sbjct: 117 LIVMYSTCGKLED---ARKVFDEIPKRNIVSWT-----SMIRGYDLNGNALDAVSLFKDL 168
Query: 130 A------GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFY 183
+ D V++AC++ A G +H ++K GFDR V V N L++ Y
Sbjct: 169 LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 184 GECGD--IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKP-NSV 240
+ G+ + R++FD++ +++ VS+ S++ A+ + EA +F +V+ + N++
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGEC 300
T+ V+ A + L +G + + +G++ + ++ +++DMY KCG V+TA++ F
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG- 359
K++N+ +++ Y G A +AL + M+ G RP+ +T +S ++A + G + G
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLIK 418
R + R G+E M+D+ + G + A + M K + W+SL+A
Sbjct: 409 RWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRI 468
Query: 419 NGDVESA 425
+ +VE A
Sbjct: 469 HKNVELA 475
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/617 (38%), Positives = 354/617 (57%), Gaps = 42/617 (6%)
Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILD 329
++ N+ + L+ Y V +A+++F E +RN+++ N ++ +YV G E + +
Sbjct: 70 LRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFG 129
Query: 330 EMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
M RPD T + A + G ++ GR HG + GL + N ++ MY KCG
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCG 189
Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREV--------------------- 428
A + D MS + VVSWNSL+ G +N + A EV
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249
Query: 429 ----------------FSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDR 472
F +M + +SWN M+G + M EA+EL+ M ++ + D
Sbjct: 250 AVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309
Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
V++ V ACG AL L K I+ YIE+ + ++ L AL+DM+A+CG ++A VF
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
M+ RDV +WTA I A G G AV LF+++ G+ PDSI FV L ACSH GL+ +G
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
F+ MTD + ++P++ H CMVDLLGRAG + EA I+ M +EPN+ +WG+LL AC+
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACR 489
Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
H + DI AA+++ +L PE+SG +VLLSNIYA AG+W V +R MK +G++K PG+
Sbjct: 490 VHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 549
Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYL 772
S++EVN +H F GD SHP+ + I L + ++++ GYVPD + L DV+E++K+
Sbjct: 550 SNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETH 609
Query: 773 LSHHSEKLAMAFGLISTSK-----TMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDN 827
L+ HSEKLA+ F L++T + IR+ KNLR+C DCH AKL+S++ REII+RD
Sbjct: 610 LAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDT 669
Query: 828 NRFHFFRQGSCSCSDFW 844
NRFH FR G CSC D+W
Sbjct: 670 NRFHVFRFGVCSCGDYW 686
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 209/506 (41%), Gaps = 97/506 (19%)
Query: 45 LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
+ L+ H I+ + L S K++ A + S A+K FD + N +
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVAS---ARKVFDEIPERN-----VI 106
Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNA--CTKSSAFGEGVQ--- 159
+ N +IR Y G E + ++ + G + PD +TFP VL A C+ + G +
Sbjct: 107 IINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 160 ----------VHGAIVKM----GF------------DRDVFVENCLINFYGECGDIVDGR 193
V +V M GF RDV N L+ Y + D
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 194 RV-------------------------------------FDEMSERNVVSWTSLICACAR 216
V F +M ++++VSW +I +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286
Query: 217 RDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALM 276
+P EAV L+ M +G +P++V++ V+ AC L LG ++ YI+ + N L+
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 277 VNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP 336
NAL+DMY KCG ++ A+ +F K R++V ++S Y G +A+A+ ++ G
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 337 RPDRVTMLSAVSASAQLGDLLCGRMCHG-----YVLRNGLEGWDSICNTMIDMYMKCGKQ 391
PD + ++ ++A + G L GR C Y + LE M+D+ + GK
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL----ACMVDLLGRAGKV 462
Query: 392 EMACRIFDHMS---NKTVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRDHISWNTML 444
+ A R MS N+ V W +L+ + D + +A ++F P + + +L
Sbjct: 463 KEAYRFIQDMSMEPNERV--WGALLGACRVHSDTDIGLLAADKLFQLAP--EQSGYYVLL 518
Query: 445 GGL-TQENMFEEAMELFRVMLSERIK 469
+ + +EE + +M S+ +K
Sbjct: 519 SNIYAKAGRWEEVTNIRNIMKSKGLK 544
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
+ +++ I + C+ L L+ +A D A +VF + +R+V I +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
G + V++F M ++PD F VL ACS G + G + S T + G+S +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFV 177
Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKHQNVDIA 660
+V + G+ G L EA ++ M DV+ W SL+ ++Q D A
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEM--SRRDVVSWNSLVVGYAQNQRFDDA 225
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/608 (38%), Positives = 354/608 (58%), Gaps = 8/608 (1%)
Query: 241 TMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVD---TAKQLF 297
TM C + C+K + L+ ++ A + + G+ ++ + + + + D A+ +F
Sbjct: 17 TMSC-LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLL 357
+ L N ++ + +L + ML + T S + A + L
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 358 CGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLI 417
H + + G E N++I+ Y G ++A +FD + VSWNS+I G +
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 418 KNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVG 477
K G ++ A +F +M ++ ISW TM+ G Q +M +EA++LF M + ++ D V++
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 478 VASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRD 537
SAC LGAL+ KWI++Y+ K I D L L+DM+A+CG+ + A++VF+ ++K+
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 538 VSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFR 597
V AWTA I A G+G +A+ F EM + GIKP+ I F VLTACS+ GLV +G +F
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 598 SMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNV 657
SM + + P I HYGC+VDLLGRAGLL EA I+ MP++PN VIWG+LL AC+ H+N+
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432
Query: 658 DIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEV 717
++ E + +DP G +V +NI+A KW A R MKEQG+ K+PG S+I +
Sbjct: 433 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL 492
Query: 718 NGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLD-VDEQEKKYLLSHH 776
G HEF +GD SHPE+ I S R M +L + GYVP+L +LLD VD+ E++ ++ H
Sbjct: 493 EGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQH 552
Query: 777 SEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
SEKLA+ +GLI T IR++KNLR+C DCH KL+SK+Y R+I++RD RFH FR G
Sbjct: 553 SEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDG 612
Query: 837 SCSCSDFW 844
CSC D+W
Sbjct: 613 KCSCGDYW 620
Score = 189 bits (481), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 211/431 (48%), Gaps = 46/431 (10%)
Query: 35 SIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYI 94
++ L+ C ELKQ H +LK GL I+K + C + + L YAQ FD +
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 95 KDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAF 154
+ + F++N +IRG+SC ++ LY + + +TFP +L AC+ SAF
Sbjct: 77 RPD-----TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD----------------- 197
E Q+H I K+G++ DV+ N LIN Y G+ +FD
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 198 --------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMV 243
+M+E+N +SWT++I + D+ KEA+ LF EM ++P++V++
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 244 CVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
+SACA+L LE G + +Y+++ ++ ++++ L+DMY KCG ++ A ++F K +
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASA-----QLGDLLC 358
++ ++S Y G REA++ EM G +P+ +T + ++A + + G L+
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK-TVVSWNSLIAGLI 417
M Y L+ +E + I +D+ + G + A R M K V W +L+
Sbjct: 372 YSMERDYNLKPTIEHYGCI----VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 418 KNGDVESAREV 428
+ ++E E+
Sbjct: 428 IHKNIELGEEI 438
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/763 (32%), Positives = 411/763 (53%), Gaps = 75/763 (9%)
Query: 157 GVQVHGAIVKMGFDR-DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
G+ +HG ++K G D D V + + FYG C + ++FDEM +R+ ++W ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
R ++AV LF EM G K TMV ++ C+ + G ++ Y+ LG+++N
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 276 MVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG 335
M N+L+ MY + G ++ ++++F KDRNL N+I+S+Y +LG +A+ +LDEM + G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 336 PRPDRVTMLSAVS-----------------------------------ASAQLGDLLCGR 360
+PD VT S +S A A+ G L G+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGL---- 416
HGY+LRN L + T+IDMY+K G A +FD M K +V+WNSL++GL
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 417 -IKN------------------------------GDVESAREVFSEMPGR----DHISWN 441
+K+ G E A +V +M + + +SW
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
+ G ++ F A+++F M E + + TM + G L L K ++ + +
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
+ CD +ATALVDM+ + GD Q A+++F ++ + +++W + AM G GE+ + F
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 562 NEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGR 621
+ ML G++PD+I F VL+ C + GLV +GW F M +G+ P I H CMVDLLGR
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 622 AGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLL 681
+G L EA D I++M ++P+ IWG+ L++C+ H+++++A A +R+ L+P S ++++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 682 SNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSML 741
N+Y++ +W +V R+R M+ +R S I+++ VH F + ++HP+ +I L
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Query: 742 REMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNL 801
++ ++ +GYVPD + + D+ + EK+ LL H+EKLAM +GLI PIRVVKN
Sbjct: 666 YKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNT 725
Query: 802 RLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
+C D H+ AK +S + +REI++++ R H FR G CSC+D W
Sbjct: 726 NICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 186/449 (41%), Gaps = 74/449 (16%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
+NSL+ GY+ GL +AI++ + G+ P + +L A + G +HG I+
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
+ DV+VE LI+ Y + G + R VFD M +N+V+W SL+ + L K+A
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
L M +EGIKP+++T N+L Y
Sbjct: 313 LMIRMEKEGIKPDAITW-----------------------------------NSLASGYA 337
Query: 286 KCGAVDTAKQLFGECKDR----NLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRV 341
G + A + G+ K++ N+V I S + G R AL + +M G P+
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397
Query: 342 TMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM 401
TM + + L L G+ HG+ LR L + ++DMY K G + A IF +
Sbjct: 398 TMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI 457
Query: 402 SNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFR 461
NK++ SWN ++ G M GR EE + F
Sbjct: 458 KNKSLASWNCMLMGY--------------AMFGRG-----------------EEGIAAFS 486
Query: 462 VMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN--GIHCDMQLATALVDMFAR 519
VML ++ D +T V S C G + W Y + ++ GI ++ + +VD+ R
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQ-EGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGA 547
G A + M K D + W A + +
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSS 574
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 273/810 (33%), Positives = 444/810 (54%), Gaps = 54/810 (6%)
Query: 48 LKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYN 107
L+Q C I K GL S +V A+ G SL+YA+K F+ + + TL N
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG---SLSYARKVFNQM--ETRNAVTL---N 278
Query: 108 SLIRGYSCIGLGVEAISLYVELAG-FGILPDKFTF---PFVLNACTKSSAFGEGVQVHGA 163
L+ G G EA L++++ + P+ + F + + +G +VHG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGH 338
Query: 164 IVKMGF-DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKE 222
++ G D V + N L+N Y +CG I D RRVF M++++ VSW S+I + E
Sbjct: 339 VITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIE 398
Query: 223 AVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
AV + M I P S T++ +S+CA L+ +LG ++ +LG+ N + NAL+
Sbjct: 399 AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMT 458
Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA-REALAILDEMLLHGPRPDRV 341
+Y + G ++ +++F + + V N+I+ R + EA+ G + +R+
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRI 518
Query: 342 TMLSAVSASAQ--LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFD 399
T S +SA + G+L G+ HG L+N + + N +I Y KCG
Sbjct: 519 TFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIACYGKCG---------- 566
Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQENMFEEAME 458
+++ ++FS M R D+++WN+M+ G + +A++
Sbjct: 567 ---------------------EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALD 605
Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFA 518
L ML ++D V SA + L+ ++A + + D+ + +ALVDM++
Sbjct: 606 LVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYS 665
Query: 519 RCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQG-IKPDSIVFV 577
+CG A++ F M R+ +W + I A G GE+A++LF M G PD + FV
Sbjct: 666 KCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFV 725
Query: 578 GVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPV 637
GVL+ACSH GL+ +G+ F SM+D +G++P+I H+ CM D+LGRAG L + D I+ MP+
