Query 003156
Match_columns 843
No_of_seqs 707 out of 5709
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:19:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003156.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003156hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.3E-57 8E-62 545.8 32.0 430 1-444 246-751 (768)
2 4gt4_A Tyrosine-protein kinase 100.0 3.2E-54 1.1E-58 455.1 24.1 260 556-833 28-305 (308)
3 3omv_A RAF proto-oncogene seri 100.0 4.3E-54 1.5E-58 451.7 22.2 265 555-838 37-304 (307)
4 4asz_A BDNF/NT-3 growth factor 100.0 2.2E-54 7.4E-59 454.4 19.7 269 554-841 13-296 (299)
5 4aoj_A High affinity nerve gro 100.0 1.2E-53 4.1E-58 455.1 23.4 267 554-839 41-324 (329)
6 3rgz_A Protein brassinosteroid 100.0 4.9E-52 1.7E-56 499.5 31.5 423 1-431 199-716 (768)
7 4ase_A Vascular endothelial gr 100.0 4.2E-52 1.4E-56 446.7 18.6 266 553-835 63-348 (353)
8 4b9d_A Serine/threonine-protei 100.0 2.1E-51 7.3E-56 437.1 17.6 253 554-828 24-277 (350)
9 4fih_A Serine/threonine-protei 100.0 1.1E-50 3.8E-55 430.9 22.9 253 552-828 72-324 (346)
10 3hmm_A TGF-beta receptor type- 100.0 5E-51 1.7E-55 432.3 17.1 264 556-835 5-298 (303)
11 3fpq_A Serine/threonine-protei 100.0 1.7E-50 6E-55 421.2 20.9 249 557-828 29-283 (290)
12 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-50 7.3E-55 427.5 21.6 253 554-832 58-314 (336)
13 3t6q_A CD180 antigen; protein- 100.0 7.8E-49 2.7E-53 461.1 35.1 426 2-434 33-562 (606)
14 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.2E-50 7.5E-55 422.0 18.8 251 554-827 32-284 (311)
15 4fie_A Serine/threonine-protei 100.0 1.7E-49 5.7E-54 432.2 24.5 254 551-828 148-401 (423)
16 3hyh_A Carbon catabolite-derep 100.0 1.5E-49 5.1E-54 410.3 22.5 248 555-828 14-263 (275)
17 3j0a_A TOLL-like receptor 5; m 100.0 1.2E-48 4.2E-53 474.8 32.2 418 2-434 24-562 (844)
18 3vq2_A TLR4, TOLL-like recepto 100.0 3E-47 1E-51 447.6 33.5 425 2-436 32-562 (606)
19 3ubd_A Ribosomal protein S6 ki 100.0 6.7E-49 2.3E-53 411.1 14.9 250 554-828 24-282 (304)
20 4g31_A Eukaryotic translation 100.0 1.4E-48 4.7E-53 411.1 16.4 253 555-828 6-280 (299)
21 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-46 7E-51 446.6 35.1 185 250-434 403-624 (680)
22 3t6q_A CD180 antigen; protein- 100.0 5.3E-46 1.8E-50 437.1 37.3 405 1-414 56-565 (606)
23 2z63_A TOLL-like receptor 4, v 100.0 1E-46 3.4E-51 440.1 30.2 417 2-434 28-533 (570)
24 1ziw_A TOLL-like receptor 3; i 100.0 2.8E-45 9.7E-50 436.8 37.8 404 2-410 25-494 (680)
25 4eco_A Uncharacterized protein 100.0 1.7E-46 5.8E-51 441.0 25.4 413 3-435 82-603 (636)
26 3vq2_A TLR4, TOLL-like recepto 100.0 3.7E-45 1.3E-49 429.9 34.3 398 1-414 55-563 (606)
27 4ecn_A Leucine-rich repeat pro 100.0 1.5E-45 5.2E-50 439.2 27.6 393 3-413 324-844 (876)
28 3j0a_A TOLL-like receptor 5; m 100.0 1.3E-44 4.4E-49 439.5 35.6 413 5-432 7-539 (844)
29 2z63_A TOLL-like receptor 4, v 100.0 5.2E-45 1.8E-49 425.6 28.3 403 1-416 51-538 (570)
30 4b99_A Mitogen-activated prote 100.0 9E-46 3.1E-50 404.7 18.8 266 554-828 54-345 (398)
31 4eco_A Uncharacterized protein 100.0 5.1E-45 1.7E-49 428.4 24.8 391 27-431 81-578 (636)
32 4f9c_A Cell division cycle 7-r 100.0 5.7E-45 1.9E-49 394.3 23.0 263 553-828 20-353 (361)
33 2z7x_B TOLL-like receptor 1, v 100.0 9.4E-45 3.2E-49 418.1 22.7 409 5-434 3-483 (520)
34 2z81_A CD282 antigen, TOLL-lik 100.0 4.4E-44 1.5E-48 415.6 23.7 410 7-434 10-512 (549)
35 3v47_A TOLL-like receptor 5B a 100.0 3.5E-43 1.2E-47 398.1 30.2 385 5-417 13-416 (455)
36 3v5w_A G-protein coupled recep 100.0 3.6E-44 1.2E-48 407.1 20.5 252 554-828 189-450 (689)
37 2z7x_B TOLL-like receptor 1, v 100.0 9.1E-44 3.1E-48 409.9 24.3 387 2-414 21-486 (520)
38 3uim_A Brassinosteroid insensi 100.0 7.5E-44 2.6E-48 384.6 21.2 277 553-832 29-309 (326)
39 4ecn_A Leucine-rich repeat pro 100.0 2.3E-43 7.9E-48 420.4 26.6 393 27-433 323-841 (876)
40 2qkw_B Protein kinase; three-h 100.0 3.8E-43 1.3E-47 378.1 23.3 276 553-834 38-315 (321)
41 3uto_A Twitchin; kinase, muscl 100.0 2.6E-43 8.9E-48 404.7 20.4 252 554-828 157-411 (573)
42 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.2E-42 1.1E-46 400.3 29.8 383 4-413 33-514 (562)
43 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-42 4.1E-47 403.5 24.2 394 2-414 26-515 (549)
44 4g8a_A TOLL-like receptor 4; l 100.0 1.4E-41 4.8E-46 402.0 32.8 420 2-434 52-582 (635)
45 2psq_A Fibroblast growth facto 100.0 2.4E-42 8.1E-47 378.5 22.6 264 553-834 80-364 (370)
46 3cbl_A C-FES, proto-oncogene t 100.0 6.6E-43 2.2E-47 384.4 17.5 261 553-834 113-374 (377)
47 3v47_A TOLL-like receptor 5B a 100.0 5.5E-42 1.9E-46 388.2 25.5 367 2-390 30-413 (455)
48 3s95_A LIMK-1, LIM domain kina 100.0 2E-42 6.7E-47 370.7 19.5 262 554-835 10-283 (310)
49 3zgw_A Maternal embryonic leuc 100.0 4.9E-42 1.7E-46 371.0 22.0 255 553-830 9-263 (347)
50 3fxz_A Serine/threonine-protei 100.0 1.2E-41 4.3E-46 361.5 23.6 253 552-828 18-270 (297)
51 2nru_A Interleukin-1 receptor- 100.0 2.6E-41 9E-46 361.4 26.3 270 556-834 33-306 (307)
52 3p86_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46 363.8 21.3 263 552-836 35-300 (309)
53 1luf_A Muscle-specific tyrosin 100.0 6.3E-42 2.1E-46 372.5 19.2 269 553-839 46-340 (343)
54 3fe3_A MAP/microtubule affinit 100.0 1.7E-41 5.7E-46 364.8 22.2 250 554-828 15-265 (328)
55 3l9p_A Anaplastic lymphoma kin 100.0 5.4E-42 1.9E-46 375.4 18.7 267 550-834 67-345 (367)
56 3vhe_A Vascular endothelial gr 100.0 4.8E-42 1.6E-46 375.9 18.2 267 552-835 20-356 (359)
57 3tki_A Serine/threonine-protei 100.0 6.7E-42 2.3E-46 367.9 18.8 257 554-829 7-263 (323)
58 3kul_A Ephrin type-A receptor 100.0 1.1E-41 3.6E-46 366.9 20.4 262 553-835 48-314 (325)
59 3lb7_A RAF proto-oncogene seri 100.0 3.1E-41 1.1E-45 360.1 23.1 266 554-838 36-304 (307)
60 3poz_A Epidermal growth factor 100.0 1.5E-41 5E-46 366.4 20.0 261 552-834 13-278 (327)
61 1rjb_A FL cytokine receptor; k 100.0 3.3E-41 1.1E-45 366.9 21.9 271 552-839 43-339 (344)
62 3soc_A Activin receptor type-2 100.0 8.7E-42 3E-46 367.3 16.8 267 554-834 24-318 (322)
63 4eqm_A Protein kinase; transfe 100.0 4.2E-41 1.4E-45 357.0 21.3 266 553-837 10-278 (294)
64 4euu_A Serine/threonine-protei 100.0 2.2E-40 7.5E-45 356.2 27.0 273 554-834 9-309 (319)
65 3tt0_A Basic fibroblast growth 100.0 5.2E-41 1.8E-45 370.1 21.9 266 552-835 67-353 (382)
66 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.7E-41 2.6E-45 350.3 22.1 258 553-835 7-265 (268)
67 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.5E-41 1.9E-45 361.3 21.2 250 554-829 9-260 (336)
68 3ugc_A Tyrosine-protein kinase 100.0 2.8E-41 9.5E-46 359.0 18.6 269 553-837 9-294 (295)
69 4hcu_A Tyrosine-protein kinase 100.0 5E-41 1.7E-45 351.9 20.3 256 554-834 10-266 (269)
70 2qol_A Ephrin receptor; recept 100.0 2.5E-41 8.6E-46 370.6 18.3 259 554-833 45-308 (373)
71 2ivs_A Proto-oncogene tyrosine 100.0 4.2E-41 1.5E-45 361.1 19.4 264 553-834 22-311 (314)
72 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.5E-40 3.2E-44 379.5 31.7 391 25-434 29-512 (562)
73 2yab_A Death-associated protei 100.0 1.2E-40 4E-45 362.5 22.4 255 552-828 10-273 (361)
74 1o6l_A RAC-beta serine/threoni 100.0 1.3E-40 4.3E-45 359.0 22.4 250 554-828 5-261 (337)
75 3kex_A Receptor tyrosine-prote 100.0 3.3E-41 1.1E-45 363.4 17.7 260 553-834 12-276 (325)
76 1qcf_A Haematopoetic cell kina 100.0 7E-41 2.4E-45 377.4 20.8 262 552-838 186-448 (454)
77 2c30_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 354.1 25.4 258 553-834 44-301 (321)
78 1opk_A P150, C-ABL, proto-onco 100.0 8E-41 2.7E-45 380.4 21.1 260 553-835 219-479 (495)
79 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-40 4.2E-45 357.4 21.4 268 552-836 21-309 (313)
80 4e5w_A Tyrosine-protein kinase 100.0 2.3E-40 7.9E-45 353.3 23.2 266 553-833 20-301 (302)
81 3o0g_A Cell division protein k 100.0 2.3E-40 7.9E-45 351.3 23.0 264 556-828 4-283 (292)
82 4f0f_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 348.4 25.0 256 553-832 18-287 (287)
83 2y0a_A Death-associated protei 100.0 2.4E-40 8.2E-45 356.5 22.6 254 552-828 9-272 (326)
84 3c0i_A Peripheral plasma membr 100.0 2.9E-40 9.8E-45 359.6 23.3 259 552-828 22-287 (351)
85 3q4u_A Activin receptor type-1 100.0 1.9E-40 6.6E-45 353.7 21.5 261 553-832 7-300 (301)
86 2pmi_A Negative RE, cyclin-dep 100.0 2.1E-40 7.3E-45 355.7 22.0 268 554-828 5-294 (317)
87 1k9a_A Carboxyl-terminal SRC k 100.0 2.8E-40 9.6E-45 371.8 23.4 252 554-835 193-446 (450)
88 2pvf_A Fibroblast growth facto 100.0 2.5E-40 8.6E-45 358.1 22.2 264 553-834 34-318 (334)
89 1mp8_A Focal adhesion kinase 1 100.0 1.1E-40 3.7E-45 351.7 18.6 259 552-833 13-275 (281)
90 3is5_A Calcium-dependent prote 100.0 3.1E-40 1.1E-44 348.9 21.9 258 551-828 19-279 (285)
91 2w4o_A Calcium/calmodulin-depe 100.0 3.2E-40 1.1E-44 358.8 22.5 253 552-828 51-306 (349)
92 1tki_A Titin; serine kinase, m 100.0 1.7E-40 5.7E-45 356.5 19.8 253 554-829 5-259 (321)
93 4fr4_A YANK1, serine/threonine 100.0 4.6E-40 1.6E-44 359.7 23.4 252 554-827 15-271 (384)
94 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.1E-40 7.1E-45 373.1 21.0 262 552-838 182-444 (452)
95 1p4o_A Insulin-like growth fac 100.0 1.9E-40 6.5E-45 357.4 19.7 267 552-836 23-301 (322)
96 1csn_A Casein kinase-1; phosph 100.0 7.5E-40 2.6E-44 348.6 24.1 263 554-835 10-284 (298)
97 3niz_A Rhodanese family protei 100.0 3.7E-40 1.3E-44 352.6 21.8 263 554-828 21-301 (311)
98 4dc2_A Protein kinase C IOTA t 100.0 4E-40 1.4E-44 361.3 22.6 256 554-828 52-319 (396)
99 3lzb_A Epidermal growth factor 100.0 1.9E-40 6.5E-45 357.5 19.6 260 553-834 14-278 (327)
100 3qup_A Tyrosine-protein kinase 100.0 1.7E-40 5.8E-45 357.9 19.0 265 552-834 21-298 (323)
101 4g8a_A TOLL-like receptor 4; l 100.0 5.5E-39 1.9E-43 379.7 33.8 399 1-413 75-584 (635)
102 3gen_A Tyrosine-protein kinase 100.0 3.3E-40 1.1E-44 348.5 20.4 257 553-834 23-280 (283)
103 2yex_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 346.6 20.9 256 554-828 7-262 (276)
104 2izr_A Casein kinase I isoform 100.0 8.3E-40 2.8E-44 353.4 23.2 260 554-833 9-280 (330)
105 2buj_A Serine/threonine-protei 100.0 2.5E-40 8.5E-45 355.6 18.6 271 553-839 28-311 (317)
106 3og7_A AKAP9-BRAF fusion prote 100.0 3E-40 1E-44 349.9 18.9 263 553-834 23-288 (289)
107 2xir_A Vascular endothelial gr 100.0 3.7E-40 1.3E-44 354.1 19.9 266 553-835 26-311 (316)
108 2zv2_A Calcium/calmodulin-depe 100.0 6.7E-40 2.3E-44 348.8 21.7 252 554-828 13-293 (298)
109 3soa_A Calcium/calmodulin-depe 100.0 9.2E-40 3.2E-44 364.8 23.6 255 553-828 10-268 (444)
110 3uc3_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44 358.4 21.2 256 553-829 19-276 (361)
111 2i1m_A Macrophage colony-stimu 100.0 2E-40 6.8E-45 359.0 17.6 265 553-834 45-326 (333)
112 2bdw_A Hypothetical protein K1 100.0 8.1E-40 2.8E-44 357.0 22.5 255 552-828 27-285 (362)
113 2eva_A TAK1 kinase - TAB1 chim 100.0 8.4E-40 2.9E-44 349.3 21.9 257 554-836 8-265 (307)
114 3dtc_A Mitogen-activated prote 100.0 5.3E-40 1.8E-44 344.5 19.9 253 555-832 8-271 (271)
115 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.9E-40 1E-44 358.5 18.4 249 555-828 24-281 (353)
116 3c1x_A Hepatocyte growth facto 100.0 2.4E-40 8.1E-45 362.3 17.5 260 556-836 91-357 (373)
117 3pls_A Macrophage-stimulating 100.0 7.2E-40 2.5E-44 348.7 20.8 261 556-836 23-289 (298)
118 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-39 4.7E-44 348.3 23.0 247 554-828 6-259 (318)
119 3a8x_A Protein kinase C IOTA t 100.0 8E-40 2.7E-44 354.4 21.2 256 554-828 9-276 (345)
120 2yfx_A Tyrosine-protein kinase 100.0 4.2E-40 1.4E-44 355.3 18.9 269 548-834 24-304 (327)
121 2wqm_A Serine/threonine-protei 100.0 7.2E-40 2.5E-44 350.8 20.6 269 552-837 30-300 (310)
122 4fvq_A Tyrosine-protein kinase 100.0 2.7E-40 9.1E-45 350.4 17.1 256 553-836 7-277 (289)
123 3qd2_B Eukaryotic translation 100.0 2.6E-40 9E-45 357.9 17.3 254 554-828 6-326 (332)
124 1ob3_A PFPK5, cell division co 100.0 7.9E-40 2.7E-44 346.4 20.5 261 556-828 4-281 (288)
125 2ozo_A Tyrosine-protein kinase 100.0 7.5E-40 2.5E-44 381.1 22.0 251 561-833 343-597 (613)
126 1xjd_A Protein kinase C, theta 100.0 2.8E-40 9.7E-45 357.1 17.2 249 554-827 17-269 (345)
127 1o6v_A Internalin A; bacterial 100.0 8.1E-39 2.8E-43 362.6 29.9 358 11-411 33-390 (466)
128 3kmu_A ILK, integrin-linked ki 100.0 6.4E-40 2.2E-44 343.9 19.3 254 554-834 10-270 (271)
129 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.6E-39 5.5E-44 352.5 23.0 247 554-828 41-294 (350)
130 4eut_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 361.2 21.8 274 554-835 9-310 (396)
131 3kfa_A Tyrosine-protein kinase 100.0 1E-39 3.5E-44 345.7 20.7 259 553-834 12-271 (288)
132 3brb_A Proto-oncogene tyrosine 100.0 6.3E-40 2.2E-44 351.7 19.3 267 553-837 33-311 (313)
133 4aw2_A Serine/threonine-protei 100.0 8.5E-40 2.9E-44 363.6 20.8 258 554-828 74-339 (437)
134 3gni_B Strad alpha; kinase fol 100.0 1.6E-39 5.5E-44 359.5 22.8 275 552-832 23-340 (389)
135 1u59_A Tyrosine-protein kinase 100.0 1.4E-39 4.8E-44 344.4 21.3 257 557-835 13-273 (287)
136 1u5q_A Serine/threonine protei 100.0 1.5E-39 5.1E-44 352.9 21.9 257 551-833 51-311 (348)
137 2id5_A Lingo-1, leucine rich r 100.0 3.8E-39 1.3E-43 366.9 26.3 328 80-436 33-360 (477)
138 3t9t_A Tyrosine-protein kinase 100.0 1.4E-39 4.7E-44 340.6 20.8 256 554-834 8-264 (267)
139 1fvr_A Tyrosine-protein kinase 100.0 9.7E-40 3.3E-44 352.5 20.2 264 551-835 22-301 (327)
140 3f66_A Hepatocyte growth facto 100.0 1.2E-39 3.9E-44 347.1 20.0 262 555-837 26-294 (298)
141 2h8h_A Proto-oncogene tyrosine 100.0 7.2E-40 2.4E-44 376.0 19.7 262 552-838 265-527 (535)
142 1kob_A Twitchin; kinase, intra 100.0 1.2E-39 4.1E-44 357.8 20.5 253 554-828 51-305 (387)
143 3dls_A PAS domain-containing s 100.0 7.7E-40 2.6E-44 353.6 18.6 246 552-828 22-275 (335)
144 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-40 5.2E-45 357.1 13.0 265 554-835 31-311 (318)
145 1mqb_A Ephrin type-A receptor 100.0 1E-39 3.6E-44 352.7 19.6 260 554-834 44-309 (333)
146 2y94_A 5'-AMP-activated protei 100.0 1.1E-39 3.9E-44 366.3 20.5 250 554-828 16-267 (476)
147 3a7i_A MST3 kinase, serine/thr 100.0 2.3E-39 7.7E-44 345.7 21.5 257 549-830 17-273 (303)
148 3cc6_A Protein tyrosine kinase 100.0 1.7E-39 5.9E-44 342.6 20.3 258 553-833 11-272 (281)
149 2a2a_A Death-associated protei 100.0 2.6E-39 8.8E-44 348.1 21.9 255 552-828 10-273 (321)
150 2eue_A Carbon catabolite derep 100.0 8.2E-40 2.8E-44 343.9 17.4 248 555-828 14-263 (275)
151 3v8s_A RHO-associated protein 100.0 1.2E-39 4.1E-44 359.7 19.3 255 554-828 69-330 (410)
152 2i0e_A Protein kinase C-beta I 100.0 2.4E-39 8.2E-44 351.0 21.3 250 554-828 20-277 (353)
153 3cok_A Serine/threonine-protei 100.0 2.7E-39 9.2E-44 340.5 21.1 251 554-828 11-263 (278)
154 3op5_A Serine/threonine-protei 100.0 7.6E-40 2.6E-44 358.6 17.4 269 554-834 35-329 (364)
155 2v62_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 353.9 19.0 271 554-837 37-331 (345)
156 3mdy_A Bone morphogenetic prot 100.0 1E-38 3.6E-43 346.2 25.7 269 552-837 35-334 (337)
157 2x4f_A Myosin light chain kina 100.0 1.7E-39 5.8E-44 355.8 19.6 248 559-828 94-343 (373)
158 3p1a_A MYT1 kinase, membrane-a 100.0 5.3E-39 1.8E-43 343.8 23.0 248 553-828 56-305 (311)
159 4agu_A Cyclin-dependent kinase 100.0 4.9E-39 1.7E-43 344.5 22.7 264 555-828 4-285 (311)
160 3mtl_A Cell division protein k 100.0 5E-40 1.7E-44 353.9 15.1 262 556-828 4-282 (324)
161 2vd5_A DMPK protein; serine/th 100.0 1.5E-39 5E-44 359.2 19.1 257 554-828 61-328 (412)
162 2w5a_A Serine/threonine-protei 100.0 6.5E-40 2.2E-44 345.5 15.4 260 554-833 6-273 (279)
163 3lxl_A Tyrosine-protein kinase 100.0 2.4E-40 8.3E-45 357.2 12.3 265 553-834 22-303 (327)
164 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-39 5.3E-44 349.9 18.5 249 559-828 16-271 (325)
165 1qpc_A LCK kinase; alpha beta 100.0 3.4E-39 1.1E-43 340.0 20.7 259 552-835 11-270 (279)
166 3a62_A Ribosomal protein S6 ki 100.0 5.5E-39 1.9E-43 346.0 22.7 251 553-828 16-277 (327)
167 3f3z_A Calcium/calmodulin-depe 100.0 6.4E-39 2.2E-43 337.5 22.7 249 552-828 7-262 (277)
168 3uzp_A CKI-delta, CKID, casein 100.0 9.1E-39 3.1E-43 339.8 24.1 264 553-836 8-282 (296)
169 3dbq_A Dual specificity protei 100.0 1.6E-39 5.4E-44 353.0 18.3 255 554-830 9-276 (343)
170 2acx_A G protein-coupled recep 100.0 3.6E-39 1.2E-43 366.6 22.0 255 554-828 184-445 (576)
171 3kk8_A Calcium/calmodulin depe 100.0 6.3E-39 2.1E-43 338.9 22.4 254 553-828 5-262 (284)
172 3fdn_A Serine/threonine-protei 100.0 2.2E-39 7.4E-44 341.4 18.6 249 554-829 9-259 (279)
173 1b6c_B TGF-B superfamily recep 100.0 9.9E-39 3.4E-43 347.1 24.3 265 553-836 41-338 (342)
174 1xbb_A Tyrosine-protein kinase 100.0 3.9E-39 1.3E-43 341.7 20.5 258 554-834 16-279 (291)
175 4hgt_A Casein kinase I isoform 100.0 9.7E-39 3.3E-43 339.6 23.6 264 552-835 7-281 (296)
176 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.9E-39 1.7E-43 364.9 22.6 258 554-828 185-449 (543)
177 3ork_A Serine/threonine protei 100.0 3.7E-40 1.2E-44 353.0 12.6 263 553-834 11-281 (311)
178 1x8b_A WEE1HU, WEE1-like prote 100.0 1.7E-39 5.7E-44 344.1 17.5 250 553-828 10-280 (289)
179 2zmd_A Dual specificity protei 100.0 3.1E-39 1.1E-43 356.1 20.2 254 554-829 56-322 (390)
180 4ejn_A RAC-alpha serine/threon 100.0 1E-39 3.5E-44 367.4 16.7 251 553-828 147-405 (446)
181 3g33_A Cell division protein k 100.0 3.8E-39 1.3E-43 344.8 20.2 263 554-828 9-297 (308)
182 3gxj_A TGF-beta receptor type- 100.0 1.4E-40 4.8E-45 355.1 9.0 265 554-837 3-300 (303)
183 3hko_A Calcium/calmodulin-depe 100.0 3.4E-39 1.2E-43 351.2 20.0 271 551-835 23-340 (345)
184 1nxk_A MAP kinase-activated pr 100.0 6.3E-39 2.2E-43 354.7 22.4 248 560-831 68-325 (400)
185 3fme_A Dual specificity mitoge 100.0 2.4E-39 8.3E-44 343.2 18.2 257 554-828 7-267 (290)
186 1jl5_A Outer protein YOPM; leu 100.0 1.7E-38 5.8E-43 356.6 26.0 359 2-413 11-415 (454)
187 3eqc_A Dual specificity mitoge 100.0 3.8E-39 1.3E-43 352.9 20.1 263 553-828 32-325 (360)
188 2qr7_A Ribosomal protein S6 ki 100.0 3.9E-39 1.3E-43 348.5 19.9 255 552-829 20-279 (342)
189 2h34_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43 341.4 22.8 262 554-836 34-298 (309)
190 2rku_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 341.0 20.5 253 554-831 15-269 (294)
191 2a19_B Interferon-induced, dou 100.0 2.2E-39 7.5E-44 342.4 17.2 252 553-837 10-277 (284)
192 4fl3_A Tyrosine-protein kinase 100.0 4.5E-39 1.6E-43 375.3 21.5 251 560-833 375-630 (635)
193 3oz6_A Mitogen-activated prote 100.0 4.2E-39 1.4E-43 356.0 20.1 268 554-832 9-335 (388)
194 3bhy_A Death-associated protei 100.0 8.1E-39 2.8E-43 337.9 21.4 258 554-833 5-273 (283)
195 2ac3_A MAP kinase-interacting 100.0 2.8E-39 9.4E-44 347.3 18.1 258 554-828 12-296 (316)
196 3nsz_A CK II alpha, casein kin 100.0 7.2E-39 2.5E-43 346.3 21.4 258 552-828 34-320 (330)
197 2w1i_A JAK2; chromosomal rearr 100.0 7E-39 2.4E-43 345.5 20.9 266 553-834 40-322 (326)
198 3an0_A Dual specificity mitoge 100.0 2.7E-39 9.1E-44 351.1 17.7 256 555-828 52-311 (340)
199 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.2E-39 1.4E-43 347.5 18.4 265 553-828 33-319 (329)
200 3bz5_A Internalin-J, INLJ; leu 100.0 5.2E-38 1.8E-42 352.9 27.8 342 2-414 42-392 (457)
201 2jii_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 350.1 19.3 265 554-835 42-337 (352)
202 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-38 3.8E-43 349.6 21.8 254 554-834 65-339 (365)
203 2h6d_A 5'-AMP-activated protei 100.0 7.6E-39 2.6E-43 336.7 19.5 250 554-828 11-262 (276)
204 2vgo_A Serine/threonine-protei 100.0 1E-38 3.5E-43 337.2 20.6 248 554-828 14-263 (284)
205 1ua2_A CAK, cell division prot 100.0 2.3E-38 7.9E-43 344.3 23.8 267 554-830 10-294 (346)
206 2r5t_A Serine/threonine-protei 100.0 3E-39 1E-43 352.7 16.8 246 554-824 38-286 (373)
207 1t4h_A Serine/threonine-protei 100.0 8.3E-39 2.9E-43 339.0 19.7 249 555-828 27-283 (290)
208 3i6u_A CDS1, serine/threonine- 100.0 3.5E-39 1.2E-43 359.3 17.6 255 553-828 134-400 (419)
209 2owb_A Serine/threonine-protei 100.0 5.7E-39 2E-43 347.4 18.8 252 553-829 40-293 (335)
210 4aaa_A Cyclin-dependent kinase 100.0 7.1E-39 2.4E-43 346.2 19.4 268 551-828 22-307 (331)
211 3g2f_A Bone morphogenetic prot 100.0 8.1E-39 2.8E-43 346.8 19.7 272 554-837 13-321 (336)
212 1vzo_A Ribosomal protein S6 ki 100.0 6.8E-39 2.3E-43 349.3 18.9 257 554-829 54-323 (355)
213 2j7t_A Serine/threonine-protei 100.0 9.7E-39 3.3E-43 340.7 19.7 259 549-828 14-276 (302)
214 2clq_A Mitogen-activated prote 100.0 3E-38 1E-42 335.7 23.3 252 558-828 26-279 (295)
215 2vwi_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 348.3 12.0 266 554-828 15-288 (303)
216 3com_A Serine/threonine-protei 100.0 2.1E-38 7.2E-43 340.1 22.0 255 550-828 25-279 (314)
217 3eb0_A Putative uncharacterize 100.0 4.3E-39 1.5E-43 355.1 16.9 262 554-828 7-322 (383)
218 1byg_A CSK, protein (C-termina 100.0 5.6E-39 1.9E-43 338.1 17.0 252 553-834 20-273 (278)
219 3ttj_A Mitogen-activated prote 100.0 7.7E-39 2.6E-43 360.4 19.1 261 553-828 61-356 (464)
220 3lm5_A Serine/threonine-protei 100.0 1.3E-38 4.6E-43 343.3 20.2 256 553-828 27-288 (327)
221 1cm8_A Phosphorylated MAP kina 100.0 1E-38 3.4E-43 349.3 19.3 264 553-833 24-315 (367)
222 2r3i_A Cell division protein k 100.0 3.1E-38 1.1E-42 336.2 22.5 271 555-837 4-295 (299)
223 2jam_A Calcium/calmodulin-depe 100.0 3.4E-38 1.1E-42 336.7 22.3 254 552-829 7-263 (304)
224 2id5_A Lingo-1, leucine rich r 100.0 6E-38 2E-42 357.1 25.8 320 5-361 14-333 (477)
225 3llt_A Serine/threonine kinase 100.0 2.8E-38 9.5E-43 346.0 22.1 260 553-828 34-356 (360)
226 3n9x_A Phosphotransferase; mal 100.0 2E-38 6.8E-43 354.9 21.0 202 553-762 25-252 (432)
227 1j1b_A Glycogen synthase kinas 100.0 3.2E-38 1.1E-42 351.7 22.3 266 555-833 55-344 (420)
228 3qyz_A Mitogen-activated prote 100.0 2.9E-38 9.8E-43 346.1 21.4 265 553-828 26-314 (364)
229 3rp9_A Mitogen-activated prote 100.0 1.5E-38 5E-43 359.6 19.7 266 554-828 53-397 (458)
230 2y7j_A Phosphorylase B kinase 100.0 6.8E-38 2.3E-42 342.6 24.1 254 554-828 94-360 (365)
231 3byv_A Rhoptry kinase; malaria 100.0 5.8E-40 2E-44 361.2 7.6 253 553-834 72-368 (377)
232 3mwu_A Calmodulin-domain prote 100.0 5.8E-38 2E-42 357.2 24.2 254 552-828 20-277 (486)
233 2ycf_A Serine/threonine-protei 100.0 2E-38 6.7E-43 341.5 19.2 255 553-828 9-275 (322)
234 3lij_A Calcium/calmodulin depe 100.0 5.9E-38 2E-42 357.7 24.2 254 552-828 35-292 (494)
235 3mi9_A Cell division protein k 100.0 7E-38 2.4E-42 341.5 23.7 272 553-835 16-319 (351)
236 3q5i_A Protein kinase; CDPK, m 100.0 6.2E-38 2.1E-42 358.4 24.1 254 552-828 34-302 (504)
237 3nyv_A Calmodulin-domain prote 100.0 3E-38 1E-42 359.7 21.2 254 552-828 24-282 (484)
238 1o6v_A Internalin A; bacterial 100.0 3E-37 1E-41 349.7 29.0 347 48-434 43-390 (466)
239 3sv0_A Casein kinase I-like; t 100.0 1.3E-37 4.6E-42 350.1 25.7 260 554-833 7-277 (483)
240 3q60_A ROP5B; pseudokinase, tr 100.0 7.6E-39 2.6E-43 351.6 15.0 254 556-828 64-353 (371)
241 3e3p_A Protein kinase, putativ 100.0 1.9E-38 6.5E-43 347.5 17.2 272 553-834 22-323 (360)
242 3ll6_A Cyclin G-associated kin 100.0 2.3E-38 7.8E-43 343.4 17.6 258 554-834 28-308 (337)
243 1phk_A Phosphorylase kinase; g 100.0 2.2E-37 7.4E-42 329.5 24.3 254 554-828 17-284 (298)
244 1u46_A ACK-1, activated CDC42 100.0 2.1E-38 7.3E-43 336.1 16.3 263 553-836 17-286 (291)
245 3kvw_A DYRK2, dual specificity 100.0 1.1E-37 3.7E-42 348.2 22.7 260 554-828 97-409 (429)
246 2b9h_A MAP kinase FUS3, mitoge 100.0 2.1E-38 7.1E-43 346.1 16.5 270 553-833 10-313 (353)
247 2wtk_C Serine/threonine-protei 100.0 7.5E-38 2.6E-42 334.3 20.4 254 555-829 6-265 (305)
248 2x7f_A TRAF2 and NCK-interacti 100.0 8E-38 2.8E-42 337.4 20.8 256 551-828 21-287 (326)
249 2j0j_A Focal adhesion kinase 1 100.0 4.9E-38 1.7E-42 367.9 20.5 258 553-833 389-650 (656)
250 2pml_X PFPK7, Ser/Thr protein 100.0 4.3E-38 1.5E-42 342.9 18.1 259 554-828 31-323 (348)
251 2xrw_A Mitogen-activated prote 100.0 1E-37 3.4E-42 342.4 21.0 261 554-829 25-320 (371)
252 1zy4_A Serine/threonine-protei 100.0 5.1E-38 1.7E-42 335.2 18.1 254 553-828 5-284 (303)
253 4e7w_A Glycogen synthase kinas 100.0 1.3E-37 4.4E-42 344.0 21.5 266 554-833 40-329 (394)
254 2fst_X Mitogen-activated prote 100.0 2.1E-38 7.2E-43 346.3 14.6 259 554-828 29-312 (367)
255 3pfq_A PKC-B, PKC-beta, protei 100.0 6.9E-38 2.4E-42 367.8 19.7 250 554-828 341-598 (674)
256 3rgf_A Cyclin-dependent kinase 100.0 8.8E-38 3E-42 347.3 19.0 272 554-835 20-341 (405)
257 4exu_A Mitogen-activated prote 100.0 9.8E-38 3.4E-42 342.5 19.0 259 554-828 42-324 (371)
258 3o6n_A APL1; leucine-rich repe 100.0 1.1E-36 3.8E-41 337.0 27.3 334 78-436 44-378 (390)
259 1blx_A Cyclin-dependent kinase 100.0 4.1E-37 1.4E-41 331.9 22.8 266 552-828 9-297 (326)
260 3pg1_A Mitogen-activated prote 100.0 1E-37 3.5E-42 341.8 18.4 262 554-828 22-317 (362)
261 2wei_A Calmodulin-domain prote 100.0 4.5E-37 1.5E-41 325.1 22.5 254 552-828 20-277 (287)
262 2y4i_B KSR2, HKSR2, kinase sup 100.0 1E-37 3.5E-42 335.5 17.8 260 554-836 33-304 (319)
263 1wak_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 345.1 19.1 263 553-828 36-392 (397)
264 3a99_A Proto-oncogene serine/t 100.0 4E-38 1.4E-42 338.4 13.6 244 553-828 42-294 (320)
265 3coi_A Mitogen-activated prote 100.0 3.9E-37 1.3E-41 335.8 21.1 259 554-828 24-306 (353)
266 3fhr_A MAP kinase-activated pr 100.0 2.4E-37 8.3E-42 334.5 19.3 256 552-829 26-289 (336)
267 3aln_A Dual specificity mitoge 100.0 1.3E-37 4.6E-42 335.8 17.2 259 554-828 22-286 (327)
268 3cek_A Dual specificity protei 100.0 3.4E-37 1.2E-41 330.4 19.9 255 554-830 28-295 (313)
269 3oja_B Anopheles plasmodium-re 100.0 1.9E-36 6.6E-41 353.5 27.5 335 78-436 50-384 (597)
270 2i6l_A Mitogen-activated prote 100.0 2.4E-37 8.2E-42 332.8 17.7 265 553-828 10-306 (320)
271 1z57_A Dual specificity protei 100.0 6.8E-37 2.3E-41 332.1 20.9 264 554-833 14-336 (339)
272 2iwi_A Serine/threonine-protei 100.0 8.4E-38 2.9E-42 335.0 13.3 244 553-828 30-284 (312)
273 2dyl_A Dual specificity mitoge 100.0 6.8E-37 2.3E-41 329.0 20.3 254 554-828 25-284 (318)
274 2rio_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 342.9 20.2 258 551-828 12-296 (434)
275 1jl5_A Outer protein YOPM; leu 100.0 2.5E-35 8.5E-40 330.8 33.1 346 3-414 72-434 (454)
276 2vx3_A Dual specificity tyrosi 100.0 9.4E-37 3.2E-41 336.3 20.9 200 554-765 54-261 (382)
277 3o6n_A APL1; leucine-rich repe 100.0 9.4E-36 3.2E-40 329.5 25.6 311 26-387 44-354 (390)
278 3bz5_A Internalin-J, INLJ; leu 100.0 1.5E-35 5.1E-40 332.9 27.2 340 22-430 37-385 (457)
279 1q8y_A SR protein kinase; tran 100.0 7.3E-37 2.5E-41 336.6 15.9 262 554-828 19-334 (373)
280 2eu9_A Dual specificity protei 100.0 6.1E-36 2.1E-40 326.8 22.9 260 553-828 18-334 (355)
281 3p23_A Serine/threonine-protei 100.0 2.4E-36 8.1E-41 336.9 19.9 250 555-828 25-284 (432)
282 3qa8_A MGC80376 protein; kinas 100.0 6.8E-37 2.3E-41 350.8 14.4 271 554-833 14-308 (676)
283 4fmz_A Internalin; leucine ric 100.0 7.6E-35 2.6E-39 317.0 27.8 307 23-385 40-346 (347)
284 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-35 3.8E-40 317.8 19.2 258 152-441 51-312 (313)
285 4fmz_A Internalin; leucine ric 100.0 1E-34 3.5E-39 316.0 27.2 318 34-409 29-346 (347)
286 3uqc_A Probable conserved tran 100.0 1.8E-35 6E-40 311.7 19.1 231 554-835 31-266 (286)
287 3oja_B Anopheles plasmodium-re 100.0 6.8E-35 2.3E-39 340.4 25.7 311 27-388 51-361 (597)
288 3m2w_A MAP kinase-activated pr 100.0 1.3E-34 4.6E-39 307.9 23.1 223 560-829 24-258 (299)
289 2pzi_A Probable serine/threoni 100.0 2.6E-35 9E-40 348.6 14.6 240 554-832 80-326 (681)
290 3dzo_A Rhoptry kinase domain; 100.0 2.1E-35 7.2E-40 328.1 12.5 244 556-828 80-364 (413)
291 2ft3_A Biglycan; proteoglycan, 100.0 2E-33 6.7E-38 303.6 24.5 130 277-407 194-331 (332)
292 1xku_A Decorin; proteoglycan, 100.0 4.6E-33 1.6E-37 300.5 26.2 295 52-407 32-330 (330)
293 1xku_A Decorin; proteoglycan, 100.0 1.3E-32 4.6E-37 296.9 27.2 288 79-429 31-329 (330)
294 2vuw_A Serine/threonine-protei 100.0 1.3E-34 4.5E-39 313.4 11.5 245 553-828 19-332 (336)
295 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-33 4E-38 302.1 18.3 253 127-411 50-307 (313)
296 2ft3_A Biglycan; proteoglycan, 100.0 1.5E-32 5.2E-37 296.6 25.4 288 52-383 34-331 (332)
297 1z7x_W Ribonuclease inhibitor; 100.0 6.6E-37 2.3E-41 347.1 -9.3 381 2-409 3-440 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-35 4.8E-40 336.2 -7.8 361 26-411 2-413 (461)
299 2z80_A TOLL-like receptor 2, v 100.0 5.8E-30 2E-34 278.9 17.0 199 6-212 35-235 (353)
300 2z80_A TOLL-like receptor 2, v 100.0 1E-29 3.4E-34 277.1 18.6 254 80-387 53-316 (353)
301 2z66_A Variable lymphocyte rec 100.0 2.8E-29 9.5E-34 267.9 17.9 275 82-413 10-291 (306)
302 2z66_A Variable lymphocyte rec 100.0 2.4E-29 8.2E-34 268.3 16.8 281 53-370 9-296 (306)
303 4fcg_A Uncharacterized protein 100.0 1.2E-28 4.1E-33 264.8 20.3 233 127-408 81-313 (328)
304 3zyi_A Leucine-rich repeat-con 100.0 3.9E-28 1.4E-32 273.6 25.1 246 106-385 57-303 (452)
305 3zyj_A Leucine-rich repeat-con 100.0 4.2E-28 1.4E-32 272.4 23.1 247 104-384 44-291 (440)
306 3g06_A SSPH2 (leucine-rich rep 100.0 1.3E-27 4.3E-32 276.1 27.4 269 27-372 40-308 (622)
307 3zyi_A Leucine-rich repeat-con 100.0 1E-27 3.5E-32 270.3 24.9 248 81-361 56-303 (452)
308 3o53_A Protein LRIM1, AGAP0063 100.0 5.1E-30 1.7E-34 274.6 5.8 267 105-414 12-281 (317)
309 1ozn_A Reticulon 4 receptor; N 100.0 2.6E-28 8.8E-33 257.4 18.8 123 82-207 14-137 (285)
310 3zyj_A Leucine-rich repeat-con 100.0 1.1E-27 3.7E-32 269.1 24.3 248 81-361 45-292 (440)
311 1ozn_A Reticulon 4 receptor; N 100.0 3.9E-28 1.3E-32 256.0 19.2 133 79-211 32-165 (285)
312 3g06_A SSPH2 (leucine-rich rep 100.0 2.9E-27 1E-31 273.1 27.6 268 52-396 41-308 (622)
313 4fcg_A Uncharacterized protein 100.0 1E-27 3.6E-32 257.5 21.8 232 79-359 81-312 (328)
314 3ogk_B Coronatine-insensitive 100.0 4.2E-31 1.4E-35 309.4 -6.9 377 24-411 109-528 (592)
315 3o53_A Protein LRIM1, AGAP0063 100.0 4.8E-29 1.7E-33 267.0 8.5 258 3-308 11-270 (317)
316 1wwl_A Monocyte differentiatio 99.9 3E-29 1E-33 268.0 3.9 252 125-410 41-310 (312)
317 3ogk_B Coronatine-insensitive 99.9 3.5E-30 1.2E-34 301.5 -5.0 398 1-406 111-548 (592)
318 4azs_A Methyltransferase WBDD; 99.9 1.2E-28 4.2E-33 282.9 6.2 188 561-762 241-438 (569)
319 1wwl_A Monocyte differentiatio 99.9 8.6E-29 2.9E-33 264.5 4.5 134 46-188 38-186 (312)
320 3oja_A Leucine-rich immune mol 99.9 4.1E-28 1.4E-32 274.9 8.6 235 128-405 35-271 (487)
321 3oja_A Leucine-rich immune mol 99.9 1.5E-26 5E-31 262.2 12.5 237 78-356 33-270 (487)
322 2o6q_A Variable lymphocyte rec 99.9 1E-24 3.5E-29 227.7 23.1 206 3-216 17-222 (270)
323 2p1m_B Transport inhibitor res 99.9 2.1E-28 7E-33 286.7 -6.1 395 1-409 65-519 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 5.6E-25 1.9E-29 230.7 20.0 211 175-415 28-243 (276)
325 3rfs_A Internalin B, repeat mo 99.9 1.7E-25 5.7E-30 233.8 15.3 221 4-241 21-241 (272)
326 2z62_A TOLL-like receptor 4, v 99.9 5E-25 1.7E-29 231.0 18.7 223 6-237 11-239 (276)
327 1p9a_G Platelet glycoprotein I 99.9 1.5E-24 5.1E-29 228.4 21.0 202 1-214 9-210 (290)
328 3en9_A Glycoprotease, O-sialog 99.9 9.2E-26 3.2E-30 257.6 8.0 186 559-763 341-539 (540)
329 2o6q_A Variable lymphocyte rec 99.9 1E-23 3.4E-28 220.1 21.9 160 252-411 61-220 (270)
330 3rfs_A Internalin B, repeat mo 99.9 3.1E-24 1.1E-28 224.2 16.9 206 1-222 40-245 (272)
331 1p9a_G Platelet glycoprotein I 99.9 8.6E-24 3E-28 222.6 18.3 204 171-410 6-209 (290)
332 2p1m_B Transport inhibitor res 99.9 1.1E-26 3.8E-31 271.9 -6.5 399 1-409 104-544 (594)
333 3goz_A Leucine-rich repeat-con 99.9 2.2E-25 7.5E-30 243.3 0.6 262 84-394 3-306 (362)
334 2ca6_A RAN GTPase-activating p 99.9 1.8E-25 6.2E-30 246.5 -1.7 290 80-403 10-337 (386)
335 2xwt_C Thyrotropin receptor; s 99.9 2.5E-23 8.6E-28 213.0 13.9 208 11-232 20-236 (239)
336 3goz_A Leucine-rich repeat-con 99.9 7.2E-25 2.4E-29 239.3 1.0 256 133-413 4-301 (362)
337 1h6u_A Internalin H; cell adhe 99.9 7.3E-23 2.5E-27 217.7 16.3 191 25-235 39-230 (308)
338 2ca6_A RAN GTPase-activating p 99.9 5.6E-25 1.9E-29 242.6 -0.5 243 142-413 23-320 (386)
339 2xwt_C Thyrotropin receptor; s 99.9 4.3E-23 1.5E-27 211.3 12.8 195 52-262 32-236 (239)
340 3m19_A Variable lymphocyte rec 99.9 3E-22 1E-26 206.5 19.0 180 28-214 15-194 (251)
341 3m19_A Variable lymphocyte rec 99.9 4.2E-22 1.4E-26 205.4 19.3 180 3-190 15-194 (251)
342 4glp_A Monocyte differentiatio 99.9 5.9E-23 2E-27 219.0 12.1 153 251-409 144-307 (310)
343 4glp_A Monocyte differentiatio 99.9 4.7E-23 1.6E-27 219.7 10.6 225 27-266 64-308 (310)
344 1h6u_A Internalin H; cell adhe 99.9 4.4E-22 1.5E-26 211.7 17.9 124 252-385 107-230 (308)
345 4ay9_X Follicle-stimulating ho 99.9 3.6E-22 1.2E-26 216.7 17.5 200 5-212 12-215 (350)
346 2ast_B S-phase kinase-associat 99.9 9.6E-24 3.3E-28 228.2 4.2 249 129-414 49-311 (336)
347 2ast_B S-phase kinase-associat 99.9 9.7E-24 3.3E-28 228.1 4.0 128 81-212 49-182 (336)
348 4ay9_X Follicle-stimulating ho 99.9 4.9E-21 1.7E-25 207.7 20.6 240 82-358 12-256 (350)
349 1zar_A RIO2 kinase; serine kin 99.9 3.6E-22 1.2E-26 208.7 8.7 142 557-733 93-251 (282)
350 2o6s_A Variable lymphocyte rec 99.8 5.7E-21 1.9E-25 190.9 15.1 181 5-200 10-190 (208)
351 3cvr_A Invasion plasmid antige 99.8 5.4E-21 1.9E-25 217.9 15.4 189 152-397 60-255 (571)
352 2v70_A SLIT-2, SLIT homolog 2 99.8 4.4E-21 1.5E-25 193.1 10.2 158 254-414 13-171 (220)
353 2o6s_A Variable lymphocyte rec 99.8 2.2E-20 7.7E-25 186.5 14.2 133 80-212 29-161 (208)
354 3cvr_A Invasion plasmid antige 99.8 4.7E-20 1.6E-24 210.2 16.8 180 28-239 60-247 (571)
355 2v9t_B SLIT homolog 2 protein 99.8 7.5E-20 2.6E-24 184.1 15.4 154 255-411 14-167 (220)
356 1h6t_A Internalin B; cell adhe 99.8 2.5E-20 8.5E-25 196.3 11.7 188 5-213 27-214 (291)
357 1h6t_A Internalin B; cell adhe 99.8 4E-20 1.4E-24 194.7 12.7 170 1-189 45-214 (291)
358 2xot_A Amphoterin-induced prot 99.8 8.9E-20 3E-24 198.6 14.4 160 252-411 39-204 (361)
359 1m9s_A Internalin B; cell inva 99.8 5.8E-20 2E-24 212.0 13.1 189 4-213 23-211 (605)
360 2xot_A Amphoterin-induced prot 99.8 8.1E-20 2.8E-24 198.9 12.8 178 30-214 21-204 (361)
361 3e6j_A Variable lymphocyte rec 99.8 2.9E-19 1E-23 181.0 15.4 157 253-413 20-176 (229)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 4.4E-19 1.5E-23 178.5 16.3 156 54-216 14-170 (220)
363 1m9s_A Internalin B; cell inva 99.8 2.3E-19 7.8E-24 207.0 14.7 175 1-194 42-216 (605)
364 2v9t_B SLIT homolog 2 protein 99.8 8.7E-19 3E-23 176.3 16.6 135 79-213 32-166 (220)
365 3e6j_A Variable lymphocyte rec 99.8 3.9E-18 1.3E-22 172.7 17.4 156 53-216 21-176 (229)
366 1dce_A Protein (RAB geranylger 99.8 2.7E-21 9.3E-26 221.8 -7.1 201 174-403 348-567 (567)
367 4ezg_A Putative uncharacterize 99.8 1.3E-18 4.4E-23 172.0 12.2 154 249-410 41-195 (197)
368 1w8a_A SLIT protein; signaling 99.8 1.9E-18 6.6E-23 169.8 13.3 132 255-389 11-143 (192)
369 1xeu_A Internalin C; cellular 99.8 6E-19 2.1E-23 182.7 9.3 169 26-213 18-186 (263)
370 1dce_A Protein (RAB geranylger 99.8 3.4E-21 1.2E-25 221.0 -10.6 217 124-379 346-567 (567)
371 1w8a_A SLIT protein; signaling 99.8 9.2E-19 3.1E-23 172.1 8.2 157 278-437 10-167 (192)
372 4b8c_D Glucose-repressible alc 99.8 7.6E-19 2.6E-23 208.0 8.9 191 181-411 207-406 (727)
373 4b8c_D Glucose-repressible alc 99.8 4E-19 1.4E-23 210.3 6.4 195 27-262 173-369 (727)
374 1xeu_A Internalin C; cellular 99.7 1.7E-18 5.9E-23 179.2 9.7 169 2-190 19-187 (263)
375 1zth_A RIO1 serine protein kin 99.7 3.4E-18 1.2E-22 176.4 11.6 138 556-709 49-219 (258)
376 3sb4_A Hypothetical leucine ri 99.7 1.3E-18 4.3E-23 187.0 7.7 288 26-379 24-328 (329)
377 4ezg_A Putative uncharacterize 99.7 6.5E-18 2.2E-22 166.9 11.9 178 17-212 16-194 (197)
378 3sb4_A Hypothetical leucine ri 99.7 2.6E-18 8.8E-23 184.6 9.3 290 78-403 24-328 (329)
379 4fdw_A Leucine rich hypothetic 99.7 5.3E-16 1.8E-20 170.0 24.4 147 47-206 109-255 (401)
380 4fdw_A Leucine rich hypothetic 99.7 3.6E-16 1.2E-20 171.4 22.8 275 22-337 108-383 (401)
381 4fs7_A Uncharacterized protein 99.7 4E-16 1.4E-20 171.9 22.3 332 17-400 61-392 (394)
382 2ell_A Acidic leucine-rich nuc 99.7 8.9E-17 3E-21 154.3 10.9 132 276-409 24-160 (168)
383 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.5E-21 152.5 12.4 138 251-391 23-165 (168)
384 2je0_A Acidic leucine-rich nuc 99.7 1.4E-16 4.8E-21 149.6 10.5 127 276-404 17-148 (149)
385 4fs7_A Uncharacterized protein 99.7 2.6E-15 9E-20 165.4 22.2 323 2-377 71-393 (394)
386 2wfh_A SLIT homolog 2 protein 99.7 4E-16 1.4E-20 153.1 13.8 128 280-411 14-141 (193)
387 2je0_A Acidic leucine-rich nuc 99.7 2E-16 6.9E-21 148.5 9.4 129 251-381 16-149 (149)
388 2o6r_A Variable lymphocyte rec 99.6 6.7E-16 2.3E-20 149.6 12.6 130 254-386 9-138 (177)
389 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.3E-20 149.5 13.7 127 30-164 13-139 (193)
390 2o6r_A Variable lymphocyte rec 99.6 1.5E-15 5E-20 147.1 13.1 135 277-414 8-142 (177)
391 1a9n_A U2A', U2A'; complex (nu 99.6 1.5E-15 5.2E-20 146.8 9.9 134 272-411 15-155 (176)
392 1ds9_A Outer arm dynein; leuci 99.6 4.9E-17 1.7E-21 160.7 -3.7 151 252-409 18-185 (198)
393 4gt6_A Cell surface protein; l 99.6 3.4E-13 1.2E-17 148.4 26.3 336 17-408 53-390 (394)
394 4gyi_A RIO2 kinase; protein ki 99.6 1.2E-15 4E-20 162.9 5.7 138 555-708 96-264 (397)
395 1a9n_A U2A', U2A'; complex (nu 99.6 5.1E-15 1.7E-19 143.1 8.9 132 250-386 17-154 (176)
396 3g39_A Variable lymphocyte rec 99.5 2.4E-14 8.1E-19 137.3 10.4 107 303-412 12-118 (170)
397 1ds9_A Outer arm dynein; leuci 99.5 5.9E-16 2E-20 152.9 -3.8 157 223-386 19-186 (198)
398 2r9u_A Variable lymphocyte rec 99.5 6.7E-14 2.3E-18 134.6 10.5 104 279-385 15-118 (174)
399 4gt6_A Cell surface protein; l 99.5 2.3E-12 7.7E-17 141.8 23.9 324 3-385 65-391 (394)
400 3g39_A Variable lymphocyte rec 99.4 3.1E-13 1.1E-17 129.5 11.8 107 279-388 12-118 (170)
401 2r9u_A Variable lymphocyte rec 99.4 3.8E-13 1.3E-17 129.3 11.3 108 303-413 15-122 (174)
402 3un9_A NLR family member X1; l 99.3 5.9E-14 2E-18 152.2 -2.3 161 251-411 71-254 (372)
403 3un9_A NLR family member X1; l 99.3 2.4E-14 8.2E-19 155.4 -5.8 183 27-212 72-283 (372)
404 2ifg_A High affinity nerve gro 99.3 4.1E-12 1.4E-16 137.3 9.1 103 280-385 12-116 (347)
405 2ifg_A High affinity nerve gro 99.3 7.7E-12 2.6E-16 135.1 11.1 105 304-411 12-118 (347)
406 4h09_A Hypothetical leucine ri 99.3 4.1E-10 1.4E-14 123.1 24.5 302 23-371 42-355 (379)
407 4h09_A Hypothetical leucine ri 99.1 3.8E-09 1.3E-13 115.4 24.1 297 79-405 46-342 (379)
408 3tm0_A Aminoglycoside 3'-phosp 99.1 1.8E-10 6.1E-15 119.0 11.0 138 558-707 18-212 (263)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 1.1E-09 3.8E-14 112.8 10.5 130 561-707 26-213 (264)
410 3dxp_A Putative acyl-COA dehyd 99.0 1.1E-09 3.9E-14 118.6 9.7 143 560-710 44-250 (359)
411 2ra8_A Uncharacterized protein 98.8 1.4E-09 4.8E-14 116.7 3.8 60 174-233 278-341 (362)
412 3sg8_A APH(2'')-ID; antibiotic 98.8 1.6E-09 5.3E-14 114.5 4.0 185 561-762 27-287 (304)
413 2ra8_A Uncharacterized protein 98.7 3.2E-09 1.1E-13 113.9 4.0 134 273-409 169-320 (362)
414 1io0_A Tropomodulin; LRR prote 98.6 5.3E-09 1.8E-13 101.3 -0.4 119 46-164 31-164 (185)
415 3rw6_A Nuclear RNA export fact 98.6 1.6E-08 5.4E-13 102.8 2.8 80 321-402 167-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.5 8.8E-09 3E-13 99.7 0.2 120 21-140 30-164 (185)
417 3r70_A Aminoglycoside phosphot 98.4 7.1E-07 2.4E-11 94.6 10.4 134 559-710 42-239 (320)
418 3rw6_A Nuclear RNA export fact 98.4 3.5E-08 1.2E-12 100.2 -0.8 79 298-378 168-257 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 3.3E-06 1.1E-10 87.1 13.5 136 561-708 31-223 (272)
420 3d1u_A Putative fructosamine-3 98.3 5.1E-06 1.8E-10 86.1 13.4 140 560-707 21-215 (288)
421 3tdw_A Gentamicin resistance p 98.2 7.5E-06 2.6E-10 86.0 11.8 135 561-709 26-225 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.9E-05 6.7E-10 84.8 12.6 143 560-710 47-245 (362)
423 3ats_A Putative uncharacterize 97.9 1.4E-05 4.9E-10 85.9 8.3 80 561-640 27-121 (357)
424 3e4g_A ATP synthase subunit S, 97.9 5.3E-06 1.8E-10 77.9 3.6 83 301-383 62-150 (176)
425 3e4g_A ATP synthase subunit S, 97.9 4.2E-06 1.4E-10 78.6 2.3 92 316-407 53-150 (176)
426 2olc_A MTR kinase, methylthior 97.8 3.5E-05 1.2E-09 84.3 9.5 76 560-637 36-120 (397)
427 2q83_A YTAA protein; 2635576, 97.8 0.00015 5.1E-09 77.4 13.6 140 561-707 39-251 (346)
428 1pgv_A TMD-1, tropomodulin TMD 97.6 1.2E-05 3.9E-10 77.1 1.1 118 46-163 36-169 (197)
429 1pgv_A TMD-1, tropomodulin TMD 97.6 1.3E-05 4.4E-10 76.8 1.3 117 24-140 38-170 (197)
430 2pyw_A Uncharacterized protein 97.5 7.2E-05 2.5E-09 82.3 6.3 80 677-758 231-312 (420)
431 3jr1_A Putative fructosamine-3 97.4 0.0021 7.1E-08 67.0 15.4 137 561-704 43-232 (312)
432 3f7w_A Putative fructosamine-3 97.3 0.00099 3.4E-08 69.0 11.3 74 560-639 21-97 (288)
433 3rfe_A Platelet glycoprotein I 97.0 0.00084 2.9E-08 60.0 6.1 57 5-64 11-68 (130)
434 3rfe_A Platelet glycoprotein I 96.8 0.0014 4.9E-08 58.4 5.8 55 328-384 12-67 (130)
435 3csv_A Aminoglycoside phosphot 96.8 0.005 1.7E-07 65.1 10.7 142 561-709 25-218 (333)
436 3dxq_A Choline/ethanolamine ki 96.8 0.0037 1.3E-07 65.0 9.4 140 559-709 23-203 (301)
437 1nw1_A Choline kinase (49.2 KD 96.7 0.0052 1.8E-07 67.4 10.1 71 561-638 80-158 (429)
438 2ppq_A HSK, HK, homoserine kin 96.6 0.0062 2.1E-07 64.0 9.8 142 561-707 29-216 (322)
439 3feg_A Choline/ethanolamine ki 96.6 0.0083 2.8E-07 64.2 10.7 142 561-708 57-254 (379)
440 1zyl_A Hypothetical protein YI 96.5 0.016 5.5E-07 61.0 12.1 142 561-708 33-223 (328)
441 2yle_A Protein spire homolog 1 96.4 0.027 9.3E-07 54.0 11.8 102 638-761 34-135 (229)
442 2qg7_A Ethanolamine kinase PV0 96.0 0.032 1.1E-06 61.4 12.0 73 561-639 115-188 (458)
443 3c5i_A Choline kinase; choline 95.9 0.013 4.3E-07 63.0 7.7 72 561-638 40-120 (369)
444 3i1a_A Spectinomycin phosphotr 95.7 0.047 1.6E-06 57.6 11.0 32 678-709 206-237 (339)
445 3f2s_A CK, chetk-alpha, cholin 94.9 0.11 3.9E-06 55.6 10.9 144 561-708 59-280 (401)
446 3mes_A Choline kinase; malaria 93.6 0.23 8E-06 53.7 10.0 141 561-708 77-291 (424)
447 2lz0_A Uncharacterized protein 86.2 0.6 2E-05 38.9 3.9 50 11-62 5-54 (100)
448 3g15_A CK, chetk-alpha, cholin 86.0 3.1 0.00011 44.6 10.6 30 679-708 245-280 (401)
449 4ano_A ESSB; membrane protein, 84.5 3.3 0.00011 39.8 8.6 115 610-763 48-163 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 82.6 0.16 5.6E-06 55.8 -1.5 61 560-623 148-215 (463)
451 4ann_A ESSB; membrane protein, 80.9 2.1 7.3E-05 40.9 5.8 124 602-764 36-159 (215)
452 2jwa_A Receptor tyrosine-prote 78.0 4.2 0.00014 27.6 4.7 9 482-490 12-20 (44)
453 2l2t_A Receptor tyrosine-prote 73.3 5.5 0.00019 27.1 4.4 9 482-490 10-18 (44)
454 2l8s_A Integrin alpha-1; trans 69.1 8.5 0.00029 27.4 4.7 30 482-511 11-40 (54)
455 2lz0_A Uncharacterized protein 66.9 9.5 0.00032 31.5 5.6 49 36-89 5-53 (100)
456 2klu_A T-cell surface glycopro 61.7 6.4 0.00022 29.0 3.0 19 483-501 12-30 (70)
457 1pi7_A VPU protein, U ORF prot 53.4 25 0.00085 22.7 4.4 26 483-508 7-32 (36)
458 2knc_A Integrin alpha-IIB; tra 52.8 27 0.00091 24.9 4.9 29 482-510 14-42 (54)
459 2knc_B Integrin beta-3; transm 37.7 75 0.0026 24.7 5.9 20 480-499 13-32 (79)
460 2k1a_A Integrin alpha-IIB; sin 36.2 41 0.0014 22.6 3.6 20 482-501 12-31 (42)
461 2jp3_A FXYD domain-containing 27.9 1.1E+02 0.0037 22.7 4.8 18 484-501 20-37 (67)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.3e-57 Score=545.80 Aligned_cols=430 Identities=38% Similarity=0.559 Sum_probs=315.2
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccc-cccccccCCCCCCEEECCCCCCccccCCCcCccccCCc
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQG-PIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLK 79 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~-~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~ 79 (843)
+++|++|+|++|++++.+|.. .+++|++|+|++|.+.+ ++...+..+++|++|+|++|++++.. +..|..++
T Consensus 246 l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~----p~~~~~l~ 318 (768)
T 3rgz_A 246 CTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV----PPFFGSCS 318 (768)
T ss_dssp CSSCCEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECC----CGGGGGCT
T ss_pred CCCCCEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCcc----chHHhcCC
Confidence 456777777777776555542 56677777777777663 33333333467777777777666432 23456666
Q ss_pred cCCEEecCCccCcccCchh-hhcCCCCCEEEcCCCcccccCCCCCCCCC-CCcEEEccCCcccccCCchhhc--ccCCcE
Q 003156 80 RLRTLDLSHNLFSGSIPQG-VAALHYLKELLLQGNQFSGPLPADIGFCP-HLTTLDLSNNLFTGQLPVSLRL--LNSMIF 155 (843)
Q Consensus 80 ~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~--l~~L~~ 155 (843)
+|++|+|++|++.+.+|.. |..+++|++|+|++|.+++..|..+..++ +|++|++++|.+++..|..+.. +++|++
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 7777777777766555543 66677777777777776666666666665 6666666666666666655554 566666
Q ss_pred EEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcc
Q 003156 156 ISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGF 234 (843)
Q Consensus 156 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l 234 (843)
|++++|++++.+|..|+++++|++|+|++|++++.+|..+..+++|+.|++++|.+.+.+|..+... +|+.|++++|++
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 6666666666666666666666666666666666666666666666666666666666666666554 566666666666
Q ss_pred eecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccc
Q 003156 235 MGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYG 314 (843)
Q Consensus 235 ~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 314 (843)
.+.+|.. +..+++|++|+|++|++++.+|..++.+++|++|++++|++.+.+|..+..+++|+.|++++|+++|
T Consensus 479 ~~~~p~~------l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 479 TGEIPSG------LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp CSCCCGG------GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred cCcCCHH------HhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 6555543 2345666666666666666666666666666666666666666666666666666666666666665
Q ss_pred cCCc----------------------------------------------------------------------cccccC
Q 003156 315 SIPQ----------------------------------------------------------------------EVCESR 324 (843)
Q Consensus 315 ~~~~----------------------------------------------------------------------~~~~l~ 324 (843)
.+|. .+..++
T Consensus 553 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~ 632 (768)
T 3rgz_A 553 TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632 (768)
T ss_dssp BCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSB
T ss_pred cCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccc
Confidence 5554 445567
Q ss_pred CCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeec
Q 003156 325 SLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVS 404 (843)
Q Consensus 325 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls 404 (843)
+|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|++|++|+.|||++|+++|.+|..++++++|+.||++
T Consensus 633 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls 712 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712 (768)
T ss_dssp CCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECC
T ss_pred cccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceecCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 003156 405 YNRLIGRLPVGGVFPTLDQSSLQGNLGICSPLLKGPCKMN 444 (843)
Q Consensus 405 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~c~~~ 444 (843)
+|+|+|.||..++|.++...+|.||+++||+|+. +|...
T Consensus 713 ~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 713 NNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp SSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred CCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 9999999999999999999999999999999986 88643
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.2e-54 Score=455.12 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=216.7
Q ss_pred hhhcCeeccccceEEEEEEEC-----CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 556 LEKAAEVGEGVFGTVYKVSFG-----TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
++..++||+|+||+||+|.+. .+++.||||++.........++|.+|+.++++++|||||+++|+|.+++..++|
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 344568999999999999974 256899999997655555668899999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCC------------CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCc
Q 003156 631 SDYAPNGSLQAKLHERLPS------------TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNP 698 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 698 (843)
||||++|+|.++|+.+.+. ...++|.+++.|+.|||+||+|||++ +||||||||+|||+++++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 9999999999999765321 24689999999999999999999998 99999999999999999999
Q ss_pred EEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHH
Q 003156 699 RISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVR 777 (843)
Q Consensus 699 kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~ 777 (843)
||+|||+++.+...+.........||+.|||||++ .+..++.++|||||||++|||+| |+.||..... ..+..
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l-~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~--- 258 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI-MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVE--- 258 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHH---
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHH-hCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHH---
Confidence 99999999987655544444667899999999988 56689999999999999999999 8999975432 11211
Q ss_pred HHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 778 VLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 778 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
.+..+.. ...+.+++.++.++|.+||+.||++||||+||+++|+++.
T Consensus 259 -~i~~~~~--------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 259 -MIRNRQV--------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp -HHHTTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -HHHcCCC--------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2222222 2345677788999999999999999999999999998753
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-54 Score=451.68 Aligned_cols=265 Identities=26% Similarity=0.440 Sum_probs=211.8
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
.++..++||+|+||+||+|++. + .||||.++.... .+..+.|.+|+.++++++|||||+++|++.+ +..++||||
T Consensus 37 ~l~l~~~iG~G~fG~Vy~~~~~--~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 37 EVMLSTRIGSGSFGTVYKGKWH--G-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp SCCEEEECCCCSSSEEEEEESS--S-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HeEEeeEEeeCCCcEEEEEEEC--C-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 3456678999999999999974 2 599999864432 2334679999999999999999999999865 567999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
|++|+|.++|+.. ...++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999865 35699999999999999999999998 99999999999999999999999999998766544
Q ss_pred cceeccccccccccCCcccccC--cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 714 KHVMSNRFQSALGYVAPELTCQ--SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 714 ~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.........||+.|||||++.. ...|+.++|||||||++|||+||+.||....... .+ ...+..+ ...|
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~----~~~~~~~----~~~p 257 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QI----IFMVGRG----YASP 257 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HH----HHHHHTT----CCCC
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HH----HHHHhcC----CCCC
Confidence 3333456789999999998743 3458999999999999999999999997543321 11 1122222 2234
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQ 838 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~ 838 (843)
.+...+.+++..+.++|.+||+.||++||||.||+++|+.++.++|+
T Consensus 258 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk 304 (307)
T 3omv_A 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence 44455667778899999999999999999999999999999988875
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.2e-54 Score=454.38 Aligned_cols=269 Identities=22% Similarity=0.351 Sum_probs=221.0
Q ss_pred hhhhhcCeeccccceEEEEEEEC-----CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFG-----TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
+.+...+.||+|+||+||+|++. .+++.||||++.... ....++|.+|++++++++|||||+++|+|.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 45666779999999999999984 257899999996543 334578999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcC---------CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcE
Q 003156 629 LVSDYAPNGSLQAKLHERL---------PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPR 699 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 699 (843)
+|||||++|+|.++|+... .....++|.+++.|+.|+|+||+|||++ +||||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 9999999999999998642 1245799999999999999999999998 999999999999999999999
Q ss_pred EeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHH
Q 003156 700 ISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRV 778 (843)
Q Consensus 700 l~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~ 778 (843)
|+|||+|+.....+.........||+.|||||++ .+..++.++|||||||++|||+| |+.||..... ..+..
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~-~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~---- 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI-MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIE---- 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHH----
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHH-cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH----
Confidence 9999999987665555454556799999999998 56689999999999999999999 8999975432 11111
Q ss_pred HHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 003156 779 LLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQRME 841 (843)
Q Consensus 779 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~~~~ 841 (843)
.+..+.. ...|..++.++.++|.+||+.||++||||+||++.|+.+.+..|.-.+
T Consensus 242 ~i~~~~~--------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~~ld 296 (299)
T 4asz_A 242 CITQGRV--------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLD 296 (299)
T ss_dssp HHHHTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCCCSC
T ss_pred HHHcCCC--------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCcccc
Confidence 2222222 223566777899999999999999999999999999998776665443
No 5
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.2e-53 Score=455.08 Aligned_cols=267 Identities=24% Similarity=0.350 Sum_probs=209.7
Q ss_pred hhhhhcCeeccccceEEEEEEEC-----CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFG-----TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
+.+...++||+|+||+||+|++. .+++.||||++.... ....++|.+|++++++++|||||+++|+|.+++..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 34455678999999999999975 257899999996443 334578999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcCC-----------CCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC
Q 003156 629 LVSDYAPNGSLQAKLHERLP-----------STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN 697 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 697 (843)
+|||||++|+|.++++.... ...+++|.+++.|+.|+|+||+|||+. +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 99999999999999987532 134699999999999999999999998 9999999999999999999
Q ss_pred cEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHH
Q 003156 698 PRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHV 776 (843)
Q Consensus 698 ~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~ 776 (843)
+||+|||+++.+...+.........||+.|||||++ .+..++.++|||||||++|||+| |+.||...... .+ +
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~-~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~---~ 270 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EA---I 270 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHH-TTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HH---H
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhh-cCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HH---H
Confidence 999999999977655444444567899999999988 66689999999999999999999 89999754321 11 1
Q ss_pred HHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 003156 777 RVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQR 839 (843)
Q Consensus 777 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~~ 839 (843)
. .+..+.. ...|..++.++.++|.+||+.||++||||+||+++|+.+.+..|..
T Consensus 271 ~-~i~~g~~--------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp~~ 324 (329)
T 4aoj_A 271 D-CITQGRE--------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVY 324 (329)
T ss_dssp H-HHHHTCC--------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC--
T ss_pred H-HHHcCCC--------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCccc
Confidence 1 1222221 1235566778999999999999999999999999999997765543
No 6
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.9e-52 Score=499.52 Aligned_cols=423 Identities=37% Similarity=0.562 Sum_probs=331.8
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCC----------
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFA---------- 70 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~---------- 70 (843)
+++|++|+|++|++++.+|. |.++++|++|+|++|.+.+..+..|..+++|++|+|++|++.+..+..
T Consensus 199 l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L 276 (768)
T 3rgz_A 199 CVNLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSL 276 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEEC
T ss_pred CCcCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEEC
Confidence 46788888888888765654 778888888888888888777777888888888888888776533211
Q ss_pred --------cCccccC-CccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCC-CCCCCCCcEEEccCCccc
Q 003156 71 --------SGYGIWS-LKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPAD-IGFCPHLTTLDLSNNLFT 140 (843)
Q Consensus 71 --------~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~ 140 (843)
.+..+.. +++|++|+|++|++.+..|..|..+++|++|+|++|.+++.+|.. +..+++|++|+|++|.++
T Consensus 277 ~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~ 356 (768)
T 3rgz_A 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 356 (768)
T ss_dssp CSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEE
T ss_pred cCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccC
Confidence 1112222 255666666666665556666666666666666666665555543 566666666666666666
Q ss_pred ccCCchhhccc-CCcEEEeecCcccccCCCCccC--CCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCc
Q 003156 141 GQLPVSLRLLN-SMIFISVSNNTLTGDIPHWIGN--ISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPE 217 (843)
Q Consensus 141 ~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 217 (843)
+..|..+..++ +|+.|++++|++++.+|..+.. +++|++|+|++|.+++.+|..+.++++|+.|++++|.+++.+|.
T Consensus 357 ~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 436 (768)
T 3rgz_A 357 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436 (768)
T ss_dssp ECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCG
T ss_pred ccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccH
Confidence 66666666665 6666666666666666665555 66777777777777777788888888888888888888877887
Q ss_pred hhhcc-CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCc
Q 003156 218 GLFDL-GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPEL 296 (843)
Q Consensus 218 ~~~~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 296 (843)
.+..+ +|+.|++++|.+.+.+|.. +..+++|++|+|++|++++.+|..+..+++|++|++++|++++.+|..+
T Consensus 437 ~l~~l~~L~~L~L~~n~l~~~~p~~------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 510 (768)
T 3rgz_A 437 SLGSLSKLRDLKLWLNMLEGEIPQE------LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGG------GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred HHhcCCCCCEEECCCCcccCcCCHH------HcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHH
Confidence 77765 6888888888887766653 3457899999999999999999999999999999999999999999999
Q ss_pred cccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhc-------------------------------
Q 003156 297 GYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIR------------------------------- 345 (843)
Q Consensus 297 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------------------------------- 345 (843)
+.+++|++|+|++|++++.+|..++.+++|+.|++++|.++|.+|..+.
T Consensus 511 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (768)
T 3rgz_A 511 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGA 590 (768)
T ss_dssp GGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSS
T ss_pred hcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999887776543
Q ss_pred ---------------------------------------ccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccc
Q 003156 346 ---------------------------------------NCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSG 386 (843)
Q Consensus 346 ---------------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 386 (843)
++++|+.|+|++|+++|.+|..|+++++|+.|+|++|+++|
T Consensus 591 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 670 (768)
T 3rgz_A 591 GNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670 (768)
T ss_dssp EEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred ccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCC
Confidence 35779999999999999999999999999999999999999
Q ss_pred cCCcchhcccccceEeeccccceecCCCC-CCCCCCCCCCcCCCCC
Q 003156 387 EIPQELGKLASLLAVNVSYNRLIGRLPVG-GVFPTLDQSSLQGNLG 431 (843)
Q Consensus 387 ~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~ 431 (843)
.+|..++++++|+.|||++|+++|.+|.. +.+..+...++.+|+.
T Consensus 671 ~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred CCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999999999999953 5567788888888864
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.2e-52 Score=446.67 Aligned_cols=266 Identities=25% Similarity=0.330 Sum_probs=219.3
Q ss_pred hhhhhhcCeeccccceEEEEEEECCC-----CeEEEEEEeecCCcccChHHHHHHHHHHHhccC-CCccceeeEEEcC-C
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQ-----GRMLAVKKLVTSDIIQYPEDFEREVRVLGKARH-PNLISLEGYYWTP-Q 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~-~ 625 (843)
.+.|+..+.||+|+||+||+|.+... ++.||||++.........+.|.+|++++++++| ||||+++|+|.++ +
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 45677888999999999999998543 468999999765544445679999999999965 8999999999765 4
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCC------------CCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLP------------STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD 693 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 693 (843)
..++|||||++|+|.++|+.... ....++|.+++.++.|||+||+|||++ +||||||||+|||++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 219 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 219 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeC
Confidence 68999999999999999986421 134589999999999999999999999 999999999999999
Q ss_pred CCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhH
Q 003156 694 DNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVIL 772 (843)
Q Consensus 694 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l 772 (843)
+++.+||+|||+|+.+.............||+.|||||++ .+..|+.++|||||||++|||+| |+.||........ +
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l-~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-~ 297 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-F 297 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-H
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHH-hcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-H
Confidence 9999999999999987665555555667899999999998 56689999999999999999998 9999976543322 1
Q ss_pred HHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 773 SEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 773 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
...+..+... ..|..++.++.++|.+||+.||++||||.|++++|+.+.+.
T Consensus 298 ----~~~i~~g~~~--------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 298 ----CRRLKEGTRM--------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp ----HHHHHHTCCC--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHcCCCC--------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 1222333221 23455667899999999999999999999999999987543
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.1e-51 Score=437.05 Aligned_cols=253 Identities=23% Similarity=0.376 Sum_probs=205.1
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||+||+|++..+|+.||||++...... ...+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4578888999999999999999989999999999755432 234678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
||++|+|.++|.... ...+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999998652 34578899999999999999999999 9999999999999999999999999999876532
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
.. ......||+.|||||++ .+..|+.++||||+||++|||+||+.||..... . +....... +.