Sbjct: 726 GVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPM 785
Query: 638 EPNDVIWGSLLAAC--QKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVA 695
+PN +IW ++L AC + ++ AAE + +L+PE + +VLL N+YA+ G+W ++
Sbjct: 786 KPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLV 845
Query: 696 RVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVP 755
+ R +MK+ ++K G S + + VH F +GD+SHP+ + I L+E+N ++RDAGYVP
Sbjct: 846 KARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVP 905
Query: 756 DLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIST-SKTMPIRVVKNLRLCCDCHSFAKLV 814
L D++++ K+ +LS+HSEKLA+AF L + S T+PIR++KNLR+C DCHS K +
Sbjct: 906 QTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYI 965
Query: 815 SKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
SK+ R+II+RD+NRFH F+ G+CSCSDFW
Sbjct: 966 SKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 232/503 (46%), Gaps = 39/503 (7%)
Query: 161 HGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLP 220
H + K D+DV++ N LIN Y E GD V R+VFDEM RN VSW ++ +R
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 221 KEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLEL--GDRVCAYIDELGMKANALMVN 278
KEA+ +MV+EGI N V V+ AC ++ ++ + G ++ + +L +A++ N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 279 ALVDMYMKC-GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR 337
L+ MY KC G+V A FG+ + +N V N+I+S Y + G R A I M G R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 338 PDRVTMLSAVSASAQLGD----LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
P T S V+ + L + LL MC + ++GL + + ++ + K G
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCT--IQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
A ++F+ M + V+ N L+ GL++ E A ++F +M +M
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-----------------NSMI 304
Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDM-QLATA 512
+ + E + ++LS + VG L + ++ ++ G+ M +
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVG----------LKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 513 LVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPD 572
LV+M+A+CG A +VF M +D +W + I + G +AVE + M R I P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 573 SIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLI 632
S + L++C+ G + + G+ + ++ L G L E +
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 633 KSMPVEPNDVIWGSLLAACQKHQ 655
SMP E + V W S++ A + +
Sbjct: 474 SSMP-EHDQVSWNSIIGALARSE 495
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 267/594 (44%), Gaps = 63/594 (10%)
Query: 75 AQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGI 134
A + T +S++ A+K FD N S + ++ GYS G EA+ ++ GI
Sbjct: 45 AYLETGDSVS-ARKVFDEMPLRNCVS-----WACIVSGYSRNGEHKEALVFLRDMVKEGI 98
Query: 135 LPDKFTFPFVLNACTKSSAFG--EGVQVHGAIVKMGFDRDVFVENCLINFYGEC-GDIVD 191
+++ F VL AC + + G G Q+HG + K+ + D V N LI+ Y +C G +
Sbjct: 99 FSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158
Query: 192 GRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTM-VCVISACA 250
F ++ +N VSW S+I ++ + A +F M +G +P T V +AC+
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 251 KLQ-NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCN 309
+ ++ L +++ I + G+ + + + LV + K G++ A+++F + + RN V N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 310 TIMSNYVRLGLAREALAILDEM--LLHGPRPDRVTMLSAV---SASAQLGDLLCGRMCHG 364
+M VR EA + +M ++ V +LS+ S + ++G L GR HG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHG 337
Query: 365 YVLRNGLEGW-DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVE 423
+V+ GL + I N +++MY KCG +
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCG-------------------------------SIA 366
Query: 424 SAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACG 483
AR VF M +D +SWN+M+ GL Q F EA+E ++ M I T++ S+C
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 484 YLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA 543
L L + I+ K GI ++ ++ AL+ ++A G ++F M + D +W +
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486
Query: 544 AIGAMAM-EGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDI 602
IGA+A E + +AV F R G K + I F VL+A S G I
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG-------KQI 539
Query: 603 HG------VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAA 650
HG ++ + ++ G+ G + + M ++V W S+++
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 201/430 (46%), Gaps = 47/430 (10%)
Query: 30 PKDSPSIGSLKNCKTLNELK---QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYA 86
P I SL +C +L K Q H LK G+ S + ++ A+ G L
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY---LNEC 469
Query: 87 QKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGV-EAISLYVELAGFGILPDKFTFPFVL 145
+K F + ++ S +NS+I + + EA+ ++ G ++ TF VL
Sbjct: 470 RKIFSSMPEHDQVS-----WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 146 NACTKSSAFGE-GVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSER-N 203
+A S +FGE G Q+HG +K + EN LI YG+CG++ ++F M+ER +
Sbjct: 525 SA-VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583
Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
V+W S+I +L +A+ L + M++ G + +S V+SA A + LE G V A
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA 643
Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
++++ ++ +ALVDMY KCG +D A + F RN N+++S Y R G E
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEE 703
Query: 324 ALAILDEMLLHGPR-PDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMI 382
AL + + M L G PD VT + +SA + G +L G + ++S M
Sbjct: 704 ALKLFETMKLDGQTPPDHVTFVGVLSACSHAG-----------LLEEGFKHFES----MS 748
Query: 383 DMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHI-SWN 441
D Y +A RI +H S V L + G+++ + +MP + ++ W
Sbjct: 749 DSY------GLAPRI-EHFSCMADV--------LGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 442 TMLGGLTQEN 451
T+LG + N
Sbjct: 794 TVLGACCRAN 803
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 359 GRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIK 418
R H + +N L+ +CN +I+ Y++ G A ++FD M + VSW +++G +
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 419 NGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGV 478
NG+ +EA+ R M+ E I ++ V V
Sbjct: 80 NGE-------------------------------HKEALVFLRDMVKEGIFSNQYAFVSV 108
Query: 479 ASACGYLGALDL--AKWIYAYIEKNGIHCDMQLATALVDMFARC-GDPQRAMQVFRRMEK 535
AC +G++ + + I+ + K D ++ L+ M+ +C G A+ F +E
Sbjct: 109 LRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEV 168
Query: 536 RDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVG-VLTACS 584
++ +W + I + G+ A +F+ M G +P F V TACS
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 473 VTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRR 532
V + V S G+ GA A++ ++ + KN + D+ L L++ + GD A +VF
Sbjct: 5 VPLSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDE 61
Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLV 589
M R+ +W + + G ++A+ +M+++GI + FV VL AC G V
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/614 (39%), Positives = 363/614 (59%), Gaps = 16/614 (2%)
Query: 245 VISACAKLQNLELGDRVCAYIDELGMK--ANALMVNALVDMYMKCGAVDTAKQLFGEC-- 300
++ CA L G + A + G+K + + NAL Y G + TA++LF E
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 301 KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGR 360
+++ V T++S++ R GL ++ + EM D V+++ A+L DL +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 361 MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNG 420
HG ++ G+ +CN ++DMY KCG RIF+ + K+VVSW ++ ++K
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 421 DVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSE-RIKVDRVTMVGVA 479
+E REVF EMP R+ ++W M+ G E +EL M+ ++ VT+ +
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 480 SACGYLGALDLAKWIYAYIEKNGI-------HCDMQLATALVDMFARCGDPQRAMQVFRR 532
SAC G L + +W++ Y K + + D+ + TALVDM+A+CG+ +M VFR
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 533 MEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQG 592
M KR+V W A +AM G G +++F +M+R+ +KPD + F VL+ACSH G+V++G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 593 WHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQ 652
W F S+ +G+ P++ HY CMVDLLGRAGL+ EA L++ MPV PN+V+ GSLL +C
Sbjct: 371 WRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 653 KHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGS 712
H V+IA + ++ P + +L+SN+Y + G+ +R ++++GIRK+PG
Sbjct: 430 VHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489
Query: 713 SSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL--LDVDEQEKK 770
SSI VN VH F+SGD SHP I L E+ R+R AGYVPD++ ++ + D +EK+
Sbjct: 490 SSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKE 549
Query: 771 YLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRF 830
L HSEKLA+ FGL+ T + P+ V KNLR+C DCHS K+VSKVYDREII+RD NRF
Sbjct: 550 QALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRF 609
Query: 831 HFFRQGSCSCSDFW 844
H F+ GSCSCSD+W
Sbjct: 610 HQFKGGSCSCSDYW 623
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 211/468 (45%), Gaps = 76/468 (16%)
Query: 143 FVLNACTKSSAFGEGVQVHGAIVKMGFDR--DVFVENCLINFYGECGDIVDGRRVFDE-- 198
+L C S G ++H + G + ++ N L FY G++V +++FDE
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 199 MSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELG 258
+SE++ V WT+L+ + +R L ++ LF EM + ++ + V++VC+ CAKL++L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 259 DRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECK----------------- 301
+ ++G+ + + NAL+DMY KCG V K++F E +
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 302 --------------DRNLVLCNTIMSNYVRLGLAREALAILDEMLLH-GPRPDRVTMLSA 346
+RN V +++ Y+ G RE L +L EM+ G + VT+ S
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 347 VSASAQLGDLLCGRMCHGYVLRNGL-----EGWDSIC--NTMIDMYMKCGKQEMACRIFD 399
+SA AQ G+L+ GR H Y L+ + +D + ++DMY KCG + + +F
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 400 HMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMEL 459
M + VV+WN+L +GL +G GR +++
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGK------------GR-------------------MVIDM 339
Query: 460 FRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFAR 519
F M+ E +K D +T V SAC + G +D + + G+ + +VD+ R
Sbjct: 340 FPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGR 398
Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
G + A + R M + + +G+ ++ G E A + E+++
Sbjct: 399 AGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ 446
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 191/436 (43%), Gaps = 61/436 (13%)
Query: 49 KQPHCHILKQGLGHKP-SYISKVVCTCAQMGTFESLTYAQKAFDYYI---KDNETSATLF 104
K+ H + GL P SY+S + + + AQK FD KDN
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQF--YASSGEMVTAQKLFDEIPLSEKDNVD----- 78
Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
+ +L+ +S GL V ++ L+VE+ + D + + C K G Q HG
Sbjct: 79 -WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVA 137
Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-------- 216
VKMG V V N L++ YG+CG + + +R+F+E+ E++VVSWT ++ +
Sbjct: 138 VKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGR 197
Query: 217 ---RDLP--------------------KEAVYLFFEMVEE-GIKPNSVTMVCVISACAKL 252
++P +E + L EMV G N VT+ ++SACA+
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 253 QNLELGDRVCAY-------IDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNL 305
NL +G V Y + E + ++ ALVDMY KCG +D++ +F + RN+
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNV 317
Query: 306 VLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGY 365
V N + S G R + + +M + +PD +T + +SA + G + G C
Sbjct: 318 VTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376
Query: 366 VLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHM---SNKTVVSWNSLIAGLIKNGDV 422
+ GLE M+D+ + G E A + M N+ V+ SL+ +G V
Sbjct: 377 LRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVL--GSLLGSCSVHGKV 434
Query: 423 ESA----REVFSEMPG 434
E A RE+ PG
Sbjct: 435 EIAERIKRELIQMSPG 450
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/678 (37%), Positives = 394/678 (58%), Gaps = 51/678 (7%)
Query: 170 DRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFE 229
DR++ N L++ Y + G+I + R+VFD M ERNVVSWT+L+ A LF++
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 230 MVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGA 289
M E+ N V+ ++ LQ+ + D C + + K N + +++ K G
Sbjct: 136 MPEK----NKVSWTVML--IGFLQDGRIDD-ACKLYEMIPDKDN-IARTSMIHGLCKEGR 187
Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
VD A+++F E +R+++ T+++ Y + +A I D M P++ +
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------PEKTEV------ 235
Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
W S M+ Y++ G+ E A +F+ M K V++
Sbjct: 236 -----------------------SWTS----MLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFE-EAMELFRVMLSERI 468
N++I+GL + G++ AR VF M R+ SW T++ + + N FE EA++LF +M + +
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIK-IHERNGFELEALDLFILMQKQGV 327
Query: 469 KVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQ 528
+ T++ + S C L +L K ++A + + D+ +A+ L+ M+ +CG+ ++
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGG 587
+F R +D+ W + I A G GE+A+++F EM L KP+ + FV L+ACS+ G
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 588 LVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
+V +G ++ SM + GV P HY CMVD+LGRAG EA+++I SM VEP+ +WGSL
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 648 LAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIR 707
L AC+ H +D+A + A+++ E++PE SG ++LLSN+YAS G+W +VA +R MK + +R
Sbjct: 508 LGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVR 567
Query: 708 KLPGSSSIEVNGKVHEFTSGD-ESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDE 766
K PG S EV KVH FT G SHPE +I +L E++ LR+AGY PD + L DVDE
Sbjct: 568 KSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDE 627
Query: 767 QEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRD 826
+EK L +HSE+LA+A+ L+ S+ +PIRV+KNLR+C DCH+ K++SKV +REII+RD
Sbjct: 628 EEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRD 687
Query: 827 NNRFHFFRQGSCSCSDFW 844
NRFH FR G CSC D+W
Sbjct: 688 ANRFHHFRNGECSCKDYW 705
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 11/235 (4%)
Query: 69 KVVCTCAQM----GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAIS 124
K V C M G + A++ FD + N+ S + ++I+ + G +EA+
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS-----WQTVIKIHERNGFELEALD 317
Query: 125 LYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYG 184
L++ + G+ P T +L+ C ++ G QVH +V+ FD DV+V + L+ Y
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 185 ECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEG-IKPNSVTMV 243
+CG++V + +FD ++++ W S+I A L +EA+ +F EM G KPN VT V
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 244 CVISACAKLQNLELGDRVCAYIDEL-GMKANALMVNALVDMYMKCGAVDTAKQLF 297
+SAC+ +E G ++ ++ + G+K +VDM + G + A ++
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 14/168 (8%)
Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGI 569
A + +R G A ++F + + +S+W + + A +LF+EM + I
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 570 KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEAL 629
I + G+++ G +++ +F M + +V + +V G + A
Sbjct: 80 ----ISWNGLVSGYMKNGEIDEARKVFDLMPE-----RNVVSWTALVKGYVHNGKVDVAE 130
Query: 630 DLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
L MP E N V W +L + +D A ++ E+ P+K +
Sbjct: 131 SLFWKMP-EKNKVSWTVMLIGFLQDGRIDDAC----KLYEMIPDKDNI 173
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/555 (41%), Positives = 343/555 (61%), Gaps = 34/555 (6%)
Query: 293 AKQLFGEC-KDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSAS 350
A ++F + K N+ + NT++ Y +G + A ++ EM + G PD T + A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 351 AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWN 410
+ D+ G H V+R+G + N+++ +Y CG
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG--------------------- 170
Query: 411 SLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV 470
DV SA +VF +MP +D ++WN+++ G + EEA+ L+ M S+ IK
Sbjct: 171 ----------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 471 DRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVF 530
D T+V + SAC +GAL L K ++ Y+ K G+ ++ + L+D++ARCG + A +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 531 RRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEM-LRQGIKPDSIVFVGVLTACSHGGLV 589
M ++ +WT+ I +A+ G G++A+ELF M +G+ P I FVG+L ACSH G+V
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 590 NQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLA 649
+G+ FR M + + + P+I H+GCMVDLL RAG + +A + IKSMP++PN VIW +LL
Sbjct: 341 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 400
Query: 650 ACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKL 709
AC H + D+A +A +I +L+P SG +VLLSN+YAS +W++V ++R QM G++K+
Sbjct: 401 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 460
Query: 710 PGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEK 769
PG S +EV +VHEF GD+SHP+ + I + L+EM RLR GYVP ++NV +DV+E+EK
Sbjct: 461 PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEK 520
Query: 770 KYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNR 829
+ + +HSEK+A+AF LIST + PI VVKNLR+C DCH KLVSKVY+REI+VRD +R
Sbjct: 521 ENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Query: 830 FHFFRQGSCSCSDFW 844
FH F+ GSCSC D+W
Sbjct: 581 FHHFKNGSCSCQDYW 595
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 205/391 (52%), Gaps = 17/391 (4%)
Query: 44 TLNELKQPHCHILKQGLGHKPSYISK-VVCTCAQMGTFESLTYAQKAFDYYIKDNETSAT 102
++ +L+Q H ++ G+ + + K ++ + + ++YA K F E
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFS----KIEKPIN 84
Query: 103 LFMYNSLIRGYSCIGLGVEAISLYVELAGFGIL-PDKFTFPFVLNACTKSSAFGEGVQVH 161
+F++N+LIRGY+ IG + A SLY E+ G++ PD T+PF++ A T + G +H
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 162 GAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPK 221
+++ GF ++V+N L++ Y CGD+ +VFD+M E+++V+W S+I A P+
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204
Query: 222 EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALV 281
EA+ L+ EM +GIKP+ T+V ++SACAK+ L LG RV Y+ ++G+ N N L+
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264
Query: 282 DMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEM-LLHGPRPDR 340
D+Y +CG V+ AK LF E D+N V +++ G +EA+ + M G P
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 324
Query: 341 VTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMAC 395
+T + + A + G + G RM Y + +E + M+D+ + G+ + A
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF----GCMVDLLARAGQVKKAY 380
Query: 396 RIFDHMS-NKTVVSWNSLIAGLIKNGDVESA 425
M VV W +L+ +GD + A
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/600 (37%), Positives = 350/600 (58%), Gaps = 32/600 (5%)
Query: 245 VISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
++ C + L G V A+I + + + +M N L++MY KCG+++ A+++F + R+
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 305 LVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHG 364
V T++S Y + +AL ++ML G P+ T+ S + A+A CG HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 365 YVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVES 424
+ ++ G + + + ++D+Y + G ++
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGL-------------------------------MDD 214
Query: 425 AREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGY 484
A+ VF + R+ +SWN ++ G + + E+A+ELF+ ML + + + + AC
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 485 LGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAA 544
G L+ KW++AY+ K+G L+DM+A+ G A ++F R+ KRDV +W +
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334
Query: 545 IGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHG 604
+ A A G G++AV F EM R GI+P+ I F+ VLTACSH GL+++GWH + M G
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DG 393
Query: 605 VSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAA 664
+ P+ HY +VDLLGRAG L AL I+ MP+EP IW +LL AC+ H+N ++ AYAA
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 665 ERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEF 724
E + ELDP+ G HV+L NIYAS G+W + ARVR +MKE G++K P S +E+ +H F
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 513
Query: 725 TSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAF 784
+ DE HP+ I+ E+ ++++ GYVPD ++V++ VD+QE++ L +HSEK+A+AF
Sbjct: 514 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 573
Query: 785 GLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
L++T I + KN+R+C DCH+ KL SKV REIIVRD NRFH F+ G+CSC D+W
Sbjct: 574 ALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 209/429 (48%), Gaps = 32/429 (7%)
Query: 128 ELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECG 187
+L G I D+ + +L CT +G VH I++ F D+ + N L+N Y +CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 188 DIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
+ + R+VF++M +R+ V+WT+LI ++ D P +A+ F +M+ G PN T+ VI
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 248 ACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVL 307
A A + G ++ + + G +N + +AL+D+Y + G +D A+ +F + RN V
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 308 CNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVL 367
N +++ + R +AL + ML G RP + S A + G L G+ H Y++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 368 RNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
++G + NT++DMY K G A +IFD ++ + VVSWNSL+ ++G
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF------ 343
Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
G++ + W FEE M I+ + ++ + V +AC + G
Sbjct: 344 ------GKEAVWW------------FEE-------MRRVGIRPNEISFLSVLTACSHSGL 378
Query: 488 LDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSA-WTAAIG 546
LD Y ++K+GI + +VD+ R GD RA++ M +A W A +
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 547 AMAMEGNGE 555
A M N E
Sbjct: 439 ACRMHKNTE 447
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 211/444 (47%), Gaps = 24/444 (5%)
Query: 17 VTTLTNQHKAKTTPKDSPSIGSL-KNCKTLNELKQP---HCHILKQGLGHKPSYISKVVC 72
+ T +N + P D +L K C L Q H HIL+ H + ++
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 73 TCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGF 132
A+ G+ E A+K F+ + + + +LI GYS +A+ + ++ F
Sbjct: 104 MYAKCGSLEE---ARKVFEKMPQRD-----FVTWTTLISGYSQHDRPCDALLFFNQMLRF 155
Query: 133 GILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDG 192
G P++FT V+ A G Q+HG VK GFD +V V + L++ Y G + D
Sbjct: 156 GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215
Query: 193 RRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKL 252
+ VFD + RN VSW +LI ARR ++A+ LF M+ +G +P+ + + AC+
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 253 QNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIM 312
LE G V AY+ + G K A N L+DMY K G++ A+++F R++V N+++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 313 SNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL- 371
+ Y + G +EA+ +EM G RP+ ++ LS ++A + G L G + + ++G+
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
Query: 372 -EGWDSICNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVE----SA 425
E W + T++D+ + G A R + M T W +L+ + + E +A
Sbjct: 396 PEAWHYV--TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 426 REVFS---EMPGRDHISWNTMLGG 446
VF + PG I +N G
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASG 477
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 468 IKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAM 527
I DR + C L + ++A+I ++ D+ + L++M+A+CG + A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 528 QVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS--- 584
+VF +M +RD WT I + A+ FN+MLR G P+ V+ A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 585 --------HGGLVNQGWHLFRSMTDIHGVSPQIVHYG-CMVDLLGRAGLLGEALDLIKSM 635
HG V G+ VH G ++DL R GL+ +A + ++
Sbjct: 176 RGCCGHQLHGFCVKCGF-------------DSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222
Query: 636 PVEPNDVIWGSLLAACQKHQNVDIA 660
NDV W +L+A + + A
Sbjct: 223 ESR-NDVSWNALIAGHARRSGTEKA 246
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/563 (39%), Positives = 346/563 (61%), Gaps = 6/563 (1%)
Query: 284 YMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTM 343
Y G + + LF + D +L L ++ GL +A + ++L P+ T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 344 LSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSN 403
S + + + G++ H +VL+ GL + ++D+Y K G A ++FD M
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 404 KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVM 463
+++VS ++I K G+VE+AR +F M RD +SWN M+ G Q +A+ LF+ +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 464 LSE-RIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGD 522
L+E + K D +T+V SAC +GAL+ +WI+ +++ + I ++++ T L+DM+++CG
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 523 PQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR-QGIKPDSIVFVGVLT 581
+ A+ VF ++D+ AW A I AM G + A+ LFNEM G++P I F+G L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 582 ACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPND 641
AC+H GLVN+G +F SM +G+ P+I HYGC+V LLGRAG L A + IK+M ++ +
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 642 VIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQM 701
V+W S+L +C+ H + + AE + L+ + SG++VLLSNIYAS G + VA+VR M
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
Query: 702 KEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVL 761
KE+GI K PG S+IE+ KVHEF +GD H + I +MLR+++ R++ GYVP+ VL
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549
Query: 762 LDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDRE 821
D++E EK+ L HSE+LA+A+GLIST P+++ KNLR+C DCH+ KL+SK+ R+
Sbjct: 550 QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRK 609
Query: 822 IIVRDNNRFHFFRQGSCSCSDFW 844
I++RD NRFH F GSCSC DFW
Sbjct: 610 IVMRDRNRFHHFTDGSCSCGDFW 632
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 214/468 (45%), Gaps = 59/468 (12%)
Query: 13 ATPTVTTLTNQHKAKTT-------PKDSPSIGSLKNCKTLNELKQPHCHILKQGLGHKPS 65
++P + T Q++ TT P + ++++E+ Q H IL+ L P
Sbjct: 3 SSPLLATSLPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPR 62
Query: 66 YISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISL 125
Y + + + ++ F I + LF++ + I S GL +A L
Sbjct: 63 YPVLNLKLHRAYASHGKIRHSLALFHQTIDPD-----LFLFTAAINTASINGLKDQAFLL 117
Query: 126 YVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGE 185
YV+L I P++FTF +L +C+ S G +H ++K G D +V L++ Y +
Sbjct: 118 YVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAK 173
Query: 186 CGDIVDGRRVFDEMSER-------------------------------NVVSWTSLICAC 214
GD+V ++VFD M ER ++VSW +I
Sbjct: 174 GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGY 233
Query: 215 ARRDLPKEAVYLFFEMVEEG-IKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
A+ P +A+ LF +++ EG KP+ +T+V +SAC+++ LE G + ++ ++ N
Sbjct: 234 AQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLN 293
Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML- 332
+ L+DMY KCG+++ A +F + +++V N +++ Y G +++AL + +EM
Sbjct: 294 VKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQG 353
Query: 333 LHGPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMK 387
+ G +P +T + + A A G + G M Y ++ +E + ++ + +
Sbjct: 354 ITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY----GCLVSLLGR 409
Query: 388 CGKQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPG 434
G+ + A +M+ + V W+S++ +GD +E+ + G
Sbjct: 410 AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIG 457
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/759 (33%), Positives = 403/759 (53%), Gaps = 78/759 (10%)
Query: 160 VHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICA-CARRD 218
VHG I+ GF + N LI+ Y + ++ R++FDE+SE + ++ T+++ CA D
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 219 LP--------------------------------KEAVYLFFEMVEEGIKPNSVTMVCVI 246
+ A+ LF +M EG KP++ T V+
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 247 SACAKLQNLELGDRVCAYIDELGMKANALMV----NALVDMYMKCGA----VDTAKQLFG 298
+ A + + E + C +K+ A + NALV +Y KC + + +A+++F
Sbjct: 156 AGLALVADDE---KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 299 ECKDRN--------------------------------LVLCNTIMSNYVRLGLAREALA 326
E +++ LV N ++S YV G +EAL
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 327 ILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYM 386
++ M+ G D T S + A A G L G+ H YVLR + N+++ +Y
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-HFDNSLVSLYY 331
Query: 387 KCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGG 446
KCGK + A IF+ M K +VSWN+L++G + +G + A+ +F EM ++ +SW M+ G
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCD 506
L + EE ++LF M E + G +C LGA + +A + K G
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 507 MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLR 566
+ AL+ M+A+CG + A QVFR M D +W A I A+ G+G +AV+++ EML+
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 567 QGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLG 626
+GI+PD I + VLTACSH GLV+QG F SM ++ + P HY ++DLL R+G
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 627 EALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYA 686
+A +I+S+P +P IW +LL+ C+ H N+++ AA+++ L PE G ++LLSN++A
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHA 631
Query: 687 SAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNC 746
+ G+W VARVR M+++G++K S IE+ +VH F D SHPE + L+++
Sbjct: 632 ATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGK 691
Query: 747 RLRDAGYVPDLTNVLLDVD-EQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCC 805
+R GYVPD + VL DV+ + K+ +L+ HSEK+A+AFGL+ IR+ KNLR C
Sbjct: 692 EMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCG 751
Query: 806 DCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
DCH+F + +S V R+II+RD RFH FR G CSC +FW
Sbjct: 752 DCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 210/527 (39%), Gaps = 108/527 (20%)
Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACT-KSSAFGEGVQVHGA 163
MYN++I G+S G AI+L+ ++ G PD FTF VL + + VQ H A
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 164 IVKMGFDRDVFVENCLINFYGECGD----IVDGRRVFDEMSERNVVSWTS---------- 209
+K G V N L++ Y +C + R+VFDE+ E++ SWT+
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 210 ----------------------LICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVIS 247
+I R +EA+ + MV GI+ + T VI
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 248 ACAKLQNLELGDRVCAYI---DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRN 304
ACA L+LG +V AY+ ++ + N+LV +Y KCG D A+ +F + ++
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 305 LVLCNTIMSNYVRLGLAREALAILDE-------------------------------MLL 333
LV N ++S YV G EA I E M
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
G P A+ + A LG G+ H +L+ G + S N +I MY KCG E
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
A ++F M VSWN+LIA L ++G A +V+ E
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE---------------------- 508
Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK-NGIHCDMQLATA 512
ML + I+ DR+T++ V +AC + G +D + + +E I
Sbjct: 509 ---------MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR 559
Query: 513 LVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAV 558
L+D+ R G A V + K W A + + GN E +
Sbjct: 560 LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 202/476 (42%), Gaps = 83/476 (17%)
Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMS 313
+L+L V I G + A ++N L+D+Y K ++ A+QLF E + + + T++S
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 314 NYVRLG---LAR------------------------------EALAILDEMLLHGPRPDR 340
Y G LAR A+ + +M G +PD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 341 VTMLSAVSASAQLGDLLCGRMC---HGYVLRNGLEGWDSICNTMIDMYMKCGKQ----EM 393
T S ++ A + D + C H L++G S+ N ++ +Y KC
Sbjct: 149 FTFASVLAGLALVAD--DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNTMLGGLTQENM 452
A ++FD + K SW +++ G +KNG + E+ M +++N M+ G
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 453 FEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI---EKNGIHCDMQL 509
++EA+E+ R M+S I++D T V AC G L L K ++AY+ E H D
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD--- 323
Query: 510 ATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTA-------------------------- 543
+LV ++ +CG A +F +M +D+ +W A
Sbjct: 324 -NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 544 -----AIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
I +A G GE+ ++LF+ M R+G +P F G + +C+ G G
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKH 654
+ I G + ++ + + G++ EA + ++MP + V W +L+AA +H
Sbjct: 443 LLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQH 496
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 201/456 (44%), Gaps = 74/456 (16%)
Query: 50 QPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTY-AQKAFDYYIKDNETSATLFM--- 105
Q H LK G G+ S + +V ++ + SL + A+K FD ++ +E S T M
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 106 ------------------------YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
YN++I GY G EA+ + + GI D+FT+
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFD---- 197
P V+ AC + G QVH +++ D +N L++ Y +CG + R +F+
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 198 ---------------------------EMSERNVVSWTSLICACARRDLPKEAVYLFFEM 230
EM E+N++SW +I A +E + LF M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 231 VEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV 290
EG +P I +CA L G + A + ++G ++ NAL+ MY KCG V
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVV 468
Query: 291 DTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSAS 350
+ A+Q+F + V N +++ + G EA+ + +EML G RPDR+T+L+ ++A
Sbjct: 469 EEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
Query: 351 AQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNK- 404
+ G + GR M Y + G + + +ID+ + GK A + + + K
Sbjct: 529 SHAGLVDQGRKYFDSMETVYRIPPGADHY----ARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 405 TVVSWNSLIAGLIKNGDVE----SAREVFSEMPGRD 436
T W +L++G +G++E +A ++F +P D
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 53/363 (14%)
Query: 336 PRPDRVTMLSAVSAS-------AQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKC 388
P PD V ++ A+ + L R HG ++ G + I N +ID+Y K
Sbjct: 3 PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKS 62
Query: 389 GKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMP--GRDHISWNTMLGG 446
+ A ++FD +S ++ ++++G +GD+ AR VF + P RD + +N M+ G
Sbjct: 63 SELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122
Query: 447 LTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWI--YAYIEKNGIH 504
+ N A+ LF M E K D T V + L A D + + +A K+G
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAG 181
Query: 505 CDMQLATALVDMFARCGDP----QRAMQVFRRMEKRDVSAWT------------------ 542
++ ALV ++++C A +VF + ++D +WT
Sbjct: 182 YITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL 241
Query: 543 --------------AAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGL 588
A I G ++A+E+ M+ GI+ D + V+ AC+ GL
Sbjct: 242 LEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 589 VNQGWHLFRSMTDIHGVSPQIVHY-GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSL 647
+ G + + S H+ +V L + G EA + + MP + + V W +L
Sbjct: 302 LQLGKQVHAYVLRREDFS---FHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNAL 357
Query: 648 LAA 650
L+
Sbjct: 358 LSG 360
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 262/774 (33%), Positives = 417/774 (53%), Gaps = 43/774 (5%)
Query: 78 GTFESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELA---GFG- 133
GT +T A + FD + N L +NS+IR +S G E+ L E+ G G
Sbjct: 233 GTHGFVTDALQLFDIMPERN-----LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 134 ILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGR 193
+PD T VL C + G G VHG VK+ D+++ + N L++ Y +CG I + +
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 194 RVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE--EGIKPNSVTMVCVISACAK 251
+F + +NVVSW +++ + + +M+ E +K + VT++ + C
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 252 LQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTI 311
L + Y + N L+ NA V Y KCG++ A+++F + + + N +
Sbjct: 408 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467
Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
+ + + R +L +M + G PD T+ S +SA ++L L G+ HG+++RN L
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 527
Query: 372 EGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSE 431
E + +++ +Y+ CG+ +FD M +K++V
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV------------------------ 563
Query: 432 MPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLA 491
SWNT++ G Q + A+ +FR M+ I++ ++M+ V AC L +L L
Sbjct: 564 -------SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
+ +AY K+ + D +A +L+DM+A+ G ++ +VF ++++ ++W A I +
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676
Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
G ++A++LF EM R G PD + F+GVLTAC+H GL+++G M G+ P + H
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 612 YGCMVDLLGRAGLLGEALDLIKSMPVEPNDV-IWGSLLAACQKHQNVDIAAYAAERITEL 670
Y C++D+LGRAG L +AL ++ E DV IW SLL++C+ HQN+++ A ++ EL
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 796
Query: 671 DPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDES 730
+PEK +VLLSN+YA GKW +V +VR +M E +RK G S IE+N KV F G+
Sbjct: 797 EPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERF 856
Query: 731 HPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTS 790
I S+ + ++ GY PD +V D+ E+EK L HSEKLA+ +GLI TS
Sbjct: 857 LDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTS 916
Query: 791 KTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
+ IRV KNLR+C DCH+ AKL+SKV +REI+VRDN RFH F+ G CSC D+W
Sbjct: 917 EGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 243/499 (48%), Gaps = 38/499 (7%)
Query: 93 YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKS 151
++ D S LF +N++I YS L E + ++E+ + +LPD FT+P V+ AC
Sbjct: 141 FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 200
Query: 152 SAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLI 211
S G G+ VHG +VK G DVFV N L++FYG G + D ++FD M ERN+VSW S+I
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
Query: 212 CACARRDLPKEAVYLFFEMVEE----GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDE 267
+ +E+ L EM+EE P+ T+V V+ CA+ + + LG V + +
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 268 LGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAI 327
L + ++ NAL+DMY KCG + A+ +F ++N+V NT++ + G +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 328 LDEMLLHGP--RPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMY 385
L +ML G + D VT+L+AV L + H Y L+ + + N + Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 386 MKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLG 445
KCG A R+F + +KTV SWN+LI G ++ D + + +M +
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK----------IS 490
Query: 446 GLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC 505
GL D T+ + SAC L +L L K ++ +I +N +
Sbjct: 491 GLLP---------------------DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
D+ + +++ ++ CG+ +F ME + + +W I G ++A+ +F +M+
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 566 RQGIKPDSIVFVGVLTACS 584
GI+ I + V ACS
Sbjct: 590 LYGIQLCGISMMPVFGACS 608
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 192/411 (46%), Gaps = 34/411 (8%)
Query: 179 LINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVE-EGIKP 237
+I Y CG D R VFD + +N+ W ++I + +R +L E + F EM+ + P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 238 NSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLF 297
+ T CVI ACA + ++ +G V + + G+ + + NALV Y G V A QLF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 298 GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPR----PDRVTMLSAVSASAQL 353
+RNLV N+++ + G + E+ +L EM+ PD T+++ + A+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 354 GDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLI 413
++ G+ HG+ ++ L+ + N ++DMY KCG A IF +NK VVSWN+++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 414 AGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRV 473
G GD +V +M + GG E +K D V
Sbjct: 366 GGFSAEGDTHGTFDVLRQM----------LAGG-------------------EDVKADEV 396
Query: 474 TMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRM 533