T Consensus 179 ~~--~~~~~~GT~~YmAPE~l-~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~----~~~~~i~~-~~-------- 241 (350)
T 4b9d_A 179 VE--LARACIGTPYYLSPEIC-ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-K----NLVLKIIS-GS-------- 241 (350)
T ss_dssp HH--HHHHHHSCCTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-H----HHHHHHHH-TC--------
T ss_pred cc--cccccCCCccccCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-H----HHHHHHHc-CC--------
Confidence 21 22456799999999998 566799999999999999999999999965321 1 11222222 11
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.+..+...+.++.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112234455678899999999999999999999875
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-50 Score=430.86 Aligned_cols=253 Identities=21% Similarity=0.357 Sum_probs=211.4
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.+.|+..++||+|+||+||+|++..+|+.||||++.... ....+.+.+|+.++++++|||||++++++.+++..||||
T Consensus 72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 4456777889999999999999999899999999996543 234567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
|||++|+|.+++... .+++.++..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 151 Ey~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 151 EFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp CCCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred eCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999999763 489999999999999999999999 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... ......||+.|||||++ ....|+.++||||+||++|||++|+.||..... ... ... +..+ ..+
T Consensus 223 ~~~--~~~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~---~~~-i~~~-----~~~ 288 (346)
T 4fih_A 223 EVP--RRKSLVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKA---MKM-IRDN-----LPP 288 (346)
T ss_dssp SSC--CBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHH---HHH-HHHS-----SCC
T ss_pred CCC--cccccccCcCcCCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHH---HHH-HHcC-----CCC
Confidence 322 22567899999999988 566799999999999999999999999964321 111 111 1111 111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. ..+.....++.+++.+||+.||++|||++|++++
T Consensus 289 ~~-~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 289 RL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CC-SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC-CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11 1234556678899999999999999999999986
No 10
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5e-51 Score=432.26 Aligned_cols=264 Identities=26% Similarity=0.358 Sum_probs=202.1
Q ss_pred hhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHH--HHHHHHHHhccCCCccceeeEEEcCC----eeEE
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDF--EREVRVLGKARHPNLISLEGYYWTPQ----LKLL 629 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~--~~E~~~l~~l~h~niv~l~g~~~~~~----~~~l 629 (843)
+...+.||+|+||+||+|++ +|+.||||++.... .+.+ ..|+..+.+++|||||+++|+|.+++ ..+|
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 44567899999999999998 58999999985432 2333 34566667889999999999998654 5789
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhc-----CCCCeeecCCCCCCEEEcCCCCcEEeecc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHS-----FRPPIIHYNLKPSNILLDDNYNPRISDFG 704 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 704 (843)
|||||++|+|.++++.. .++|..+.+++.|+|+||+|||++ ..++||||||||+|||+++++++||+|||
T Consensus 79 V~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 99999999999999864 589999999999999999999976 25689999999999999999999999999
Q ss_pred Ccccccccccce--eccccccccccCCcccccCc-----CCCCCchhHHHHHHHHHHHHhCCCCCcCCCCc---------
Q 003156 705 LARLLTRLDKHV--MSNRFQSALGYVAPELTCQS-----LRVNEKCDIYGFGVLILELVTGRRPVEYGEDN--------- 768 (843)
Q Consensus 705 l~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~-----~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~--------- 768 (843)
+|+......... ......||+.|||||++... ..++.++|||||||++|||+||+.||......
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 998775433322 22345799999999988432 14678999999999999999998876432211
Q ss_pred -hhhHHHHHHHHHhhCCcccccCCCCCC--CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 769 -VVILSEHVRVLLEEGNVLDCVDPSMGD--YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 769 -~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
...... +...+.. ...+|.++. ...++...+.++|.+||+.||++||||.||++.|+++.+.
T Consensus 234 ~~~~~~~-~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 234 SDPSVEE-MRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp SSCCHHH-HHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccchHHH-HHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 111111 1111111 223344433 2335667889999999999999999999999999988643
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-50 Score=421.21 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=200.1
Q ss_pred hhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEc----CCeeEEEE
Q 003156 557 EKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWT----PQLKLLVS 631 (843)
Q Consensus 557 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~lV~ 631 (843)
+..++||+|+||+||+|.+..+++.||+|++...... ...+.|.+|++++++++|||||++++++.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4455799999999999999989999999999755432 234678999999999999999999999865 34578999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc-CCCCcEEeeccCccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD-DNYNPRISDFGLARLLT 710 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~ 710 (843)
|||++|+|.++++.. ..+++..+..++.||+.||+|||++ .++||||||||+|||++ .++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 999999999999875 4689999999999999999999987 22499999999999998 47999999999998543
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
.. ......||+.|||||++. + .|+.++|||||||++|||+||+.||....... .+.. .+..+...
T Consensus 184 ~~----~~~~~~GTp~YmAPE~~~-~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~----~i~~~~~~---- 248 (290)
T 3fpq_A 184 AS----FAKAVIGTPEFMAPEMYE-E-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYR----RVTSGVKP---- 248 (290)
T ss_dssp TT----SBEESCSSCCCCCGGGGG-T-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHH----HHTTTCCC----
T ss_pred CC----ccCCcccCccccCHHHcC-C-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHH----HHHcCCCC----
Confidence 21 224568999999999873 3 58999999999999999999999996543221 1111 11111110
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..++.....++.+++.+||+.||++|||++|++++
T Consensus 249 ---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 249 ---ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01223334568899999999999999999999875
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-50 Score=427.48 Aligned_cols=253 Identities=20% Similarity=0.222 Sum_probs=206.7
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..++||+|+||+||+|++..+|+.||||++..... +.+|+.++++++|||||++++++.+++..||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 345667789999999999999998999999999965432 24799999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC-CcEEeeccCccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY-NPRISDFGLARLLTRL 712 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~ 712 (843)
|++|+|.++++.. ..+++..+..++.|++.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 132 ~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 9999999999875 4699999999999999999999998 999999999999999887 6999999999877543
Q ss_pred ccc---eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 713 DKH---VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 713 ~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
... .......||+.|||||++ .+..|+.++||||+||++|||+||+.||....... .+.... ...
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~-~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~----~~~------ 272 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVV-MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIA----SEP------ 272 (336)
T ss_dssp ---------CCCCCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHH----HSC------
T ss_pred CcccceecCCccccCccccCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHH----cCC------
Confidence 221 122446799999999998 55679999999999999999999999997543222 121111 111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhc
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVI 832 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~ 832 (843)
+.....+...+..+.+++.+||+.||++|||+.|++++|...
T Consensus 273 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 273 -PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp -CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 111123455667789999999999999999999999988654
No 13
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.8e-49 Score=461.14 Aligned_cols=426 Identities=20% Similarity=0.191 Sum_probs=286.0
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
+++++|+|++|+|+ .+++..|.++++|++|+|++|+|.++.+..|.++++|++|+|++|++++..+ ..|..+++|
T Consensus 33 ~~l~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~----~~~~~l~~L 107 (606)
T 3t6q_A 33 NSTECLEFSFNVLP-TIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAE----TALSGPKAL 107 (606)
T ss_dssp TTCCEEECTTCCCS-EECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECT----TTTSSCTTC
T ss_pred CcCcEEEccCCccC-cCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccCh----hhhcccccc
Confidence 35889999999998 6666778999999999999999998888889999999999999998886433 357788899
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCc--EEEee
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMI--FISVS 159 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~L~ 159 (843)
++|+|++|++++..+..|..+++|++|+|++|.+++.....+..+++|++|++++|.+++..+..|..+++|+ .|+++
T Consensus 108 ~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~ 187 (606)
T 3t6q_A 108 KHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLN 187 (606)
T ss_dssp CEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECT
T ss_pred cEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecC
Confidence 9999999998876677788888999999999988865544555688888888888888877777777777766 66666
Q ss_pred cCcccccC------------------------------------------------------------------------
Q 003156 160 NNTLTGDI------------------------------------------------------------------------ 167 (843)
Q Consensus 160 ~N~l~~~~------------------------------------------------------------------------ 167 (843)
+|++.+..
T Consensus 188 ~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~ 267 (606)
T 3t6q_A 188 GNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFF 267 (606)
T ss_dssp TCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCS
T ss_pred CCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccC
Confidence 66555433
Q ss_pred ---CCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcceecCCCCCC
Q 003156 168 ---PHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFMGSIPPGSS 243 (843)
Q Consensus 168 ---p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~ 243 (843)
+..|+++++|++|+|++|+++ .+|..+..+++|++|++++|.+.+..|..+... +|+.|++++|.+.+.+|....
T Consensus 268 ~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 346 (606)
T 3t6q_A 268 NISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCL 346 (606)
T ss_dssp SCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTT
T ss_pred ccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhh
Confidence 334666777888888888777 567777778888888888888776556555554 577777777776655554321
Q ss_pred C---------------------CCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCC-Ccccccc
Q 003156 244 S---------------------SSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPP-ELGYFHS 301 (843)
Q Consensus 244 ~---------------------~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~ 301 (843)
. ...+..+++|++|++++|++.+..|..+..+++|++|++++|.+++..+. .+..+++
T Consensus 347 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 426 (606)
T 3t6q_A 347 ENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHL 426 (606)
T ss_dssp TTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTT
T ss_pred hccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCccc
Confidence 1 01122344555555555555555555555555555555555555544332 2555555
Q ss_pred ceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCC---chhhhcccCCCcEEecccccccccCCccccCCCCCCEEE
Q 003156 302 LIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGP---IPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILK 378 (843)
Q Consensus 302 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 378 (843)
|++|++++|.+++..|..+..+++|+.|++++|.+++. .+..+..+++|+.|+|++|++++..|..|+++++|+.|+
T Consensus 427 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 506 (606)
T 3t6q_A 427 LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVD 506 (606)
T ss_dssp CCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEE
Confidence 55555555555555555555556666666666655541 223455566666666666666655566666666666666
Q ss_pred ccCCcccccCCcchhcccccceEeeccccceecCCCC-CCCCCCCCCCcCCCCCCCC
Q 003156 379 LEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVG-GVFPTLDQSSLQGNLGICS 434 (843)
Q Consensus 379 L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~ 434 (843)
|++|++++..|..+.+++.| .|++++|++++.+|.. +.++.+....+.||++.|.
T Consensus 507 Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 507 LSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp CCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 66666666666666666666 6666666666555531 3344556666667766653
No 14
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.2e-50 Score=422.03 Aligned_cols=251 Identities=25% Similarity=0.316 Sum_probs=211.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC--cccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD--IIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||+||+|++..+|+.||||.+.+.. .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 34778889999999999999999999999999996542 1234578999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 999999999999875 4689999999999999999999999 999999999999999999999999999998765
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
...........||+.|||||++ .+..|+.++||||+||++|||+||+.||.... ...+ ...... +..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~---~~~i~~-~~~------ 251 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLI---FAKIIK-LEY------ 251 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHH-HHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHH---HHHHHH-TCC------
T ss_pred CCCcccccCcccCcccCCHHHH-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHH---HHHHHc-CCC------
Confidence 4444444667899999999998 56678999999999999999999999996532 1111 111111 111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQ 827 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~ 827 (843)
.++.....++.+++.+|++.||++|||++|++.
T Consensus 252 ---~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 252 ---DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp ---CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred ---CCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 234445567889999999999999999998643
No 15
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=432.24 Aligned_cols=254 Identities=22% Similarity=0.356 Sum_probs=212.4
Q ss_pred ChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 551 DPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 551 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
++.+.|+..++||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.++++++|||||++++++.+++..|||
T Consensus 148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 45667888889999999999999999999999999996543 33456789999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
||||++|+|.++++.. .+++.++..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.
T Consensus 227 mEy~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp EECCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred EeCCCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 9999999999999763 489999999999999999999999 99999999999999999999999999998765
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
.... ......||+.|||||++ .+..|+.++||||+||++|||++|+.||..... ... ... +..+. .
T Consensus 299 ~~~~--~~~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~---~~~-i~~~~-----~ 364 (423)
T 4fie_A 299 KEVP--RRKSLVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKA---MKM-IRDNL-----P 364 (423)
T ss_dssp SSCC--CBCCCEECTTTCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHH---HHH-HHHSC-----C
T ss_pred CCCc--cccccccCcCcCCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHH---HHH-HHcCC-----C
Confidence 4222 22567899999999988 566799999999999999999999999964321 111 111 11111 1
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+.+ ........++.+++.+||..||++|||+.|++++
T Consensus 365 ~~~-~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 365 PRL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CCC-SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCC-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111 1233445678899999999999999999999986
No 16
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-49 Score=410.33 Aligned_cols=248 Identities=25% Similarity=0.364 Sum_probs=194.6
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.|+..+.||+|+||+||+|++..+|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 46778899999999999999998999999999965432 2345679999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+ +|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+...+.
T Consensus 94 y~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 94 YA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp CC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred CC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99 68999999875 4699999999999999999999999 9999999999999999999999999999876542
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
. ......||+.|||||++.+...++.++||||+||++|||+||+.||.... ...+ .+.. ..+..
T Consensus 166 ~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--~~~~---~~~i-~~~~~------- 229 (275)
T 3hyh_A 166 N---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVL---FKNI-SNGVY------- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHH---HHHH-HHTCC-------
T ss_pred C---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--HHHH---HHHH-HcCCC-------
Confidence 2 22456899999999998555455789999999999999999999996432 1111 1211 11111
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.++.....++.+++.+|++.||++|||++|++++
T Consensus 230 --~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 --TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred --CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1234455678899999999999999999999986
No 17
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-48 Score=474.83 Aligned_cols=418 Identities=24% Similarity=0.213 Sum_probs=282.0
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCcc-ccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNI-LQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~-i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
+++++|||++|.|+ .+++..|.++++|++|+|++|. +..+.+..|.++++|++|+|++|.|++.. +..|..+++
T Consensus 24 ~~l~~LdLs~N~i~-~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~----p~~~~~l~~ 98 (844)
T 3j0a_A 24 NTTERLLLSFNYIR-TVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLH----PDAFQGLFH 98 (844)
T ss_dssp TTCCEEEEESCCCC-EECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEEC----TTSSCSCSS
T ss_pred CCcCEEECCCCcCC-ccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccC----HhHccCCcc
Confidence 57889999999988 5555668889999999998884 45566788888999999999999888543 346788888
Q ss_pred CCEEecCCccCcccCchh--hhcCCCCCEEEcCCCcccccCC-CCCCCCCCCcEEEccCCcccccCCchhhcc--cCCcE
Q 003156 81 LRTLDLSHNLFSGSIPQG--VAALHYLKELLLQGNQFSGPLP-ADIGFCPHLTTLDLSNNLFTGQLPVSLRLL--NSMIF 155 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~ 155 (843)
|++|+|++|.+.+..+.. |..+++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..|..+ ++|+.
T Consensus 99 L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~ 178 (844)
T 3j0a_A 99 LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF 178 (844)
T ss_dssp CCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCC
T ss_pred cCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccce
Confidence 999999999888655554 8888899999999998886654 468888999999999998888778877776 66777
Q ss_pred EEeecCcccccCCCCccCCCC------ccEEEcccC--------------------------------------------
Q 003156 156 ISVSNNTLTGDIPHWIGNIST------LEFLDFSNN-------------------------------------------- 185 (843)
Q Consensus 156 L~L~~N~l~~~~p~~~~~l~~------L~~L~L~~N-------------------------------------------- 185 (843)
|++++|.+.+..|..++.+++ |+.|+|++|
T Consensus 179 L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~ 258 (844)
T 3j0a_A 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQN 258 (844)
T ss_dssp CEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGT
T ss_pred EECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChh
Confidence 777777666555544444333 445555444
Q ss_pred ------------------CcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcceecCCCCCCCCC
Q 003156 186 ------------------HLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFMGSIPPGSSSSS 246 (843)
Q Consensus 186 ------------------~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~~~~ 246 (843)
.+++..+..|..+++|+.|+|++|.+++..|..+..+ +|+.|++++|.+.+..|..
T Consensus 259 ~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~----- 333 (844)
T 3j0a_A 259 TFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSN----- 333 (844)
T ss_dssp TTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCS-----
T ss_pred hhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHH-----
Confidence 4444444445555555555555555554444444333 4555555555554332222
Q ss_pred cccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCC------------------C--------------
Q 003156 247 SSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIP------------------P-------------- 294 (843)
Q Consensus 247 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~------------------~-------------- 294 (843)
+..+++|+.|+|++|.+.+..+..|..+++|++|++++|.++++.. .
T Consensus 334 -~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 334 -FYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENR 412 (844)
T ss_dssp -CSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCC
T ss_pred -hcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCc
Confidence 1234555555555555554444455555555555555555543210 0
Q ss_pred --------CccccccceEEEccCCcccccCCc-cccccCCCcEEEcCCCCCC-----CCchhhhcccCCCcEEecccccc
Q 003156 295 --------ELGYFHSLIHLDLRNNALYGSIPQ-EVCESRSLGILQLDGNSLT-----GPIPQVIRNCTSLYLLSLSHNHL 360 (843)
Q Consensus 295 --------~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l 360 (843)
.+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 011233444444444444422211 2333455555555555554 33345678889999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecCCCCCCCCCCCCCCcCCCCCCCC
Q 003156 361 SGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGICS 434 (843)
Q Consensus 361 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~ 434 (843)
++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|. .+..+....+.||++.|.
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKFICE 562 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECCCCS
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcCEEEecCCCcccc
Confidence 988888899999999999999999987777776 7899999999999999884 577888889999999984
No 18
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3e-47 Score=447.64 Aligned_cols=425 Identities=21% Similarity=0.176 Sum_probs=316.9
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
+++++|+|++|+++ .++...|.++++|++|+|++|.|.++.+..|.++++|++|+|++|.+++.. +..|.++++|
T Consensus 32 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~----p~~~~~l~~L 106 (606)
T 3vq2_A 32 SSTKNIDLSFNPLK-ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS----PGSFSGLTSL 106 (606)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCC----TTSSTTCTTC
T ss_pred CCcCEEECCCCCcC-EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccC----hhhcCCcccC
Confidence 46889999999998 677777889999999999999999888888999999999999999888543 3467888999
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccc-cCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCc----EE
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSG-PLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMI----FI 156 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L 156 (843)
++|+|++|++.+..+..|+.+++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..|..+.+|+ .|
T Consensus 107 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L 186 (606)
T 3vq2_A 107 ENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSL 186 (606)
T ss_dssp CEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEE
T ss_pred CEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhcccccccee
Confidence 999999999887777788899999999999998875 4588888899999999999988887777776666554 56
Q ss_pred EeecCcccccCCCCcc----------------------------------------------------------------
Q 003156 157 SVSNNTLTGDIPHWIG---------------------------------------------------------------- 172 (843)
Q Consensus 157 ~L~~N~l~~~~p~~~~---------------------------------------------------------------- 172 (843)
++++|++++..+..+.
T Consensus 187 ~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l 266 (606)
T 3vq2_A 187 DMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEF 266 (606)
T ss_dssp ECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEE
T ss_pred eccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhhe
Confidence 6666666544333332
Q ss_pred ----------------CCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCccee
Q 003156 173 ----------------NISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMG 236 (843)
Q Consensus 173 ----------------~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~ 236 (843)
.+++|+.|++++|.++ .+| .+..+++|+.|++++|.+ +.+|.. ...+|+.|++++|...+
T Consensus 267 ~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~~-~l~~L~~L~l~~n~~~~ 342 (606)
T 3vq2_A 267 RLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPTL-DLPFLKSLTLTMNKGSI 342 (606)
T ss_dssp EECCCTTCCGGGGSCGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCCC-CCSSCCEEEEESCSSCE
T ss_pred eccccccccccccccccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccccC-CCCccceeeccCCcCcc
Confidence 3344444444444443 233 566666777777777776 355532 21234444444443322
Q ss_pred cCCCCCC------------------CCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCC-CCcc
Q 003156 237 SIPPGSS------------------SSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIP-PELG 297 (843)
Q Consensus 237 ~~p~~~~------------------~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~ 297 (843)
.++.... .......+++|++|++++|.+++ +|..+..+++|++|++++|++.+..+ ..+.
T Consensus 343 ~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 343 SFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp ECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred chhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhh
Confidence 2211000 00112345677777777777763 55777888888888888888887766 6788
Q ss_pred ccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCC-CchhhhcccCCCcEEecccccccccCCccccCCCCCCE
Q 003156 298 YFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTG-PIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKI 376 (843)
Q Consensus 298 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 376 (843)
.+++|++|++++|++++..|..+..+++|++|++++|.+++ .+|..|+++++|+.|+|++|++++..|..|.++++|++
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 501 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 501 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCE
Confidence 88888899999888888888888888999999999998887 47888888999999999999998888888899999999
Q ss_pred EEccCCcccccCCcchhcccccceEeeccccceecCCCCCCCC-CCCCCCcCCCCCCCCCC
Q 003156 377 LKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVGGVFP-TLDQSSLQGNLGICSPL 436 (843)
Q Consensus 377 L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~-~~~~~~~~~n~~~c~~~ 436 (843)
|+|++|++++.+|..+.++++|+.|++++|+++...+....++ .+....+.+|++.|.-+
T Consensus 502 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 502 LNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred EECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999998888899999999999999999885444334454 47778888999888644
No 19
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.7e-49 Score=411.13 Aligned_cols=250 Identities=24% Similarity=0.344 Sum_probs=198.5
Q ss_pred hhhhhcCeeccccceEEEEEEEC---CCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFG---TQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
+.|+..+.||+|+||+||+|+.. .+++.||||.+...... .....+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 45788889999999999999884 35789999998654321 223468899999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
|||||++|+|.+++... ..+++.++..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 99999999999999875 4689999999999999999999999 9999999999999999999999999999865
Q ss_pred cccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
..... ......||+.|||||++ .+..++.++||||+||++|||+||+.||..... .. ....... +.
T Consensus 177 ~~~~~--~~~~~~GT~~YmAPE~~-~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~----~~~~i~~-~~----- 242 (304)
T 3ubd_A 177 IDHEK--KAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KE----TMTMILK-AK----- 242 (304)
T ss_dssp ----C--CCCSCCCCGGGCCHHHH-HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HH----HHHHHHH-CC-----
T ss_pred cCCCc--cccccccCcccCCHHHh-ccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-HH----HHHHHHc-CC-----
Confidence 43222 22457899999999998 556789999999999999999999999965321 11 1111111 11
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPS-----MAEVVQI 828 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs-----~~evl~~ 828 (843)
..++...+.++.+++.+||+.||++||| ++|++++
T Consensus 243 ----~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 243 ----LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ----CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1234455667889999999999999998 4677764
No 20
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.4e-48 Score=411.11 Aligned_cols=253 Identities=18% Similarity=0.270 Sum_probs=190.4
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCC---------
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ--------- 625 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--------- 625 (843)
.|+..+.||+|+||+||+|++..+|+.||||++.........+.+.+|++++++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 46677899999999999999998999999999976554444567899999999999999999999987544
Q ss_pred ---eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEee
Q 003156 626 ---LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISD 702 (843)
Q Consensus 626 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 702 (843)
..|+|||||++|+|.+++..... ....++..++.++.|+++||+|||++ +||||||||+|||++.++.+||+|
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999987532 23356677889999999999999999 999999999999999999999999
Q ss_pred ccCcccccccccce----------eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhH
Q 003156 703 FGLARLLTRLDKHV----------MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVIL 772 (843)
Q Consensus 703 fgl~~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l 772 (843)
||+|+.+....... ......||+.|||||++ .+..|+.++|||||||++|||++ ||.... ..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~-~~~~y~~~~DiwSlGvilyell~---Pf~~~~---~~- 233 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI-HGNSYSHKVDIFSLGLILFELLY---PFSTQM---ER- 233 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHH-TTCCCCTHHHHHHHHHHHHHHHS---CCSSHH---HH-
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHH-cCCCCCCHHHHHHHHHHHHHHcc---CCCCcc---HH-
Confidence 99998775432211 12345799999999998 56679999999999999999996 774311 11
Q ss_pred HHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 773 SEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 773 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...+.. +... ..+.........+.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~-~~~~--------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 VRTLTD-VRNL--------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHH-HHTT--------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHH-HhcC--------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111 1111 1111122333456789999999999999999999985
No 21
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-46 Score=446.60 Aligned_cols=185 Identities=23% Similarity=0.261 Sum_probs=124.7
Q ss_pred ccCccCEEeCCCCccceeCC-ccccCCCCCcEEEcCCCcccC--------------------------CCCCCccccccc
Q 003156 250 LFQTLRILDLSSNNLVGDIP-AEMGLFANLRYLNLSSNHLRS--------------------------RIPPELGYFHSL 302 (843)
Q Consensus 250 ~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~--------------------------~~~~~~~~l~~L 302 (843)
.+++|+.|+|++|.+.+.+| ..+..+++|++|++++|++.+ ..|..|..+++|
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 34566666666666655443 445555555555555555543 345556666677
Q ss_pred eEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCch--------hhhcccCCCcEEecccccccccCCccccCCCCC
Q 003156 303 IHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIP--------QVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKL 374 (843)
Q Consensus 303 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 374 (843)
+.|++++|++++..+..|..+++|+.|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.++++|
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 777777777776656667777777777777777764321 236677777777777777774444467788888
Q ss_pred CEEEccCCcccccCCcchhcccccceEeeccccceecCCCC-C-CCCCCCCCCcCCCCCCCC
Q 003156 375 KILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVG-G-VFPTLDQSSLQGNLGICS 434 (843)
Q Consensus 375 ~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~-~~~~~~~~~~~~n~~~c~ 434 (843)
+.|+|++|+|++..+..|..+++|+.|++++|++++.+|.. + .++++....+.||++.|.
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 88888888888666666778888888888888888766632 1 466778888899999886
No 22
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.3e-46 Score=437.05 Aligned_cols=405 Identities=22% Similarity=0.207 Sum_probs=277.9
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCC-----------
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDF----------- 69 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~----------- 69 (843)
+++|++|+|++|+++ .+++.+|.++++|++|+|++|.+.++.+..|.++++|++|+|++|++++..+.
T Consensus 56 l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L 134 (606)
T 3t6q_A 56 LINLTFLDLTRCQIY-WIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESL 134 (606)
T ss_dssp CTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEE
T ss_pred CccceEEECCCCccc-eeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEE
Confidence 356666777776666 44445566666666666666666666666666666666666666666542110
Q ss_pred ---------CcCccccCCccCCEEecCCccCcccCchhhhcCCCCC--EEEcCCCcccccCCCC----------------
Q 003156 70 ---------ASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLK--ELLLQGNQFSGPLPAD---------------- 122 (843)
Q Consensus 70 ---------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~n~l~~~~~~~---------------- 122 (843)
.....+..+++|++|++++|.+++..+..|..+++|+ +|++++|.+++..|..
T Consensus 135 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~ 214 (606)
T 3t6q_A 135 YLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQN 214 (606)
T ss_dssp ECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSC
T ss_pred ECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchh
Confidence 0111233356666666666666655556666666666 5666666555444333
Q ss_pred -----------------------------------------------------------CCCCCCCcEEEccCCcccccC
Q 003156 123 -----------------------------------------------------------IGFCPHLTTLDLSNNLFTGQL 143 (843)
Q Consensus 123 -----------------------------------------------------------~~~l~~L~~L~L~~N~l~~~~ 143 (843)
|..+++|++|++++|.++ .+
T Consensus 215 ~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~l 293 (606)
T 3t6q_A 215 LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-EL 293 (606)
T ss_dssp HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CC
T ss_pred HHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CC
Confidence 333344444444444444 33
Q ss_pred CchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCC-CCCCCCCCcEEEecCCcCCCCC--Cchhh
Q 003156 144 PVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPS-SLFNCKKLSVIRLRGNSLNGNI--PEGLF 220 (843)
Q Consensus 144 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~ 220 (843)
|..+..+++|++|++++|++.+..|..+.++++|++|++++|.+.+.++. .+..+++|+.|++++|.+.+.. +..+.
T Consensus 294 p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 373 (606)
T 3t6q_A 294 PSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373 (606)
T ss_dssp CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTT
T ss_pred ChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcc
Confidence 33444444444444444444444444444444444444444444432222 2455555555555555554332 33333
Q ss_pred cc-CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCcc-ccCCCCCcEEEcCCCcccCCCCCCccc
Q 003156 221 DL-GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAE-MGLFANLRYLNLSSNHLRSRIPPELGY 298 (843)
Q Consensus 221 ~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~ 298 (843)
.. +|+.|++++|++.+..|.. +..+++|+.|++++|++.+..+.. +..+++|++|++++|.+.+..|..+..
T Consensus 374 ~l~~L~~L~l~~n~l~~~~~~~------~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 447 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLKTEA------FKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG 447 (606)
T ss_dssp TCTTCCEEECCSCSCEEECTTT------TTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT
T ss_pred cCCCCCEEECCCCcCCcCCHHH------hcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC
Confidence 33 4666666666666544433 345789999999999999776554 899999999999999999999999999
Q ss_pred cccceEEEccCCccccc---CCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCC
Q 003156 299 FHSLIHLDLRNNALYGS---IPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLK 375 (843)
Q Consensus 299 l~~L~~L~L~~n~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 375 (843)
+++|++|++++|++++. .+..+..+++|+.|++++|.+++..|..|.++++|+.|+|++|++++..|..+.++++|
T Consensus 448 l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L- 526 (606)
T 3t6q_A 448 LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI- 526 (606)
T ss_dssp CTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-
T ss_pred CCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-
Confidence 99999999999999863 33678999999999999999999889999999999999999999999999999999999
Q ss_pred EEEccCCcccccCCcchhcccccceEeeccccceecCCC
Q 003156 376 ILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPV 414 (843)
Q Consensus 376 ~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 414 (843)
+|+|++|++++.+|..+..+++|+.|++++|++++..+.
T Consensus 527 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 527 YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 999999999999999999999999999999999987773
No 23
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=440.09 Aligned_cols=417 Identities=23% Similarity=0.214 Sum_probs=337.4
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
+++++|+|++|+++ .++...|.++++|++|+|++|.|.++++..|.++++|++|+|++|++++.++ ..|..+++|
T Consensus 28 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L 102 (570)
T 2z63_A 28 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL----GAFSGLSSL 102 (570)
T ss_dssp SSCCEEECCSCCCC-EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECT----TTTTTCTTC
T ss_pred ccccEEEccCCccC-ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCH----hhhcCcccc
Confidence 36899999999998 6777788999999999999999999988899999999999999999886543 367889999
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCccccc-CCCCCCCCCCCcEEEccCCcccccCCchhhcccCC----cEE
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGP-LPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSM----IFI 156 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L 156 (843)
++|++++|+++...+..|+.+++|++|+|++|.+++. .|..|+++++|++|++++|.+++..+..|..+++| +.|
T Consensus 103 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L 182 (570)
T 2z63_A 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182 (570)
T ss_dssp CEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEE
T ss_pred ccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhc
Confidence 9999999999866665789999999999999999863 58889999999999999999998888888888888 788
Q ss_pred EeecCcccccCCCCccCCCCccEEEcccC---------------------------------------------------
Q 003156 157 SVSNNTLTGDIPHWIGNISTLEFLDFSNN--------------------------------------------------- 185 (843)
Q Consensus 157 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N--------------------------------------------------- 185 (843)
++++|.+.+..|..|..+ +|++|++++|
T Consensus 183 ~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~ 261 (570)
T 2z63_A 183 DLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE 261 (570)
T ss_dssp ECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEE
T ss_pred ccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhh
Confidence 888888776655555443 4444444443
Q ss_pred -------CcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccC---------------------cceeeccCCcceec
Q 003156 186 -------HLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLG---------------------LEEIDLSENGFMGS 237 (843)
Q Consensus 186 -------~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~---------------------L~~L~l~~n~l~~~ 237 (843)
.+.+..+..+..+++|+.|++++|.+. .+|..+...+ |+.|++++|.+.+.
T Consensus 262 l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 262 FRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA 340 (570)
T ss_dssp EEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCB
T ss_pred hhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccc
Confidence 222233344444455555555555554 3444333334 45555555554433
Q ss_pred CCCCCCCCCcccccCccCEEeCCCCccceeC--CccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCccccc
Q 003156 238 IPPGSSSSSSSTLFQTLRILDLSSNNLVGDI--PAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGS 315 (843)
Q Consensus 238 ~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 315 (843)
++. ..+++|++|++++|++++.. |..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+.+.
T Consensus 341 ~~~--------~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~ 411 (570)
T 2z63_A 341 FSE--------VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQM 411 (570)
T ss_dssp CCC--------CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESC
T ss_pred ccc--------ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccc
Confidence 322 45789999999999998654 77888999999999999999876554 89999999999999999977
Q ss_pred CC-ccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEeccccccc-ccCCccccCCCCCCEEEccCCcccccCCcchh
Q 003156 316 IP-QEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLS-GSIPKSISNLNKLKILKLEFNELSGEIPQELG 393 (843)
Q Consensus 316 ~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 393 (843)
.+ ..+..+++|++|++++|.+++..|..|.++++|+.|+|++|+++ +.+|..+..+++|++|+|++|++++..|..+.
T Consensus 412 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 491 (570)
T 2z63_A 412 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491 (570)
T ss_dssp TTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhh
Confidence 66 57889999999999999999999999999999999999999998 67999999999999999999999999899999
Q ss_pred cccccceEeeccccceecCCC-CCCCCCCCCCCcCCCCCCCC
Q 003156 394 KLASLLAVNVSYNRLIGRLPV-GGVFPTLDQSSLQGNLGICS 434 (843)
Q Consensus 394 ~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~ 434 (843)
.+++|+.|++++|++++.+|. ...++.+....+.+|+..|.
T Consensus 492 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 492 SLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 999999999999999998875 35678888889999998875
No 24
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.8e-45 Score=436.76 Aligned_cols=404 Identities=22% Similarity=0.191 Sum_probs=264.4
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
+++++|+|++|+|+ .++...|.++++|++|+|++|.+.++.+..|.++++|++|+|++|++++.++ ..|..+++|
T Consensus 25 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~----~~~~~l~~L 99 (680)
T 1ziw_A 25 TNITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSD----KTFAFCTNL 99 (680)
T ss_dssp TTCSEEECCSSCCC-CCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCT----TTTTTCTTC
T ss_pred CCCcEEECCCCCCC-CcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccCh----hhhccCCCC
Confidence 46899999999998 6787889999999999999999999988999999999999999999885443 357889999
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhh--cccCCcEEEee
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLR--LLNSMIFISVS 159 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~ 159 (843)
++|+|++|++.+..+..|..+++|++|+|++|.+++..|..+.++++|++|++++|.+++..+..+. .+++|+.|+++
T Consensus 100 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~ 179 (680)
T 1ziw_A 100 TELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELS 179 (680)
T ss_dssp SEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECT
T ss_pred CEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECC
Confidence 9999999999877778899999999999999999988888889999999999999999877776665 34788888888
Q ss_pred cCcccccCCCCccCC---------------------------CCccEEEcccCCcCCCCCCCCCCCCC--CcEEEecCCc
Q 003156 160 NNTLTGDIPHWIGNI---------------------------STLEFLDFSNNHLTGSLPSSLFNCKK--LSVIRLRGNS 210 (843)
Q Consensus 160 ~N~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~i~~~~~~~~~~l~~--L~~L~L~~N~ 210 (843)
+|++++..|..|..+ ++|+.|++++|.+++..|..|.+++. |+.|++++|.
T Consensus 180 ~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~ 259 (680)
T 1ziw_A 180 SNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNN 259 (680)
T ss_dssp TCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSC
T ss_pred CCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCC
Confidence 888877666655543 33455555555555555555555533 6666666666
Q ss_pred CCCCCCchhhcc-CcceeeccCCcceecCCCCCCC---------------------------CCcccccCccCEEeCCCC
Q 003156 211 LNGNIPEGLFDL-GLEEIDLSENGFMGSIPPGSSS---------------------------SSSSTLFQTLRILDLSSN 262 (843)
Q Consensus 211 l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~~---------------------------~~~~~~l~~L~~L~L~~n 262 (843)
+++..|..+... +|+.|++++|.+.+..|..... ...+..+++|++|++++|
T Consensus 260 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n 339 (680)
T 1ziw_A 260 LNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDN 339 (680)
T ss_dssp CCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSC
T ss_pred cCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCC
Confidence 655444444443 4666666666665544432211 012345677888888888
Q ss_pred ccceeCCccccCCCCCcEEEcCCCcccC--CCCCCcccc--ccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCC
Q 003156 263 NLVGDIPAEMGLFANLRYLNLSSNHLRS--RIPPELGYF--HSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTG 338 (843)
Q Consensus 263 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 338 (843)
.+.+..+..|..+++|++|++++|.+.. .....|..+ .+|+.|++++|++++..|..|..+++|+.|++++|.+++
T Consensus 340 ~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 419 (680)
T 1ziw_A 340 DIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQ 419 (680)
T ss_dssp CBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEE
T ss_pred ccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCcc
Confidence 8887777777777777777776665321 111222222 244455555555554444555555555555555555544
Q ss_pred Cch-hhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc--ccCCcchhcccccceEeecccccee
Q 003156 339 PIP-QVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS--GEIPQELGKLASLLAVNVSYNRLIG 410 (843)
Q Consensus 339 ~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~l~ls~N~l~~ 410 (843)
.+| ..|.++++|+.|++++|++++..+..|..+++|+.|++++|.++ +.+|..+..+++|+.|++++|++++
T Consensus 420 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 494 (680)
T 1ziw_A 420 ELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN 494 (680)
T ss_dssp ECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCC
T ss_pred ccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCc
Confidence 333 34455555555555555544444444444444444444444433 2334444444444444444444443
No 25
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.7e-46 Score=440.96 Aligned_cols=413 Identities=21% Similarity=0.255 Sum_probs=313.6
Q ss_pred CccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccc-----------------------------------
Q 003156 3 NMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIF----------------------------------- 47 (843)
Q Consensus 3 ~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f----------------------------------- 47 (843)
+++.|+|++|+++|.+|+ .|+++++|+.|+|++|.+.... ..|
T Consensus 82 ~V~~L~L~~~~l~g~lp~-~l~~L~~L~~L~Ls~N~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPD-AIGQLTELEVLALGSHGEKVNE-RLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CEEEEECTTSCCEEEECG-GGGGCTTCCEEESCCGGGGGTC-CSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSC
T ss_pred CEEEEEecCcccCCcCCh-HHhcCccceEEECcCCccccCC-ccccccccccCchHHHHHHHHhhHHHhhhccCchhhHH
Confidence 688999999999999996 5789999999999999762100 000
Q ss_pred ------------------cCCCCCCEEECC--CCCCccccCCCcCccccCCccCCEEecCCccCccc-------------
Q 003156 48 ------------------NYCSSLNTLNLS--NNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGS------------- 94 (843)
Q Consensus 48 ------------------~~l~~L~~L~Ls--~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~------------- 94 (843)
.....++.+.+. .|++++++. .|..+++|++|+|++|.+++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~ip~-----~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~ 234 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSK-----AVMRLTKLRQFYMGNSPFVAENICEAWENENSEY 234 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECG-----GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHH
T ss_pred HHHHHHhhcCccccccccccccchhhhhhccccCCCccCCH-----HHhcccCCCEEECcCCccccccccccccccccch
Confidence 011122223232 466665322 477788888888888888864
Q ss_pred ----Cchhhh--cCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCc-ccc-cCCchhhcc------cCCcEEEeec
Q 003156 95 ----IPQGVA--ALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNL-FTG-QLPVSLRLL------NSMIFISVSN 160 (843)
Q Consensus 95 ----~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L~L~~ 160 (843)
+|..+. .+++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+..+ ++|++|+|++
T Consensus 235 ~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~ 314 (636)
T 4eco_A 235 AQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGY 314 (636)
T ss_dssp HHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCS
T ss_pred hcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCC
Confidence 777777 88888888888888888888888888888888888887 777 677777776 8888888888
Q ss_pred CcccccCCC--CccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-C-cceeeccCCccee
Q 003156 161 NTLTGDIPH--WIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-G-LEEIDLSENGFMG 236 (843)
Q Consensus 161 N~l~~~~p~--~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~-L~~L~l~~n~l~~ 236 (843)
|+++ .+|. .|+++++|++|+|++|++++.+| .+..+++|+.|++++|.++ .+|..+... + |+.|++++|.+.
T Consensus 315 n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~- 390 (636)
T 4eco_A 315 NNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK- 390 (636)
T ss_dssp SCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-
T ss_pred CcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-
Confidence 8888 7777 78888888888888888887777 7888888888888888887 777776665 5 888888888887
Q ss_pred cCCCCCCCCCcccccCccCEEeCCCCccceeCCcccc-------CCCCCcEEEcCCCcccCCCCCCccccccceEEEccC
Q 003156 237 SIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMG-------LFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRN 309 (843)
Q Consensus 237 ~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 309 (843)
.+|..... ..+++|+.|++++|.+.+.+|..+. .+++|++|++++|.++++.+..+..+++|++|+|++
T Consensus 391 ~lp~~~~~----~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 391 YIPNIFDA----KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp SCCSCCCT----TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred ccchhhhh----cccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 56653321 1234788888888888888887777 777888888888888865444556678888888888
Q ss_pred CcccccCCccccc-c-------CCCcEEEcCCCCCCCCchhhhc--ccCCCcEEecccccccccCCccccCCCCCCEEEc
Q 003156 310 NALYGSIPQEVCE-S-------RSLGILQLDGNSLTGPIPQVIR--NCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKL 379 (843)
Q Consensus 310 n~l~~~~~~~~~~-l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 379 (843)
|+++ .+|..+.. . ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+.|+|
T Consensus 467 N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 467 NMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp SCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred CCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 8888 55544333 2 28888888888888 6777776 88888888888888886 7888888888888888
Q ss_pred ------cCCcccccCCcchhcccccceEeeccccceecCCCCCCCCCCCCCCcCCCCCCCCC
Q 003156 380 ------EFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGICSP 435 (843)
Q Consensus 380 ------~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 435 (843)
++|++.+.+|..+.++++|+.|++++|++ +.+|.. .++++....+.+|+..|..
T Consensus 544 s~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 544 RNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred CCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 55777888888888888888888888888 677753 3367777788888877753
No 26
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.7e-45 Score=429.86 Aligned_cols=398 Identities=20% Similarity=0.210 Sum_probs=320.9
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
+++|++|+|++|+|+ .+++.+|.++++|++|+|++|.|.++.+..|.++++|++|+|++|.+++.++ ..|..+++
T Consensus 55 l~~L~~L~Ls~n~l~-~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~ 129 (606)
T 3vq2_A 55 FSELQWLDLSRCEIE-TIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLES----FPIGQLIT 129 (606)
T ss_dssp CTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSS----SCCTTCTT
T ss_pred CccCcEEeCCCCccc-ccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccc----cccCCCCC
Confidence 578999999999999 6777789999999999999999999989999999999999999999986543 35888999
Q ss_pred CCEEecCCccCcc-cCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCc----EEEccCCcccccCCch---------
Q 003156 81 LRTLDLSHNLFSG-SIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLT----TLDLSNNLFTGQLPVS--------- 146 (843)
Q Consensus 81 L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~--------- 146 (843)
|++|+|++|.+.+ .+|..|..+++|++|+|++|++++..+..|+.+++|+ +|++++|.+++..+..
T Consensus 130 L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L 209 (606)
T 3vq2_A 130 LKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHEL 209 (606)
T ss_dssp CCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEE
T ss_pred CCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeee
Confidence 9999999999986 4688999999999999999999887777665544433 5555555555333322
Q ss_pred -----------------------------------------------------------------------hhcccCCcE
Q 003156 147 -----------------------------------------------------------------------LRLLNSMIF 155 (843)
Q Consensus 147 -----------------------------------------------------------------------~~~l~~L~~ 155 (843)
+..+++|+.
T Consensus 210 ~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~ 289 (606)
T 3vq2_A 210 TLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSA 289 (606)
T ss_dssp EEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSE
T ss_pred eccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCE
Confidence 223344444
Q ss_pred EEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCC--------------------CCCCCCCCcEEEecCCcCCCC-
Q 003156 156 ISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPS--------------------SLFNCKKLSVIRLRGNSLNGN- 214 (843)
Q Consensus 156 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~--------------------~~~~l~~L~~L~L~~N~l~~~- 214 (843)
|++++|.+. .+| .+..+++|++|++++|.+. .+|. .+..+++|+.|++++|.+++.
T Consensus 290 L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l~-~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~ 366 (606)
T 3vq2_A 290 MSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQLK-QFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSG 366 (606)
T ss_dssp EEEESCCCC-CCC-CCCTTCCCSEEEEESCCCS-SCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEE
T ss_pred EEecCccch-hhh-hccccccCCEEEcccccCc-ccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCc
Confidence 444444443 233 5556666666666666653 3442 344556666666666666644
Q ss_pred -CCchhhcc-CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCC-ccccCCCCCcEEEcCCCcccCC
Q 003156 215 -IPEGLFDL-GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIP-AEMGLFANLRYLNLSSNHLRSR 291 (843)
Q Consensus 215 -~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ 291 (843)
+|..+... +|+.|++++|.+.+ +|. .+..+++|+.|++++|++.+..| ..+..+++|++|++++|.+.+.
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 439 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAII-MSA------NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKID 439 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEEE-ECC------CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred chhhhhccCCcccEeECCCCcccc-chh------hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCcc
Confidence 25555554 68888888888765 332 23457899999999999998877 6899999999999999999999
Q ss_pred CCCCccccccceEEEccCCcccc-cCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccC
Q 003156 292 IPPELGYFHSLIHLDLRNNALYG-SIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISN 370 (843)
Q Consensus 292 ~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 370 (843)
.|..+..+++|++|++++|++++ .+|..+..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..|..|.+
T Consensus 440 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 519 (606)
T 3vq2_A 440 FDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQ 519 (606)
T ss_dssp CTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTT
T ss_pred chhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccC
Confidence 99999999999999999999997 47899999999999999999999999999999999999999999999988999999
Q ss_pred CCCCCEEEccCCcccccCCcchhccc-ccceEeeccccceecCCC
Q 003156 371 LNKLKILKLEFNELSGEIPQELGKLA-SLLAVNVSYNRLIGRLPV 414 (843)
Q Consensus 371 l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~~~~p~ 414 (843)
+++|++|+|++|+|+ .+|..+..++ +|+.|++++|++.+..+.
T Consensus 520 l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 520 LYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999999999 6777799997 599999999999988775
No 27
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.5e-45 Score=439.16 Aligned_cols=393 Identities=20% Similarity=0.233 Sum_probs=304.5
Q ss_pred CccEEecCCCcCcccCChhhhhcCCCCcEEEc-cCcccccc---------------------------------------
Q 003156 3 NMKFLDLSNNLLSGPVPYQLFENCASLRYLSL-AGNILQGP--------------------------------------- 42 (843)
Q Consensus 3 ~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L-~~n~i~~~--------------------------------------- 42 (843)
+++.|+|++|++.|.+|+. |.+|++|+.|+| ++|.+.+.
T Consensus 324 ~V~~L~Ls~~~L~G~ip~~-l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 324 RVTGLSLAGFGAKGRVPDA-IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp CEEEEECTTTCCEEEECGG-GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CEEEEECccCCCCCcCchH-HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 6889999999999999965 799999999999 77755332
Q ss_pred -------------------------------------ccccccCCCCCCEEECCCCCCcc------------------cc
Q 003156 43 -------------------------------------IGKIFNYCSSLNTLNLSNNHFSG------------------DL 67 (843)
Q Consensus 43 -------------------------------------~~~~f~~l~~L~~L~Ls~N~i~~------------------~~ 67 (843)
.+..|.++++|++|+|++|++++ ++
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 33457888888888888888887 32
Q ss_pred CCCcCcccc--CCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCc-ccc-cCCCCC-------CCCCCCcEEEccC
Q 003156 68 DFASGYGIW--SLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQ-FSG-PLPADI-------GFCPHLTTLDLSN 136 (843)
Q Consensus 68 ~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~-------~~l~~L~~L~L~~ 136 (843)
+ .+. .+++|++|+|++|++.+.+|..|..+++|++|+|++|+ +++ .+|..+ ..+++|++|+|++
T Consensus 483 ~-----~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~ 557 (876)
T 4ecn_A 483 E-----ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGY 557 (876)
T ss_dssp S-----CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCS
T ss_pred h-----hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeC
Confidence 2 333 78888888888888887888888888888888888887 776 556533 4455888888888
Q ss_pred CcccccCCc--hhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCC-CcEEEecCCcCCC
Q 003156 137 NLFTGQLPV--SLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKK-LSVIRLRGNSLNG 213 (843)
Q Consensus 137 N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~ 213 (843)
|.++ .+|. .|..+++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++
T Consensus 558 N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~- 632 (876)
T 4ecn_A 558 NNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK- 632 (876)
T ss_dssp SCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-
T ss_pred CcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-
Confidence 8888 6676 8888888888888888888 677 7888888888888888888 77888888888 888888888888
Q ss_pred CCCchhhcc---CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccc-cCCCCCcEEEcCCCccc
Q 003156 214 NIPEGLFDL---GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEM-GLFANLRYLNLSSNHLR 289 (843)
Q Consensus 214 ~~p~~~~~~---~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~ 289 (843)
.+|..+... +|+.|++++|++.+.+|..... ......++|+.|+|++|+++ .+|..+ ..+++|+.|+|++|+|+
T Consensus 633 ~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~-l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~ 710 (876)
T 4ecn_A 633 YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCS-MDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT 710 (876)
T ss_dssp SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSC-TTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS
T ss_pred cCchhhhccccCCCCEEECcCCcCCCccccchhh-hccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC
Confidence 677666554 3888888888888766543211 11112347888888888888 455544 47788888888888888
Q ss_pred CCCCCCccc-------cccceEEEccCCcccccCCcccc--ccCCCcEEEcCCCCCCCCchhhhcccCCCcEEeccc---
Q 003156 290 SRIPPELGY-------FHSLIHLDLRNNALYGSIPQEVC--ESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSH--- 357 (843)
Q Consensus 290 ~~~~~~~~~-------l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~--- 357 (843)
.+.+..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|.|++ +|..+.++++|+.|+|++
T Consensus 711 ~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ 788 (876)
T 4ecn_A 711 SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRD 788 (876)
T ss_dssp CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBC
T ss_pred ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCC
Confidence 544444432 338888888888888 6777776 88888888888888886 687888888888888866
Q ss_pred ---ccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecCC
Q 003156 358 ---NHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLP 413 (843)
Q Consensus 358 ---N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 413 (843)
|++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++....+
T Consensus 789 ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp TTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEEC
T ss_pred cccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccCh
Confidence 777788888888888888888888888 57887765 588888888888765544
No 28
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=439.53 Aligned_cols=413 Identities=23% Similarity=0.202 Sum_probs=329.1
Q ss_pred cEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEE
Q 003156 5 KFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTL 84 (843)
Q Consensus 5 ~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L 84 (843)
+..|.++++++ .+|. -.++|++|+|++|.|+++.+..|.++++|++|+|++|.+.+. +.+..|.++++|++|
T Consensus 7 ~~~dcs~~~L~-~vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~---i~~~~f~~L~~L~~L 78 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLT---IDKEAFRNLPNLRIL 78 (844)
T ss_dssp EEEEESCCCSS-CCCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCE---ECTTTTSSCTTCCEE
T ss_pred eEEEccCCCCC-CCCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccc---cCHHHhcCCCCCCEE
Confidence 46889999999 8996 368999999999999999999999999999999999965432 334578999999999
Q ss_pred ecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCC--CCCCCCCcEEEccCCcccccCC-chhhcccCCcEEEeecC
Q 003156 85 DLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPAD--IGFCPHLTTLDLSNNLFTGQLP-VSLRLLNSMIFISVSNN 161 (843)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N 161 (843)
+|++|.+.+..|..|.++++|++|+|++|.+++..|.. |.++++|++|+|++|.+++..+ ..|+.+++|++|+|++|
T Consensus 79 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N 158 (844)
T 3j0a_A 79 DLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSN 158 (844)
T ss_dssp ECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESS
T ss_pred ECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCC
Confidence 99999999889999999999999999999999766554 8999999999999999997765 68999999999999999
Q ss_pred cccccCCCCccCC--CCccEEEcccCCcCCCCCCCCCCCCC------CcEEEecCCcCCCCCCchhhc------------
Q 003156 162 TLTGDIPHWIGNI--STLEFLDFSNNHLTGSLPSSLFNCKK------LSVIRLRGNSLNGNIPEGLFD------------ 221 (843)
Q Consensus 162 ~l~~~~p~~~~~l--~~L~~L~L~~N~i~~~~~~~~~~l~~------L~~L~L~~N~l~~~~p~~~~~------------ 221 (843)
++++..+..|..+ ++|+.|+|++|.+.+..|..+..+.+ |+.|++++|.+++..+..+..
T Consensus 159 ~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l 238 (844)
T 3j0a_A 159 QIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLIL 238 (844)
T ss_dssp CCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEEC
T ss_pred cCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceec
Confidence 9999999999888 89999999999999888887777665 999999999887666554432
Q ss_pred ---------------------------cCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccC
Q 003156 222 ---------------------------LGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGL 274 (843)
Q Consensus 222 ---------------------------~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 274 (843)
.+++.|++++|.+.+..|... ..+++|+.|+|++|++++..|..|..
T Consensus 239 ~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~------~~l~~L~~L~L~~n~i~~~~~~~~~~ 312 (844)
T 3j0a_A 239 AHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF------ETLKDLKVLNLAYNKINKIADEAFYG 312 (844)
T ss_dssp CSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS------SSCCCCCEEEEESCCCCEECTTTTTT
T ss_pred ccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh------hcCCCCCEEECCCCcCCCCChHHhcC
Confidence 257888888888876654432 34677888888888888777777788
Q ss_pred CCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCc--------------
Q 003156 275 FANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPI-------------- 340 (843)
Q Consensus 275 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-------------- 340 (843)
+++|++|++++|.+++..|..|..+++|+.|++++|++.+..+..|..+++|+.|+|++|.+++..
T Consensus 313 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~ 392 (844)
T 3j0a_A 313 LDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNK 392 (844)
T ss_dssp CSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCC
T ss_pred CCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCC
Confidence 888888888888887777777777888888888888877666666777777777777777665321
Q ss_pred --------------------------hhhhcccCCCcEEecccccccc------------------------------cC
Q 003156 341 --------------------------PQVIRNCTSLYLLSLSHNHLSG------------------------------SI 364 (843)
Q Consensus 341 --------------------------p~~~~~l~~L~~L~Ls~N~l~~------------------------------~~ 364 (843)
+..+.++++|+.|+|++|++++ ..
T Consensus 393 l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 472 (844)
T 3j0a_A 393 LVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELC 472 (844)
T ss_dssp CCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCC
T ss_pred cccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccc
Confidence 1123356666666666666653 22
Q ss_pred CccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecCCCCCCCCCCCCCCcCCCCCC
Q 003156 365 PKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGI 432 (843)
Q Consensus 365 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 432 (843)
|..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++.+|..-. +.+....+.+|...
T Consensus 473 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~ 539 (844)
T 3j0a_A 473 WDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLL 539 (844)
T ss_dssp SSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCC
T ss_pred hhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCC
Confidence 34567788888888888888888888888888888999999988876664322 55666666666543
No 29
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-45 Score=425.58 Aligned_cols=403 Identities=22% Similarity=0.261 Sum_probs=326.5
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
+++|++|+|++|+++ .+++.+|.++++|++|+|++|.+..+++..|.++++|++|+|++|++++.+. ..|..+++
T Consensus 51 l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~----~~~~~l~~ 125 (570)
T 2z63_A 51 FPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLEN----FPIGHLKT 125 (570)
T ss_dssp CSSCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTT----CSCTTCTT
T ss_pred CCCceEEECCCCcCC-ccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCC----cccccccc
Confidence 578999999999999 7888889999999999999999999999999999999999999999986543 24788999
Q ss_pred CCEEecCCccCcc-cCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCC----cEEEccCCcccccCCchhhcccCCcE
Q 003156 81 LRTLDLSHNLFSG-SIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHL----TTLDLSNNLFTGQLPVSLRLLNSMIF 155 (843)
Q Consensus 81 L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~N~l~~~~~~~~~~l~~L~~ 155 (843)
|++|+|++|.+.+ .+|..|.++++|++|++++|.+++..+..++.+++| +.|++++|.+++..+..|... +|+.
T Consensus 126 L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~ 204 (570)
T 2z63_A 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHK 204 (570)
T ss_dssp CCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEE
T ss_pred ccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccC-ccee
Confidence 9999999999986 368999999999999999999998877778777777 788888888776666555433 3444
Q ss_pred EEeecC----------------------------------------------------------cccccCCCCccCCCCc
Q 003156 156 ISVSNN----------------------------------------------------------TLTGDIPHWIGNISTL 177 (843)
Q Consensus 156 L~L~~N----------------------------------------------------------~l~~~~p~~~~~l~~L 177 (843)
|++++| .+.+..|..|..+++|
T Consensus 205 L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L 284 (570)
T 2z63_A 205 LTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNV 284 (570)
T ss_dssp EEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTC
T ss_pred EecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcc
Confidence 444443 2222334444445555
Q ss_pred cEEEcccCCcCCCCCCCCCC--------------------CCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceec
Q 003156 178 EFLDFSNNHLTGSLPSSLFN--------------------CKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGS 237 (843)
Q Consensus 178 ~~L~L~~N~i~~~~~~~~~~--------------------l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~ 237 (843)
++|++++|.++ .+|..+.. +++|+.|++++|.+.+..+. ....+|+.|++++|.+.+.
T Consensus 285 ~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~-~~~~~L~~L~l~~n~l~~~ 362 (570)
T 2z63_A 285 SSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE-VDLPSLEFLDLSRNGLSFK 362 (570)
T ss_dssp SEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC-CBCTTCCEEECCSSCCBEE
T ss_pred cEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc-ccCCCCCEEeCcCCccCcc
Confidence 55555555544 34444444 45555555555555444333 2223799999999998754
Q ss_pred CCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCC-CCccccccceEEEccCCcccccC
Q 003156 238 IPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIP-PELGYFHSLIHLDLRNNALYGSI 316 (843)
Q Consensus 238 ~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~ 316 (843)
... ......+++|++|++++|.+.+..+. +..+++|++|++++|.+.+..+ ..+..+++|++|++++|++.+..
T Consensus 363 ~~~----~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 437 (570)
T 2z63_A 363 GCC----SQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 437 (570)
T ss_dssp EEE----EHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECC
T ss_pred ccc----cccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccc
Confidence 210 01234578999999999999965555 9999999999999999998766 57899999999999999999999
Q ss_pred CccccccCCCcEEEcCCCCCC-CCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcc
Q 003156 317 PQEVCESRSLGILQLDGNSLT-GPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKL 395 (843)
Q Consensus 317 ~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 395 (843)
|..+..+++|+.|++++|.++ +.+|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+.++
T Consensus 438 ~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 517 (570)
T 2z63_A 438 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRL 517 (570)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred hhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcc
Confidence 999999999999999999997 5789999999999999999999998889999999999999999999999888899999
Q ss_pred cccceEeeccccceecCCCCC
Q 003156 396 ASLLAVNVSYNRLIGRLPVGG 416 (843)
Q Consensus 396 ~~L~~l~ls~N~l~~~~p~~~ 416 (843)
++|+.|++++|++++.+|...
T Consensus 518 ~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 518 TSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp TTCCEEECCSSCBCCCTTTTH
T ss_pred cCCcEEEecCCcccCCCcchH
Confidence 999999999999999998643
No 30
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9e-46 Score=404.66 Aligned_cols=266 Identities=23% Similarity=0.320 Sum_probs=204.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcC------Ce
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTP------QL 626 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~ 626 (843)
+.|+..+.||+|+||+||+|++..+|+.||||++..... ....+.+.+|++++++++|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 457788899999999999999998999999999964432 22345688999999999999999999997643 56
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.|+|||||+ |+|.+++... ..+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~----~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS----QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 799999996 6899999764 5699999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccc--cceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC
Q 003156 707 RLLTRLD--KHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN 784 (843)
Q Consensus 707 ~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 784 (843)
+.+.... .........||+.|||||++.+...++.++||||+||++|||++|+.||... .....+............
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~-~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK-NYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS-SHHHHHHHHHHHHCCCCG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC-CHHHHHHHHHHhcCCCCh
Confidence 8764322 1222356789999999998866667899999999999999999999999643 222222222221100000
Q ss_pred -ccc------------ccCCCCCC----CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 785 -VLD------------CVDPSMGD----YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 785 -~~~------------~~d~~l~~----~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
... .+.+..+. .......++.+|+.+|+..||++|||++|+++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 00000000 011234567899999999999999999999987
No 31
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.1e-45 Score=428.43 Aligned_cols=391 Identities=21% Similarity=0.264 Sum_probs=332.5
Q ss_pred CCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcC-----------------------------ccc--
Q 003156 27 ASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASG-----------------------------YGI-- 75 (843)
Q Consensus 27 ~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~-----------------------------~~~-- 75 (843)
..++.|+|++|.+++..+..|.++++|++|+|++|.+......... ..+
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 4799999999999988888999999999999999976211100000 000
Q ss_pred -----------------cCCccCCEEecC--CccCcccCchhhhcCCCCCEEEcCCCccccc-----------------C
Q 003156 76 -----------------WSLKRLRTLDLS--HNLFSGSIPQGVAALHYLKELLLQGNQFSGP-----------------L 119 (843)
Q Consensus 76 -----------------~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~ 119 (843)
.....++.+.+. +|++++ +|..|+.+++|++|+|++|.+++. +
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 011122233332 688987 899999999999999999999985 8
Q ss_pred CCCCC--CCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCc-ccc-cCCCCccCC------CCccEEEcccCCcCC
Q 003156 120 PADIG--FCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNT-LTG-DIPHWIGNI------STLEFLDFSNNHLTG 189 (843)
Q Consensus 120 ~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~i~~ 189 (843)
|..++ ++++|++|+|++|.+.+.+|..|..+++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~- 318 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK- 318 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-
T ss_pred chhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-
Confidence 99999 99999999999999999999999999999999999998 988 789888876 99999999999999
Q ss_pred CCCC--CCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcceecCCCCCCCCCcccccCc-cCEEeCCCCccc
Q 003156 190 SLPS--SLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFMGSIPPGSSSSSSSTLFQT-LRILDLSSNNLV 265 (843)
Q Consensus 190 ~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~-L~~L~L~~n~l~ 265 (843)
.+|. .+.++++|+.|++++|.++|.+| .+..+ +|+.|++++|++. .+|.. +..+++ |++|++++|.++
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~------l~~l~~~L~~L~Ls~N~l~ 390 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPAN------FCGFTEQVENLSFAHNKLK 390 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTT------SEEECTTCCEEECCSSCCS
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHh------hhhhcccCcEEEccCCcCc
Confidence 7888 99999999999999999998999 55554 7999999999998 66654 345788 999999999999
Q ss_pred eeCCccccCCC--CCcEEEcCCCcccCCCCCCcc-------ccccceEEEccCCcccccCCccccccCCCcEEEcCCCCC
Q 003156 266 GDIPAEMGLFA--NLRYLNLSSNHLRSRIPPELG-------YFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSL 336 (843)
Q Consensus 266 ~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 336 (843)
.+|..+..+. +|++|++++|.+.+..|..+. .+.+|++|+|++|++++..+..+..+++|+.|+|++|++
T Consensus 391 -~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l 469 (636)
T 4eco_A 391 -YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNML 469 (636)
T ss_dssp -SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCC
T ss_pred -ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCC
Confidence 7888887765 899999999999999998888 788999999999999944334456699999999999999
Q ss_pred CCCchhh-hccc-------CCCcEEecccccccccCCcccc--CCCCCCEEEccCCcccccCCcchhcccccceEee---
Q 003156 337 TGPIPQV-IRNC-------TSLYLLSLSHNHLSGSIPKSIS--NLNKLKILKLEFNELSGEIPQELGKLASLLAVNV--- 403 (843)
Q Consensus 337 ~~~~p~~-~~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l--- 403 (843)
+ .+|.. +..+ ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+.|+|
T Consensus 470 ~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 470 T-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp S-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred C-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 9 55554 4333 39999999999999 7888887 99999999999999997 9999999999999999
Q ss_pred ---ccccceecCCC-CCCCCCCCCCCcCCCCC
Q 003156 404 ---SYNRLIGRLPV-GGVFPTLDQSSLQGNLG 431 (843)
Q Consensus 404 ---s~N~l~~~~p~-~~~~~~~~~~~~~~n~~ 431 (843)
++|++.+.+|. .+.++++....+.+|..
T Consensus 547 ~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp BCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred cccccCcccccChHHHhcCCCCCEEECCCCcC
Confidence 56889999994 35678888889999976
No 32
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.7e-45 Score=394.29 Aligned_cols=263 Identities=22% Similarity=0.308 Sum_probs=203.5
Q ss_pred hhhhhhcCeeccccceEEEEEEEC---CCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFG---TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 628 (843)
.+.|+..+.||+|+||+||+|+.+ .+++.||+|++.... ....+.+|+++++.+ +|||||++++++.+.+..+
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 356788889999999999999874 357899999985543 456788999999998 6999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC-CCcEEeeccCcc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN-YNPRISDFGLAR 707 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~ 707 (843)
+||||+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 97 lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 9999999999999984 278999999999999999999999 99999999999999876 799999999998
Q ss_pred cccccccc--------------------------eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCC
Q 003156 708 LLTRLDKH--------------------------VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRP 761 (843)
Q Consensus 708 ~~~~~~~~--------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p 761 (843)
........ .......||+.|||||++.+...++.++||||+||++|||+||+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 65432110 0112346999999999886666789999999999999999999999
Q ss_pred CcCCCCchhhHHHHHHHHHh---------hC---------------------CcccccCCCC----------CCCChhhH
Q 003156 762 VEYGEDNVVILSEHVRVLLE---------EG---------------------NVLDCVDPSM----------GDYPEDEV 801 (843)
Q Consensus 762 ~~~~~~~~~~l~~~~~~~~~---------~~---------------------~~~~~~d~~l----------~~~~~~~~ 801 (843)
|..+.++...+.......-. .. ...+...+.. ........
T Consensus 247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is 326 (361)
T 4f9c_A 247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP 326 (361)
T ss_dssp SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred CCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCC
Confidence 98766655444333221100 00 0000000000 00112334
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 802 LPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 802 ~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.++.+|+.+|++.||++|||++|+++|
T Consensus 327 ~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 327 DEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 567899999999999999999999875
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.4e-45 Score=418.11 Aligned_cols=409 Identities=22% Similarity=0.196 Sum_probs=302.3
Q ss_pred cEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEE
Q 003156 5 KFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTL 84 (843)
Q Consensus 5 ~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L 84 (843)
++||+++|+++ .+|..++ ++|++|+|++|.|.++++..|.++++|++|+|++|+|++.. +..|..+++|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L 74 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS---QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLD----ISVFKFNQELEYL 74 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC---TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEE----GGGGTTCTTCCEE
T ss_pred ceEecCCCCcc-ccccccc---ccccEEECCCCcccccChhhccccccccEEecCCCccCCcC----hHHhhcccCCCEE
Confidence 56777777777 6776543 67777777777777777777777777777777777777542 2356677777777
Q ss_pred ecCCccCcccCchhhhcCCCCCEEEcCCCcccc-cCCCCCCCCCCCcEEEccCCcccccCCchhhcccCC--cEEEeecC
Q 003156 85 DLSHNLFSGSIPQGVAALHYLKELLLQGNQFSG-PLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSM--IFISVSNN 161 (843)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N 161 (843)
+|++|+|+. +|.. .+++|++|+|++|.+++ ..|..|+++++|++|++++|.+++ ..+..+++| +.|++++|
T Consensus 75 ~Ls~N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n 148 (520)
T 2z7x_B 75 DLSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLG 148 (520)
T ss_dssp ECCSSCCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEEC
T ss_pred ecCCCceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecc
Confidence 777777773 4443 67777777777777775 356677777777777777777764 456666666 77777777
Q ss_pred cc--cccCCCCccC--------------------------CCCccEEEcccCC-------cCCCCCCCCCCCCCCcEEEe
Q 003156 162 TL--TGDIPHWIGN--------------------------ISTLEFLDFSNNH-------LTGSLPSSLFNCKKLSVIRL 206 (843)
Q Consensus 162 ~l--~~~~p~~~~~--------------------------l~~L~~L~L~~N~-------i~~~~~~~~~~l~~L~~L~L 206 (843)
++ .+..|..|.. +++|+.|++++|. +.+.++ .+..+++|+.|++
T Consensus 149 ~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l 227 (520)
T 2z7x_B 149 ETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTL 227 (520)
T ss_dssp TTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEE
T ss_pred cccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccc
Confidence 77 5555555544 5566666666665 443333 5666677777777
Q ss_pred cCCcCCCCCCchhh----ccCcceeeccCCcceecCCCCCCCCCccccc--------------------------CccCE
Q 003156 207 RGNSLNGNIPEGLF----DLGLEEIDLSENGFMGSIPPGSSSSSSSTLF--------------------------QTLRI 256 (843)
Q Consensus 207 ~~N~l~~~~p~~~~----~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l--------------------------~~L~~ 256 (843)
++|.+++..+..+. ..+|+.|++++|.+.|.+|....... ...+ .+|+.
T Consensus 228 ~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~-~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~ 306 (520)
T 2z7x_B 228 NNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYS-GTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKN 306 (520)
T ss_dssp EEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCC-SCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSE
T ss_pred cccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcc-cccCceeEeccccccceecchhhhhcccccCceeE
Confidence 76666543322222 22688888888888877776542110 0122 34666
Q ss_pred EeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccc--cCCccccccCCCcEEEcCCC
Q 003156 257 LDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYG--SIPQEVCESRSLGILQLDGN 334 (843)
Q Consensus 257 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~N 334 (843)
|++++|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++|++++ .+|..+..+++|++|++++|
T Consensus 307 L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N 384 (520)
T 2z7x_B 307 FTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN 384 (520)
T ss_dssp EEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSS
T ss_pred EEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCC
Confidence 666666655221 12678999999999999999889999999999999999999996 55678999999999999999
Q ss_pred CCCCCchh-hhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecCC
Q 003156 335 SLTGPIPQ-VIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLP 413 (843)
Q Consensus 335 ~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 413 (843)
.+++.+|. .|..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|++++|++++..+
T Consensus 385 ~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~ 461 (520)
T 2z7x_B 385 SVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPD 461 (520)
T ss_dssp CCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCT
T ss_pred cCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCH
Confidence 99985665 488899999999999999988888775 79999999999999 889988899999999999999995433
Q ss_pred C-CCCCCCCCCCCcCCCCCCCC
Q 003156 414 V-GGVFPTLDQSSLQGNLGICS 434 (843)
Q Consensus 414 ~-~~~~~~~~~~~~~~n~~~c~ 434 (843)
. ...++.+....+.+|+..|.
T Consensus 462 ~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 462 GIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp TTTTTCTTCCEEECCSSCBCCC
T ss_pred HHhccCCcccEEECcCCCCccc
Confidence 3 45567788889999998775
No 34
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.4e-44 Score=415.56 Aligned_cols=410 Identities=24% Similarity=0.271 Sum_probs=224.0
Q ss_pred EecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEec
Q 003156 7 LDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDL 86 (843)
Q Consensus 7 L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L 86 (843)
.|+++|+++ .+|..++ ++|++|+|++|.|+++.+..|.++++|++|+|++|++++.++ ..|..+++|++|+|
T Consensus 10 c~~~~~~l~-~ip~~~~---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~----~~~~~l~~L~~L~L 81 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT---AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG----DAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSCCS-SCCSCCC---TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT----TTTTTCTTCCEEEC
T ss_pred EECCCCccc-cccccCC---CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh----hhccccccCCEEEC
Confidence 344555555 4554332 445555555555555544455555555555555555543221 23445555555555
Q ss_pred CCccCcccCchhhhcCCCCCEEEcCCCccccc-CCCCCCCCCCCcEEEccCCc-ccccCCchhhcccCCcEEEeecCccc
Q 003156 87 SHNLFSGSIPQGVAALHYLKELLLQGNQFSGP-LPADIGFCPHLTTLDLSNNL-FTGQLPVSLRLLNSMIFISVSNNTLT 164 (843)
Q Consensus 87 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~ 164 (843)
++|++++..+..|.++++|++|+|++|.+++. .|..++++++|++|++++|. +....+..|..+++|++|++++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 55555544444455555555555555555432 23445555555555555554 23222344555555555555555555
Q ss_pred ccCCCCccCC------------------------CCccEEEcccCCcCCCC--C-CCCCCCCCCcEEEecCCcCCCCCCc
Q 003156 165 GDIPHWIGNI------------------------STLEFLDFSNNHLTGSL--P-SSLFNCKKLSVIRLRGNSLNGNIPE 217 (843)
Q Consensus 165 ~~~p~~~~~l------------------------~~L~~L~L~~N~i~~~~--~-~~~~~l~~L~~L~L~~N~l~~~~p~ 217 (843)
+..|..++.+ ++|++|++++|++++.. + .....+++|+.|++++|.+++..+.
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred ccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 5455555544 44555555555544321 1 1112234444444444444322222
Q ss_pred hhhc-----cCcceeeccCCcceecCCCCC---------C----------------------------------------
Q 003156 218 GLFD-----LGLEEIDLSENGFMGSIPPGS---------S---------------------------------------- 243 (843)
Q Consensus 218 ~~~~-----~~L~~L~l~~n~l~~~~p~~~---------~---------------------------------------- 243 (843)
.+.. .+++.+++++|.+.+...... .
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~ 321 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSK 321 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSC
T ss_pred HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCc
Confidence 1111 134455555554443110000 0
Q ss_pred ---CC-CcccccCccCEEeCCCCccceeCC---ccccCCCCCcEEEcCCCcccCCCC--CCccccccceEEEccCCcccc
Q 003156 244 ---SS-SSSTLFQTLRILDLSSNNLVGDIP---AEMGLFANLRYLNLSSNHLRSRIP--PELGYFHSLIHLDLRNNALYG 314 (843)
Q Consensus 244 ---~~-~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~n~l~~ 314 (843)
.+ .....+++|++|+|++|++.+.+| ..++.+++|++|++++|++++..+ ..+..+++|++|++++|+++
T Consensus 322 l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~- 400 (549)
T 2z81_A 322 VFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH- 400 (549)
T ss_dssp CCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-
T ss_pred cccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-
Confidence 00 000235566666666666665442 235556666666666666654322 33556666666666666666
Q ss_pred cCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhc
Q 003156 315 SIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGK 394 (843)
Q Consensus 315 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 394 (843)
.+|..+..+++|++|++++|.+++ +|..+ .++|+.|+|++|+|++. +..+++|++|+|++|+|+ .+|. ...
T Consensus 401 ~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~----~~~l~~L~~L~Ls~N~l~-~ip~-~~~ 471 (549)
T 2z81_A 401 PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSF----SLFLPRLQELYISRNKLK-TLPD-ASL 471 (549)
T ss_dssp CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCC----CCCCTTCCEEECCSSCCS-SCCC-GGG
T ss_pred cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhh----cccCChhcEEECCCCccC-cCCC-ccc
Confidence 456666666666666666666652 33322 24666777777766643 247889999999999998 6776 567
Q ss_pred ccccceEeeccccceecCCC-CCCCCCCCCCCcCCCCCCCC
Q 003156 395 LASLLAVNVSYNRLIGRLPV-GGVFPTLDQSSLQGNLGICS 434 (843)
Q Consensus 395 l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~ 434 (843)
+++|+.|+|++|++++.+|. .+.++.+....+.+|++.|.
T Consensus 472 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 472 FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 89999999999999998885 35678888889999998775
No 35
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.5e-43 Score=398.06 Aligned_cols=385 Identities=20% Similarity=0.163 Sum_probs=325.4
Q ss_pred cEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEE
Q 003156 5 KFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTL 84 (843)
Q Consensus 5 ~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L 84 (843)
+.++.++++++ .+|. + .++|++|+|++|.|.++.+..|.++++|++|+|++|.+.+. +.+..|..+++|++|
T Consensus 13 ~~~~c~~~~l~-~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~---i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 13 YNAICINRGLH-QVPE--L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV---IRNNTFRGLSSLIIL 84 (455)
T ss_dssp TEEECCSSCCS-SCCC--C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE---ECTTTTTTCTTCCEE
T ss_pred cccCcCCCCcc-cCCC--C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce---ECcccccccccCCEE
Confidence 56889999998 8886 2 38999999999999999899999999999999999998643 223468899999999
Q ss_pred ecCCccCcccCchhhhcCCCCCEEEcCCCcccccCC--CCCCCCCCCcEEEccCCcccccCCch-hhcccCCcEEEeecC
Q 003156 85 DLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLP--ADIGFCPHLTTLDLSNNLFTGQLPVS-LRLLNSMIFISVSNN 161 (843)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N 161 (843)
+|++|++.+..|..|.++++|++|+|++|.+++..+ ..|..+++|++|+|++|.+++..|.. |..+++|++|++++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 999999998889999999999999999999987444 34899999999999999999887876 899999999999999
Q ss_pred cccccCCCCccCC--CCccEEEcccCCcCCCCCCC--------CCCCCCCcEEEecCCcCCCCCCchhhc----cCccee
Q 003156 162 TLTGDIPHWIGNI--STLEFLDFSNNHLTGSLPSS--------LFNCKKLSVIRLRGNSLNGNIPEGLFD----LGLEEI 227 (843)
Q Consensus 162 ~l~~~~p~~~~~l--~~L~~L~L~~N~i~~~~~~~--------~~~l~~L~~L~L~~N~l~~~~p~~~~~----~~L~~L 227 (843)
++.+..+..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|++++|.+++..|..+.. .+++.|
T Consensus 165 ~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 165 KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp CBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEE
T ss_pred cccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeE
Confidence 9999889888877 78999999999999655443 346789999999999999877777665 357888
Q ss_pred eccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccC--CCCCcEEEcCCCcccCCCCCCccccccceEE
Q 003156 228 DLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGL--FANLRYLNLSSNHLRSRIPPELGYFHSLIHL 305 (843)
Q Consensus 228 ~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 305 (843)
++++|.+.+.. +..+.+.+..+..+.. .++|++|++++|.+.+..|..|..+++|++|
T Consensus 245 ~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 304 (455)
T 3v47_A 245 ILSNSYNMGSS--------------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQL 304 (455)
T ss_dssp ECTTCTTTSCC--------------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred eeccccccccc--------------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEE
Confidence 88887765321 1122222222233332 3688999999999988888888889999999
Q ss_pred EccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc
Q 003156 306 DLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 306 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
+|++|++++..|..|..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|+|+
T Consensus 305 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccc
Confidence 99999999888888999999999999999998888889999999999999999999888999999999999999999999
Q ss_pred ccCCcchhcccccceEeeccccceecCCCCCC
Q 003156 386 GEIPQELGKLASLLAVNVSYNRLIGRLPVGGV 417 (843)
Q Consensus 386 ~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~ 417 (843)
+..+..+..+++|+.|++++|++++.+|...+
T Consensus 385 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 416 (455)
T 3v47_A 385 SVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 416 (455)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred cCCHhHhccCCcccEEEccCCCcccCCCcchH
Confidence 77777889999999999999999999885443
No 36
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.6e-44 Score=407.05 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=204.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHH---HHHHHhccCCCccceeeEEEcCCeeE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFERE---VRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E---~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
+.|+..+.||+|+||+||+|+...+|+.||||++.+... ......+.+| +.+++.++|||||++++++.+++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 457778899999999999999999999999999965422 1222334444 56667778999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+|||||+||+|.++|... ..+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 999999999999999875 4699999999999999999999998 999999999999999999999999999987
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
+.... .....||+.|||||++..+..|+.++||||+||++|||++|+.||........ ....+.... ..
T Consensus 342 ~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i~~-~~---- 410 (689)
T 3v5w_A 342 FSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT-MA---- 410 (689)
T ss_dssp CSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHHHH-CC----
T ss_pred cCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhhcC-CC----
Confidence 65422 24568999999999985566799999999999999999999999975322211 111111111 11
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPS-----MAEVVQI 828 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs-----~~evl~~ 828 (843)
..++.....++.+++.+|++.||++|++ ++||++|
T Consensus 411 -----~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 411 -----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -----CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1234455667889999999999999998 7888765
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.1e-44 Score=409.85 Aligned_cols=387 Identities=22% Similarity=0.274 Sum_probs=325.4
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
++|++|+|++|+|+ .+++..|.++++|++|+|++|+|.++.+..|.++++|++|+|++|+|++.+.. .+++|
T Consensus 21 ~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~-------~l~~L 92 (520)
T 2z7x_B 21 QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH-------PTVNL 92 (520)
T ss_dssp TTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC-------CCCCC
T ss_pred ccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc-------ccCCc
Confidence 47999999999999 67777899999999999999999999999999999999999999999965442 68999
Q ss_pred CEEecCCccCcc-cCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCC--cEEEccCCcc--cccCCchhhc-------
Q 003156 82 RTLDLSHNLFSG-SIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHL--TTLDLSNNLF--TGQLPVSLRL------- 149 (843)
Q Consensus 82 ~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~------- 149 (843)
++|+|++|++++ ..|..|+.+++|++|+|++|.+++ ..+..+++| ++|++++|.+ .+..|..+..
T Consensus 93 ~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~ 169 (520)
T 2z7x_B 93 KHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLH 169 (520)
T ss_dssp SEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEE
T ss_pred cEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEE
Confidence 999999999986 468899999999999999999985 356777778 9999999998 5556655544
Q ss_pred -------------------ccCCcEEEeecCc-------ccccCCCCccC---------------------------CCC
Q 003156 150 -------------------LNSMIFISVSNNT-------LTGDIPHWIGN---------------------------IST 176 (843)
Q Consensus 150 -------------------l~~L~~L~L~~N~-------l~~~~p~~~~~---------------------------l~~ 176 (843)
+++|+.|++++|. +.+.+| .++. +++
T Consensus 170 l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~ 248 (520)
T 2z7x_B 170 IVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTT 248 (520)
T ss_dssp EECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSS
T ss_pred EEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCc
Confidence 4556666666664 222222 2222 237
Q ss_pred ccEEEcccCCcCCCCCCCC-----CCCCCCcEEEecCCcCCCCCC-chhhc----cCcceeeccCCcceecCCCCCCCCC
Q 003156 177 LEFLDFSNNHLTGSLPSSL-----FNCKKLSVIRLRGNSLNGNIP-EGLFD----LGLEEIDLSENGFMGSIPPGSSSSS 246 (843)
Q Consensus 177 L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~----~~L~~L~l~~n~l~~~~p~~~~~~~ 246 (843)
|++|++++|++++.+|..+ ..+++|+.+++++|.+ .+| ..+.. .+++.|++++|.+.+...
T Consensus 249 L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~------- 319 (520)
T 2z7x_B 249 VWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLC------- 319 (520)
T ss_dssp CSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCC-------
T ss_pred ccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccc-------
Confidence 8888888888888888888 8899999999999998 566 34433 369999999998864211
Q ss_pred cccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccC--CCCCCccccccceEEEccCCcccccCCc-ccccc
Q 003156 247 SSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRS--RIPPELGYFHSLIHLDLRNNALYGSIPQ-EVCES 323 (843)
Q Consensus 247 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l 323 (843)
...+++|++|++++|++++..|..++.+++|++|++++|++++ ..|..+..+++|++|++++|++++.+|. .+..+
T Consensus 320 -~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l 398 (520)
T 2z7x_B 320 -PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWT 398 (520)
T ss_dssp -CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCC
T ss_pred -hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccC
Confidence 1357899999999999998899999999999999999999986 3456789999999999999999975665 48889
Q ss_pred CCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcc-hhcccccceEe
Q 003156 324 RSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQE-LGKLASLLAVN 402 (843)
Q Consensus 324 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~l~ 402 (843)
++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+++|+.|+
T Consensus 399 ~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~ 474 (520)
T 2z7x_B 399 KSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIW 474 (520)
T ss_dssp TTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEE
Confidence 9999999999999988887665 79999999999999 88988889999999999999999 56554 99999999999
Q ss_pred eccccceecCCC
Q 003156 403 VSYNRLIGRLPV 414 (843)
Q Consensus 403 ls~N~l~~~~p~ 414 (843)
+++|++++..+.
T Consensus 475 l~~N~~~c~c~~ 486 (520)
T 2z7x_B 475 LHTNPWDCSCPR 486 (520)
T ss_dssp CCSSCBCCCHHH
T ss_pred CcCCCCcccCCc
Confidence 999999987763
No 38
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.5e-44 Score=384.65 Aligned_cols=277 Identities=38% Similarity=0.671 Sum_probs=231.2
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+.|+..+.||+|+||.||+|.+. +|+.||||++...........+.+|++++++++||||+++++++.+++..++|||
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 107 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 107 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEE
T ss_pred hhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEE
Confidence 345677789999999999999875 7899999998765544444579999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.++++........++|..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 108 YMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred eccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 99999999999987666677999999999999999999999987789999999999999999999999999999876543
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcC---CCCchhhHHHHHHHHHhhCCccccc
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEY---GEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~---~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
.... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||.. ..........++.............
T Consensus 188 ~~~~-~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (326)
T 3uim_A 188 DTHV-TTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALV 265 (326)
T ss_dssp SSCE-ECCCCSCGGGCCHHHH-HHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSS
T ss_pred cccc-cccccCCcCccCHHHh-ccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhc
Confidence 3322 2455689999999988 555689999999999999999999999963 2233334555655555555555666
Q ss_pred CCCCCC-CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhc
Q 003156 790 DPSMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVI 832 (843)
Q Consensus 790 d~~l~~-~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~ 832 (843)
+..... .+......+.+++.+||+.||++|||++|++++|+..
T Consensus 266 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 266 DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp CTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred ChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 665544 6778889999999999999999999999999999874
No 39
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.3e-43 Score=420.41 Aligned_cols=393 Identities=21% Similarity=0.247 Sum_probs=338.2
Q ss_pred CCCcEEEccCccccccccccccCCCCCCEEEC-CCCCCccccCCC-----------------------------------
Q 003156 27 ASLRYLSLAGNILQGPIGKIFNYCSSLNTLNL-SNNHFSGDLDFA----------------------------------- 70 (843)
Q Consensus 27 ~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L-s~N~i~~~~~~~----------------------------------- 70 (843)
..++.|+|++|++.+..+..|.+|++|++|+| ++|.+++.....
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999888888999999999999 888765431100
Q ss_pred -------------------------------------cCccccCCccCCEEecCCccCcc-----------------cCc
Q 003156 71 -------------------------------------SGYGIWSLKRLRTLDLSHNLFSG-----------------SIP 96 (843)
Q Consensus 71 -------------------------------------~~~~~~~l~~L~~L~L~~n~l~~-----------------~~~ 96 (843)
.+..|..+++|++|+|++|++++ .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 23468889999999999999997 378
Q ss_pred hhhh--cCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCc-ccc-cCCchhhccc-------CCcEEEeecCcccc
Q 003156 97 QGVA--ALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNL-FTG-QLPVSLRLLN-------SMIFISVSNNTLTG 165 (843)
Q Consensus 97 ~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~ 165 (843)
..+. .+++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+..++ +|+.|+|++|+++
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~- 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE- 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-
Confidence 8876 99999999999999999999999999999999999998 987 7888888776 9999999999999
Q ss_pred cCCC--CccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-C-cceeeccCCcceecCCCC
Q 003156 166 DIPH--WIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-G-LEEIDLSENGFMGSIPPG 241 (843)
Q Consensus 166 ~~p~--~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~-L~~L~l~~n~l~~~~p~~ 241 (843)
.+|. .|+++++|++|+|++|+++ .+| .|..+++|+.|+|++|.++ .+|..+... + |+.|++++|.+. .+|..
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~ 637 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI 637 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC
T ss_pred ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh
Confidence 8888 8999999999999999999 778 8999999999999999999 888888776 6 999999999998 66654
Q ss_pred CCCCCcccccCccCEEeCCCCccceeCCccc---c--CCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccC
Q 003156 242 SSSSSSSTLFQTLRILDLSSNNLVGDIPAEM---G--LFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSI 316 (843)
Q Consensus 242 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 316 (843)
... ...++|+.|+|++|++.+.+|... . .+++|+.|+|++|.++.+.+..+..+++|+.|+|++|+|+ .+
T Consensus 638 ~~~----~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~i 712 (876)
T 4ecn_A 638 FNA----KSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SI 712 (876)
T ss_dssp CCT----TCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CC
T ss_pred hhc----cccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-cc
Confidence 321 123459999999999998766433 2 3358999999999999654445568899999999999999 66
Q ss_pred Ccccccc--------CCCcEEEcCCCCCCCCchhhhc--ccCCCcEEecccccccccCCccccCCCCCCEEEccC-----
Q 003156 317 PQEVCES--------RSLGILQLDGNSLTGPIPQVIR--NCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEF----- 381 (843)
Q Consensus 317 ~~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~----- 381 (843)
|..+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+.|+|++
T Consensus 713 p~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls 790 (876)
T 4ecn_A 713 PENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAE 790 (876)
T ss_dssp CTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTT
T ss_pred ChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcc
Confidence 6655443 39999999999999 7888887 99999999999999996 899999999999999976
Q ss_pred -CcccccCCcchhcccccceEeeccccceecCCCCCCCCCCCCCCcCCCCCCC
Q 003156 382 -NELSGEIPQELGKLASLLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGIC 433 (843)
Q Consensus 382 -N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c 433 (843)
|++.+.+|..+.++++|+.|+|++|++ +.+|.. .++.+....+.+|+...
T Consensus 791 ~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 791 GNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPNIS 841 (876)
T ss_dssp CCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTTCE
T ss_pred cccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCCCc
Confidence 889999999999999999999999999 888864 44678888888997654
No 40
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.8e-43 Score=378.09 Aligned_cols=276 Identities=33% Similarity=0.543 Sum_probs=231.0
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+.|+..+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 38 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (321)
T 2qkw_B 38 TNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115 (321)
T ss_dssp CCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEE
T ss_pred HhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEE
Confidence 345677889999999999999975 78999999885543 2345788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++.........++|..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 192 (321)
T 2qkw_B 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192 (321)
T ss_dssp CCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSS
T ss_pred cCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999987644455799999999999999999999998 9999999999999999999999999999875543
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCC-chhhHHHHHHHHHhhCCcccccCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGED-NVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~-~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
..........||..|+|||++ .+..++.++|||||||++|||++|+.||..... .......|.......+.....+++
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (321)
T 2qkw_B 193 DQTHLSTVVKGTLGYIDPEYF-IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271 (321)
T ss_dssp SCCCCBCCCEEETTTCCHHHH-HHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSS
T ss_pred cccccccccCCCccccCHHHh-cCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcCh
Confidence 333333455689999999987 455789999999999999999999999975432 223344455555555666666776
Q ss_pred CCCC-CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 792 SMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 792 ~l~~-~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
.... .+.+....+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 272 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 272 NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 6544 677888899999999999999999999999999998754
No 41
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.6e-43 Score=404.66 Aligned_cols=252 Identities=22% Similarity=0.342 Sum_probs=207.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.++.+|+.||+|.+..... ...+.+.+|+.+|+.++|||||++++++.++...++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 457788899999999999999999999999999865432 2346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC--CCcEEeeccCcccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN--YNPRISDFGLARLLTR 711 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfgl~~~~~~ 711 (843)
|++|+|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 236 ~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 9999999999754 34689999999999999999999999 99999999999999854 8999999999998764
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.... ....||+.|||||++ .+..|+.++||||+||++|||++|+.||..... ... .... .....
T Consensus 310 ~~~~---~~~~GT~~y~APEv~-~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-~~~----~~~i-~~~~~------ 373 (573)
T 3uto_A 310 KQSV---KVTTGTAEFAAPEVA-EGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-DET----LRNV-KSCDW------ 373 (573)
T ss_dssp TSEE---EEECSSGGGCCHHHH-TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHH----HHHH-HTTCC------
T ss_pred CCce---eeeEECccccCHHHh-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHH----HHHH-HhCCC------
Confidence 3322 345799999999998 556789999999999999999999999975422 111 1111 11111
Q ss_pred CCCC-CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 792 SMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 792 ~l~~-~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.... .......++.+|+.+||+.||++|||+.|+++|
T Consensus 374 ~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 374 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1111 122345568899999999999999999999986
No 42
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.2e-42 Score=400.32 Aligned_cols=383 Identities=22% Similarity=0.249 Sum_probs=227.3
Q ss_pred ccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCE
Q 003156 4 MKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRT 83 (843)
Q Consensus 4 l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~ 83 (843)
.+++++++|+++ .+|...+ ++|++|+|++|.|.++++..|.++++|++|+|++|+|++..+ ..|..+++|++
T Consensus 33 ~~~l~ls~~~L~-~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~ 104 (562)
T 3a79_B 33 ESMVDYSNRNLT-HVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDF----HVFLFNQDLEY 104 (562)
T ss_dssp CCEEECTTSCCC-SCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECT----TTTTTCTTCCE
T ss_pred CcEEEcCCCCCc-cCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCH----HHhCCCCCCCE
Confidence 367888888887 6776543 678888888888888777778888888888888888775432 35777788888
Q ss_pred EecCCccCcccCchhhhcCCCCCEEEcCCCccccc-CCCCCCCCCCCcEEEccCCcccccCCchhhcccCC--cEEEeec
Q 003156 84 LDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGP-LPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSM--IFISVSN 160 (843)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~ 160 (843)
|+|++|+|+. +|.. .+++|++|+|++|++++. .|..|+++++|++|++++|.++.. .+..+++| +.|++++
T Consensus 105 L~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~ 178 (562)
T 3a79_B 105 LDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDL 178 (562)
T ss_dssp EECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEE
T ss_pred EECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeec
Confidence 8888888874 4444 778888888888888753 356777888888888888887742 44455555 8888888
Q ss_pred Ccc--cccCCCCccCCC--------------------------CccEEEcccCCc-------------------------
Q 003156 161 NTL--TGDIPHWIGNIS--------------------------TLEFLDFSNNHL------------------------- 187 (843)
Q Consensus 161 N~l--~~~~p~~~~~l~--------------------------~L~~L~L~~N~i------------------------- 187 (843)
|++ ++..|..|..+. +|+.|++++|+.
T Consensus 179 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~ 258 (562)
T 3a79_B 179 VSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQH 258 (562)
T ss_dssp SSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEE
T ss_pred ccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecC
Confidence 877 656665555432 333333333320
Q ss_pred ---CC----CCCCCCCCCCCCcEEEecCCcCCCCCCchhhc--------------------------------cCcceee
Q 003156 188 ---TG----SLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFD--------------------------------LGLEEID 228 (843)
Q Consensus 188 ---~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------------------------------~~L~~L~ 228 (843)
.+ ..+.. ...++|++|++++|.+++.+|..++. .+++.|+
T Consensus 259 ~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~ 337 (562)
T 3a79_B 259 IETTWKCSVKLFQF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLS 337 (562)
T ss_dssp EEECHHHHHHHHHH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEE
T ss_pred CcCcHHHHHHHHHh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEE
Confidence 00 00000 01124555555555555555544421 2355555
Q ss_pred ccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCC--CCCccccccceEEE
Q 003156 229 LSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRI--PPELGYFHSLIHLD 306 (843)
Q Consensus 229 l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~ 306 (843)
+++|.+..... ...+++|++|++++|++++..|..++.+++|++|++++|+++++. |..+..+++|++|+
T Consensus 338 l~~n~~~~~~~--------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ 409 (562)
T 3a79_B 338 ISDTPFIHMVC--------PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLD 409 (562)
T ss_dssp EESSCCCCCCC--------CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEE
T ss_pred ccCCCcccccC--------ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEE
Confidence 55555432110 023455666666666666555555666666666666666665432 23455556666666
Q ss_pred ccCCcccccCCc-cccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc
Q 003156 307 LRNNALYGSIPQ-EVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 307 L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
+++|++++.+|. .+..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+
T Consensus 410 l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 410 VSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp CTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC
T ss_pred CCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC
Confidence 666666553332 355556666666666666554444332 45666666666665 45555556666666666666666
Q ss_pred ccCCcc-hhcccccceEeeccccceecCC
Q 003156 386 GEIPQE-LGKLASLLAVNVSYNRLIGRLP 413 (843)
Q Consensus 386 ~~~p~~-~~~l~~L~~l~ls~N~l~~~~p 413 (843)
.+|.. +..+++|+.|++++|++.+..|
T Consensus 487 -~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 487 -SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp -CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred -CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 33333 5556666666666666655544
No 43
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-42 Score=403.49 Aligned_cols=394 Identities=23% Similarity=0.255 Sum_probs=297.6
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
++|++|+|++|+|+ .+++..|.++++|++|+|++|.|.++++..|.++++|++|+|++|++++.++ ..|..+++|
T Consensus 26 ~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~----~~~~~l~~L 100 (549)
T 2z81_A 26 AAMKSLDLSFNKIT-YIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS----SWFGPLSSL 100 (549)
T ss_dssp TTCCEEECCSSCCC-EECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH----HHHTTCTTC
T ss_pred CCccEEECcCCccC-ccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH----HHhccCCCC
Confidence 36788888888887 4555567888888888888888887777778888888888888888775432 346677888
Q ss_pred CEEecCCccCccc-CchhhhcCCCCCEEEcCCCc-ccccCCCCCCCCCCCcEEEccCCcccccCCchhh-----------
Q 003156 82 RTLDLSHNLFSGS-IPQGVAALHYLKELLLQGNQ-FSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLR----------- 148 (843)
Q Consensus 82 ~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----------- 148 (843)
++|+|++|.+++. .|..|..+++|++|++++|. +....+..|..+++|++|++++|.+++..|..+.
T Consensus 101 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 180 (549)
T 2z81_A 101 KYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLH 180 (549)
T ss_dssp CEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEE
T ss_pred cEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecc
Confidence 8888888877652 45667777788888888777 4444445677777777777777777766665554
Q ss_pred -------------cccCCcEEEeecCcccccC--C-CCccCCCCccEEE----------------------------ccc
Q 003156 149 -------------LLNSMIFISVSNNTLTGDI--P-HWIGNISTLEFLD----------------------------FSN 184 (843)
Q Consensus 149 -------------~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L~~L~----------------------------L~~ 184 (843)
.+++|++|++++|++++.. | .....+++|+.|+ +++
T Consensus 181 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~ 260 (549)
T 2z81_A 181 LSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDD 260 (549)
T ss_dssp CSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEES
T ss_pred cCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccc
Confidence 3677888888888887532 1 1122334444444 444
Q ss_pred CCcCCCCC---------CC--------------------------CCCCCCCcEEEecCCcCCCCCCchhh-c-cCccee
Q 003156 185 NHLTGSLP---------SS--------------------------LFNCKKLSVIRLRGNSLNGNIPEGLF-D-LGLEEI 227 (843)
Q Consensus 185 N~i~~~~~---------~~--------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~-~-~~L~~L 227 (843)
|.+.+... .. +....+|+.|++++|.+. .+|..++ . .+|+.|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L 339 (549)
T 2z81_A 261 CTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFL 339 (549)
T ss_dssp CEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEE
T ss_pred ccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEE
Confidence 44332100 00 111356888888888887 7887775 3 379999
Q ss_pred eccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCC--ccccCCCCCcEEEcCCCcccCCCCCCccccccceEE
Q 003156 228 DLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIP--AEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHL 305 (843)
Q Consensus 228 ~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 305 (843)
++++|++.+.+|... .....+++|++|+|++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|
T Consensus 340 ~Ls~N~l~~~~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L 415 (549)
T 2z81_A 340 DLSENLMVEEYLKNS---ACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFL 415 (549)
T ss_dssp ECCSSCCCHHHHHHH---TCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEE
T ss_pred EccCCccccccccch---hhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEE
Confidence 999999987654321 112457899999999999986533 56889999999999999998 467889999999999
Q ss_pred EccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc
Q 003156 306 DLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 306 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
++++|+++ .+|..+ .++|++|+|++|++++.. .++++|+.|+|++|+|+ .+|. ...+++|++|+|++|+|+
T Consensus 416 ~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~ 486 (549)
T 2z81_A 416 NLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLK 486 (549)
T ss_dssp ECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCC
T ss_pred ECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccC
Confidence 99999998 455444 368999999999999643 58999999999999999 6776 578999999999999999
Q ss_pred ccCCcchhcccccceEeeccccceecCCC
Q 003156 386 GEIPQELGKLASLLAVNVSYNRLIGRLPV 414 (843)
Q Consensus 386 ~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 414 (843)
+.+|..+..+++|+.|++++|++++.+|.
T Consensus 487 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 487 SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99999999999999999999999998884
No 44
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.4e-41 Score=401.95 Aligned_cols=420 Identities=23% Similarity=0.194 Sum_probs=322.2
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
+++++|||++|+|+ .+|+..|.++++|++|+|++|+|+++++++|.++++|++|+|++|+|++.++ ..|.++++|
T Consensus 52 ~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~----~~f~~L~~L 126 (635)
T 4g8a_A 52 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL----GAFSGLSSL 126 (635)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECG----GGGTTCTTC
T ss_pred cCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCH----HHhcCCCCC
Confidence 36899999999998 7888889999999999999999999999999999999999999999886543 468889999
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCccccc-CCCCCCCCCCCcEEEccCCcccccCCchhhcccCCc----EE
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGP-LPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMI----FI 156 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L 156 (843)
++|+|++|++++..+..|+++++|++|+|++|.++.. .|..++.+++|++|+|++|++++..+..|..+.+++ .+
T Consensus 127 ~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~ 206 (635)
T 4g8a_A 127 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 206 (635)
T ss_dssp CEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEE
T ss_pred CEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhh
Confidence 9999999999977777899999999999999998754 567788899999999999999988888877666543 56
Q ss_pred EeecCcccccCCCCccCCCCccEEEcc-----------------------------------------------------
Q 003156 157 SVSNNTLTGDIPHWIGNISTLEFLDFS----------------------------------------------------- 183 (843)
Q Consensus 157 ~L~~N~l~~~~p~~~~~l~~L~~L~L~----------------------------------------------------- 183 (843)
+++.|.+....+..+.. ..++.+++.
T Consensus 207 ~ls~n~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~ 285 (635)
T 4g8a_A 207 DLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE 285 (635)
T ss_dssp ECTTCCCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEE
T ss_pred hcccCcccccCcccccc-hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhh
Confidence 66666665333322211 122222222
Q ss_pred -----------------------------cCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchh---------------
Q 003156 184 -----------------------------NNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGL--------------- 219 (843)
Q Consensus 184 -----------------------------~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~--------------- 219 (843)
+|.+... ..+.....|+.|++.+|.+....+..+
T Consensus 286 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~ 363 (635)
T 4g8a_A 286 FRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGN 363 (635)
T ss_dssp EEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCC
T ss_pred hhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCC
Confidence 2222211 123344566667776666653322211
Q ss_pred -----hccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCC-
Q 003156 220 -----FDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIP- 293 (843)
Q Consensus 220 -----~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~- 293 (843)
...+|+.+++++|.+....+. ......+.+|+.+++..|.+. ..+..+..+++|+.+++++|......+
T Consensus 364 ~~~~~~l~~L~~L~ls~n~l~~~~~~----~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~ 438 (635)
T 4g8a_A 364 AFSEVDLPSLEFLDLSRNGLSFKGCC----SQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEF 438 (635)
T ss_dssp BCCCCBCTTCCEEECCSSCCBEEEEC----CHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSS
T ss_pred Ccccccccccccchhhcccccccccc----ccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccc
Confidence 112456666666665422111 011123456777777777776 455667788899999998888766544
Q ss_pred CCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCC-CCCchhhhcccCCCcEEecccccccccCCccccCCC
Q 003156 294 PELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSL-TGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLN 372 (843)
Q Consensus 294 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 372 (843)
..|..+.+++.+++++|.+.+..+..+..++.|+.|++++|.+ .+..|..|..+++|+.|+|++|+|++..|..|.+++
T Consensus 439 ~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~ 518 (635)
T 4g8a_A 439 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 518 (635)
T ss_dssp CTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCC
Confidence 5678899999999999999999899999999999999999974 446788999999999999999999999999999999
Q ss_pred CCCEEEccCCcccccCCcchhcccccceEeeccccceecCCCC-CCC-CCCCCCCcCCCCCCCC
Q 003156 373 KLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVG-GVF-PTLDQSSLQGNLGICS 434 (843)
Q Consensus 373 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~-~~~~~~~~~~n~~~c~ 434 (843)
+|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|.. ..+ .++....+.+||+.|.
T Consensus 519 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 519 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9999999999999999999999999999999999999998853 233 4678888999999985
No 45
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.4e-42 Score=378.50 Aligned_cols=264 Identities=27% Similarity=0.385 Sum_probs=216.0
Q ss_pred hhhhhhcCeeccccceEEEEEEEC-------CCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcC
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFG-------TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTP 624 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 624 (843)
.+.|+..+.||+|+||.||+|.+. .++..||||.+.........+.+.+|+.+++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 456777889999999999999873 245689999996654444456789999999999 899999999999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhcCC------------CCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE
Q 003156 625 QLKLLVSDYAPNGSLQAKLHERLP------------STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL 692 (843)
Q Consensus 625 ~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 692 (843)
+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999987532 124589999999999999999999998 99999999999999
Q ss_pred cCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhh
Q 003156 693 DDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVI 771 (843)
Q Consensus 693 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~ 771 (843)
+.++.+||+|||+++...............+|+.|+|||++ .+..++.++|||||||++|||+| |+.||...... .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~ 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH-HTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHh-cCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 99999999999999876554433333445678899999988 45678999999999999999999 99999754322 1
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 772 LSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 772 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
+.. .+..+. ....+..+..++.+++.+||+.||++|||+.|++++|+.+..
T Consensus 314 ~~~----~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 314 LFK----LLKEGH--------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHH----HHHTTC--------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH----HHhcCC--------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 112221 112345566789999999999999999999999999998754
No 46
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.6e-43 Score=384.38 Aligned_cols=261 Identities=25% Similarity=0.355 Sum_probs=213.2
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+.|+..+.||+|+||.||+|.+..+++.||||.+.........+.|.+|++++++++||||++++|++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 34567778999999999999999888999999998654332333568899999999999999999999999899999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.++++.. ...+++..++.++.|+|.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 99999999999875 34589999999999999999999999 9999999999999999999999999999865432
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
..........+++.|+|||.+ ....++.++|||||||++|||+| |..||...... . +...+..+...
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~----~~~~~~~~~~~----- 334 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEAL-NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--Q----TREFVEKGGRL----- 334 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--H----HHHHHHTTCCC-----
T ss_pred ceeecCCCCCCCcCcCCHhHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--H----HHHHHHcCCCC-----
Confidence 222222233457889999988 45578999999999999999998 99999654321 1 11222222211
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
..+..++..+.++|.+||+.||++|||++++++.|+.+.+
T Consensus 335 ---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 ---PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 2344556778999999999999999999999999998754
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.5e-42 Score=388.21 Aligned_cols=367 Identities=20% Similarity=0.216 Sum_probs=316.5
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCcccc-ccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQ-GPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~-~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
++|++|+|++|+|+ .+++..|.++++|++|+|++|.+. .+++..|.++++|++|+|++|++++.. +..|..+++
T Consensus 30 ~~l~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~ 104 (455)
T 3v47_A 30 AHVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLE----TGAFNGLAN 104 (455)
T ss_dssp TTCCEEECCSSCCC-EECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEEC----TTTTTTCTT
T ss_pred CccCEEEecCCccC-cCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccC----hhhccCccc
Confidence 57999999999999 566677999999999999999997 577888999999999999999998653 346889999
Q ss_pred CCEEecCCccCcccCchh--hhcCCCCCEEEcCCCcccccCCCC-CCCCCCCcEEEccCCcccccCCchhhcc--cCCcE
Q 003156 81 LRTLDLSHNLFSGSIPQG--VAALHYLKELLLQGNQFSGPLPAD-IGFCPHLTTLDLSNNLFTGQLPVSLRLL--NSMIF 155 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~ 155 (843)
|++|+|++|++++..+.. |..+++|++|+|++|.+++..|.. +..+++|++|++++|.+++..+..+..+ .+|+.
T Consensus 105 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~ 184 (455)
T 3v47_A 105 LEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTL 184 (455)
T ss_dssp CCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEE
T ss_pred CCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccc
Confidence 999999999998755544 999999999999999999887776 8899999999999999999999988877 78999
Q ss_pred EEeecCcccccCCCCc--------cCCCCccEEEcccCCcCCCCCCCCCCC---CCCcEEEecCCcCCCCCCchhhccCc
Q 003156 156 ISVSNNTLTGDIPHWI--------GNISTLEFLDFSNNHLTGSLPSSLFNC---KKLSVIRLRGNSLNGNIPEGLFDLGL 224 (843)
Q Consensus 156 L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~i~~~~~~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~~~L 224 (843)
|++++|.+.+..+..+ ..+++|++|+|++|++++..|..+..+ ++|+.|++++|.+.+...
T Consensus 185 L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-------- 256 (455)
T 3v47_A 185 LRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF-------- 256 (455)
T ss_dssp EECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------
T ss_pred cccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc--------
Confidence 9999999987655443 367899999999999998777766544 899999999998764321
Q ss_pred ceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceE
Q 003156 225 EEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIH 304 (843)
Q Consensus 225 ~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 304 (843)
..+.+.+..+.. ......++|+.|++++|.+.+..|..++.+++|++|++++|.+++..|..|..+++|++
T Consensus 257 -----~~~~~~~~~~~~----~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 327 (455)
T 3v47_A 257 -----GHTNFKDPDNFT----FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327 (455)
T ss_dssp -----TCCSSCCCCTTT----TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred -----chhhhccCcccc----cccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCE
Confidence 111111111000 01112468999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcc
Q 003156 305 LDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNEL 384 (843)
Q Consensus 305 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 384 (843)
|+|++|++++..|..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|++
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 99999999988889999999999999999999988899999999999999999999977777889999999999999999
Q ss_pred cccCCc
Q 003156 385 SGEIPQ 390 (843)
Q Consensus 385 ~~~~p~ 390 (843)
++..|.
T Consensus 408 ~~~~~~ 413 (455)
T 3v47_A 408 DCSCPR 413 (455)
T ss_dssp CCCTTT
T ss_pred ccCCCc
Confidence 988873
No 48
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=370.68 Aligned_cols=262 Identities=24% Similarity=0.424 Sum_probs=211.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 44667779999999999999998899999999885432 23456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
+++|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999874 35689999999999999999999999 99999999999999999999999999998764432
Q ss_pred cce------------eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHh
Q 003156 714 KHV------------MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLE 781 (843)
Q Consensus 714 ~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~ 781 (843)
... ......||+.|+|||++ .+..++.++|||||||++|||++|..|+...................
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHh-cCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 211 01145789999999988 56678999999999999999999999986542221111111111111
Q ss_pred hCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 782 EGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 782 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
.. .+..++..+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 242 ~~------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 242 RY------------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HT------------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cc------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 10 1233344688999999999999999999999999988654
No 49
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=370.96 Aligned_cols=255 Identities=22% Similarity=0.280 Sum_probs=202.1
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+.|+..+.||+|+||.||+|.+..+|+.||||++.........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 35577788999999999999999889999999999765544445678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 89 ~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 89 YCPGGELFDYIISQ----DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp CCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred CCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 99999999999875 4589999999999999999999998 9999999999999999999999999999765432
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
... ......||+.|+|||++.....++.++||||+||++|||++|+.||..... . ....... .+..
T Consensus 162 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--~---~~~~~i~-~~~~------- 227 (347)
T 3zgw_A 162 KDY-HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--M---ALYKKIM-RGKY------- 227 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHH-HTCC-------
T ss_pred CCc-cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--H---HHHHHHH-cCCC-------
Confidence 221 224567899999999985554468999999999999999999999965321 1 1111111 1111
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 830 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~ 830 (843)
..+......+.+++.+||+.||++|||++|++++-.
T Consensus 228 --~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 228 --DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred --CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 123344556889999999999999999999998743
No 50
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-41 Score=361.53 Aligned_cols=253 Identities=21% Similarity=0.317 Sum_probs=210.2
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+...|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 4456778889999999999999998899999999986543 234677899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 97 EYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp ECCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ECCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 999999999999874 489999999999999999999999 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||....... . ..........
T Consensus 169 ~~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~----~~~~~~~~~~------ 234 (297)
T 3fxz_A 169 EQS--KRSTMVGTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-A----LYLIATNGTP------ 234 (297)
T ss_dssp TTC--CBCCCCSCGGGCCHHHH-HCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-H----HHHHHHHCSC------
T ss_pred ccc--ccCCccCCcCccChhhh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-H----HHHHHhCCCC------
Confidence 322 22456789999999988 55578999999999999999999999996542211 1 1111111110
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
. ...+......+.+++.+||+.||++|||++|++++
T Consensus 235 ~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 235 E-LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp C-CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C-CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 11245556678999999999999999999999986
No 51
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.6e-41 Score=361.44 Aligned_cols=270 Identities=35% Similarity=0.559 Sum_probs=220.4
Q ss_pred hhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc---ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI---IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+...+.||+|+||.||+|.+ +++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 110 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV 110 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence 44557899999999999997 688999999865321 2234678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 186 (307)
T 2nru_A 111 YMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186 (307)
T ss_dssp CCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred ecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeecccccccccc
Confidence 999999999998642 235689999999999999999999998 9999999999999999999999999999876554
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhh-CCcccccCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEE-GNVLDCVDP 791 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~d~ 791 (843)
..........||..|+|||.+. + .++.++||||||+++|||++|+.||....... .+..+.+..... ....+.+++
T Consensus 187 ~~~~~~~~~~g~~~y~aPE~~~-~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
T 2nru_A 187 AQTVMTSRIVGTTAYMAPEALR-G-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDK 263 (307)
T ss_dssp SSCEECSSCCSCGGGCCHHHHT-T-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHHHHHHTTSCCHHHHSCS
T ss_pred cccccccccCCCcCcCChHHhc-C-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHHHHhhhhhhhhhhhccc
Confidence 4333345567899999999873 3 47899999999999999999999997653322 122222222221 223344566
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
.+...+......+.+++.+||+.||++|||++|++++|+.+..
T Consensus 264 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 6666778888899999999999999999999999999999864
No 52
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-41 Score=363.85 Aligned_cols=263 Identities=30% Similarity=0.457 Sum_probs=203.6
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
+...|+..+.||+|+||.||+|++ +|+.||||.+...... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 345677788999999999999988 5889999998654322 2235788999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCC--eeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPP--IIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
|||+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred EecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 99999999999998642 112489999999999999999999998 7 99999999999999999999999999976
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
..... .......||..|+|||++ .+..++.++|||||||++|||++|+.||....... . ........
T Consensus 189 ~~~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~---~~~~~~~~----- 255 (309)
T 3p86_A 189 KASTF--LSSKSAAGTPEWMAPEVL-RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--V---VAAVGFKC----- 255 (309)
T ss_dssp ---------------CCTTSCHHHH-TTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--H---HHHHHHSC-----
T ss_pred ccccc--cccccCCCCccccChhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--H---HHHHHhcC-----
Confidence 44321 122456789999999988 55678999999999999999999999997543211 1 11111111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
.....+.....++.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 256 ---~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 256 ---KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ---CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ---CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 111234555667899999999999999999999999999886643
No 53
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-42 Score=372.48 Aligned_cols=269 Identities=26% Similarity=0.420 Sum_probs=215.3
Q ss_pred hhhhhhcCeeccccceEEEEEEEC-----CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCee
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFG-----TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLK 627 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 627 (843)
.+.|+..+.||+|+||.||+|.+. .+++.||+|.+.........+.+.+|+.++++++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 355677789999999999999996 345899999997554434456789999999999999999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhcCCC--------------------CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCC
Q 003156 628 LLVSDYAPNGSLQAKLHERLPS--------------------TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKP 687 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 687 (843)
++||||+++|+|.+++...... ...+++.+++.++.|+++||+|||+. +|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence 9999999999999999875321 25799999999999999999999999 999999999
Q ss_pred CCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCC
Q 003156 688 SNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGE 766 (843)
Q Consensus 688 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~ 766 (843)
+||+++.++.+||+|||+++...............+|+.|+|||.+ ....++.++|||||||++|||+| |+.||....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI-FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh-ccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999876544433333456778899999987 45578999999999999999999 999996542
Q ss_pred CchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 003156 767 DNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQR 839 (843)
Q Consensus 767 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~~ 839 (843)
.. . .. ..+..+.. ...+..++.++.+++.+||+.||++|||+.|++++|+.+.......
T Consensus 282 ~~--~---~~-~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 282 HE--E---VI-YYVRDGNI--------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp HH--H---HH-HHHHTTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-----
T ss_pred hH--H---HH-HHHhCCCc--------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhh
Confidence 21 1 11 11222211 1234455678999999999999999999999999999988766544
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.7e-41 Score=364.83 Aligned_cols=250 Identities=23% Similarity=0.292 Sum_probs=207.4
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||++...... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 94 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence 3467778999999999999999889999999999654322 234568899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 95 YASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp CCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred CCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 99999999999875 4589999999999999999999998 9999999999999999999999999999866543
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
.. .....||+.|+|||++......+.++||||+||++|||++|+.||..... . ...... ..+..
T Consensus 168 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~---~~~~~i-~~~~~------- 231 (328)
T 3fe3_A 168 GK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--K---ELRERV-LRGKY------- 231 (328)
T ss_dssp CG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHH-HHCCC-------
T ss_pred Cc---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--H---HHHHHH-HhCCC-------
Confidence 22 24567999999999985554456899999999999999999999965321 1 111111 11211
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+.....++.+++.+||..||++|||++|++++
T Consensus 232 --~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 --RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp --CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred --CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1233455678899999999999999999999986
No 55
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-42 Score=375.41 Aligned_cols=267 Identities=24% Similarity=0.325 Sum_probs=214.8
Q ss_pred cChhhhhhhcCeeccccceEEEEEEEC-----CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC
Q 003156 550 IDPETLLEKAAEVGEGVFGTVYKVSFG-----TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP 624 (843)
Q Consensus 550 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 624 (843)
....+.|+..+.||+|+||.||+|.+. .+++.||||++...........+.+|+.++++++||||+++++++.+.
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 344566778889999999999999953 467789999986544444456788999999999999999999999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhcCC---CCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC---Cc
Q 003156 625 QLKLLVSDYAPNGSLQAKLHERLP---STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY---NP 698 (843)
Q Consensus 625 ~~~~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~ 698 (843)
...++||||+++|+|.+++..... ....+++.+++.++.|+++||+|||+. +|+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceE
Confidence 999999999999999999987542 234689999999999999999999999 999999999999999554 59
Q ss_pred EEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHH
Q 003156 699 RISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVR 777 (843)
Q Consensus 699 kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~ 777 (843)
||+|||+++.+.............+|+.|+|||++ .+..++.++|||||||++|||++ |..||...... . ...
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~---~~~ 297 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E---VLE 297 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H---HHH
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H---HHH
Confidence 99999999876543333333455678999999988 45678999999999999999998 99999654221 1 111
Q ss_pred HHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 778 VLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 778 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
. +..+.. ...+..++..+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 298 ~-i~~~~~--------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 298 F-VTSGGR--------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp H-HHTTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-HHcCCC--------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 1 121111 12244556678999999999999999999999999988754
No 56
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.8e-42 Score=375.88 Aligned_cols=267 Identities=25% Similarity=0.345 Sum_probs=215.0
Q ss_pred hhhhhhhcCeeccccceEEEEEEE-----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCC
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSF-----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQ 625 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 625 (843)
+.+.|+..+.||+|+||.||+|.+ ..+++.||||++.........+.+.+|+++++++ +||||+++++++.+.+
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 345677788999999999999994 4467899999997654444456799999999999 7999999999998765
Q ss_pred e-eEEEEEeCCCCCHHHHHhhcCCC-------------------------------------------------------
Q 003156 626 L-KLLVSDYAPNGSLQAKLHERLPS------------------------------------------------------- 649 (843)
Q Consensus 626 ~-~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 649 (843)
. .++||||+++|+|.++++.....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 4 89999999999999999875321
Q ss_pred -------CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccccceeccccc
Q 003156 650 -------TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQ 722 (843)
Q Consensus 650 -------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~ 722 (843)
...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...............
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 12289999999999999999999999 99999999999999999999999999998765544444445667
Q ss_pred cccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhH
Q 003156 723 SALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEV 801 (843)
Q Consensus 723 g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 801 (843)
||..|+|||++ .+..++.++|||||||++|||+| |+.||.......... . .+..+.. ...+....
T Consensus 257 ~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-~----~~~~~~~--------~~~~~~~~ 322 (359)
T 3vhe_A 257 LPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-R----RLKEGTR--------MRAPDYTT 322 (359)
T ss_dssp ECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH-H----HHHHTCC--------CCCCTTCC
T ss_pred CCceeEChhhh-cCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH-H----HHHcCCC--------CCCCCCCC
Confidence 88999999988 45678999999999999999998 999997654332211 1 1122211 11234455
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 802 LPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 802 ~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
.++.+++.+||+.||++|||+.|++++|+.+.++
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999987543
No 57
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.7e-42 Score=367.94 Aligned_cols=257 Identities=23% Similarity=0.326 Sum_probs=208.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+..+++.||||.+.........+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 45677789999999999999998899999999986555444456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 87 ~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 87 CSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp CTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred CCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 9999999988754 4589999999999999999999998 99999999999999999999999999998765433
Q ss_pred cceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCC
Q 003156 714 KHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSM 793 (843)
Q Consensus 714 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 793 (843)
.........||+.|+|||++.....++.++|||||||++|||++|+.||............+. .....
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~----~~~~~-------- 227 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----EKKTY-------- 227 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH----TTCTT--------
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----ccccc--------
Confidence 333335567899999999985554457899999999999999999999976544333222221 11100
Q ss_pred CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 794 GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 794 ~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
..........+.+++.+||+.||++|||+.|++++-
T Consensus 228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 011234456788999999999999999999999874
No 58
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=366.89 Aligned_cols=262 Identities=25% Similarity=0.388 Sum_probs=211.1
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCC---eEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQG---RMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
...|+..+.||+|+||.||+|.+..++ ..||||.+.........+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 455777889999999999999997444 46999999755444445679999999999999999999999999889999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++|+|.++++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999999764 34689999999999999999999998 9999999999999999999999999999876
Q ss_pred ccccc-ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 710 TRLDK-HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 710 ~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
..... ........+|+.|+|||++ .+..++.++|||||||++|||++ |+.||...... .. ... +..+..
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~---~~~-~~~~~~-- 272 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAI-AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DV---ISS-VEEGYR-- 272 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HH---HHH-HHTTCC--
T ss_pred ccCccceeeccCCCCcccccCHhHh-cCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HH---HHH-HHcCCC--
Confidence 54322 1222334567789999988 55678999999999999999999 99999654221 11 111 111111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
...+..++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 273 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 273 ------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 123445667889999999999999999999999999998654
No 59
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.1e-41 Score=360.12 Aligned_cols=266 Identities=26% Similarity=0.431 Sum_probs=208.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+. ..+|+|.++..... ...+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 44667779999999999999874 35888887643322 23467889999999999999999999875 455789999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 99999999999864 35689999999999999999999998 9999999999999999999999999999865543
Q ss_pred ccceeccccccccccCCccccc--CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 713 DKHVMSNRFQSALGYVAPELTC--QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
..........||+.|+|||++. ....++.++|||||||++|||++|+.||......... .. ....+. ..
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-~~----~~~~~~----~~ 256 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IF----MVGRGY----AS 256 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HH----HHHHTC----CC
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH-HH----HHhcCC----CC
Confidence 3333334567899999999873 2456888999999999999999999999765433221 11 112221 22
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCC
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQ 838 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~ 838 (843)
+.+......++..+.+++.+||+.+|++|||+.|++++|+.++...|+
T Consensus 257 ~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred cchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 333334456667899999999999999999999999999999988875
No 60
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.5e-41 Score=366.45 Aligned_cols=261 Identities=25% Similarity=0.362 Sum_probs=205.0
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeE----EEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCee
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRM----LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLK 627 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 627 (843)
..+.|+..+.||+|+||.||+|.+..+++. ||+|.+.........+.+.+|+.++++++||||+++++++.+.. .
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 345577788999999999999998766654 58888765554456678999999999999999999999998765 6
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
++|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 92 ~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 7999999999999999875 35689999999999999999999998 99999999999999999999999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
...............+|..|+|||.+ .+..++.++|||||||++|||+| |+.||...... .+... +..+..
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~----~~~~~~- 237 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSI----LEKGER- 237 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHH----HHTTCC-
T ss_pred EccCCcccccccCCCccccccChHHh-ccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHH----HHcCCC-
Confidence 77654443333445678899999988 55678999999999999999999 99999754322 12221 121111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 787 DCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 787 ~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
...+..+..++.+++.+||+.+|++|||+.|++++|+.+..
T Consensus 238 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 -------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 12344566689999999999999999999999999988754
No 61
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-41 Score=366.87 Aligned_cols=271 Identities=22% Similarity=0.292 Sum_probs=214.3
Q ss_pred hhhhhhhcCeeccccceEEEEEEE-----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCC
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSF-----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQ 625 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 625 (843)
+.+.|+..+.||+|+||.||+|.+ ..+++.||+|.+.........+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 446677888999999999999997 2356789999997554444567899999999999 8999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCC-------------------CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCC
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPS-------------------TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLK 686 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 686 (843)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999875321 13489999999999999999999998 99999999
Q ss_pred CCCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCC
Q 003156 687 PSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYG 765 (843)
Q Consensus 687 ~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~ 765 (843)
|+||+++.++.+||+|||+++...............+|+.|+|||.+ .+..++.++|||||||++|||+| |..||...
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL-FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh-ccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999877654444444556778899999987 45678999999999999999998 99999765
Q ss_pred CCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 003156 766 EDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQR 839 (843)
Q Consensus 766 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~~ 839 (843)
..... .. .....+.. ...+.....++.+++.+||+.||++|||+.|++++|+.+....+..
T Consensus 279 ~~~~~-~~----~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 279 PVDAN-FY----KLIQNGFK--------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp CCSHH-HH----HHHHTTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred CcHHH-HH----HHHhcCCC--------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 43322 11 11222111 1123445667899999999999999999999999999987765543
No 62
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.7e-42 Score=367.34 Aligned_cols=267 Identities=23% Similarity=0.295 Sum_probs=207.7
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCC----eeEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ----LKLL 629 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~l 629 (843)
..|+..+.||+|+||.||+|++. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 44667779999999999999984 8999999985433 22345667899999999999999999998754 3689
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhc-------CCCCeeecCCCCCCEEEcCCCCcEEee
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHS-------FRPPIIHYNLKPSNILLDDNYNPRISD 702 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------~~~~ivH~dlk~~Nill~~~~~~kl~D 702 (843)
||||+++|+|.++++.. .++|..++.++.|++.||+|||+. +.++|+||||||+||+++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999874 489999999999999999999975 134899999999999999999999999
Q ss_pred ccCcccccccccceeccccccccccCCcccccCc----CCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchh--------
Q 003156 703 FGLARLLTRLDKHVMSNRFQSALGYVAPELTCQS----LRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVV-------- 770 (843)
Q Consensus 703 fgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~-------- 770 (843)
||+++...............||+.|+|||++... ..++.++|||||||++|||+||+.||........
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999877654433333456789999999988442 3456788999999999999999999975422111
Q ss_pred ---hHHHHHHHHHhhCCcccccCCCCCC--CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 771 ---ILSEHVRVLLEEGNVLDCVDPSMGD--YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 771 ---~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
....... ..... ...+.+.. ....+..++.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 255 ~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 255 QHPSLEDMQE-VVVHK----KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp SSCCHHHHHH-HHTTS----CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCchhhhhh-hhhcc----cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111 11111 11222222 123456679999999999999999999999999998753
No 63
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.2e-41 Score=357.03 Aligned_cols=266 Identities=23% Similarity=0.318 Sum_probs=209.7
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
.+.|+..+.||+|+||.||+|.+..+++.||+|.+...... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 34577788999999999999999889999999998654322 2235788999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 9999999999999875 4689999999999999999999998 99999999999999999999999999998765
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
..... ......||+.|+|||.+ .+..++.++||||+||++|||+||+.||........ ........ . .
T Consensus 163 ~~~~~-~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----~~~~~~~~-~----~ 230 (294)
T 4eqm_A 163 ETSLT-QTNHVLGTVQYFSPEQA-KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-----AIKHIQDS-V----P 230 (294)
T ss_dssp -------------CCSSCCHHHH-HTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-----HHHHHSSC-C----C
T ss_pred ccccc-ccCccccCccccCHhHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-----HHHHhhcc-C----C
Confidence 42221 22445689999999988 555789999999999999999999999975432111 11111110 0 0
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHhccCCCC
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRP-SMAEVVQILQVIKTPLP 837 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RP-s~~evl~~L~~~~~~~~ 837 (843)
........+.+..+.+++.+|++.||++|| +++++.+.|+.+.....
T Consensus 231 ~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 231 NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 000112344556789999999999999998 99999999998865543
No 64
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=356.23 Aligned_cols=273 Identities=20% Similarity=0.249 Sum_probs=217.2
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCC--eeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ--LKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|.+..+++.||||++.........+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 456777899999999999999998899999999976555556678899999999999999999999998765 679999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE----cCCCCcEEeeccCcc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL----DDNYNPRISDFGLAR 707 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl~~ 707 (843)
||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 9999999999998752 223489999999999999999999999 99999999999999 778889999999998
Q ss_pred cccccccceeccccccccccCCcccccC-------cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQ-------SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
........ ....||..|+|||++.. ...++.++|||||||++|||++|+.||.......... ..+....
T Consensus 165 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~ 240 (319)
T 4euu_A 165 ELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYKII 240 (319)
T ss_dssp ECCTTCCB---CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH-HHHHHHH
T ss_pred ecCCCCce---eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH-HHHHHHh
Confidence 76543322 34568999999998732 4578999999999999999999999997543322222 2222222
Q ss_pred hhCC---cccc-------c--C---CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 781 EEGN---VLDC-------V--D---PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 781 ~~~~---~~~~-------~--d---~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
.... .... + . +............+.+++.+|++.||++|||++|++++.....-
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 2111 0000 0 0 11112456777889999999999999999999999999877543
No 65
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=370.14 Aligned_cols=266 Identities=27% Similarity=0.374 Sum_probs=217.0
Q ss_pred hhhhhhhcCeeccccceEEEEEEECC-------CCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEc
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGT-------QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWT 623 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~ 623 (843)
..+.|+..+.||+|+||.||+|++.. .+..||||++.........+.+.+|+++++++ +||||+++++++.+
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 34567778899999999999999742 34689999997654444456789999999999 89999999999999
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhcCCC------------CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEE
Q 003156 624 PQLKLLVSDYAPNGSLQAKLHERLPS------------TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNIL 691 (843)
Q Consensus 624 ~~~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 691 (843)
.+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 99999999999999999999876421 24589999999999999999999998 9999999999999
Q ss_pred EcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchh
Q 003156 692 LDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVV 770 (843)
Q Consensus 692 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~ 770 (843)
++.++.+||+|||+++...............+|..|+|||++ .+..++.++|||||||++|||++ |+.||..... .
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~ 300 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--E 300 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH-HSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHh-cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--H
Confidence 999999999999999877654433333455678899999988 45678999999999999999999 9999965422 1
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 771 ILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 771 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
+..+ .+..+.. ...+..+..++.+++.+||+.||++|||++|++++|+++...
T Consensus 301 ---~~~~-~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 301 ---ELFK-LLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp ---HHHH-HHHTTCC--------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHH-HHHcCCC--------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1111 1222211 122445566789999999999999999999999999988543
No 66
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.7e-41 Score=350.34 Aligned_cols=258 Identities=22% Similarity=0.377 Sum_probs=211.3
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+.|+..+.||+|+||.||+|.+. ++..||+|.+.... ...+++.+|++++++++||||+++++++.+....++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 345677789999999999999987 67889999986543 235779999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 99999999999875 34589999999999999999999998 9999999999999999999999999999876543
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.. .......+|..|+|||.+ ....++.++||||+|+++|||++ |+.||....... .... ...+..
T Consensus 158 ~~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~-~~~~~~------ 223 (268)
T 3sxs_A 158 QY-VSSVGTKFPVKWSAPEVF-HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-----VVLK-VSQGHR------ 223 (268)
T ss_dssp CE-EECCSCCCCGGGCCHHHH-HHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHH-HHTTCC------
T ss_pred hh-hcccCCCcCcccCCHHHH-hccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-----HHHH-HHcCCC------
Confidence 22 222445567789999988 55568999999999999999999 999996543211 1111 111111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
...+...+..+.+++.+||+.||++|||+.|++++|+.+++.
T Consensus 224 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 --LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp --CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred --CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 112333455788999999999999999999999999998653
No 67
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-41 Score=361.33 Aligned_cols=250 Identities=24% Similarity=0.310 Sum_probs=207.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC--cccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD--IIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|.+..+++.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 44677789999999999999998899999999986432 1223467899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+ +|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 89 E~~-~g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 78999998875 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... .....||+.|+|||++......+.++||||+||++|||++|+.||....... ....+..
T Consensus 161 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---------------~~~~i~~ 222 (336)
T 3h4j_B 161 GNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---------------LFKKVNS 222 (336)
T ss_dssp SBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT---------------CBCCCCS
T ss_pred Ccc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH---------------HHHHHHc
Confidence 332 2445789999999998554445789999999999999999999997532211 1111222
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
.....+......+.+++.+||+.||++|||++|++++-
T Consensus 223 ~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 22234555667789999999999999999999999864
No 68
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.8e-41 Score=359.02 Aligned_cols=269 Identities=24% Similarity=0.384 Sum_probs=207.7
Q ss_pred hhhhhhcCeeccccceEEEEEEE----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC--Ce
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSF----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP--QL 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~ 626 (843)
...|+..+.||+|+||.||+|++ ..+++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 45577788999999999999994 4578999999986433 23346789999999999999999999999654 45
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred eEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 79999999999999999875 24589999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccc-eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCc----------hhhHHHH
Q 003156 707 RLLTRLDKH-VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDN----------VVILSEH 775 (843)
Q Consensus 707 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~----------~~~l~~~ 775 (843)
+........ .......++..|+|||.+ .+..++.++||||||+++|||+||..|+...... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESL-TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp C-------------CTTCGGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHh-cCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 876543321 222344577889999988 5567899999999999999999999998642110 0111111
Q ss_pred HHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCC
Q 003156 776 VRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 837 (843)
Q Consensus 776 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~ 837 (843)
.......+. ....+..++.++.+++.+||+.||++|||+.|+++.|+.+.+..+
T Consensus 241 ~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 241 LIELLKNNG--------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp HHHHHHTTC--------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHhccC--------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 111122111 112345666789999999999999999999999999999876543
No 69
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5e-41 Score=351.93 Aligned_cols=256 Identities=25% Similarity=0.371 Sum_probs=210.7
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 44667779999999999999997 68889999986543 2357899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 87 MEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp CTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 9999999999764 34689999999999999999999998 99999999999999999999999999998765422
Q ss_pred cceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 714 KHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 714 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
. .......+|..|+|||.+ ....++.++||||+|+++|||++ |+.||...... ...... ..+.
T Consensus 161 ~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~~-~~~~-------- 224 (269)
T 4hcu_A 161 Y-TSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDI-STGF-------- 224 (269)
T ss_dssp H-HSTTSTTCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHH-HTTC--------
T ss_pred c-ccccCcccccccCCHHHh-cCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHH-hcCc--------
Confidence 2 122345567889999988 55678999999999999999999 99999653221 111111 1111
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
....+......+.+++.+||+.||++|||++|++++|+.+.+
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 225 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 111233445678899999999999999999999999998764
No 70
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.5e-41 Score=370.56 Aligned_cols=259 Identities=25% Similarity=0.403 Sum_probs=198.9
Q ss_pred hhhhhcCeeccccceEEEEEEEC---CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFG---TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
..|+..+.||+|+||.||+|++. .++..||||.+.........+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 45677789999999999999986 357789999986554333456799999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 125 ~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999999864 35689999999999999999999998 99999999999999999999999999998765
Q ss_pred ccccce-eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 711 RLDKHV-MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 711 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
...... ......+++.|+|||++ ....++.++|||||||++|||++ |+.||...... .... .+..+..
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~----~i~~~~~--- 268 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIK----AVDEGYR--- 268 (373)
T ss_dssp ---------------CTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHH----HHHTTEE---
T ss_pred cCCccceeccCCCcCCCccChhhh-ccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH----HHHcCCC---
Confidence 432211 11223456789999988 55678999999999999999998 99999654221 1111 1122111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
...+..++..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 269 -----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 269 -----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp -----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 1123455677999999999999999999999999998874
No 71
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.2e-41 Score=361.11 Aligned_cols=264 Identities=27% Similarity=0.358 Sum_probs=215.4
Q ss_pred hhhhhhcCeeccccceEEEEEEE-----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCee
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSF-----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLK 627 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 627 (843)
...|+..+.||+|+||.||+|.+ ..+++.||+|.+.........+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45577788999999999999998 2356899999987554434456789999999999999999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhcCC--------------------CCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCC
Q 003156 628 LLVSDYAPNGSLQAKLHERLP--------------------STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKP 687 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 687 (843)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999987532 123489999999999999999999998 999999999
Q ss_pred CCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCC
Q 003156 688 SNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGE 766 (843)
Q Consensus 688 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~ 766 (843)
+||+++.++.+||+|||+++...............+++.|+|||.+ .+..++.++|||||||++|||++ |+.||....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL-FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhh-cCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999877554443333455678889999988 45578999999999999999999 999997543
Q ss_pred CchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 767 DNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 767 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
... +... +..+. ....+.....++.+++.+||+.||++|||+.|++++|+++..
T Consensus 258 ~~~--~~~~----~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 258 PER--LFNL----LKTGH--------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GGG--HHHH----HHTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH--HHHH----hhcCC--------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 221 1111 11111 112344556778999999999999999999999999998754
No 72
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.5e-40 Score=379.52 Aligned_cols=391 Identities=20% Similarity=0.170 Sum_probs=316.1
Q ss_pred cCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCC
Q 003156 25 NCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHY 104 (843)
Q Consensus 25 ~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 104 (843)
.+...+++++++|+++.++...+ ++|++|+|++|.|++.+ +..|..+++|++|+|++|+|++..|+.|.++++
T Consensus 29 ~~~~~~~l~ls~~~L~~ip~~~~---~~L~~L~Ls~N~i~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 101 (562)
T 3a79_B 29 SNELESMVDYSNRNLTHVPKDLP---PRTKALSLSQNSISELR----MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQD 101 (562)
T ss_dssp ----CCEEECTTSCCCSCCTTSC---TTCCEEECCSSCCCCCC----GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTT
T ss_pred ccCCCcEEEcCCCCCccCCCCCC---CCcCEEECCCCCccccC----hhhhccCCCccEEECCCCCCCcCCHHHhCCCCC
Confidence 45566899999999999887654 79999999999998654 346889999999999999999888999999999
Q ss_pred CCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccC-CchhhcccCCcEEEeecCcccccCCCCccCCCCc--cEEE
Q 003156 105 LKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQL-PVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTL--EFLD 181 (843)
Q Consensus 105 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~ 181 (843)
|++|+|++|+|+ .+|.. .+++|++|+|++|++++.. |..|..+++|++|++++|++.+ ..+..+++| ++|+
T Consensus 102 L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~ 175 (562)
T 3a79_B 102 LEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCIL 175 (562)
T ss_dssp CCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEE
T ss_pred CCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEE
Confidence 999999999999 45554 8999999999999999743 6899999999999999999985 345666666 9999
Q ss_pred cccCCc--CCCCCCCCCCC--------------------------CCCcEEEecCCc-----------------------
Q 003156 182 FSNNHL--TGSLPSSLFNC--------------------------KKLSVIRLRGNS----------------------- 210 (843)
Q Consensus 182 L~~N~i--~~~~~~~~~~l--------------------------~~L~~L~L~~N~----------------------- 210 (843)
+++|.+ ++..|..+..+ ++|+.|++++|.
T Consensus 176 L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~ 255 (562)
T 3a79_B 176 LDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVT 255 (562)
T ss_dssp EEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEE
T ss_pred eecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEE
Confidence 999999 77777766653 356666666653
Q ss_pred -----CCC----CCCchhhccCcceeeccCCcceecCCCCCCCCCccccc--------------------------CccC
Q 003156 211 -----LNG----NIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLF--------------------------QTLR 255 (843)
Q Consensus 211 -----l~~----~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l--------------------------~~L~ 255 (843)
+.+ .++......+|+.|++++|.+.|.+|....... ...+ .+|+
T Consensus 256 L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~-~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~ 334 (562)
T 3a79_B 256 LQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYS-ETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIK 334 (562)
T ss_dssp EEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCC-SCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCS
T ss_pred ecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcc-cccchheehhhcccceeecChhhhhhhhccCcce
Confidence 110 011111222789999999999988887652110 0011 3478
Q ss_pred EEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCccccc--CCccccccCCCcEEEcCC
Q 003156 256 ILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGS--IPQEVCESRSLGILQLDG 333 (843)
Q Consensus 256 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~Ls~ 333 (843)
.|++++|.+.... ....+++|++|++++|.+++..|..+..+++|++|+|++|++++. +|..+..+++|+.|++++
T Consensus 335 ~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~ 412 (562)
T 3a79_B 335 MLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412 (562)
T ss_dssp EEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTT
T ss_pred EEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCC
Confidence 8888888875321 126789999999999999998999999999999999999999963 346789999999999999
Q ss_pred CCCCCCchh-hhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecC
Q 003156 334 NSLTGPIPQ-VIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRL 412 (843)
Q Consensus 334 N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 412 (843)
|.+++.+|. .+..+++|+.|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|+.|++++|++++..
T Consensus 413 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~ 489 (562)
T 3a79_B 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVP 489 (562)
T ss_dssp SCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCC
T ss_pred CcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCC
Confidence 999984554 588999999999999999988887665 79999999999999 78888889999999999999999544
Q ss_pred CC-CCCCCCCCCCCcCCCCCCCC
Q 003156 413 PV-GGVFPTLDQSSLQGNLGICS 434 (843)
Q Consensus 413 p~-~~~~~~~~~~~~~~n~~~c~ 434 (843)
+. ...++.+....+.+|++.|.
T Consensus 490 ~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 490 DGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp TTSTTTCTTCCCEECCSCCBCCC
T ss_pred HHHHhcCCCCCEEEecCCCcCCC
Confidence 43 45677888899999998875
No 73
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-40 Score=362.50 Aligned_cols=255 Identities=23% Similarity=0.312 Sum_probs=207.9
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-----ChHHHHHHHHHHHhccCCCccceeeEEEcCCe
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-----YPEDFEREVRVLGKARHPNLISLEGYYWTPQL 626 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 626 (843)
..+.|+..+.||+|+||.||+|....+|+.||+|.+....... ..+.+.+|+.++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3456778889999999999999999899999999997654322 34679999999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC----CcEEee
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY----NPRISD 702 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~D 702 (843)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 99999999999999999764 4689999999999999999999998 999999999999998776 799999
Q ss_pred ccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhh
Q 003156 703 FGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEE 782 (843)
Q Consensus 703 fgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 782 (843)
||+++....... .....||+.|+|||++ ....++.++||||+||++|||++|..||..... .. ..... ..
T Consensus 163 FG~a~~~~~~~~---~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-~~----~~~~i-~~ 232 (361)
T 2yab_A 163 FGLAHEIEDGVE---FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QE----TLANI-TA 232 (361)
T ss_dssp CSSCEECCTTCC---CCCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HH----HHHHH-HT
T ss_pred cCCceEcCCCCc---cccCCCCccEECchHH-cCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HH----HHHHH-Hh
Confidence 999987654322 2445799999999988 556789999999999999999999999965322 11 11111 11
Q ss_pred CCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 783 GNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 783 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+... +++ .........+.+++.+|+..||++|||+.|++++
T Consensus 233 ~~~~--~~~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 233 VSYD--FDE---EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp TCCC--CCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCC--CCc---hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1100 000 0112334568899999999999999999999864
No 74
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.3e-40 Score=358.96 Aligned_cols=250 Identities=24% Similarity=0.283 Sum_probs=207.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC--cccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD--IIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|+...+|+.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 34667789999999999999999899999999996542 2234567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 999999999999875 4689999999999999999999998 999999999999999999999999999986432
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.. .......||+.|+|||++ .+..++.++||||+||++|||++|+.||..... .. ....... +.
T Consensus 158 ~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~---~~~~i~~-~~------- 221 (337)
T 1o6l_A 158 DG--ATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ER---LFELILM-EE------- 221 (337)
T ss_dssp TT--CCBCCCEECGGGCCGGGG-SSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HHHHHHH-CC-------
T ss_pred CC--CcccccccChhhCChhhh-cCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HH---HHHHHHc-CC-------
Confidence 22 122456789999999998 556789999999999999999999999965321 11 1111111 11
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRP-----SMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RP-----s~~evl~~ 828 (843)
..++.....++.+++.+||+.||++|| +++|++++
T Consensus 222 --~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 --IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 113444566788999999999999999 99999876
No 75
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.3e-41 Score=363.41 Aligned_cols=260 Identities=25% Similarity=0.356 Sum_probs=207.6
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeE----EEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRM----LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
.+.|+..+.||+|+||.||+|.+..+++. ||+|.+.........+.+.+|+.++++++||||+++++++. .+..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 34567778999999999999999777664 78887755444444567789999999999999999999986 45678
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 999999999999999864 34689999999999999999999999 999999999999999999999999999998
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
+.............++..|+|||.+ ....++.++|||||||++|||+| |+.||....... ... .+..+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~----~~~~~~~~- 236 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESI-HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPD----LLEKGERL- 236 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHH----HHHTTCBC-
T ss_pred cCcccccccccCCCCcccccChHHh-ccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHH----HHHcCCCC-
Confidence 7654444444556778899999988 55678999999999999999999 999997543221 111 11222111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
..+..+..++.+++.+||+.||++|||+.|++++|+.+..
T Consensus 237 -------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 -------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1233344467889999999999999999999999988754
No 76
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7e-41 Score=377.37 Aligned_cols=262 Identities=24% Similarity=0.386 Sum_probs=213.2
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.+.++..+.||+|+||.||+|.+. ++..||||++.... ...+.|.+|+.++++++||||+++++++. .+..++||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 3455677789999999999999996 67889999986543 34688999999999999999999999986 56789999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.++++... ...+++..++.++.|+|.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 262 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp CCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred eecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 9999999999998641 23578899999999999999999998 999999999999999999999999999987653
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
... .......+++.|+|||++ ....++.++|||||||++|||+| |+.||...... .... .+..+...
T Consensus 337 ~~~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~----~i~~~~~~---- 404 (454)
T 1qcf_A 337 NEY-TAREGAKFPIKWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIR----ALERGYRM---- 404 (454)
T ss_dssp HHH-HTTCSSSSCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHH----HHHHTCCC----
T ss_pred Cce-eccCCCcccccccCHHHh-ccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHH----HHHcCCCC----
Confidence 221 112334567889999988 55678999999999999999999 99999754221 1111 12222111
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCC
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQ 838 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~ 838 (843)
..+..++.++.++|.+||+.||++|||++++++.|+.+......
T Consensus 405 ----~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~ 448 (454)
T 1qcf_A 405 ----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 448 (454)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCC
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccc
Confidence 12445667899999999999999999999999999998776544
No 77
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.8e-40 Score=354.07 Aligned_cols=258 Identities=21% Similarity=0.296 Sum_probs=209.8
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
...++..+.||+|+||.||+|+...+|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 44 ~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 122 (321)
T 2c30_A 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME 122 (321)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 344555668999999999999998889999999986543 3446778999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 123 ~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 194 (321)
T 2c30_A 123 FLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 194 (321)
T ss_dssp CCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred cCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccC
Confidence 99999999998753 589999999999999999999998 9999999999999999999999999999876542
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
.. ......||..|+|||++ .+..++.++|||||||++|||++|+.||..... .. ..... .... .+.
T Consensus 195 ~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~---~~~~~-~~~~-----~~~ 260 (321)
T 2c30_A 195 VP--KRKSLVGTPYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQ---AMKRL-RDSP-----PPK 260 (321)
T ss_dssp SC--CBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HH---HHHHH-HHSS-----CCC
T ss_pred cc--ccccccCCccccCHhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HH---HHHHH-hcCC-----CCC
Confidence 22 12456789999999988 556789999999999999999999999965321 11 11111 1111 111
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
. .........+.+++.+||+.||++|||+.|++++-.-...
T Consensus 261 ~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 261 L-KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp C-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred c-CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 1 1123445678899999999999999999999987544333
No 78
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=8e-41 Score=380.40 Aligned_cols=260 Identities=27% Similarity=0.356 Sum_probs=215.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
...|+..+.||+|+||.||+|.+..++..||||.+.... ...+.|.+|+.++++++||||++++++|...+..++|||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 344667779999999999999998779999999986543 346789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.++++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 297 ~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 297 FMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp CCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred ccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 999999999998752 35689999999999999999999998 9999999999999999999999999999876532
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
. ........++..|+|||++ ....++.++|||||||++|||+| |+.||...... ..... +..+..
T Consensus 372 ~-~~~~~~~~~~~~y~aPE~~-~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~----~~~~~~------ 437 (495)
T 1opk_A 372 T-YTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYEL----LEKDYR------ 437 (495)
T ss_dssp C-EECCTTCCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH----HHTTCC------
T ss_pred c-eeecCCCcCCcceeCHhHH-hcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHH----HHcCCC------
Confidence 2 2222344567889999988 55678999999999999999999 99999754322 11111 222211
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
...+..++..+.++|.+||+.||++|||+.|+++.|+.+...
T Consensus 438 --~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 438 --MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred --CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 123455667899999999999999999999999999987554
No 79
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.2e-40 Score=357.35 Aligned_cols=268 Identities=25% Similarity=0.348 Sum_probs=218.1
Q ss_pred hhhhhhhcCeeccccceEEEEEEE-----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCC
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSF-----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQ 625 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 625 (843)
+.+.|+..+.||+|+||.||+|.+ ..+++.||+|.+.........+.+.+|+.+++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 345677788999999999999986 3467899999997554434457789999999999 9999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCC--------------CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEE
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPS--------------TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNIL 691 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 691 (843)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 999999999999999999875321 23589999999999999999999998 9999999999999
Q ss_pred EcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchh
Q 003156 692 LDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVV 770 (843)
Q Consensus 692 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~ 770 (843)
++.++.+||+|||+++...............+|..|+|||.+ .+..++.++|||||||++|||+| |+.||........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 999999999999999877654444444556678899999987 45678999999999999999999 9999976543322
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 771 ILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 771 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
. .. ....+.. ...+...+..+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 257 ~-~~----~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 257 F-YK----MIKEGFR--------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp H-HH----HHHHTCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred H-HH----HhccCCC--------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1 11 1121111 0123345567899999999999999999999999999875543
No 80
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.3e-40 Score=353.25 Aligned_cols=266 Identities=22% Similarity=0.339 Sum_probs=210.6
Q ss_pred hhhhhhcCeeccccceEEEEEEE----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC--Ce
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSF----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP--QL 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~ 626 (843)
...|+..+.||+|+||.||+|++ ..+++.||+|++.........+.+.+|++++++++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 45577788999999999999994 5578999999997665555668899999999999999999999999876 56
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 79999999999999999765 34589999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccc-eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCC---------CchhhHHHHH
Q 003156 707 RLLTRLDKH-VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGE---------DNVVILSEHV 776 (843)
Q Consensus 707 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~---------~~~~~l~~~~ 776 (843)
+........ .......+|..|+|||.+ .+..++.++||||+|+++|||++|+.|+.... .........+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECL-MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeee-cCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 876543322 223455678889999987 55578899999999999999999999874321 0011111111
Q ss_pred HHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 777 RVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 777 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
......+.. ...+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 253 ~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 253 VNTLKEGKR--------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHTTCC--------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhccCC--------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 112222111 1234556678999999999999999999999999999864
No 81
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.3e-40 Score=351.31 Aligned_cols=264 Identities=23% Similarity=0.284 Sum_probs=207.2
Q ss_pred hhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-ChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEeC
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-YPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYA 634 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 634 (843)
|+..+.||+|+||+||+|.+..+++.||+|++....... ..+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 566779999999999999999899999999997554332 2467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccccc
Q 003156 635 PNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDK 714 (843)
Q Consensus 635 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 714 (843)
++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 84 DQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp SE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred CC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 75 666666553 35689999999999999999999999 999999999999999999999999999987643221
Q ss_pred ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC--c---ccc-
Q 003156 715 HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN--V---LDC- 788 (843)
Q Consensus 715 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~--~---~~~- 788 (843)
......||..|+|||++.....++.++||||+||++|||++|..||.........+....+....... . ...
T Consensus 157 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 --CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp --CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred --cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 22445788999999988555558999999999999999999999976654444333333222111000 0 000
Q ss_pred ---------cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 789 ---------VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 789 ---------~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...............+.+++.+|++.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0001111233456678899999999999999999999986
No 82
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.3e-40 Score=348.36 Aligned_cols=256 Identities=25% Similarity=0.481 Sum_probs=207.3
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccC------hHHHHHHHHHHHhccCCCccceeeEEEcCCe
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQY------PEDFEREVRVLGKARHPNLISLEGYYWTPQL 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 626 (843)
.+.|+..+.||+|+||.||+|.+..+++.||+|++........ .+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 4557777899999999999999988999999999865443222 267899999999999999999999987655
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCC--eeecCCCCCCEEEcCCCC-----cE
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPP--IIHYNLKPSNILLDDNYN-----PR 699 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~k 699 (843)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 6999999999999998764 35699999999999999999999998 7 999999999999987776 99
Q ss_pred EeeccCcccccccccceeccccccccccCCccccc-CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHH
Q 003156 700 ISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTC-QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRV 778 (843)
Q Consensus 700 l~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~ 778 (843)
|+|||+++..... .....||..|+|||.+. ....++.++||||+||++|||++|+.||..............
T Consensus 170 l~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-- 242 (287)
T 4f0f_A 170 VADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI-- 242 (287)
T ss_dssp ECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH--
T ss_pred eCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH--
Confidence 9999999754321 23457899999999873 234578899999999999999999999976543332221111
Q ss_pred HHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhc
Q 003156 779 LLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVI 832 (843)
Q Consensus 779 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~ 832 (843)
...+ . ....+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 243 -~~~~-~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 -REEG-L-------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -HHSC-C-------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -hccC-C-------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111 1 1123455567899999999999999999999999999864
No 83
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=356.48 Aligned_cols=254 Identities=24% Similarity=0.331 Sum_probs=208.2
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-----cChHHHHHHHHHHHhccCCCccceeeEEEcCCe
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-----QYPEDFEREVRVLGKARHPNLISLEGYYWTPQL 626 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 626 (843)
..+.|+..+.||+|+||.||+|....+|+.||+|.+...... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 456788888999999999999999889999999998654322 135779999999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC----CcEEee
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY----NPRISD 702 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~D 702 (843)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTS----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred EEEEEEcCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 99999999999999999764 4689999999999999999999998 999999999999999877 899999
Q ss_pred ccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhh
Q 003156 703 FGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEE 782 (843)
Q Consensus 703 fgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 782 (843)
||+++....... .....||+.|+|||++ ....++.++|||||||++|||++|+.||..... ... .......
T Consensus 162 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~----~~~~~~~ 232 (326)
T 2y0a_A 162 FGLAHKIDFGNE---FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QET----LANVSAV 232 (326)
T ss_dssp CTTCEECCTTSC---CCCCCSCTTTCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHH----HHHHHHT
T ss_pred CCCCeECCCCCc---cccccCCcCcCCceee-cCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-HHH----HHHHHhc
Confidence 999987653322 1345789999999988 556789999999999999999999999965322 111 1111111
Q ss_pred CCcccccCCCCC-CCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 783 GNVLDCVDPSMG-DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 783 ~~~~~~~d~~l~-~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
. .... .........+.+++.+||+.||++|||+.|++++
T Consensus 233 -~------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 233 -N------YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp -C------CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -C------CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 0000 0112334568899999999999999999999985
No 84
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.9e-40 Score=359.61 Aligned_cols=259 Identities=20% Similarity=0.264 Sum_probs=208.5
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC----cccChHHHHHHHHHHHhccCCCccceeeEEEcCCee
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD----IIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLK 627 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 627 (843)
..+.|+..+.||+|+||.||+|.+..+|+.||||.+.... .....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567888889999999999999998899999999985432 112457899999999999999999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC---cEEeecc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN---PRISDFG 704 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 704 (843)
++||||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999998876543445689999999999999999999998 9999999999999986554 9999999
Q ss_pred CcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC
Q 003156 705 LARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN 784 (843)
Q Consensus 705 l~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 784 (843)
+++....... ......||+.|+|||++ ....++.++||||+||++|||++|+.||.... . ........ +.
T Consensus 179 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~----~~~~~i~~-~~ 248 (351)
T 3c0i_A 179 VAIQLGESGL--VAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--E----RLFEGIIK-GK 248 (351)
T ss_dssp TCEECCTTSC--BCCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--H----HHHHHHHH-TC
T ss_pred ceeEecCCCe--eecCCcCCcCccCHHHH-cCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--H----HHHHHHHc-CC
Confidence 9987654222 22455789999999988 55578999999999999999999999997531 1 11111111 11
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 785 VLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 785 ~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. .++ .........+.+++.+||+.||++|||+.|++++
T Consensus 249 ~~--~~~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 249 YK--MNP---RQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp CC--CCH---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC--CCc---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 10 000 0012334578899999999999999999999875
No 85
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.9e-40 Score=353.69 Aligned_cols=261 Identities=26% Similarity=0.388 Sum_probs=203.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHh--ccCCCccceeeEEEcC----Ce
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGK--ARHPNLISLEGYYWTP----QL 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~----~~ 626 (843)
.+.|+..+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 45567778999999999999998 6899999998543 24566777777777 7899999999997543 45
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhh--------hcCCCCeeecCCCCCCEEEcCCCCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLH--------HSFRPPIIHYNLKPSNILLDDNYNP 698 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~ 698 (843)
.++||||+++|+|.++++. ..+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 81 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eEEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 7899999999999999964 35899999999999999999999 66 99999999999999999999
Q ss_pred EEeeccCcccccccccce--eccccccccccCCcccccCcC-----CCCCchhHHHHHHHHHHHHhC----------CCC
Q 003156 699 RISDFGLARLLTRLDKHV--MSNRFQSALGYVAPELTCQSL-----RVNEKCDIYGFGVLILELVTG----------RRP 761 (843)
Q Consensus 699 kl~Dfgl~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~-----~~~~~~Dv~S~Gvil~elltg----------~~p 761 (843)
||+|||+++......... ......||+.|+|||++.... .++.++|||||||++|||+|| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 999999998765433221 123457899999999884432 344799999999999999999 888
Q ss_pred CcCCCCchhhHHHHHHHHHhhCCcccccCCCCCC--CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhc
Q 003156 762 VEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGD--YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVI 832 (843)
Q Consensus 762 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~ 832 (843)
|................ .... ...+..+. ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 233 f~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 233 FYDVVPNDPSFEDMRKV-VCVD----QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTSCSSCCHHHHHHH-HTTS----CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCCCCcchhhhhHH-Hhcc----CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 86543332222222221 1111 11122211 2345677899999999999999999999999999876
No 86
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.1e-40 Score=355.65 Aligned_cols=268 Identities=22% Similarity=0.274 Sum_probs=197.7
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+..+|+.||+|++.........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 34677789999999999999998889999999997655445567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC--CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 634 APNGSLQAKLHERL--PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 634 ~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
++ |+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 98 69999987642 1234589999999999999999999998 999999999999999999999999999987643
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhC-Cc-----
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEG-NV----- 785 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~-~~----- 785 (843)
... ......+|..|+|||++.....++.++|||||||++|||++|+.||..... ...+........... ..