T++ C + L K ++ Y K + +A A V +A+CG A +VF +
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456
Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACS 584
+ V++W A IG A + +++ +M G+ PDS +L+ACS
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 213/395 (53%), Gaps = 19/395 (4%)
Query: 45 LNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLF 104
L LK+ HC+ LKQ + + V + A+ G SL+YAQ+ F + I+ S T+
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCG---SLSYAQRVF-HGIR----SKTVN 462
Query: 105 MYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAI 164
+N+LI G++ ++ ++++ G+LPD FT +L+AC+K + G +VHG I
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 165 VKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAV 224
++ +RD+FV +++ Y CG++ + +FD M ++++VSW ++I + P A+
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 225 YLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMY 284
+F +MV GI+ ++M+ V AC+ L +L LG AY + ++ +A + +L+DMY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 285 MKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTML 344
K G++ + ++F K+++ N ++ Y GLA+EA+ + +EM G PD +T L
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 345 SAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF- 398
++A G + G +M + L+ L+ + + IDM + G+ + A R+
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDMLGRAGQLDKALRVVA 758
Query: 399 DHMSNKTVVS-WNSLIAGLIKNGDVESAREVFSEM 432
+ MS + V W SL++ + ++E +V +++
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL 793
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 31/345 (8%)
Query: 245 VISACAKLQNLELGDRVCAYID-ELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDR 303
++ A K +++E+G ++ + ++ + ++ ++ MY CG+ D ++ +F + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 304 NLVLCNTIMSNYVRLGLAREALAILDEML-LHGPRPDRVTMLSAVSASAQLGDLLCGRMC 362
NL N ++S+Y R L E L EM+ PD T + A A + D+ G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 363 HGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDV 422
HG V++ GL + N ++ Y G A ++FD M + +VSWNS+I NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG-- 267
Query: 423 ESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASAC 482
FSE +LG + +EN M D T+V V C
Sbjct: 268 ------FSEES-------FLLLGEMMEENGDGAFMP------------DVATLVTVLPVC 302
Query: 483 GYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWT 542
+ L K ++ + K + ++ L AL+DM+++CG A +F+ ++V +W
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 543 AAIGAMAMEGNGEQAVELFNEMLRQG--IKPDSIVFVGVLTACSH 585
+G + EG+ ++ +ML G +K D + + + C H
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 506 DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEML 565
D L T ++ M+A CG P + VF + +++ W A I + + ++ +E F EM+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 566 R-QGIKPDSIVFVGVLTACSHGGLVNQGWHL-FRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
+ PD + V+ AC+ G+ + G L + G+ + +V G G
Sbjct: 179 STTDLLPDHFTYPCVIKACA--GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 624 LLGEALDLIKSMPVEPNDVIWGSLL 648
+ +AL L MP E N V W S++
Sbjct: 237 FVTDALQLFDIMP-ERNLVSWNSMI 260
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/666 (36%), Positives = 374/666 (56%), Gaps = 42/666 (6%)
Query: 123 ISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQ-VHGAIVKMGFDRDVFVENCLIN 181
+ L +L+ F D F +L++C KS V+ VH +++K GF ++F++N LI+
Sbjct: 7 LKLAADLSSF---TDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLID 63
Query: 182 FYGECGDIVDGRRVFDEMSERNVVSWTSLICACAR-----------RDLPK--------- 221
Y +CG + DGR+VFD+M +RN+ +W S++ + R +P+
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 222 -----------EAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGM 270
EA+ F M +EG N + V+SAC+ L ++ G +V + I +
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF 183
Query: 271 KANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDE 330
++ + +ALVDMY KCG V+ A+++F E DRN+V N++++ + + G A EAL +
Sbjct: 184 LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQM 243
Query: 331 MLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSI-CNTMIDMYMKCG 389
ML PD VT+ S +SA A L + G+ HG V++N D I N +DMY KC
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 390 KQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQ 449
+ + A IFD M + V++ S+I+G ++AR +F++M R+ +SWN ++ G TQ
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 450 ENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC---- 505
EEA+ LF ++ E + + + AC L L L + ++ K+G
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 506 --DMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNE 563
D+ + +L+DM+ +CG + VFR+M +RD +W A I A G G +A+ELF E
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483
Query: 564 MLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAG 623
ML G KPD I +GVL+AC H G V +G H F SMT GV+P HY CMVDLLGRAG
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAG 543
Query: 624 LLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSN 683
L EA +I+ MP++P+ VIWGSLLAAC+ H+N+ + Y AE++ E++P SG +VLLSN
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603
Query: 684 IYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLRE 743
+YA GKW +V VR M+++G+ K PG S I++ G H F D+SHP I S+L
Sbjct: 604 MYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDI 663
Query: 744 MNCRLR 749
+ +R
Sbjct: 664 LIAEMR 669
Score = 199 bits (507), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 230/488 (47%), Gaps = 71/488 (14%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
+NS++ G++ EA+ + + G + ++++F VL+AC+ + +GVQVH I
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
K F DV++ + L++ Y +CG++ D +RVFDEM +RNVVSW SLI + EA+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA-YIDELGMKANALMVNALVDMY 284
+F M+E ++P+ VT+ VISACA L +++G V + ++ + ++ NA VDMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 285 MKC-------------------------------GAVDTAKQLFGECKDRNLVLCNTIMS 313
KC + A+ +F + +RN+V N +++
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 314 NYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEG 373
Y + G EAL++ + P + + + A A L +L G H +VL++G +
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 374 WDS------ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESARE 427
+ N++IDMY+KCG E +F M + VSWN++I G +NG A E
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 428 VFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGA 487
+F E ML K D +TM+GV SACG+ G
Sbjct: 480 LFRE-------------------------------MLESGEKPDHITMIGVLSACGHAGF 508
Query: 488 LDLAKWIYAYIEKN-GIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAI 545
++ + ++ + ++ G+ T +VD+ R G + A + M + D W + +
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Query: 546 GAMAMEGN 553
A + N
Sbjct: 569 AACKVHRN 576
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/705 (36%), Positives = 371/705 (52%), Gaps = 34/705 (4%)
Query: 143 FVLNACTKSSAFGEGVQVHGAIVK-MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
+L +S+ G VH IVK + F+ N LIN Y + R V
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
RNVVSWTSLI A+ A+ FFEM EG+ PN T C A A L+ G ++
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
A + G + + + DMY K D A++LF E +RNL N +SN V G
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 322 REALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTM 381
REA+ E P+ +T + ++A + L G HG VLR+G + S+CN +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 382 IDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWN 441
ID Y KC + + S+ +F+EM ++ +SW
Sbjct: 251 IDFYGKCKQ-------------------------------IRSSEIIFTEMGTKNAVSWC 279
Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
+++ Q + E+A L+ + ++ + V SAC + L+L + I+A+ K
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELF 561
+ + + +ALVDM+ +CG + + Q F M ++++ + IG A +G + A+ LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 562 NEMLRQGI--KPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
EM +G P+ + FV +L+ACS G V G +F SM +G+ P HY C+VD+L
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
GRAG++ A + IK MP++P +WG+L AC+ H + AAE + +LDP+ SG HV
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519
Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
LLSN +A+AG+W VR ++K GI+K G S I V +VH F + D SH I +
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579
Query: 740 MLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
L ++ + AGY PDL L D++E+EK +SHHSEKLA+AFGL+S ++PIR+ K
Sbjct: 580 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITK 639
Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
NLR+C DCHSF K VS REIIVRDNNRFH F+ G CSC D+W
Sbjct: 640 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 204/457 (44%), Gaps = 41/457 (8%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
+ SLI G + G A+ + E+ G++P+ FTFP A G Q+H V
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
K G DVFV + Y + D R++FDE+ ERN+ +W + I P+EA+
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
F E PNS+T ++AC+ +L LG ++ + G + + N L+D Y
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT--- 342
KC + +++ +F E +N V ++++ YV+ +A +L R D V
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA-----SVLYLRSRKDIVETSD 310
Query: 343 -MLSAV-SASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
M+S+V SA A + L GR H + ++ +E + + ++DMY KCG E + + FD
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
M K +V+ NSLI G G V+ A +F EM R G T M
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG--------CGPTPNYM-------- 414
Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN-GIHCDMQLATALVDMFAR 519
T V + SAC GA++ I+ + GI + + +VDM R
Sbjct: 415 -------------TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGE 555
G +RA + ++M + +S W A A M G +
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 188/383 (49%), Gaps = 49/383 (12%)
Query: 86 AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVL 145
A+K FD + N + F+ NS+ G EAI ++E P+ TF L
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRP-----REAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 146 NACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVV 205
NAC+ G+Q+HG +++ GFD DV V N LI+FYG+C I +F EM +N V
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 276
Query: 206 SWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI 265
SW SL+ A + ++A L+ ++ ++ + + V+SACA + LELG + A+
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 336
Query: 266 DELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREAL 325
+ ++ + +ALVDMY KCG ++ ++Q F E ++NLV N+++ Y G AL
Sbjct: 337 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL 396
Query: 326 AILDEMLLH--GPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
A+ +EM GP P+ +T +S +SA ++ G + NG++ +DS+ +T
Sbjct: 397 ALFEEMAPRGCGPTPNYMTFVSLLSACSRAG-----------AVENGMKIFDSMRST--- 442
Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS-WNT 442
++ G + +C ++ L + G VE A E +MP + IS W
Sbjct: 443 YGIEPGAEHYSC----------------IVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 443 M-----------LGGLTQENMFE 454
+ LG L EN+F+
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFK 509
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/599 (39%), Positives = 350/599 (58%), Gaps = 10/599 (1%)
Query: 254 NLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAV--DTAKQLFGECKDRNLVLCNTI 311
NL ++ ++ G+ + ++ L+ K G A+++ + RN L +
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 312 MSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGL 371
+ Y G EA+A+ M P T + + A + DL GR H R L
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR--L 178
Query: 372 EGW--DSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
G+ + NTMIDMY+KC + A ++FD M + V+SW LIA + G++E A E+F
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
+P +D ++W M+ G Q +EA+E F M I+ D VT+ G SAC LGA
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 490 LAKWIYAYIEKNGIHCD--MQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGA 547
A +K+G + + +AL+DM+++CG+ + A+ VF M ++V +++ I
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 548 MAMEGNGEQAVELFNEMLRQG-IKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVS 606
+A G ++A+ LF+ M+ Q IKP+++ FVG L ACSH GLV+QG +F SM GV
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 607 PQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAER 666
P HY CMVDLLGR G L EAL+LIK+M VEP+ +WG+LL AC+ H N +IA AAE
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478
Query: 667 ITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSS-SIEVNGKVHEFT 725
+ EL+P+ G ++LLSN+YASAG W V RVR +KE+G++K P S ++ NG++H+F
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 538
Query: 726 SGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFG 785
G+ +HP N I L E+ RL GY PDL++V DV + K+ +L H+EKLA+AF
Sbjct: 539 PGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFS 598
Query: 786 LISTSKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
L++T++ I ++KNLR+C DCH F +L S+V + II+RDN RFH FR G CSC DFW
Sbjct: 599 LLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 193/405 (47%), Gaps = 41/405 (10%)
Query: 33 SPSIGSLKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDY 92
S I L +C LN++KQ H H+L++GL ++K++ T ++G YA++ +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYARRVIEP 108
Query: 93 YIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSS 152
N F++ ++IRGY+ G EAI++Y + I P FTF +L AC
Sbjct: 109 VQFRNP-----FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMK 163