T Consensus 161 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 161 PVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-EEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp CCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCTTTCGGGG
T ss_pred Ccc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCChhHhhhhh
Confidence 221 123456889999999885556789999999999999999999999975432 222222221110000 00
Q ss_pred -ccccCCCCCC-------------CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 786 -LDCVDPSMGD-------------YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 786 -~~~~d~~l~~-------------~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.....+.... .......++.+++.+|++.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000111110 111344578899999999999999999999886
No 87
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.8e-40 Score=371.75 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=207.4
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCC-eeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ-LKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+. |+.||||.+.... ..+.|.+|+.++++++||||+++++++...+ ..++|||
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred HHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 44666779999999999999984 8899999986543 4578999999999999999999999988765 6899999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.++++... ...+++..++.++.|+|.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp CCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 999999999998762 33478999999999999999999999 9999999999999999999999999999854321
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
. ....++..|+|||.+ ....++.++|||||||++|||+| |+.||....... ... .+..+..
T Consensus 343 ~-----~~~~~~~~y~aPE~~-~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~----~i~~~~~------ 404 (450)
T 1k9a_A 343 Q-----DTGKLPVKWTAPEAL-REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP----RVEKGYK------ 404 (450)
T ss_dssp ---------CCCTTTSCHHHH-HSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHH----HHHTTCC------
T ss_pred c-----cCCCCCcceeCHHHh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH----HHHcCCC------
Confidence 1 223567889999988 55678999999999999999998 999997643322 111 1122211
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
...+..++..+.++|.+||+.||++|||+.|+++.|+.+...
T Consensus 405 --~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 405 --MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 123456677899999999999999999999999999988653
No 88
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.5e-40 Score=358.11 Aligned_cols=264 Identities=26% Similarity=0.384 Sum_probs=212.9
Q ss_pred hhhhhhcCeeccccceEEEEEEEC-------CCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcC
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFG-------TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTP 624 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 624 (843)
.+.|+..+.||+|+||.||+|.+. .+++.||+|++.........+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 456777889999999999999985 356789999986554434456789999999999 899999999999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhcCCC------------CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE
Q 003156 625 QLKLLVSDYAPNGSLQAKLHERLPS------------TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL 692 (843)
Q Consensus 625 ~~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 692 (843)
+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999875321 23489999999999999999999998 99999999999999
Q ss_pred cCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhh
Q 003156 693 DDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVI 771 (843)
Q Consensus 693 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~ 771 (843)
+.++.+||+|||+++...............+++.|+|||++ .+..++.++|||||||++|||++ |+.||..... ..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~ 267 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EE 267 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHh-cCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH--HH
Confidence 99999999999999876654433333445677889999987 45568999999999999999999 9999965422 11
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 772 LSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 772 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
+ ... +..+.. ...+..+..++.+++.+||+.||++|||+.|++++|+.+..
T Consensus 268 ~---~~~-~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 268 L---FKL-LKEGHR--------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp H---HHH-HHHTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H---HHH-HhcCCC--------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 111 122211 12244556678999999999999999999999999998754
No 89
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.1e-40 Score=351.71 Aligned_cols=259 Identities=22% Similarity=0.326 Sum_probs=198.8
Q ss_pred hhhhhhhcCeeccccceEEEEEEECC---CCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGT---QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
..+.|+..+.||+|+||.||+|.+.. .+..||+|.+.........+.+.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 34567778899999999999999854 356799999865443344567899999999999999999999984 45678
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 999999999999999875 34689999999999999999999998 999999999999999999999999999987
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
....... ......+++.|+|||.+ ....++.++|||||||++|||++ |..||....... .... +..+.
T Consensus 166 ~~~~~~~-~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~----i~~~~--- 234 (281)
T 1mp8_A 166 MEDSTYY-KASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGR----IENGE--- 234 (281)
T ss_dssp --------------CCGGGCCHHHH-HHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH----HHTTC---
T ss_pred cCccccc-ccccCCCcccccChhhc-ccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHH----HHcCC---
Confidence 6543221 22344567889999988 55678999999999999999997 999997543321 1111 11111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
....+...+..+.+++.+||+.||++|||+.|++++|+.+.
T Consensus 235 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 235 -----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11234455677899999999999999999999999998874
No 90
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.1e-40 Score=348.87 Aligned_cols=258 Identities=25% Similarity=0.297 Sum_probs=205.4
Q ss_pred ChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 551 DPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 551 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
...+.|+..+.||+|+||.||+|....+++.||+|++.........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 34567788889999999999999998899999999997765555668899999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE---cCCCCcEEeeccCcc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL---DDNYNPRISDFGLAR 707 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~ 707 (843)
|||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 999999999999976433346799999999999999999999998 99999999999999 456889999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
....... .....||..|+|||.+. ..++.++|||||||++|||++|+.||...... .. ...... ..
T Consensus 176 ~~~~~~~---~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~---~~~~~~-~~--- 241 (285)
T 3is5_A 176 LFKSDEH---STNAAGTALYMAPEVFK--RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EV---QQKATY-KE--- 241 (285)
T ss_dssp C-------------CTTGGGCCHHHHT--TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH---HHHHHH-CC---
T ss_pred ecCCccc---CcCcccccCcCChHHhc--cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HH---Hhhhcc-CC---
Confidence 6654222 24456899999999873 35889999999999999999999999754221 11 111111 11
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+...........++.+++.+||+.||++|||+.|++++
T Consensus 242 ---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 242 ---PNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---CCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---cccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111112234568899999999999999999999875
No 91
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=358.75 Aligned_cols=253 Identities=22% Similarity=0.330 Sum_probs=193.2
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
..+.|+..+.||+|+||.||+|.+..+++.||||.+.... ..+.+.+|++++++++||||+++++++.+++..++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 4456788889999999999999998889999999986543 3456889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC---CCCcEEeeccCccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---NYNPRISDFGLARL 708 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~ 708 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 128 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 128 ELVTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp CCCCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 999999999999764 4589999999999999999999998 9999999999999975 88999999999986
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
..... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.........+. .... ... ..
T Consensus 201 ~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----~i~~-~~~-~~ 270 (349)
T 2w4o_A 201 VEHQV---LMKTVCGTPGYCAPEIL-RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFR----RILN-CEY-YF 270 (349)
T ss_dssp ---------------CGGGSCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHH----HHHT-TCC-CC
T ss_pred cCccc---ccccccCCCCccCHHHh-cCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHH----HHHh-CCC-cc
Confidence 54322 12345789999999988 556789999999999999999999999975443322211 1111 111 01
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..........++.+++.+||+.||++|||+.|++++
T Consensus 271 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 ----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111233455678899999999999999999999986
No 92
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-40 Score=356.54 Aligned_cols=253 Identities=19% Similarity=0.284 Sum_probs=206.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 45677789999999999999999899999999986432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC--CCCcEEeeccCcccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD--NYNPRISDFGLARLLTR 711 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgl~~~~~~ 711 (843)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 9999999999764 34689999999999999999999998 9999999999999996 78999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.... ....||+.|+|||++ .+..++.++||||+||++|||++|..||..... . ............. +
T Consensus 157 ~~~~---~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~----~~~~~i~~~~~~~---~- 223 (321)
T 1tki_A 157 GDNF---RLLFTAPEYYAPEVH-QHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-Q----QIIENIMNAEYTF---D- 223 (321)
T ss_dssp TCEE---EEEESCGGGSCHHHH-TTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-H----HHHHHHHHTCCCC---C-
T ss_pred CCcc---ccccCChhhcCcHHh-cCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-H----HHHHHHHcCCCCC---C-
Confidence 3321 345689999999988 555689999999999999999999999965322 1 1112111111100 0
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
.......+.++.+++.+|+..||++|||+.|++++-
T Consensus 224 --~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 224 --EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp --HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred --hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 000123355788999999999999999999999974
No 93
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=359.66 Aligned_cols=252 Identities=24% Similarity=0.321 Sum_probs=207.7
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC--cccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD--IIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|....+++.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45677889999999999999999899999999986542 2234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 95 e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 999999999999864 4689999999999999999999999 999999999999999999999999999987653
Q ss_pred cccceeccccccccccCCcccccC--cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQ--SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
.. ......||+.|+|||++.. +..++.++|||||||++|||++|+.||....... .......... .
T Consensus 168 ~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~~-~------ 235 (384)
T 4fr4_A 168 ET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFET-T------ 235 (384)
T ss_dssp TC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHHH-C------
T ss_pred CC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhh-c------
Confidence 22 2245679999999998843 3458899999999999999999999997543221 1111111111 1
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPS-MAEVVQ 827 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs-~~evl~ 827 (843)
...++......+.+++.+||+.||++||+ ++++++
T Consensus 236 ---~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 ---VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11234455667899999999999999998 777765
No 94
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.1e-40 Score=373.06 Aligned_cols=262 Identities=26% Similarity=0.388 Sum_probs=207.2
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.+.|+..+.||+|+||.||+|.+. .+..||||.+.... ...+.|.+|++++++++||||+++++++.+ +..++||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 3455677789999999999999997 56789999986543 345789999999999999999999999876 6689999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.++++... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 258 e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999998631 24589999999999999999999998 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
... .......++..|+|||.+ ....++.++|||||||++|||+| |+.||...... +... .+..+..
T Consensus 333 ~~~-~~~~~~~~~~~y~aPE~~-~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~-~i~~~~~----- 399 (452)
T 1fmk_A 333 NEY-TARQGAKFPIKWTAPEAA-LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD-QVERGYR----- 399 (452)
T ss_dssp -----------CCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH-HHHTTCC-----
T ss_pred Cce-ecccCCcccccccCHhHH-hcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH-HHHcCCC-----
Confidence 222 122344567889999988 45678999999999999999999 99999654221 1111 1222211
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCC
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQ 838 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~ 838 (843)
...+..++..+.++|.+||+.||++|||++++++.|+.+.....+
T Consensus 400 ---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 400 ---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 123455667899999999999999999999999999998765543
No 95
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.9e-40 Score=357.39 Aligned_cols=267 Identities=21% Similarity=0.344 Sum_probs=216.0
Q ss_pred hhhhhhhcCeeccccceEEEEEEEC-----CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCe
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFG-----TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQL 626 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 626 (843)
..+.|+..+.||+|+||.||+|.+. .+++.||+|.+...........+.+|+.++++++||||+++++++.+.+.
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 3456778889999999999999875 24788999998755443445578999999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcC------CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEE
Q 003156 627 KLLVSDYAPNGSLQAKLHERL------PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRI 700 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 700 (843)
.++||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEE
Confidence 999999999999999998632 1224578999999999999999999999 9999999999999999999999
Q ss_pred eeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHH
Q 003156 701 SDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVL 779 (843)
Q Consensus 701 ~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~ 779 (843)
+|||+++...............+|+.|+|||.+ .+..++.++|||||||++|||++ |+.||..... . .....
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~---~~~~~- 252 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--E---QVLRF- 252 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--H---HHHHH-
T ss_pred CcCccccccccccccccccCCCCCCCccChhhh-ccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--H---HHHHH-
Confidence 999999876554433333445678899999987 55678999999999999999999 8899865322 1 11111
Q ss_pred HhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 780 LEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 780 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
+..+. ....+...+..+.+++.+||+.||++|||+.|++++|+.+..+.
T Consensus 253 ~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 253 VMEGG--------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp HHTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred HHcCC--------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 11111 12234455667899999999999999999999999999876543
No 96
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.5e-40 Score=348.58 Aligned_cols=263 Identities=12% Similarity=0.114 Sum_probs=211.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||.+.... ..+.+.+|+.+++.+ +|++++++++++.+....++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 44677789999999999999998899999999986543 234688899999999 79999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC-----cEEeeccCcc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN-----PRISDFGLAR 707 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgl~~ 707 (843)
|+ +|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 87 ~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 99999999875 34589999999999999999999998 9999999999999987776 9999999998
Q ss_pred cccccccc-----eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCc-hhhHHHHHHHHHh
Q 003156 708 LLTRLDKH-----VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDN-VVILSEHVRVLLE 781 (843)
Q Consensus 708 ~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~-~~~l~~~~~~~~~ 781 (843)
........ .......||..|+|||.+ .+..++.++|||||||++|||++|+.||...... .......+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTH-LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhh-cCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence 76543221 122456789999999988 5567899999999999999999999999764322 2111111111111
Q ss_pred hCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 782 EGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 782 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
..... ......+.++.+++.+||+.||++|||++++++.|+.+...
T Consensus 239 ~~~~~--------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 239 STPLR--------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HSCHH--------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CccHH--------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 11110 11223456789999999999999999999999999987654
No 97
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.7e-40 Score=352.63 Aligned_cols=263 Identities=25% Similarity=0.362 Sum_probs=202.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||+||+|.+. +|+.||+|++...... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred hhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 44677789999999999999996 6999999998654322 224678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FME-KDLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCS-EEHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCC-CCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 997 5888888764 34589999999999999999999998 9999999999999999999999999999876432
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCc-------
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNV------- 785 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~------- 785 (843)
... .....+|..|+|||++.....++.++||||+||++|||++|+.||....... .+...... ......
T Consensus 173 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~-~~~~~~~~~~~~~ 248 (311)
T 3niz_A 173 VRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSI-LGTPNPREWPQVQ 248 (311)
T ss_dssp CC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHH-HCCCCTTTSGGGT
T ss_pred ccc--ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH-HCCCChHHhhhhh
Confidence 221 2345678999999988555678999999999999999999999997543322 22222221 111000
Q ss_pred ---------ccccCCCC-CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 786 ---------LDCVDPSM-GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 786 ---------~~~~d~~l-~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
....+... .........++.+++.+|++.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000000 00112334578899999999999999999999985
No 98
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4e-40 Score=361.34 Aligned_cols=256 Identities=20% Similarity=0.278 Sum_probs=205.4
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
+.|+..+.||+|+||.||+|++..+++.||+|++...... ...+.+.+|..+++++ +||||+++++++.+.+..++|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 4567778999999999999999989999999999754322 2335688899999887 899999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 132 ~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999875 4589999999999999999999999 99999999999999999999999999998533
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCch---hhHHHHHHHHHhhCCccc
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV---VILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~---~~l~~~~~~~~~~~~~~~ 787 (843)
... .......||+.|+|||++ .+..++.++||||+||++|||++|+.||....... ......+...+....
T Consensus 205 ~~~--~~~~~~~gt~~Y~aPE~l-~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--- 278 (396)
T 4dc2_A 205 RPG--DTTSTFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--- 278 (396)
T ss_dssp CTT--CCBCCCCBCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC---
T ss_pred cCC--CccccccCCcccCCchhh-cCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc---
Confidence 221 223556899999999998 55678999999999999999999999996432111 011111111122111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSM------AEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~------~evl~~ 828 (843)
..++.....++.+++.+||+.||++||++ +|++++
T Consensus 279 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 279 ------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred ------cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 12344556678899999999999999995 677664
No 99
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=357.45 Aligned_cols=260 Identities=25% Similarity=0.360 Sum_probs=204.9
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeE----EEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRM----LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
.+.|+..+.||+|+||.||+|.+..+++. ||+|.+.........+.+.+|+.++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 35577788999999999999999777664 57777765555556788999999999999999999999998765 78
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 999999999999999875 35689999999999999999999998 999999999999999999999999999987
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
..............+|..|+|||.+ .+..++.++|||||||++|||++ |+.||....... +... +..+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~----~~~~~--- 236 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI----LEKGE--- 236 (327)
T ss_dssp -------------CCCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH----HHTTC---
T ss_pred ccCccccccccCCCccccccCHHHH-cCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHH----HHcCC---
Confidence 7544433333445667889999988 56678999999999999999999 999997543321 1111 11111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
....+.....++.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 237 -----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 -----RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -----CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -----CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 112344556678999999999999999999999999998764
No 100
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.7e-40 Score=357.91 Aligned_cols=265 Identities=25% Similarity=0.338 Sum_probs=195.3
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCe---EEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCee
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGR---MLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLK 627 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~---~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 627 (843)
+.+.|+..+.||+|+||.||+|.+..++. .||||.+..... ....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34567778899999999999999876554 899999865432 22356789999999999999999999999877655
Q ss_pred ------EEEEEeCCCCCHHHHHhhcC--CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcE
Q 003156 628 ------LLVSDYAPNGSLQAKLHERL--PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPR 699 (843)
Q Consensus 628 ------~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 699 (843)
++||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 89999999999999997642 1223689999999999999999999999 999999999999999999999
Q ss_pred EeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHH
Q 003156 700 ISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRV 778 (843)
Q Consensus 700 l~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~ 778 (843)
|+|||+++...............++..|+|||.+ .+..++.++|||||||++|||++ |+.||....... .. . .
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~-~---~ 251 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IY-N---Y 251 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HH-H---H
T ss_pred EeeccccccccccccccccccccCcccccCchhh-cCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-HH-H---H
Confidence 9999999876554433333445667889999988 55678999999999999999999 999997543321 11 1 1
Q ss_pred HHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 779 LLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 779 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
... +. ....+...+..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 252 ~~~-~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 252 LIG-GN--------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp HHT-TC--------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhc-CC--------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111 11 112344556678999999999999999999999999988744
No 101
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.5e-39 Score=379.73 Aligned_cols=399 Identities=24% Similarity=0.258 Sum_probs=317.9
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
|++|++|+|++|+|+ .+++.+|.++++|++|+|++|+|+++++..|.++++|++|+|++|+|++.++ ..|.++++
T Consensus 75 l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~----~~~~~L~~ 149 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLEN----FPIGHLKT 149 (635)
T ss_dssp CTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTT----CCCTTCTT
T ss_pred CCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCCh----hhhhcCcc
Confidence 578999999999999 7898999999999999999999999999999999999999999999986543 46889999
Q ss_pred CCEEecCCccCccc-CchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCC----cEEEccCCcccccCCchhhc------
Q 003156 81 LRTLDLSHNLFSGS-IPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHL----TTLDLSNNLFTGQLPVSLRL------ 149 (843)
Q Consensus 81 L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~N~l~~~~~~~~~~------ 149 (843)
|++|+|++|.++.. .|..+..+++|++|+|++|++++..+..|..+.++ ..++++.|.++...+..+..
T Consensus 150 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l 229 (635)
T 4g8a_A 150 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKL 229 (635)
T ss_dssp CCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEE
T ss_pred cCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhh
Confidence 99999999999754 57889999999999999999988777766544333 35666666655333222211
Q ss_pred ---------------------------------------------------------------------------ccCCc
Q 003156 150 ---------------------------------------------------------------------------LNSMI 154 (843)
Q Consensus 150 ---------------------------------------------------------------------------l~~L~ 154 (843)
+.+++
T Consensus 230 ~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 309 (635)
T 4g8a_A 230 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVS 309 (635)
T ss_dssp EEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCS
T ss_pred hhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccc
Confidence 11222
Q ss_pred EEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCC-------------------CCCCCCCCCcEEEecCCcCCC--
Q 003156 155 FISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLP-------------------SSLFNCKKLSVIRLRGNSLNG-- 213 (843)
Q Consensus 155 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~-------------------~~~~~l~~L~~L~L~~N~l~~-- 213 (843)
.+.+.+|.+.... .+.....|+.|++.+|.+....+ .....+++|+.|++++|.+..
T Consensus 310 ~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~ 387 (635)
T 4g8a_A 310 SFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKG 387 (635)
T ss_dssp EEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEE
T ss_pred ccccccccccccc--ccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccccc
Confidence 2222222222111 12333455555555555443222 233467899999999998863
Q ss_pred CCCchhhcc-CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCC-ccccCCCCCcEEEcCCCcccCC
Q 003156 214 NIPEGLFDL-GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIP-AEMGLFANLRYLNLSSNHLRSR 291 (843)
Q Consensus 214 ~~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ 291 (843)
..+...... +++.++++.|.+....+. ...+++|+.++++.|......+ ..+..+.+++.++++.|.+...
T Consensus 388 ~~~~~~~~~~~L~~L~~~~~~~~~~~~~-------~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~ 460 (635)
T 4g8a_A 388 CCSQSDFGTISLKYLDLSFNGVITMSSN-------FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 460 (635)
T ss_dssp ECCHHHHSCSCCCEEECCSCSEEEECSC-------CTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEEC
T ss_pred ccccchhhhhhhhhhhcccccccccccc-------ccccccccchhhhhccccccccccccccccccccccccccccccc
Confidence 234444443 799999999998754332 2347899999999998876544 5578899999999999999999
Q ss_pred CCCCccccccceEEEccCCccc-ccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccC
Q 003156 292 IPPELGYFHSLIHLDLRNNALY-GSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISN 370 (843)
Q Consensus 292 ~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 370 (843)
.+..+..+++|+.|+|++|.+. +..|..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.+
T Consensus 461 ~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~ 540 (635)
T 4g8a_A 461 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 540 (635)
T ss_dssp CTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTT
T ss_pred cccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhC
Confidence 9999999999999999999854 467889999999999999999999999999999999999999999999888999999
Q ss_pred CCCCCEEEccCCcccccCCcchhcc-cccceEeeccccceecCC
Q 003156 371 LNKLKILKLEFNELSGEIPQELGKL-ASLLAVNVSYNRLIGRLP 413 (843)
Q Consensus 371 l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~l~ls~N~l~~~~p 413 (843)
+++|++|+|++|+|++..|..+..+ ++|+.|+|++|++++...
T Consensus 541 l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 541 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999999999998 689999999999987654
No 102
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.3e-40 Score=348.51 Aligned_cols=257 Identities=21% Similarity=0.316 Sum_probs=207.3
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+.|+..+.||+|+||.||+|.+. ++..||+|++.... ...+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 345677789999999999999997 78889999986543 235789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 100 YMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred ccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 99999999999874 24589999999999999999999998 9999999999999999999999999999876542
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.. .......+|+.|+|||.+ ....++.++||||+|+++|||+| |+.||...... ..... +..+.
T Consensus 174 ~~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~-~~~~~------- 238 (283)
T 3gen_A 174 EY-TSSVGSKFPVRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEH-IAQGL------- 238 (283)
T ss_dssp HH-HSTTSTTSCGGGCCHHHH-HHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHH-HHTTC-------
T ss_pred cc-ccccCCccCcccCCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHH-Hhccc-------
Confidence 22 122344567889999988 45578999999999999999998 99999754321 11111 11111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
....+......+.+++.+||+.+|++|||++|++++|+.+.+
T Consensus 239 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 239 -RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 011233445678899999999999999999999999988743
No 103
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.9e-40 Score=346.56 Aligned_cols=256 Identities=22% Similarity=0.326 Sum_probs=210.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+..+++.||+|.+.........+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 45677789999999999999998889999999997655444557889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++......
T Consensus 87 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 87 CSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp CTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred cCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 9999999988753 4689999999999999999999998 99999999999999999999999999998765433
Q ss_pred cceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCC
Q 003156 714 KHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSM 793 (843)
Q Consensus 714 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 793 (843)
.........|+..|+|||.+.....++.++||||||+++|||++|+.||............+.. ....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~-------- 227 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----KKTY-------- 227 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT----TCTT--------
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh----cccc--------
Confidence 3222345678999999999854444578999999999999999999999765443332222211 1100
Q ss_pred CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 794 GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 794 ~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..........+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 01123445678899999999999999999999886
No 104
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8.3e-40 Score=353.40 Aligned_cols=260 Identities=12% Similarity=0.105 Sum_probs=208.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e 632 (843)
..|+..+.||+|+||.||+|....+|+.||||.+..... .+.+.+|+.+++++ +||||+++++++...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 446677799999999999999988999999999865432 34688999999999 99999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC-----cEEeeccCcc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN-----PRISDFGLAR 707 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgl~~ 707 (843)
|+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 99999999874 35699999999999999999999998 9999999999999998887 9999999998
Q ss_pred cccccccce-----eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCch-hhHHHHHHHHHh
Q 003156 708 LLTRLDKHV-----MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV-VILSEHVRVLLE 781 (843)
Q Consensus 708 ~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~-~~l~~~~~~~~~ 781 (843)
.+....... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||....... ......+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~ 237 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTH-LGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR 237 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHH-cCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc
Confidence 765432211 12456789999999988 55678999999999999999999999997643221 111111111111
Q ss_pred hCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 782 EGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 782 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
.... +. .....+ ++.+++..||+.||++||++.++++.|+.+.
T Consensus 238 ~~~~-~~-------~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 238 ATPI-EV-------LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HSCH-HH-------HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred cCCH-HH-------HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 0000 00 011233 7899999999999999999999999998764
No 105
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=355.62 Aligned_cols=271 Identities=21% Similarity=0.295 Sum_probs=211.3
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEc----CCeeE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWT----PQLKL 628 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~ 628 (843)
.+.|+..+.||+|+||.||+|....+++.||||++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 455777889999999999999998899999999986543 2335678999999999999999999999973 34678
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+||||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999987544456799999999999999999999999 999999999999999999999999999876
Q ss_pred ccccccce-------eccccccccccCCcccccCcC--CCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHH
Q 003156 709 LTRLDKHV-------MSNRFQSALGYVAPELTCQSL--RVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVL 779 (843)
Q Consensus 709 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~--~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~ 779 (843)
........ ......||..|+|||.+.... .++.++|||||||++|||++|+.||..............
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--- 260 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV--- 260 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH---
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh---
Confidence 53211100 012335689999999874322 368999999999999999999999964211111111111
Q ss_pred HhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 003156 780 LEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQR 839 (843)
Q Consensus 780 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~~ 839 (843)
.... . ..........+.+++.+||+.||++|||+.|++++|+.+.++.|..
T Consensus 261 -~~~~-------~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 261 -QNQL-------S-IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp -HCC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred -hccC-------C-CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 1100 0 0112344567899999999999999999999999999998887653
No 106
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3e-40 Score=349.86 Aligned_cols=263 Identities=27% Similarity=0.434 Sum_probs=198.8
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
.+.|+..+.||+|+||.||+|++. ..||+|.+..... ....+.|.+|+.++++++||||+++++++ .....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 455777889999999999999874 3599999865432 22346789999999999999999999965 455678999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 99 QWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999999764 35689999999999999999999998 999999999999999999999999999986654
Q ss_pred cccceeccccccccccCCccccc--CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 712 LDKHVMSNRFQSALGYVAPELTC--QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
...........||..|+|||.+. ....++.++||||||+++|||++|+.||........ +. .....+..
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~----~~~~~~~~---- 243 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-II----EMVGRGSL---- 243 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HH----HHHHHTSC----
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HH----HHhccccc----
Confidence 33322334567899999999874 245678899999999999999999999976543221 11 12222221
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
.+........++..+.+++.+||+.+|++|||+.|+++.|+.+..
T Consensus 244 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 222333445666789999999999999999999999999998764
No 107
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.7e-40 Score=354.11 Aligned_cols=266 Identities=25% Similarity=0.339 Sum_probs=214.5
Q ss_pred hhhhhhcCeeccccceEEEEEEE-----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCC-
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSF-----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQ- 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~- 625 (843)
.+.|+..+.||+|+||.||+|.+ ..+++.||||.+.........+.+.+|+.+++++ +||||+++++++..++
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 45677788999999999999985 3467899999997654433456789999999999 7999999999998765
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCC------------CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPS------------TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD 693 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 693 (843)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence 489999999999999999875321 22388999999999999999999998 999999999999999
Q ss_pred CCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhH
Q 003156 694 DNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVIL 772 (843)
Q Consensus 694 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l 772 (843)
.++.+||+|||+++...............+|+.|+|||++ .+..++.++|||||||++|||+| |+.||..........
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~ 261 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhh-ccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHH
Confidence 9999999999999876554444444556778899999988 55678999999999999999998 999997654332221
Q ss_pred HHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 773 SEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 773 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
. .+..+.. ...+.....++.+++.+||+.||++|||+.|++++|+.+.++
T Consensus 262 -~----~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 262 -R----RLKEGTR--------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp -H----HHHHTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -H----HhccCcc--------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 1 1122211 112334456789999999999999999999999999987654
No 108
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=348.85 Aligned_cols=252 Identities=22% Similarity=0.285 Sum_probs=196.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-------------------------cChHHHHHHHHHHHh
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-------------------------QYPEDFEREVRVLGK 608 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~~ 608 (843)
+.|+..+.||+|+||.||+|....+++.||||.+...... ...+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 3466777999999999999999889999999998654321 113568899999999
Q ss_pred ccCCCccceeeEEEc--CCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCC
Q 003156 609 ARHPNLISLEGYYWT--PQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLK 686 (843)
Q Consensus 609 l~h~niv~l~g~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 686 (843)
++||||+++++++.+ .+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+|||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 999999999999987 567899999999999877543 24689999999999999999999999 99999999
Q ss_pred CCCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCC--CCCchhHHHHHHHHHHHHhCCCCCcC
Q 003156 687 PSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLR--VNEKCDIYGFGVLILELVTGRRPVEY 764 (843)
Q Consensus 687 ~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~--~~~~~Dv~S~Gvil~elltg~~p~~~ 764 (843)
|+||+++.++.+||+|||+++....... ......||+.|+|||.+..... ++.++|||||||++|||++|+.||..
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred HHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999987654322 1244578999999998844332 47889999999999999999999965
Q ss_pred CCCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 765 GEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 765 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
... ..+ .. .+....... + .......++.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~--~~~---~~-~~~~~~~~~---~----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 243 ERI--MCL---HS-KIKSQALEF---P----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SSH--HHH---HH-HHHHCCCCC---C----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ccH--HHH---HH-HHhcccCCC---C----CccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 321 111 11 111111110 1 122345578899999999999999999999875
No 109
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=364.78 Aligned_cols=255 Identities=23% Similarity=0.311 Sum_probs=206.2
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
.+.|+..+.||+|+||.||+|....+|+.||+|.+...... ...+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45677888999999999999999989999999998655432 23456889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc---CCCCcEEeeccCccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD---DNYNPRISDFGLARL 708 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgl~~~ 708 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++.
T Consensus 90 E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 90 DLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp CCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 999999999999875 4589999999999999999999999 999999999999998 568899999999987
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
...... ......||+.|+|||++ ....++.++||||+||++|+|++|+.||..... . .+ ... +..+.. ..
T Consensus 163 ~~~~~~--~~~~~~gt~~Y~APE~l-~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-~-~~---~~~-i~~~~~-~~ 232 (444)
T 3soa_A 163 VEGEQQ--AWFGFAGTPGYLSPEVL-RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-H-RL---YQQ-IKAGAY-DF 232 (444)
T ss_dssp CCTTCC--BCCCSCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-H-HH---HHH-HHHTCC-CC
T ss_pred ecCCCc--eeecccCCcccCCHHHh-cCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-H-HH---HHH-HHhCCC-CC
Confidence 654322 12346789999999988 556789999999999999999999999965322 1 11 111 122211 11
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+ .......++.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSP----EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTT----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred Ccc----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111 122345678899999999999999999999985
No 110
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.5e-40 Score=358.43 Aligned_cols=256 Identities=21% Similarity=0.263 Sum_probs=196.8
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+.|+..+.||+|+||.||+|+...+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 355777889999999999999999899999999996543 234678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC--cEEeeccCccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN--PRISDFGLARLLT 710 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgl~~~~~ 710 (843)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++...
T Consensus 97 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 97 YASGGELYERICNA----GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred eCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 99999999999875 3589999999999999999999998 9999999999999987665 9999999997543
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
... ......||+.|+|||++......+.++||||+||++|||++|+.||....... .....++.......
T Consensus 170 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~~------ 239 (361)
T 3uc3_A 170 LHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVKY------ 239 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTTCC------
T ss_pred ccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcCCC------
Confidence 221 12445789999999988544333455999999999999999999997643322 22222222222111
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
..+ ........+.+++.+||+.||++|||+.|++++-
T Consensus 240 -~~~-~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 240 -SIP-DDIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp -CCC-TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred -CCC-CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 000 1112345688999999999999999999999873
No 111
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2e-40 Score=358.97 Aligned_cols=265 Identities=22% Similarity=0.331 Sum_probs=214.1
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCC-----eEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCe
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQG-----RMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQL 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 626 (843)
.+.|+..+.||+|+||.||+|.+..++ ..||+|.+.........+.+.+|+.+++++ +||||+++++++...+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 345677789999999999999986554 379999986554334456789999999999 89999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcCC----------CCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC
Q 003156 627 KLLVSDYAPNGSLQAKLHERLP----------STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY 696 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 696 (843)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 9999999999999999986421 134589999999999999999999998 999999999999999999
Q ss_pred CcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHH
Q 003156 697 NPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEH 775 (843)
Q Consensus 697 ~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~ 775 (843)
.+||+|||+++...............+|..|+|||.+ .+..++.++|||||||++|||+| |..||........ ...
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~- 278 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYK- 278 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HHH-
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHh-ccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HHH-
Confidence 9999999999876554443344556678899999987 45678999999999999999999 9999976433321 111
Q ss_pred HHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 776 VRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 776 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
....+.. ...+...+..+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 279 ---~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 279 ---LVKDGYQ--------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp ---HHHHTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHhcCCC--------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 1222111 11233445678899999999999999999999999988643
No 112
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=8.1e-40 Score=357.02 Aligned_cols=255 Identities=24% Similarity=0.318 Sum_probs=207.0
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
..+.|+..+.||+|+||.||+|.+..+|+.||+|.+...... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 345678888999999999999999889999999999755432 2235688999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC---CCcEEeeccCcc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN---YNPRISDFGLAR 707 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgl~~ 707 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++
T Consensus 107 ~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 9999999999999764 4689999999999999999999999 99999999999999864 459999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
....... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||..... ..+ ... +..+...
T Consensus 180 ~~~~~~~---~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~---~~~-i~~~~~~- 248 (362)
T 2bdw_A 180 EVNDSEA---WHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRL---YAQ-IKAGAYD- 248 (362)
T ss_dssp CCTTCCS---CCCSCSCTTTCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH---HHH-HHHTCCC-
T ss_pred EecCCcc---cccCCCCccccCHHHH-ccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHH---HHH-HHhCCCC-
Confidence 7653222 2346789999999988 555789999999999999999999999965322 111 111 1111110
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. .........++.+++.+||+.||++|||+.|++++
T Consensus 249 ~~----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 YP----SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CC----TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CC----cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 01123345678899999999999999999999876
No 113
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=349.34 Aligned_cols=257 Identities=28% Similarity=0.444 Sum_probs=199.7
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+ .++.||+|++... ...+.|.+|+.++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 4466777999999999999998 4789999998533 235679999999999999999999998864 47899999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC-cEEeeccCccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN-PRISDFGLARLLTRL 712 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfgl~~~~~~~ 712 (843)
+++|+|.+++.... ....+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||+++.....
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 99999999998652 2235788999999999999999999942238999999999999998887 799999999765432
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
. ....||..|+|||++ .+..++.++|||||||++|||++|+.||............ . ...+.
T Consensus 160 ~-----~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~-~~~~~-------- 221 (307)
T 2eva_A 160 M-----TNNKGSAAWMAPEVF-EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW---A-VHNGT-------- 221 (307)
T ss_dssp ----------CCTTSSCHHHH-TCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH---H-HHTTC--------
T ss_pred c-----ccCCCCCceEChhhh-CCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH---H-HhcCC--------
Confidence 1 234689999999988 5567899999999999999999999999754332211111 1 11111
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
....+...+..+.+++.+||+.||++|||++|++++|+.+....
T Consensus 222 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 222 RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 11223445567889999999999999999999999999886644
No 114
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.3e-40 Score=344.55 Aligned_cols=253 Identities=30% Similarity=0.406 Sum_probs=193.8
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc---ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI---IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
.|+..+.||+|+||.||+|.+ .++.||||.+..... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 8 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 8 ELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp SEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred heeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 456677999999999999998 488999999865432 233567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC--------CCCcEEeec
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD--------NYNPRISDF 703 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Df 703 (843)
||+++|+|.+++.. ..+++..++.++.|++.||+|||+....+|+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999999864 35899999999999999999999982222999999999999986 778999999
Q ss_pred cCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhC
Q 003156 704 GLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEG 783 (843)
Q Consensus 704 gl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 783 (843)
|+++....... ....||..|+|||.+ .+..++.++||||||+++|||++|+.||........ .... ...
T Consensus 161 g~~~~~~~~~~----~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~-~~~ 229 (271)
T 3dtc_A 161 GLAREWHRTTK----MSAAGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-----AYGV-AMN 229 (271)
T ss_dssp CC-----------------CCGGGSCHHHH-HHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-----HHHH-HTS
T ss_pred Ccccccccccc----cCCCCccceeCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHhh-hcC
Confidence 99986553222 345688999999988 556789999999999999999999999975432111 1111 111
Q ss_pred CcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhc
Q 003156 784 NVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVI 832 (843)
Q Consensus 784 ~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~ 832 (843)
.. ....+...+..+.+++.+||+.||++|||+.|++++|+.+
T Consensus 230 ~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 KL-------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CC-------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11 1123455567799999999999999999999999999864
No 115
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=358.49 Aligned_cols=249 Identities=24% Similarity=0.298 Sum_probs=201.5
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC--cccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEEE
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD--IIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~ 631 (843)
.|+..+.||+|+||.||+|++..+|+.||||++.... .....+.+.+|..+++.+ +||||+++++++.+.+..++||
T Consensus 24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~ 103 (353)
T 3txo_A 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM 103 (353)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence 4667779999999999999999899999999996542 123456788999999988 6999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 104 E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 104 EFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999875 4589999999999999999999999 999999999999999999999999999985432
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.. .......||+.|+|||++ .+..++.++||||+||++|||++|+.||..... .. ....... +.
T Consensus 177 ~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~----~~~~i~~-~~------- 240 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAPEIL-QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DD----LFEAILN-DE------- 240 (353)
T ss_dssp -----------CCGGGCCHHHH-HHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-HH----HHHHHHH-CC-------
T ss_pred CC--ccccccCCCcCeEChhhc-CCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-HH----HHHHHHc-CC-------
Confidence 21 222456799999999988 555789999999999999999999999975422 11 1111111 11
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSM------AEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~------~evl~~ 828 (843)
..++......+.+++.+|++.||++||++ .|++++
T Consensus 241 --~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 241 --VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 11344455678899999999999999998 777764
No 116
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=362.32 Aligned_cols=260 Identities=26% Similarity=0.349 Sum_probs=197.1
Q ss_pred hhhcCeeccccceEEEEEEECCC---CeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC-CeeEEEE
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQ---GRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP-QLKLLVS 631 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~~lV~ 631 (843)
|+..+.||+|+||.||+|.+..+ +..||+|.+.........+.|.+|+.++++++||||+++++++... +..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 45567899999999999998432 2468999986544444457899999999999999999999998654 5778999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 171 e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp ECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred ECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 999999999999864 35688999999999999999999998 999999999999999999999999999987643
Q ss_pred cccce--eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 712 LDKHV--MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 712 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
..... ......+|..|+|||.+ ....++.++|||||||++|||+| |..||....... .... +..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~----~~~~~~--- 314 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVY----LLQGRR--- 314 (373)
T ss_dssp -------------CCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHH----HHTTCC---
T ss_pred cccccccccCCCCCcccccChHHh-cCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHH----HHcCCC---
Confidence 32211 12334567889999988 56678999999999999999999 666775443221 1111 111111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
...+..++..+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 315 -----~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 315 -----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1124455667899999999999999999999999999986554
No 117
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-40 Score=348.70 Aligned_cols=261 Identities=25% Similarity=0.349 Sum_probs=207.9
Q ss_pred hhhcCeeccccceEEEEEEECCCC---eEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCee-EEEE
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQG---RMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLK-LLVS 631 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-~lV~ 631 (843)
++..+.||+|+||.||+|.+..++ ..||+|.+.........+.+.+|+.++++++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 344568999999999999975443 379999986544434456789999999999999999999999876655 8999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 103 e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 103 PYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp CCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred ecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 999999999999874 35689999999999999999999999 999999999999999999999999999986644
Q ss_pred ccc--ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 712 LDK--HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 712 ~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
... ........++..|+|||.+ .+..++.++||||||+++|||++|..|+........ ....+ ..+.
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~----~~~~----- 245 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESL-QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFL----AQGR----- 245 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHH-TTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHH----HTTC-----
T ss_pred CcccccccCcCCCCCccccChhhh-ccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHh----hcCC-----
Confidence 321 1222345678899999988 566789999999999999999997666544333222 22111 1111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
....+...+..+.+++.+||+.||++|||++|+++.|+.+....
T Consensus 246 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 246 ---RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 11123445567899999999999999999999999999886654
No 118
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=348.29 Aligned_cols=247 Identities=25% Similarity=0.337 Sum_probs=206.4
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|+...+|+.||+|.+..... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 346677899999999999999988999999999965421 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 999999999999874 4589999999999999999999998 999999999999999999999999999986543
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
. .....||+.|+|||++ .+..++.++||||+||++|||++|+.||..... . ......... .
T Consensus 159 ~-----~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~----~~~~~i~~~-~------- 219 (318)
T 1fot_A 159 V-----TYTLCGTPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-M----KTYEKILNA-E------- 219 (318)
T ss_dssp C-----BCCCCSCTTTCCHHHH-TTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-H----HHHHHHHHC-C-------
T ss_pred c-----cccccCCccccCHhHh-cCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-H----HHHHHHHhC-C-------
Confidence 2 2345789999999988 556789999999999999999999999965322 1 111122211 1
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRP-----SMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RP-----s~~evl~~ 828 (843)
..++.....++.+++.+|+..||++|| +++|++++
T Consensus 220 --~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 --LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 112344556788999999999999999 89999865
No 119
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8e-40 Score=354.38 Aligned_cols=256 Identities=20% Similarity=0.278 Sum_probs=205.2
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
+.|+..+.||+|+||.||+|++..+++.||+|++...... ...+.+.+|..+++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 4466778999999999999999989999999999765322 2235678899999988 899999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 9999999999999875 3589999999999999999999998 99999999999999999999999999998643
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchh---hHHHHHHHHHhhCCccc
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVV---ILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~---~l~~~~~~~~~~~~~~~ 787 (843)
... .......||+.|+|||++ .+..++.++||||+||++|||++|+.||........ .....+...+....
T Consensus 162 ~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~--- 235 (345)
T 3a8x_A 162 RPG--DTTSTFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--- 235 (345)
T ss_dssp CTT--CCBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC---
T ss_pred CCC--CcccccCCCccccCcccc-CCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC---
Confidence 222 122456799999999988 556789999999999999999999999965311110 00111111111111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSM------AEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~------~evl~~ 828 (843)
..++.....++.+++.+||+.||++||++ .|++++
T Consensus 236 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 236 ------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ------CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 11344556678899999999999999995 677764
No 120
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.2e-40 Score=355.33 Aligned_cols=269 Identities=23% Similarity=0.325 Sum_probs=209.6
Q ss_pred cccChhhhhhhcCeeccccceEEEEEEE-----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEE
Q 003156 548 CSIDPETLLEKAAEVGEGVFGTVYKVSF-----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYW 622 (843)
Q Consensus 548 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~ 622 (843)
+.....+.|+..+.||+|+||.||+|.+ ..+++.||||.+...........+.+|+.++++++||||+++++++.
T Consensus 24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 103 (327)
T 2yfx_A 24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103 (327)
T ss_dssp SCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc
Confidence 3334566788888999999999999994 44678999999865444444567899999999999999999999999
Q ss_pred cCCeeEEEEEeCCCCCHHHHHhhcCCC---CCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC---CC
Q 003156 623 TPQLKLLVSDYAPNGSLQAKLHERLPS---TPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---NY 696 (843)
Q Consensus 623 ~~~~~~lV~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~ 696 (843)
.....++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. +.
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 999999999999999999999875321 24589999999999999999999998 9999999999999994 45
Q ss_pred CcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHH
Q 003156 697 NPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEH 775 (843)
Q Consensus 697 ~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~ 775 (843)
.+||+|||+++...............+++.|+|||.+ ....++.++||||||+++|||+| |+.||..... .. .
T Consensus 181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~---~ 254 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QE---V 254 (327)
T ss_dssp CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HH---H
T ss_pred eEEECccccccccccccccccCCCcCCCcceeCHhHh-cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HH---H
Confidence 6999999999866543333333455678899999987 45578999999999999999998 9999865322 11 1
Q ss_pred HHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 776 VRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 776 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
.. .+..+.. ...+......+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 255 ~~-~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 255 LE-FVTSGGR--------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp HH-HHHTTCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH-HHhcCCC--------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 11 1121111 12234455678999999999999999999999999987643
No 121
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.2e-40 Score=350.77 Aligned_cols=269 Identities=20% Similarity=0.323 Sum_probs=204.9
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
....|+..+.||+|+||.||+|....+|+.||+|++..... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 34567788899999999999999988999999999865332 2234578899999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999986433456789999999999999999999998 9999999999999999999999999999866
Q ss_pred cccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
..... ......|+..|+|||.+ ....++.++||||||+++|||++|+.||.........+... +.......
T Consensus 187 ~~~~~--~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~-- 257 (310)
T 2wqm_A 187 SSKTT--AAHSLVGTPYYMSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK----IEQCDYPP-- 257 (310)
T ss_dssp --------------CCSSCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHH----HHTTCSCC--
T ss_pred cCCCc--cccccCCCeeEeChHHh-CCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHH----hhcccCCC--
Confidence 43221 12345688999999988 55678999999999999999999999997543332222221 12111110
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCC
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 837 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~ 837 (843)
. .......++.+++.+||+.||++|||+.|+++.|+.+++...
T Consensus 258 ---~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 258 ---L--PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp ---C--CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ---C--cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 0 123445678899999999999999999999999999866543
No 122
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.7e-40 Score=350.37 Aligned_cols=256 Identities=22% Similarity=0.309 Sum_probs=205.1
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCC-------eEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCC
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQG-------RMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 625 (843)
.+.|+..+.||+|+||.||+|.+..++ ..||+|.+.... ....+.+.+|+.++++++||||+++++++.+++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 455777789999999999999987655 579999985433 334578999999999999999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC--------
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN-------- 697 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-------- 697 (843)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999875 23489999999999999999999999 9999999999999998887
Q ss_pred cEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHH
Q 003156 698 PRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVR 777 (843)
Q Consensus 698 ~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~ 777 (843)
+||+|||+++..... ....++..|+|||.+.....++.++|||||||++|||++|..|+.......... .
T Consensus 160 ~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~----~ 229 (289)
T 4fvq_A 160 IKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL----Q 229 (289)
T ss_dssp EEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH----H
T ss_pred eeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH----H
Confidence 999999999755331 234578889999988554678999999999999999999665554332221111 1
Q ss_pred HHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 778 VLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 778 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
...... ..+.....++.+++.+||+.||++|||+.|++++|+.+..+.
T Consensus 230 -~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 230 -FYEDRH----------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp -HHHTTC----------CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred -HhhccC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 111111 112222345788999999999999999999999999997764
No 123
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.6e-40 Score=357.89 Aligned_cols=254 Identities=18% Similarity=0.268 Sum_probs=200.1
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCC--------
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ-------- 625 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-------- 625 (843)
+.|+..+.||+|+||.||+|++..+|+.||||++.........+.+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 456777899999999999999988999999999976554445678999999999999999999999986543
Q ss_pred -------------------------------------------------eeEEEEEeCCCCCHHHHHhhcCCCCCCCChh
Q 003156 626 -------------------------------------------------LKLLVSDYAPNGSLQAKLHERLPSTPPLSWT 656 (843)
Q Consensus 626 -------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~ 656 (843)
..++||||+++|+|.+++.... .....++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~ 164 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHG 164 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhH
Confidence 2789999999999999998753 23445777
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccccc----------eeccccccccc
Q 003156 657 NRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKH----------VMSNRFQSALG 726 (843)
Q Consensus 657 ~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~----------~~~~~~~g~~~ 726 (843)
.++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 7899999999999999998 9999999999999999999999999999876543211 12234568999
Q ss_pred cCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHH
Q 003156 727 YVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLK 806 (843)
Q Consensus 727 y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~ 806 (843)
|+|||++ .+..++.++|||||||++|||++|..|+... ...... .... ..+........++.+
T Consensus 242 y~aPE~~-~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~-~~~~--------~~~~~~~~~~~~~~~ 304 (332)
T 3qd2_B 242 YMSPEQI-HGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITD-VRNL--------KFPLLFTQKYPQEHM 304 (332)
T ss_dssp GSCHHHH-HCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHH-HHTT--------CCCHHHHHHCHHHHH
T ss_pred ccChHHh-cCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHH-hhcc--------CCCcccccCChhHHH
Confidence 9999988 4557899999999999999999987765211 011111 1111 111112334456789
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 003156 807 LALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 807 l~~~c~~~~P~~RPs~~evl~~ 828 (843)
++.+||+.||++|||++|++++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCCCCcCCCHHHHhhc
Confidence 9999999999999999999875
No 124
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.9e-40 Score=346.41 Aligned_cols=261 Identities=24% Similarity=0.312 Sum_probs=201.6
Q ss_pred hhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEeC
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYA 634 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 634 (843)
|+..+.||+|+||.||+|.. .+|+.||+|++..... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred chhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEec
Confidence 55677899999999999999 4799999999865432 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccccc
Q 003156 635 PNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDK 714 (843)
Q Consensus 635 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 714 (843)
++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (288)
T 1ob3_A 83 DQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (288)
T ss_dssp SE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred CC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence 75 999998764 34689999999999999999999998 999999999999999999999999999986543211
Q ss_pred ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC--------cc
Q 003156 715 HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN--------VL 786 (843)
Q Consensus 715 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~--------~~ 786 (843)
......+|..|+|||++.....++.++||||+||++|||++|+.||..... ...+....+. ..... ..
T Consensus 156 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 231 (288)
T 1ob3_A 156 --KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-ADQLMRIFRI-LGTPNSKNWPNVTEL 231 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHH-HCCCCTTTSTTGGGS
T ss_pred --ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHH-HCCCChhhchhhhcc
Confidence 113446789999999885556789999999999999999999999975422 2222222211 11000 00
Q ss_pred cccCCCCC--------CCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 787 DCVDPSMG--------DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 787 ~~~d~~l~--------~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...++... ........++.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 01111111 1123355678899999999999999999999875
No 125
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=381.10 Aligned_cols=251 Identities=23% Similarity=0.339 Sum_probs=203.0
Q ss_pred eeccccceEEEEEEEC--CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEeCCCCC
Q 003156 561 EVGEGVFGTVYKVSFG--TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGS 638 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gs 638 (843)
.||+|+||.||+|.+. .++..||||++.........+.|.+|++++++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999885 34667999999765545567889999999999999999999999976 56899999999999
Q ss_pred HHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccccce-e
Q 003156 639 LQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHV-M 717 (843)
Q Consensus 639 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~-~ 717 (843)
|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+....... .
T Consensus 422 L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99999764 35689999999999999999999998 99999999999999999999999999998765433221 1
Q ss_pred ccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCCC
Q 003156 718 SNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDY 796 (843)
Q Consensus 718 ~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 796 (843)
.....+++.|+|||++ ....++.++|||||||++|||+| |+.||....... .. ..+..+.. ...
T Consensus 496 ~~~~~~~~~y~APE~~-~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~----~~i~~~~~--------~~~ 560 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VM----AFIEQGKR--------MEC 560 (613)
T ss_dssp ------CCTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HH----HHHHTTCC--------CCC
T ss_pred ccCCCCccceeCHhhh-cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HH----HHHHcCCC--------CCC
Confidence 1233456889999988 55679999999999999999998 999997653321 11 12222221 123
Q ss_pred ChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 797 PEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 797 ~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
+..++.++.++|.+||+.+|++|||+.++++.|+.+.
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 4566778999999999999999999999999998863
No 126
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.8e-40 Score=357.14 Aligned_cols=249 Identities=26% Similarity=0.349 Sum_probs=204.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
+.|+..+.||+|+||.||+|++..+|+.||+|++..... ....+.+..|..+++.+ +||||+++++++.+.+..++|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 346677799999999999999998999999999965421 23456788899999887 899999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 ~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 9999999999999875 4589999999999999999999998 99999999999999999999999999998643
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
.... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||..... ..+ .... ..+.
T Consensus 170 ~~~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~---~~~i-~~~~------ 234 (345)
T 1xjd_A 170 LGDA--KTNTFCGTPDYIAPEIL-LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EEL---FHSI-RMDN------ 234 (345)
T ss_dssp CTTC--CBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH---HHHH-HHCC------
T ss_pred cCCC--cccCCCCCcccCChhhh-cCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHH---HHHH-HhCC------
Confidence 2221 22456799999999988 556789999999999999999999999965322 111 1111 1111
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMA-EVVQ 827 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~-evl~ 827 (843)
+ .++.....++.+++.+|++.||++||++. |+++
T Consensus 235 ~---~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 235 P---FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp C---CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred C---CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 1 12344556788999999999999999998 7754
No 127
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=8.1e-39 Score=362.56 Aligned_cols=358 Identities=24% Similarity=0.321 Sum_probs=278.7
Q ss_pred CCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCcc
Q 003156 11 NNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNL 90 (843)
Q Consensus 11 ~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~ 90 (843)
.+++.+.++. ..+++|++|++++|.+..++. +..+++|++|+|++|.+++.++ +..+++|++|++++|.
T Consensus 33 ~~~~~~~i~~---~~l~~l~~L~l~~~~i~~l~~--~~~l~~L~~L~Ls~n~l~~~~~------~~~l~~L~~L~l~~n~ 101 (466)
T 1o6v_A 33 KTNVTDTVSQ---TDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITP------LKNLTKLVDILMNNNQ 101 (466)
T ss_dssp CSSTTSEECH---HHHHTCCEEECCSSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG------GTTCTTCCEEECCSSC
T ss_pred ccccccccCh---hHhccccEEecCCCCCccCcc--hhhhcCCCEEECCCCccCCchh------hhccccCCEEECCCCc
Confidence 3444444443 335677888888888877654 6777888888888888775432 6677888888888888
Q ss_pred CcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCC
Q 003156 91 FSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHW 170 (843)
Q Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 170 (843)
+.+..+ +..+++|++|+|++|.+++..+ +..+++|++|++++|.+++. + .+..+++|+.|+++ |.+.+..+
T Consensus 102 l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~-- 172 (466)
T 1o6v_A 102 IADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP-- 172 (466)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--
T ss_pred cccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--
Confidence 875443 7788888888888888875433 77788888888888887753 2 47778888888886 44443332
Q ss_pred ccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccc
Q 003156 171 IGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTL 250 (843)
Q Consensus 171 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~ 250 (843)
+.++++|++|++++|.+++. ..+..+++|+.|++++|.+.+..| .....+|+.|++++|.+.+. .....
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--------~~l~~ 241 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI--------GTLAS 241 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC--------GGGGG
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc--------hhhhc
Confidence 77888888888888887743 347778888888888888875444 11223688888888877642 13456
Q ss_pred cCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEE
Q 003156 251 FQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQ 330 (843)
Q Consensus 251 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 330 (843)
+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 7899999999999986554 8899999999999999987654 8889999999999999996544 88999999999
Q ss_pred cCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeecccccee
Q 003156 331 LDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIG 410 (843)
Q Consensus 331 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 410 (843)
+++|.+++..| +..+++|+.|++++|++++. ..+.++++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 99999998766 78999999999999999964 468999999999999999998877 8999999999999999997
Q ss_pred c
Q 003156 411 R 411 (843)
Q Consensus 411 ~ 411 (843)
.
T Consensus 390 ~ 390 (466)
T 1o6v_A 390 A 390 (466)
T ss_dssp C
T ss_pred C
Confidence 4
No 128
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.4e-40 Score=343.89 Aligned_cols=254 Identities=26% Similarity=0.345 Sum_probs=204.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcC--CeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTP--QLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV 630 (843)
+.|+..+.||+|+||.||+|++ +++.||||.+...... ...+.+.+|+.++++++||||+++++++.++ ...++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 4466777999999999999999 4899999998654322 2345789999999999999999999999887 678999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCC--eeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPP--IIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
|||+++|+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 9999999999999875 234689999999999999999999998 6 99999999999999999999999998764
Q ss_pred ccccccceeccccccccccCCcccccCcC--CCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSL--RVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
... ....||+.|+|||.+.... .++.++|||||||++|||++|+.||....... ........+.
T Consensus 163 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~-- 228 (271)
T 3kmu_A 163 FQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-----IGMKVALEGL-- 228 (271)
T ss_dssp TSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-----HHHHHHHSCC--
T ss_pred ecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-----HHHHHHhcCC--
Confidence 322 3346789999999884432 23348999999999999999999997543211 1111111111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 787 DCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 787 ~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
....+...+.++.+++.+||+.||++|||++|+++.|+.+.+
T Consensus 229 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 229 ------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 112344556678999999999999999999999999998864
No 129
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.6e-39 Score=352.49 Aligned_cols=247 Identities=22% Similarity=0.291 Sum_probs=206.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|++..+|+.||+|.+..... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 446677799999999999999988999999999865432 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 999999999999875 3589999999999999999999998 999999999999999999999999999986643
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
. .....||+.|+|||++ .+..++.++|||||||++|||++|+.||..... . ........ +..
T Consensus 194 ~-----~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~---~~~~~i~~-~~~------ 255 (350)
T 1rdq_E 194 R-----TWTLCGTPEALAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--I---QIYEKIVS-GKV------ 255 (350)
T ss_dssp C-----BCCCEECGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHH-CCC------
T ss_pred C-----cccccCCccccCHHHh-cCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--H---HHHHHHHc-CCC------
Confidence 2 1345789999999988 456789999999999999999999999975321 1 11111111 111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPS-----MAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs-----~~evl~~ 828 (843)
.++......+.+++.+||+.||++||+ ++|++++
T Consensus 256 ---~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 256 ---RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 134445667899999999999999998 8998875
No 130
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=361.20 Aligned_cols=274 Identities=20% Similarity=0.224 Sum_probs=216.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCC--eeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ--LKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lV~ 631 (843)
..|+..+.||+|+||.||+|.+..+|+.||||++.........+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 456777899999999999999998899999999976555556678899999999999999999999998765 679999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE----cCCCCcEEeeccCcc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL----DDNYNPRISDFGLAR 707 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl~~ 707 (843)
||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 9999999999998752 123489999999999999999999999 99999999999999 777889999999998
Q ss_pred cccccccceeccccccccccCCcccccC-------cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQ-------SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
....... .....||..|+|||++.. ...++.++|||||||++|||++|+.||.......... +.+....
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~-~~~~~~~ 240 (396)
T 4eut_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYKII 240 (396)
T ss_dssp ECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH-HHHHHHH
T ss_pred EccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH-HHHHHHh
Confidence 7654332 134578999999998733 1457789999999999999999999997543222221 2222222
Q ss_pred hhCCcc---cc------------cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 781 EEGNVL---DC------------VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 781 ~~~~~~---~~------------~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
...... .. .-+............+.+++.+||+.||++|||+.|+++.++.+...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 211100 00 00111124567778899999999999999999999999999887553
No 131
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-39 Score=345.70 Aligned_cols=259 Identities=26% Similarity=0.359 Sum_probs=213.6
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
...|+..+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 345677779999999999999998889999999986433 235678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 90 FMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp CCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred cCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 99999999999875 235689999999999999999999999 9999999999999999999999999999876543
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.. .......++..|+|||.+ ....++.++||||+|+++|||++ |..||...... .....+ ....
T Consensus 165 ~~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~----~~~~------- 229 (288)
T 3kfa_A 165 TY-TAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELL----EKDY------- 229 (288)
T ss_dssp SS-EEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH----HTTC-------
T ss_pred cc-ccccCCccccCcCChhhh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH----hccC-------
Confidence 32 222445667889999988 55578999999999999999999 99998654322 111111 1111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
....+...+..+.+++.+|++.||++|||+.|+++.|+.+..
T Consensus 230 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 230 -RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 112244556678999999999999999999999999987643
No 132
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.3e-40 Score=351.73 Aligned_cols=267 Identities=22% Similarity=0.326 Sum_probs=201.1
Q ss_pred hhhhhhcCeeccccceEEEEEEECC---CCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCe--
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGT---QGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQL-- 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-- 626 (843)
.+.|+..+.||+|+||.||+|.+.. +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 4567778899999999999998854 456899999865432 2234678999999999999999999999987653
Q ss_pred ---eEEEEEeCCCCCHHHHHhhcC--CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEe
Q 003156 627 ---KLLVSDYAPNGSLQAKLHERL--PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRIS 701 (843)
Q Consensus 627 ---~~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 701 (843)
.++||||+++|+|.+++.... .....+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEe
Confidence 489999999999999996532 2345699999999999999999999998 99999999999999999999999
Q ss_pred eccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHH
Q 003156 702 DFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 702 Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
|||+++...............++..|+|||.+ .+..++.++||||||+++|||++ |..||....... .... .
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~---~- 262 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL-ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYDY---L- 262 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHH-HSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHH---H-
T ss_pred ecCcceecccccccCcccccCCCccccCchhh-cCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHH---H-
Confidence 99999876544333333445678899999988 55678999999999999999999 888986543221 1111 1
Q ss_pred hhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCC
Q 003156 781 EEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 837 (843)
Q Consensus 781 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~ 837 (843)
..+. ....+...+..+.+++.+||+.||++|||+.+++++|+.+...+|
T Consensus 263 ~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 263 LHGH--------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp HTTC--------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HcCC--------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1111 112344556679999999999999999999999999999876554
No 133
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=8.5e-40 Score=363.56 Aligned_cols=258 Identities=21% Similarity=0.236 Sum_probs=207.1
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||+||+|++..+++.||+|++..... ....+.+.+|..++..++||||+++++++.+.+..++||
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~ 153 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence 456777899999999999999998899999999965321 122345889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++....
T Consensus 154 Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 154 DYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp CCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 999999999999874 35689999999999999999999998 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCccccc----CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 712 LDKHVMSNRFQSALGYVAPELTC----QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
... .......||+.|+|||++. ....++.++|||||||++|||++|+.||..... .......+.....
T Consensus 228 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~------ 299 (437)
T 4aw2_A 228 DGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-VETYGKIMNHKER------ 299 (437)
T ss_dssp TSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTHHHH------
T ss_pred CCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-hHHHHhhhhcccc------
Confidence 332 2224567999999999884 245689999999999999999999999975322 1122221111100
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSS--RPSMAEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~--RPs~~evl~~ 828 (843)
...+........++.+++.+|++.+|++ ||+++|++++
T Consensus 300 ---~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 300 ---FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---CCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---ccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0111122334567889999999888888 9999999886
No 134
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.6e-39 Score=359.54 Aligned_cols=275 Identities=19% Similarity=0.259 Sum_probs=208.7
Q ss_pred hhhhhhhcCeeccc--cceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 552 PETLLEKAAEVGEG--VFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 552 ~~~~~~~~~~ig~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
..+.|+..+.||+| +||.||+|++..+|+.||||++...... ...+.+.+|+.++++++|||||++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34567788899999 9999999999989999999999754322 23356788999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 103 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999998752 34589999999999999999999998 999999999999999999999999999875
Q ss_pred cccccc-----ceeccccccccccCCcccccCc-CCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhh
Q 003156 709 LTRLDK-----HVMSNRFQSALGYVAPELTCQS-LRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEE 782 (843)
Q Consensus 709 ~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~-~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 782 (843)
...... ........||..|+|||++... ..++.++|||||||++|||++|+.||.......... .........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~ 256 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPC 256 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH-HC-------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHhcCCCCc
Confidence 532211 1112334688899999988543 568999999999999999999999997643322211 111100000
Q ss_pred ---------C-------------Ccccc----------cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--
Q 003156 783 ---------G-------------NVLDC----------VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI-- 828 (843)
Q Consensus 783 ---------~-------------~~~~~----------~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~-- 828 (843)
. ...+. .+......+......+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~ 336 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 336 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence 0 00000 0000001233445678899999999999999999999976
Q ss_pred HHhc
Q 003156 829 LQVI 832 (843)
Q Consensus 829 L~~~ 832 (843)
++.+
T Consensus 337 f~~~ 340 (389)
T 3gni_B 337 FKQI 340 (389)
T ss_dssp GGGC
T ss_pred HHHH
Confidence 4444
No 135
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=344.37 Aligned_cols=257 Identities=22% Similarity=0.325 Sum_probs=207.5
Q ss_pred hhcCeeccccceEEEEEEEC--CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEeC
Q 003156 557 EKAAEVGEGVFGTVYKVSFG--TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYA 634 (843)
Q Consensus 557 ~~~~~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~ 634 (843)
...+.||+|+||.||+|.+. .++..||+|.+.........+.+.+|++++++++||||+++++++ ..+..++||||+
T Consensus 13 i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~ 91 (287)
T 1u59_A 13 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMA 91 (287)
T ss_dssp EEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECC
T ss_pred hhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeC
Confidence 33448999999999999864 367889999997654444456789999999999999999999999 455689999999
Q ss_pred CCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccccc
Q 003156 635 PNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDK 714 (843)
Q Consensus 635 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 714 (843)
++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 92 GGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp TTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred CCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999754 35689999999999999999999998 999999999999999999999999999987654332
Q ss_pred ce-eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 715 HV-MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 715 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
.. ......+|+.|+|||++ ....++.++||||||+++|||++ |+.||....... ... .+..+.
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~----~i~~~~-------- 230 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMA----FIEQGK-------- 230 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHH----HHHTTC--------
T ss_pred eeeccccccccccccCHHHh-ccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHH----HHhcCC--------
Confidence 21 22334568899999988 45578999999999999999998 999997543221 111 112221
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
....+...+.++.+++.+||+.||++|||+.|++++|+.+...
T Consensus 231 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 231 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1123455667899999999999999999999999999987543
No 136
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-39 Score=352.94 Aligned_cols=257 Identities=28% Similarity=0.422 Sum_probs=208.1
Q ss_pred ChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 551 DPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 551 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
++...|+..+.||+|+||.||+|+...+|+.||||++...... ...+.+.+|++++++++||||+++++++..++..+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 130 (348)
T 1u5q_A 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW 130 (348)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEE
Confidence 4556677888999999999999999889999999998654322 22356889999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+||||++ |++.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 131 lv~e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 203 (348)
T 1u5q_A 131 LVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI 203 (348)
T ss_dssp EEEECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred EEEecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCcee
Confidence 9999997 6888888764 35689999999999999999999999 999999999999999999999999999986
Q ss_pred ccccccceeccccccccccCCccccc--CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTC--QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
.... ....||+.|+|||++. ....++.++|||||||++|||++|+.||...... . ..........
T Consensus 204 ~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-~----~~~~~~~~~~-- 270 (348)
T 1u5q_A 204 MAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-S----ALYHIAQNES-- 270 (348)
T ss_dssp SSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-H----HHHHHHHSCC--
T ss_pred cCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-H----HHHHHHhcCC--
Confidence 5432 3457899999999874 2456899999999999999999999999654221 1 1111111111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 787 DCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 787 ~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
+.. .+......+.+++.+||+.||++|||++|++++..-..
T Consensus 271 ----~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 271 ----PAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp ----CCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred ----CCC--CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 111 12334556889999999999999999999998755443
No 137
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=366.95 Aligned_cols=328 Identities=19% Similarity=0.148 Sum_probs=198.9
Q ss_pred cCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEee
Q 003156 80 RLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVS 159 (843)
Q Consensus 80 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 159 (843)
++++|+|++|+|++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|..+++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 34444444444444444444444444444444444444444444444444444444444444434444444445555555
Q ss_pred cCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCC
Q 003156 160 NNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIP 239 (843)
Q Consensus 160 ~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p 239 (843)
+|++.+..+..|.++++|++|+|++|.+++..+..|.++++|+.|+|++|.+++..+..+.
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~------------------- 173 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS------------------- 173 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHT-------------------
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhc-------------------
Confidence 5544444445555555555555555555555555555555555555555555422111111
Q ss_pred CCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCcc
Q 003156 240 PGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQE 319 (843)
Q Consensus 240 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 319 (843)
.+++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+..+..+....+|++|+|++|++++..+..
T Consensus 174 ----------~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 243 (477)
T 2id5_A 174 ----------HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 243 (477)
T ss_dssp ----------TCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHH
T ss_pred ----------ccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHH
Confidence 1344555555555555555555666666666666666655555544444557777777777777444456
Q ss_pred ccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccc
Q 003156 320 VCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLL 399 (843)
Q Consensus 320 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 399 (843)
+..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 244 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 323 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLE 323 (477)
T ss_dssp HTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCC
T ss_pred hcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccC
Confidence 77788888888888888877777788888888888888888877788888888888888888888876677778888888
Q ss_pred eEeeccccceecCCCCCCCCCCCCCCcCCCCCCCCCC
Q 003156 400 AVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGICSPL 436 (843)
Q Consensus 400 ~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 436 (843)
.|++++|++++..+....+.......+.++...|..|
T Consensus 324 ~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 324 TLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp EEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred EEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 8888888887765533223334445677777777655
No 138
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-39 Score=340.61 Aligned_cols=256 Identities=25% Similarity=0.381 Sum_probs=209.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+. +++.||+|.+..... ..+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 34666779999999999999997 788999999865442 357899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp CTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 9999999999875 34689999999999999999999998 99999999999999999999999999998764322
Q ss_pred cceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 714 KHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 714 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
. .......++..|+|||.+ ....++.++||||+|+++|||++ |+.||...... ..... +..+..
T Consensus 159 ~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~-i~~~~~------- 223 (267)
T 3t9t_A 159 Y-TSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED-ISTGFR------- 223 (267)
T ss_dssp H-HSTTSTTCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH-HHTTCC-------
T ss_pred c-cccccccccccccChhhh-cCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----HHHHH-HhcCCc-------
Confidence 1 122344567889999988 55578999999999999999999 89998653221 11111 111111
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
...+......+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 224 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 224 -LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11233445678899999999999999999999999998754
No 139
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=9.7e-40 Score=352.48 Aligned_cols=264 Identities=27% Similarity=0.350 Sum_probs=209.4
Q ss_pred ChhhhhhhcCeeccccceEEEEEEECCCCeEE--EEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCee
Q 003156 551 DPETLLEKAAEVGEGVFGTVYKVSFGTQGRML--AVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLK 627 (843)
Q Consensus 551 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~v--avK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 627 (843)
...+.|+..+.||+|+||.||+|++..++..+ |+|.+.........+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 34456777889999999999999998778755 999987554444556799999999999 899999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhcC------------CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC
Q 003156 628 LLVSDYAPNGSLQAKLHERL------------PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN 695 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 695 (843)
++||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999998753 2235789999999999999999999998 99999999999999999
Q ss_pred CCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHH
Q 003156 696 YNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSE 774 (843)
Q Consensus 696 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~ 774 (843)
+.+||+|||+++...... ......++..|+|||.+ ....++.++|||||||++|||+| |+.||...... .
T Consensus 179 ~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~ 249 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----E 249 (327)
T ss_dssp GCEEECCTTCEESSCEEC---CC----CCTTTCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----H
T ss_pred CeEEEcccCcCccccccc---cccCCCCCccccChhhh-ccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----H
Confidence 999999999997433211 12334567889999988 55568999999999999999998 99999654221 1
Q ss_pred HHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 775 HVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 775 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
... .+..+. ....+.....++.+++.+||+.||++|||+.|++++|+.+...
T Consensus 250 ~~~-~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 250 LYE-KLPQGY--------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HHH-HGGGTC--------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHH-HhhcCC--------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111 111111 1123445567789999999999999999999999999887543
No 140
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-39 Score=347.11 Aligned_cols=262 Identities=26% Similarity=0.326 Sum_probs=204.2
Q ss_pred hhhhcCeeccccceEEEEEEECCC---CeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEc-CCeeEEE
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQ---GRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWT-PQLKLLV 630 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lV 630 (843)
.|+..+.||+|+||.||+|.+..+ +..||+|.+.........+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 356677899999999999997533 346899998654444445678999999999999999999999754 4577899
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 106 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccc
Confidence 9999999999999764 35689999999999999999999998 99999999999999999999999999998765
Q ss_pred ccccc--eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCC-CCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 711 RLDKH--VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGR-RPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 711 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
..... .......+|..|+|||.+ .+..++.++||||+|+++|||++|. .||.... ........ ..+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~~~~~~~-----~~~~--- 249 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFDITVYL-----LQGR--- 249 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-TTTHHHHH-----HTTC---
T ss_pred ccchhccccccCCCCCccccChHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-HHHHHHHH-----hcCC---
Confidence 43321 122345677889999988 5567899999999999999999954 4554332 22211111 1111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCC
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 837 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~ 837 (843)
....+...+..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 250 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 250 -----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred -----CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111234455678999999999999999999999999999866543
No 141
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.2e-40 Score=375.98 Aligned_cols=262 Identities=26% Similarity=0.396 Sum_probs=212.7
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
..+.|+..+.||+|+||.||+|.+. .+..||||++.... ...+.|.+|++++++++||||+++++++.+ +..++||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred chhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 3455677789999999999999997 56789999986543 345789999999999999999999999876 6689999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.++++... ...+++..++.++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 341 e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp CCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred ehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999998631 24589999999999999999999998 999999999999999999999999999987653
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
... .......++..|+|||++ ....++.++|||||||++|||++ |+.||...... +... .+..+...
T Consensus 416 ~~~-~~~~~~~~~~~y~aPE~~-~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~-~i~~~~~~---- 483 (535)
T 2h8h_A 416 NEY-TARQGAKFPIKWTAPEAA-LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD-QVERGYRM---- 483 (535)
T ss_dssp HHH-HTTCSTTSCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHH-HHHTTCCC----
T ss_pred Cce-ecccCCcCcccccCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH-HHHcCCCC----
Confidence 221 112334567889999988 45678999999999999999999 99999654221 1111 12222211
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCCC
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQ 838 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~~ 838 (843)
..+..+...+.++|.+||+.||++|||++++++.|+.+.....+
T Consensus 484 ----~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 484 ----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 12445667889999999999999999999999999998766543
No 142
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=357.78 Aligned_cols=253 Identities=21% Similarity=0.312 Sum_probs=206.0
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|....+|+.||+|.+..... .....+.+|+.++++++||||+++++++.+....++||||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457778899999999999999998999999999865432 2245788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc--CCCCcEEeeccCcccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD--DNYNPRISDFGLARLLTR 711 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgl~~~~~~ 711 (843)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 9999999999764 34689999999999999999999998 999999999999997 457899999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.... ....||+.|+|||++ ....++.++|||||||++|||++|+.||..... .. ........... .++
T Consensus 204 ~~~~---~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-~~----~~~~i~~~~~~---~~~ 271 (387)
T 1kob_A 204 DEIV---KVTTATAEFAAPEIV-DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LE----TLQNVKRCDWE---FDE 271 (387)
T ss_dssp TSCE---EEECSSGGGCCHHHH-TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HH----HHHHHHHCCCC---CCS
T ss_pred Ccce---eeeccCCCccCchhc-cCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-HH----HHHHHHhCCCC---CCc
Confidence 3221 334689999999988 556789999999999999999999999975322 11 11111111110 111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
........++.+++.+||+.||++|||+.|++++
T Consensus 272 ---~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 ---DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1223445678899999999999999999999986
No 143
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.7e-40 Score=353.62 Aligned_cols=246 Identities=20% Similarity=0.290 Sum_probs=205.3
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-------ChHHHHHHHHHHHhccCCCccceeeEEEcC
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-------YPEDFEREVRVLGKARHPNLISLEGYYWTP 624 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 624 (843)
..+.|+..+.||+|+||.||+|.+..+++.||||.+....... ..+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3456778889999999999999998899999999997653211 234677899999999999999999999999
Q ss_pred CeeEEEEEeCCCC-CHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeec
Q 003156 625 QLKLLVSDYAPNG-SLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDF 703 (843)
Q Consensus 625 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 703 (843)
+..++||||+.+| +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 999999864 4689999999999999999999999 9999999999999999999999999
Q ss_pred cCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhC
Q 003156 704 GLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEG 783 (843)
Q Consensus 704 gl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 783 (843)
|+++........ ....||+.|+|||++......+.++|||||||++|||++|+.||......
T Consensus 175 g~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------- 236 (335)
T 3dls_A 175 GSAAYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------- 236 (335)
T ss_dssp TTCEECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------
T ss_pred ccceECCCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------
Confidence 999876543322 34578999999998855444588999999999999999999999642110
Q ss_pred CcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 784 NVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 784 ~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.... ...+.....++.+++.+||+.||++|||+.|++++
T Consensus 237 -----~~~~-~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -----VEAA-IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----TTTC-CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----Hhhc-cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 11233345678899999999999999999999987
No 144
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-40 Score=357.08 Aligned_cols=265 Identities=26% Similarity=0.375 Sum_probs=209.8
Q ss_pred hhhhhcCeeccccceEEEEEEEC----CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC--Cee
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFG----TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP--QLK 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~ 627 (843)
..|+..+.||+|+||.||++.+. .+++.||||++.........+.+.+|++++++++||||+++++++.+. ...
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 34577889999999999888763 368899999997654334456789999999999999999999999874 567
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 8999999999999999864 389999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccc-eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCch---------hhHHHHHH
Q 003156 708 LLTRLDKH-VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV---------VILSEHVR 777 (843)
Q Consensus 708 ~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~---------~~l~~~~~ 777 (843)
........ .......+|..|+|||.+ .+..++.++||||||+++|||+||+.||....... ..-...+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECL-KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 261 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHh-cCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHH
Confidence 77543322 222445678889999988 55568899999999999999999999986432110 00011111
Q ss_pred HHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 778 VLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 778 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
.....+. ....+..++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 262 ~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 262 ELLERGE--------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp HHHHTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhccc--------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 1122111 1123455667899999999999999999999999999887543
No 145
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=352.73 Aligned_cols=260 Identities=26% Similarity=0.412 Sum_probs=202.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCC----CeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQ----GRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
..|+..+.||+|+||.||+|.+..+ +..||+|.+...........+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 3455667899999999999998643 346999998655433345678999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 99999999999999874 35689999999999999999999998 9999999999999999999999999999876
Q ss_pred cccccc-eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 710 TRLDKH-VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 710 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
...... .......+|..|+|||.+ ....++.++|||||||++|||++ |+.||...... . ... .+..+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~---~~~-~~~~~~~-- 268 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAI-SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--E---VMK-AINDGFR-- 268 (333)
T ss_dssp -------------CCCGGGSCHHHH-HSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--H---HHH-HHHTTCC--
T ss_pred ccccccccccCCCCccccccCchhc-ccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--H---HHH-HHHCCCc--
Confidence 543221 112233457789999988 55578999999999999999999 99999653221 1 111 1122111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
...+...+..+.+++.+||+.+|++|||+.|++++|+.+..