Query: 153 AFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLIC 212
G Q H ++ V+V N +I+ Y +C I R+VFDEM ER+V+SWT LI
Sbjct: 164 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIA 223
Query: 213 ACAR----------------RDL---------------PKEAVYLFFEMVEEGIKPNSVT 241
A AR +D+ P+EA+ F M + GI+ + VT
Sbjct: 224 AYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 283
Query: 242 MVCVISACAKLQNLELGDRVCAYIDELGMKANALMV--NALVDMYMKCGAVDTAKQLFGE 299
+ ISACA+L + DR + G + +V +AL+DMY KCG V+ A +F
Sbjct: 284 VAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMS 343
Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGP-RPDRVTMLSAVSASAQLGDLLC 358
++N+ ++++ G A+EAL + M+ +P+ VT + A+ A + G +
Sbjct: 344 MNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQ 403
Query: 359 GRMCHGYVLRN-GLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
GR + + G++ M+D+ + G+ + A + MS
Sbjct: 404 GRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/752 (32%), Positives = 402/752 (53%), Gaps = 38/752 (5%)
Query: 96 DNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFG 155
D A F++N +I+G++ GL +EA+ Y + G+ D FT+PFV+ + S+
Sbjct: 88 DEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLE 147
Query: 156 EGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
EG ++H ++K+GF DV+V N LI+ Y + G D +VF+EM ER++VSW S+I
Sbjct: 148 EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYL 207
Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV-CAYIDELGMKANA 274
++ LF EM++ G KP+ + + + AC+ + + ++G + C + +
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 275 LMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEML-L 333
+++ +++DMY K G V A+++F RN+V N ++ Y R G +A +M
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
+G +PD +T ++ + ASA +L GR HGY +R G + +IDMY +CG+
Sbjct: 328 NGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ--- 380
Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
++SA +F M ++ ISWN+++ Q
Sbjct: 381 ----------------------------LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKN 412
Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
A+ELF+ + + D T+ + A +L + I+AYI K+ + + +L
Sbjct: 413 YSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSL 472
Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
V M+A CGD + A + F + +DV +W + I A A+ G G +V LF+EM+ + P+
Sbjct: 473 VHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
F +L ACS G+V++GW F SM +G+ P I HYGCM+DL+GR G A ++
Sbjct: 533 STFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
MP P IWGSLL A + H+++ IA +AAE+I +++ + +G +VLL N+YA AG+W +
Sbjct: 593 EMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAG- 752
V R++L M+ +GI + S++E GK H FT+GD SH N I +L ++ + +
Sbjct: 653 VNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDI 712
Query: 753 YVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAK 812
YV ++ + + + + HS +LA FGLIST + V N R+C CH F +
Sbjct: 713 YVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLE 772
Query: 813 LVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
S++ REI+V D+ FH F G CSC ++W
Sbjct: 773 KASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 236/496 (47%), Gaps = 41/496 (8%)
Query: 191 DGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACA 250
D ++FDEM++ + W +I L EAV + MV G+K ++ T VI + A
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 251 KLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNT 310
+ +LE G ++ A + +LG ++ + N+L+ +YMK G A+++F E +R++V N+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 311 IMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNG 370
++S Y+ LG +L + EML G +PDR + +SA+ A + + G+ H + +R+
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 371 LEGWDS-ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVF 429
+E D + +++DMY K G+ A RIF+ M + +V+WN +I +NG V A F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 430 SEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALD 489
+M +++N + D +T + + A L
Sbjct: 322 QKM---------------SEQNGLQP---------------DVITSINLLPASAILE--- 348
Query: 490 LAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMA 549
+ I+ Y + G M L TAL+DM+ CG + A +F RM +++V +W + I A
Sbjct: 349 -GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 550 MEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQI 609
G A+ELF E+ + PDS +L A + +++G + + S I
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 610 VHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAACQKH--QNVDIAAYAAER 666
+ +V + G L +A + ++ DV+ W S++ A H + + ++
Sbjct: 468 I-LNSLVHMYAMCGDLEDARKCFNHILLK--DVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 667 ITELDPEKSGVHVLLS 682
+ ++P KS LL+
Sbjct: 525 ASRVNPNKSTFASLLA 540
Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 189/396 (47%), Gaps = 22/396 (5%)
Query: 49 KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMYNS 108
K+ HCH ++ + + + + + ++YA++ F+ I+ N + +N
Sbjct: 251 KEIHCHAVRSRI--ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN-----IVAWNV 303
Query: 109 LIRGYSCIGLGVEAISLYVELA-GFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKM 167
+I Y+ G +A + +++ G+ PD T +L A SA EG +HG ++
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRR 359
Query: 168 GFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLF 227
GF + +E LI+ YGECG + +FD M+E+NV+SW S+I A + A+ LF
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 419
Query: 228 FEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKC 287
E+ + + P+S T+ ++ A A+ +L G + AYI + +N +++N+LV MY C
Sbjct: 420 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMC 479
Query: 288 GAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAV 347
G ++ A++ F +++V N+I+ Y G R ++ + EM+ P++ T S +
Sbjct: 480 GDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLL 539
Query: 348 SASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMS 402
+A + G + G M Y + G+E + M+D+ + G A R + M
Sbjct: 540 AACSISGMVDEGWEYFESMKREYGIDPGIEHY----GCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 403 N-KTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDH 437
T W SL+ + D+ A ++ +H
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEH 631
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 168/364 (46%), Gaps = 41/364 (11%)
Query: 290 VDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSA 349
++ A QLF E + L N ++ + GL EA+ M+ G + D T + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 350 SAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSW 409
A + L G+ H V++ G +CN++I +YMK G A ++F+ M + +VSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 410 NSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIK 469
NS+I+G + GD G + ++ LF+ ML K
Sbjct: 200 NSMISGYLALGD------------------------GFS-------SLMLFKEMLKCGFK 228
Query: 470 VDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHC-DMQLATALVDMFARCGDPQRAMQ 528
DR + + AC ++ + + K I+ + ++ I D+ + T+++DM+++ G+ A +
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 529 VFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQ-GIKPDSIVFVGVLTACS-HG 586
+F M +R++ AW IG A G A F +M Q G++PD I + +L A +
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 587 GLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGS 646
G G+ + R G P +V ++D+ G G L A ++I E N + W S
Sbjct: 349 GRTIHGYAMRR------GFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNS 401
Query: 647 LLAA 650
++AA
Sbjct: 402 IIAA 405
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 422 VESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASA 481
+E A ++F EM D WN M+ G T ++ EA++ + M+ +K D T V +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 482 CGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAW 541
+ +L+ K I+A + K G D+ + +L+ ++ + G A +VF M +RD+ +W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 542 TAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTD 601
+ I G+G ++ LF EML+ G KPD + L ACSH G +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI-----H 254
Query: 602 IHGVSPQIVHYGCMV-----DLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQN 656
H V +I MV D+ + G + A + M ++ N V W ++ ++
Sbjct: 255 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNGR 313
Query: 657 VDIAAYAAERITELDPEKSGVHVLLSNIYASA 688
V A ++++E + + V ++ + ASA
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/631 (37%), Positives = 362/631 (57%), Gaps = 37/631 (5%)
Query: 214 CARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKAN 273
C +RDLP+ A+ + G+ +S T +I C + + G+ +C ++ G +
Sbjct: 37 CYQRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 274 ALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLL 333
+VN L++MY+K ++ A QLF + RN++ T++S Y + + ++AL +L ML
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 334 HGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEM 393
RP+ T S + + + D+ RM H +++ GLE + + +ID++ K G+ E
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE- 211
Query: 394 ACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMF 453
A VF EM D I WN+++GG Q +
Sbjct: 212 ------------------------------DALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 454 EEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKNGIHCDMQLATAL 513
+ A+ELF+ M ++ T+ V AC L L+L + +I K D+ L AL
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNAL 299
Query: 514 VDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDS 573
VDM+ +CG + A++VF +M++RDV W+ I +A G ++A++LF M G KP+
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 574 IVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIK 633
I VGVL ACSH GL+ GW+ FRSM ++G+ P HYGCM+DLLG+AG L +A+ L+
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 634 SMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVLLSNIYASAGKWTN 693
M EP+ V W +LL AC+ +N+ +A YAA+++ LDPE +G + LLSNIYA++ KW +
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 694 VARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGY 753
V +R +M+++GI+K PG S IEVN ++H F GD SHP++ +S L ++ RL GY
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Query: 754 VPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVKNLRLCCDCHSFAKL 813
VP+ VL D++ ++ + L HHSEKLA+AFGL++ IR+ KNLR+C DCH F KL
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599
Query: 814 VSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
SK+ R I++RD R+H F+ G CSC D+W
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 208/430 (48%), Gaps = 44/430 (10%)
Query: 129 LAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGD 188
L G+ D T+ ++ C + A EG + + G +F+ N LIN Y +
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 189 IVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISA 248
+ D ++FD+M +RNV+SWT++I A ++ + ++A+ L M+ + ++PN T V+ +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 249 CAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLC 308
C + ++ + C I E G++++ + +AL+D++ K G + A +F E + ++
Sbjct: 172 CNGMSDVRMLH--CGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 309 NTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLR 368
N+I+ + + + AL + M G ++ T+ S + A L L G H ++++
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 369 NGLEGWDS---ICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESA 425
+D + N ++DMY KCG E A R+F+ M + V++W+++I+GL +NG
Sbjct: 289 -----YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG----- 338
Query: 426 REVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYL 485
+EA++LF M S K + +T+VGV AC +
Sbjct: 339 --------------------------YSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372
Query: 486 GALDLAKWIYAYIEK-NGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTA 543
G L+ + + ++K GI + ++D+ + G A+++ ME + D W
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 544 AIGAMAMEGN 553
+GA ++ N
Sbjct: 433 LLGACRVQRN 442
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 171/342 (50%), Gaps = 20/342 (5%)
Query: 80 FESLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKF 139
F L A + FD + N S T ++I YS + +A+ L V + + P+ +
Sbjct: 109 FNLLNDAHQLFDQMPQRNVISWT-----TMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 140 TFPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEM 199
T+ VL +C + + +H I+K G + DVFV + LI+ + + G+ D VFDEM
Sbjct: 164 TYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 200 SERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGD 259
+ + W S+I A+ A+ LF M G T+ V+ AC L LELG
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG- 279
Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
+ A++ + + ++ NALVDMY KCG+++ A ++F + K+R+++ +T++S + G
Sbjct: 280 -MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRN--GLEGWDSI 377
++EAL + + M G +P+ +T++ + A + G L G Y R+ L G D +
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG----WYYFRSMKKLYGIDPV 394
Query: 378 ---CNTMIDMYMKCGKQEMACRIFDHMS-NKTVVSWNSLIAG 415
MID+ K GK + A ++ + M V+W +L+
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 135/262 (51%), Gaps = 11/262 (4%)
Query: 39 LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
L++C +++++ HC I+K+GL S V A + F L + A + D
Sbjct: 169 LRSCNGMSDVRMLHCGIIKEGLE------SDVFVRSALIDVFAKLGEPEDALSVF--DEM 220
Query: 99 TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGV 158
+ ++NS+I G++ A+ L+ + G + ++ T VL ACT + G+
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
Q H IVK +D+D+ + N L++ Y +CG + D RVF++M ER+V++W+++I A+
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDEL-GMKANALMV 277
+EA+ LF M G KPN +T+V V+ AC+ LE G + +L G+