T Consensus 269 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 269 ------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11234556678999999999999999999999999988643
No 146
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-39 Score=366.29 Aligned_cols=250 Identities=24% Similarity=0.346 Sum_probs=207.2
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||.+..... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 346677899999999999999988999999999965422 234567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 96 E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICKN----GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTSS----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 999999999999764 4689999999999999999999998 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... .....||+.|+|||++......+.++||||+||++|||++|+.||...... ...... ..+..
T Consensus 169 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~~~i-~~~~~------ 233 (476)
T 2y94_A 169 GEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLFKKI-CDGIF------ 233 (476)
T ss_dssp TCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHHHHH-HTTCC------
T ss_pred ccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHHHHH-hcCCc------
Confidence 322 244578999999999855444578999999999999999999999754321 111111 11111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+......+.+++.+||+.||++|||+.|++++
T Consensus 234 ---~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 ---YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1233445578899999999999999999999986
No 147
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.3e-39 Score=345.71 Aligned_cols=257 Identities=26% Similarity=0.393 Sum_probs=214.2
Q ss_pred ccChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 549 SIDPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 549 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
...+.+.|+..+.||+|+||.||+|....+++.||+|.+.........+.+.+|+.++++++||||+++++++.+....+
T Consensus 17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 96 (303)
T 3a7i_A 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 96 (303)
T ss_dssp EECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE
Confidence 34567778888899999999999999988899999999976655556788999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+||||+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 168 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168 (303)
T ss_dssp EEEECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccccee
Confidence 99999999999999975 3589999999999999999999998 999999999999999999999999999987
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
...... ......|+..|+|||++ ....++.++||||||+++|||++|+.||...... .... .+.....
T Consensus 169 ~~~~~~--~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~----~~~~~~~--- 236 (303)
T 3a7i_A 169 LTDTQI--KRNTFVGTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLF----LIPKNNP--- 236 (303)
T ss_dssp CBTTBC--CBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHH----HHHHSCC---
T ss_pred cCcccc--ccCccCCCcCccCHHHH-hcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHH----HhhcCCC---
Confidence 654221 22455788999999988 5567899999999999999999999999653221 1111 1111111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 830 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~ 830 (843)
...+......+.+++.+||+.||++|||+.|++++..
T Consensus 237 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 237 -----PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp -----CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred -----CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 1123344567889999999999999999999998753
No 148
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.7e-39 Score=342.57 Aligned_cols=258 Identities=23% Similarity=0.318 Sum_probs=204.8
Q ss_pred hhhhhhcCeeccccceEEEEEEECC---CCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGT---QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
.+.|+..+.||+|+||.||+|.+.. ++..||+|.+.........+.+.+|+.++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 3556777899999999999999743 34569999986654434457789999999999999999999998654 5689
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 90 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 99999999999999875 34589999999999999999999998 9999999999999999999999999999876
Q ss_pred cccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
...... ......++..|+|||.+ ....++.++||||||+++|||++ |+.||....... .... +..+..
T Consensus 164 ~~~~~~-~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~----~~~~~~--- 232 (281)
T 3cc6_A 164 EDEDYY-KASVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGV----LEKGDR--- 232 (281)
T ss_dssp ----------CCCCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHH----HHHTCC---
T ss_pred cccccc-ccccCCCCcceeCchhh-ccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHH----HhcCCC---
Confidence 543221 22345567889999988 55678999999999999999998 999997543322 1111 111111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
...+...+..+.+++.+||+.||++|||+.|++++|+.+.
T Consensus 233 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 233 -----LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 1123345567889999999999999999999999998864
No 149
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.6e-39 Score=348.13 Aligned_cols=255 Identities=23% Similarity=0.297 Sum_probs=208.2
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-----ChHHHHHHHHHHHhccCCCccceeeEEEcCCe
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-----YPEDFEREVRVLGKARHPNLISLEGYYWTPQL 626 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 626 (843)
..+.|+..+.||+|+||.||+|.+..+|+.||+|.+....... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 4567888889999999999999998889999999997654322 35779999999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC----CcEEee
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY----NPRISD 702 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~D 702 (843)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 99999999999999999864 4689999999999999999999998 999999999999999887 799999
Q ss_pred ccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhh
Q 003156 703 FGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEE 782 (843)
Q Consensus 703 fgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~ 782 (843)
||+++....... .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||..... .. .......
T Consensus 163 fg~~~~~~~~~~---~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~----~~~~i~~- 232 (321)
T 2a2a_A 163 FGLAHEIEDGVE---FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QE----TLANITS- 232 (321)
T ss_dssp CTTCEECCTTCC---CCCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HH----HHHHHHT-
T ss_pred CccceecCcccc---ccccCCCCCccCcccc-cCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-HH----HHHHHHh-
Confidence 999987654322 2345689999999988 556789999999999999999999999965322 11 1111111
Q ss_pred CCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 783 GNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 783 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
... ..++ .........+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~--~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 233 VSY--DFDE---EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp TCC--CCCH---HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ccc--ccCh---hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 110 0000 0112344568899999999999999999999985
No 150
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.2e-40 Score=343.90 Aligned_cols=248 Identities=24% Similarity=0.321 Sum_probs=183.7
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.|+..+.||+|+||.||+|.+..+|+.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 14 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (275)
T 2eue_A 14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEeh
Confidence 36677899999999999999988999999999865432 2345678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+ ++++.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 94 ~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 94 YA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp CC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 99 77888888764 4589999999999999999999999 9999999999999999999999999999866543
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCC
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
.. .....||..|+|||.+......+.++||||+||++|||++|+.||..... . ..... +..+.
T Consensus 166 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~---~~~~~-~~~~~-------- 228 (275)
T 2eue_A 166 NF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--P---VLFKN-ISNGV-------- 228 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHH-HHHTC--------
T ss_pred cc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--H---HHHHH-HHhCC--------
Confidence 22 13456889999999885544457899999999999999999999965321 1 11111 11111
Q ss_pred CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 793 MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 793 l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...+......+.+++.+||+.||++|||++|++++
T Consensus 229 -~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 -YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 11234455678899999999999999999999886
No 151
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-39 Score=359.66 Aligned_cols=255 Identities=20% Similarity=0.263 Sum_probs=204.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|++..+++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 446677799999999999999998999999999865321 123356889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 149 E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220 (410)
T ss_dssp CCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred eCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence 999999999999764 488999999999999999999998 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcC---CCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSL---RVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
... .......||+.|+|||++.... .++.++|||||||++|||++|+.||..... ............. ...
T Consensus 221 ~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~~~~----~~~ 294 (410)
T 3v8s_A 221 EGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKIMNHKNS----LTF 294 (410)
T ss_dssp TSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTHHHH----CCC
T ss_pred CCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-hhHHHHHHhcccc----ccC
Confidence 322 2234668999999999884432 278899999999999999999999975322 2122221111100 000
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSS--RPSMAEVVQI 828 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~--RPs~~evl~~ 828 (843)
+ .......++.+++.+|+..+|++ ||+++|++++
T Consensus 295 --p----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 295 --P----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --C----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --C----CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 1 01234457889999999999988 9999999987
No 152
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.4e-39 Score=351.04 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=205.4
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
+.|+..+.||+|+||.||+|+...+|+.||+|.+..... ....+.+..|..+++.+ +||+|+++++++.+.+..++|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 346677799999999999999988899999999965421 23456788999999988 799999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 100 ~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999875 3589999999999999999999998 99999999999999999999999999998543
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
... .......||+.|+|||++ .+..++.++|||||||++|||++|+.||..... . ...+.... +.
T Consensus 173 ~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~---~~~~~i~~-~~------ 237 (353)
T 2i0e_A 173 WDG--VTTKTFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--D---ELFQSIME-HN------ 237 (353)
T ss_dssp CTT--CCBCCCCSCGGGCCHHHH-TTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHH-CC------
T ss_pred cCC--cccccccCCccccChhhh-cCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--H---HHHHHHHh-CC------
Confidence 211 123456799999999988 556789999999999999999999999965321 1 11122221 11
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPS-----MAEVVQI 828 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs-----~~evl~~ 828 (843)
..++.....++.+++.+|++.||++||+ ++|++++
T Consensus 238 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 ---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ---CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1234455667889999999999999995 5788765
No 153
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=340.54 Aligned_cols=251 Identities=23% Similarity=0.363 Sum_probs=187.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|....+|+.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 346777899999999999999988899999999865421 233567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999864 35689999999999999999999998 999999999999999999999999999986543
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... ......||..|+|||.+ .+..++.++||||||+++|||++|+.||........ + . .....
T Consensus 165 ~~~--~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~--------~-----~~~~~ 227 (278)
T 3cok_A 165 PHE--KHYTLCGTPNYISPEIA-TRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-L--------N-----KVVLA 227 (278)
T ss_dssp ------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------------CCSS
T ss_pred CCC--cceeccCCCCcCCcchh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-H--------H-----HHhhc
Confidence 221 11345688999999988 555788999999999999999999999975432210 0 0 00000
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
. ...+.....++.+++.+||+.||++|||++|++++
T Consensus 228 ~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 228 D-YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp C-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c-cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0 11234455678899999999999999999999875
No 154
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.6e-40 Score=358.62 Aligned_cols=269 Identities=15% Similarity=0.170 Sum_probs=203.0
Q ss_pred hhhhhcCeeccccceEEEEEEECCC-----CeEEEEEEeecCCcc----------cChHHHHHHHHHHHhccCCCcccee
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQ-----GRMLAVKKLVTSDII----------QYPEDFEREVRVLGKARHPNLISLE 618 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~ 618 (843)
+.|+..+.||+|+||.||+|.+..+ ++.||||.+...... .....+..|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 4567788999999999999999653 578999998654311 0112234455666777899999999
Q ss_pred eEEEcC----CeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc-
Q 003156 619 GYYWTP----QLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD- 693 (843)
Q Consensus 619 g~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~- 693 (843)
+++... ...++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 999764 4479999999 99999999874 35699999999999999999999999 999999999999999
Q ss_pred -CCCCcEEeeccCccccccccccee-----ccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCC
Q 003156 694 -DNYNPRISDFGLARLLTRLDKHVM-----SNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGED 767 (843)
Q Consensus 694 -~~~~~kl~Dfgl~~~~~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~ 767 (843)
.++.+||+|||+++.+........ .....||+.|+|||++ .+..++.++|||||||++|||+||+.||.....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAH-NGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHh-CCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 889999999999987654332211 1334589999999988 555689999999999999999999999985433
Q ss_pred chhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 768 NVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 768 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
..... ......... ...+.+++.+. ....+.++.+++..||+.+|++||++.++++.|+.+..
T Consensus 267 ~~~~~-~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 267 DPKYV-RDSKIRYRE-NIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp CHHHH-HHHHHHHHH-CHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred CHHHH-HHHHHHhhh-hHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 32222 111111111 11111111110 12335678899999999999999999999999987754
No 155
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=353.89 Aligned_cols=271 Identities=15% Similarity=0.162 Sum_probs=203.8
Q ss_pred hhhhhcCeeccccceEEEEEEECC---CCeEEEEEEeecCCcc----------cChHHHHHHHHHHHhccCCCccceeeE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGT---QGRMLAVKKLVTSDII----------QYPEDFEREVRVLGKARHPNLISLEGY 620 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~g~ 620 (843)
+.|+..+.||+|+||.||+|.+.. ++..||+|........ .....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 456777899999999999999976 6789999998654321 012346788889999999999999999
Q ss_pred EEc----CCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC
Q 003156 621 YWT----PQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY 696 (843)
Q Consensus 621 ~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 696 (843)
+.. ....++||||+ +|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 987 67789999999 99999999875 2689999999999999999999998 999999999999999877
Q ss_pred --CcEEeeccCcccccccccce-----eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCch
Q 003156 697 --NPRISDFGLARLLTRLDKHV-----MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV 769 (843)
Q Consensus 697 --~~kl~Dfgl~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~ 769 (843)
.+||+|||+++.+....... ......||..|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH-KGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH-HTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHh-cCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 99999999998765432211 11345789999999988 45578999999999999999999999996543333
Q ss_pred hhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCC
Q 003156 770 VILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 837 (843)
Q Consensus 770 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~ 837 (843)
.............-. ..+.... .....+.++.+++.+||+.||++|||+.++++.|+....+.+
T Consensus 268 ~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 331 (345)
T 2v62_A 268 VAVQTAKTNLLDELP--QSVLKWA--PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLG 331 (345)
T ss_dssp HHHHHHHHHHHHTTT--HHHHHHS--CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCC
T ss_pred HHHHHHHHhhccccc--HHHHhhc--cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCccc
Confidence 222222222111100 0000000 011445678999999999999999999999999998765543
No 156
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=346.16 Aligned_cols=269 Identities=25% Similarity=0.363 Sum_probs=204.5
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc--cCCCccceeeEEEcC----C
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA--RHPNLISLEGYYWTP----Q 625 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~~----~ 625 (843)
..+.|+..+.||+|+||.||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++... .
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 3466788889999999999999984 8999999985432 34556666666655 899999999999877 6
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcC-----CCCeeecCCCCCCEEEcCCCCcEE
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSF-----RPPIIHYNLKPSNILLDDNYNPRI 700 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl 700 (843)
..++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ +++|+||||||+||+++.++.+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 789999999999999999764 5899999999999999999999752 448999999999999999999999
Q ss_pred eeccCcccccccccce--eccccccccccCCcccccCcCCCCC------chhHHHHHHHHHHHHhC----------CCCC
Q 003156 701 SDFGLARLLTRLDKHV--MSNRFQSALGYVAPELTCQSLRVNE------KCDIYGFGVLILELVTG----------RRPV 762 (843)
Q Consensus 701 ~Dfgl~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~------~~Dv~S~Gvil~elltg----------~~p~ 762 (843)
+|||+++.+....... ......||..|+|||++.. ...+. ++|||||||++|||+|| +.||
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE-SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTT-CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhccc-ccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 9999997664432211 1234578999999998843 33344 49999999999999999 6666
Q ss_pred cCCCCchhhHHHHHHHHHhhCCcccccCCCCCC--CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCC
Q 003156 763 EYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGD--YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 837 (843)
Q Consensus 763 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~ 837 (843)
............. ....... ...+..+. ....+..++.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 263 ~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 263 HDLVPSDPSYEDM-REIVCIK----KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTTSCSSCCHHHH-HHHHTTS----CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhhcCCCCchhhh-HHHHhhh----ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 5432222222221 1111111 11222221 123677889999999999999999999999999999876543
No 157
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=355.80 Aligned_cols=248 Identities=25% Similarity=0.313 Sum_probs=197.5
Q ss_pred cCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEeCCCCC
Q 003156 559 AAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGS 638 (843)
Q Consensus 559 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gs 638 (843)
.+.||+|+||.||+|....+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 4579999999999999988999999999865432 335678999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE--cCCCCcEEeeccCcccccccccce
Q 003156 639 LQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL--DDNYNPRISDFGLARLLTRLDKHV 716 (843)
Q Consensus 639 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfgl~~~~~~~~~~~ 716 (843)
|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+......
T Consensus 173 L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~- 245 (373)
T 2x4f_A 173 LFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL- 245 (373)
T ss_dssp EHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC-
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc-
Confidence 99998764 34589999999999999999999998 99999999999999 56788999999999876543321
Q ss_pred eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCCC
Q 003156 717 MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDY 796 (843)
Q Consensus 717 ~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 796 (843)
....||+.|+|||++ ....++.++|||||||++|||++|+.||..... ... .......... ..+ ..
T Consensus 246 --~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~----~~~i~~~~~~--~~~----~~ 311 (373)
T 2x4f_A 246 --KVNFGTPEFLAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AET----LNNILACRWD--LED----EE 311 (373)
T ss_dssp --CCCCSSCTTCCHHHH-TTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHH----HHHHHHTCCC--SCS----GG
T ss_pred --ccccCCCcEeChhhc-cCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHH----HHHHHhccCC--CCh----hh
Confidence 345689999999988 556789999999999999999999999965422 111 1222221110 000 01
Q ss_pred ChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 797 PEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 797 ~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
......++.+++.+|++.||++|||+.|++++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 12345678899999999999999999999985
No 158
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=343.82 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=196.1
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
.+.|+..+.||+|+||+||+|.+..+|+.||||++...... .....+..|+..+.++ +||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 35677788999999999999999889999999997543221 2223455666666665 899999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+ +|+|.+++... ...++|..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 136 ~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred Eecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 9999 77999998876 35699999999999999999999998 99999999999999999999999999998664
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
.... .....||++|+|||++. + .++.++|||||||++|||++|..|+.... ... . +..+...
T Consensus 209 ~~~~---~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~----~-~~~~~~~---- 270 (311)
T 3p1a_A 209 TAGA---GEVQEGDPRYMAPELLQ-G-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQ----Q-LRQGYLP---- 270 (311)
T ss_dssp ---------CCCCCGGGCCGGGGG-T-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHH----H-HTTTCCC----
T ss_pred cCCC---CcccCCCccccCHhHhc-C-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHH----H-HhccCCC----
Confidence 3222 24456899999999874 3 68999999999999999999977764321 111 1 1111110
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..++.....++.+++.+||+.||++|||++|++++
T Consensus 271 ---~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 271 ---PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ---HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 01223345678999999999999999999999875
No 159
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=344.49 Aligned_cols=264 Identities=24% Similarity=0.315 Sum_probs=201.0
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
.|+..+.||+|+||.||+|.+..+|+.||+|++...... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 356677999999999999999888999999998654322 2235678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 84 CDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp CSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred CCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 9999999988764 4589999999999999999999999 99999999999999999999999999998765322
Q ss_pred cceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHH----------HHhhC
Q 003156 714 KHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRV----------LLEEG 783 (843)
Q Consensus 714 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~----------~~~~~ 783 (843)
.. .....||..|+|||++.....++.++||||+||++|||++|+.||...... .......+. .....
T Consensus 157 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 157 DY--YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV-DQLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred cc--cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhcccccccccccccc
Confidence 21 234568899999998866677899999999999999999999999654322 111111110 01111
Q ss_pred Cccccc-CCCCCC------CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 784 NVLDCV-DPSMGD------YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 784 ~~~~~~-d~~l~~------~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...... .+.... .......++.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 110000 000000 012345568899999999999999999999986
No 160
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=353.93 Aligned_cols=262 Identities=23% Similarity=0.275 Sum_probs=197.2
Q ss_pred hhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEeCC
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAP 635 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~ 635 (843)
|+..+.||+|+||.||+|.+..+++.||+|++...........+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 56677999999999999999889999999998654433333345679999999999999999999999999999999997
Q ss_pred CCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccccc
Q 003156 636 NGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKH 715 (843)
Q Consensus 636 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 715 (843)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 -~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 155 (324)
T 3mtl_A 84 -KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 155 (324)
T ss_dssp -EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred -cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-
Confidence 5999998875 34689999999999999999999998 999999999999999999999999999976543221
Q ss_pred eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC---ccccc---
Q 003156 716 VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN---VLDCV--- 789 (843)
Q Consensus 716 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~---~~~~~--- 789 (843)
......||..|+|||++.....++.++||||+||++|||++|+.||..... ...+....+ ...... .....
T Consensus 156 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~-~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 156 -TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-EEQLHFIFR-ILGTPTEETWPGILSNE 232 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHH-HHCCCCTTTSTTGGGCH
T ss_pred -ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHH-HhCCCChHhchhhhcch
Confidence 123456789999999886656789999999999999999999999975422 222222211 111100 00000
Q ss_pred ------CCCCC-----CCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 790 ------DPSMG-----DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 790 ------d~~l~-----~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.+... ........++.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 0112334568899999999999999999999986
No 161
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=359.17 Aligned_cols=257 Identities=21% Similarity=0.236 Sum_probs=204.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|+...+|+.||+|++..... ....+.+.+|..++..++||||+++++++.+.+..++||
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 456677799999999999999988999999999965321 122345889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... +..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 141 E~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp CCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred cCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 999999999999875 24689999999999999999999998 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccC------cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCc
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQ------SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNV 785 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 785 (843)
... .......||+.|+|||++.. ...++.++|||||||++|||++|+.||..... .......+... ..
T Consensus 215 ~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~~~-~~--- 288 (412)
T 2vd5_A 215 DGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-AETYGKIVHYK-EH--- 288 (412)
T ss_dssp TSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTHH-HH---
T ss_pred CCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-HHHHHHHHhcc-cC---
Confidence 322 22245679999999998842 34689999999999999999999999965322 11111111110 00
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 003156 786 LDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSR---PSMAEVVQI 828 (843)
Q Consensus 786 ~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~R---Ps~~evl~~ 828 (843)
...+..+.....++.+++.+|+. +|++| |+++|++++
T Consensus 289 -----~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 289 -----LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -----CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -----cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00111123445678899999999 99998 699999886
No 162
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.5e-40 Score=345.49 Aligned_cols=260 Identities=23% Similarity=0.348 Sum_probs=208.0
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEc--CCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWT--PQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lV 630 (843)
+.|+..+.||+|+||.||+|....+++.||+|.+...... ...+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 4566778999999999999999889999999999654322 234578899999999999999999998854 5678999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCC-----eeecCCCCCCEEEcCCCCcEEeeccC
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPP-----IIHYNLKPSNILLDDNYNPRISDFGL 705 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfgl 705 (843)
|||+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 999999999999987544456699999999999999999999998 7 99999999999999999999999999
Q ss_pred cccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCc
Q 003156 706 ARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNV 785 (843)
Q Consensus 706 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 785 (843)
++....... ......|+..|+|||.+ .+..++.++||||||+++|||++|+.||..... ..+. ..+..+..
T Consensus 163 ~~~~~~~~~--~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~----~~i~~~~~ 233 (279)
T 2w5a_A 163 ARILNHDTS--FAKTFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELA----GKIREGKF 233 (279)
T ss_dssp HHHC---CH--HHHHHHSCCTTCCHHHH-HCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----HHHHHTCC
T ss_pred heeeccccc--cccccCCCccccChHHh-ccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHH----HHHhhccc
Confidence 987643221 11345688999999988 455789999999999999999999999975421 1111 11222221
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 786 LDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 786 ~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
...+.....++.+++.+||+.||++|||+.|+++++....
T Consensus 234 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 234 --------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp --------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred --------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 1233455667899999999999999999999999876543
No 163
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.4e-40 Score=357.20 Aligned_cols=265 Identities=28% Similarity=0.385 Sum_probs=210.2
Q ss_pred hhhhhhcCeeccccceEEEEEEE----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEc--CCe
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSF----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWT--PQL 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~ 626 (843)
.+.|+..+.||+|+||.||+|++ ..+++.||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 45577788999999999999994 5578999999986543 2234668999999999999999999999874 456
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 88999999999999999874 23589999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccc-eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCch----------hhHHHH
Q 003156 707 RLLTRLDKH-VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV----------VILSEH 775 (843)
Q Consensus 707 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~----------~~l~~~ 775 (843)
+........ .......+|..|+|||.+ .+..++.++|||||||++|||++|+.||....... .... .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~ 252 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESL-SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS-R 252 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHH-H
T ss_pred eecccCCccceeeccCCccccccCHHHh-ccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHH-H
Confidence 876543322 222445678889999988 55568999999999999999999999986432110 0011 1
Q ss_pred HHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 776 VRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 776 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
+......+. ....+...+..+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 253 ~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 253 LLELLEEGQ--------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHHHHTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HHHHhhccc--------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111111111 112345566789999999999999999999999999998754
No 164
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.5e-39 Score=349.85 Aligned_cols=249 Identities=22% Similarity=0.372 Sum_probs=183.5
Q ss_pred cCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CCCccceeeEEEcCCeeEEEEEeCCCC
Q 003156 559 AAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HPNLISLEGYYWTPQLKLLVSDYAPNG 637 (843)
Q Consensus 559 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~g 637 (843)
.+.||+|+||.||+|.+..+++.||||.+... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 46799999999999999989999999998543 2467889999999997 999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC---CcEEeeccCccccccccc
Q 003156 638 SLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY---NPRISDFGLARLLTRLDK 714 (843)
Q Consensus 638 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgl~~~~~~~~~ 714 (843)
+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 92 ~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 92 ELFERIKKK----KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp BHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 999999874 4689999999999999999999998 999999999999998665 799999999986543222
Q ss_pred ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCch--hhHHHHHHHHHhhCCcccccCCC
Q 003156 715 HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV--VILSEHVRVLLEEGNVLDCVDPS 792 (843)
Q Consensus 715 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~~d~~ 792 (843)
......||..|+|||++ ....++.++||||+||++|||++|+.||....... ....+.... +..+.. .
T Consensus 165 --~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-i~~~~~------~ 234 (325)
T 3kn6_A 165 --PLKTPCFTLHYAAPELL-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK-IKKGDF------S 234 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH-HTTTCC------C
T ss_pred --cccccCCCcCccCHHHh-cCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH-HHcCCC------C
Confidence 12345679999999988 56678999999999999999999999997542211 111111111 111111 0
Q ss_pred CCC-CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 793 MGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 793 l~~-~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
... .......++.+++.+|++.||++|||++|++++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 000 112345678899999999999999999999876
No 165
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.4e-39 Score=340.01 Aligned_cols=259 Identities=26% Similarity=0.406 Sum_probs=209.0
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.+.|+..+.||+|+||.||+|.+. +++.||+|.+.... ...+.+.+|++++++++||||+++++++.. +..++||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 3456777889999999999999986 67889999986543 346789999999999999999999999864 4578999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 87 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp ECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999997641 23589999999999999999999998 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
... .......++..|+|||.+ ....++.++||||||+++|||++ |+.||...... +.... +..+..
T Consensus 162 ~~~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~-~~~~~~----- 228 (279)
T 1qpc_A 162 NEY-TAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQN-LERGYR----- 228 (279)
T ss_dssp SCE-ECCTTCCCCTTTSCHHHH-HHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHH-HHTTCC-----
T ss_pred ccc-ccccCCCCccCccChhhh-ccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHH-HhcccC-----
Confidence 322 222344567889999988 45578999999999999999999 89999653221 11111 111111
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
...+...+.++.+++.+||+.||++|||+.++++.|+.+...
T Consensus 229 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 229 ---MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 112344556789999999999999999999999999987544
No 166
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.5e-39 Score=346.00 Aligned_cols=251 Identities=23% Similarity=0.326 Sum_probs=196.1
Q ss_pred hhhhhhcCeeccccceEEEEEEEC---CCCeEEEEEEeecCCc---ccChHHHHHHHHHHHhccCCCccceeeEEEcCCe
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFG---TQGRMLAVKKLVTSDI---IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQL 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 626 (843)
.+.|+..+.||+|+||.||+|+.. .+|+.||+|++..... ......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 345777889999999999999984 5789999999865432 1234567889999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 99999999999999999875 3588999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
+....... ......||+.|+|||++ ....++.++|||||||++|||++|+.||..... . ......... .
T Consensus 169 ~~~~~~~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~----~~~~~i~~~-~-- 237 (327)
T 3a62_A 169 KESIHDGT--VTHTFCGTIEYMAPEIL-MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-K----KTIDKILKC-K-- 237 (327)
T ss_dssp ------------CTTSSCCTTSCHHHH-TTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-H----HHHHHHHHT-C--
T ss_pred cccccCCc--cccccCCCcCccCHhhC-cCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-H----HHHHHHHhC-C--
Confidence 75432221 22456789999999988 555789999999999999999999999975422 1 111222111 1
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003156 787 DCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRP-----SMAEVVQI 828 (843)
Q Consensus 787 ~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RP-----s~~evl~~ 828 (843)
..++......+.+++.+||+.||++|| ++.|++++
T Consensus 238 -------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 -------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 112344556788999999999999999 78898875
No 167
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.4e-39 Score=337.48 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=207.1
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
..+.|+..+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 4567788889999999999999999889999999986543 234678999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE---cCCCCcEEeeccCccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL---DDNYNPRISDFGLARL 708 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~ 708 (843)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 86 ELCTGGELFERVVHK----RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp ECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred eccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 999999999999875 4589999999999999999999998 99999999999999 7889999999999987
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
...... .....||..|+|||.+. + .++.++||||||+++|||++|+.||...... .. ... +..+..
T Consensus 159 ~~~~~~---~~~~~~t~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~----~~~-~~~~~~--- 224 (277)
T 3f3z_A 159 FKPGKM---MRTKVGTPYYVSPQVLE-G-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-EV----MLK-IREGTF--- 224 (277)
T ss_dssp CCTTSC---BCCCCSCTTTCCHHHHT-T-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HH----HHH-HHHCCC---
T ss_pred ccCccc---hhccCCCCCccChHHhc-c-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH-HH----HHH-HHhCCC---
Confidence 654322 24457899999999873 3 4899999999999999999999999754321 11 111 111111
Q ss_pred cCCCCCCCCh----hhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 789 VDPSMGDYPE----DEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 789 ~d~~l~~~~~----~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+. .....+.+++.+|++.||++|||+.|++++
T Consensus 225 ------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 225 ------TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ------CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111 335678899999999999999999999975
No 168
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=9.1e-39 Score=339.82 Aligned_cols=264 Identities=14% Similarity=0.159 Sum_probs=208.7
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEE-EcCCeeEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYY-WTPQLKLLVS 631 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~lV~ 631 (843)
.+.|+..+.||+|+||.||+|++..+|+.||||.+.... ..+.+.+|+.+++.++|++++..++++ ...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 455777889999999999999998899999999986543 235789999999999998877777666 5566789999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE---cCCCCcEEeeccCccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL---DDNYNPRISDFGLARL 708 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~ 708 (843)
||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999 99999999864 34689999999999999999999999 99999999999999 4889999999999987
Q ss_pred ccccccce-----eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCc--hhhHHHHHHHHHh
Q 003156 709 LTRLDKHV-----MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDN--VVILSEHVRVLLE 781 (843)
Q Consensus 709 ~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~--~~~l~~~~~~~~~ 781 (843)
........ ......||..|+|||.+ .+..++.++|||||||++|||++|+.||...... ...+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTH-LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCChhhh-cCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC
Confidence 65433211 12455789999999998 5567899999999999999999999999764221 1122222221111
Q ss_pred hCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 782 EGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 782 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
. .. . ......+.++.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 237 ~-~~-~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 237 T-PI-E-------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp S-CH-H-------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred C-ch-H-------HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 1 00 0 011234457889999999999999999999999999875443
No 169
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=352.98 Aligned_cols=255 Identities=19% Similarity=0.315 Sum_probs=197.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccC--CCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARH--PNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lV 630 (843)
..|+..+.||+|+||.||+|... +++.||||++...... ...+.+.+|+.++++++| |||+++++++.+++..++|
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 44677789999999999999985 7899999998654322 233678899999999976 9999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|| +.+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 4688999999875 4689999999999999999999998 999999999999997 5789999999998775
Q ss_pred ccccceeccccccccccCCcccccC----------cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQ----------SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~----------~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
............||+.|+|||++.. ...++.++|||||||++|||++|+.||.........+ ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~~~~ 234 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----HAII 234 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH----HHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHH----HHHh
Confidence 5443333345679999999998732 2568899999999999999999999997543322111 1111
Q ss_pred hhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003156 781 EEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 830 (843)
Q Consensus 781 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~ 830 (843)
.... ...++......+.+++.+||+.||++|||+.|++++-.
T Consensus 235 ~~~~--------~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 235 DPNH--------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CTTS--------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred cCCc--------ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 1110 11233444557889999999999999999999998743
No 170
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.6e-39 Score=366.56 Aligned_cols=255 Identities=27% Similarity=0.325 Sum_probs=208.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|+...+|+.||+|++..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 446667799999999999999988999999999965422 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 264 Ey~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp CCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 9999999999998752 34589999999999999999999999 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||....... ...... ..+....
T Consensus 339 ~~~---~~~~~GT~~Y~APEvl-~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~-~~i~~~~------- 405 (576)
T 2acx_A 339 GQT---IKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVE-RLVKEVP------- 405 (576)
T ss_dssp TCC---EECCCSCGGGCCHHHH-TTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHH-HHHHHCC-------
T ss_pred Ccc---ccccCCCccccCHHHH-cCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHH-HHhhccc-------
Confidence 322 1345799999999988 55578999999999999999999999997643211 111111 1111111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRP-----SMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RP-----s~~evl~~ 828 (843)
..++.....++.+++.+|++.||++|| +++|++++
T Consensus 406 --~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 406 --EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 123344556788999999999999999 78999875
No 171
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.3e-39 Score=338.89 Aligned_cols=254 Identities=24% Similarity=0.339 Sum_probs=205.7
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
.+.|+..+.||+|+||.||+|.+..+|+.||+|++...... ...+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 34567778999999999999999989999999998654422 23356889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC---cEEeeccCccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN---PRISDFGLARL 708 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl~~~ 708 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 999999999998875 4589999999999999999999998 9999999999999986655 99999999976
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
...... .....||..|+|||.+ .+..++.++||||+|+++|||++|+.||...... ... .. +..+... .
T Consensus 158 ~~~~~~---~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~---~~-~~~~~~~-~ 226 (284)
T 3kk8_A 158 VNDSEA---WHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLY---AQ-IKAGAYD-Y 226 (284)
T ss_dssp CCSSCB---CCCSCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH---HH-HHHTCCC-C
T ss_pred cccCcc---ccCCCCCcCCcCchhh-cCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHH---HH-HHhcccc-C
Confidence 653222 1345789999999988 5567899999999999999999999999653221 111 11 1111111 1
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+ ........+.+++.+|++.||++|||+.|++++
T Consensus 227 ~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 PSP----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CTT----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred Cch----hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 011 122345568899999999999999999999986
No 172
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.2e-39 Score=341.44 Aligned_cols=249 Identities=27% Similarity=0.421 Sum_probs=203.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 88 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence 446777899999999999999998899999999865321 234567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 89 e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 89 EYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred ecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 999999999999875 4589999999999999999999998 999999999999999999999999999865443
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.. .....|+..|+|||.+ .+..++.++||||+|+++|||++|+.||...... ...... ....
T Consensus 162 ~~----~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~-~~~~------- 223 (279)
T 3fdn_A 162 SR----RTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-----ETYKRI-SRVE------- 223 (279)
T ss_dssp ----------CCCCTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHH-HHTC-------
T ss_pred cc----ccccCCCCCccCHhHh-ccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-----HHHHHH-HhCC-------
Confidence 22 1345788999999988 5567899999999999999999999999643211 111111 1111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
..++......+.+++.+||+.||++|||++|++++-
T Consensus 224 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 224 --FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp --CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred --CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 112344556788999999999999999999999874
No 173
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=9.9e-39 Score=347.09 Aligned_cols=265 Identities=25% Similarity=0.341 Sum_probs=209.9
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHh--ccCCCccceeeEEEcCC----e
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGK--ARHPNLISLEGYYWTPQ----L 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~----~ 626 (843)
.+.|+..+.||+|+||.||+|.+ +|+.||||.+... ....+.+|++++.. ++||||+++++++.... .
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 35677788999999999999998 5899999998543 24678889999988 68999999999998876 7
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhh--------hcCCCCeeecCCCCCCEEEcCCCCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLH--------HSFRPPIIHYNLKPSNILLDDNYNP 698 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~ 698 (843)
.++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCE
T ss_pred eEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCE
Confidence 89999999999999999763 4899999999999999999999 66 99999999999999999999
Q ss_pred EEeeccCcccccccccce--eccccccccccCCcccccCcC-----CCCCchhHHHHHHHHHHHHhC----------CCC
Q 003156 699 RISDFGLARLLTRLDKHV--MSNRFQSALGYVAPELTCQSL-----RVNEKCDIYGFGVLILELVTG----------RRP 761 (843)
Q Consensus 699 kl~Dfgl~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~-----~~~~~~Dv~S~Gvil~elltg----------~~p 761 (843)
||+|||+++......... ......||..|+|||++.... .++.++|||||||++|||+|| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998765433221 224557899999999884432 233689999999999999999 778
Q ss_pred CcCCCCchhhHHHHHHHHHhhCCcccccCCCCCC--CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 762 VEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGD--YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 762 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
|............+.... ... ...+..+. ...++...+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVV-CEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTSCSSCCHHHHHHHH-TTS----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccccCcCcccHHHHHHHH-HHH----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 865433222222222222 111 12222222 23466778999999999999999999999999999986543
No 174
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.9e-39 Score=341.69 Aligned_cols=258 Identities=24% Similarity=0.345 Sum_probs=203.9
Q ss_pred hhhhhcC-eeccccceEEEEEEE--CCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 554 TLLEKAA-EVGEGVFGTVYKVSF--GTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 554 ~~~~~~~-~ig~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
..|+..+ .||+|+||.||+|.+ ..+++.||||.+...... ...+.+.+|+.++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4455555 899999999999965 446789999998654322 2246789999999999999999999999 5567889
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 95 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 99999999999999874 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccce-eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 710 TRLDKHV-MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 710 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
....... ......++..|+|||.+ ....++.++||||||+++|||++ |+.||...... ... ..+..+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~----~~~~~~~~-- 238 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVT----AMLEKGER-- 238 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHH----HHHHTTCC--
T ss_pred ccCCCcccccccCCCCceeeChHHh-ccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHH----HHHHcCCC--
Confidence 5433222 12234467889999988 45568899999999999999999 99999754321 111 11222211
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
...+...+..+.+++.+||+.||++|||+.|+++.|+.+-.
T Consensus 239 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 239 ------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 12344566789999999999999999999999999988643
No 175
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.7e-39 Score=339.63 Aligned_cols=264 Identities=14% Similarity=0.159 Sum_probs=205.5
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEE-EcCCeeEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYY-WTPQLKLLV 630 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~lV 630 (843)
..+.|+..+.||+|+||.||+|.+..+++.||||.+..... ...+.+|+.+++.++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 34567788899999999999999988999999998754432 24588899999999998888777766 556778999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE---cCCCCcEEeeccCcc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL---DDNYNPRISDFGLAR 707 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~ 707 (843)
|||+ +|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEcc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 9999 99999999864 34689999999999999999999999 99999999999999 789999999999998
Q ss_pred cccccccc-----eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCc--hhhHHHHHHHHH
Q 003156 708 LLTRLDKH-----VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDN--VVILSEHVRVLL 780 (843)
Q Consensus 708 ~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~--~~~l~~~~~~~~ 780 (843)
........ .......||..|+|||.+ .+..++.++|||||||++|||++|+.||...... ...+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTH-LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHh-cCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc
Confidence 76543321 122356789999999988 5557899999999999999999999999764322 112222211111
Q ss_pred hhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 781 EEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 781 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
.. .. . ......+.++.+++.+||+.||++|||++|+++.|+.+...
T Consensus 236 ~~-~~-~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 236 ST-PI-E-------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HS-CH-H-------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred cc-hh-h-------hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 11 00 0 01122345789999999999999999999999999887543
No 176
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.9e-39 Score=364.94 Aligned_cols=258 Identities=24% Similarity=0.316 Sum_probs=210.2
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|++..+|+.||+|++..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 445666789999999999999988999999999965432 234567889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999987654456799999999999999999999998 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||....... ......+.... ..
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l-~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~~-~~------- 409 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELL-LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVLE-QA------- 409 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHHH-CC-------
T ss_pred CCc--ccccccCCccccChhhh-cCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHhh-cc-------
Confidence 322 12345799999999998 55678999999999999999999999997643211 11122222221 11
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSM-----AEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~-----~evl~~ 828 (843)
..++......+.+++.+|++.||++||++ +|++++
T Consensus 410 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 410 --VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred --cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 12344556678899999999999999975 677653
No 177
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.7e-40 Score=353.03 Aligned_cols=263 Identities=20% Similarity=0.278 Sum_probs=198.0
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhccCCCccceeeEEEcCCe----
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKARHPNLISLEGYYWTPQL---- 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---- 626 (843)
.+.|+..+.||+|+||.||+|.+..+++.||||++...... ...+.+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35577788999999999999999889999999998654322 223568899999999999999999999876543
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||+++|+|.++++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 38999999999999999875 4589999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccc-eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCc
Q 003156 707 RLLTRLDKH-VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNV 785 (843)
Q Consensus 707 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 785 (843)
+.+...... .......||+.|+|||++ .+..++.++|||||||++|||++|+.||....... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~~~~~~~ 237 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQA-RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAYQHVREDPI 237 (311)
T ss_dssp ------------------CCTTCCHHHH-HTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHCCCC
T ss_pred ccccccccccccccccCcCcccCCHHHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhcCCCC
Confidence 876543222 122345689999999988 45578999999999999999999999996543211 11111111110
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHH-HHHhccC
Q 003156 786 LDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQ-ILQVIKT 834 (843)
Q Consensus 786 ~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~-~L~~~~~ 834 (843)
.. .......+.++.+++.+||+.||++||++.+++. .+.+...
T Consensus 238 ~~------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 238 PP------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp CH------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred Cc------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 00 0012234567889999999999999997766654 4655543
No 178
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.7e-39 Score=344.10 Aligned_cols=250 Identities=20% Similarity=0.290 Sum_probs=204.3
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
.+.|+..+.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 4567778899999999999999988999999999875432 22346788999999999 999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC----------------
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---------------- 694 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---------------- 694 (843)
|||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999987533335689999999999999999999998 9999999999999984
Q ss_pred ---CCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhh
Q 003156 695 ---NYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVI 771 (843)
Q Consensus 695 ---~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~ 771 (843)
...+||+|||.++..... ....||..|+|||.+.....++.++|||||||++|||++|..|+.... .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~ 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----Q 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----H
T ss_pred cCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----H
Confidence 447999999999866532 233588999999998555567789999999999999999987764321 1
Q ss_pred HHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 772 LSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 772 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
... +..+ .....+......+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~-----~~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHE-----IRQG--------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHH-----HHTT--------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHH-----HHcC--------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111 1111 1122344556678999999999999999999999876
No 179
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.1e-39 Score=356.13 Aligned_cols=254 Identities=19% Similarity=0.323 Sum_probs=198.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhcc--CCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKAR--HPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~lV 630 (843)
..|+..+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.++++++ ||||+++++++...+..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 34777889999999999999987 599999999865432 223467899999999996 59999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|| +.+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 135 ~E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 5688999999875 3688899999999999999999998 999999999999996 5899999999998775
Q ss_pred ccccceeccccccccccCCcccccC----------cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQ----------SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~----------~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
............||+.|+|||++.. ...++.++|||||||++|||++|+.||......... +....
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~----~~~~~ 281 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK----LHAII 281 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH----HHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH----HHHHh
Confidence 4433333345679999999998743 236889999999999999999999999754332211 11111
Q ss_pred hhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 781 EEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 781 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
.... . ..++.....++.+++.+||+.||++|||+.|++++-
T Consensus 282 ~~~~-----~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 282 DPNH-----E---IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CTTS-----C---CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred Cccc-----c---CCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 1111 0 112333345788999999999999999999999874
No 180
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1e-39 Score=367.35 Aligned_cols=251 Identities=25% Similarity=0.290 Sum_probs=198.2
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC--cccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD--IIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
.+.|+..+.||+|+||.||+|....+|+.||||++.... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 355777889999999999999999899999999986542 223345678899999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhh-cCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHH-SFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999999875 468999999999999999999998 7 9999999999999999999999999999864
Q ss_pred cccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
..... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||..... .. ........ .
T Consensus 300 ~~~~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~---~~~~i~~~-~----- 365 (446)
T 4ejn_A 300 IKDGA--TMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EK---LFELILME-E----- 365 (446)
T ss_dssp CC-------CCSSSCGGGCCHHHH-HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HHHHHHHC-C-----
T ss_pred cCCCc--ccccccCCccccCHhhc-CCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HH---HHHHHHhC-C-----
Confidence 33221 22456799999999988 556789999999999999999999999965322 11 11111111 1
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRP-----SMAEVVQI 828 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RP-----s~~evl~~ 828 (843)
..++.....++.+++.+||+.||++|| |++|++++
T Consensus 366 ----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 ----IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 113444556788999999999999999 99999875
No 181
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=344.80 Aligned_cols=263 Identities=24% Similarity=0.288 Sum_probs=202.2
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc----ccChHHHHHHHHHHHhcc---CCCccceeeEEEcCC-
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI----IQYPEDFEREVRVLGKAR---HPNLISLEGYYWTPQ- 625 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~- 625 (843)
+.|+..+.||+|+||+||+|++..+++.||+|++..... ......+.+|+.++++++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 456777899999999999999988999999999864321 123457788888888775 999999999998765
Q ss_pred ----eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEe
Q 003156 626 ----LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRIS 701 (843)
Q Consensus 626 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 701 (843)
..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4789999996 69999998753 33489999999999999999999999 99999999999999999999999
Q ss_pred eccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHh
Q 003156 702 DFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLE 781 (843)
Q Consensus 702 Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~ 781 (843)
|||+++...... ......||..|+|||++ ....++.++|||||||++|||++|+.||..... ...+...... ..
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~-~~ 236 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAPEVL-LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFDL-IG 236 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCHHHH-HTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-HHHHHHHHHH-HC
T ss_pred eCccccccCCCc---ccCCccccccccCchHH-cCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHH-hC
Confidence 999998664322 22456789999999988 455689999999999999999999999965422 2222222221 11
Q ss_pred hCCccc----------ccCCCCC----CCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 782 EGNVLD----------CVDPSMG----DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 782 ~~~~~~----------~~d~~l~----~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...... .+.+... ....+....+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000000 0000000 0112345678899999999999999999999986
No 182
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-40 Score=355.11 Aligned_cols=265 Identities=25% Similarity=0.341 Sum_probs=189.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHh--ccCCCccceeeEEEcCC----ee
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGK--ARHPNLISLEGYYWTPQ----LK 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~----~~ 627 (843)
+.|+..+.||+|+||.||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++.... ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 3466778999999999999987 4889999998543 34677888888887 78999999999998776 78
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhh--------hcCCCCeeecCCCCCCEEEcCCCCcE
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLH--------HSFRPPIIHYNLKPSNILLDDNYNPR 699 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~k 699 (843)
++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+|
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 9999999999999999764 4788899999999999999999 66 999999999999999999999
Q ss_pred EeeccCcccccccccce--eccccccccccCCcccccCcC-----CCCCchhHHHHHHHHHHHHhC----------CCCC
Q 003156 700 ISDFGLARLLTRLDKHV--MSNRFQSALGYVAPELTCQSL-----RVNEKCDIYGFGVLILELVTG----------RRPV 762 (843)
Q Consensus 700 l~Dfgl~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~-----~~~~~~Dv~S~Gvil~elltg----------~~p~ 762 (843)
|+|||+++......... ......||+.|+|||++.... .++.++|||||||++|||+|| +.||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 99999998765433221 123447899999999884432 234689999999999999999 6666
Q ss_pred cCCCCchhhHHHHHHHHHhhCCcccccCCCCCC--CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCC
Q 003156 763 EYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGD--YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 837 (843)
Q Consensus 763 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~ 837 (843)
................. .. ....+..+. ....+...+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 229 YDLVPSDPSVEEMRKVV-CE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp TTTCC-CCCCC-CHHHH-TT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred cccCCCCccHHHHHHHH-HH----hhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 54322111111111111 11 111222221 123566789999999999999999999999999999877654
No 183
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.4e-39 Score=351.16 Aligned_cols=271 Identities=21% Similarity=0.226 Sum_probs=207.1
Q ss_pred ChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC----cccChHHHHHHHHHHHhccCCCccceeeEEEcCCe
Q 003156 551 DPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD----IIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQL 626 (843)
Q Consensus 551 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 626 (843)
...+.|+..+.||+|+||.||+|.+..+++.||+|.+.... .....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 102 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY 102 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence 34566788889999999999999998899999999986542 12334678999999999999999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCC------------------------------------CCCCChhHHHHHHHHHHHHHH
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPS------------------------------------TPPLSWTNRFKVILGTAKGLA 670 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~l~ 670 (843)
.++||||+++|+|.+++...... ...+++..+..++.|++.||+
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 182 (345)
T 3hko_A 103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH 182 (345)
T ss_dssp EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 99999999999999999631100 112356778899999999999
Q ss_pred hhhhcCCCCeeecCCCCCCEEEcCCC--CcEEeeccCccccccccc--ceeccccccccccCCcccccC-cCCCCCchhH
Q 003156 671 HLHHSFRPPIIHYNLKPSNILLDDNY--NPRISDFGLARLLTRLDK--HVMSNRFQSALGYVAPELTCQ-SLRVNEKCDI 745 (843)
Q Consensus 671 ~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfgl~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-~~~~~~~~Dv 745 (843)
|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||++.. ...++.++||
T Consensus 183 ~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 183 YLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 99999 999999999999998766 899999999987643222 112245678999999998743 2568899999
Q ss_pred HHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHH
Q 003156 746 YGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEV 825 (843)
Q Consensus 746 ~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~ev 825 (843)
|||||++|||++|+.||...... . ............ .. .........+.+++.+||+.||++|||+.|+
T Consensus 260 wslG~il~el~~g~~pf~~~~~~-~----~~~~~~~~~~~~--~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVNDA-D----TISQVLNKKLCF--EN----PNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH-H----HHHHHHHCCCCT--TS----GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCChH-H----HHHHHHhccccc--CC----cccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 99999999999999999654322 1 111222211100 00 0112345678899999999999999999999
Q ss_pred HHH--HHhccCC
Q 003156 826 VQI--LQVIKTP 835 (843)
Q Consensus 826 l~~--L~~~~~~ 835 (843)
+++ ++.+...
T Consensus 329 l~hp~~~~~~~~ 340 (345)
T 3hko_A 329 LQHPWISQFSDK 340 (345)
T ss_dssp HHSHHHHTTSSC
T ss_pred hcChhhccChHh
Confidence 986 5554443
No 184
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.3e-39 Score=354.74 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=191.7
Q ss_pred CeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEc----CCeeEEEEEeC
Q 003156 560 AEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWT----PQLKLLVSDYA 634 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~----~~~~~lV~e~~ 634 (843)
+.||+|+||.||+|.+..+|+.||||++.. ...+.+|+.++.+. +||||+++++++.. ....++||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence 579999999999999998999999999853 24677899887554 89999999999865 45689999999
Q ss_pred CCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC---CCCcEEeeccCcccccc
Q 003156 635 PNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---NYNPRISDFGLARLLTR 711 (843)
Q Consensus 635 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~~~~ 711 (843)
++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 142 ~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 142 DGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred CCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 9999999998752 34689999999999999999999998 9999999999999997 78999999999986543
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchh--hHHHHHHHHHhhCCccccc
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVV--ILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~ 789 (843)
.. ......||..|+|||++ ....++.++|||||||++|||++|+.||........ ..... +..+... ..
T Consensus 217 ~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~----i~~~~~~-~~ 287 (400)
T 1nxk_A 217 HN---SLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYE-FP 287 (400)
T ss_dssp -------------CTTCCGGGS-CCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH----HHHTCCC-CC
T ss_pred CC---ccccCCCCCCccCHhhc-CCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH----HHcCccc-CC
Confidence 22 12455789999999998 566789999999999999999999999975432211 11111 1111111 00
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQV 831 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~ 831 (843)
.+ .......++.+++.+||+.||++|||+.|++++-.-
T Consensus 288 ~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~ 325 (400)
T 1nxk_A 288 NP----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325 (400)
T ss_dssp TT----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred Cc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence 11 123445678899999999999999999999997543
No 185
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.4e-39 Score=343.20 Aligned_cols=257 Identities=21% Similarity=0.274 Sum_probs=192.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccCh-HHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYP-EDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+..+|+.||+|++......... +.+.++...++.++||||+++++++.+++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 4567778999999999999999889999999998654322222 234455556788899999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|++ |+|.+++.........+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 997 5898888764334567999999999999999999999853 8999999999999999999999999999876542
Q ss_pred ccceeccccccccccCCcccc---cCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 713 DKHVMSNRFQSALGYVAPELT---CQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~---~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
.. .....||..|+|||.+ .....++.++||||+||++|||++|+.||.........+.. .......
T Consensus 164 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~---- 232 (290)
T 3fme_A 164 VA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ----VVEEPSP---- 232 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH----HHHSCCC----
T ss_pred cc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH----HhccCCC----
Confidence 22 2334688999999986 24556889999999999999999999999754333222222 1221111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
. ........++.+++.+||+.||++|||+.|++++
T Consensus 233 --~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 233 --Q--LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --C--CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --C--cccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 0 1123445678899999999999999999999884
No 186
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.7e-38 Score=356.60 Aligned_cols=359 Identities=28% Similarity=0.344 Sum_probs=206.0
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCC-------------CEEECCCCCCccccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSL-------------NTLNLSNNHFSGDLD 68 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L-------------~~L~Ls~N~i~~~~~ 68 (843)
++|++|++++|++ +.+|.. |+++++|++|++++|.+.+..+..+..+++| ++|++++|.+++.+.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~-i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVE-AENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred ccchhhhcccCch-hhCChh-HhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 4689999999999 489975 6889999999999999987777777777754 888888888886543
Q ss_pred CCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhh
Q 003156 69 FASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLR 148 (843)
Q Consensus 69 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 148 (843)
. .++|++|++++|.+++ +|.. +++|++|++++|++++. +.. .++|++|++++|++++ +| .|.
T Consensus 89 ~--------~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~ 150 (454)
T 1jl5_A 89 L--------PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQ 150 (454)
T ss_dssp C--------CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCT
T ss_pred C--------cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccC
Confidence 1 2678888888888875 5532 36777888888777742 221 2577788888877775 45 477
Q ss_pred cccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceee
Q 003156 149 LLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEID 228 (843)
Q Consensus 149 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~ 228 (843)
.+++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+.++++|+.|++++|.+++ +|... .+|+.|+
T Consensus 151 ~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~ 221 (454)
T 1jl5_A 151 NSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIV 221 (454)
T ss_dssp TCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEE
T ss_pred CCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEE
Confidence 77778888888777774 45433 477777777777775 45 57777777777777777774 44332 2677777
Q ss_pred ccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEcc
Q 003156 229 LSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLR 308 (843)
Q Consensus 229 l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 308 (843)
+++|.+. .+|. +..+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|+++
T Consensus 222 l~~n~l~-~lp~-------~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls 285 (454)
T 1jl5_A 222 AGNNILE-ELPE-------LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVS 285 (454)
T ss_dssp CCSSCCS-SCCC-------CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CcCCcCC-cccc-------cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECc
Confidence 7777776 4442 2346677777777777763 4432 3567777777777665 2322 2456666666
Q ss_pred CCcccc--cCCccc-------------ccc-CCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCC
Q 003156 309 NNALYG--SIPQEV-------------CES-RSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLN 372 (843)
Q Consensus 309 ~n~l~~--~~~~~~-------------~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 372 (843)
+|++++ .+|..+ ..+ ++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .++
T Consensus 286 ~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~ 357 (454)
T 1jl5_A 286 ENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQ 357 (454)
T ss_dssp SSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCT
T ss_pred CCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhh
Confidence 666654 111111 112 356666666666664 4432 456666666666666 3554 356
Q ss_pred CCCEEEccCCcccc--cCCcchhcc-------------cccceEeecccccee--cCC
Q 003156 373 KLKILKLEFNELSG--EIPQELGKL-------------ASLLAVNVSYNRLIG--RLP 413 (843)
Q Consensus 373 ~L~~L~L~~N~l~~--~~p~~~~~l-------------~~L~~l~ls~N~l~~--~~p 413 (843)
+|++|+|++|++++ .+|..+.+| ++|+.|++++|++++ .+|
T Consensus 358 ~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 358 NLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp TCCEEECCSSCCSSCCCCCTTCCEEECCC-----------------------------
T ss_pred hccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccch
Confidence 66666666666666 566666666 566666666666665 444
No 187
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.8e-39 Score=352.85 Aligned_cols=263 Identities=24% Similarity=0.336 Sum_probs=205.1
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+.|+..+.||+|+||.||+|.+..+++.||+|.+.........+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 34567778999999999999999989999999999765433445678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999999999875 35899999999999999999999842 7999999999999999999999999999765432
Q ss_pred ccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhh----------
Q 003156 713 DKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEE---------- 782 (843)
Q Consensus 713 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~---------- 782 (843)
. .....||..|+|||++ .+..++.++|||||||++|||++|+.||......... .........
T Consensus 186 ~----~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3eqc_A 186 M----ANSFVGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE--LMFGCQVEGDAAETPPRPR 258 (360)
T ss_dssp C--------CCCCTTCCHHHH-TTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHH--HHHC---------------
T ss_pred c----ccCCCCCCCeECHHHH-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHhcccccccCCCCCCCcc
Confidence 1 2345789999999988 5567899999999999999999999999754322111 000000000
Q ss_pred --CCcc------------------cccCCCCCC-CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 783 --GNVL------------------DCVDPSMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 783 --~~~~------------------~~~d~~l~~-~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+... ......... ........+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 259 TPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 000000001 112345578899999999999999999999986
No 188
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.9e-39 Score=348.54 Aligned_cols=255 Identities=25% Similarity=0.352 Sum_probs=203.6
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
..+.|+..+.||+|+||.||+|.+..+|+.||+|.+..... ...+|++++.++ +||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 45667888899999999999999998999999999865432 245788888888 799999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC----CCcEEeeccCc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN----YNPRISDFGLA 706 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgl~ 706 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++.++ +.+||+|||++
T Consensus 95 ~E~~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 95 TELMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp ECCCCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 9999999999999864 4689999999999999999999999 99999999999998533 34999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
+....... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||....... ..+.... +..+...
T Consensus 168 ~~~~~~~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~-i~~~~~~ 241 (342)
T 2qr7_A 168 KQLRAENG--LLMTPCYTANFVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILAR-IGSGKFS 241 (342)
T ss_dssp EECBCTTC--CBCCSSCCSSCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHHH-HHHCCCC
T ss_pred ccCcCCCC--ceeccCCCccccCHHHh-cCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHHH-HccCCcc
Confidence 87653222 22455789999999988 44558899999999999999999999997542211 1122222 2222211
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 787 DCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 787 ~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
+ ...........+.+++.+|+..||++|||+.|++++-
T Consensus 242 --~---~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 242 --L---SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp --C---CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred --c---CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 0 0112344556788999999999999999999999864
No 189
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.9e-39 Score=341.45 Aligned_cols=262 Identities=18% Similarity=0.221 Sum_probs=201.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|.+..+++.||+|.+...... ...+.+.+|+.++++++||||+++++++..++..++||
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 3466777999999999999999888999999998654321 12367889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 114 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 114 RLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp ECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 999999999999875 4589999999999999999999998 999999999999999999999999999986654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.... ......|+..|+|||.+ .+..++.++||||||+++|||++|+.||..... . .....+.....
T Consensus 187 ~~~~-~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~----~~~~~~~~~~~------ 252 (309)
T 2h34_A 187 EKLT-QLGNTVGTLYYMAPERF-SESHATYRADIYALTCVLYECLTGSPPYQGDQL--S----VMGAHINQAIP------ 252 (309)
T ss_dssp -----------CCGGGCCGGGT-CC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--H----HHHHHHHSCCC------
T ss_pred cccc-cccccCCCcCccCHHHH-cCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--H----HHHHHhccCCC------
Confidence 2211 12345688999999988 556789999999999999999999999975321 1 11111111110
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHhccCCC
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRP-SMAEVVQILQVIKTPL 836 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RP-s~~evl~~L~~~~~~~ 836 (843)
.....+...+..+.+++.+||+.||++|| |++++++.|+......
T Consensus 253 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 253 RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 01112334455788999999999999999 9999999999876554
No 190
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.6e-39 Score=341.05 Aligned_cols=253 Identities=19% Similarity=0.284 Sum_probs=208.2
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
..|+..+.||+|+||.||+|.+..+++.||+|.+...... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 4566778999999999999999888999999998654322 23457889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 95 ELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp ECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 999999999998875 4689999999999999999999998 999999999999999999999999999987643
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... ......|+..|+|||.+ .+..++.++||||+|+++|||++|+.||....... ..... ....
T Consensus 168 ~~~--~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~-~~~~------- 231 (294)
T 2rku_A 168 DGE--RKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-----TYLRI-KKNE------- 231 (294)
T ss_dssp TTC--CBCCCCSCCSSCCHHHH-TTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHHHH-HTTC-------
T ss_pred Ccc--ccccccCCCCcCCcchh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHH-hhcc-------
Confidence 222 12345688999999988 55678999999999999999999999996543211 11111 1111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHh
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQV 831 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~ 831 (843)
...+......+.+++.+||+.||++|||++|++++-.-
T Consensus 232 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~ 269 (294)
T 2rku_A 232 --YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269 (294)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred --CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChhe
Confidence 11233445678899999999999999999999987443
No 191
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.2e-39 Score=342.38 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=205.7
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEc---------
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWT--------- 623 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--------- 623 (843)
...|+..+.||+|+||.||+|.+..+++.||+|.+.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 455777889999999999999998889999999986543 457789999999999999999998854
Q ss_pred -------CCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC
Q 003156 624 -------PQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY 696 (843)
Q Consensus 624 -------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 696 (843)
....++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 344789999999999999998652 35689999999999999999999998 999999999999999999
Q ss_pred CcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHH
Q 003156 697 NPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHV 776 (843)
Q Consensus 697 ~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~ 776 (843)
.+||+|||+++....... .....|+..|+|||.+ .+..++.++||||||+++|||++|..|+... ....
T Consensus 160 ~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~ 228 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFF 228 (284)
T ss_dssp EEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHH-HCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHH
T ss_pred CEEECcchhheecccccc---ccccCCcccccChhhh-ccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHH
Confidence 999999999987654322 2345688999999988 4557899999999999999999999887421 1111
Q ss_pred HHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCCC
Q 003156 777 RVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLP 837 (843)
Q Consensus 777 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~~ 837 (843)
.. ...+. .+......+.+++.+||+.||++|||+.|++++|+.+++...
T Consensus 229 ~~-~~~~~-----------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 229 TD-LRDGI-----------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HH-HHTTC-----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred HH-hhccc-----------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 11 11111 122234567899999999999999999999999999877643
No 192
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.5e-39 Score=375.27 Aligned_cols=251 Identities=25% Similarity=0.343 Sum_probs=200.9
Q ss_pred CeeccccceEEEEEEE--CCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEeCCC
Q 003156 560 AEVGEGVFGTVYKVSF--GTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPN 636 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~ 636 (843)
+.||+|+||.||+|.+ ...++.||||++...... ...+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999966 345688999998654322 235789999999999999999999999965 457899999999
Q ss_pred CCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccccc-
Q 003156 637 GSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKH- 715 (843)
Q Consensus 637 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~- 715 (843)
|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 454 g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 9999999864 4689999999999999999999998 9999999999999999999999999999876543322
Q ss_pred eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCC
Q 003156 716 VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMG 794 (843)
Q Consensus 716 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 794 (843)
.......+|+.|+|||++ ....++.++|||||||++|||++ |+.||...... . +...+..+.. .
T Consensus 527 ~~~~~~~~t~~y~APE~~-~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~----~~~~i~~~~~--------~ 591 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--E----VTAMLEKGER--------M 591 (635)
T ss_dssp --------CGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--H----HHHHHHTTCC--------C
T ss_pred ccccCCCCceeeeChhhh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H----HHHHHHcCCC--------C
Confidence 222334567889999988 56678999999999999999998 99999754321 1 1112222221 1
Q ss_pred CCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 795 DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 795 ~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
..+..++.++.++|..||+.||++|||++++++.|+.+.
T Consensus 592 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 592 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 234556678999999999999999999999999998764
No 193
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.2e-39 Score=355.99 Aligned_cols=268 Identities=22% Similarity=0.311 Sum_probs=194.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhcc-CCCccceeeEEEcCC--eeEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKAR-HPNLISLEGYYWTPQ--LKLL 629 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~--~~~l 629 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++++. ||||+++++++..++ ..++
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 456777899999999999999998999999999854321 223456789999999997 999999999997654 6799
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 89 v~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 999997 6899999763 588999999999999999999999 9999999999999999999999999999865
Q ss_pred cccc-------------------cceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchh
Q 003156 710 TRLD-------------------KHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVV 770 (843)
Q Consensus 710 ~~~~-------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~ 770 (843)
.... .........||+.|+|||++.....++.++||||+||++|||++|+.||.... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS-TMN 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-HHH
Confidence 3211 01112345789999999988665779999999999999999999999996532 222
Q ss_pred hHHHHHHHHHhhCCccc---------------------ccCCCCCC-------------CChhhHHHHHHHHHHccCCCC
Q 003156 771 ILSEHVRVLLEEGNVLD---------------------CVDPSMGD-------------YPEDEVLPVLKLALVCTCHIP 816 (843)
Q Consensus 771 ~l~~~~~~~~~~~~~~~---------------------~~d~~l~~-------------~~~~~~~~l~~l~~~c~~~~P 816 (843)
.+...... ........ ........ .......++.+++.+||+.||
T Consensus 239 ~~~~i~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 239 QLERIIGV-IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHHHH-HCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHh-cCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 22222211 10000000 00000000 011334578899999999999
Q ss_pred CCCCCHHHHHHH--HHhc
Q 003156 817 SSRPSMAEVVQI--LQVI 832 (843)
Q Consensus 817 ~~RPs~~evl~~--L~~~ 832 (843)
++|||++|++++ +..+
T Consensus 318 ~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIF 335 (388)
T ss_dssp GGSCCHHHHTTSTTTTTT
T ss_pred ccCCCHHHHhCCHHHHHh
Confidence 999999999988 4444
No 194
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.1e-39 Score=337.86 Aligned_cols=258 Identities=24% Similarity=0.354 Sum_probs=205.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-----cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-----QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
+.|+..+.||+|+||.||+|.+..+|+.||+|.+...... ...+.+.+|+.++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 4567788999999999999999888999999998654322 23578999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC----CcEEeecc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY----NPRISDFG 704 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 704 (843)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999874 4689999999999999999999998 999999999999999877 89999999
Q ss_pred CcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC
Q 003156 705 LARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN 784 (843)
Q Consensus 705 l~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 784 (843)
+++....... .....++..|+|||.+ ....++.++||||||+++|||++|+.||...... . ..... ....
T Consensus 158 ~~~~~~~~~~---~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~----~~~~~-~~~~ 227 (283)
T 3bhy_A 158 IAHKIEAGNE---FKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-E----TLTNI-SAVN 227 (283)
T ss_dssp TCEECC-----------CCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-H----HHHHH-HTTC
T ss_pred cceeccCCCc---ccccCCCcCccCccee-cCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-H----HHHHh-Hhcc
Confidence 9987643222 1345688999999988 5567899999999999999999999999653221 1 11111 1111
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhcc
Q 003156 785 VLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI--LQVIK 833 (843)
Q Consensus 785 ~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~--L~~~~ 833 (843)
.. .+ ..........+.+++.+||+.||++|||+.|++++ ++.+.
T Consensus 228 ~~--~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 228 YD--FD---EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp CC--CC---HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred cC--Cc---chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 00 00 00112334568899999999999999999999985 45543
No 195
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.8e-39 Score=347.29 Aligned_cols=258 Identities=22% Similarity=0.265 Sum_probs=199.1
Q ss_pred hhhhh-cCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEK-AAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~-~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+. .+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 44555 357999999999999998899999999986543 34567899999999995 7999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC---cEEeeccCccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN---PRISDFGLARL 708 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl~~~ 708 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 91 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 999999999999875 4589999999999999999999999 9999999999999997776 99999999976
Q ss_pred ccccccc-----eeccccccccccCCcccccC----cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhh--------
Q 003156 709 LTRLDKH-----VMSNRFQSALGYVAPELTCQ----SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVI-------- 771 (843)
Q Consensus 709 ~~~~~~~-----~~~~~~~g~~~y~aPE~~~~----~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~-------- 771 (843)
....... .......||..|+|||++.. ...++.++|||||||++|||++|+.||.........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 5422111 11123458999999998742 145789999999999999999999999764321100
Q ss_pred -HHHHHHHHHhhCCcccccCCCCCCCC----hhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 772 -LSEHVRVLLEEGNVLDCVDPSMGDYP----EDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 772 -l~~~~~~~~~~~~~~~~~d~~l~~~~----~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
....+...+..+.. .++ ......+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~~~~i~~~~~---------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 244 ACQNMLFESIQEGKY---------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHHCCC---------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hHHHHHHHHHhccCc---------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00111111222211 111 1234578899999999999999999999986
No 196
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.2e-39 Score=346.29 Aligned_cols=258 Identities=21% Similarity=0.271 Sum_probs=206.3
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CCCccceeeEEEc--CCeeE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HPNLISLEGYYWT--PQLKL 628 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~--~~~~~ 628 (843)
..+.|+..+.||+|+||.||+|.+..+++.||+|.+... ..+.+.+|+.++++++ ||||+++++++.+ ....+
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 345677888999999999999999889999999998533 3578999999999997 9999999999987 55689
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC-CcEEeeccCcc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY-NPRISDFGLAR 707 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~ 707 (843)
+||||+++++|.+++.. +++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 110 lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999998854 78899999999999999999998 999999999999999766 89999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHH--------
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVL-------- 779 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~-------- 779 (843)
....... .....++..|+|||++.....++.++||||+||++|||++|+.||.........+.......
T Consensus 180 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (330)
T 3nsz_A 180 FYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256 (330)
T ss_dssp ECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHH
T ss_pred EcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhH
Confidence 7654332 23457888999999985556789999999999999999999999976655444333322211
Q ss_pred HhhCCcccccCCC----------------C-CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 780 LEEGNVLDCVDPS----------------M-GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 780 ~~~~~~~~~~d~~----------------l-~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+..... ..++. . .........++.+++.+|++.||++|||++|++++
T Consensus 257 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 257 IDKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHTTC--CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHhcc--ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 010000 00000 0 01122346678999999999999999999999986
No 197
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=345.50 Aligned_cols=266 Identities=24% Similarity=0.379 Sum_probs=209.6
Q ss_pred hhhhhhcCeeccccceEEEEEEE----CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCC--e
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSF----GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ--L 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~ 626 (843)
...|+..+.||+|+||.||+|++ ..+++.||||++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 34567778999999999999995 4578999999986532 233567899999999999999999999987654 6
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 78999999999999999875 34589999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccc-eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCC----------chhhHHHH
Q 003156 707 RLLTRLDKH-VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGED----------NVVILSEH 775 (843)
Q Consensus 707 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~----------~~~~l~~~ 775 (843)
+........ .......++..|+|||.+ .+..++.++||||||+++|||+||..|+..... ........
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESL-TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhh-cCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 876543322 122344567789999987 455688999999999999999999999863210 00111111
Q ss_pred HHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 776 VRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 776 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
+......+.. ...+..++.++.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 272 ~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 272 LIELLKNNGR--------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHHTTCC--------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhhcCCC--------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1122222111 12244556789999999999999999999999999998754
No 198
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.7e-39 Score=351.14 Aligned_cols=256 Identities=21% Similarity=0.310 Sum_probs=202.7
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHH-HHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRV-LGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
.|+..+.||+|+||.||+|.+..+|+.||||++...........+..|..+ ++.++||||+++++++.+++..++||||
T Consensus 52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 131 (340)
T 3an0_A 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131 (340)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECC
T ss_pred heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHH
Confidence 456677899999999999999889999999998655433334556666665 7778999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
+++ +|.+++.........+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 208 (340)
T 3an0_A 132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV 208 (340)
T ss_dssp CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH
T ss_pred hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccccc
Confidence 975 999998764333567999999999999999999999743 89999999999999999999999999998764322
Q ss_pred cceeccccccccccCCccccc---CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 714 KHVMSNRFQSALGYVAPELTC---QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 714 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
. .....||..|+|||++. ....++.++|||||||++|||++|+.||.........+. .......
T Consensus 209 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~------ 275 (340)
T 3an0_A 209 A---KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK----QVVEEPS------ 275 (340)
T ss_dssp H---HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH----HHHHSCC------
T ss_pred c---cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHH----HHhcCCC------
Confidence 1 13347899999999863 334688999999999999999999999975433222222 1222111
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+. ........++.+++.+||+.||++|||+.|++++
T Consensus 276 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 PQ--LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CC--CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CC--CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11 1123345678999999999999999999999985
No 199
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.2e-39 Score=347.52 Aligned_cols=265 Identities=22% Similarity=0.232 Sum_probs=197.0
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
.+.|+..+.||+|+||.||+|.+..+++.||||++...... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 34577788999999999999999889999999998654322 23456789999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc-----CCCCcEEeeccCc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD-----DNYNPRISDFGLA 706 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-----~~~~~kl~Dfgl~ 706 (843)
||++ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 113 e~~~-~~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp ECCS-EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred ecCC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 9997 5999999875 4589999999999999999999998 999999999999994 4556999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC--
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN-- 784 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~-- 784 (843)
+....... ......+|..|+|||++.....++.++|||||||++|||++|+.||..... ...+............
T Consensus 185 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 185 RAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-IDQLFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTT
T ss_pred cccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-HHHHHHHHHHhCCCchhh
Confidence 87643222 123456789999999985556689999999999999999999999965422 2222222221100000
Q ss_pred ccc-----ccCCCCCC---------CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 785 VLD-----CVDPSMGD---------YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 785 ~~~-----~~d~~l~~---------~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
... ........ .+.....++.+++.+|++.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000 00000000 011244678899999999999999999999875
No 200
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=5.2e-38 Score=352.92 Aligned_cols=342 Identities=19% Similarity=0.190 Sum_probs=223.2
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
++|++|+|++|+|+ .+| .|..+++|++|+|++|+|++++ |..+++|++|+|++|++++. .+..+++|
T Consensus 42 ~~L~~L~Ls~n~l~-~~~--~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-------~~~~l~~L 108 (457)
T 3bz5_A 42 ATLTSLDCHNSSIT-DMT--GIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-------DVTPLTKL 108 (457)
T ss_dssp TTCCEEECCSSCCC-CCT--TGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-------CCTTCTTC
T ss_pred CCCCEEEccCCCcc-cCh--hhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-------ecCCCCcC
Confidence 56777777777777 455 3667777777777777777663 66777777777777777653 15567777
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecC
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNN 161 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 161 (843)
++|++++|++++ ++ +..+++|++|++++|++++. .++.+++|++|++++|...+.. .+..+++|+.|++++|
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 777777777765 33 67777777777777777753 2667777777777777443333 4666777777777777
Q ss_pred cccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcceecCCC
Q 003156 162 TLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFMGSIPP 240 (843)
Q Consensus 162 ~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p~ 240 (843)
++++ +| ++.+++|+.|++++|++++. .+..+++|+.|++++|++++ +| +... +|+.|++++|++.+..+
T Consensus 181 ~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~- 250 (457)
T 3bz5_A 181 KITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV- 250 (457)
T ss_dssp CCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-
T ss_pred ccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-
Confidence 7775 34 66777777777777777753 36677777777777777774 44 2222 56677777776664321
Q ss_pred CCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCc--
Q 003156 241 GSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQ-- 318 (843)
Q Consensus 241 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-- 318 (843)
..+++|+.|++++| +|+.|++++|.+.+..| ++.+++|+.|++++|...+.+|.
T Consensus 251 --------~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~ 306 (457)
T 3bz5_A 251 --------STLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQA 306 (457)
T ss_dssp --------TTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTT
T ss_pred --------HHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCC
Confidence 12344444444333 22333444444333222 23445555555555544433332
Q ss_pred ------cccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcch
Q 003156 319 ------EVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQEL 392 (843)
Q Consensus 319 ------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 392 (843)
.+..+++|+.|++++|++++. + ++++++|+.|++++|+|++ ++.|..|++++|+++|.
T Consensus 307 ~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~----- 370 (457)
T 3bz5_A 307 AGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE----- 370 (457)
T ss_dssp CCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----
T ss_pred CcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----
Confidence 134446788888888888864 3 7888888888888888875 24566677888888876
Q ss_pred hcccccceEeeccccceecCCC
Q 003156 393 GKLASLLAVNVSYNRLIGRLPV 414 (843)
Q Consensus 393 ~~l~~L~~l~ls~N~l~~~~p~ 414 (843)
.++..|..+++++|+++|.+|.
T Consensus 371 ~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 371 GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp EEEEECCCBCCBTTBEEEECCT
T ss_pred ceeeecCccccccCcEEEEcCh
Confidence 3567788899999999999984
No 201
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=350.14 Aligned_cols=265 Identities=17% Similarity=0.178 Sum_probs=207.8
Q ss_pred hhhhhcCeeccccceEEEEEEECC--------CCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccc---------
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGT--------QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLIS--------- 616 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 616 (843)
+.|+..+.||+|+||.||+|.+.. +++.||+|.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 457778899999999999999976 4789999998643 36889999999999999988
Q ss_pred ------eeeEEEc-CCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCC
Q 003156 617 ------LEGYYWT-PQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSN 689 (843)
Q Consensus 617 ------l~g~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 689 (843)
+++++.. ....++||||+ +|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 6777776 67889999999 999999998741 35699999999999999999999999 99999999999
Q ss_pred EEEcCCC--CcEEeeccCcccccccccce-----eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCC
Q 003156 690 ILLDDNY--NPRISDFGLARLLTRLDKHV-----MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPV 762 (843)
Q Consensus 690 ill~~~~--~~kl~Dfgl~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~ 762 (843)
|+++.++ .+||+|||+++.+....... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLH-KGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHH-ccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 9999988 99999999998765433211 11344789999999988 5557899999999999999999999999
Q ss_pred cCCCCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 763 EYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 763 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
..................... ....+... ........+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 269 TNCLPNTEDIMKQKQKFVDKP--GPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp GGGTTCHHHHHHHHHHHHHSC--CCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHhccCCh--hhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 865433333333332222211 11111110 1123346789999999999999999999999999887543
No 202
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=349.60 Aligned_cols=254 Identities=15% Similarity=0.165 Sum_probs=204.9
Q ss_pred hhhhhcCeeccccceEEEEEE-----ECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc---CCCccceeeEEEcCC
Q 003156 554 TLLEKAAEVGEGVFGTVYKVS-----FGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR---HPNLISLEGYYWTPQ 625 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~ 625 (843)
+.|+..+.||+|+||.||+|. ...+++.||||++... ...++..|+++++.++ |+||+++++++...+
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 456677899999999999994 4557899999998543 3567888999998887 999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCC-CCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC----------
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLP-STPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---------- 694 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---------- 694 (843)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +||||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999986322 245699999999999999999999998 9999999999999998
Q ss_pred -CCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHH
Q 003156 695 -NYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILS 773 (843)
Q Consensus 695 -~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~ 773 (843)
++.+||+|||+++.+.............||.+|+|||++ .+..++.++|||||||++|||+||+.||........
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--- 293 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML-SNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--- 293 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHH-TTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHh-cCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---
Confidence 899999999999866543333344566799999999988 555689999999999999999999999964322110
Q ss_pred HHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHhccC
Q 003156 774 EHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSR-PSMAEVVQILQVIKT 834 (843)
Q Consensus 774 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~R-Ps~~evl~~L~~~~~ 834 (843)
.+.......+ ....+.+++..|+..+|.+| |++.++.+.|+.+..
T Consensus 294 --------------~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 294 --------------KPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp --------------EECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred --------------eechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 1111122222 24467789999999999999 678888888877543
No 203
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.6e-39 Score=336.74 Aligned_cols=250 Identities=24% Similarity=0.331 Sum_probs=198.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC--cccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD--IIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|.+..+|+.||+|.+.... .....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 34667779999999999999998889999999986542 2234568899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 91 EYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp ECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred eccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 999999999999875 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
... .....++..|+|||.+......+.++||||||+++|||++|+.||..... ... .+. +..+.
T Consensus 164 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~---~~~-~~~~~------- 227 (276)
T 2h6d_A 164 GEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTL---FKK-IRGGV------- 227 (276)
T ss_dssp ----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH---HHH-HHHCC-------
T ss_pred Ccc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHH---HHH-hhcCc-------
Confidence 221 13456889999999985444446899999999999999999999965321 111 111 11111
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...+......+.+++.+||+.||++|||+.|++++
T Consensus 228 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 --FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11233445678899999999999999999999986
No 204
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1e-38 Score=337.18 Aligned_cols=248 Identities=23% Similarity=0.376 Sum_probs=206.2
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|....+++.||+|.+..... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 456777899999999999999988899999999865421 234567899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 999999999999875 3589999999999999999999998 999999999999999999999999999976543
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
.. .....|+..|+|||.+ .+..++.++||||||+++|||++|+.||...... ........ . +.
T Consensus 167 ~~----~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~-~------~~ 229 (284)
T 2vgo_A 167 LR----RRTMCGTLDYLPPEMI-EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHRRIVN-V------DL 229 (284)
T ss_dssp SC----BCCCCSCGGGCCHHHH-TTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHT-T------CC
T ss_pred cc----cccccCCCCcCCHHHh-ccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHHHHhc-c------cc
Confidence 22 2345788999999988 5567899999999999999999999999754221 11111111 1 11
Q ss_pred CCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 792 SMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 792 ~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.++......+.+++.+|++.||++|||++|++++
T Consensus 230 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 ---KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ---CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ---CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1234455678899999999999999999999985
No 205
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=344.28 Aligned_cols=267 Identities=25% Similarity=0.299 Sum_probs=202.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc----cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII----QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
..|+..+.||+|+||.||+|.+..+|+.||||++...... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 4577788999999999999999888999999998643221 123468899999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 90 v~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999975 898888764 35688999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhC--Cccc
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEG--NVLD 787 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~ 787 (843)
..... ......+|..|+|||++.....++.++|||||||++|||++|..||.... ....+........... ...+
T Consensus 163 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 163 GSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS-DLDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCTTTSSS
T ss_pred cCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHcCCCChhhhhh
Confidence 43222 12345789999999988555568999999999999999999999986542 2222222222110000 0000
Q ss_pred -ccCC------CCCCC-----ChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003156 788 -CVDP------SMGDY-----PEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 830 (843)
Q Consensus 788 -~~d~------~l~~~-----~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~ 830 (843)
+-.+ ..+.. ......++.+++.+|++.||++|||+.|++++-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 0000 00011 1334567899999999999999999999998743
No 206
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3e-39 Score=352.74 Aligned_cols=246 Identities=22% Similarity=0.276 Sum_probs=193.7
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHH-HHhccCCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRV-LGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
+.|+..+.||+|+||.||+|++..+++.||+|++...... ...+.+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 4567788999999999999999989999999999765432 223456667766 5678999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 9999999999999875 4588999999999999999999998 99999999999999999999999999998643
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
... .......||+.|+|||++ .+..++.++|||||||++|||++|+.||..... . ...+..... ..
T Consensus 191 ~~~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~----~~~~~i~~~-~~----- 256 (373)
T 2r5t_A 191 EHN--STTSTFCGTPEYLAPEVL-HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-A----EMYDNILNK-PL----- 256 (373)
T ss_dssp CCC--CCCCSBSCCCCCCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-H----HHHHHHHHS-CC-----
T ss_pred cCC--CccccccCCccccCHHHh-CCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-H----HHHHHHHhc-cc-----
Confidence 221 223556899999999988 556789999999999999999999999965322 1 111122211 10
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAE 824 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~e 824 (843)
.++......+.+++.+|++.||++||++.+
T Consensus 257 ----~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 257 ----QLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ----CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ----CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 123344567889999999999999999853
No 207
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=8.3e-39 Score=339.00 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=200.4
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEc----CCeeEE
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWT----PQLKLL 629 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~l 629 (843)
.|+..+.||+|+||.||+|.+..++..||+|.+...... ...+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 355666899999999999999989999999998654322 234578899999999999999999999865 345789
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCC--eeecCCCCCCEEEc-CCCCcEEeeccCc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPP--IIHYNLKPSNILLD-DNYNPRISDFGLA 706 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfgl~ 706 (843)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++ +++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 99999999999999875 4589999999999999999999998 6 99999999999998 8899999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
+...... .....||..|+|||++. ..++.++||||+||++|||++|+.||.......... .. ...+...
T Consensus 180 ~~~~~~~----~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~-~~~~~~~ 248 (290)
T 1t4h_A 180 TLKRASF----AKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY----RR-VTSGVKP 248 (290)
T ss_dssp GGCCTTS----BEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH----HH-HTTTCCC
T ss_pred ccccccc----cccccCCcCcCCHHHHh--ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH----HH-HhccCCc
Confidence 7544322 13456899999999873 358999999999999999999999997543322211 11 1111110
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 787 DCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 787 ~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...+.....++.+++.+||+.||++|||++|++++
T Consensus 249 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 -------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01223334578899999999999999999999875
No 208
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.5e-39 Score=359.29 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=194.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-------cChHHHHHHHHHHHhccCCCccceeeEEEcCC
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-------QYPEDFEREVRVLGKARHPNLISLEGYYWTPQ 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 625 (843)
.+.|+..+.||+|+||.||+|.+..+++.||||.+...... .....+.+|+.++++++||||+++++++.. +
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence 45577788999999999999999989999999998654311 112357899999999999999999999854 4
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC---CCcEEee
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN---YNPRISD 702 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~D 702 (843)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred ceEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 578999999999998888754 4689999999999999999999998 99999999999999754 4599999
Q ss_pred ccCcccccccccceeccccccccccCCcccccC--cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH
Q 003156 703 FGLARLLTRLDKHVMSNRFQSALGYVAPELTCQ--SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 703 fgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
||+++...... ......||+.|+|||++.. ...++.++|||||||++|||++|+.||........ +... +
T Consensus 286 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~----i 357 (419)
T 3i6u_A 286 FGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQ----I 357 (419)
T ss_dssp SSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHH----H
T ss_pred cccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHH----H
Confidence 99998765322 2245678999999998743 35678899999999999999999999975433221 1111 1
Q ss_pred hhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 781 EEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 781 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+... ..+.........+.+++.+||+.||++|||++|++++
T Consensus 358 ~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 TSGKYN-----FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HTTCCC-----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcCCCC-----CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 111110 0000112345678899999999999999999999986
No 209
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.7e-39 Score=347.40 Aligned_cols=252 Identities=19% Similarity=0.296 Sum_probs=207.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
...|+..+.||+|+||.||+|.+..+++.||+|.+...... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 34567778999999999999999988999999998654322 2346788999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 9999999999998875 4689999999999999999999998 99999999999999999999999999998764
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
.... ......|+..|+|||++ .+..++.++|||||||++|||++|+.||...... ........ ...
T Consensus 193 ~~~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~-~~~----- 258 (335)
T 2owb_A 193 YDGE--RKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLRIKK-NEY----- 258 (335)
T ss_dssp STTC--CBCCCCSCCSSCCHHHH-HTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHH-TCC-----
T ss_pred cCcc--cccccCCCccccCHHHh-ccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-----HHHHHHhc-CCC-----
Confidence 3222 12445789999999988 4556899999999999999999999999654221 11111111 110
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
..+......+.+++.+||+.||++|||++|++++-
T Consensus 259 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 259 ----SIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 12334455788999999999999999999999864
No 210
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.1e-39 Score=346.24 Aligned_cols=268 Identities=25% Similarity=0.325 Sum_probs=204.8
Q ss_pred ChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-ChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 551 DPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-YPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 551 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
..-+.|+..+.||+|+||.||+|.+..+|+.||+|++....... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 34566788889999999999999998889999999986554322 23557899999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 102 v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 174 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL 174 (331)
T ss_dssp EEECCSEEHHHHHHHST----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecCCcchHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceee
Confidence 99999999998887653 4589999999999999999999999 9999999999999999999999999999866
Q ss_pred cccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHH----------H
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRV----------L 779 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~----------~ 779 (843)
..... ......|+..|+|||++.....++.++||||+||++|||++|+.||...... ..+...... .
T Consensus 175 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 175 AAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHHH
T ss_pred cCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhhhH
Confidence 43222 1234568899999998855557899999999999999999999999754322 112111110 1
Q ss_pred HhhCC-cccccCCCCCC------CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 780 LEEGN-VLDCVDPSMGD------YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 780 ~~~~~-~~~~~d~~l~~------~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..... ......+.... ........+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11111 11111111111 112345678999999999999999999999875
No 211
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.1e-39 Score=346.82 Aligned_cols=272 Identities=23% Similarity=0.279 Sum_probs=200.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHH--HHhccCCCccceeeEEEc-----CCe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRV--LGKARHPNLISLEGYYWT-----PQL 626 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~-----~~~ 626 (843)
+.|+..+.||+|+||.||+|++ +++.||||++.... ...+..|.++ +..++||||+++++++.. ...
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 4466777999999999999988 68999999986433 3445555555 445799999999986642 225
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcC------CCCeeecCCCCCCEEEcCCCCcEE
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSF------RPPIIHYNLKPSNILLDDNYNPRI 700 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~kl 700 (843)
.++||||+++|+|.+++... ..++..++.++.|+++||+|||+.+ .++|+||||||+||+++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 68999999999999999764 3588999999999999999999763 338999999999999999999999
Q ss_pred eeccCccccccccc------ceeccccccccccCCcccccCc------CCCCCchhHHHHHHHHHHHHhCCCCCcCCCCc
Q 003156 701 SDFGLARLLTRLDK------HVMSNRFQSALGYVAPELTCQS------LRVNEKCDIYGFGVLILELVTGRRPVEYGEDN 768 (843)
Q Consensus 701 ~Dfgl~~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~~------~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~ 768 (843)
+|||+++.+..... ........||..|+|||++... ..++.++|||||||++|||++|+.||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987653221 1112345689999999988432 34667899999999999999998887554221
Q ss_pred hhh------------HHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 769 VVI------------LSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 769 ~~~------------l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
... .................+.... ........++.+++.+||+.||++|||++|+++.|+.+..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC-CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc-ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 110 0011111111111111111111 123446678999999999999999999999999999987654
Q ss_pred C
Q 003156 837 P 837 (843)
Q Consensus 837 ~ 837 (843)
.
T Consensus 321 ~ 321 (336)
T 3g2f_A 321 E 321 (336)
T ss_dssp C
T ss_pred H
Confidence 3
No 212
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-39 Score=349.31 Aligned_cols=257 Identities=26% Similarity=0.353 Sum_probs=205.9
Q ss_pred hhhhhcCeeccccceEEEEEEEC---CCCeEEEEEEeecCCc---ccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFG---TQGRMLAVKKLVTSDI---IQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQL 626 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 626 (843)
+.|+..+.||+|+||.||+|+.. .+++.||||++..... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 55777889999999999999984 4789999999854321 23345677899999999 69999999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 99999999999999999875 3589999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccceeccccccccccCCcccccCc-CCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCc
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQS-LRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNV 785 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 785 (843)
+.+...... ......||+.|+|||++... ..++.++|||||||++|||++|+.||....... ......+.....
T Consensus 207 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~--- 281 (355)
T 1vzo_A 207 KEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKS--- 281 (355)
T ss_dssp EECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHHC---
T ss_pred eecccCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhcc---
Confidence 866432222 22446789999999988542 357899999999999999999999997543221 112222222211
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 003156 786 LDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRP-----SMAEVVQIL 829 (843)
Q Consensus 786 ~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RP-----s~~evl~~L 829 (843)
...++......+.+++.+||..||++|| |++|++++.
T Consensus 282 -------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 -------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1123445556788999999999999999 999999875
No 213
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=9.7e-39 Score=340.67 Aligned_cols=259 Identities=23% Similarity=0.354 Sum_probs=205.7
Q ss_pred ccChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeE
Q 003156 549 SIDPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKL 628 (843)
Q Consensus 549 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 628 (843)
..++.+.|+..+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++++++||||+++++++..++..+
T Consensus 14 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (302)
T 2j7t_A 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92 (302)
T ss_dssp SSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred ccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence 3456778888999999999999999998889999999985443 345678999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
+||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 93 lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp EEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred EEEEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 999999999999998864 34589999999999999999999998 999999999999999999999999999864
Q ss_pred ccccccceeccccccccccCCccccc----CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTC----QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN 784 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~ 784 (843)
..... .......|+..|+|||++. ....++.++||||||+++|||++|+.||....... .........
T Consensus 167 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~- 238 (302)
T 2j7t_A 167 NLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----VLLKIAKSD- 238 (302)
T ss_dssp HHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSC-
T ss_pred ccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-----HHHHHhccC-
Confidence 33211 1113456889999999873 34568899999999999999999999997542211 111111111
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 785 VLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 785 ~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
. .....+......+.+++.+||+.||++|||+.|++++
T Consensus 239 ~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 239 P------PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp C------CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred C------cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 0111234455678999999999999999999999875
No 214
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=335.71 Aligned_cols=252 Identities=22% Similarity=0.342 Sum_probs=201.3
Q ss_pred hcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEeCCCC
Q 003156 558 KAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNG 637 (843)
Q Consensus 558 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g 637 (843)
....||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 104 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG 104 (295)
T ss_dssp SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence 3448999999999999998899999999986543 334577999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC-CCCcEEeeccCcccccccccce
Q 003156 638 SLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD-NYNPRISDFGLARLLTRLDKHV 716 (843)
Q Consensus 638 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~~~~~~ 716 (843)
+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 105 ~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-- 178 (295)
T 2clq_A 105 SLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-- 178 (295)
T ss_dssp EHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred CHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC--
Confidence 9999998752 234567888999999999999999998 9999999999999997 89999999999987643221
Q ss_pred eccccccccccCCcccccCc-CCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCC
Q 003156 717 MSNRFQSALGYVAPELTCQS-LRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGD 795 (843)
Q Consensus 717 ~~~~~~g~~~y~aPE~~~~~-~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 795 (843)
......|+..|+|||++... ..++.++||||||+++|||++|+.||............ .... . . ...
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~-~-----~---~~~ 246 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMF-K-----V---HPE 246 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---HHHH-C-----C---CCC
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---hccc-c-----c---ccc
Confidence 12445788999999987433 23789999999999999999999999654322211111 1000 0 1 112
Q ss_pred CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 796 YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 796 ~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.+.....++.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 344556678899999999999999999999876
No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.1e-39 Score=348.29 Aligned_cols=266 Identities=21% Similarity=0.300 Sum_probs=187.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
+.|+..+.||+|+||.||+|.+..+++.||||++.........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 34666779999999999999998789999999986554444556788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC----CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 634 APNGSLQAKLHERL----PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 634 ~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 99999999997521 1235689999999999999999999998 9999999999999999999999999999766
Q ss_pred ccccc---ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 710 TRLDK---HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 710 ~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
..... ........||..|+|||++.....++.++||||||+++|||++|+.||......... . ...... ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~----~~~~~~-~~ 245 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-M----LTLQND-PP 245 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH-H----HHHTSS-CC
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH-H----HHhccC-CC
Confidence 43221 111234568899999998754456899999999999999999999999764332211 1 111111 10
Q ss_pred cccC-CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 787 DCVD-PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 787 ~~~d-~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.... ............++.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp CTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0000 00011233445678899999999999999999999985
No 216
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=340.06 Aligned_cols=255 Identities=24% Similarity=0.395 Sum_probs=202.9
Q ss_pred cChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 550 IDPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 550 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
..+.+.|+..+.||+|+||.||+|.+..+|+.||+|.+.... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 345566778889999999999999998889999999986543 34678999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 102 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 99999999999999754 35689999999999999999999998 9999999999999999999999999999866
Q ss_pred cccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccccc
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCV 789 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 789 (843)
..... ......|+..|+|||.+ .+..++.++||||||+++|||++|+.||....... .... ......
T Consensus 176 ~~~~~--~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~-~~~~~~---- 242 (314)
T 3com_A 176 TDTMA--KRNTVIGTPFWMAPEVI-QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-----AIFM-IPTNPP---- 242 (314)
T ss_dssp BTTBS--CBCCCCSCGGGCCHHHH-SSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHH-HHHSCC----
T ss_pred hhhcc--ccCccCCCCCccChhhc-CCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-----HHHH-HhcCCC----
Confidence 53221 12445688999999988 55578999999999999999999999997542211 1111 111110
Q ss_pred CCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 790 DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 790 d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+. ...+......+.+++.+||+.||++|||+.|++++
T Consensus 243 -~~-~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 243 -PT-FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp -CC-CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -cc-cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11 11234445678999999999999999999999875
No 217
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.3e-39 Score=355.09 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=201.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC---------
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP--------- 624 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--------- 624 (843)
..|+..+.||+|+||.||+|.+..+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 456778899999999999999988999999999865432 234799999999999999999998543
Q ss_pred -----------------------------CeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhc
Q 003156 625 -----------------------------QLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHS 675 (843)
Q Consensus 625 -----------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~ 675 (843)
...++||||++ |+|.+.+.........+++..+..++.|+++||+|||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 23789999998 588888876433456799999999999999999999998
Q ss_pred CCCCeeecCCCCCCEEEc-CCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHH
Q 003156 676 FRPPIIHYNLKPSNILLD-DNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILE 754 (843)
Q Consensus 676 ~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~e 754 (843)
+|+||||||+||+++ .++.+||+|||+++........ ....+|..|+|||++.....++.++||||+||++||
T Consensus 161 ---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 161 ---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS---VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp ---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC---CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred ---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC---cCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 999999999999998 6889999999999876543322 345678999999988566668999999999999999
Q ss_pred HHhCCCCCcCCCCchhhHHHHHHHHH--------hh-CCcccccCCCCCC------CChhhHHHHHHHHHHccCCCCCCC
Q 003156 755 LVTGRRPVEYGEDNVVILSEHVRVLL--------EE-GNVLDCVDPSMGD------YPEDEVLPVLKLALVCTCHIPSSR 819 (843)
Q Consensus 755 lltg~~p~~~~~~~~~~l~~~~~~~~--------~~-~~~~~~~d~~l~~------~~~~~~~~l~~l~~~c~~~~P~~R 819 (843)
|++|+.||.... ....+...++... .. ....+..-+.... ++...+..+.+++.+||+.||++|
T Consensus 235 ll~g~~pf~~~~-~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 235 LILGKPLFSGET-SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HHHSSCSSCCSS-HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred HHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 999999997532 2223333222110 00 0001110111111 344456678999999999999999
Q ss_pred CCHHHHHHH
Q 003156 820 PSMAEVVQI 828 (843)
Q Consensus 820 Ps~~evl~~ 828 (843)
||+.|++++
T Consensus 314 ~t~~e~l~h 322 (383)
T 3eb0_A 314 INPYEAMAH 322 (383)
T ss_dssp CCHHHHHTS
T ss_pred CCHHHHhcC
Confidence 999999875
No 218
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.6e-39 Score=338.07 Aligned_cols=252 Identities=25% Similarity=0.379 Sum_probs=199.0
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC-CeeEEEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP-QLKLLVS 631 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~~lV~ 631 (843)
.+.|+..+.||+|+||.||+|.+ .|+.||||.+.... ..+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 34577788999999999999998 58899999986432 457899999999999999999999998655 4689999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 9999999999998651 22378899999999999999999998 999999999999999999999999999976543
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
.. ....++..|+|||.+ .+..++.++||||||+++|||+| |+.||....... .... +..+.
T Consensus 170 ~~-----~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~----~~~~~------ 231 (278)
T 1byg_A 170 TQ-----DTGKLPVKWTAPEAL-REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPR----VEKGY------ 231 (278)
T ss_dssp -----------CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHH----HTTTC------
T ss_pred cc-----cCCCccccccCHHHh-CCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH----HhcCC------
Confidence 21 233567889999987 55678999999999999999998 999997543221 1111 11111
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
....+...+..+.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 232 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 232 --KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 112344556778999999999999999999999999998854
No 219
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.7e-39 Score=360.42 Aligned_cols=261 Identities=23% Similarity=0.275 Sum_probs=194.9
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCC------
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ------ 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------ 625 (843)
.+.|+..+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++.++||||+++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 3557778899999999999999998999999999965421 223467889999999999999999999997553
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccC
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGL 705 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 705 (843)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 56999999976 46666653 388999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhh---
Q 003156 706 ARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEE--- 782 (843)
Q Consensus 706 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~--- 782 (843)
++...... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||.... ....+...++..-..
T Consensus 211 a~~~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~-~~~~~~~i~~~lg~p~~~ 285 (464)
T 3ttj_A 211 ARTAGTSF---MMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPE 285 (464)
T ss_dssp C-----CC---CC----CCCTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCSCCHH
T ss_pred eeecCCCc---ccCCCcccccccCHHHH-cCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCCHH
Confidence 98765322 22456789999999998 45579999999999999999999999996532 222222222211000
Q ss_pred --CCc----cccc--CCCCCC------CC-----------hhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 783 --GNV----LDCV--DPSMGD------YP-----------EDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 783 --~~~----~~~~--d~~l~~------~~-----------~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
... ...+ .+.... ++ .....++.+++.+|++.||++|||++|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0000 000000 00 1125578899999999999999999999987
No 220
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.3e-38 Score=343.26 Aligned_cols=256 Identities=21% Similarity=0.292 Sum_probs=202.7
Q ss_pred hhhhhhc-CeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhcc-CCCccceeeEEEcCCeeEE
Q 003156 553 ETLLEKA-AEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKAR-HPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 553 ~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~l 629 (843)
.++|... +.||+|+||.||+|....+++.||+|.+..... ......+.+|+.++++++ ||||+++++++.+.+..++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 3445554 689999999999999998999999999865432 234578899999999994 6999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC---CCCcEEeeccCc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---NYNPRISDFGLA 706 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~ 706 (843)
||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a 181 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181 (327)
T ss_dssp EEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred EEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence 99999999999998654 235689999999999999999999998 9999999999999997 789999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
+....... .....||+.|+|||++ ....++.++|||||||++|||++|+.||....... .. ... .....
T Consensus 182 ~~~~~~~~---~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~----~~i-~~~~~- 250 (327)
T 3lm5_A 182 RKIGHACE---LREIMGTPEYLAPEIL-NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TY----LNI-SQVNV- 250 (327)
T ss_dssp EEC------------CCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HH----HHH-HHTCC-
T ss_pred cccCCccc---cccccCCcCccCCeee-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HH----HHH-Hhccc-
Confidence 87653222 2345789999999988 56678999999999999999999999996543211 11 111 11110
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 787 DCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 787 ~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.............+.+++.+||+.||++|||++|++++
T Consensus 251 ----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 ----DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ----CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00111233455678899999999999999999999986
No 221
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=349.28 Aligned_cols=264 Identities=22% Similarity=0.319 Sum_probs=200.6
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCC------
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ------ 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------ 625 (843)
...|+..+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.++++++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 3457778899999999999999988999999999854322 223457889999999999999999999997653
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccC
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGL 705 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 705 (843)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 88999999863 588999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHH------
Q 003156 706 ARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVL------ 779 (843)
Q Consensus 706 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~------ 779 (843)
++..... .....+|..|+|||++.....++.++||||+||++|||++|+.||.... ....+....+..
T Consensus 175 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~l~~i~~~~g~~~~~ 248 (367)
T 1cm8_A 175 ARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD-HLDQLKEIMKVTGTPPAE 248 (367)
T ss_dssp CEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCHH
T ss_pred ccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCCHH
Confidence 9865431 1345788999999988665679999999999999999999999997532 222222221110
Q ss_pred -------------HhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhcc
Q 003156 780 -------------LEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI--LQVIK 833 (843)
Q Consensus 780 -------------~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~--L~~~~ 833 (843)
...- ..................+.+++.+|++.||++|||++|++++ ++.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 249 FVQRLQSDEAKNYMKGL--PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHTCSCHHHHHHHHHS--CCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHhhhHHHHHHHHhC--CCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0000 0000111112233445678899999999999999999999996 44443
No 222
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.1e-38 Score=336.20 Aligned_cols=271 Identities=24% Similarity=0.318 Sum_probs=207.6
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEEe
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
.|+..+.||+|+||.||+|....+|+.||+|.+..... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (299)
T 2r3i_A 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence 35667789999999999999988899999999865432 23346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLD 713 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 713 (843)
++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 84 LH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp CS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred cc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 97 69999998752 34588999999999999999999999 99999999999999999999999999998664322
Q ss_pred cceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc-----
Q 003156 714 KHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC----- 788 (843)
Q Consensus 714 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~----- 788 (843)
. ......+|..|+|||.+.....++.++|||||||++|||++|+.||..... ...+....+.. +...+.
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~---~~~~~~~~~~~ 231 (299)
T 2r3i_A 158 R--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTL---GTPDEVVWPGV 231 (299)
T ss_dssp B--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHH---CCCCTTTSTTG
T ss_pred c--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHh---CCCchhhhhHh
Confidence 1 123446789999999885555589999999999999999999999975432 22222222111 111000
Q ss_pred -----cCCCCCC--------CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhccCCCC
Q 003156 789 -----VDPSMGD--------YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI--LQVIKTPLP 837 (843)
Q Consensus 789 -----~d~~l~~--------~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~--L~~~~~~~~ 837 (843)
..+.... .......++.+++.+|++.||++|||+.|++++ ++.+..+.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~~~~ 295 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCCCC
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCCCCC
Confidence 0111111 012344678899999999999999999999985 555555443
No 223
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.4e-38 Score=336.74 Aligned_cols=254 Identities=23% Similarity=0.313 Sum_probs=205.0
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
..+.|+..+.||+|+||.||+|+...+|+.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 34567778899999999999999988999999999975432 23457889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE---cCCCCcEEeeccCccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL---DDNYNPRISDFGLARL 708 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~ 708 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 86 QLVSGGELFDRILER----GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp CCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EcCCCccHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 999999999999875 3589999999999999999999998 99999999999999 7889999999999975
Q ss_pred ccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 709 LTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 709 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
..... .....|+..|+|||.+ .+..++.++||||+||++|||++|+.||..... .. .... +..+... .
T Consensus 159 ~~~~~----~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~---~~~~-i~~~~~~-~ 226 (304)
T 2jam_A 159 EQNGI----MSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SK---LFEK-IKEGYYE-F 226 (304)
T ss_dssp CCCBT----THHHHSCCCBCCTTTB-SSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HH---HHHH-HHHCCCC-C
T ss_pred cCCCc----cccccCCCCccChHHh-ccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HH---HHHH-HHcCCCC-C
Confidence 43221 1334688999999988 556789999999999999999999999965322 11 1111 1222110 0
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
. ..........+.+++.+|++.||++|||+.|++++-
T Consensus 227 -~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 227 -E---SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp -C---TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred -C---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 0 112334556788999999999999999999999863
No 224
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=357.08 Aligned_cols=320 Identities=20% Similarity=0.143 Sum_probs=191.2
Q ss_pred cEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEE
Q 003156 5 KFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTL 84 (843)
Q Consensus 5 ~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L 84 (843)
+.++.++++++ .+|... .++++.|+|++|+|.++.+..|.++++|++|+|++|.|++.. +..|.++++|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L 85 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVE----PGAFNNLFNLRTL 85 (477)
T ss_dssp TEEECCSCCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEEC----TTTTTTCTTCCEE
T ss_pred CEEEeCCCCcC-cCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeC----hhhhhCCccCCEE
Confidence 45677777776 667543 246777777777777776667777777777777777766432 2346666777777
Q ss_pred ecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCccc
Q 003156 85 DLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLT 164 (843)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 164 (843)
+|++|+++...+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|+++
T Consensus 86 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 86 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp ECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred ECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 77777776555556666777777777777776666666667777777777777766666666666666666666666666
Q ss_pred ccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCC
Q 003156 165 GDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSS 244 (843)
Q Consensus 165 ~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~ 244 (843)
+..+..|.++++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|...+.
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~----------------------- 222 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY----------------------- 222 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTT-----------------------
T ss_pred ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCccccc-----------------------
Confidence 555555666666666666666666655556666666666666666554333322211
Q ss_pred CCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccC
Q 003156 245 SSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESR 324 (843)
Q Consensus 245 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 324 (843)
..+|+.|+|++|++++..+..+..+++|++|+|++|.|+++.+..|..+++|++|+|++|++++..|..|..++
T Consensus 223 ------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 296 (477)
T 2id5_A 223 ------GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 296 (477)
T ss_dssp ------TCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCT
T ss_pred ------CccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcc
Confidence 12455555555555533334455555555555555555554444455555555555555555544444444455
Q ss_pred CCcEEEcCCCCCCCCchhhhcccCCCcEEeccccccc
Q 003156 325 SLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLS 361 (843)
Q Consensus 325 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 361 (843)
+|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 297 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 297 YLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp TCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred cCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 5555555555554444444444444444444444444
No 225
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.8e-38 Score=346.04 Aligned_cols=260 Identities=22% Similarity=0.279 Sum_probs=201.7
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-----CCCccceeeEEEcCCee
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-----HPNLISLEGYYWTPQLK 627 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~g~~~~~~~~ 627 (843)
.+.|+..+.||+|+||.||+|++..+++.||||++.... ...+.+..|+.+++.++ ||||+++++++...+..
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 345777889999999999999998899999999985322 23456788999999996 99999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC-------------
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD------------- 694 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~------------- 694 (843)
++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred EEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcc
Confidence 9999999 999999998752 34589999999999999999999998 9999999999999975
Q ss_pred ------------CCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCC
Q 003156 695 ------------NYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPV 762 (843)
Q Consensus 695 ------------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~ 762 (843)
++.+||+|||+++...... ....||+.|+|||++ .+..++.++|||||||++|||++|+.||
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVI-LNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHH-cCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 7899999999998644321 345789999999988 5567899999999999999999999999
Q ss_pred cCCCCchhhHHHHHHHHHhh-----------CCcccccCCC-----CCC-----------------CChhhHHHHHHHHH
Q 003156 763 EYGEDNVVILSEHVRVLLEE-----------GNVLDCVDPS-----MGD-----------------YPEDEVLPVLKLAL 809 (843)
Q Consensus 763 ~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~d~~-----l~~-----------------~~~~~~~~l~~l~~ 809 (843)
..... ...+.. +...... ......++.. .+. ........+.+++.
T Consensus 260 ~~~~~-~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 337 (360)
T 3llt_A 260 RTHEH-MEHLAM-MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY 337 (360)
T ss_dssp CCSSH-HHHHHH-HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred CCCcH-HHHHHH-HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence 75422 111111 1111000 0000000000 000 00011256779999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 003156 810 VCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 810 ~c~~~~P~~RPs~~evl~~ 828 (843)
+||+.||++|||++|++++
T Consensus 338 ~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 338 SILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHCCSSGGGSCCHHHHTTS
T ss_pred HHhcCChhhCCCHHHHhcC
Confidence 9999999999999999864
No 226
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2e-38 Score=354.93 Aligned_cols=202 Identities=22% Similarity=0.269 Sum_probs=168.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcC-----Ce
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTP-----QL 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~ 626 (843)
.+.|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 3557778899999999999999998999999999964322 12346788999999999999999999999766 56
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||++ |+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP----IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999996 6999999764 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccc--------------------eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCC
Q 003156 707 RLLTRLDKH--------------------VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPV 762 (843)
Q Consensus 707 ~~~~~~~~~--------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~ 762 (843)
+........ .......||..|+|||++.....++.++||||+||++|||++|..||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 876543211 11245678999999998656677999999999999999999865554
No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.2e-38 Score=351.70 Aligned_cols=266 Identities=23% Similarity=0.348 Sum_probs=201.1
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC----C--eeE
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP----Q--LKL 628 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~----~--~~~ 628 (843)
.|+..+.||+|+||.||+|++..+|+.||||++.... ..+.+|++++++++||||+++++++... + ..+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 4667779999999999999998889999999986543 2234799999999999999999998542 2 356
Q ss_pred EEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC-CCcEEeeccCcc
Q 003156 629 LVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN-YNPRISDFGLAR 707 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~ 707 (843)
+||||+++ ++.+.+.........+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999975 67776654323346799999999999999999999998 99999999999999955 568999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHH-------H
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVL-------L 780 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~-------~ 780 (843)
.+..... .....+|..|+|||++.....++.++|||||||++|||++|+.||.... ....+.+.++.. +
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~-~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-GVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHH
Confidence 7644322 1345789999999988555678999999999999999999999997542 223333333211 0
Q ss_pred h--hCCcccccCCCCCC------CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhcc
Q 003156 781 E--EGNVLDCVDPSMGD------YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI--LQVIK 833 (843)
Q Consensus 781 ~--~~~~~~~~d~~l~~------~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~--L~~~~ 833 (843)
. .....+...+.+.. ++.....++.+|+.+||+.||++|||+.|++++ ++.+.
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0 01111111111111 223445678999999999999999999999986 44443
No 228
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.9e-38 Score=346.08 Aligned_cols=265 Identities=22% Similarity=0.302 Sum_probs=206.5
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC-----Cee
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP-----QLK 627 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~ 627 (843)
...|+..+.||+|+||.||+|.+..+++.||||++.........+.+.+|++++++++||||+++++++..+ ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 346778889999999999999998899999999986544333446788999999999999999999999765 357
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 99999997 5999999763 489999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccce-eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCC--
Q 003156 708 LLTRLDKHV-MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGN-- 784 (843)
Q Consensus 708 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~-- 784 (843)
......... ......||+.|+|||++.....++.++||||+||++|||++|+.||...... ..+...... .....
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~-~~~~~~~ 254 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-DQLNHILGI-LGSPSQE 254 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-GHHHHHHHH-HCSCCHH
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHHH-hCCCCHH
Confidence 765432221 1244578999999998756667899999999999999999999999654322 222221111 00000
Q ss_pred -------------cccccCCCCC---CCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 785 -------------VLDCVDPSMG---DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 785 -------------~~~~~d~~l~---~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
......+... ........++.+++.+|++.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000 0112345578899999999999999999999986
No 229
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-38 Score=359.63 Aligned_cols=266 Identities=18% Similarity=0.212 Sum_probs=187.7
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcC-----Cee
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTP-----QLK 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~ 627 (843)
+.|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 567788899999999999999988999999999854322 12346788999999999999999999999543 468
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
++||||+ +|+|.+++... ..+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 133 ~lv~e~~-~~~L~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP----VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEecc-ccchhhhcccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 9999998 57899998764 4689999999999999999999998 99999999999999999999999999998
Q ss_pred cccccccc-------------------------eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-----
Q 003156 708 LLTRLDKH-------------------------VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT----- 757 (843)
Q Consensus 708 ~~~~~~~~-------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt----- 757 (843)
........ .......||+.|+|||++.....++.++|||||||++|||++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~ 284 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence 76432111 112345679999999986566779999999999999999999
Q ss_pred ------CCCCCcCCCCc-------------------hhhHHHHHHHHHhhC------------------CcccccCCCCC
Q 003156 758 ------GRRPVEYGEDN-------------------VVILSEHVRVLLEEG------------------NVLDCVDPSMG 794 (843)
Q Consensus 758 ------g~~p~~~~~~~-------------------~~~l~~~~~~~~~~~------------------~~~~~~d~~l~ 794 (843)
|+.+|...... ...+..... ..... .........+.
T Consensus 285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN-ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp CSSGGGCCCSCC--------------------CHHHHHHHHHHHH-HHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHH-HcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 45554322100 001111000 00000 00000000011
Q ss_pred CCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 795 DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 795 ~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
........++.+|+.+|+..||++|||++|++++
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1122335678899999999999999999999997
No 230
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.8e-38 Score=342.60 Aligned_cols=254 Identities=27% Similarity=0.385 Sum_probs=203.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-------ChHHHHHHHHHHHhc-cCCCccceeeEEEcCC
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-------YPEDFEREVRVLGKA-RHPNLISLEGYYWTPQ 625 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 625 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||++....... ..+.+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 44666678999999999999998889999999986543211 134678999999999 7999999999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccC
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGL 705 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 705 (843)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCc
Confidence 999999999999999999875 4689999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccceeccccccccccCCcccccC-----cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH
Q 003156 706 ARLLTRLDKHVMSNRFQSALGYVAPELTCQ-----SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 706 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
+..+..... .....||+.|+|||++.. ...++.++|||||||++|||++|+.||..... .. .... +
T Consensus 247 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~---~~~~-i 317 (365)
T 2y7j_A 247 SCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--IL---MLRM-I 317 (365)
T ss_dssp CEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HHHH-H
T ss_pred ccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HH---HHHH-H
Confidence 987654322 244678999999998732 23578999999999999999999999965321 11 1111 1
Q ss_pred hhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 781 EEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 781 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+... ...+ ........+.+++.+||+.||++|||+.|++++
T Consensus 318 ~~~~~~-~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 MEGQYQ-FSSP----EWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHTCCC-CCHH----HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhCCCC-CCCc----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111110 0000 011234568899999999999999999999975
No 231
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.8e-40 Score=361.23 Aligned_cols=253 Identities=17% Similarity=0.153 Sum_probs=192.2
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHH---HHHHhccCCCcccee-------eE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREV---RVLGKARHPNLISLE-------GY 620 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~---~~l~~l~h~niv~l~-------g~ 620 (843)
.+.|+..+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4557778899999999999999987899999999975422 22346788999 455555899999998 66
Q ss_pred EEcCCe-----------------eEEEEEeCCCCCHHHHHhhcCC---CCCCCChhHHHHHHHHHHHHHHhhhhcCCCCe
Q 003156 621 YWTPQL-----------------KLLVSDYAPNGSLQAKLHERLP---STPPLSWTNRFKVILGTAKGLAHLHHSFRPPI 680 (843)
Q Consensus 621 ~~~~~~-----------------~~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 680 (843)
+.+++. .++||||+ +|+|.+++..... ....+++..++.|+.|++.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 665532 78999999 6899999986421 112344688889999999999999999 99
Q ss_pred eecCCCCCCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCc----------CCCCCchhHHHHHH
Q 003156 681 IHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQS----------LRVNEKCDIYGFGV 750 (843)
Q Consensus 681 vH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----------~~~~~~~Dv~S~Gv 750 (843)
+||||||+|||++.++.+||+|||+++.... ......| ..|+|||++... ..++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985432 1134466 899999988433 26899999999999
Q ss_pred HHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--
Q 003156 751 LILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI-- 828 (843)
Q Consensus 751 il~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~-- 828 (843)
++|||++|+.||....... ....+.. .....+.++.+++.+||+.||++|||+.|++++
T Consensus 302 il~elltg~~Pf~~~~~~~---------------~~~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 362 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALG---------------GSEWIFR----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 362 (377)
T ss_dssp HHHHHHHSSCCC------C---------------CSGGGGS----SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred HHHHHHHCCCCCccccccc---------------chhhhhh----hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence 9999999999996432111 0000101 112334578899999999999999999999874
Q ss_pred HHhccC
Q 003156 829 LQVIKT 834 (843)
Q Consensus 829 L~~~~~ 834 (843)
++.+..
T Consensus 363 f~~~~~ 368 (377)
T 3byv_A 363 YEQLRT 368 (377)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 232
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.8e-38 Score=357.18 Aligned_cols=254 Identities=24% Similarity=0.317 Sum_probs=206.2
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
..+.|+..+.||+|+||+||+|.+..+++.||||++..... ......+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 45667888899999999999999988999999999864322 23457889999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc---CCCCcEEeeccCcc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD---DNYNPRISDFGLAR 707 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgl~~ 707 (843)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 9999999999999875 4589999999999999999999999 999999999999995 56679999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
....... .....||+.|+|||++.. .++.++||||+||++|+|++|+.||..... .. ..... ..+....
T Consensus 173 ~~~~~~~---~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~----~~~~i-~~~~~~~ 241 (486)
T 3mwu_A 173 CFQQNTK---MKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNE-YD----ILKRV-ETGKYAF 241 (486)
T ss_dssp TBCCC-------CCTTGGGGCCGGGGGS--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HH----HHHHH-HHTCCCS
T ss_pred ECCCCCc---cCCCcCCCCCCCHHHhCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HH----HHHHH-HhCCCCC
Confidence 7654322 234578999999998843 589999999999999999999999965322 11 11111 1111110
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. .........+.+++.+||+.||++|||+.|++++
T Consensus 242 ----~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 ----DL-PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ----CS-GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ----CC-cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 1123445678899999999999999999999997
No 233
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2e-38 Score=341.46 Aligned_cols=255 Identities=20% Similarity=0.292 Sum_probs=199.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-------ccChHHHHHHHHHHHhccCCCccceeeEEEcCC
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-------IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 625 (843)
.+.|+..+.||+|+||.||+|.+..+++.||||.+..... ......+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 4567788899999999999999988899999999854321 112245889999999999999999999987665
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC---cEEee
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN---PRISD 702 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 702 (843)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 79999999999999998754 4689999999999999999999998 9999999999999986654 99999
Q ss_pred ccCcccccccccceeccccccccccCCccccc--CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH
Q 003156 703 FGLARLLTRLDKHVMSNRFQSALGYVAPELTC--QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 703 fgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
||+++....... .....||..|+|||++. ....++.++|||||||++|||++|+.||........ +...+
T Consensus 161 fg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~---- 232 (322)
T 2ycf_A 161 FGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQI---- 232 (322)
T ss_dssp CTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHH----
T ss_pred Cccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHH----
Confidence 999987643221 13456889999999863 345688999999999999999999999975433221 11111
Q ss_pred hhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 781 EEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 781 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+... ..+.........+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 TSGKYN-----FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTCCC-----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhCccc-----cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 111110 0000112345678899999999999999999999863
No 234
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.9e-38 Score=357.66 Aligned_cols=254 Identities=23% Similarity=0.340 Sum_probs=202.2
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
..+.|+..+.||+|+||.||+|++..++..||+|.+..... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 45678888899999999999999998999999999865432 23457789999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC---CCCcEEeeccCcc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---NYNPRISDFGLAR 707 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~ 707 (843)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 115 ~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 115 MECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 9999999999998875 4589999999999999999999998 9999999999999975 4559999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
....... .....||+.|+|||++. ..++.++||||+||++|+|++|+.||..... . ...... ..+...
T Consensus 188 ~~~~~~~---~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~----~~~~~i-~~~~~~- 255 (494)
T 3lij_A 188 VFENQKK---MKERLGTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-Q----EILRKV-EKGKYT- 255 (494)
T ss_dssp ECBTTBC---BCCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-H----HHHHHH-HHTCCC-
T ss_pred ECCCCcc---ccccCCCcCeeCHHHHc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-H----HHHHHH-HhCCCC-
Confidence 7654322 24457899999999873 3589999999999999999999999975422 1 111111 111111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...+ ........+.+++.+||+.||++|||+.|++++
T Consensus 256 ~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 FDSP----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CCSG----GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCch----hcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0000 112344578899999999999999999999875
No 235
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7e-38 Score=341.52 Aligned_cols=272 Identities=22% Similarity=0.295 Sum_probs=206.5
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcC-------
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTP------- 624 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------- 624 (843)
.+.|+..+.||+|+||.||+|++..+|+.||+|++..... ......+.+|+.++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 4567788899999999999999988999999999855433 23356788999999999999999999999873
Q ss_pred -CeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeec
Q 003156 625 -QLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDF 703 (843)
Q Consensus 625 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 703 (843)
+..++||||+++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 467899999975 788877764 34589999999999999999999998 9999999999999999999999999
Q ss_pred cCccccccccc--ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHh
Q 003156 704 GLARLLTRLDK--HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLE 781 (843)
Q Consensus 704 gl~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~ 781 (843)
|+++.+..... ........||+.|+|||++.....++.++|||||||++|||++|+.||..... ...+. .+.....
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~-~i~~~~~ 246 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE-QHQLA-LISQLCG 246 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHH-HHHHHHC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHH-HHHHHhC
Confidence 99987653221 11223456799999999885556789999999999999999999999975322 21221 1111111
Q ss_pred hCCcccccCCCC------------CC--CC-hh------hHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 782 EGNVLDCVDPSM------------GD--YP-ED------EVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 782 ~~~~~~~~d~~l------------~~--~~-~~------~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
.......+.. .. .. .+ ....+.+++.+|++.||++|||++|++++-.--..+
T Consensus 247 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 319 (351)
T 3mi9_A 247 --SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 319 (351)
T ss_dssp --CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred --CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence 1000000000 00 00 00 134578999999999999999999999974433333
No 236
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=6.2e-38 Score=358.44 Aligned_cols=254 Identities=24% Similarity=0.355 Sum_probs=203.6
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc------------cChHHHHHHHHHHHhccCCCccceee
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII------------QYPEDFEREVRVLGKARHPNLISLEG 619 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~l~g 619 (843)
..+.|+..+.||+|+||+||+|.+..+++.||+|.+...... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 346678888999999999999999988999999998654321 34567899999999999999999999
Q ss_pred EEEcCCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC---
Q 003156 620 YYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY--- 696 (843)
Q Consensus 620 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~--- 696 (843)
++.+....++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 999999999999999999999999875 4589999999999999999999998 999999999999998765
Q ss_pred CcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHH
Q 003156 697 NPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHV 776 (843)
Q Consensus 697 ~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~ 776 (843)
.+||+|||+++....... .....||+.|+|||++. ..++.++||||+||++|+|++|+.||...... ...
T Consensus 187 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~ 256 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-----DII 256 (504)
T ss_dssp SEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred cEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHhc--cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 699999999987654322 24457899999999873 35899999999999999999999999754221 111
Q ss_pred HHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 777 RVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 777 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. +..+.... + . ......+.++.+++.+|++.||++|||++|++++
T Consensus 257 ~~-i~~~~~~~--~--~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 257 KK-VEKGKYYF--D--F-NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HH-HHHCCCCC--C--H-HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH-HHcCCCCC--C--c-cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11 12221100 0 0 0012334578899999999999999999999986
No 237
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3e-38 Score=359.66 Aligned_cols=254 Identities=25% Similarity=0.360 Sum_probs=208.7
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
..+.|+..+.||+|+||.||+|....+|+.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 45678888899999999999999998999999999865432 3356789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE---cCCCCcEEeeccCc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL---DDNYNPRISDFGLA 706 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~ 706 (843)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 99999999999999864 4689999999999999999999999 99999999999999 56789999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcc
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVL 786 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 786 (843)
+.+..... .....||+.|+|||++.. .++.++||||+||++|+|++|+.||..... .. .... +..+...
T Consensus 177 ~~~~~~~~---~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~----~~~~-i~~~~~~ 245 (484)
T 3nyv_A 177 THFEASKK---MKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANE-YD----ILKK-VEKGKYT 245 (484)
T ss_dssp HHBCCCCS---HHHHTTGGGTCCHHHHHT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HH----HHHH-HHHCCCC
T ss_pred EEcccccc---cccCCCCccccCceeecC--CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-HH----HHHH-HHcCCCC
Confidence 87654322 234568999999998733 589999999999999999999999975422 11 1111 1222111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 787 DCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 787 ~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
... ......+..+.+++.+||+.||++|||+.|++++
T Consensus 246 ----~~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 246 ----FEL-PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ----CCS-GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----CCC-cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 000 1123455678899999999999999999999986
No 238
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3e-37 Score=349.66 Aligned_cols=347 Identities=25% Similarity=0.335 Sum_probs=299.4
Q ss_pred cCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCC
Q 003156 48 NYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCP 127 (843)
Q Consensus 48 ~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 127 (843)
..+++|++|++++|.+...+ .+..+++|++|+|++|.+.+..+ +..+++|++|++++|.+++..+ +.+++
T Consensus 43 ~~l~~l~~L~l~~~~i~~l~------~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~ 112 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKSID------GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLT 112 (466)
T ss_dssp HHHHTCCEEECCSSCCCCCT------TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCT
T ss_pred hHhccccEEecCCCCCccCc------chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCC
Confidence 44678999999999988543 36789999999999999996544 9999999999999999996655 99999
Q ss_pred CCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEec
Q 003156 128 HLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLR 207 (843)
Q Consensus 128 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 207 (843)
+|++|++++|.+++..+ +..+++|++|++++|++.+ ++ .++.+++|++|+++ |.+.+. ..+.++++|+.|+++
T Consensus 113 ~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~--~~~~~l~~L~~L~l~ 185 (466)
T 1o6v_A 113 NLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL--KPLANLTTLERLDIS 185 (466)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC--GGGTTCTTCCEEECC
T ss_pred CCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCc--hhhccCCCCCEEECc
Confidence 99999999999997643 8999999999999999985 33 48999999999997 555533 238999999999999
Q ss_pred CCcCCCCCCchhhcc-CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCC
Q 003156 208 GNSLNGNIPEGLFDL-GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSN 286 (843)
Q Consensus 208 ~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 286 (843)
+|.+++ ++. +..+ +|+.|++++|.+.+..| ...+++|+.|++++|++++. ..+..+++|++|++++|
T Consensus 186 ~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--------~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 253 (466)
T 1o6v_A 186 SNKVSD-ISV-LAKLTNLESLIATNNQISDITP--------LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANN 253 (466)
T ss_dssp SSCCCC-CGG-GGGCTTCSEEECCSSCCCCCGG--------GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred CCcCCC-Chh-hccCCCCCEEEecCCccccccc--------ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCC
Confidence 999984 433 4443 79999999999986543 34578999999999999853 46889999999999999
Q ss_pred cccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCc
Q 003156 287 HLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPK 366 (843)
Q Consensus 287 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 366 (843)
.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..|
T Consensus 254 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 254 QISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp CCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-
T ss_pred ccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-
Confidence 9987654 8899999999999999996544 8899999999999999997655 8899999999999999997666
Q ss_pred cccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecCCCCCCCCCCCCCCcCCCCCCCC
Q 003156 367 SISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGICS 434 (843)
Q Consensus 367 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~ 434 (843)
+..+++|+.|++++|++++. ..+.++++|+.|++++|++++.+| ...++++....+.+|+..+.
T Consensus 327 -~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 327 -VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEECC
T ss_pred -hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccCC
Confidence 78999999999999999965 578999999999999999999998 57788888888999987654
No 239
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.3e-37 Score=350.06 Aligned_cols=260 Identities=13% Similarity=0.180 Sum_probs=206.0
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccC-CCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARH-PNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.++| +++..+..++...+..++|||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 457778899999999999999988999999998765432 2458899999999987 556666666677888899999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE---cCCCCcEEeeccCcccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL---DDNYNPRISDFGLARLL 709 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~~ 709 (843)
|+ +++|.+++... ...+++..++.|+.|++.||+|||+. +||||||||+|||+ +.++.+||+|||+++.+
T Consensus 84 ~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 99999999864 34699999999999999999999998 99999999999999 68899999999999876
Q ss_pred cccccc-----eeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCch--hhHHHHHHHHHhh
Q 003156 710 TRLDKH-----VMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV--VILSEHVRVLLEE 782 (843)
Q Consensus 710 ~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~--~~l~~~~~~~~~~ 782 (843)
...... .......||..|+|||++ .+..++.++|||||||++|||++|+.||....... ..+.........
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~- 234 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTH-LGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA- 234 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-
T ss_pred cCCccccccccccccccCCCccccCHHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-
Confidence 543321 112356789999999998 55678999999999999999999999997653321 112111111111
Q ss_pred CCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 783 GNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 783 ~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
..... .....+.++.+++..||+.+|++||++.++++.|+.+.
T Consensus 235 ~~~~~--------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 235 TSIEA--------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp SCHHH--------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccHHH--------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 11100 11233457899999999999999999999999998873
No 240
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=7.6e-39 Score=351.65 Aligned_cols=254 Identities=11% Similarity=-0.013 Sum_probs=183.1
Q ss_pred hhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhc--cCCCcccee-------eEEEcC
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKA--RHPNLISLE-------GYYWTP 624 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l--~h~niv~l~-------g~~~~~ 624 (843)
|+..+.||+|+||.||+|.+..+|+.||||++...... ...+.+.+|+.+++.+ +||||++++ +++..+
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 66777999999999999999889999999999765431 2345677886555555 599988754 454433
Q ss_pred -----------------CeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHH------HHHHHHHHHHHHhhhhcCCCCee
Q 003156 625 -----------------QLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNR------FKVILGTAKGLAHLHHSFRPPII 681 (843)
Q Consensus 625 -----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~iv 681 (843)
...++||||++ |+|.+++... ...+.+..+ ..++.|+++||+|||++ +|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 23799999998 8999999875 223466666 78889999999999998 999
Q ss_pred ecCCCCCCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccC-cCCCCCchhHHHHHHHHHHHHhCCC
Q 003156 682 HYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQ-SLRVNEKCDIYGFGVLILELVTGRR 760 (843)
Q Consensus 682 H~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~~Dv~S~Gvil~elltg~~ 760 (843)
||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.. ...++.++|||||||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999998654311 13456699999998843 1578999999999999999999999
Q ss_pred CCcCCCCchhhHHHHHHHHHhhCCcccccCCCC-CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 761 PVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSM-GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 761 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
||.......... .............. ..........+.+++.+||+.||++|||+.|++++
T Consensus 292 Pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 292 PFGLVTPGIKGS-------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp STTBCCTTCTTC-------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCcCcccccc-------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 997653221100 00000000000010 01123556788999999999999999999999864
No 241
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.9e-38 Score=347.45 Aligned_cols=272 Identities=20% Similarity=0.291 Sum_probs=196.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCe------
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQL------ 626 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------ 626 (843)
.+.|+..+.||+|+||.||+|.+..+|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp HTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence 345677789999999999999998889999999986543 233567788899999999999999999975433
Q ss_pred -eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhh--hcCCCCeeecCCCCCCEEEcC-CCCcEEee
Q 003156 627 -KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLH--HSFRPPIIHYNLKPSNILLDD-NYNPRISD 702 (843)
Q Consensus 627 -~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~dlk~~Nill~~-~~~~kl~D 702 (843)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+||+++. ++.+||+|
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECC
T ss_pred eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEee
Confidence 7899999976 566555543334567899999999999999999999 76 9999999999999996 89999999
Q ss_pred ccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH--
Q 003156 703 FGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL-- 780 (843)
Q Consensus 703 fgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~-- 780 (843)
||+++........ ....||..|+|||++.....++.++|||||||++|||++|+.||..... ...+...++...
T Consensus 176 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 176 FGSAKKLSPSEPN---VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVLGCP 251 (360)
T ss_dssp CTTCBCCCTTSCC---CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCC
T ss_pred CCCceecCCCCCc---ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHcCCC
Confidence 9999876543322 3456899999999885666689999999999999999999999975432 222222222110
Q ss_pred ---------hhCCcccccCCC-------CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhccC
Q 003156 781 ---------EEGNVLDCVDPS-------MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI--LQVIKT 834 (843)
Q Consensus 781 ---------~~~~~~~~~d~~-------l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~--L~~~~~ 834 (843)
......+..+.. ..........++.+++.+||+.||++|||+.|++++ ++.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 000000000000 011223356789999999999999999999999987 555544
No 242
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=343.42 Aligned_cols=258 Identities=26% Similarity=0.326 Sum_probs=187.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CCCccceeeEEE--------cC
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HPNLISLEGYYW--------TP 624 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~--------~~ 624 (843)
..|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++++. ||||+++++++. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 35677789999999999999998899999999985543 233467889999999996 999999999994 23
Q ss_pred CeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCC--eeecCCCCCCEEEcCCCCcEEee
Q 003156 625 QLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPP--IIHYNLKPSNILLDDNYNPRISD 702 (843)
Q Consensus 625 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~D 702 (843)
...++||||++ |+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 34789999995 79999987632 234699999999999999999999998 7 99999999999999999999999
Q ss_pred ccCcccccccccce----------eccccccccccCCccccc--CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchh
Q 003156 703 FGLARLLTRLDKHV----------MSNRFQSALGYVAPELTC--QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVV 770 (843)
Q Consensus 703 fgl~~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~--~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~ 770 (843)
||+++......... ......||+.|+|||++. ....++.++|||||||++|||++|+.||.......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~- 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR- 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence 99998765432211 111345889999999873 34567899999999999999999999996432210
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccC
Q 003156 771 ILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKT 834 (843)
Q Consensus 771 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~ 834 (843)
.. .. .. .. .........+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 261 ----~~----~~-~~----~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 261 ----IV----NG-KY----SI---PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp --------------C----CC---CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----hh----cC-cc----cC---CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00 00 00 00 0112223347789999999999999999999999988854
No 243
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.2e-37 Score=329.52 Aligned_cols=254 Identities=27% Similarity=0.338 Sum_probs=205.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--------cChHHHHHHHHHHHhcc-CCCccceeeEEEcC
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--------QYPEDFEREVRVLGKAR-HPNLISLEGYYWTP 624 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~ 624 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||.+...... ...+.+.+|++++++++ ||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (298)
T 1phk_A 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 96 (298)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence 4567778999999999999999889999999998654311 12356789999999996 99999999999999
Q ss_pred CeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeecc
Q 003156 625 QLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFG 704 (843)
Q Consensus 625 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 704 (843)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 97 TFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999875 4689999999999999999999998 99999999999999999999999999
Q ss_pred CcccccccccceeccccccccccCCccccc-----CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHH
Q 003156 705 LARLLTRLDKHVMSNRFQSALGYVAPELTC-----QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVL 779 (843)
Q Consensus 705 l~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~ 779 (843)
+++....... .....++..|+|||++. ....++.++||||||+++|||++|+.||..... . ......
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~---~~~~~~ 241 (298)
T 1phk_A 170 FSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--M---LMLRMI 241 (298)
T ss_dssp TCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHH
T ss_pred chhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--H---HHHHHH
Confidence 9987654322 23456889999999873 244678999999999999999999999965322 1 111111
Q ss_pred HhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 780 LEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 780 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. +... .. .......+..+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~-~~~~-~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 242 MS-GNYQ-FG----SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HH-TCCC-CC----TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred hc-CCcc-cC----cccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 11 1111 00 01123456678999999999999999999999875
No 244
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.1e-38 Score=336.11 Aligned_cols=263 Identities=28% Similarity=0.406 Sum_probs=198.6
Q ss_pred hhhhhhcCeeccccceEEEEEEECC-CC--eEEEEEEeecCCc--ccChHHHHHHHHHHHhccCCCccceeeEEEcCCee
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGT-QG--RMLAVKKLVTSDI--IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLK 627 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~--~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 627 (843)
.+.|+..+.||+|+||.||+|++.. ++ ..||+|.+..... ....+.+.+|+.++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 4557778899999999999999743 33 3689998865432 223467899999999999999999999998765 7
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
++|+||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 8999999999999999875 24589999999999999999999998 99999999999999999999999999998
Q ss_pred cccccccce-eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCc
Q 003156 708 LLTRLDKHV-MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNV 785 (843)
Q Consensus 708 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~ 785 (843)
......... ......+|..|+|||.+ ....++.++||||||+++|||++ |+.||...... ............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~ 243 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESL-KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILHKIDKEGER 243 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTSCCC
T ss_pred cccccccchhhhccCCCCceeeCchhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHHHHHHccCCC
Confidence 765433222 22345677889999988 45568899999999999999999 99999654221 111111111111
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 786 LDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 786 ~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
...+...+.++.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 244 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 244 --------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred --------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 1123455677899999999999999999999999999886543
No 245
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.1e-37 Score=348.18 Aligned_cols=260 Identities=20% Similarity=0.238 Sum_probs=201.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc------cCCCccceeeEEEcCCee
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA------RHPNLISLEGYYWTPQLK 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~g~~~~~~~~ 627 (843)
..|+..+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+ .|+||+++++++......
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 45778889999999999999998889999999985432 2345678899998888 467999999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC--cEEeeccC
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN--PRISDFGL 705 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgl 705 (843)
++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 99999996 69999998752 34589999999999999999999999 9999999999999998887 99999999
Q ss_pred cccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHH------
Q 003156 706 ARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVL------ 779 (843)
Q Consensus 706 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~------ 779 (843)
++..... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||.... ....+...+...
T Consensus 249 a~~~~~~-----~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltG~~pf~~~~-~~~~l~~i~~~~~~p~~~ 321 (429)
T 3kvw_A 249 SCYEHQR-----VYTYIQSRFYRAPEVI-LGARYGMPIDMWSLGCILAELLTGYPLLPGED-EGDQLACMIELLGMPSQK 321 (429)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHH-HTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCHH
T ss_pred ceecCCc-----ccccCCCCCccChHHH-hCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHcCCCCHH
Confidence 9754321 1345788999999988 45578999999999999999999999996542 222222222210
Q ss_pred -HhhC-CcccccCCC---------------------------------CCC----CChhhHHHHHHHHHHccCCCCCCCC
Q 003156 780 -LEEG-NVLDCVDPS---------------------------------MGD----YPEDEVLPVLKLALVCTCHIPSSRP 820 (843)
Q Consensus 780 -~~~~-~~~~~~d~~---------------------------------l~~----~~~~~~~~l~~l~~~c~~~~P~~RP 820 (843)
.... .....++.. ... ........+.+++.+||+.||++||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rp 401 (429)
T 3kvw_A 322 LLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401 (429)
T ss_dssp HHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCC
Confidence 0000 000000000 000 1112245688999999999999999
Q ss_pred CHHHHHHH
Q 003156 821 SMAEVVQI 828 (843)
Q Consensus 821 s~~evl~~ 828 (843)
|++|++++
T Consensus 402 ta~e~L~H 409 (429)
T 3kvw_A 402 TPGQALRH 409 (429)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhCC
Confidence 99999986
No 246
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.1e-38 Score=346.12 Aligned_cols=270 Identities=22% Similarity=0.307 Sum_probs=204.9
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcC-----Cee
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTP-----QLK 627 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~~ 627 (843)
.+.|+..+.||+|+||.||+|.+..+|+.||||++...........+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 345677789999999999999998889999999986544333446788999999999999999999998754 567
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 6899998763 589999999999999999999998 99999999999999999999999999998
Q ss_pred cccccccce--------eccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHH
Q 003156 708 LLTRLDKHV--------MSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVL 779 (843)
Q Consensus 708 ~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~ 779 (843)
......... ......||..|+|||++.....++.++|||||||++|||++|+.||...... ..+.... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~-~~ 238 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR-HQLLLIF-GI 238 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH-HH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHH-HH
Confidence 765322111 1123468999999998756677899999999999999999999999754321 1111111 11
Q ss_pred HhhCC---cccccC----------------CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhcc
Q 003156 780 LEEGN---VLDCVD----------------PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI--LQVIK 833 (843)
Q Consensus 780 ~~~~~---~~~~~d----------------~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~--L~~~~ 833 (843)
..... ...++. ..+.........++.+++.+||+.||++|||++|++++ ++...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 11000 000000 00000112445678899999999999999999999986 44443
No 247
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=334.28 Aligned_cols=254 Identities=24% Similarity=0.281 Sum_probs=202.4
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc---ccChHHHHHHHHHHHhccCCCccceeeEEEc--CCeeEE
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI---IQYPEDFEREVRVLGKARHPNLISLEGYYWT--PQLKLL 629 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l 629 (843)
.|+..+.||+|+||.||+|.+..+++.||+|.+..... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 46677899999999999999988999999999865421 2234678999999999999999999999854 457899
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++| +.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 99999877 778777642 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccceeccccccccccCCcccccCc-CCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQS-LRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
.............|+..|+|||++... ..++.++||||||+++|||++|+.||..... . ..... +..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~---~~~~~-i~~~~~--- 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--Y---KLFEN-IGKGSY--- 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--H---HHHHH-HHHCCC---
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--H---HHHHH-HhcCCC---
Confidence 543333333456789999999987432 2347799999999999999999999975321 1 11111 111111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
..+......+.+++.+||+.||++|||++|++++-
T Consensus 231 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 231 ------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp ------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred ------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 12344566788999999999999999999999873
No 248
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=337.45 Aligned_cols=256 Identities=23% Similarity=0.370 Sum_probs=199.4
Q ss_pred ChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEc------
Q 003156 551 DPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWT------ 623 (843)
Q Consensus 551 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~------ 623 (843)
...+.|+..+.||+|+||.||+|.+..+|+.||+|.+.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence 35566788889999999999999998899999999986543 2357889999999999 79999999999986
Q ss_pred CCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeec
Q 003156 624 PQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDF 703 (843)
Q Consensus 624 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 703 (843)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred cceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeC
Confidence 457899999999999999998742 34688999999999999999999998 9999999999999999999999999
Q ss_pred cCcccccccccceeccccccccccCCcccccC----cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHH
Q 003156 704 GLARLLTRLDKHVMSNRFQSALGYVAPELTCQ----SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVL 779 (843)
Q Consensus 704 gl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~ 779 (843)
|+++....... ......|+..|+|||++.. ...++.++|||||||++|||++|+.||....... . ...
T Consensus 174 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~----~~~- 245 (326)
T 2x7f_A 174 GVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-A----LFL- 245 (326)
T ss_dssp TTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-H----HHH-
T ss_pred cCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-H----HHH-
Confidence 99986543211 1234568899999998742 4568899999999999999999999996532211 1 111
Q ss_pred HhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 780 LEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 780 ~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+..... +.. ........+.+++.+||..||++|||+.|++++
T Consensus 246 ~~~~~~-----~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 246 IPRNPA-----PRL--KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHSCC-----CCC--SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhcCcc-----ccC--CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111111 111 123344578899999999999999999999885
No 249
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.9e-38 Score=367.92 Aligned_cols=258 Identities=22% Similarity=0.329 Sum_probs=205.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECC---CCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEE
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGT---QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l 629 (843)
.+.|+..+.||+|+||.||+|.+.. .+..||+|.+.........+.|.+|+.++++++||||++++|++. .+..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 3557778899999999999999854 356799999865443334467899999999999999999999985 456899
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 468 v~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 99999999999999865 34689999999999999999999998 9999999999999999999999999999876
Q ss_pred cccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 710 TRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 710 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
...... ......+|+.|+|||++ ....++.++|||||||++|||++ |..||...... .. ... +..+..
T Consensus 542 ~~~~~~-~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~---~~~-i~~~~~--- 610 (656)
T 2j0j_A 542 EDSTYY-KASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DV---IGR-IENGER--- 610 (656)
T ss_dssp CC-----------CCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HH---HHH-HHHTCC---
T ss_pred CCCcce-eccCCCCCcceeCHHHh-cCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HH---HHH-HHcCCC---
Confidence 543222 22344567899999988 55678999999999999999997 99999654221 11 111 111211
Q ss_pred cCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhcc
Q 003156 789 VDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 833 (843)
Q Consensus 789 ~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~ 833 (843)
...+..++..+.+++.+||..||++|||+.|+++.|+.+.
T Consensus 611 -----~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 611 -----LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1234455678899999999999999999999999998874
No 250
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.3e-38 Score=342.87 Aligned_cols=259 Identities=18% Similarity=0.239 Sum_probs=204.0
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccC----------------hHHHHHHHHHHHhccCCCccce
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQY----------------PEDFEREVRVLGKARHPNLISL 617 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----------------~~~~~~E~~~l~~l~h~niv~l 617 (843)
+.|+..+.||+|+||.||+|.+ +|+.||+|.+........ .+.+.+|+.++++++||||+++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred CceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 4577778999999999999999 899999999865432211 1789999999999999999999
Q ss_pred eeEEEcCCeeEEEEEeCCCCCHHHH------HhhcCCCCCCCChhHHHHHHHHHHHHHHhhhh-cCCCCeeecCCCCCCE
Q 003156 618 EGYYWTPQLKLLVSDYAPNGSLQAK------LHERLPSTPPLSWTNRFKVILGTAKGLAHLHH-SFRPPIIHYNLKPSNI 690 (843)
Q Consensus 618 ~g~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Ni 690 (843)
++++.+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 4432 24679999999999999999999998 7 999999999999
Q ss_pred EEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCC-chhHHHHHHHHHHHHhCCCCCcCCCCch
Q 003156 691 LLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNE-KCDIYGFGVLILELVTGRRPVEYGEDNV 769 (843)
Q Consensus 691 ll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~~Dv~S~Gvil~elltg~~p~~~~~~~~ 769 (843)
+++.++.+||+|||.++..... ......|+..|+|||.+.....++. ++|||||||++|||++|+.||.......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 259 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred EEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 9999999999999999875432 2245678999999999854435555 9999999999999999999997654322
Q ss_pred hhHHHHHHHHHhhCCcccccC------CCC----CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 770 VILSEHVRVLLEEGNVLDCVD------PSM----GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 770 ~~l~~~~~~~~~~~~~~~~~d------~~l----~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.... . +..+......+ +.. ..........+.+++.+||+.||++|||+.|++++
T Consensus 260 ~~~~----~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 260 ELFN----N-IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHH----H-HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHH----H-HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2111 1 11111110000 000 00114455678999999999999999999999885
No 251
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1e-37 Score=342.44 Aligned_cols=261 Identities=22% Similarity=0.251 Sum_probs=192.2
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCC------e
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQ------L 626 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~ 626 (843)
..|+..+.||+|+||.||+|....+++.||||++..... ....+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 457778899999999999999988999999999865432 223456889999999999999999999997665 6
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||++ |+|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred eEEEEEcCC-CCHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 799999997 578888863 388999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHH---------
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVR--------- 777 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~--------- 777 (843)
+...... ......||..|+|||++ .+..++.++||||+||++|||++|+.||..... ...+...++
T Consensus 175 ~~~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~ 249 (371)
T 2xrw_A 175 RTAGTSF---MMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEF 249 (371)
T ss_dssp ------------------CTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHC-CCCCCHHH
T ss_pred ccccccc---ccCCceecCCccCHHHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHH
Confidence 8654321 12345789999999988 456789999999999999999999999975422 111111110
Q ss_pred ---------HHHhhCCccc----------ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 778 ---------VLLEEGNVLD----------CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 778 ---------~~~~~~~~~~----------~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
.......... ..-+............+.+++.+|++.||++|||++|++++-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 0000000000 000000001122356789999999999999999999999873
No 252
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.1e-38 Score=335.20 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=196.0
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEc---------
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWT--------- 623 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--------- 623 (843)
.+.|+..+.||+|+||.||+|+...+++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 355677789999999999999998899999999985432 234678899999999999999999999865
Q ss_pred ----CCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcE
Q 003156 624 ----PQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPR 699 (843)
Q Consensus 624 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 699 (843)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 34578999999999999999864 34578889999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccccc------------ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCC
Q 003156 700 ISDFGLARLLTRLDK------------HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGED 767 (843)
Q Consensus 700 l~Dfgl~~~~~~~~~------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~ 767 (843)
|+|||+++....... ........|+..|+|||++.....++.++|||||||++|||++ ||.....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~ 233 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME 233 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh
Confidence 999999986643211 1112345688999999998555578999999999999999998 5542211
Q ss_pred chhhHHHHHHHHHhhCCcccccCCCC-CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 768 NVVILSEHVRVLLEEGNVLDCVDPSM-GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 768 ~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
. ...... +... .... ..++......+.+++.+||+.||++|||+.|++++
T Consensus 234 ~----~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 R----VNILKK-LRSV------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp H----HHHHHH-HHST------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred H----HHHHHh-cccc------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1 111111 1111 1111 12445556678899999999999999999999985
No 253
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.3e-37 Score=343.97 Aligned_cols=266 Identities=21% Similarity=0.326 Sum_probs=198.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCe------e
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQL------K 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------~ 627 (843)
..|+..+.||+|+||.||+|++.. +..||+|++...... ..+|+++++.++||||+++++++..... .
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVE-SDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETT-TEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECC-CCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 346778899999999999999974 445999988654321 2379999999999999999999965432 6
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc-CCCCcEEeeccCc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD-DNYNPRISDFGLA 706 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~ 706 (843)
++||||++++ +.+.+.........+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 114 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 114 NLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 8999999875 4444433222345789999999999999999999998 999999999999999 8999999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH------
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL------ 780 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~------ 780 (843)
+........ ....+|..|+|||++.....++.++||||+||++|||++|+.||.... ....+...++..-
T Consensus 190 ~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 190 KILIAGEPN---VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES-GIDQLVEIIKVLGTPSREQ 265 (394)
T ss_dssp EECCTTCCC---CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCHHH
T ss_pred ccccCCCCC---cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHH
Confidence 876443322 345678999999988666679999999999999999999999997542 2222332222110
Q ss_pred -h--hCCcccccCCCCCC------CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH--HHhcc
Q 003156 781 -E--EGNVLDCVDPSMGD------YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI--LQVIK 833 (843)
Q Consensus 781 -~--~~~~~~~~d~~l~~------~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~--L~~~~ 833 (843)
. ........-+.... ++.....++.+++.+||+.||++|||+.|++++ ++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 0 00000000011111 233455678999999999999999999999987 44443
No 254
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.1e-38 Score=346.29 Aligned_cols=259 Identities=24% Similarity=0.312 Sum_probs=185.1
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcC------Ce
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTP------QL 626 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~ 626 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 557778899999999999999988999999999854321 22345788999999999999999999999754 45
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred EEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 79999999 7899988865 3589999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhC---
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEG--- 783 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~--- 783 (843)
+..... .....||..|+|||++.....++.++||||+||++|||++|+.||.... ....+....+......
T Consensus 180 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~l~~i~~~~g~p~~~~ 253 (367)
T 2fst_X 180 RHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-HIDQLKLILRLVGTPGAEL 253 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCSCCHHH
T ss_pred cccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHH
Confidence 865431 1345789999999988665778999999999999999999999996532 2222222221110000
Q ss_pred --Cc--------ccccCCCCCC-----CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 784 --NV--------LDCVDPSMGD-----YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 784 --~~--------~~~~d~~l~~-----~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. ...+ +.... ........+.+++.+|++.||++|||+.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSESARNYIQSL-TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCHHHHHHHHTS-CCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhHHHHHHHhcc-CCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00 0000 00000 112234568899999999999999999999987
No 255
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.9e-38 Score=367.83 Aligned_cols=250 Identities=24% Similarity=0.307 Sum_probs=206.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCC--cccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSD--IIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
+.|+..+.||+|+||.||+|++..+++.||||++.... .....+.+..|..++..+ +||+|+++++++.+.+..++|
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 34667779999999999999999899999999996532 123456788999999988 799999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||+++|+|.++++.. ..+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++...
T Consensus 421 ~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999875 3589999999999999999999999 99999999999999999999999999998643
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVD 790 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 790 (843)
... .......||+.|+|||++ ....++.++|||||||++|||++|+.||..... . +..+.... ..
T Consensus 494 ~~~--~~~~~~~GT~~Y~APE~l-~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-~----~~~~~i~~-~~------ 558 (674)
T 3pfq_A 494 WDG--VTTKTFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-D----ELFQSIME-HN------ 558 (674)
T ss_dssp CTT--CCBCCCCSCSSSCCHHHH-TCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-H----HHHHHHHS-SC------
T ss_pred cCC--cccccccCCCcccCHhhh-cCCCCCccceEechHHHHHHHHcCCCCCCCCCH-H----HHHHHHHh-CC------
Confidence 222 223556899999999988 566789999999999999999999999975322 1 11111111 11
Q ss_pred CCCCCCChhhHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003156 791 PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSM-----AEVVQI 828 (843)
Q Consensus 791 ~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~-----~evl~~ 828 (843)
..++.....++.+++.+|++.||++||++ +|++++
T Consensus 559 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 559 ---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ---CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ---CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 12345566788999999999999999997 777664
No 256
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.8e-38 Score=347.31 Aligned_cols=272 Identities=23% Similarity=0.295 Sum_probs=188.6
Q ss_pred hhhhh-cCeeccccceEEEEEEEC--CCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEc--CCeeE
Q 003156 554 TLLEK-AAEVGEGVFGTVYKVSFG--TQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWT--PQLKL 628 (843)
Q Consensus 554 ~~~~~-~~~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~ 628 (843)
+.|+. +++||+|+||.||+|++. .+++.||+|++.... ....+.+|+.++++++||||+++++++.. ....+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 34444 457999999999999975 468899999985433 34678899999999999999999999954 66789
Q ss_pred EEEEeCCCCCHHHHHhhcC-----CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE----cCCCCcE
Q 003156 629 LVSDYAPNGSLQAKLHERL-----PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL----DDNYNPR 699 (843)
Q Consensus 629 lV~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~k 699 (843)
+||||++ |+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEE
Confidence 9999996 58888876431 1223589999999999999999999999 99999999999999 6789999
Q ss_pred EeeccCccccccccc-ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCc--------hh
Q 003156 700 ISDFGLARLLTRLDK-HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDN--------VV 770 (843)
Q Consensus 700 l~Dfgl~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~--------~~ 770 (843)
|+|||+++.+..... ........||+.|+|||++.....++.++|||||||++|||++|+.||.....+ ..
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 999999987653221 122245678999999998865566899999999999999999999999654321 11
Q ss_pred hHHHHHHHHHhhCCcccccCCCCCC---------------------------CChhhHHHHHHHHHHccCCCCCCCCCHH
Q 003156 771 ILSEHVRVLLEEGNVLDCVDPSMGD---------------------------YPEDEVLPVLKLALVCTCHIPSSRPSMA 823 (843)
Q Consensus 771 ~l~~~~~~~~~~~~~~~~~d~~l~~---------------------------~~~~~~~~l~~l~~~c~~~~P~~RPs~~ 823 (843)
.+...+... +.......+.+.. ........+.+|+.+|++.||++|||++
T Consensus 253 ~l~~i~~~~---g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~ 329 (405)
T 3rgf_A 253 QLDRIFNVM---GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE 329 (405)
T ss_dssp HHHHHHHHH---CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHHHHHhh---CCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 222221111 0000000000000 0001134678999999999999999999
Q ss_pred HHHHHHHhccCC
Q 003156 824 EVVQILQVIKTP 835 (843)
Q Consensus 824 evl~~L~~~~~~ 835 (843)
|++++=.-...+
T Consensus 330 e~L~hp~f~~~~ 341 (405)
T 3rgf_A 330 QAMQDPYFLEDP 341 (405)
T ss_dssp HHHTSGGGTSSS
T ss_pred HHhcChhhccCC
Confidence 999985443333
No 257
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=9.8e-38 Score=342.50 Aligned_cols=259 Identities=21% Similarity=0.270 Sum_probs=197.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCee-----
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLK----- 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----- 627 (843)
+.|...+.||+|+||.||+|.+..+|+.||||++...... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 4566778999999999999999989999999998654322 2246788999999999999999999999877654
Q ss_pred -EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 628 -LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 628 -~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
++||||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 122 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred EEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 99999997 688877743 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhC---
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEG--- 783 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~--- 783 (843)
+..... .....||..|+|||++.....++.++|||||||++|||++|+.||..... ...+....+......