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 278 NALVDMYMKCGAVDTAKQLFGE 299
++D+ K G +D A +L E
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNE 420
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/728 (33%), Positives = 386/728 (53%), Gaps = 45/728 (6%)
Query: 121 EAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGFDR-DVFVENCL 179
EA E+ G+ +++ + AC + + G +H + +MG + V ++NC+
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCV 124
Query: 180 INFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNS 239
+ Y EC + D ++FDEMSE N VS T++I A A + + +AV LF M+ G KP S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 240 VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGE 299
++ + + L+ G ++ A++ G+ +N + +V+MY+KCG + AK++F +
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 300 CKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCG 359
+ V C +M Y + G AR+AL + +++ G D + A A L +L G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 360 RMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKN 419
+ H V + GLE S+ ++D Y+KC E ACR
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACR----------------------- 341
Query: 420 GDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKV-DRVTMVGV 478
F E+ + +SW+ ++ G Q + FEEA++ F+ + S+ + + T +
Sbjct: 342 --------AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Query: 479 ASACGYLGALDLAKWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDV 538
AC L ++ ++A K + +AL+ M+++CG A +VF M+ D+
Sbjct: 394 FQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDI 453
Query: 539 SAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRS 598
AWTA I A GN +A+ LF +M+ G+KP+S+ F+ VLTACSH GLV QG H +
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDT 513
Query: 599 MTDIHGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVD 658
M + V+P I HY CM+D+ R+GLL EAL +K+MP EP+ + W L+ C H+N++
Sbjct: 514 MLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLE 573
Query: 659 IAAYAAERITELDPEKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVN 718
+ A E + +LDPE + +VL N+Y AGKW A + M E+ ++K S I+
Sbjct: 574 LGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEK 633
Query: 719 GKVHEFTSGDESHPEMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSE 778
GK+H F GD+ HP+ I L+E + + + ++T E++ L HSE
Sbjct: 634 GKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMT---------ERREQLLDHSE 684
Query: 779 KLAMAFGLIST--SKTMPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQG 836
+LA+AFGLIS + PI+V KNLR C DCH FAK VS V EI++RD+ RFH F++G
Sbjct: 685 RLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEG 744
Query: 837 SCSCSDFW 844
CSC+D+W
Sbjct: 745 KCSCNDYW 752
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 226/499 (45%), Gaps = 40/499 (8%)
Query: 82 SLTYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTF 141
SL A K FD + N S T ++I Y+ G+ +A+ L+ + G P +
Sbjct: 133 SLEDADKLFDEMSELNAVSRT-----TMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY 187
Query: 142 PFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSE 201
+L + A G Q+H +++ G + +E ++N Y +CG +V +RVFD+M+
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAV 247
Query: 202 RNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRV 261
+ V+ T L+ + ++A+ LF ++V EG++ +S V+ ACA L+ L LG ++
Sbjct: 248 KKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQI 307
Query: 262 CAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLA 321
A + +LG+++ + LVD Y+KC + ++A + F E ++ N V + I+S Y ++
Sbjct: 308 HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 367
Query: 322 REALAILDEMLLHGPRP-DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNT 380
EA+ + + T S A + L D G H ++ L G +
Sbjct: 368 EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 427
Query: 381 MIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISW 440
+I MY KCG + A +F+ M N +V+W + I+G G+
Sbjct: 428 LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA------------------ 469
Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKW-IYAYIE 499
EA+ LF M+S +K + VT + V +AC + G ++ K + +
Sbjct: 470 -------------SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLR 516
Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAV 558
K + + ++D++AR G A++ + M + D +W + N E
Sbjct: 517 KYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELG- 575
Query: 559 ELFNEMLRQGIKPDSIVFV 577
E+ E LRQ D+ +V
Sbjct: 576 EIAGEELRQLDPEDTAGYV 594
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 19/263 (7%)
Query: 39 LKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIK 95
LK C +L EL KQ H + K GL + S + +V + +FES A +AF +
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES---ACRAFQEIRE 348
Query: 96 DNETSATLFMYNSLIRGYSCIGLGVEAISLYVEL-AGFGILPDKFTFPFVLNACTKSSAF 154
N+ S ++++I GY + EA+ + L + + + FT+ + AC+ +
Sbjct: 349 PNDVS-----WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 155 GEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICAC 214
G QVH +K + E+ LI Y +CG + D VF+ M ++V+WT+ I
Sbjct: 404 NIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGH 463
Query: 215 ARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANA 274
A EA+ LF +MV G+KPNSVT + V++AC+ +E G +D + K N
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHC---LDTMLRKYNV 520
Query: 275 LMV----NALVDMYMKCGAVDTA 293
+ ++D+Y + G +D A
Sbjct: 521 APTIDHYDCMIDIYARSGLLDEA 543
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%)
Query: 441 NTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEK 500
N L L++ EA E + M + V + + AC L +L + ++ +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 501 NGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVEL 560
+ + L ++ M+ C + A ++F M + + + T I A A +G ++AV L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 561 FNEMLRQGIKPDSIVFVGVLTA 582
F+ ML G KP S ++ +L +
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKS 193
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/587 (39%), Positives = 333/587 (56%), Gaps = 33/587 (5%)
Query: 260 RVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLG 319
++ A + G ++ L++ + G + A+Q+F E + L NT+ YVR
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 320 LAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICN 379
L E+L + +M G RPD T V A +QLGD CG H +V++ G +
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
++ MYMK G ++ SA +F M +D ++
Sbjct: 149 ELVMMYMKFG-------------------------------ELSSAEFLFESMQVKDLVA 177
Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
WN L Q A+E F M ++ ++ D T+V + SACG LG+L++ + IY
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237
Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
K I C++ + A +DM +CG+ + A +F M++R+V +W+ I AM G+ +A+
Sbjct: 238 KEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALT 297
Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSM--TDIHGVSPQIVHYGCMVD 617
LF M +G++P+ + F+GVL+ACSH GLVN+G F M ++ + P+ HY CMVD
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVD 357
Query: 618 LLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGV 677
LLGR+GLL EA + IK MPVEP+ IWG+LL AC H+++ + A+ + E P+
Sbjct: 358 LLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY 417
Query: 678 HVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNI 737
HVLLSNIYA+AGKW V +VR +M++ G +K+ SS+E GK+H F GD+SHP+ I
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAI 477
Query: 738 SSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRV 797
L E+ ++R GYVPD +V DV+ +EK+ LSHHSEKLA+AFGLI PIRV
Sbjct: 478 YEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRV 537
Query: 798 VKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
+KNLR C DCH+F+K VS + EII+RD NRFH FR G CSC +FW
Sbjct: 538 MKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 166 bits (421), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 206/424 (48%), Gaps = 39/424 (9%)
Query: 26 AKTTPKDSPSIGSL--KNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
AK TP + L + +LK+ H +L+ G K S +++++ +G +
Sbjct: 3 AKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIG---DM 59
Query: 84 TYAQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPF 143
YA++ FD K +F++N+L +GY L E++ LY ++ G+ PD+FT+PF
Sbjct: 60 CYARQVFDEMHKPR-----IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPF 114
Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
V+ A ++ F G +H +VK GF V L+ Y + G++ +F+ M ++
Sbjct: 115 VVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 174
Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
+V+W + + C + A+ F +M + ++ +S T+V ++SAC +L +LE+G+ +
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 234
Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
+ + N ++ NA +DM++KCG + A+ LF E K RN+V +T++ Y G +RE
Sbjct: 235 RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSRE 294
Query: 324 ALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMID 383
AL + M G RP+ VT L +SA + G L N + + S+ D
Sbjct: 295 ALTLFTTMQNEGLRPNYVTFLGVLSACSHAG------------LVNEGKRYFSLMVQSND 342
Query: 384 MYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGR-DHISWNT 442
++ K+ AC ++ L ++G +E A E +MP D W
Sbjct: 343 KNLEPRKEHYAC----------------MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 443 MLGG 446
+LG
Sbjct: 387 LLGA 390
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 37/397 (9%)
Query: 159 QVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRD 218
++H +++ GF + L+ GD+ R+VFDEM + + W +L R
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 219 LPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVN 278
LP E++ L+ +M + G++P+ T V+ A ++L + G + A++ + G ++
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 279 ALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRP 338
LV MYMK G + +A+ LF + ++LV N ++ V+ G + AL ++M +
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 339 DRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIF 398
D T++S +SA QLG L G + + ++ + N +DM++KCG E A +F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 399 DHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAME 458
+ M + VVSW+++I G NGD EA+
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDS-------------------------------REALT 297
Query: 459 LFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYI----EKNGIHCDMQLATALV 514
LF M +E ++ + VT +GV SAC + G ++ K ++ + +KN + + +V
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKN-LEPRKEHYACMV 356
Query: 515 DMFARCGDPQRAMQVFRRME-KRDVSAWTAAIGAMAM 550
D+ R G + A + ++M + D W A +GA A+
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAV 393
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 20/178 (11%)
Query: 492 KWIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAME 551
K I+A + + G L T L++ GD A QVF M K + W
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 552 GNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVH 611
+++ L+ +M G++PD + V+ A S G + G+ L +V
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFAL----------HAHVVK 137
Query: 612 YGC---------MVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIA 660
YG +V + + G L A L +SM V+ + V W + LA C + N IA
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIA 194
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/585 (40%), Positives = 333/585 (56%), Gaps = 43/585 (7%)
Query: 303 RNLVLC---------NTIMSNYVRLGLAREALAILDEMLLHG-PRPDRVTMLSAVSASAQ 352
R L+LC NT++ Y ++A+ EM+ G PD + + A
Sbjct: 59 RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 118
Query: 353 LGDLLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSL 412
L G H L++GLE + T+I MY CG E A ++FD M +V+WN++
Sbjct: 119 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 413 I-------------------------------AGLIKNGDVESAREVFSEMPGRDHISWN 441
I AG IK G++ESA+ +FSEMP RD +SW+
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 238
Query: 442 TMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIEKN 501
TM+ G+ F E+ FR + + + V++ GV SAC G+ + K ++ ++EK
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 502 GIHCDMQLATALVDMFARCGDPQRAMQVFRRM-EKRDVSAWTAAIGAMAMEGNGEQAVEL 560
G + + AL+DM++RCG+ A VF M EKR + +WT+ I +AM G GE+AV L
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358
Query: 561 FNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLLG 620
FNEM G+ PD I F+ +L ACSH GL+ +G F M ++ + P+I HYGCMVDL G
Sbjct: 359 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 418
Query: 621 RAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHVL 680
R+G L +A D I MP+ P ++W +LL AC H N+++A +R+ ELDP SG VL
Sbjct: 419 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 478
Query: 681 LSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISSM 740
LSN YA+AGKW +VA +R M Q I+K S +EV +++FT+G++
Sbjct: 479 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEK 538
Query: 741 LREMNCRLRD-AGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKTMPIRVVK 799
L+E+ RL+D AGY P++ + L DV+E+EK+ +S HSEKLA+AF L SK IR+VK
Sbjct: 539 LKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVK 598
Query: 800 NLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
NLR+C DCH+ KL SKVY EI+VRD NRFH F+ GSCSC D+W
Sbjct: 599 NLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 202/460 (43%), Gaps = 80/460 (17%)
Query: 39 LKNCKTLNELKQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNE 98
L +CK L L Q H +K G+ + K++ CA + ++L YA++ + + +
Sbjct: 12 LNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCA-ISISDALPYARRLLLCFPEPDA 70
Query: 99 TSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFG-ILPDKFTFPFVLNACTKSSAFGEG 157