T Consensus 192 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~ 265 (371)
T 4exu_A 192 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEF 265 (371)
T ss_dssp -------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCHHH
T ss_pred cccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCcHHH
Confidence 865432 13456799999999885557789999999999999999999999975321 122222111100000
Q ss_pred --C---------cccccCCCC---CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 784 --N---------VLDCVDPSM---GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 784 --~---------~~~~~d~~l---~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
. ......... ..........+.+++.+|++.||++|||++|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 000000000 01123345678999999999999999999999987
No 258
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-36 Score=336.98 Aligned_cols=334 Identities=18% Similarity=0.175 Sum_probs=246.2
Q ss_pred CccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEE
Q 003156 78 LKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFIS 157 (843)
Q Consensus 78 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 157 (843)
++++++|++++|.+....+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45666666666666655555566666666666666666666666666666666666666666666666666666666777
Q ss_pred eecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhc-cCcceeeccCCccee
Q 003156 158 VSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFD-LGLEEIDLSENGFMG 236 (843)
Q Consensus 158 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~L~~L~l~~n~l~~ 236 (843)
|++|+++...+..|.++++|++|+|++|.+++..+..+..+++|+.|++++|.+++. + +.. .+|+.|++++|.+.+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~--~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-C--GGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-c--cccccccceeecccccccc
Confidence 766666644444456666777777777776666666666667777777777766632 2 111 256667777776653
Q ss_pred cCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccC
Q 003156 237 SIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSI 316 (843)
Q Consensus 237 ~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 316 (843)
. ...++|+.|++++|.+... |.. .+++|++|++++|.+++. ..+..+++|++|++++|.+++..
T Consensus 201 ~-----------~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~ 264 (390)
T 3o6n_A 201 L-----------AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIM 264 (390)
T ss_dssp E-----------ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEE
T ss_pred c-----------CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcC
Confidence 2 1235789999999998854 333 347899999999999864 57888999999999999999888
Q ss_pred CccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhccc
Q 003156 317 PQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLA 396 (843)
Q Consensus 317 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 396 (843)
|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++. | +..++
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~ 339 (390)
T 3o6n_A 265 YHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHH 339 (390)
T ss_dssp SGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTC
T ss_pred hhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhc
Confidence 999999999999999999998 46777788999999999999998 6787888999999999999999854 3 67788
Q ss_pred ccceEeeccccceecCCCCCCCCCCCCCCcCCCCCCCCCC
Q 003156 397 SLLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGICSPL 436 (843)
Q Consensus 397 ~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 436 (843)
+|+.|++++|++.+... ...+..+....+.+++..|..+
T Consensus 340 ~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 340 TLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCSCCCTT
T ss_pred cCCEEEcCCCCccchhH-HHHHHHHHhhcccccCceeccc
Confidence 99999999999987543 2445666777788888888754
No 259
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.1e-37 Score=331.93 Aligned_cols=266 Identities=24% Similarity=0.301 Sum_probs=203.5
Q ss_pred hhhhhhhcCeeccccceEEEEEEEC-CCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhc---cCCCccceeeEEE----
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFG-TQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKA---RHPNLISLEGYYW---- 622 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~---- 622 (843)
..+.|+..+.||+|+||.||+|.+. .+|+.||+|++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3456778889999999999999994 5789999999865432 22234677888887777 8999999999997
Q ss_pred -cCCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEe
Q 003156 623 -TPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRIS 701 (843)
Q Consensus 623 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 701 (843)
.....++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4557899999997 69999998752 34589999999999999999999998 99999999999999999999999
Q ss_pred eccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHh
Q 003156 702 DFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLE 781 (843)
Q Consensus 702 Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~ 781 (843)
|||+++...... ......||..|+|||++ ....++.++|||||||++|||++|+.||..... ...+...+.....
T Consensus 163 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~ 237 (326)
T 1blx_A 163 DFGLARIYSFQM---ALTSVVVTLWYRAPEVL-LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGL 237 (326)
T ss_dssp SCCSCCCCCGGG---GGCCCCCCCTTCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCC
T ss_pred cCcccccccCCC---CccccccccceeCHHHH-hcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHHHcCC
Confidence 999998664322 12445788999999988 555789999999999999999999999975432 2222222211100
Q ss_pred h---CCcc------ccc----CCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 782 E---GNVL------DCV----DPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 782 ~---~~~~------~~~----d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
. .+.. ... ..............+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 0000 000 001111334456678899999999999999999999975
No 260
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1e-37 Score=341.79 Aligned_cols=262 Identities=22% Similarity=0.265 Sum_probs=193.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccC----------hHHHHHHHHHHHhccCCCccceeeEEEc
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQY----------PEDFEREVRVLGKARHPNLISLEGYYWT 623 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~h~niv~l~g~~~~ 623 (843)
+.|+..+.||+|+||.||+|... +|+.||||++........ .+.+.+|+.++++++||||+++++++..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred cceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 34666779999999999999986 599999999855332211 2678999999999999999999999854
Q ss_pred C-----CeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCc
Q 003156 624 P-----QLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNP 698 (843)
Q Consensus 624 ~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 698 (843)
. ...++||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 173 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDI 173 (362)
T ss_dssp CCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred ccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCE
Confidence 2 35799999997 6888888754 35689999999999999999999999 99999999999999999999
Q ss_pred EEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHH
Q 003156 699 RISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRV 778 (843)
Q Consensus 699 kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~ 778 (843)
||+|||+++....... .....+|..|+|||++.....++.++||||+||++|||++|+.||..... ...+...+..
T Consensus 174 kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~ 249 (362)
T 3pg1_A 174 TICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF-YNQLNKIVEV 249 (362)
T ss_dssp EECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHH
T ss_pred EEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHH
Confidence 9999999975443221 23457889999999885556789999999999999999999999975422 1112111110
Q ss_pred HHhhCCc-----------ccccCCCCCC--------CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 779 LLEEGNV-----------LDCVDPSMGD--------YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 779 ~~~~~~~-----------~~~~d~~l~~--------~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...... .+.+...... ........+.+++.+|++.||++|||+.|++++
T Consensus 250 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 250 -VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp -HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000 0000001111 123345568899999999999999999999986
No 261
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.5e-37 Score=325.09 Aligned_cols=254 Identities=24% Similarity=0.316 Sum_probs=204.8
Q ss_pred hhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEE
Q 003156 552 PETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 552 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV 630 (843)
..+.|+..+.||+|+||.||+|....+++.||+|.+..... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 34567778899999999999999988899999999865432 33567899999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC---CCcEEeeccCcc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN---YNPRISDFGLAR 707 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgl~~ 707 (843)
|||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 9999999999998775 3589999999999999999999998 99999999999999754 479999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
....... .....++..|+|||.+. + .++.++||||||+++|+|++|+.||..... .. .... +..+....
T Consensus 173 ~~~~~~~---~~~~~~~~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~---~~~~-~~~~~~~~ 241 (287)
T 2wei_A 173 CFQQNTK---MKDRIGTAYYIAPEVLR-G-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YD---ILKR-VETGKYAF 241 (287)
T ss_dssp TBCCCSS---CSCHHHHHTTCCHHHHT-T-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HHHH-HHHCCCCC
T ss_pred eecCCCc---cccccCcccccChHHhc-C-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HH---HHHH-HHcCCCCC
Confidence 6653322 13345788999999873 3 489999999999999999999999965322 11 1111 12221110
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. ......+.++.+++.+||+.||++|||+.|++++
T Consensus 242 ----~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 ----DL-PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp ----CS-GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----Cc-hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 00 0112345578899999999999999999999985
No 262
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=335.52 Aligned_cols=260 Identities=21% Similarity=0.334 Sum_probs=198.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-ccChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-IQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+.. .||+|.+..... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 446778899999999999999852 499999865432 2234567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRL 712 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 712 (843)
|+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 110 LCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred cccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 99999999999864 34689999999999999999999998 999999999999998 679999999998765322
Q ss_pred cc---ceeccccccccccCCcccccC--------cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHh
Q 003156 713 DK---HVMSNRFQSALGYVAPELTCQ--------SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLE 781 (843)
Q Consensus 713 ~~---~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~ 781 (843)
.. ........|+..|+|||++.. ...++.++|||||||++|||++|+.||....... . ... +.
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~---~~~-~~ 256 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--I---IWQ-MG 256 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--H---HHH-HH
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--H---HHH-hc
Confidence 11 111234468899999998743 2357889999999999999999999997543211 1 111 11
Q ss_pred hCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCCC
Q 003156 782 EGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPL 836 (843)
Q Consensus 782 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~~ 836 (843)
.+.. +... ....+.++.+++.+||..||++|||+.|+++.|+.+....
T Consensus 257 ~~~~-----~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 257 TGMK-----PNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TTCC-----CCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred cCCC-----CCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111 1111 1123345889999999999999999999999999987653
No 263
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.5e-37 Score=345.13 Aligned_cols=263 Identities=21% Similarity=0.240 Sum_probs=201.6
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc--------CCCccceeeEEE--
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR--------HPNLISLEGYYW-- 622 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~g~~~-- 622 (843)
.+.|+..+.||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 356778889999999999999998899999999985432 23467889999999996 788999999987
Q ss_pred --cCCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCC----
Q 003156 623 --TPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNY---- 696 (843)
Q Consensus 623 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---- 696 (843)
.....++||||+ +|++.+++... ....+++..+..++.|++.||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 455789999999 66777776654 2346899999999999999999999864 899999999999999775
Q ss_pred ---------------------------------------------CcEEeeccCcccccccccceeccccccccccCCcc
Q 003156 697 ---------------------------------------------NPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPE 731 (843)
Q Consensus 697 ---------------------------------------------~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE 731 (843)
.+||+|||+++..... .....||..|+|||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE 263 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCCh
Confidence 8999999999866432 13457899999999
Q ss_pred cccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCch-----hhHHHHHHHH-------HhhCC-cccccCCC------
Q 003156 732 LTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNV-----VILSEHVRVL-------LEEGN-VLDCVDPS------ 792 (843)
Q Consensus 732 ~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~-----~~l~~~~~~~-------~~~~~-~~~~~d~~------ 792 (843)
++ .+..++.++|||||||++|||+||+.||....... ..+....+.. +..+. ....+...
T Consensus 264 ~~-~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1wak_A 264 VL-IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHI 342 (397)
T ss_dssp HH-HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSC
T ss_pred hh-cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccc
Confidence 88 45568999999999999999999999997543221 1111111100 00000 00000000
Q ss_pred --------------CCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 793 --------------MGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 793 --------------l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
....+......+.+++.+||+.||++|||++|++++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 343 TKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 012345667789999999999999999999999975
No 264
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4e-38 Score=338.41 Aligned_cols=244 Identities=23% Similarity=0.341 Sum_probs=201.3
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-----ChHHHHHHHHHHHhcc--CCCccceeeEEEcCC
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-----YPEDFEREVRVLGKAR--HPNLISLEGYYWTPQ 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~ 625 (843)
.+.|+..+.||+|+||.||+|.+..+++.||||.+....... ..+.+.+|+.++++++ ||||+++++++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 345777889999999999999998899999999996553221 2345778999999996 599999999999999
Q ss_pred eeEEEEEeCCC-CCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc-CCCCcEEeec
Q 003156 626 LKLLVSDYAPN-GSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD-DNYNPRISDF 703 (843)
Q Consensus 626 ~~~lV~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Df 703 (843)
..++|+||+.+ ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+||+||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999976 8999999875 4689999999999999999999998 999999999999999 7899999999
Q ss_pred cCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhC
Q 003156 704 GLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEG 783 (843)
Q Consensus 704 gl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 783 (843)
|+++...... .....||..|+|||++......+.++|||||||++|||++|+.||.... . ... +
T Consensus 195 g~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~----~~~-~ 258 (320)
T 3a99_A 195 GSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------E----IIR-G 258 (320)
T ss_dssp TTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H----HHH-C
T ss_pred cccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------h----hhc-c
Confidence 9998765322 1345689999999988444445788999999999999999999996421 0 011 1
Q ss_pred CcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 784 NVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 784 ~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. .++.....++.+++.+||+.||++|||++|++++
T Consensus 259 ~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 259 QV---------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc---------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10 1223345678899999999999999999999885
No 265
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=335.83 Aligned_cols=259 Identities=21% Similarity=0.259 Sum_probs=198.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEcCCe------
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWTPQL------ 626 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------ 626 (843)
..|+..+.||+|+||.||+|.+..+|+.||||++...... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 3466677899999999999999889999999998654322 224578899999999999999999999987654
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCc
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLA 706 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 706 (843)
.++||||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 688776643 389999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhh----
Q 003156 707 RLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEE---- 782 (843)
Q Consensus 707 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~---- 782 (843)
+..... .....+|..|+|||++.....++.++|||||||++|||++|+.||..... ...+....+.....
T Consensus 174 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~ 247 (353)
T 3coi_A 174 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEF 247 (353)
T ss_dssp TC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-HHHHHHHHHHHCBCCHHH
T ss_pred cCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHH
Confidence 865421 13456789999999885556789999999999999999999999975432 11222211110000
Q ss_pred -------------CCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 783 -------------GNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 783 -------------~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
........+............+.+++.+|++.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000001111222334556788999999999999999999999986
No 266
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.4e-37 Score=334.48 Aligned_cols=256 Identities=18% Similarity=0.268 Sum_probs=175.7
Q ss_pred hhhhhhhc-CeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEc----CCe
Q 003156 552 PETLLEKA-AEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWT----PQL 626 (843)
Q Consensus 552 ~~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~ 626 (843)
..+.|+.. +.||+|+||.||+|.+..+|+.||||++... .....+....++.++||||+++++++.. ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 34456663 4699999999999999989999999998542 2222333344566799999999999976 345
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC---CCCcEEeec
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---NYNPRISDF 703 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 703 (843)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 789999999999999998752 34699999999999999999999999 9999999999999985 455999999
Q ss_pred cCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhC
Q 003156 704 GLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEG 783 (843)
Q Consensus 704 gl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~ 783 (843)
|+++...... .....+|+.|+|||++ ....++.++|||||||++|||++|+.||......... ......+..+
T Consensus 176 g~~~~~~~~~----~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~ 248 (336)
T 3fhr_A 176 GFAKETTQNA----LQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGMKRRIRLG 248 (336)
T ss_dssp TTCEEC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------
T ss_pred ccceeccccc----cccCCCCcCccChhhh-CCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhHHHhhhcc
Confidence 9998654322 1345678999999988 5567889999999999999999999999654322110 0000000000
Q ss_pred CcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 784 NVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 784 ~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
.. ... ..........+.+++.+||+.||++|||+.|++++-
T Consensus 249 ~~-~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 249 QY-GFP----NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp ---CCC----TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred cc-ccC----chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00 000 011234556788999999999999999999999864
No 267
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.3e-37 Score=335.79 Aligned_cols=259 Identities=23% Similarity=0.334 Sum_probs=182.3
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHH-HHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVR-VLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||++...........+..|+. +++.++||||+++++++..++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 446677799999999999999988999999999976543333445666666 6777799999999999999999999999
Q ss_pred eCCCCCHHHHHhhcC-CCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 633 YAPNGSLQAKLHERL-PSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
|+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9975 8888776421 12456899999999999999999999852 799999999999999999999999999987643
Q ss_pred cccceeccccccccccCCccccc---CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccc
Q 003156 712 LDKHVMSNRFQSALGYVAPELTC---QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDC 788 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 788 (843)
... .....||..|+|||++. ....++.++|||||||++|||++|+.||.........+ ......
T Consensus 179 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----------~~~~~~ 245 (327)
T 3aln_A 179 SIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL----------TQVVKG 245 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------CCCCCS
T ss_pred ccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH----------HHHhcC
Confidence 221 13346889999999873 34468899999999999999999999997532211000 011111
Q ss_pred cCCCCCC-CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 789 VDPSMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 789 ~d~~l~~-~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
..+.+.. ........+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 246 DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 1111111 223456678999999999999999999999874
No 268
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.4e-37 Score=330.44 Aligned_cols=255 Identities=19% Similarity=0.316 Sum_probs=196.6
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-cChHHHHHHHHHHHhcc--CCCccceeeEEEcCCeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-QYPEDFEREVRVLGKAR--HPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~lV 630 (843)
..|+..+.||+|+||.||+|.+. +++.||||.+...... ...+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 44677789999999999999986 6899999998654322 23467899999999997 59999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|| +.+|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++...
T Consensus 107 ~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred Ee-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 99 5688999999875 4689999999999999999999998 9999999999999975 899999999998765
Q ss_pred ccccceeccccccccccCCcccccC----------cCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHH
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQ----------SLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLL 780 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~----------~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~ 780 (843)
............|+..|+|||.+.. ...++.++|||||||++|||++|+.||.........+ ....
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~----~~~~ 253 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----HAII 253 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH----HHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH----HHHH
Confidence 4433333345578999999998743 1467889999999999999999999997543322111 1111
Q ss_pred hhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHH
Q 003156 781 EEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 830 (843)
Q Consensus 781 ~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~ 830 (843)
..... ..++.....++.+++.+||+.||++|||+.|++++-.
T Consensus 254 ~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 254 DPNHE--------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp CTTSC--------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred hcccc--------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 11110 1123334567889999999999999999999998743
No 269
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.9e-36 Score=353.53 Aligned_cols=335 Identities=18% Similarity=0.166 Sum_probs=266.3
Q ss_pred CccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEE
Q 003156 78 LKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFIS 157 (843)
Q Consensus 78 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 157 (843)
+.+++.|++++|.+...++..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56677777777777766666677777777777777777777777777777777777777777777777777777777777
Q ss_pred eecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceec
Q 003156 158 VSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGS 237 (843)
Q Consensus 158 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~ 237 (843)
|++|++++..+..|+++++|++|+|++|.+++..|..|..+++|+.|+|++|.+++. +.. ...+|+.|++++|.+.+.
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~-~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLS-LIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-CGG-GCTTCSEEECCSSCCSEE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-Chh-hhhhhhhhhcccCccccc
Confidence 777777765555667777788888877777777777777777788888887777743 211 112577778887777643
Q ss_pred CCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCC
Q 003156 238 IPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIP 317 (843)
Q Consensus 238 ~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 317 (843)
. ...+|+.|++++|.+....+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|
T Consensus 208 ~-----------~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~ 271 (597)
T 3oja_B 208 A-----------IPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMY 271 (597)
T ss_dssp E-----------CCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEES
T ss_pred c-----------CCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCH
Confidence 1 2357999999999998554432 3689999999999986 4678899999999999999999999
Q ss_pred ccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccc
Q 003156 318 QEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLAS 397 (843)
Q Consensus 318 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 397 (843)
..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|+|++. | +..+++
T Consensus 272 ~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~ 346 (597)
T 3oja_B 272 HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHT 346 (597)
T ss_dssp GGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCC
T ss_pred HHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCC
Confidence 999999999999999999995 6777888999999999999999 6888899999999999999999855 3 667889
Q ss_pred cceEeeccccceecCCCCCCCCCCCCCCcCCCCCCCCCC
Q 003156 398 LLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGICSPL 436 (843)
Q Consensus 398 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 436 (843)
|+.|++++|++++..+ ...+..+....+.++...|+.+
T Consensus 347 L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 347 LKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCCCCCTT
T ss_pred CCEEEeeCCCCCChhH-HHHHHHHhhhccccccccCCcc
Confidence 9999999999998754 3456777778889999999864
No 270
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=332.77 Aligned_cols=265 Identities=19% Similarity=0.262 Sum_probs=194.9
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEE----------
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYW---------- 622 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~---------- 622 (843)
.+.|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 345677789999999999999998889999999986543 233567889999999999999999999874
Q ss_pred ----cCCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc-CCCC
Q 003156 623 ----TPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD-DNYN 697 (843)
Q Consensus 623 ----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~ 697 (843)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCe
Confidence 3357799999997 699999865 3588999999999999999999998 999999999999997 6779
Q ss_pred cEEeeccCccccccccc-ceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHH
Q 003156 698 PRISDFGLARLLTRLDK-HVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHV 776 (843)
Q Consensus 698 ~kl~Dfgl~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~ 776 (843)
+||+|||+++....... ........++..|+|||.+.....++.++|||||||++|||++|+.||..... ...+....
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~~~ 238 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE-LEQMQLIL 238 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHH
Confidence 99999999987643211 11123445688899999875656789999999999999999999999975432 11111111
Q ss_pred HH-----------HHhhCCc---ccccCCCC--CCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 777 RV-----------LLEEGNV---LDCVDPSM--GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 777 ~~-----------~~~~~~~---~~~~d~~l--~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. ....-.. .....+.. .........++.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 10 0000000 00000000 01123345678999999999999999999999986
No 271
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.8e-37 Score=332.07 Aligned_cols=264 Identities=22% Similarity=0.289 Sum_probs=204.2
Q ss_pred hhhhhcCeeccccceEEEEEEE-CCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCC------ccceeeEEEcCCe
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSF-GTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPN------LISLEGYYWTPQL 626 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~~ 626 (843)
+.|+..+.||+|+||.||+|.+ ..+++.||||.+.... ...+.+.+|+++++.++|++ ++++++++...+.
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 4577788999999999999998 5578999999985432 23467889999999997654 9999999999999
Q ss_pred eEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC------------
Q 003156 627 KLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD------------ 694 (843)
Q Consensus 627 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~------------ 694 (843)
.++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 899999998752 34688999999999999999999998 9999999999999987
Q ss_pred -------CCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCC
Q 003156 695 -------NYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGED 767 (843)
Q Consensus 695 -------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~ 767 (843)
++.+||+|||+++..... .....||..|+|||++ .+..++.++|||||||++|||++|+.||.....
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVI-LALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHH-TTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred cccccccCCCceEeeCcccccCccc-----cccccCCccccChHHh-hCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 678999999999864432 1345789999999988 556789999999999999999999999975422
Q ss_pred chhhHHHHHHHHHhh--------CCccccc---------------------CC--CCCCCChhhHHHHHHHHHHccCCCC
Q 003156 768 NVVILSEHVRVLLEE--------GNVLDCV---------------------DP--SMGDYPEDEVLPVLKLALVCTCHIP 816 (843)
Q Consensus 768 ~~~~l~~~~~~~~~~--------~~~~~~~---------------------d~--~l~~~~~~~~~~l~~l~~~c~~~~P 816 (843)
..... .+...... ....... .+ ...........++.+++.+||+.||
T Consensus 240 -~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 240 -KEHLA-MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp -HHHHH-HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred -HHHHH-HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 11111 11111110 0000000 00 0001234556789999999999999
Q ss_pred CCCCCHHHHHHH--HHhcc
Q 003156 817 SSRPSMAEVVQI--LQVIK 833 (843)
Q Consensus 817 ~~RPs~~evl~~--L~~~~ 833 (843)
++|||++|++++ ++.++
T Consensus 318 ~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 318 AKRITLREALKHPFFDLLK 336 (339)
T ss_dssp TTSCCHHHHTTSGGGGGGG
T ss_pred ccccCHHHHhcCHHHHHHh
Confidence 999999999976 44443
No 272
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-38 Score=335.02 Aligned_cols=244 Identities=25% Similarity=0.360 Sum_probs=194.4
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-----ChHHHHHHHHHHHhc----cCCCccceeeEEEc
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-----YPEDFEREVRVLGKA----RHPNLISLEGYYWT 623 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l----~h~niv~l~g~~~~ 623 (843)
.+.|+..+.||+|+||.||+|.+..+++.||||.+....... ....+.+|+.+++++ +||||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 345677889999999999999998899999999986543221 223456799999999 89999999999999
Q ss_pred CCeeEEEEEe-CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc-CCCCcEEe
Q 003156 624 PQLKLLVSDY-APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD-DNYNPRIS 701 (843)
Q Consensus 624 ~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 701 (843)
.+..++|+|| +++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.+||+
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEK----GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred CCeEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEE
Confidence 8999999999 7899999999875 3589999999999999999999999 999999999999999 88999999
Q ss_pred eccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHh
Q 003156 702 DFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLE 781 (843)
Q Consensus 702 Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~ 781 (843)
|||+++....... ....|+..|+|||++......+.++|||||||++|||++|+.||.... . ...
T Consensus 183 dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~----~~~ 247 (312)
T 2iwi_A 183 DFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------E----ILE 247 (312)
T ss_dssp CCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H----HHH
T ss_pred EcchhhhcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------H----Hhh
Confidence 9999987654221 345688999999987444444568999999999999999999996321 0 011
Q ss_pred hCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 782 EGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 782 ~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.. ..++.....++.+++.+||+.||++|||++|++++
T Consensus 248 -~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 -AE---------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -TC---------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -hc---------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10 11234455678899999999999999999999986
No 273
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=328.98 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=182.9
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChH-HHHHHHHHHHhccCCCccceeeEEEcCCeeEEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPE-DFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~-~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e 632 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||.+.......... .+.++..+++.++||||+++++++.+++..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 44667779999999999999998889999999997654332223 34455566788899999999999999999999999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhh-cCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHH-SFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
|+ ++.+..+.... ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 105 LM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred cc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99 45555555443 3468999999999999999999998 5 899999999999999999999999999976543
Q ss_pred cccceeccccccccccCCccccc----CcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 712 LDKHVMSNRFQSALGYVAPELTC----QSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
... .....++..|+|||++. ....++.++|||||||++|||++|+.||.........+. .......
T Consensus 178 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~~~~~--- 247 (318)
T 2dyl_A 178 DKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT----KVLQEEP--- 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH----HHHHSCC---
T ss_pred Ccc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHH----HHhccCC---
Confidence 221 23456889999999874 244678999999999999999999999976433322222 1122111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
+..+ .......++.+++.+||+.||++|||++|++++
T Consensus 248 ---~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 ---PLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---CCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---CCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1111 112345578899999999999999999999875
No 274
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.1e-37 Score=342.85 Aligned_cols=258 Identities=25% Similarity=0.296 Sum_probs=189.9
Q ss_pred ChhhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEE
Q 003156 551 DPETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLL 629 (843)
Q Consensus 551 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l 629 (843)
...+.+...+.||+|+||+||.+... +|+.||||++.... .+.+.+|+.+++++ +||||+++++++.+.+..++
T Consensus 12 ~l~~~~~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~l 86 (434)
T 2rio_A 12 SLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86 (434)
T ss_dssp SCSSCEEEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred hhhheeeccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEE
Confidence 34455556678999999999865443 79999999986432 45678999999987 89999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhcCCCCCC---CChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCC-----------
Q 003156 630 VSDYAPNGSLQAKLHERLPSTPP---LSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDN----------- 695 (843)
Q Consensus 630 V~e~~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~----------- 695 (843)
||||++ |+|.+++......... .++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999995 6999999875322221 24456788999999999999998 99999999999999754
Q ss_pred --CCcEEeeccCcccccccccce--eccccccccccCCcccccC------cCCCCCchhHHHHHHHHHHHHh-CCCCCcC
Q 003156 696 --YNPRISDFGLARLLTRLDKHV--MSNRFQSALGYVAPELTCQ------SLRVNEKCDIYGFGVLILELVT-GRRPVEY 764 (843)
Q Consensus 696 --~~~kl~Dfgl~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~------~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~ 764 (843)
+.+||+|||+++.+....... ......||+.|+|||++.. ...++.++|||||||++|||+| |+.||..
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 479999999998765432211 1234578999999998843 2568999999999999999999 9999965
Q ss_pred CCCchhhHHHHHHHHHhhCCcccccCCCCCC-CChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 765 GEDNVVILSEHVRVLLEEGNVLDCVDPSMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 765 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
...... . ........ +.... .......++.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~---~----i~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 243 KYSRES---N----IIRGIFSL----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp TTTHHH---H----HHHTCCCC----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred chhhHH---H----HhcCCCCc----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 432211 1 11111100 11111 234566789999999999999999999999864
No 275
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.5e-35 Score=330.85 Aligned_cols=346 Identities=30% Similarity=0.352 Sum_probs=248.1
Q ss_pred CccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCC
Q 003156 3 NMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLR 82 (843)
Q Consensus 3 ~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~ 82 (843)
++++|++++|+++ .+|.. .++|++|++++|.+++++. .+++|++|++++|++++.+.. .++|+
T Consensus 72 ~l~~L~l~~~~l~-~lp~~----~~~L~~L~l~~n~l~~lp~----~~~~L~~L~l~~n~l~~l~~~--------~~~L~ 134 (454)
T 1jl5_A 72 QAHELELNNLGLS-SLPEL----PPHLESLVASCNSLTELPE----LPQSLKSLLVDNNNLKALSDL--------PPLLE 134 (454)
T ss_dssp TCSEEECTTSCCS-CCCSC----CTTCSEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCCCSC--------CTTCC
T ss_pred CCCEEEecCCccc-cCCCC----cCCCCEEEccCCcCCcccc----ccCCCcEEECCCCccCcccCC--------CCCCC
Confidence 4688888888888 56642 4788899999998888664 247899999999988854321 26899
Q ss_pred EEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCc
Q 003156 83 TLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNT 162 (843)
Q Consensus 83 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 162 (843)
+|++++|++++ +| .|..+++|++|++++|++++ +|..+ ++|++|++++|++++ +| .|..+++|++|++++|+
T Consensus 135 ~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~ 206 (454)
T 1jl5_A 135 YLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNS 206 (454)
T ss_dssp EEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSC
T ss_pred EEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCc
Confidence 99999999985 66 58999999999999999985 45433 589999999999986 45 58899999999999999
Q ss_pred ccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCC
Q 003156 163 LTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGS 242 (843)
Q Consensus 163 l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~ 242 (843)
+++ +|... ++|++|++++|.++ .+| .+..+++|+.|++++|.+++ +|... .+|+.|++++|++.+ +|..
T Consensus 207 l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~N~l~~-l~~~- 275 (454)
T 1jl5_A 207 LKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDLP--PSLEALNVRDNYLTD-LPEL- 275 (454)
T ss_dssp CSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSCC--TTCCEEECCSSCCSC-CCCC-
T ss_pred CCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccccc--cccCEEECCCCcccc-cCcc-
Confidence 985 55433 58999999999998 567 48899999999999999984 55532 479999999999875 4432
Q ss_pred CCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccc
Q 003156 243 SSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCE 322 (843)
Q Consensus 243 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 322 (843)
+++|+.|++++|++++. |.. .++|++|++++|+++++. . ..++|++|++++|++++ +|..
T Consensus 276 --------~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~-~---~~~~L~~L~Ls~N~l~~-lp~~--- 335 (454)
T 1jl5_A 276 --------PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLC-D---LPPSLEELNVSNNKLIE-LPAL--- 335 (454)
T ss_dssp --------CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC-C---CCTTCCEEECCSSCCSC-CCCC---
T ss_pred --------cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCccc-C---CcCcCCEEECCCCcccc-cccc---
Confidence 36899999999999863 322 268999999999998632 1 12589999999999996 6654
Q ss_pred cCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccc--cCCccccCC-------------CCCCEEEccCCcccc-
Q 003156 323 SRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSG--SIPKSISNL-------------NKLKILKLEFNELSG- 386 (843)
Q Consensus 323 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l-------------~~L~~L~L~~N~l~~- 386 (843)
+++|+.|++++|+++ .+|. .+++|+.|++++|++++ .+|.++..| ++|+.|++++|++++
T Consensus 336 ~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~ 411 (454)
T 1jl5_A 336 PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREF 411 (454)
T ss_dssp CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-------------------------
T ss_pred CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCcc
Confidence 589999999999999 4666 57999999999999998 789999888 899999999999997
Q ss_pred -cCCcchhcccccceEeeccccceecCCC
Q 003156 387 -EIPQELGKLASLLAVNVSYNRLIGRLPV 414 (843)
Q Consensus 387 -~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 414 (843)
.+|.. ++.|.+.+|.+.+.+|.
T Consensus 412 ~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 412 PDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp -----------------------------
T ss_pred ccchhh------HhheeCcCcccCCcccc
Confidence 66654 55667888888877663
No 276
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.4e-37 Score=336.25 Aligned_cols=200 Identities=23% Similarity=0.285 Sum_probs=169.1
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CC-----CccceeeEEEcCCee
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HP-----NLISLEGYYWTPQLK 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~g~~~~~~~~ 627 (843)
+.|+..+.||+|+||+||+|.+..+++.||||++.... .....+..|+.+++.++ |+ +|+++++++...+..
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 45777889999999999999998899999999986432 23456778999998885 55 399999999999999
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc--CCCCcEEeeccC
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD--DNYNPRISDFGL 705 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgl 705 (843)
++||||++ |+|.+++.... ...+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|||+
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 99999996 59999998752 24589999999999999999999952 23899999999999995 578899999999
Q ss_pred cccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCC
Q 003156 706 ARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYG 765 (843)
Q Consensus 706 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~ 765 (843)
++..... .....||+.|+|||++ .+..++.++|||||||++|||+||+.||...
T Consensus 208 a~~~~~~-----~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQR-----IYQYIQSRFYRSPEVL-LGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccc-----cccccCCccccChHHH-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876432 1345788999999988 5557899999999999999999999999754
No 277
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=9.4e-36 Score=329.54 Aligned_cols=311 Identities=22% Similarity=0.200 Sum_probs=223.5
Q ss_pred CCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCC
Q 003156 26 CASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYL 105 (843)
Q Consensus 26 l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 105 (843)
+++++.|++++|.+..++...|..+++|++|+|++|.+++.++ ..|..+++|++|+|++|.+.+..|..|..+++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 119 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDT----YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 119 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECT----TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccCh----hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCC
Confidence 4666777777777776666666667777777777776664322 245566666777777666666666666666666
Q ss_pred CEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccC
Q 003156 106 KELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNN 185 (843)
Q Consensus 106 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 185 (843)
++|+|++|+++...+..|..+++|++|++++|.+++..+..|..+++|++|++++|++++. .+..+++|+.|++++|
T Consensus 120 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 120 TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYN 196 (390)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSS
T ss_pred CEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccc
Confidence 6666666666644444456666666666666666665556666666666666666666532 1445556666666666
Q ss_pred CcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccc
Q 003156 186 HLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLV 265 (843)
Q Consensus 186 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~ 265 (843)
.+++ +...++|+.|++++|.+. .. |. ..+++|+.|++++|.++
T Consensus 197 ~l~~-----~~~~~~L~~L~l~~n~l~-----------------------~~-~~--------~~~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 197 LLST-----LAIPIAVEELDASHNSIN-----------------------VV-RG--------PVNVELTILKLQHNNLT 239 (390)
T ss_dssp CCSE-----EECCSSCSEEECCSSCCC-----------------------EE-EC--------CCCSSCCEEECCSSCCC
T ss_pred cccc-----cCCCCcceEEECCCCeee-----------------------ec-cc--------cccccccEEECCCCCCc
Confidence 5552 122234555555555554 22 11 11467999999999998
Q ss_pred eeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhc
Q 003156 266 GDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIR 345 (843)
Q Consensus 266 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 345 (843)
+. ..+..+++|++|++++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+.
T Consensus 240 ~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~ 315 (390)
T 3o6n_A 240 DT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQP 315 (390)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHH
T ss_pred cc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCcccc
Confidence 53 578889999999999999998888899999999999999999984 5667788999999999999999 6777899
Q ss_pred ccCCCcEEecccccccccCCccccCCCCCCEEEccCCccccc
Q 003156 346 NCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGE 387 (843)
Q Consensus 346 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 387 (843)
.+++|+.|+|++|+++. +| +..+++|+.|+|++|+++..
T Consensus 316 ~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 316 QFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp HHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHH
T ss_pred ccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccch
Confidence 99999999999999984 44 77899999999999999864
No 278
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-35 Score=332.94 Aligned_cols=340 Identities=20% Similarity=0.157 Sum_probs=266.2
Q ss_pred hhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhc
Q 003156 22 LFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAA 101 (843)
Q Consensus 22 ~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 101 (843)
.+.++++|++|++++|.|.+++ .|..+++|++|+|++|++++. .+..+++|++|+|++|++++. + +..
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls~n~l~~~-------~~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDMT--GIEKLTGLTKLICTSNNITTL-------DLSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCCT--TGGGCTTCSEEECCSSCCSCC-------CCTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ChhHcCCCCEEEccCCCcccCh--hhcccCCCCEEEccCCcCCeE-------ccccCCCCCEEECcCCCCcee-e--cCC
Confidence 4678899999999999999875 488999999999999998864 267889999999999999864 3 889
Q ss_pred CCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEE
Q 003156 102 LHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLD 181 (843)
Q Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 181 (843)
+++|++|+|++|++++. + ++.+++|++|++++|++++. .++.+++|++|++++|+..+.+ .++.+++|++|+
T Consensus 105 l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 99999999999999864 3 88999999999999999874 3788999999999999655555 478899999999
Q ss_pred cccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCC
Q 003156 182 FSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLS 260 (843)
Q Consensus 182 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~ 260 (843)
+++|++++ +| +..+++|+.|++++|.+++. + +... +|+.|++++|++.+ +| ...+++|+.|+++
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~~L~~L~Ls~N~l~~-ip--------~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNIQLTFLDCSSNKLTE-ID--------VTPLTQLTYFDCS 241 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--------CTTCTTCSEEECC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCCCCCEEECcCCcccc-cC--------ccccCCCCEEEee
Confidence 99999986 44 88889999999999999853 2 3332 57777777777765 33 2235677777777
Q ss_pred CCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCc
Q 003156 261 SNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPI 340 (843)
Q Consensus 261 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 340 (843)
+|++++.. ++.+++|+.|++++|. |+.|++++|.+.+.+| +..+++|+.|++++|...+.+
T Consensus 242 ~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l 302 (457)
T 3bz5_A 242 VNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLL 302 (457)
T ss_dssp SSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEE
T ss_pred CCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCCccccee
Confidence 77777542 3456667777766653 4567888888877776 567899999999999877766
Q ss_pred hh--------hhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecC
Q 003156 341 PQ--------VIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRL 412 (843)
Q Consensus 341 p~--------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 412 (843)
|. .+.++++|+.|+|++|+|++ ++ ++++++|+.|++++|+|++ ++.|..|++++|.++|.
T Consensus 303 ~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~- 370 (457)
T 3bz5_A 303 DCQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE- 370 (457)
T ss_dssp ECTTCCCSCCCCTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-
T ss_pred ccCCCcceEechhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-
Confidence 64 25667889999999999997 33 8889999999999999986 24667778999999887
Q ss_pred CCCCCCCCCCCCCcCCCC
Q 003156 413 PVGGVFPTLDQSSLQGNL 430 (843)
Q Consensus 413 p~~~~~~~~~~~~~~~n~ 430 (843)
| .+..++...+..|.
T Consensus 371 ~---~~~~l~~l~l~~N~ 385 (457)
T 3bz5_A 371 G---QTITMPKETLTNNS 385 (457)
T ss_dssp E---EEEECCCBCCBTTB
T ss_pred c---eeeecCccccccCc
Confidence 2 33445555555554
No 279
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.3e-37 Score=336.58 Aligned_cols=262 Identities=19% Similarity=0.235 Sum_probs=199.5
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-----------CCCccceeeEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-----------HPNLISLEGYYW 622 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~ 622 (843)
..|+..+.||+|+||.||+|.+..+++.||||.+.... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 45777889999999999999998899999999985332 23467889999999886 899999999997
Q ss_pred cCC----eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc-----
Q 003156 623 TPQ----LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD----- 693 (843)
Q Consensus 623 ~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~----- 693 (843)
..+ ..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 644 678999999 899999998752 345899999999999999999999853 899999999999994
Q ss_pred -CCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCc----
Q 003156 694 -DNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDN---- 768 (843)
Q Consensus 694 -~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~---- 768 (843)
..+.+||+|||+++..... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVL-LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp TTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHH-HTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred cCcceEEEcccccccccCCC-----CCCCCCCccccCcHHH-hCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 4457999999999866432 1344789999999988 4556899999999999999999999999754221
Q ss_pred -hhhHHHHHHHHH-------hhCC----------cccccCC-----------CCCCCChhhHHHHHHHHHHccCCCCCCC
Q 003156 769 -VVILSEHVRVLL-------EEGN----------VLDCVDP-----------SMGDYPEDEVLPVLKLALVCTCHIPSSR 819 (843)
Q Consensus 769 -~~~l~~~~~~~~-------~~~~----------~~~~~d~-----------~l~~~~~~~~~~l~~l~~~c~~~~P~~R 819 (843)
...+.......- ..+. ....+.. ....++.....++.+++.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 111111111100 0000 0000000 0012456777889999999999999999
Q ss_pred CCHHHHHHH
Q 003156 820 PSMAEVVQI 828 (843)
Q Consensus 820 Ps~~evl~~ 828 (843)
||++|++++
T Consensus 326 pt~~ell~h 334 (373)
T 1q8y_A 326 ADAGGLVNH 334 (373)
T ss_dssp BCHHHHHTC
T ss_pred CCHHHHhhC
Confidence 999999986
No 280
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.1e-36 Score=326.84 Aligned_cols=260 Identities=21% Similarity=0.277 Sum_probs=199.9
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCC-eEEEEEEeecCCcccChHHHHHHHHHHHhccCCC------ccceeeEEEcCC
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQG-RMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPN------LISLEGYYWTPQ 625 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~ 625 (843)
.+.|+..+.||+|+||.||+|.+..++ +.||+|.+.... ...+.+.+|+.++++++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 355777889999999999999997666 789999985432 23467889999999998766 899999999999
Q ss_pred eeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEE-------------
Q 003156 626 LKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILL------------- 692 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill------------- 692 (843)
..++||||+ +|++.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred eEEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 999999999 677878777642 34689999999999999999999998 99999999999999
Q ss_pred ------cCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCC
Q 003156 693 ------DDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGE 766 (843)
Q Consensus 693 ------~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~ 766 (843)
+.++.+||+|||+++...... ....||..|+|||++ .+..++.++|||||||++|||++|+.||....
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVI-LELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeee-ecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 568899999999998643321 345789999999988 55678999999999999999999999997543
Q ss_pred CchhhHHHHHHHHHhh--------CCccccc-C-----C-----------------CCCCCChhhHHHHHHHHHHccCCC
Q 003156 767 DNVVILSEHVRVLLEE--------GNVLDCV-D-----P-----------------SMGDYPEDEVLPVLKLALVCTCHI 815 (843)
Q Consensus 767 ~~~~~l~~~~~~~~~~--------~~~~~~~-d-----~-----------------~l~~~~~~~~~~l~~l~~~c~~~~ 815 (843)
.. ..+. .+...... ....... . + ...........++.+++.+||+.|
T Consensus 244 ~~-~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 321 (355)
T 2eu9_A 244 NR-EHLV-MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321 (355)
T ss_dssp HH-HHHH-HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred HH-HHHH-HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence 21 1111 11111100 0000000 0 0 000112344567899999999999
Q ss_pred CCCCCCHHHHHHH
Q 003156 816 PSSRPSMAEVVQI 828 (843)
Q Consensus 816 P~~RPs~~evl~~ 828 (843)
|++|||++|++++
T Consensus 322 P~~Rpt~~e~l~h 334 (355)
T 2eu9_A 322 PAQRITLAEALLH 334 (355)
T ss_dssp TTTSCCHHHHTTS
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999875
No 281
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=336.91 Aligned_cols=250 Identities=24% Similarity=0.335 Sum_probs=185.6
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEEEEe
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLVSDY 633 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~ 633 (843)
.|+..+.||+|+||+||.... .+|+.||||++..... ..+.+|+++++++ +|||||++++++.+....++||||
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 355667899999999654333 3789999999854332 3356899999999 799999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC-----CCCcEEeeccCccc
Q 003156 634 APNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD-----NYNPRISDFGLARL 708 (843)
Q Consensus 634 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfgl~~~ 708 (843)
++ |+|.+++.... ....+..++.++.|+++||+|||+. +|+||||||+||+++. ...+||+|||+++.
T Consensus 100 ~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 96 69999998752 3355566789999999999999998 9999999999999953 34688999999987
Q ss_pred cccccc-ceeccccccccccCCcccccC--cCCCCCchhHHHHHHHHHHHHh-CCCCCcCCCCchhhHHHHHHHHHhhCC
Q 003156 709 LTRLDK-HVMSNRFQSALGYVAPELTCQ--SLRVNEKCDIYGFGVLILELVT-GRRPVEYGEDNVVILSEHVRVLLEEGN 784 (843)
Q Consensus 709 ~~~~~~-~~~~~~~~g~~~y~aPE~~~~--~~~~~~~~Dv~S~Gvil~ellt-g~~p~~~~~~~~~~l~~~~~~~~~~~~ 784 (843)
...... ........||+.|+|||++.. ...++.++|||||||++|||++ |..||....... .... ....
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~------~~~~-~~~~ 245 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ------ANIL-LGAC 245 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH------HHHH-TTCC
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH------HHHH-hccC
Confidence 654321 122245678999999998843 4567889999999999999999 999986432211 1111 1111
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 785 VLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 785 ~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
.... ..........+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 246 SLDC-----LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp CCTT-----SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred Cccc-----cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 1111 11233445567899999999999999999999853
No 282
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6.8e-37 Score=350.77 Aligned_cols=271 Identities=25% Similarity=0.294 Sum_probs=203.8
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEc------CCee
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWT------PQLK 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~~~ 627 (843)
+.|+..+.||+|+||.||+|.+..+|+.||||++.........+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 5577888999999999999999888999999998654433445678999999999999999999998765 5667
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCC---cEEeecc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYN---PRISDFG 704 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 704 (843)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 99999999999999998753 234689999999999999999999998 9999999999999997665 9999999
Q ss_pred CcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHH-HHHhhC
Q 003156 705 LARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVR-VLLEEG 783 (843)
Q Consensus 705 l~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~-~~~~~~ 783 (843)
+++....... .....||..|+|||.+ .+..++.++|||||||++|||++|+.||........ +...+. ......
T Consensus 170 ~a~~~~~~~~---~~~~~gt~~Y~APE~l-~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~-~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 170 YAKELDQGEL---CTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ-WHGKVREKSNEHI 244 (676)
T ss_dssp CCCBTTSCCC---CCCCCSCCTTCSSCSS-CCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHH-SSTTCC------C
T ss_pred cccccccccc---cccccCCcccCChHHh-ccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhh-hhhhhhcccchhh
Confidence 9987654322 2446789999999988 566789999999999999999999999965321100 000000 000000
Q ss_pred Cccccc------C---CCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHhcc
Q 003156 784 NVLDCV------D---PSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAE-----VVQILQVIK 833 (843)
Q Consensus 784 ~~~~~~------d---~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~e-----vl~~L~~~~ 833 (843)
...+.. . +............+.+++.+|+..||++|||++| +.+.++.+.
T Consensus 245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 000000 0 1111244567888999999999999999999988 445555543
No 283
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.6e-35 Score=317.03 Aligned_cols=307 Identities=21% Similarity=0.315 Sum_probs=216.4
Q ss_pred hhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcC
Q 003156 23 FENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAAL 102 (843)
Q Consensus 23 f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 102 (843)
+..+++|++|++++|.+..++. |..+++|++|+|++|++++.+. +..+++|++|++++|.++. + ..|..+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~~~--~~~~~~L~~L~l~~n~i~~~~~------~~~l~~L~~L~L~~n~i~~-~-~~~~~l 109 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASIQG--IEYLTNLEYLNLNGNQITDISP------LSNLVKLTNLYIGTNKITD-I-SALQNL 109 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG------GTTCTTCCEEECCSSCCCC-C-GGGTTC
T ss_pred chhcccccEEEEeCCccccchh--hhhcCCccEEEccCCccccchh------hhcCCcCCEEEccCCcccC-c-hHHcCC
Confidence 5678899999999999988764 8889999999999998885432 7788999999999999985 3 368999
Q ss_pred CCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEc
Q 003156 103 HYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDF 182 (843)
Q Consensus 103 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 182 (843)
++|++|+|++|.+++..+ +..+++|++|++++|..... ...+..+++|++|++++|.+.+..+ +..+++|++|++
T Consensus 110 ~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 110 TNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSL 184 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEEC
T ss_pred CcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEc
Confidence 999999999999985543 88899999999999966543 3448899999999999999885544 889999999999
Q ss_pred ccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCC
Q 003156 183 SNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSN 262 (843)
Q Consensus 183 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n 262 (843)
++|.+++. +. +..+++|+.|++++|.+.+..+ + ..+++|++|++++|
T Consensus 185 ~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~-----------------------------~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 185 NYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--V-----------------------------ANMTRLNSLKIGNN 231 (347)
T ss_dssp TTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--G-----------------------------GGCTTCCEEECCSS
T ss_pred cCCccccc-cc-ccCCCccceeecccCCCCCCch--h-----------------------------hcCCcCCEEEccCC
Confidence 99999854 33 7888889999988888873221 1 22456777777777
Q ss_pred ccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchh
Q 003156 263 NLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQ 342 (843)
Q Consensus 263 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 342 (843)
.+++..+ +..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|.+++..|.
T Consensus 232 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 232 KITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred ccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh
Confidence 7764333 66667777777777766543 3455555555555555555532 2345555555555555555555555
Q ss_pred hhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc
Q 003156 343 VIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 343 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
.|.++++|+.|+|++|++++..| +..+++|++|++++|+|+
T Consensus 306 ~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 306 VIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred HhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 55555555555555555554333 455555555555555543
No 284
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.1e-35 Score=317.77 Aligned_cols=258 Identities=28% Similarity=0.464 Sum_probs=194.4
Q ss_pred CCcEEEeecCcccc--cCCCCccCCCCccEEEccc-CCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceee
Q 003156 152 SMIFISVSNNTLTG--DIPHWIGNISTLEFLDFSN-NHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEID 228 (843)
Q Consensus 152 ~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~ 228 (843)
+++.|+|++|++.+ .+|..|+++++|++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..+.
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-------- 122 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS-------- 122 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGG--------
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHh--------
Confidence 34444444444444 4445555555555555552 555555555555555555555555555544443332
Q ss_pred ccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccc-cceEEEc
Q 003156 229 LSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFH-SLIHLDL 307 (843)
Q Consensus 229 l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L 307 (843)
.+++|++|+|++|.+++.+|..+..+++|++|++++|++++..|..+..+. +|++|++
T Consensus 123 ---------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L 181 (313)
T 1ogq_A 123 ---------------------QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181 (313)
T ss_dssp ---------------------GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEEC
T ss_pred ---------------------CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEEC
Confidence 235566666666666666666677777777777777777766777777776 7888888
Q ss_pred cCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccccc
Q 003156 308 RNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGE 387 (843)
Q Consensus 308 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 387 (843)
++|++++.+|..+..++ |+.|++++|.+++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.
T Consensus 182 ~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~ 259 (313)
T 1ogq_A 182 SRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGT 259 (313)
T ss_dssp CSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEEC
T ss_pred cCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCc
Confidence 88888888888888887 99999999999888899999999999999999999976665 88899999999999999999
Q ss_pred CCcchhcccccceEeeccccceecCCCCCCCCCCCCCCcCCCCCCCCCCCCCCC
Q 003156 388 IPQELGKLASLLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGICSPLLKGPC 441 (843)
Q Consensus 388 ~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~c 441 (843)
+|..+..+++|+.|++++|+++|.+|..+.++++....+.||+++||.|+. .|
T Consensus 260 ~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 260 LPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 999999999999999999999999999888999999999999999998875 56
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1e-34 Score=315.98 Aligned_cols=318 Identities=20% Similarity=0.287 Sum_probs=269.4
Q ss_pred ccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCC
Q 003156 34 LAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGN 113 (843)
Q Consensus 34 L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 113 (843)
+..+.+.++. .+..+++|++|++++|.+...+ .+..+++|++|++++|++++..+ +..+++|++|+|++|
T Consensus 29 ~~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~~------~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n 98 (347)
T 4fmz_A 29 LQKASVTDVV--TQEELESITKLVVAGEKVASIQ------GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTN 98 (347)
T ss_dssp HTCSCTTSEE--CHHHHTTCSEEECCSSCCCCCT------TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred ccccccCCcc--cchhcccccEEEEeCCccccch------hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCC
Confidence 3444444333 3567899999999999988542 37789999999999999985443 999999999999999
Q ss_pred cccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCC
Q 003156 114 QFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPS 193 (843)
Q Consensus 114 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~ 193 (843)
.+++. + .+..+++|++|++++|.+++..+ +..+++|+.|++++|......+ .+..+++|++|++++|.+.+..+
T Consensus 99 ~i~~~-~-~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~- 172 (347)
T 4fmz_A 99 KITDI-S-ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP- 172 (347)
T ss_dssp CCCCC-G-GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-
T ss_pred cccCc-h-HHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh-
Confidence 99853 3 59999999999999999996544 8899999999999997664444 48999999999999999985433
Q ss_pred CCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCcccc
Q 003156 194 SLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMG 273 (843)
Q Consensus 194 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 273 (843)
+..+++|+.|++++|.+.+ ++. ...+++|+.|++++|.+.+..+ +.
T Consensus 173 -~~~l~~L~~L~l~~n~l~~-~~~------------------------------~~~l~~L~~L~l~~n~l~~~~~--~~ 218 (347)
T 4fmz_A 173 -IANLTDLYSLSLNYNQIED-ISP------------------------------LASLTSLHYFTAYVNQITDITP--VA 218 (347)
T ss_dssp -GGGCTTCSEEECTTSCCCC-CGG------------------------------GGGCTTCCEEECCSSCCCCCGG--GG
T ss_pred -hccCCCCCEEEccCCcccc-ccc------------------------------ccCCCccceeecccCCCCCCch--hh
Confidence 8899999999999999873 221 1236789999999999985544 88
Q ss_pred CCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEE
Q 003156 274 LFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLL 353 (843)
Q Consensus 274 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 353 (843)
.+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|
T Consensus 219 ~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L 292 (347)
T 4fmz_A 219 NMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSL 292 (347)
T ss_dssp GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred cCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEE
Confidence 99999999999999987654 88999999999999999853 5789999999999999999964 458999999999
Q ss_pred ecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccce
Q 003156 354 SLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLI 409 (843)
Q Consensus 354 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 409 (843)
++++|++++..|..++.+++|++|+|++|++++..| +..+++|+.|++++|+++
T Consensus 293 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 293 FLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999998899999999999999999999997666 889999999999999985
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.8e-35 Score=311.73 Aligned_cols=231 Identities=13% Similarity=0.071 Sum_probs=185.1
Q ss_pred hhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
+.|+..+.||+|+||.||+|.+..+++.||||.+...... ...+.+.+|+..+++++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 4467778999999999999999888999999999654322 22367899999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++++|.++++.. ....++..++.|++.||+|||+. +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999999642 35567889999999999999999 99999999999999999999998443
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
|++| ++.++|||||||++|||+||+.||.......... .....+..
T Consensus 175 ---------------~~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-----------~~~~~~~~ 220 (286)
T 3uqc_A 175 ---------------TMPD--------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-----------PAERDTAG 220 (286)
T ss_dssp ---------------CCTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-----------ECCBCTTS
T ss_pred ---------------ccCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-----------HHHHHhcc
Confidence 3332 5789999999999999999999997643211000 00000000
Q ss_pred CCC---CCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHHHHhccCC
Q 003156 792 SMG---DYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTP 835 (843)
Q Consensus 792 ~l~---~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L~~~~~~ 835 (843)
... ......+.++.+++.+||+.||++| |+.|+++.|+.+...
T Consensus 221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 000 1223455678999999999999999 999999999987653
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.8e-35 Score=340.44 Aligned_cols=311 Identities=23% Similarity=0.217 Sum_probs=200.1
Q ss_pred CCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCC
Q 003156 27 ASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLK 106 (843)
Q Consensus 27 ~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 106 (843)
++++.|++++|.+..+++..|.++++|++|+|++|.|++.++ ..|..+++|++|+|++|.+++..|..|+.+++|+
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 126 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDT----YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT 126 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECT----TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCCh----HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCC
Confidence 444555555555555555555555555555555555443221 1344445555555555555444444445555555
Q ss_pred EEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCC
Q 003156 107 ELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNH 186 (843)
Q Consensus 107 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 186 (843)
+|+|++|.+++..+..|.++++|++|+|++|.+++..|..| +++++|++|+|++|.
T Consensus 127 ~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~------------------------~~l~~L~~L~L~~N~ 182 (597)
T 3oja_B 127 VLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF------------------------QATTSLQNLQLSSNR 182 (597)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT------------------------TTCTTCCEEECTTSC
T ss_pred EEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh------------------------hcCCcCcEEECcCCC
Confidence 55555555544333334445555555555555544444444 444444444444444
Q ss_pred cCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccce
Q 003156 187 LTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVG 266 (843)
Q Consensus 187 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~ 266 (843)
+++. .+..+++|+.|++++|.+++. + ...+|+.|++++|.+....+. ..++|+.|+|++|.+++
T Consensus 183 l~~~---~~~~l~~L~~L~l~~n~l~~l-~---~~~~L~~L~ls~n~l~~~~~~---------~~~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 183 LTHV---DLSLIPSLFHANVSYNLLSTL-A---IPIAVEELDASHNSINVVRGP---------VNVELTILKLQHNNLTD 246 (597)
T ss_dssp CSBC---CGGGCTTCSEEECCSSCCSEE-E---CCTTCSEEECCSSCCCEEECS---------CCSCCCEEECCSSCCCC
T ss_pred CCCc---ChhhhhhhhhhhcccCccccc-c---CCchhheeeccCCcccccccc---------cCCCCCEEECCCCCCCC
Confidence 4432 133344444555555444421 0 011355555555555432211 13579999999999985
Q ss_pred eCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcc
Q 003156 267 DIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRN 346 (843)
Q Consensus 267 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 346 (843)
+..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..
T Consensus 247 --~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~ 322 (597)
T 3oja_B 247 --TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ 322 (597)
T ss_dssp --CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH
T ss_pred --ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCccccc
Confidence 4778899999999999999999889999999999999999999995 5777788999999999999999 68888999
Q ss_pred cCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccC
Q 003156 347 CTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEI 388 (843)
Q Consensus 347 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 388 (843)
+++|+.|+|++|.|++. | +..+++|+.|+|++|.+++..
T Consensus 323 l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 323 FDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp HTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChh
Confidence 99999999999999854 4 778899999999999998654
No 288
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.3e-34 Score=307.90 Aligned_cols=223 Identities=20% Similarity=0.322 Sum_probs=178.8
Q ss_pred CeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHH-HhccCCCccceeeEEEc----CCeeEEEEEeC
Q 003156 560 AEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVL-GKARHPNLISLEGYYWT----PQLKLLVSDYA 634 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~----~~~~~lV~e~~ 634 (843)
+.||+|+||.||+|....+++.||+|.+.. ...+.+|+.++ +..+||||+++++++.. ....++||||+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 579999999999999988999999999853 24677899888 55589999999999876 56789999999
Q ss_pred CCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcC---CCCcEEeeccCcccccc
Q 003156 635 PNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDD---NYNPRISDFGLARLLTR 711 (843)
Q Consensus 635 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~~~~ 711 (843)
++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 98 ~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 98 DGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 9999999998752 34689999999999999999999998 9999999999999997 7899999999986432
Q ss_pred cccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCC
Q 003156 712 LDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDP 791 (843)
Q Consensus 712 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 791 (843)
+..++.++||||+||++|||++|+.||........ . ......+..
T Consensus 172 ------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----------~-~~~~~~~~~ 216 (299)
T 3m2w_A 172 ------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----------S-PGMKTRIRM 216 (299)
T ss_dssp ------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSCT
T ss_pred ------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh----------h-HHHHHHHhh
Confidence 12467899999999999999999999965322110 0 001111111
Q ss_pred CCCCCC----hhhHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 003156 792 SMGDYP----EDEVLPVLKLALVCTCHIPSSRPSMAEVVQIL 829 (843)
Q Consensus 792 ~l~~~~----~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~L 829 (843)
.....+ .....++.+++.+||+.||++|||+.|++++-
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 111122 33466789999999999999999999999863
No 289
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-35 Score=348.64 Aligned_cols=240 Identities=19% Similarity=0.217 Sum_probs=190.7
Q ss_pred hhhhhcCeeccccceEEEEEEECC-CCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCccceeeEEEcCCe-----e
Q 003156 554 TLLEKAAEVGEGVFGTVYKVSFGT-QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQL-----K 627 (843)
Q Consensus 554 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----~ 627 (843)
+.|+..+.||+|+||.||+|.+.. +|+.||||++.........+.+.+|+.++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 457778899999999999999965 6899999998654433445678899999999999999999999987655 6
Q ss_pred EEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 628 LLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 628 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
++||||+++++|.+++.. .++|..++.++.|++.||.|||+. +|+||||||+||+++.+ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 999999999999887654 589999999999999999999998 99999999999999985 89999999998
Q ss_pred cccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCccc
Q 003156 708 LLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLD 787 (843)
Q Consensus 708 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (843)
..... ....||++|+|||++.. .++.++|||||||++|||++|..||.......
T Consensus 230 ~~~~~------~~~~gt~~y~aPE~~~~--~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------------ 283 (681)
T 2pzi_A 230 RINSF------GYLYGTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG------------------ 283 (681)
T ss_dssp ETTCC------SCCCCCTTTSCTTHHHH--CSCHHHHHHHHHHHHHHHHSCCCEETTEECSS------------------
T ss_pred hcccC------CccCCCccccCHHHHcC--CCCCceehhhhHHHHHHHHhCCCCCccccccc------------------
Confidence 65432 34578999999998733 34889999999999999999988875321100
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHhc
Q 003156 788 CVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPS-MAEVVQILQVI 832 (843)
Q Consensus 788 ~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs-~~evl~~L~~~ 832 (843)
+.. ..........+.+++.+||+.||++||+ ++++.+.+..+
T Consensus 284 -~~~--~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 284 -LPE--DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp -CCT--TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred -ccc--cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 000 0001122356889999999999999995 55555555543
No 290
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-35 Score=328.15 Aligned_cols=244 Identities=16% Similarity=0.083 Sum_probs=181.0
Q ss_pred hhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc--cChHHHHHHHHHHHhccC-CCccce---------eeE---
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII--QYPEDFEREVRVLGKARH-PNLISL---------EGY--- 620 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h-~niv~l---------~g~--- 620 (843)
+...+.||+|+||.||+|.+..+|+.||||++...... ...+.+.+|+.+++.++| ++.... ...
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 45567899999999999999889999999998633322 235789999999999987 322111 111
Q ss_pred ---------EEc-----CCeeEEEEEeCCCCCHHHHHhhc---CCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeec
Q 003156 621 ---------YWT-----PQLKLLVSDYAPNGSLQAKLHER---LPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHY 683 (843)
Q Consensus 621 ---------~~~-----~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 683 (843)
+.. ....+++|+++ +|+|.+++... ......+++..++.++.|+++||+|||+. +|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHr 235 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHT 235 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 111 12346677765 68999988532 22345688899999999999999999998 99999
Q ss_pred CCCCCCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCccccc---------CcCCCCCchhHHHHHHHHHH
Q 003156 684 NLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTC---------QSLRVNEKCDIYGFGVLILE 754 (843)
Q Consensus 684 dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---------~~~~~~~~~Dv~S~Gvil~e 754 (843)
||||+|||++.++.+||+|||+++..... .....| +.|+|||++. ....++.++|||||||++||
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred CcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 99999999999999999999999865432 234566 8999999873 34457889999999999999
Q ss_pred HHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003156 755 LVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQI 828 (843)
Q Consensus 755 lltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l~~~c~~~~P~~RPs~~evl~~ 828 (843)
|+||+.||....... .....+. . ....+.++.+++.+||+.||++|||+.|++++
T Consensus 310 lltg~~Pf~~~~~~~--------------~~~~~~~-~----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 310 IWCADLPNTDDAALG--------------GSEWIFR-S----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHSSCCCCTTGGGS--------------CSGGGGS-S----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHCCCCCCCcchhh--------------hHHHHHh-h----cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 999999996532211 0001111 0 11234578899999999999999998877543
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2e-33 Score=303.64 Aligned_cols=130 Identities=18% Similarity=0.188 Sum_probs=65.9
Q ss_pred CCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecc
Q 003156 277 NLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLS 356 (843)
Q Consensus 277 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 356 (843)
+|++|++++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|+
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECC
Confidence 4444444444444444444444444444444444444444444555555555555555555 444455555555555555
Q ss_pred cccccccCCccccC------CCCCCEEEccCCccc--ccCCcchhcccccceEeecccc
Q 003156 357 HNHLSGSIPKSISN------LNKLKILKLEFNELS--GEIPQELGKLASLLAVNVSYNR 407 (843)
Q Consensus 357 ~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~l~ls~N~ 407 (843)
+|+|++..+..|.. ..+|+.|++++|.+. +..|..+..+++|+.+++++|+
T Consensus 273 ~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 273 TNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 55555444444433 245666666666665 4555666666666666666653
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.6e-33 Score=300.52 Aligned_cols=295 Identities=21% Similarity=0.205 Sum_probs=147.3
Q ss_pred CCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcE
Q 003156 52 SLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTT 131 (843)
Q Consensus 52 ~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 131 (843)
+|+.++++++.++..+... .++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++
T Consensus 32 ~l~~l~~~~~~l~~lp~~~-------~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDL-------PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLER 104 (330)
T ss_dssp ETTEEECTTSCCCSCCCSC-------CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCE
T ss_pred CCeEEEecCCCccccCccC-------CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCE
Confidence 4555555555555433211 134555555555555544445555555555555555555555555555555555
Q ss_pred EEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCC--CCCCCCCCCCCCcEEEecCC
Q 003156 132 LDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTG--SLPSSLFNCKKLSVIRLRGN 209 (843)
Q Consensus 132 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~N 209 (843)
|+|++|.++. +|..+. ++|++|++++|++.+..+..|.++++|++|++++|.++. ..+..+..+++|+.|++++|
T Consensus 105 L~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n 181 (330)
T 1xku_A 105 LYLSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT 181 (330)
T ss_dssp EECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSS
T ss_pred EECCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCC
Confidence 5555555552 222221 455555555555554444445555555555555555532 34445555555555555555
Q ss_pred cCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCccc
Q 003156 210 SLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLR 289 (843)
Q Consensus 210 ~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 289 (843)
.++ .+|..+ .++|++|++++|++++..|..+..+++|++|++++|.++
T Consensus 182 ~l~-~l~~~~-------------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 229 (330)
T 1xku_A 182 NIT-TIPQGL-------------------------------PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 229 (330)
T ss_dssp CCC-SCCSSC-------------------------------CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred ccc-cCCccc-------------------------------cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc
Confidence 554 122110 134555666666655555555555555555555555555
Q ss_pred CCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCcccc
Q 003156 290 SRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSIS 369 (843)
Q Consensus 290 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 369 (843)
+..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|.|++..+..|.... ...
T Consensus 230 ~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~ 290 (330)
T 1xku_A 230 AVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNT 290 (330)
T ss_dssp EECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCT
T ss_pred eeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------ccc
Confidence 544444555555555555555554 4444444455555555555555443333332210 000
Q ss_pred CCCCCCEEEccCCcccc--cCCcchhcccccceEeecccc
Q 003156 370 NLNKLKILKLEFNELSG--EIPQELGKLASLLAVNVSYNR 407 (843)
Q Consensus 370 ~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~l~ls~N~ 407 (843)
..+.|+.|++++|.+.. ..|..+..+.+++.+++++|+
T Consensus 291 ~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 291 KKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 12455556666665542 344555556666666666553
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.3e-32 Score=296.89 Aligned_cols=288 Identities=21% Similarity=0.210 Sum_probs=183.5
Q ss_pred ccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEe
Q 003156 79 KRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISV 158 (843)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 158 (843)
.+++.++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 45666666666665 3443332 45666666666666555555566666666666666665554555555555555555
Q ss_pred ecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecC
Q 003156 159 SNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSI 238 (843)
Q Consensus 159 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~ 238 (843)
++|+++ .+|..+. ++|++|++++|.+++..+..|.+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~--------------------------------------- 145 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLN--------------------------------------- 145 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCT---------------------------------------
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCc---------------------------------------
Confidence 555554 2332222 3444444444444433333344444
Q ss_pred CCCCCCCCcccccCccCEEeCCCCccc--eeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccC
Q 003156 239 PPGSSSSSSSTLFQTLRILDLSSNNLV--GDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSI 316 (843)
Q Consensus 239 p~~~~~~~~~~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 316 (843)
+|+.|++++|.+. +..+..+..+++|++|++++|.++.+ |..+. ++|++|++++|++++..
T Consensus 146 --------------~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 146 --------------QMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-PQGLP--PSLTELHLDGNKITKVD 208 (330)
T ss_dssp --------------TCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC-CSSCC--TTCSEEECTTSCCCEEC
T ss_pred --------------cccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC-Ccccc--ccCCEEECCCCcCCccC
Confidence 4444444444443 24455666667777777777777643 33332 67888888888888777
Q ss_pred CccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhc--
Q 003156 317 PQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGK-- 394 (843)
Q Consensus 317 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-- 394 (843)
+..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~ 287 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc
Confidence 888888889999999999988777778888999999999999998 78888889999999999999999777777654
Q ss_pred ----ccccceEeecccccee-cCCC--CCCCCCCCCCCcCCC
Q 003156 395 ----LASLLAVNVSYNRLIG-RLPV--GGVFPTLDQSSLQGN 429 (843)
Q Consensus 395 ----l~~L~~l~ls~N~l~~-~~p~--~~~~~~~~~~~~~~n 429 (843)
...|+.|++++|++.. .++. ...+..+....+.+|
T Consensus 288 ~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 288 YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred cccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 3788999999999864 2221 122344455555555
No 294
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.3e-34 Score=313.45 Aligned_cols=245 Identities=16% Similarity=0.129 Sum_probs=185.9
Q ss_pred hhhhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCc-------ccChHHHHHHHHHHHhcc---------CCCccc
Q 003156 553 ETLLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI-------IQYPEDFEREVRVLGKAR---------HPNLIS 616 (843)
Q Consensus 553 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------h~niv~ 616 (843)
.+.|+..+.||+|+||+||+|++ +|+.||||++..... ....+.+.+|+.+++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46688888999999999999998 689999999976532 233478899999999996 777777
Q ss_pred eeeEEE-----------------c-------------CCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHH
Q 003156 617 LEGYYW-----------------T-------------PQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTA 666 (843)
Q Consensus 617 l~g~~~-----------------~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia 666 (843)
+.+++. + .+..++||||+++|++.+.+.. ..+++..+..++.|++
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence 766643 2 6778999999999977666643 3579999999999999
Q ss_pred HHHHhhh-hcCCCCeeecCCCCCCEEEcCCC--------------------CcEEeeccCcccccccccceecccccccc
Q 003156 667 KGLAHLH-HSFRPPIIHYNLKPSNILLDDNY--------------------NPRISDFGLARLLTRLDKHVMSNRFQSAL 725 (843)
Q Consensus 667 ~~l~~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~ 725 (843)
.||+||| +. +|+||||||+|||++.++ .+||+|||+++.... ....||.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~ 241 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCD 241 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEee
Confidence 9999999 88 999999999999999887 899999999986653 2347899
Q ss_pred ccCCcccccCcCCCCCchhHHHHHHH-HHHHHhCCCCCcCCCCchhhHHHHHHHHHhhCCcccccCCCCCCCChhhHHHH
Q 003156 726 GYVAPELTCQSLRVNEKCDIYGFGVL-ILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPV 804 (843)
Q Consensus 726 ~y~aPE~~~~~~~~~~~~Dv~S~Gvi-l~elltg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l 804 (843)
.|+|||++.+. . +.++||||+|++ .+++++|..||... ................. .............++
T Consensus 242 ~y~aPE~~~g~-~-~~~~Diwsl~~~~~~~~~~g~~p~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 242 VSMDEDLFTGD-G-DYQFDIYRLMKKENNNRWGEYHPYSNV----LWLHYLTDKMLKQMTFK---TKCNTPAMKQIKRKI 312 (336)
T ss_dssp CTTCSGGGCCC-S-SHHHHHHHHHHHHHTTCTTSCCTHHHH----HHHHHHHHHHHHTCCCS---SCCCSHHHHHHHHHH
T ss_pred cccChhhhcCC-C-ccceehhhhhCCCCcccccccCCCcch----hhhhHHHHhhhhhhccC---cccchhhhhhcCHHH
Confidence 99999998433 3 889999998777 77888999998421 00011111111111110 011111234567789
Q ss_pred HHHHHHccCCCCCCCCCHHHHH-HH
Q 003156 805 LKLALVCTCHIPSSRPSMAEVV-QI 828 (843)
Q Consensus 805 ~~l~~~c~~~~P~~RPs~~evl-~~ 828 (843)
.+++.+|++.| |++|++ ++
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHhccC-----CHHHHHhcC
Confidence 99999999976 999998 54
No 295
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-33 Score=302.11 Aligned_cols=253 Identities=28% Similarity=0.477 Sum_probs=190.7
Q ss_pred CCCcEEEccCCcccc--cCCchhhcccCCcEEEeec-CcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcE
Q 003156 127 PHLTTLDLSNNLFTG--QLPVSLRLLNSMIFISVSN-NTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSV 203 (843)
Q Consensus 127 ~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 203 (843)
.+++.|+|++|.+++ .+|..|..+++|++|+|++ |++.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356666666666665 5666666666666666663 6666666666666666666666666666666666666666777
Q ss_pred EEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCC-CCcEEE
Q 003156 204 IRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFA-NLRYLN 282 (843)
Q Consensus 204 L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~ 282 (843)
|+|++|.+++.+|..+.. +++|++|+|++|++++.+|..+..++ +|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~-----------------------------l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~ 180 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISS-----------------------------LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180 (313)
T ss_dssp EECCSSEEESCCCGGGGG-----------------------------CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEE
T ss_pred EeCCCCccCCcCChHHhc-----------------------------CCCCCeEECcCCcccCcCCHHHhhhhhcCcEEE
Confidence 776666666555544332 45666666666666666777777766 777777
Q ss_pred cCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccc
Q 003156 283 LSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSG 362 (843)
Q Consensus 283 L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 362 (843)
+++|++++..|..+..+. |++|++++|++++..|..+..+++|+.|+|++|.+++.+|. +..+++|++|+|++|++++
T Consensus 181 L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~ 258 (313)
T 1ogq_A 181 ISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYG 258 (313)
T ss_dssp CCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEE
T ss_pred CcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccC
Confidence 777777777777777776 88888888888888888888888999999999988866665 7888999999999999998
Q ss_pred cCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeecccc-ceec
Q 003156 363 SIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNR-LIGR 411 (843)
Q Consensus 363 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~-l~~~ 411 (843)
.+|..|..+++|++|+|++|+++|.+|.. ..+++|+.+++++|+ ++|.
T Consensus 259 ~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 259 TLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred cCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 99999999999999999999999999887 889999999999998 5553
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.5e-32 Score=296.61 Aligned_cols=288 Identities=20% Similarity=0.226 Sum_probs=192.9
Q ss_pred CCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcE
Q 003156 52 SLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTT 131 (843)
Q Consensus 52 ~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 131 (843)
+|+.+++++|.+...+... .++|++|+|++|.+.+..+..|..+++|++|+|++|++++..|..|..+++|++
T Consensus 34 ~l~~l~~~~~~l~~ip~~~-------~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 106 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEI-------SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQK 106 (332)
T ss_dssp ETTEEECCSSCCSSCCSCC-------CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCE
T ss_pred cCCEEECCCCCccccCCCC-------CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCE
Confidence 4555566555555433211 135555555555555544555555555555555555555555555555555555
Q ss_pred EEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCC--CCCCCCCCCCCCcEEEecCC
Q 003156 132 LDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTG--SLPSSLFNCKKLSVIRLRGN 209 (843)
Q Consensus 132 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~N 209 (843)
|+|++|.++. +|..+. ++|++|++++|++.+..+..|.++++|++|++++|.++. ..+..+..+ +
T Consensus 107 L~L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~--------- 173 (332)
T 2ft3_A 107 LYISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-K--------- 173 (332)
T ss_dssp EECCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-C---------
T ss_pred EECCCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-c---------
Confidence 5555555552 222222 445555555555554433444555555555555555432 334444444 4
Q ss_pred cCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCccc
Q 003156 210 SLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLR 289 (843)
Q Consensus 210 ~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 289 (843)
|+.|++++|++.+ +|.. ..++|++|++++|.+++..+..+..+++|++|++++|.++
T Consensus 174 --------------L~~L~l~~n~l~~-l~~~--------~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~ 230 (332)
T 2ft3_A 174 --------------LNYLRISEAKLTG-IPKD--------LPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR 230 (332)
T ss_dssp --------------CSCCBCCSSBCSS-CCSS--------SCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC
T ss_pred --------------cCEEECcCCCCCc-cCcc--------ccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 4445555554442 2221 1257899999999999888889999999999999999999
Q ss_pred CCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhccc------CCCcEEeccccccc--
Q 003156 290 SRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNC------TSLYLLSLSHNHLS-- 361 (843)
Q Consensus 290 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~-- 361 (843)
+..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|.|++..+..|..+ ..|+.|++++|.+.
T Consensus 231 ~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 231 MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp CCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred cCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 988889999999999999999999 788889999999999999999998777777653 67999999999987
Q ss_pred ccCCccccCCCCCCEEEccCCc
Q 003156 362 GSIPKSISNLNKLKILKLEFNE 383 (843)
Q Consensus 362 ~~~p~~~~~l~~L~~L~L~~N~ 383 (843)
+..|..|..+++|+.|+|++|+
T Consensus 310 ~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 310 EVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GSCGGGGTTBCCSTTEEC----
T ss_pred ccCcccccccchhhhhhccccc
Confidence 6788889999999999999985
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=6.6e-37 Score=347.12 Aligned_cols=381 Identities=19% Similarity=0.121 Sum_probs=264.4
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCcccccc----ccccccCCCCCCEEECCCCCCccccCCCcCccccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGP----IGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWS 77 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~----~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~ 77 (843)
++|++|+|++|++++.....+|..+++|++|+|++|.+... .+..|..+++|++|+|++|.+++.... ..+..
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~---~l~~~ 79 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVH---CVLQG 79 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHH---HHHHT
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHH---HHHHH
Confidence 57899999999998444455589999999999999999853 245678889999999999998753211 01223
Q ss_pred Cc----cCCEEecCCccCcc----cCchhhhcCCCCCEEEcCCCcccccCCCC-----CCCCCCCcEEEccCCcccccC-
Q 003156 78 LK----RLRTLDLSHNLFSG----SIPQGVAALHYLKELLLQGNQFSGPLPAD-----IGFCPHLTTLDLSNNLFTGQL- 143 (843)
Q Consensus 78 l~----~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-----~~~l~~L~~L~L~~N~l~~~~- 143 (843)
++ +|++|+|++|+++. .++..+..+++|++|+|++|.+++..+.. +...++|++|+|++|++++..
T Consensus 80 l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 159 (461)
T 1z7x_W 80 LQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASC 159 (461)
T ss_dssp TCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGH
T ss_pred HhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHH
Confidence 44 79999999999984 45888999999999999999987543322 233678999999999998644
Q ss_pred ---CchhhcccCCcEEEeecCcccccCCCCcc-----CCCCccEEEcccCCcCCC----CCCCCCCCCCCcEEEecCCcC
Q 003156 144 ---PVSLRLLNSMIFISVSNNTLTGDIPHWIG-----NISTLEFLDFSNNHLTGS----LPSSLFNCKKLSVIRLRGNSL 211 (843)
Q Consensus 144 ---~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l 211 (843)
+..+..+++|++|++++|++....+..+. .+++|++|+|++|.++.. ++..+..+++|+.|++++|.+
T Consensus 160 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 239 (461)
T 1z7x_W 160 EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKL 239 (461)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred HHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcC
Confidence 55667789999999999988754444343 256899999999988853 466677788888888888887
Q ss_pred CCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCcccee----CCccccCCCCCcEEEcCCCc
Q 003156 212 NGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGD----IPAEMGLFANLRYLNLSSNH 287 (843)
Q Consensus 212 ~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~ 287 (843)
+......+... ....+++|++|++++|.+++. ++..+..+++|++|++++|.