FM+N+L+RGYS +++++VE+ G + PD F+F FV+ A + G
Sbjct: 71 -----FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 158 VQVHGAIVKMG----------------------FDRDVFVE------------------- 176
Q+H +K G F R VF E
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 177 ---------------------NCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACA 215
N ++ Y + G++ +R+F EM R+ VSW+++I A
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 216 RRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANAL 275
E+ F E+ G+ PN V++ V+SAC++ + E G + ++++ G
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 276 MVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLH 334
+ NAL+DMY +CG V A+ +F G + R +V ++++ G EA+ + +EM +
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 335 GPRPDRVTMLSAVSASAQLGDLLCG-----RMCHGYVLRNGLEGWDSICNTMIDMYMKCG 389
G PD ++ +S + A + G + G M Y + +E + M+D+Y + G
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY----GCMVDLYGRSG 421
Query: 390 KQEMACRIFDHMS-NKTVVSWNSLIAGLIKNGDVESAREV 428
K + A M T + W +L+ +G++E A +V
Sbjct: 422 KLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQV 461
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 253/772 (32%), Positives = 398/772 (51%), Gaps = 83/772 (10%)
Query: 115 CIGLGVEAISLYVELAGFGIL-----PDKFTFPFVLNACT--KSSAFGEGVQVHGAIVKM 167
CIGLG S YV++ I+ P+ F + +++A KSS + V
Sbjct: 13 CIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV--------- 63
Query: 168 GFDR----DVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEA 223
FDR ++F N L+ Y + G I + F+++ +R+ V+W LI + L A
Sbjct: 64 -FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 122
Query: 224 VYLFFEMVEE-GIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVD 282
V + M+ + VT++ ++ + ++ LG ++ + +LG ++ L+ + L+
Sbjct: 123 VKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182
Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYV-------------------------- 316
MY G + AK++F DRN V+ N++M +
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMI 242
Query: 317 ----RLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLE 372
+ GLA+EA+ EM + G + D+ S + A LG + G+ H ++R +
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 373 GWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEM 432
+ + +IDMY KC A +FD M K VV
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV------------------------- 337
Query: 433 PGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAK 492
SW M+ G Q EEA+++F M I D T+ SAC + +L+
Sbjct: 338 ------SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 493 WIYAYIEKNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEG 552
+ +G+ + ++ +LV ++ +CGD + ++F M RD +WTA + A A G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 553 NGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHY 612
+ ++LF++M++ G+KPD + GV++ACS GLV +G F+ MT +G+ P I HY
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 613 GCMVDLLGRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDP 672
CM+DL R+G L EA+ I MP P+ + W +LL+AC+ N++I +AAE + ELDP
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 673 EKSGVHVLLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHP 732
+ LLS+IYAS GKW +VA++R M+E+ ++K PG S I+ GK+H F++ DES P
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631
Query: 733 EMNNISSMLREMNCRLRDAGYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLISTSKT 792
++ I + L E+N ++ D GY PD + V DV+E K +L++HSE+LA+AFGLI
Sbjct: 632 YLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSG 691
Query: 793 MPIRVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
PIRV KNLR+C DCH+ K +S V REI+VRD RFH F+ G+CSC DFW
Sbjct: 692 QPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 189/373 (50%), Gaps = 13/373 (3%)
Query: 106 YNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIV 165
+ ++I+G + GL EAI + E+ G+ D++ F VL AC A EG Q+H I+
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 166 KMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVY 225
+ F ++V + LI+ Y +C + + VFD M ++NVVSWT+++ + +EAV
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 226 LFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYM 285
+F +M GI P+ T+ ISACA + +LE G + G+ + N+LV +Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 286 KCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLS 345
KCG +D + +LF E R+ V ++S Y + G A E + + D+M+ HG +PD VT+
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 346 AVSASAQLGDLLCGR-----MCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
+SA ++ G + G+ M Y + + + + MID++ + G+ E A R +
Sbjct: 478 VISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY----SCMIDLFSRSGRLEEAMRFING 533
Query: 401 MS-NKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRD--HISWNTMLGGL-TQENMFEEA 456
M + W +L++ G++E + + D H + T+L + + ++
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSV 593
Query: 457 MELFRVMLSERIK 469
+L R M + +K
Sbjct: 594 AQLRRGMREKNVK 606
Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 164/325 (50%), Gaps = 24/325 (7%)
Query: 34 PSIGSLKNCKTLNELKQPHCHILKQGLG---HKPSYISKVVCTCAQMGTFESLTYAQKAF 90
P+ G L +NE KQ H I++ + S + + C C + L YA+ F
Sbjct: 278 PACGGLG---AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC------KCLHYAKTVF 328
Query: 91 DYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTK 150
D + N S T +++ GY G EA+ +++++ GI PD +T ++AC
Sbjct: 329 DRMKQKNVVSWT-----AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 151 SSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSL 210
S+ EG Q HG + G V V N L+ YG+CGDI D R+F+EM+ R+ VSWT++
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 211 ICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCAYI-DELG 269
+ A A+ E + LF +MV+ G+KP+ VT+ VISAC++ +E G R + E G
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 270 MKANALMVNALVDMYMKCGAVDTAKQLF-GECKDRNLVLCNTIMS---NYVRLGLAREAL 325
+ + + ++D++ + G ++ A + G + + T++S N L + + A
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563
Query: 326 AILDEMLLHGPRPDRVTMLSAVSAS 350
L E+ H P T+LS++ AS
Sbjct: 564 ESLIELDPH--HPAGYTLLSSIYAS 586
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/709 (33%), Positives = 377/709 (53%), Gaps = 39/709 (5%)
Query: 144 VLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERN 203
+L CT+ +G QVH ++K G ++ N LI+ Y +C + + +VFD M ERN
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 204 VVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDRVCA 263
VVSW++L+ K ++ LF EM +GI PN T + AC L LE G ++
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 264 YIDELGMKANALMVNALVDMYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLARE 323
+ ++G + + N+LVDMY KCG ++ A+++F DR+L+ N +++ +V G +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 324 ALAILDEMLLHG--PRPDRVTMLSAVSASAQLGDLLCGRMCHGYVLRNGLEGWDS--ICN 379
AL M RPD T+ S + A + G + G+ HG+++R+G S I
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 380 TMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHIS 439
+++D+Y+KCG +F SAR+ F ++ + IS
Sbjct: 252 SLVDLYVKCG------YLF-------------------------SARKAFDQIKEKTMIS 280
Query: 440 WNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYAYIE 499
W++++ G QE F EAM LF+ + ++D + + L K + A
Sbjct: 281 WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAV 340
Query: 500 KNGIHCDMQLATALVDMFARCGDPQRAMQVFRRMEKRDVSAWTAAIGAMAMEGNGEQAVE 559
K + + ++VDM+ +CG A + F M+ +DV +WT I G G+++V
Sbjct: 341 KLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVR 400
Query: 560 LFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGWHLFRSMTDIHGVSPQIVHYGCMVDLL 619
+F EMLR I+PD + ++ VL+ACSH G++ +G LF + + HG+ P++ HY C+VDLL
Sbjct: 401 IFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLL 460
Query: 620 GRAGLLGEALDLIKSMPVEPNDVIWGSLLAACQKHQNVDIAAYAAERITELDPEKSGVHV 679
GRAG L EA LI +MP++PN IW +LL+ C+ H ++++ + + +D + +V
Sbjct: 461 GRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYV 520
Query: 680 LLSNIYASAGKWTNVARVRLQMKEQGIRKLPGSSSIEVNGKVHEFTSGDESHPEMNNISS 739
++SN+Y AG W R +G++K G S +E+ +VH F SG++SHP I
Sbjct: 521 MMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQE 580
Query: 740 MLREMNCRLRDA-GYVPDLTNVLLDVDEQEKKYLLSHHSEKLAMAFGLIS---TSKTMPI 795
L+E RLR+ GYV L + L D+D++ K+ L HSEKLA+ L + K I
Sbjct: 581 TLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTI 640
Query: 796 RVVKNLRLCCDCHSFAKLVSKVYDREIIVRDNNRFHFFRQGSCSCSDFW 844
RV KNLR+C DCH F K +SK+ +VRD RFH F G CSC D+W
Sbjct: 641 RVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 150/598 (25%), Positives = 272/598 (45%), Gaps = 84/598 (14%)
Query: 50 QPHCHILKQGLGHK---PSYISKVVCTCAQMGTFESLTYAQKAFDYYIKDNETSATLFMY 106
Q HC++LK G G +Y+ + C C + A K FD + N S +
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREP------LMAYKVFDSMPERNVVS-----W 75
Query: 107 NSLIRGYSCIGLGVEAISLYVELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVK 166
++L+ G+ G ++SL+ E+ GI P++FTF L AC +A +G+Q+HG +K
Sbjct: 76 SALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK 135
Query: 167 MGFDRDVFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWTSLICACARRDLPKEAVYL 226
+GF+ V V N L++ Y +CG I + +VF + +R+++SW ++I +A+
Sbjct: 136 IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 195
Query: 227 FFEMVEEGIK--PNSVTMVCVISACAKLQNLELGDRVCAYIDELGMK--ANALMVNALVD 282
F M E IK P+ T+ ++ AC+ + G ++ ++ G ++A + +LVD
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255
Query: 283 MYMKCGAVDTAKQLFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVT 342
+Y+KCG + +A++ F + K++ ++ ++++ Y + G EA+ + + + D
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315
Query: 343 MLSAVSASAQLGDLLCGRMCHGYVLR--NGLEGWDSICNTMIDMYMKCGKQEMACRIFDH 400
+ S + A L G+ ++ +GLE S+ N+++DMY+KCG + A + F
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLE--TSVLNSVVDMYLKCGLVDEAEKCFAE 373
Query: 401 MSNKTVVSWNSLIAGLIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELF 460
M K V+SW +I G K+G + ++++ +F
Sbjct: 374 MQLKDVISWTVVITGYGKHG-------------------------------LGKKSVRIF 402
Query: 461 RVMLSERIKVDRVTMVGVASACGYLGALDLAKWIYA-YIEKNGIHCDMQLATALVDMFAR 519
ML I+ D V + V SAC + G + + +++ +E +GI ++ +VD+ R
Sbjct: 403 YEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR 462
Query: 520 CGDPQRAMQVFRRME-KRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIK-PDSIVFV 577
G + A + M K +V W + + G+ E E+ +LR K P + V +
Sbjct: 463 AGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMM 522
Query: 578 GVLTACSHGGLVNQ-------------------GW-------HLFRSMTDIHGVSPQI 609
L G N+ W H FRS D H ++P I
Sbjct: 523 SNLYG--QAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVI 578
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 197/423 (46%), Gaps = 38/423 (8%)
Query: 237 PNS-VTMVCVISACAKLQNLELGDRVCAYIDELGMKANALMVNALVDMYMKCGAVDTAKQ 295
PN +V ++ C + + G +V Y+ + G N + N L+DMY KC A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 296 LFGECKDRNLVLCNTIMSNYVRLGLAREALAILDEMLLHGPRPDRVTMLSAVSASAQLGD 355
+F +RN+V + +MS +V G + +L++ EM G P+ T + + A L
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 356 LLCGRMCHGYVLRNGLEGWDSICNTMIDMYMKCGKQEMACRIFDHMSNKTVVSWNSLIAG 415
L G HG+ L+ G E + N+++DMY KCG+ A ++F + +++++SWN++IAG
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 416 LIKNGDVESAREVFSEMPGRDHISWNTMLGGLTQENMFEEAMELFRVMLSERIKVDRVTM 475
+ G A + F G+ QE +E + D T+
Sbjct: 183 FVHAGYGSKALDTF----------------GMMQEANIKE-------------RPDEFTL 213
Query: 476 VGVASACGYLGALDLAKWIYAYIEKNGIHC--DMQLATALVDMFARCGDPQRAMQVFRRM 533
+ AC G + K I+ ++ ++G HC + +LVD++ +CG A + F ++
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 534 EKRDVSAWTAAIGAMAMEGNGEQAVELFNEMLRQGIKPDSIVFVGVLTACSHGGLVNQGW 593
+++ + +W++ I A EG +A+ LF + + DS ++ + L+ QG
Sbjct: 274 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 333
Query: 594 HLFRSMTDI-HGVSPQIVHYGCMVDLLGRAGLLGEALDLIKSMPVEPNDVI-WGSLLAAC 651
+ + G+ +++ +VD+ + GL+ EA M ++ DVI W ++
Sbjct: 334 QMQALAVKLPSGLETSVLN--SVVDMYLKCGLVDEAEKCFAEMQLK--DVISWTVVITGY 389
Query: 652 QKH 654
KH
Sbjct: 390 GKH 392
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 16/277 (5%)
Query: 27 KTTPKDSPSIGSLKNCKTLNEL---KQPHCHILKQGLGHKPSYISKVVCTCAQMGTFESL 83
K P + LK C + + KQ H +++ G H PS T + + +
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF-HCPS---SATITGSLVDLYVKC 260
Query: 84 TY---AQKAFDYYIKDNETSATLFMYNSLIRGYSCIGLGVEAISLYVELAGFGILPDKFT 140
Y A+KAFD IK+ T+ ++SLI GY+ G VEA+ L+ L D F
Sbjct: 261 GYLFSARKAFDQ-IKEK----TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315
Query: 141 FPFVLNACTKSSAFGEGVQVHGAIVKMGFDRDVFVENCLINFYGECGDIVDGRRVFDEMS 200
++ + +G Q+ VK+ + V N +++ Y +CG + + + F EM
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQ 375
Query: 201 ERNVVSWTSLICACARRDLPKEAVYLFFEMVEEGIKPNSVTMVCVISACAKLQNLELGDR 260
++V+SWT +I + L K++V +F+EM+ I+P+ V + V+SAC+ ++ G+
Sbjct: 376 LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 435
Query: 261 VCAYIDEL-GMKANALMVNALVDMYMKCGAVDTAKQL 296
+ + + E G+K +VD+ + G + AK L
Sbjct: 436 LFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 304,063,642
Number of Sequences: 539616
Number of extensions: 12539043
Number of successful extensions: 40928
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 30305
Number of HSP's gapped (non-prelim): 2591
length of query: 844
length of database: 191,569,459
effective HSP length: 126
effective length of query: 718
effective length of database: 123,577,843
effective search space: 88728891274
effective search space used: 88728891274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)