T Consensus 240 ~~~~~~~l~~~------------------------~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 295 (461)
T 1z7x_W 240 GDVGMAELCPG------------------------LLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295 (461)
T ss_dssp HHHHHHHHHHH------------------------HTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred ChHHHHHHHHH------------------------HhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCC
Confidence 63221111110 001245677777777777643 45566667778888888877
Q ss_pred ccCCCCCCccc-----cccceEEEccCCccccc----CCccccccCCCcEEEcCCCCCCCCchhhhcc-----cCCCcEE
Q 003156 288 LRSRIPPELGY-----FHSLIHLDLRNNALYGS----IPQEVCESRSLGILQLDGNSLTGPIPQVIRN-----CTSLYLL 353 (843)
Q Consensus 288 l~~~~~~~~~~-----l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L 353 (843)
+++..+..+.. .++|++|++++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|
T Consensus 296 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L 375 (461)
T 1z7x_W 296 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVL 375 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred CchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEE
Confidence 76433322322 24777777777777754 3455566677788888887777655555543 5677788
Q ss_pred ecccccccc----cCCccccCCCCCCEEEccCCcccccCCcchh-----cccccceEeeccccce
Q 003156 354 SLSHNHLSG----SIPKSISNLNKLKILKLEFNELSGEIPQELG-----KLASLLAVNVSYNRLI 409 (843)
Q Consensus 354 ~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~l~ls~N~l~ 409 (843)
+|++|++++ .+|..+..+++|++|+|++|++++.-...+. ....|+.|++.+|.+.
T Consensus 376 ~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 376 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred ECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 888887775 5677777777788888888877754222221 1224555665555543
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.4e-35 Score=336.19 Aligned_cols=361 Identities=20% Similarity=0.166 Sum_probs=270.0
Q ss_pred CCCCcEEEccCccccccccc-cccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhh-hcCC
Q 003156 26 CASLRYLSLAGNILQGPIGK-IFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGV-AALH 103 (843)
Q Consensus 26 l~~L~~L~L~~n~i~~~~~~-~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~ 103 (843)
+++|++|+|++|++...... .|..+++|++|+|++|.++.......+..+..+++|++|+|++|.+.+..+..+ ..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 36789999999999765543 478899999999999998743211122356677999999999999876544433 4465
Q ss_pred ----CCCEEEcCCCcccc----cCCCCCCCCCCCcEEEccCCcccccCCchhhc-----ccCCcEEEeecCcccccC---
Q 003156 104 ----YLKELLLQGNQFSG----PLPADIGFCPHLTTLDLSNNLFTGQLPVSLRL-----LNSMIFISVSNNTLTGDI--- 167 (843)
Q Consensus 104 ----~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~~--- 167 (843)
+|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+.. .++|++|+|++|++++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 69999999999884 45777888999999999999987654444432 456888888888877532
Q ss_pred -CCCccCCCCccEEEcccCCcCCCCCCCCC-----CCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCC
Q 003156 168 -PHWIGNISTLEFLDFSNNHLTGSLPSSLF-----NCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPG 241 (843)
Q Consensus 168 -p~~~~~l~~L~~L~L~~N~i~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~ 241 (843)
+..+..+++|++|+|++|.+++..+..+. ..++|+.|++++|.++......+..
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~-------------------- 221 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG-------------------- 221 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH--------------------
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH--------------------
Confidence 44556677888888888877643333332 2457777777777776321111110
Q ss_pred CCCCCcccccCccCEEeCCCCccceeC-----CccccCCCCCcEEEcCCCcccCC----CCCCccccccceEEEccCCcc
Q 003156 242 SSSSSSSTLFQTLRILDLSSNNLVGDI-----PAEMGLFANLRYLNLSSNHLRSR----IPPELGYFHSLIHLDLRNNAL 312 (843)
Q Consensus 242 ~~~~~~~~~l~~L~~L~L~~n~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~n~l 312 (843)
....+++|++|++++|.+.+.. +..+..+++|++|++++|.++.. ++..+..+++|++|++++|.+
T Consensus 222 -----~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 296 (461)
T 1z7x_W 222 -----IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296 (461)
T ss_dssp -----HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCC
T ss_pred -----HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCC
Confidence 0123578999999999887543 33344688999999999999864 455677789999999999999
Q ss_pred cccCCcccccc-----CCCcEEEcCCCCCCCC----chhhhcccCCCcEEecccccccccCCccccC-----CCCCCEEE
Q 003156 313 YGSIPQEVCES-----RSLGILQLDGNSLTGP----IPQVIRNCTSLYLLSLSHNHLSGSIPKSISN-----LNKLKILK 378 (843)
Q Consensus 313 ~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~ 378 (843)
++..+..+... ++|+.|++++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|++|+
T Consensus 297 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~ 376 (461)
T 1z7x_W 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLW 376 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred chHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEE
Confidence 86555555443 6999999999999876 5677888999999999999998766665543 78999999
Q ss_pred ccCCcccc----cCCcchhcccccceEeeccccceec
Q 003156 379 LEFNELSG----EIPQELGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 379 L~~N~l~~----~~p~~~~~l~~L~~l~ls~N~l~~~ 411 (843)
|++|++++ .+|..+..+++|+.|++++|++++.
T Consensus 377 L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 377 LADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 99999997 7899999999999999999998765
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=278.93 Aligned_cols=199 Identities=21% Similarity=0.181 Sum_probs=106.1
Q ss_pred EEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEe
Q 003156 6 FLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLD 85 (843)
Q Consensus 6 ~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~ 85 (843)
..++++|+++ .+|...+ ++|++|+|++|+|.+++...|.++++|++|+|++|++++..+ ..|..+++|++|+
T Consensus 35 ~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~ 106 (353)
T 2z80_A 35 ICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE----DSFSSLGSLEHLD 106 (353)
T ss_dssp EEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECT----TTTTTCTTCCEEE
T ss_pred EeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCH----hhcCCCCCCCEEE
Confidence 3555566665 5554432 355666666666665555555666666666666665554322 2355555666666
Q ss_pred cCCccCcccCchhhhcCCCCCEEEcCCCcccccCC-CCCCCCCCCcEEEccCC-cccccCCchhhcccCCcEEEeecCcc
Q 003156 86 LSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLP-ADIGFCPHLTTLDLSNN-LFTGQLPVSLRLLNSMIFISVSNNTL 163 (843)
Q Consensus 86 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l 163 (843)
|++|++++..+..|..+++|++|+|++|++++..+ ..|..+++|++|++++| .++...+..|..+++|++|++++|++
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 66666654444445556666666666665553332 24555555666666555 34444445555555555555555555
Q ss_pred cccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCC
Q 003156 164 TGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLN 212 (843)
Q Consensus 164 ~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (843)
.+..|..|..+++|++|++++|.++...+..+..+++|+.|++++|.++
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 5555555555555555555555554222222223455555555555554
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1e-29 Score=277.06 Aligned_cols=254 Identities=19% Similarity=0.202 Sum_probs=123.9
Q ss_pred cCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEee
Q 003156 80 RLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVS 159 (843)
Q Consensus 80 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 159 (843)
+|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+++
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 45555555555554444455555555555555555555555555555555555555555554333345555555555555
Q ss_pred cCcccccCC-CCccCCCCccEEEcccC-CcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceec
Q 003156 160 NNTLTGDIP-HWIGNISTLEFLDFSNN-HLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGS 237 (843)
Q Consensus 160 ~N~l~~~~p-~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~ 237 (843)
+|+++...+ ..|.++++|++|++++| .++...+..|..+++|+.|++++|.++
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~------------------------- 187 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ------------------------- 187 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC-------------------------
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC-------------------------
Confidence 555543222 24445555555555554 233333344444444444444444443
Q ss_pred CCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCC
Q 003156 238 IPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIP 317 (843)
Q Consensus 238 ~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 317 (843)
+..|..+..+++|++|++++|.++...+..+..+++|++|++++|++++..+
T Consensus 188 ----------------------------~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 239 (353)
T 2z80_A 188 ----------------------------SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHF 239 (353)
T ss_dssp ----------------------------EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCC
T ss_pred ----------------------------ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccc
Confidence 3333333334444444444444332211122233444444444444443222
Q ss_pred ccc---cccCCCcEEEcCCCCCCC----CchhhhcccCCCcEEecccccccccCCcc-ccCCCCCCEEEccCCccccc
Q 003156 318 QEV---CESRSLGILQLDGNSLTG----PIPQVIRNCTSLYLLSLSHNHLSGSIPKS-ISNLNKLKILKLEFNELSGE 387 (843)
Q Consensus 318 ~~~---~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~ 387 (843)
..+ .....++.++|++|.+++ .+|..+.++++|+.|+|++|+++ .+|.. |.++++|++|+|++|++++.
T Consensus 240 ~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 240 SELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp C------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 221 123345555555555543 24555666666666666666666 34443 46666666666666666643
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.8e-29 Score=267.85 Aligned_cols=275 Identities=20% Similarity=0.223 Sum_probs=163.4
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCccccc--CCchhhcccCCcEEEee
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQ--LPVSLRLLNSMIFISVS 159 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~ 159 (843)
+.++++++.++ .+|..+ .++|++|+|++|+++...+..|..+++|++|+|++|.++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46677777776 344433 24677777777777655445566777777777777766632 13444445555555555
Q ss_pred cCcccccCCCCccCCCCccEEEcccCCcCCCCC-CCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecC
Q 003156 160 NNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLP-SSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSI 238 (843)
Q Consensus 160 ~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~ 238 (843)
+|.+. .+|..+..+++|++|++++|.+++..+ ..+..+
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l---------------------------------------- 125 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL---------------------------------------- 125 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTC----------------------------------------
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhc----------------------------------------
Confidence 55554 233334444555555555544443222 233333
Q ss_pred CCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccC-CCCCCccccccceEEEccCCcccccCC
Q 003156 239 PPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRS-RIPPELGYFHSLIHLDLRNNALYGSIP 317 (843)
Q Consensus 239 p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~ 317 (843)
++|++|++++|.+.+..+..+..+++|++|++++|.+++ ..|..+..+++|++|++++|++++..|
T Consensus 126 -------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 192 (306)
T 2z66_A 126 -------------RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 192 (306)
T ss_dssp -------------TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred -------------cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCH
Confidence 445555555555554555555555666666666666654 345566666666666666666666666
Q ss_pred ccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCC-CCCEEEccCCcccccCC--cchhc
Q 003156 318 QEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLN-KLKILKLEFNELSGEIP--QELGK 394 (843)
Q Consensus 318 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p--~~~~~ 394 (843)
..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..++ +|++|+|++|++++..+ ....-
T Consensus 193 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~ 272 (306)
T 2z66_A 193 TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQW 272 (306)
T ss_dssp TTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHH
T ss_pred HHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHH
Confidence 6667777777777777777766666677777777777777777777777777774 77777777777775432 11222
Q ss_pred ccccceEeeccccceecCC
Q 003156 395 LASLLAVNVSYNRLIGRLP 413 (843)
Q Consensus 395 l~~L~~l~ls~N~l~~~~p 413 (843)
+...+.+.+..|.+.+..|
T Consensus 273 l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 273 IKDQRQLLVEVERMECATP 291 (306)
T ss_dssp HHHTGGGBSCGGGCBEEES
T ss_pred HHhhhhhhccccccccCCc
Confidence 3344455556666666665
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.4e-29 Score=268.34 Aligned_cols=281 Identities=20% Similarity=0.181 Sum_probs=207.0
Q ss_pred CCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCccccc--CCCCCCCCCCCc
Q 003156 53 LNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGP--LPADIGFCPHLT 130 (843)
Q Consensus 53 L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~ 130 (843)
-+.++++++.++..+... .++|++|+|++|+++...+..|..+++|++|+|++|.++.. .+..+..+++|+
T Consensus 9 ~~~l~c~~~~l~~ip~~~-------~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 81 (306)
T 2z66_A 9 GTEIRCNSKGLTSVPTGI-------PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLK 81 (306)
T ss_dssp TTEEECCSSCCSSCCSCC-------CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCC
T ss_pred CCEEEcCCCCcccCCCCC-------CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccC
Confidence 368999999998765432 26899999999999976666789999999999999999843 255667799999
Q ss_pred EEEccCCcccccCCchhhcccCCcEEEeecCcccccCC-CCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCC
Q 003156 131 TLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIP-HWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGN 209 (843)
Q Consensus 131 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 209 (843)
+|+|++|.++ .+|..+..+++|++|++++|++.+..+ ..+..+++|++|++++|.+++..+..+..+++|+.|++++|
T Consensus 82 ~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 82 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 9999999998 466679999999999999999996655 68999999999999999999888888888899999998888
Q ss_pred cCCC-CCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcc
Q 003156 210 SLNG-NIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHL 288 (843)
Q Consensus 210 ~l~~-~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 288 (843)
.+.+ .+|..+ ..+++|++|+|++|++++..|..+..+++|++|++++|.+
T Consensus 161 ~l~~~~~~~~~-----------------------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 161 SFQENFLPDIF-----------------------------TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp EEGGGEECSCC-----------------------------TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred ccccccchhHH-----------------------------hhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCcc
Confidence 8763 222211 2356777777777777776677777777777777777777
Q ss_pred cCCCCCCccccccceEEEccCCcccccCCccccccC-CCcEEEcCCCCCCCCch--hhhcccCCCcEEecccccccccCC
Q 003156 289 RSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESR-SLGILQLDGNSLTGPIP--QVIRNCTSLYLLSLSHNHLSGSIP 365 (843)
Q Consensus 289 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p 365 (843)
++..+..+..+++|++|++++|++++..|..+..++ +|+.|+|++|.+++..+ .....+..++.+....+.+....|
T Consensus 212 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 212 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp SBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred CccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 766555666666677777777766666666666663 66666666666654321 112223334444444455554445
Q ss_pred ccccC
Q 003156 366 KSISN 370 (843)
Q Consensus 366 ~~~~~ 370 (843)
..+.+
T Consensus 292 ~~~~g 296 (306)
T 2z66_A 292 SDKQG 296 (306)
T ss_dssp GGGTT
T ss_pred hhhCC
Confidence 44433
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.2e-28 Score=264.78 Aligned_cols=233 Identities=22% Similarity=0.300 Sum_probs=155.5
Q ss_pred CCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEe
Q 003156 127 PHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRL 206 (843)
Q Consensus 127 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 206 (843)
++++.|+|++|.++ .+|..+..+++|++|+|++|+++ .+|..|+++++|++|+|++|.++ .+|..+.++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45566666666665 44555555666666666666666 56666666667777777777666 55666666777777777
Q ss_pred cCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCC
Q 003156 207 RGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSN 286 (843)
Q Consensus 207 ~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 286 (843)
++|.+.+.+|..+... ..+..+..+++|++|++++|
T Consensus 158 ~~n~~~~~~p~~~~~~--------------------------------------------~~~~~~~~l~~L~~L~L~~n 193 (328)
T 4fcg_A 158 RACPELTELPEPLAST--------------------------------------------DASGEHQGLVNLQSLRLEWT 193 (328)
T ss_dssp EEETTCCCCCSCSEEE--------------------------------------------C-CCCEEESTTCCEEEEEEE
T ss_pred CCCCCccccChhHhhc--------------------------------------------cchhhhccCCCCCEEECcCC
Confidence 7766655555433211 11122444556666666666
Q ss_pred cccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCc
Q 003156 287 HLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPK 366 (843)
Q Consensus 287 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 366 (843)
.++ .+|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|.+.+.+|..|+++++|+.|+|++|++.+.+|.
T Consensus 194 ~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~ 271 (328)
T 4fcg_A 194 GIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPL 271 (328)
T ss_dssp CCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCT
T ss_pred CcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcch
Confidence 665 44555666666666677777766 3555677777777777777777777777777777777777777777777777
Q ss_pred cccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccc
Q 003156 367 SISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRL 408 (843)
Q Consensus 367 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l 408 (843)
.+.++++|++|+|++|++.+.+|..+++|++|+.+++..|.+
T Consensus 272 ~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 272 DIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred hhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 777778888888888777777888888888888777776654
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.9e-28 Score=273.64 Aligned_cols=246 Identities=22% Similarity=0.225 Sum_probs=132.8
Q ss_pred CEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccC
Q 003156 106 KELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNN 185 (843)
Q Consensus 106 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 185 (843)
..++.+++.++ .+|..+. ++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 34444444444 2333221 34555555555555444455555555555555555555444555555555555555555
Q ss_pred CcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCC-Ccc
Q 003156 186 HLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSS-NNL 264 (843)
Q Consensus 186 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~-n~l 264 (843)
+++...+..|..+++|++|+|++|.++. +|... +..+++|+.|+|++ |.+
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~----------------------------~~~l~~L~~L~l~~~~~l 184 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIES-IPSYA----------------------------FNRVPSLMRLDLGELKKL 184 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCE-ECTTT----------------------------TTTCTTCCEEECCCCTTC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcce-eCHhH----------------------------HhcCCcccEEeCCCCCCc
Confidence 5554444445555555555555555541 11111 01234555555555 333
Q ss_pred ceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhh
Q 003156 265 VGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVI 344 (843)
Q Consensus 265 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 344 (843)
....+..|..+++|++|++++|.+++. ..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|
T Consensus 185 ~~i~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 262 (452)
T 3zyi_A 185 EYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 262 (452)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSSC--CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccChhhccCCCCCCEEECCCCccccc--ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHh
Confidence 333344566677777777777777643 235555666666666666665555566666666666666666665555556
Q ss_pred cccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc
Q 003156 345 RNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 345 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 263 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 263 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred cCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 66666666666666666544455555666666666666554
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.2e-28 Score=272.40 Aligned_cols=247 Identities=23% Similarity=0.242 Sum_probs=139.9
Q ss_pred CCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcc
Q 003156 104 YLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFS 183 (843)
Q Consensus 104 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 183 (843)
..+.++.+++.++ .+|..+. ++++.|+|++|+++...+..|..+++|++|+|++|++.+..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3567777777777 4555443 567777777777777667777777777777777777776666677777777777777
Q ss_pred cCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCC-C
Q 003156 184 NNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSS-N 262 (843)
Q Consensus 184 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~-n 262 (843)
+|+++...+..|..+++|+.|+|++|.++...+..+ ..+++|++|+|++ |
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-----------------------------~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAF-----------------------------NRIPSLRRLDLGELK 171 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTT-----------------------------TTCTTCCEEECCCCT
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHh-----------------------------hhCcccCEeCCCCCC
Confidence 777775555566677777777777666652111111 1245566666665 3
Q ss_pred ccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchh
Q 003156 263 NLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQ 342 (843)
Q Consensus 263 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 342 (843)
.+....+..|..+++|++|++++|.++.+ | .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+.
T Consensus 172 ~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 249 (440)
T 3zyj_A 172 RLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERN 249 (440)
T ss_dssp TCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTT
T ss_pred CcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChh
Confidence 33333334455555666666666655532 2 244444444444444444444444444444444444444444444444
Q ss_pred hhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcc
Q 003156 343 VIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNEL 384 (843)
Q Consensus 343 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 384 (843)
.|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+
T Consensus 250 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 250 AFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp SSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred hhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 444444444444444444433333444444444444444444
No 306
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.3e-27 Score=276.13 Aligned_cols=269 Identities=27% Similarity=0.262 Sum_probs=177.1
Q ss_pred CCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCC
Q 003156 27 ASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLK 106 (843)
Q Consensus 27 ~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 106 (843)
.+++.|++++|+|+.++...+ ++|++|+|++|.|+.++. .+++|++|+|++|+|++ +|. .+++|+
T Consensus 40 ~~l~~L~ls~n~L~~lp~~l~---~~L~~L~L~~N~l~~lp~--------~l~~L~~L~Ls~N~l~~-lp~---~l~~L~ 104 (622)
T 3g06_A 40 NGNAVLNVGESGLTTLPDCLP---AHITTLVIPDNNLTSLPA--------LPPELRTLEVSGNQLTS-LPV---LPPGLL 104 (622)
T ss_dssp HCCCEEECCSSCCSCCCSCCC---TTCSEEEECSCCCSCCCC--------CCTTCCEEEECSCCCSC-CCC---CCTTCC
T ss_pred CCCcEEEecCCCcCccChhhC---CCCcEEEecCCCCCCCCC--------cCCCCCEEEcCCCcCCc-CCC---CCCCCC
Confidence 346666666666666655443 566666666666664332 24666777777776663 333 556677
Q ss_pred EEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCC
Q 003156 107 ELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNH 186 (843)
Q Consensus 107 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 186 (843)
+|+|++|.+++. |. .+++|+.|++++|+++.+ |.. +++|++|+|++|++++ +|. .+++|+.|++++|.
T Consensus 105 ~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~ 172 (622)
T 3g06_A 105 ELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQ 172 (622)
T ss_dssp EEEECSCCCCCC-CC---CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEECcCCcCCCC-CC---CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCC
Confidence 777777776643 32 456677777777777643 332 3667777777777763 343 24567788888888
Q ss_pred cCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccce
Q 003156 187 LTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVG 266 (843)
Q Consensus 187 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~ 266 (843)
++. +| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++
T Consensus 173 l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~--------------------------------~~~L~~L~L~~N~l~- 214 (622)
T 3g06_A 173 LTS-LP---MLPSGLQELSVSDNQLAS-LPTL--------------------------------PSELYKLWAYNNRLT- 214 (622)
T ss_dssp CSC-CC---CCCTTCCEEECCSSCCSC-CCCC--------------------------------CTTCCEEECCSSCCS-
T ss_pred CCC-Cc---ccCCCCcEEECCCCCCCC-CCCc--------------------------------cchhhEEECcCCccc-
Confidence 874 44 445777788888777762 3321 245666666666666
Q ss_pred eCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcc
Q 003156 267 DIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRN 346 (843)
Q Consensus 267 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 346 (843)
.+|.. +++|++|++++|.|+++ | ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|.|+ .+|..|.+
T Consensus 215 ~l~~~---~~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~ 282 (622)
T 3g06_A 215 SLPAL---PSGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIH 282 (622)
T ss_dssp SCCCC---CTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGG
T ss_pred ccCCC---CCCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhh
Confidence 34432 35677777777777653 3 34467788888888887 4554 5678888888888888 67788888
Q ss_pred cCCCcEEecccccccccCCccccCCC
Q 003156 347 CTSLYLLSLSHNHLSGSIPKSISNLN 372 (843)
Q Consensus 347 l~~L~~L~Ls~N~l~~~~p~~~~~l~ 372 (843)
+++|+.|+|++|.+++..|..+..++
T Consensus 283 l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 283 LSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ccccCEEEecCCCCCCcCHHHHHhcc
Confidence 88888888888888888888776664
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1e-27 Score=270.30 Aligned_cols=248 Identities=21% Similarity=0.157 Sum_probs=197.0
Q ss_pred CCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeec
Q 003156 81 LRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSN 160 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 160 (843)
...++.+++.++ .+|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456677777776 3444332 4677777777777777777777777777777777777777777777777777777777
Q ss_pred CcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCC
Q 003156 161 NTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPP 240 (843)
Q Consensus 161 N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~ 240 (843)
|+++...+..|.++++|++|+|++|+++...+..|.++++|+.|++++|...+.++...
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~--------------------- 191 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGA--------------------- 191 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTT---------------------
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhh---------------------
Confidence 77776666677778888888888888876666677888888888887744332333221
Q ss_pred CCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccc
Q 003156 241 GSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEV 320 (843)
Q Consensus 241 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 320 (843)
+..+++|++|+|++|++++ +| .+..+++|++|+|++|.|++..|..|..+++|++|+|++|++++..+..|
T Consensus 192 -------~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 262 (452)
T 3zyi_A 192 -------FEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 262 (452)
T ss_dssp -------TTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTT
T ss_pred -------ccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHh
Confidence 1235778888888888874 44 47889999999999999999999999999999999999999999989999
Q ss_pred cccCCCcEEEcCCCCCCCCchhhhcccCCCcEEeccccccc
Q 003156 321 CESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLS 361 (843)
Q Consensus 321 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 361 (843)
..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 263 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 263 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred cCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 99999999999999999888888999999999999999987
No 308
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=5.1e-30 Score=274.65 Aligned_cols=267 Identities=21% Similarity=0.223 Sum_probs=205.0
Q ss_pred CCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEccc
Q 003156 105 LKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSN 184 (843)
Q Consensus 105 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 184 (843)
++.++++.+.+.......+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+ |..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4445666666654444445556677777777777776666667777777777777777765443 66667777777777
Q ss_pred CCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCcc
Q 003156 185 NHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNL 264 (843)
Q Consensus 185 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l 264 (843)
|++++.. ..++|+.|++++|.++ +..+. .+++|++|++++|++
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~-----------------------~~~~~---------~~~~L~~L~l~~N~l 132 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNIS-----------------------RVSCS---------RGQGKKNIYLANNKI 132 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCS-----------------------EEEEC---------CCSSCEEEECCSSCC
T ss_pred Ccccccc-----CCCCcCEEECCCCccC-----------------------CcCcc---------ccCCCCEEECCCCCC
Confidence 7666321 2256666666666655 22211 256799999999999
Q ss_pred ceeCCccccCCCCCcEEEcCCCcccCCCCCCc-cccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhh
Q 003156 265 VGDIPAEMGLFANLRYLNLSSNHLRSRIPPEL-GYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQV 343 (843)
Q Consensus 265 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 343 (843)
++..+..+..+++|++|++++|.+++..+..+ ..+++|++|+|++|++++. + ....+++|+.|+|++|++++ +|..
T Consensus 133 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~ 209 (317)
T 3o53_A 133 TMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPE 209 (317)
T ss_dssp CSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGG
T ss_pred CCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhh
Confidence 98888889999999999999999998777766 4789999999999999965 3 33458999999999999995 5556
Q ss_pred hcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc-ccCCcchhcccccceEeec-cccceecCCC
Q 003156 344 IRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS-GEIPQELGKLASLLAVNVS-YNRLIGRLPV 414 (843)
Q Consensus 344 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~ls-~N~l~~~~p~ 414 (843)
|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..++.|+.++++ .+.++|..|.
T Consensus 210 ~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 210 FQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp GGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred hcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 999999999999999999 67888999999999999999999 8889999999999999999 5557776663
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.6e-28 Score=257.41 Aligned_cols=123 Identities=20% Similarity=0.237 Sum_probs=54.0
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecC
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNN 161 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 161 (843)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 44555555554 233222 234555555555555444444555555555555555554444444444444444444444
Q ss_pred c-ccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEec
Q 003156 162 T-LTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLR 207 (843)
Q Consensus 162 ~-l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 207 (843)
+ +....|..|..+++|++|+|++|.+++..+..|.++++|++|+++
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 137 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECC
Confidence 3 333333334444444444444444433333333333333333333
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.1e-27 Score=269.09 Aligned_cols=248 Identities=22% Similarity=0.182 Sum_probs=165.7
Q ss_pred CCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeec
Q 003156 81 LRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSN 160 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 160 (843)
.+.++.+++.++ .+|..+. ++++.|+|++|+++...+..|.++++|++|+|++|.++...+..|..+++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 445666666665 3444332 4566666666666666666666666666666666666666666666666666666666
Q ss_pred CcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCC
Q 003156 161 NTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPP 240 (843)
Q Consensus 161 N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~ 240 (843)
|+++...+..|..+++|++|+|++|+++...+..|.++++|+.|+|++|...+.++...+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~-------------------- 181 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAF-------------------- 181 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTT--------------------
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchh--------------------
Confidence 666655555666677777777777777665555666777777777766433223322111
Q ss_pred CCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccc
Q 003156 241 GSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEV 320 (843)
Q Consensus 241 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 320 (843)
..+++|++|+|++|+++ .+| .+..+++|++|+|++|.|+++.|..|..+++|+.|+|++|++++..+..|
T Consensus 182 --------~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 251 (440)
T 3zyj_A 182 --------EGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAF 251 (440)
T ss_dssp --------TTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSS
T ss_pred --------hcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhh
Confidence 22456666666666666 344 35667777777777777777777777777777777777777777777777
Q ss_pred cccCCCcEEEcCCCCCCCCchhhhcccCCCcEEeccccccc
Q 003156 321 CESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLS 361 (843)
Q Consensus 321 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 361 (843)
..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 252 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 252 DNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred cCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 78888888888888888777777788888888888888775
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.9e-28 Score=256.04 Aligned_cols=133 Identities=20% Similarity=0.201 Sum_probs=69.3
Q ss_pred ccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCc-ccccCCchhhcccCCcEEE
Q 003156 79 KRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNL-FTGQLPVSLRLLNSMIFIS 157 (843)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ 157 (843)
++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|++++|. ++...+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 345555555555554444455555555555555555555445555555555555555554 4444455555555555555
Q ss_pred eecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcC
Q 003156 158 VSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSL 211 (843)
Q Consensus 158 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 211 (843)
+++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 165 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcc
Confidence 555555544455555555555555555555543333344444444444444433
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.9e-27 Score=273.06 Aligned_cols=268 Identities=28% Similarity=0.347 Sum_probs=150.3
Q ss_pred CCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcE
Q 003156 52 SLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTT 131 (843)
Q Consensus 52 ~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 131 (843)
++++|++++|.++.++... . ++|++|+|++|+|+. +|. .+++|++|+|++|+|++ +|. .+++|++
T Consensus 41 ~l~~L~ls~n~L~~lp~~l-----~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~ 105 (622)
T 3g06_A 41 GNAVLNVGESGLTTLPDCL-----P--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLE 105 (622)
T ss_dssp CCCEEECCSSCCSCCCSCC-----C--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCE
T ss_pred CCcEEEecCCCcCccChhh-----C--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCE
Confidence 4666666666666443321 1 456666666666653 333 35566666666666653 332 4556666
Q ss_pred EEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcC
Q 003156 132 LDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSL 211 (843)
Q Consensus 132 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 211 (843)
|+|++|.+++..+ .+++|+.|++++|+++. +|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+
T Consensus 106 L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l 173 (622)
T 3g06_A 106 LSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQL 173 (622)
T ss_dssp EEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCC
Confidence 6666666654322 34455555555555552 3322 2445555555555542 222 123444444444444
Q ss_pred CCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCC
Q 003156 212 NGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSR 291 (843)
Q Consensus 212 ~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 291 (843)
++ + | ..+++|+.|++++|.+++ +|.. +++|+.|++++|.|+.+
T Consensus 174 ~~-l-----------------------~---------~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l 216 (622)
T 3g06_A 174 TS-L-----------------------P---------MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL 216 (622)
T ss_dssp SC-C-----------------------C---------CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC
T ss_pred CC-C-----------------------c---------ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc
Confidence 41 1 1 114567777777777763 4432 35677777777777643
Q ss_pred CCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCC
Q 003156 292 IPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNL 371 (843)
Q Consensus 292 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 371 (843)
|. .+++|+.|+|++|+|++ +| ..+++|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+ .+|..|.++
T Consensus 217 -~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l 283 (622)
T 3g06_A 217 -PA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHL 283 (622)
T ss_dssp -CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGS
T ss_pred -CC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhc
Confidence 22 23566777777777764 44 34466677777777666 3443 4566667777777666 556666666
Q ss_pred CCCCEEEccCCcccccCCcchhccc
Q 003156 372 NKLKILKLEFNELSGEIPQELGKLA 396 (843)
Q Consensus 372 ~~L~~L~L~~N~l~~~~p~~~~~l~ 396 (843)
++|+.|+|++|++++.+|..+..++
T Consensus 284 ~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 284 SSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cccCEEEecCCCCCCcCHHHHHhcc
Confidence 7777777777777666666665554
No 313
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1e-27 Score=257.46 Aligned_cols=232 Identities=19% Similarity=0.265 Sum_probs=103.9
Q ss_pred ccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEe
Q 003156 79 KRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISV 158 (843)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 158 (843)
.+++.|+|++|.+. .+|..+..+++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..|..+++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 34445555555554 33444444555555555555544 44444444555555555555444 33444444444444444
Q ss_pred ecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecC
Q 003156 159 SNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSI 238 (843)
Q Consensus 159 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~ 238 (843)
++|++.+.+|..+... ..+..|.++++|++|+|++|.++ .+|..+.
T Consensus 158 ~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~------------------ 203 (328)
T 4fcg_A 158 RACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIA------------------ 203 (328)
T ss_dssp EEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGG------------------
T ss_pred CCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhc------------------
Confidence 4444444444333220 00111223555666665555554 3333221
Q ss_pred CCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCc
Q 003156 239 PPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQ 318 (843)
Q Consensus 239 p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 318 (843)
.+++|++|+|++|+++ .+|..+..+++|++|++++|.+.+..|..+..+++|++|+|++|.+.+.+|.
T Consensus 204 -----------~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~ 271 (328)
T 4fcg_A 204 -----------NLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPL 271 (328)
T ss_dssp -----------GCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCT
T ss_pred -----------CCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcch
Confidence 1234444444444444 2333444444555555555444444444444444444444444444444444
Q ss_pred cccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEeccccc
Q 003156 319 EVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNH 359 (843)
Q Consensus 319 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 359 (843)
.+..+++|+.|+|++|.+.+.+|..++++++|+.+++..|.
T Consensus 272 ~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 272 DIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp TGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred hhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 44444444444444444444444444444444444444333
No 314
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=4.2e-31 Score=309.40 Aligned_cols=377 Identities=14% Similarity=0.038 Sum_probs=239.0
Q ss_pred hcCCCCcEEEccCccccccccccccC-CC-CCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCccc----Cch
Q 003156 24 ENCASLRYLSLAGNILQGPIGKIFNY-CS-SLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGS----IPQ 97 (843)
Q Consensus 24 ~~l~~L~~L~L~~n~i~~~~~~~f~~-l~-~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~ 97 (843)
..+++|++|+|++|.+.......+.. ++ +|++|+|++|.-.. ..........+++|++|+|++|.+.+. ++.
T Consensus 109 ~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~--~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~ 186 (592)
T 3ogk_B 109 NNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT--TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHE 186 (592)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE--HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHH
T ss_pred hhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC--HHHHHHHHhhCCCCCEEECccccccCcchhHHHH
Confidence 36777777777777766544444433 23 37777777765110 000011123567788888888777644 333
Q ss_pred hhhcCCCCCEEEcCCCccc----ccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCccc---ccCCCC
Q 003156 98 GVAALHYLKELLLQGNQFS----GPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLT---GDIPHW 170 (843)
Q Consensus 98 ~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~p~~ 170 (843)
.+..+++|++|+|++|.++ ..++..+.++++|++|++++|.+.+ .+..+..+++|+.|+++.+... ...+..
T Consensus 187 ~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 265 (592)
T 3ogk_B 187 LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMN 265 (592)
T ss_dssp HHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSC
T ss_pred HHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHH
Confidence 4566777888888777775 2233344567778888888877774 5567777778888877754332 233445
Q ss_pred ccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCch-hhcc-CcceeeccCCccee-cCCCCCCCCCc
Q 003156 171 IGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEG-LFDL-GLEEIDLSENGFMG-SIPPGSSSSSS 247 (843)
Q Consensus 171 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~-~L~~L~l~~n~l~~-~~p~~~~~~~~ 247 (843)
+..+++|+.|+++++... .+|..+..+++|++|+|++|.+++..... +... +|+.|+++ +.+.. .++. .
T Consensus 266 l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~------~ 337 (592)
T 3ogk_B 266 LVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEV------L 337 (592)
T ss_dssp CCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHH------H
T ss_pred hhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHH------H
Confidence 667777888877775443 56666777778888888888765333222 2222 67778777 33321 1110 1
Q ss_pred ccccCccCEEeCCC-----------CccceeC-CccccCCCCCcEEEcCCCcccCCCCCCccc-cccceEEEcc----CC
Q 003156 248 STLFQTLRILDLSS-----------NNLVGDI-PAEMGLFANLRYLNLSSNHLRSRIPPELGY-FHSLIHLDLR----NN 310 (843)
Q Consensus 248 ~~~l~~L~~L~L~~-----------n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~n 310 (843)
...+++|++|++++ |.+++.. +..+..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|
T Consensus 338 ~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n 417 (592)
T 3ogk_B 338 AQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREE 417 (592)
T ss_dssp HHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCS
T ss_pred HHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCc
Confidence 12356788888883 5555332 222345778888888878777654444444 6778888885 66
Q ss_pred ccccc-----CCccccccCCCcEEEcCCC--CCCCCchhhhcc-cCCCcEEecccccccc-cCCccccCCCCCCEEEccC
Q 003156 311 ALYGS-----IPQEVCESRSLGILQLDGN--SLTGPIPQVIRN-CTSLYLLSLSHNHLSG-SIPKSISNLNKLKILKLEF 381 (843)
Q Consensus 311 ~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~ 381 (843)
.+++. ++..+..+++|+.|++++| .+++..+..+.. +++|+.|+|++|++++ .++..+..+++|+.|+|++
T Consensus 418 ~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~ 497 (592)
T 3ogk_B 418 RITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRG 497 (592)
T ss_dssp CCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEES
T ss_pred cccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccC
Confidence 77643 2333566788888888754 366655555554 7888888888888875 3455557788888888888
Q ss_pred Cccccc-CCcchhcccccceEeeccccceec
Q 003156 382 NELSGE-IPQELGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 382 N~l~~~-~p~~~~~l~~L~~l~ls~N~l~~~ 411 (843)
|.+++. ++..+..+++|+.|++++|+++..
T Consensus 498 n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 498 CCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 888755 344456788888888888887643
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.8e-29 Score=267.03 Aligned_cols=258 Identities=20% Similarity=0.183 Sum_probs=171.9
Q ss_pred CccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCC
Q 003156 3 NMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLR 82 (843)
Q Consensus 3 ~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~ 82 (843)
.++.++++.+.+. ..+...|..+++|++|+|++|+|.++.+..|..+++|++|+|++|++++.++ +..+++|+
T Consensus 11 ~l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~------~~~l~~L~ 83 (317)
T 3o53_A 11 RYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD------LESLSTLR 83 (317)
T ss_dssp EEEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE------ETTCTTCC
T ss_pred ceeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh------hhhcCCCC
Confidence 3667788888887 6777788888899999999999998888888999999999999998876432 67788899
Q ss_pred EEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCc
Q 003156 83 TLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNT 162 (843)
Q Consensus 83 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 162 (843)
+|+|++|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..|..+++|++|+|++|+
T Consensus 84 ~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (317)
T 3o53_A 84 TLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (317)
T ss_dssp EEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSC
T ss_pred EEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCC
Confidence 9999998887432 3478888888888887655443 5678888888888877666677777777777777777
Q ss_pred ccccCCCCcc-CCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCC
Q 003156 163 LTGDIPHWIG-NISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPG 241 (843)
Q Consensus 163 l~~~~p~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~ 241 (843)
+.+..+..+. .+++|++|+|++|.+++. + ....+++|+.|+|++|.+++ +|..+.
T Consensus 156 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~--------------------- 211 (317)
T 3o53_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQ--------------------- 211 (317)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGG---------------------
T ss_pred CCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhc---------------------
Confidence 7765555543 566777777777766643 2 22235566666666665552 222211
Q ss_pred CCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCccc-CCCCCCccccccceEEEcc
Q 003156 242 SSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLR-SRIPPELGYFHSLIHLDLR 308 (843)
Q Consensus 242 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~ 308 (843)
.+++|+.|+|++|+++ .+|..+..+++|+.|++++|.+. +..+..+..+++|+.|+++
T Consensus 212 --------~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 212 --------SAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp --------GGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred --------ccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 1344555555555555 34444555555555555555554 3334444444455555554
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3e-29 Score=268.00 Aligned_cols=252 Identities=23% Similarity=0.234 Sum_probs=175.1
Q ss_pred CCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCccc-ccCCCCcc-------CCCCccEEEcccCCcCCCCCCCC-
Q 003156 125 FCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLT-GDIPHWIG-------NISTLEFLDFSNNHLTGSLPSSL- 195 (843)
Q Consensus 125 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~i~~~~~~~~- 195 (843)
..++|+.|++++|.+ ..|..+... |+.|+|++|++. ..+|..+. ++++|++|+|++|++++..|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 344555566666665 344444433 555666666653 23444333 56777777777777777667665
Q ss_pred -CCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccC
Q 003156 196 -FNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGL 274 (843)
Q Consensus 196 -~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 274 (843)
..+++|++|+|++|.+++. |..+.... . ..+++|++|+|++|++.+..|..|+.
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~----------------~--------~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQ----------------Q--------WLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHH----------------T--------TCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHH----------------H--------hhcCCCcEEEeeCCCCccchHHHhcc
Confidence 6777777777777777754 54443210 0 01256777777777777766677788
Q ss_pred CCCCcEEEcCCCcccCC--CCCC--ccccccceEEEccCCcccc---cCCccccccCCCcEEEcCCCCCCCCch-hhhcc
Q 003156 275 FANLRYLNLSSNHLRSR--IPPE--LGYFHSLIHLDLRNNALYG---SIPQEVCESRSLGILQLDGNSLTGPIP-QVIRN 346 (843)
Q Consensus 275 l~~L~~L~L~~N~l~~~--~~~~--~~~l~~L~~L~L~~n~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 346 (843)
+++|++|++++|++.+. .+.. +..+++|++|+|++|++++ .....+..+++|+.|+|++|++++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 88888888888876543 1222 3677888888888888873 122334577889999999999987665 45667
Q ss_pred cCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeecccccee
Q 003156 347 CTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIG 410 (843)
Q Consensus 347 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 410 (843)
+++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 889999999999998 7787776 8899999999999865 65 8889999999999998875
No 317
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.5e-30 Score=301.53 Aligned_cols=398 Identities=14% Similarity=0.061 Sum_probs=290.4
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCC-CcEEEccCcc-ccc-cccccccCCCCCCEEECCCCCCccccCCCcCccccC
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCAS-LRYLSLAGNI-LQG-PIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWS 77 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~-L~~L~L~~n~-i~~-~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~ 77 (843)
+++|++|+|++|.+++..+..+...++. |++|+|++|. +.. .......++++|++|+|++|.+++.........+..
T Consensus 111 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~ 190 (592)
T 3ogk_B 111 LRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQH 190 (592)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHH
T ss_pred CCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhc
Confidence 4689999999999885544433232445 9999999987 321 122334578999999999998764321101113456
Q ss_pred CccCCEEecCCccCc----ccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCccc---ccCCchhhcc
Q 003156 78 LKRLRTLDLSHNLFS----GSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFT---GQLPVSLRLL 150 (843)
Q Consensus 78 l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~~~~~~~l 150 (843)
+++|++|+|++|.++ ..++..+..+++|++|+|++|.+.+ .+..+..+++|++|+++.+... ...+..+..+
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~ 269 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFP 269 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCC
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcc
Confidence 899999999999997 3455567789999999999999985 5677888999999999864433 2334567788
Q ss_pred cCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCC-CCCCCCCCCcEEEecCCcCCCCCCchh-hcc-Cccee
Q 003156 151 NSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLP-SSLFNCKKLSVIRLRGNSLNGNIPEGL-FDL-GLEEI 227 (843)
Q Consensus 151 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~~-~L~~L 227 (843)
++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++ +.+.......+ ... +|+.|
T Consensus 270 ~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L 347 (592)
T 3ogk_B 270 RKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRL 347 (592)
T ss_dssp TTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEE
T ss_pred ccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEE
Confidence 99999999987544 677888899999999999999765332 346789999999999 44443222222 222 69999
Q ss_pred eccC-----------CcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccC-CCCCcEEEcC----CCcccCC
Q 003156 228 DLSE-----------NGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGL-FANLRYLNLS----SNHLRSR 291 (843)
Q Consensus 228 ~l~~-----------n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~ 291 (843)
++++ |.+.+.... .....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++.
T Consensus 348 ~L~~g~~~~~~~~~~~~~~~~~~~-----~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~ 422 (592)
T 3ogk_B 348 RIERGADEQGMEDEEGLVSQRGLI-----ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDL 422 (592)
T ss_dssp EEECCCCSSTTSSTTCCCCHHHHH-----HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSC
T ss_pred EeecCccccccccccCccCHHHHH-----HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCc
Confidence 9993 455422100 01234689999999999998877777765 8999999996 7788753
Q ss_pred C-----CCCccccccceEEEccCCc--ccccCCccccc-cCCCcEEEcCCCCCCC-CchhhhcccCCCcEEecccccccc
Q 003156 292 I-----PPELGYFHSLIHLDLRNNA--LYGSIPQEVCE-SRSLGILQLDGNSLTG-PIPQVIRNCTSLYLLSLSHNHLSG 362 (843)
Q Consensus 292 ~-----~~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~ 362 (843)
. +..+..+++|++|++++|. +++..+..+.. +++|+.|++++|.+++ .++..+.++++|+.|+|++|.+++
T Consensus 423 p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 423 PLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred hHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 2 2236678999999998543 66555555544 8899999999999986 345667889999999999999875
Q ss_pred c-CCccccCCCCCCEEEccCCcccccCCcch-hcccccceEeeccc
Q 003156 363 S-IPKSISNLNKLKILKLEFNELSGEIPQEL-GKLASLLAVNVSYN 406 (843)
Q Consensus 363 ~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~l~ls~N 406 (843)
. ++..+..+++|++|+|++|++++.-...+ ..++.+....+..+
T Consensus 503 ~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 503 RAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 5 44445689999999999999986644434 35666666655554
No 318
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.2e-28 Score=282.94 Aligned_cols=188 Identities=14% Similarity=0.050 Sum_probs=132.7
Q ss_pred eeccccceEEEEEEECCCCeEEEEEEeecCCcc---------cChHHHHHHHHHHHhc-cCCCccceeeEEEcCCeeEEE
Q 003156 561 EVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII---------QYPEDFEREVRVLGKA-RHPNLISLEGYYWTPQLKLLV 630 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV 630 (843)
..+.|++|.+..++....|+.||+|.+...... ...++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456777777776666557889999999654321 1235689999999999 699999999999999999999
Q ss_pred EEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 631 SDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 631 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
|||++||+|.++|... .+++.. +|+.||+.||+|+|++ +||||||||+|||+++++.+||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999999875 345543 5899999999999999 99999999999999999999999999998765
Q ss_pred ccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCC
Q 003156 711 RLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPV 762 (843)
Q Consensus 711 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~ 762 (843)
.... ......||++|||||++. + .+..++|+||+|++++++.++..++
T Consensus 391 ~~~~--~~~t~vGTp~YmAPE~l~-g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCS--WPTNLVQSFFVFVNELFA-E-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---C--CSHHHHHHHHHHHHHHC-------------------CCCCTTHHHH
T ss_pred CCCc--cccCceechhhccHHHhC-C-CCCCcccccccccchhhhccccchh
Confidence 3222 224567999999999883 2 4677899999999988876655443
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=8.6e-29 Score=264.46 Aligned_cols=134 Identities=21% Similarity=0.247 Sum_probs=77.0
Q ss_pred cccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCc-ccCchhhh-------cCCCCCEEEcCCCcccc
Q 003156 46 IFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFS-GSIPQGVA-------ALHYLKELLLQGNQFSG 117 (843)
Q Consensus 46 ~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~-------~l~~L~~L~L~~n~l~~ 117 (843)
.+...++|++|++++|.+ ..+. .+. ..|+.|+|++|.+. ..+|..+. .+++|++|+|++|.+++
T Consensus 38 ~~~~~~~L~~l~l~~n~l-~~p~-----~~~--~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 109 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE-ADLG-----QFT--DIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTG 109 (312)
T ss_dssp EEEEEEECTTHHHHCCTT-CCCH-----HHH--HHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBS
T ss_pred EEccCCCceeEeeccccc-ccHH-----HHH--HHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccc
Confidence 355556677777777776 3222 111 12666777777763 33444443 56677777777777766
Q ss_pred cCCCCC--CCCCCCcEEEccCCcccccCCchhhcc-----cCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcC
Q 003156 118 PLPADI--GFCPHLTTLDLSNNLFTGQLPVSLRLL-----NSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLT 188 (843)
Q Consensus 118 ~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~ 188 (843)
..|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++.+..|..|+++++|++|+|++|++.
T Consensus 110 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 186 (312)
T 1wwl_A 110 TAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPEL 186 (312)
T ss_dssp CCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTC
T ss_pred hhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcC
Confidence 666654 6667777777777776655 5555555 45555555555555444444555555555555555443
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.1e-28 Score=274.93 Aligned_cols=235 Identities=22% Similarity=0.239 Sum_probs=160.3
Q ss_pred CCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEec
Q 003156 128 HLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLR 207 (843)
Q Consensus 128 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 207 (843)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |+.+++|++|+|++|.|++.. ..++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 44444444444444333444444444444444444443333 455555555555555555321 12455555555
Q ss_pred CCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCc
Q 003156 208 GNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNH 287 (843)
Q Consensus 208 ~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 287 (843)
+|.+++..+ ..+++|+.|+|++|.+++..|..++.+++|++|+|++|.
T Consensus 108 ~N~l~~~~~--------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (487)
T 3oja_A 108 NNNISRVSC--------------------------------SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (487)
T ss_dssp SSCCCCEEE--------------------------------CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSC
T ss_pred CCcCCCCCc--------------------------------cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCC
Confidence 555542111 013567777777777777777777788888888888888
Q ss_pred ccCCCCCCcc-ccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCc
Q 003156 288 LRSRIPPELG-YFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPK 366 (843)
Q Consensus 288 l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 366 (843)
+++..|..+. .+++|+.|+|++|.|++.. .+..+++|+.|+|++|.|++. |..|..+++|+.|+|++|.|++ +|.
T Consensus 156 l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~ 231 (487)
T 3oja_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEK 231 (487)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECT
T ss_pred CCCcChHHHhhhCCcccEEecCCCcccccc--ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cch
Confidence 8877776665 6788888888888888652 344588999999999999964 4458899999999999999994 788
Q ss_pred cccCCCCCCEEEccCCccc-ccCCcchhcccccceEeecc
Q 003156 367 SISNLNKLKILKLEFNELS-GEIPQELGKLASLLAVNVSY 405 (843)
Q Consensus 367 ~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~ls~ 405 (843)
.+..+++|+.|+|++|.++ +.+|..+..++.|+.++++.
T Consensus 232 ~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (487)
T ss_dssp TCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccc
Confidence 8999999999999999998 77888888888888888863
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.5e-26 Score=262.17 Aligned_cols=237 Identities=24% Similarity=0.204 Sum_probs=124.2
Q ss_pred CccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEE
Q 003156 78 LKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFIS 157 (843)
Q Consensus 78 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 157 (843)
.++|++|+|++|.+.+..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|+.|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3466666777666666666666677777777777777665444 6666777777777776664321 25566666
Q ss_pred eecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceec
Q 003156 158 VSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGS 237 (843)
Q Consensus 158 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~ 237 (843)
+++|.+++..+. .+++|++|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+..
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---------------- 166 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA---------------- 166 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG----------------
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh----------------
Confidence 666665544332 2345666666666666555555555555555555555555433332221
Q ss_pred CCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCC
Q 003156 238 IPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIP 317 (843)
Q Consensus 238 ~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 317 (843)
.+++|+.|+|++|.+++..+ +..+++|++|+|++|.|++..| .+..+++|+.|+|++|.|++ +|
T Consensus 167 ------------~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp 230 (487)
T 3oja_A 167 ------------SSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IE 230 (487)
T ss_dssp ------------GTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-EC
T ss_pred ------------hCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cc
Confidence 13445555555555543311 1234445555555554443222 24444444444444444442 34
Q ss_pred ccccccCCCcEEEcCCCCCC-CCchhhhcccCCCcEEecc
Q 003156 318 QEVCESRSLGILQLDGNSLT-GPIPQVIRNCTSLYLLSLS 356 (843)
Q Consensus 318 ~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls 356 (843)
..+..+++|+.|++++|.+. +.+|..+..++.|+.|+++
T Consensus 231 ~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 44444455555555555544 3344444444455444443
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1e-24 Score=227.66 Aligned_cols=206 Identities=24% Similarity=0.212 Sum_probs=186.1
Q ss_pred CccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCC
Q 003156 3 NMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLR 82 (843)
Q Consensus 3 ~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~ 82 (843)
+.+.+++++++++ .+|..+ .++|++|+|++|+|..+++..|.++++|++|+|++|.++..+ +..|..+++|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~----~~~~~~l~~L~ 88 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNI---PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP----AGIFKELKNLE 88 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC----TTTTSSCTTCC
T ss_pred CCCEEEccCCCCC-ccCCCC---CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC----hhhhcCCCCCC
Confidence 5789999999999 788754 368999999999999999989999999999999999998544 34577899999
Q ss_pred EEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCc
Q 003156 83 TLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNT 162 (843)
Q Consensus 83 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 162 (843)
+|+|++|++....+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|+
T Consensus 89 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp EEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCc
Confidence 99999999998778889999999999999999998888889999999999999999998888889999999999999999
Q ss_pred ccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCC
Q 003156 163 LTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIP 216 (843)
Q Consensus 163 l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 216 (843)
+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++....+
T Consensus 169 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 169 LKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 998878889999999999999999998777789999999999999999976543
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=2.1e-28 Score=286.69 Aligned_cols=395 Identities=15% Similarity=0.140 Sum_probs=251.6
Q ss_pred CCCccEEecCCCcCcccC---C-----------hhhhhcCCCCcEEEccCcccccccccccc-CCCCCCEEECCCC-CCc
Q 003156 1 MMNMKFLDLSNNLLSGPV---P-----------YQLFENCASLRYLSLAGNILQGPIGKIFN-YCSSLNTLNLSNN-HFS 64 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~---~-----------~~~f~~l~~L~~L~L~~n~i~~~~~~~f~-~l~~L~~L~Ls~N-~i~ 64 (843)
+++|+.|+|++|.....+ | ..++..+++|++|+|++|.+.......+. .+++|++|+|++| .++
T Consensus 65 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~ 144 (594)
T 2p1m_B 65 FPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFS 144 (594)
T ss_dssp CTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEE
T ss_pred CCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCC
Confidence 367888999887532121 1 23456788999999999888765544453 6889999999888 444
Q ss_pred cccCCCcCccccCCccCCEEecCCccCcccCchhhh----cCCCCCEEEcCCCc--cccc-CCCCCCCCCCCcEEEccCC
Q 003156 65 GDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVA----ALHYLKELLLQGNQ--FSGP-LPADIGFCPHLTTLDLSNN 137 (843)
Q Consensus 65 ~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~n~--l~~~-~~~~~~~l~~L~~L~L~~N 137 (843)
... ....+..+++|++|+|++|.+++..+..+. .+++|++|+|++|. ++.. ++..+..+++|++|+|++|
T Consensus 145 ~~~---l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 145 TDG---LAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp HHH---HHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred HHH---HHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 210 111233678899999999987755544443 56689999998886 2211 1112234688999999988
Q ss_pred -cccccCCchhhcccCCcEEEeecC-------cccccCCCCccCCCCccEE-EcccCCcCCCCCCCCCCCCCCcEEEecC
Q 003156 138 -LFTGQLPVSLRLLNSMIFISVSNN-------TLTGDIPHWIGNISTLEFL-DFSNNHLTGSLPSSLFNCKKLSVIRLRG 208 (843)
Q Consensus 138 -~l~~~~~~~~~~l~~L~~L~L~~N-------~l~~~~p~~~~~l~~L~~L-~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 208 (843)
.+.+ ++..+..+++|+.|++..+ .+.+ ++..+.++++|+.| .+.+.... .++..+..+++|+.|+|++
T Consensus 222 ~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~~~L~~L~L~~ 298 (594)
T 2p1m_B 222 VPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-YLPAVYSVCSRLTTLNLSY 298 (594)
T ss_dssp SCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-GGGGGHHHHTTCCEEECTT
T ss_pred CcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccchh-hHHHHHHhhCCCCEEEccC
Confidence 4443 6677788888999885544 3332 33356777788877 34333322 3444444677888888888
Q ss_pred CcCCCCCCchhh-c-cCcceeeccCCcceec-CCCCCCCCCcccccCccCEEeC---------CCCccceeCCcccc-CC
Q 003156 209 NSLNGNIPEGLF-D-LGLEEIDLSENGFMGS-IPPGSSSSSSSTLFQTLRILDL---------SSNNLVGDIPAEMG-LF 275 (843)
Q Consensus 209 N~l~~~~p~~~~-~-~~L~~L~l~~n~l~~~-~p~~~~~~~~~~~l~~L~~L~L---------~~n~l~~~~p~~~~-~l 275 (843)
|.+++.....+. . .+|+.|++++| +... ++. ....+++|++|++ +.+.+++.....+. .+
T Consensus 299 ~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~------l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~ 371 (594)
T 2p1m_B 299 ATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEV------LASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGC 371 (594)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHH------HHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHH------HHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhc
Confidence 876532222211 2 26778888776 3211 100 0123567888877 33455433322332 36
Q ss_pred CCCcEEEcCCCcccCCCCCCcc-ccccceEEEcc--C----Cccccc-----CCccccccCCCcEEEcCCCCCCCCchhh
Q 003156 276 ANLRYLNLSSNHLRSRIPPELG-YFHSLIHLDLR--N----NALYGS-----IPQEVCESRSLGILQLDGNSLTGPIPQV 343 (843)
Q Consensus 276 ~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~----n~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 343 (843)
++|++|.++.|.+++.....+. .+++|+.|+++ + |.+++. ++..+..+++|+.|+|++ .+++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 7888888888877654433443 46788888888 4 555521 112255678888888877 666666666
Q ss_pred hcc-cCCCcEEecccccccccCCccc-cCCCCCCEEEccCCcccccCCc-chhcccccceEeeccccce
Q 003156 344 IRN-CTSLYLLSLSHNHLSGSIPKSI-SNLNKLKILKLEFNELSGEIPQ-ELGKLASLLAVNVSYNRLI 409 (843)
Q Consensus 344 ~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~l~ls~N~l~ 409 (843)
+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|++++|+++
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 665 7888888888888876555555 5678888888888888655443 3445788888888888774
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=5.6e-25 Score=230.67 Aligned_cols=211 Identities=21% Similarity=0.173 Sum_probs=162.4
Q ss_pred CCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCcc
Q 003156 175 STLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTL 254 (843)
Q Consensus 175 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L 254 (843)
++|++|+|++|.+++..+..|.++++|++|++++|.+++..+..+ ..+++|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----------------------------~~l~~L 78 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY-----------------------------QSLSHL 78 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTT-----------------------------TTCTTC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHc-----------------------------cCCcCC
Confidence 356667777776665555566666777777777666653222111 225677
Q ss_pred CEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCccccc-CCccccccCCCcEEEcCC
Q 003156 255 RILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGS-IPQEVCESRSLGILQLDG 333 (843)
Q Consensus 255 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~Ls~ 333 (843)
++|+|++|.+++..+..|..+++|++|++++|.+.+..+..+..+++|++|++++|++++. +|..+..+++|+.|++++
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~ 158 (276)
T 2z62_A 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158 (276)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCS
T ss_pred CEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCC
Confidence 7777777777777777788888888888888888877777788888888889988888863 588889999999999999
Q ss_pred CCCCCCchhhhcccCCCc----EEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccce
Q 003156 334 NSLTGPIPQVIRNCTSLY----LLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLI 409 (843)
Q Consensus 334 N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 409 (843)
|++++..+..|..+++|+ .|++++|++++..+..+ ...+|+.|+|++|++++..+..+..+++|+.|++++|+++
T Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp SCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred CCCCcCCHHHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 999987778888888777 89999999986555544 4558999999999999777777889999999999999998
Q ss_pred ecCCCC
Q 003156 410 GRLPVG 415 (843)
Q Consensus 410 ~~~p~~ 415 (843)
+..|..
T Consensus 238 c~c~~l 243 (276)
T 2z62_A 238 CSCPRI 243 (276)
T ss_dssp CCTTTT
T ss_pred ccCCch
Confidence 877743
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.7e-25 Score=233.84 Aligned_cols=221 Identities=19% Similarity=0.178 Sum_probs=173.0
Q ss_pred ccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCE
Q 003156 4 MKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRT 83 (843)
Q Consensus 4 l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~ 83 (843)
+..+++.++.+.+.+. +..+++|++|++++|.+..+.. +..+++|++|+|++|.+++.. .+..+++|++
T Consensus 21 l~~l~l~~~~~~~~~~---~~~l~~L~~L~l~~~~i~~~~~--l~~l~~L~~L~l~~n~l~~~~------~l~~l~~L~~ 89 (272)
T 3rfs_A 21 TIKANLKKKSVTDAVT---QNELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLHDIS------ALKELTNLTY 89 (272)
T ss_dssp HHHHHHTCSCTTSEEC---HHHHTTCCEEECTTSCCCCCTT--GGGCTTCCEEECTTSCCCCCG------GGTTCTTCCE
T ss_pred HHHHHhcCcccccccc---cccccceeeeeeCCCCcccccc--cccCCCCcEEECCCCCCCCch------hhcCCCCCCE
Confidence 3455677777763333 4567888888888888886654 778888888888888887532 4677888888
Q ss_pred EecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcc
Q 003156 84 LDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTL 163 (843)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 163 (843)
|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|+.|++++|++
T Consensus 90 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 169 (272)
T 3rfs_A 90 LILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCc
Confidence 88888888877777788888888888888888877777788888888888888888877777788888888888888888
Q ss_pred cccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCC
Q 003156 164 TGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPG 241 (843)
Q Consensus 164 ~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~ 241 (843)
++..+..|+.+++|++|+|++|++++..+..+..+++|+.|++++|++.+..| +++.++++.|.+.|.+|..
T Consensus 170 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~------~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 170 QSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT------TTHHHHHHHHHTGGGBBCT
T ss_pred CccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc------HHHHHHHHHHhCCCcccCc
Confidence 87777778888888888888888887777778888888888888888875444 3555566666666655544
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=5e-25 Score=231.03 Aligned_cols=223 Identities=22% Similarity=0.164 Sum_probs=170.1
Q ss_pred EEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEe
Q 003156 6 FLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLD 85 (843)
Q Consensus 6 ~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~ 85 (843)
.++.++.+++ .+|... .++|++|+|++|+|.+++...|.++++|++|+|++|++++.+. ..|..+++|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l---~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~ 82 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNL---PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED----GAYQSLSHLSTLI 82 (276)
T ss_dssp EEECTTSCCS-SCCSSS---CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECT----TTTTTCTTCCEEE
T ss_pred eEEecCCCcc-ccCCCC---CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCH----HHccCCcCCCEEE
Confidence 5677777777 777653 2568888888888888887778888888888888888875433 3567788888888
Q ss_pred cCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCccccc-CCchhhcccCCcEEEeecCccc
Q 003156 86 LSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQ-LPVSLRLLNSMIFISVSNNTLT 164 (843)
Q Consensus 86 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~ 164 (843)
|++|.+++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+++. .|..|..+++|++|+|++|+++
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 83 LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 888888877777888888888888888888877666788888888888888888764 4788888888888888888888
Q ss_pred ccCCCCccCCCCcc----EEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcceec
Q 003156 165 GDIPHWIGNISTLE----FLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFMGS 237 (843)
Q Consensus 165 ~~~p~~~~~l~~L~----~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~ 237 (843)
+..+..|..+.+|+ +|++++|.+++..+..+. ..+|+.|++++|.+++..+..+... +|+.|++++|.+.+.
T Consensus 163 ~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp EECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred cCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 77677777776666 788888888855444444 4478888888888874444334433 688888888888754
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.5e-24 Score=228.41 Aligned_cols=202 Identities=24% Similarity=0.200 Sum_probs=179.9
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
+++++.+++++|+++ .+|..++ ++++.|+|++|.|..+.+..|.++++|++|+|++|.|++.+. ...+++
T Consensus 9 l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~------~~~l~~ 78 (290)
T 1p9a_G 9 VASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV------DGTLPV 78 (290)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC------CSCCTT
T ss_pred cCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC------CCCCCc
Confidence 468899999999999 8887653 689999999999999988899999999999999999987543 257899
Q ss_pred CCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeec
Q 003156 81 LRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSN 160 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 160 (843)
|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 999999999998 6778889999999999999999988888899999999999999999988888899999999999999
Q ss_pred CcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCC
Q 003156 161 NTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGN 214 (843)
Q Consensus 161 N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (843)
|+++...+..|..+++|++|+|++|+++ .+|..+..+.+|+.|+|++|++...
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 9999777777889999999999999999 6788888888999999999998753
No 328
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=9.2e-26 Score=257.61 Aligned_cols=186 Identities=16% Similarity=0.168 Sum_probs=147.4
Q ss_pred cCeeccccceEEEEEEECCCCeEEEEEEeecCCccc-------ChHHHHHHHHHHHhccCCCccceeeEEEcCCeeEEEE
Q 003156 559 AAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQ-------YPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 559 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~ 631 (843)
.+.||+|+||.||+|.+ .++.+|+|+........ ..+.+.+|++++++++||||+++..++...+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 45799999999999965 57889999875432211 1245789999999999999997777777778889999
Q ss_pred EeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcccccc
Q 003156 632 DYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTR 711 (843)
Q Consensus 632 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 711 (843)
||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999975 358999999999999998 9999999999999999 999999999998765
Q ss_pred cccce-----eccccccccccCCcccccCc-CCCCCchhHHHHHHHHHHHHhCCCCCc
Q 003156 712 LDKHV-----MSNRFQSALGYVAPELTCQS-LRVNEKCDIYGFGVLILELVTGRRPVE 763 (843)
Q Consensus 712 ~~~~~-----~~~~~~g~~~y~aPE~~~~~-~~~~~~~Dv~S~Gvil~elltg~~p~~ 763 (843)
..... ......||+.|||||++... ..|+..+|+||..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 33221 12456799999999988331 346788899999999999888887773
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1e-23 Score=220.14 Aligned_cols=160 Identities=26% Similarity=0.214 Sum_probs=91.0
Q ss_pred CccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEc
Q 003156 252 QTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQL 331 (843)
Q Consensus 252 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 331 (843)
++|++|+|++|.++...+..|..+++|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 34444444444444333333444555555555555555544445555555555555555555554555556666666666
Q ss_pred CCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceec
Q 003156 332 DGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 332 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 411 (843)
++|.+++..+..|..+++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|+.|++++|++.+.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 66666655445566666666666666666655455566666666666666666655555566666666666666665543
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.1e-24 Score=224.24 Aligned_cols=206 Identities=19% Similarity=0.173 Sum_probs=186.6
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
+++|+.|++++|.++ .++. +..+++|++|+|++|.+.+++ .+..+++|++|+|++|.+++.++ ..|..+++
T Consensus 40 l~~L~~L~l~~~~i~-~~~~--l~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~ 110 (272)
T 3rfs_A 40 LNSIDQIIANNSDIK-SVQG--IQYLPNVRYLALGGNKLHDIS--ALKELTNLTYLILTGNQLQSLPN----GVFDKLTN 110 (272)
T ss_dssp HTTCCEEECTTSCCC-CCTT--GGGCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECTTSCCCCCCT----TTTTTCTT
T ss_pred ccceeeeeeCCCCcc-cccc--cccCCCCcEEECCCCCCCCch--hhcCCCCCCEEECCCCccCccCh----hHhcCCcC
Confidence 467999999999998 6663 788999999999999999864 68999999999999999986543 35788999
Q ss_pred CCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeec
Q 003156 81 LRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSN 160 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 160 (843)
|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 111 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (272)
T 3rfs_A 111 LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQ 190 (272)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCC
Confidence 99999999999988888899999999999999999988888889999999999999999988888899999999999999
Q ss_pred CcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc
Q 003156 161 NTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL 222 (843)
Q Consensus 161 N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 222 (843)
|++++..+..|..+++|++|+|++|.+.+ .+++|+.|+++.|.++|.+|..+...
T Consensus 191 N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 191 NQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCccccc
Confidence 99998888889999999999999999874 36689999999999999999887754
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=8.6e-24 Score=222.56 Aligned_cols=204 Identities=25% Similarity=0.237 Sum_probs=147.1
Q ss_pred ccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccc
Q 003156 171 IGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTL 250 (843)
Q Consensus 171 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~ 250 (843)
++++++++++++++|.++ .+|..+. ++++.|+|++|.+++..+..+ ..
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~-----------------------------~~ 53 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATL-----------------------------MP 53 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGG-----------------------------TT
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHh-----------------------------hc
Confidence 456677777777777777 4455443 567777777777663333222 23
Q ss_pred cCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEE
Q 003156 251 FQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQ 330 (843)
Q Consensus 251 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 330 (843)
+++|+.|+|++|.|++..+. +.+++|++|++++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 54 l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 56788888888888754432 67778888888888887 4566777778888888888888866667778888888888
Q ss_pred cCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeecccccee
Q 003156 331 LDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIG 410 (843)
Q Consensus 331 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 410 (843)
|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.++|++|++..
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 8888888776677777888888888888887555556677888888888888887 677777777778888877777654
No 332
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=1.1e-26 Score=271.95 Aligned_cols=399 Identities=15% Similarity=0.107 Sum_probs=282.7
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCc-ccccc-ccccccCCCCCCEEECCCCCCccccCCCcCccccCC
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGN-ILQGP-IGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSL 78 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n-~i~~~-~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l 78 (843)
+++|++|+|++|.+++..+..+...+++|++|+|++| .+... ....+.++++|++|+|++|.+++............+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 4689999999999986656555457999999999999 55542 334456899999999999998753322122233467
Q ss_pred ccCCEEecCCcc--Ccc-cCchhhhcCCCCCEEEcCCC-cccccCCCCCCCCCCCcEEEccCC-------cccccCCchh
Q 003156 79 KRLRTLDLSHNL--FSG-SIPQGVAALHYLKELLLQGN-QFSGPLPADIGFCPHLTTLDLSNN-------LFTGQLPVSL 147 (843)
Q Consensus 79 ~~L~~L~L~~n~--l~~-~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~N-------~l~~~~~~~~ 147 (843)
++|++|++++|. +.. .+...+..+++|++|+|++| .+.+ ++..+..+++|++|+++.+ .+.+ ++..+
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l 261 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVAL 261 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHH
Confidence 899999999997 321 12233456799999999999 4543 6667778999999996554 4443 33477
Q ss_pred hcccCCcEEE-eecCcccccCCCCccCCCCccEEEcccCCcCCCC-CCCCCCCCCCcEEEecCCcCCCCCCchhh-c-cC
Q 003156 148 RLLNSMIFIS-VSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSL-PSSLFNCKKLSVIRLRGNSLNGNIPEGLF-D-LG 223 (843)
Q Consensus 148 ~~l~~L~~L~-L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~-~~ 223 (843)
.++++|+.|+ +.+... ..++..+..+++|++|+|++|.+++.. ...+..+++|+.|++++| +.......+. . .+
T Consensus 262 ~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred hcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 8899999983 443332 345555667899999999999976432 223568899999999998 4422222222 2 36
Q ss_pred cceeeccC---------CcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCcccc-CCCCCcEEEcC--C----Cc
Q 003156 224 LEEIDLSE---------NGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMG-LFANLRYLNLS--S----NH 287 (843)
Q Consensus 224 L~~L~l~~---------n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~--~----N~ 287 (843)
|+.|++++ +.+.+.... .....+++|+.|.++.|.+++.....+. .+++|+.|+++ + |.
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~-----~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~ 414 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLV-----SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDY 414 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHH-----HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCT
T ss_pred CCEEEEecCcccccccCCCCCHHHHH-----HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccc
Confidence 99998844 333211000 0012368899999999999876665554 58999999999 4 55
Q ss_pred ccCCCC-----CCccccccceEEEccCCcccccCCccccc-cCCCcEEEcCCCCCCCCchhhh-cccCCCcEEecccccc
Q 003156 288 LRSRIP-----PELGYFHSLIHLDLRNNALYGSIPQEVCE-SRSLGILQLDGNSLTGPIPQVI-RNCTSLYLLSLSHNHL 360 (843)
Q Consensus 288 l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l 360 (843)
++.... ..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ .++++|+.|+|++|.+
T Consensus 415 l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 415 LTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp TTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred ccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 653221 1256778999999987 777665566665 8999999999999987666665 7799999999999999
Q ss_pred cccCCc-cccCCCCCCEEEccCCcccccCCcch-hcccccceEeeccccce
Q 003156 361 SGSIPK-SISNLNKLKILKLEFNELSGEIPQEL-GKLASLLAVNVSYNRLI 409 (843)
Q Consensus 361 ~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~l~ls~N~l~ 409 (843)
++..+. .+..+++|++|+|++|+++......+ ..++.|+...+..+.-.
T Consensus 494 ~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 494 GDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp CHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred cHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 755444 44568999999999999965444445 55677776666655433
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.2e-25 Score=243.34 Aligned_cols=262 Identities=21% Similarity=0.205 Sum_probs=150.7
Q ss_pred EecCCccCcccCchhhhcCCCCCEEEcCCCcccccCC----CCCCCCC-CCcEEEccCCcccccCCchhhcc-----cCC
Q 003156 84 LDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLP----ADIGFCP-HLTTLDLSNNLFTGQLPVSLRLL-----NSM 153 (843)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L 153 (843)
++|++|.+++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5666677766666655555567777777777765544 4555666 67777777777766555555554 556
Q ss_pred cEEEeecCcccccCCCCcc----CC-CCccEEEcccCCcCCCCCCCCC----C-CCCCcEEEecCCcCCCCCCchhhccC
Q 003156 154 IFISVSNNTLTGDIPHWIG----NI-STLEFLDFSNNHLTGSLPSSLF----N-CKKLSVIRLRGNSLNGNIPEGLFDLG 223 (843)
Q Consensus 154 ~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~i~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~p~~~~~~~ 223 (843)
++|+|++|++++..+..++ .+ ++|++|+|++|++++..+..+. . .++|++|+|++|.++...+..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l---- 158 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL---- 158 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH----
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH----
Confidence 6666666655544333222 22 4555555555555543332221 1 2345555555554442221111
Q ss_pred cceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCC-CCcEEEcCCCcccCCCCCCcc----c
Q 003156 224 LEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFA-NLRYLNLSSNHLRSRIPPELG----Y 298 (843)
Q Consensus 224 L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~----~ 298 (843)
+..+..++ +|++|+|++|.|++..+..+. .
T Consensus 159 ---------------------------------------------~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 193 (362)
T 3goz_A 159 ---------------------------------------------IQILAAIPANVNSLNLRGNNLASKNCAELAKFLAS 193 (362)
T ss_dssp ---------------------------------------------HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHT
T ss_pred ---------------------------------------------HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHh
Confidence 11122222 455555555554443332222 2
Q ss_pred c-ccceEEEccCCccccc----CCccccc-cCCCcEEEcCCCCCCCCchh----hhcccCCCcEEeccccccccc-----
Q 003156 299 F-HSLIHLDLRNNALYGS----IPQEVCE-SRSLGILQLDGNSLTGPIPQ----VIRNCTSLYLLSLSHNHLSGS----- 363 (843)
Q Consensus 299 l-~~L~~L~L~~n~l~~~----~~~~~~~-l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~----- 363 (843)
+ .+|++|+|++|.|++. ++..+.. .++|+.|+|++|.+++..+. .+..+++|+.|+|++|.+.+.
T Consensus 194 ~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~ 273 (362)
T 3goz_A 194 IPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQC 273 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHH
T ss_pred CCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHH
Confidence 2 3566666666666532 3444544 35888888888888876553 346678899999999985432
Q ss_pred --CCccccCCCCCCEEEccCCcccccCCcchhc
Q 003156 364 --IPKSISNLNKLKILKLEFNELSGEIPQELGK 394 (843)
Q Consensus 364 --~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 394 (843)
++..+..+++|+.|||++|++.+..+..+.+
T Consensus 274 ~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~~ 306 (362)
T 3goz_A 274 KALGAAFPNIQKIILVDKNGKEIHPSHSIPISN 306 (362)
T ss_dssp HHHHTTSTTCCEEEEECTTSCBCCGGGCHHHHH
T ss_pred HHHHHHhccCCceEEEecCCCcCCCcchHHHHH
Confidence 3446778888999999999988776665543
No 334
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.8e-25 Score=246.54 Aligned_cols=290 Identities=21% Similarity=0.226 Sum_probs=184.7
Q ss_pred cCCEEecCCccCcccCchhhhcCCCCCEEEcCCCccccc----CCCCCCCCCCCcEEEccCCccc---ccCCchhhcccC
Q 003156 80 RLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGP----LPADIGFCPHLTTLDLSNNLFT---GQLPVSLRLLNS 152 (843)
Q Consensus 80 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~---~~~~~~~~~l~~ 152 (843)
.|+...++...+. .++..+..+++|++|+|++|.++.. ++..+..+++|++|+|++|.+. +..|..+..+
T Consensus 10 ~L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l-- 86 (386)
T 2ca6_A 10 SLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLL-- 86 (386)
T ss_dssp CCEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHH--
T ss_pred ccccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHH--
Confidence 3444445555554 5667778888888888888888754 3344677888888888886443 3334433211
Q ss_pred CcEEEeecCcccccCCCCccCCCCccEEEcccCCcCC----CCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceee
Q 003156 153 MIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTG----SLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEID 228 (843)
Q Consensus 153 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~ 228 (843)
...|..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+... +..
T Consensus 87 ---------------~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~~-- 148 (386)
T 2ca6_A 87 ---------------LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA-LQE-- 148 (386)
T ss_dssp ---------------HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH-HHH--
T ss_pred ---------------HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH-HHH--
Confidence 1234566777777777777765 355566777778888888777753333222211 000
Q ss_pred ccCCcceecCCCCCCCCCcccccCccCEEeCCCCccc-eeCC---ccccCCCCCcEEEcCCCcccC-----CCCCCcccc
Q 003156 229 LSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLV-GDIP---AEMGLFANLRYLNLSSNHLRS-----RIPPELGYF 299 (843)
Q Consensus 229 l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l 299 (843)
+..|.+.+. .++|++|+|++|+++ +.++ ..+..+++|++|++++|.|+. ..+..+..+
T Consensus 149 l~~~~~~~~-------------~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 149 LAVNKKAKN-------------APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHHHHHT-------------CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred Hhhhhhccc-------------CCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 011111110 157888888888876 2333 356677788888888888762 234467777
Q ss_pred ccceEEEccCCccc----ccCCccccccCCCcEEEcCCCCCCCC----chhhhc--ccCCCcEEecccccccc----cCC
Q 003156 300 HSLIHLDLRNNALY----GSIPQEVCESRSLGILQLDGNSLTGP----IPQVIR--NCTSLYLLSLSHNHLSG----SIP 365 (843)
Q Consensus 300 ~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p 365 (843)
++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ++..+. .+++|+.|+|++|.+++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 78888888888885 56677777888888888888888765 455553 37888888888888876 367
Q ss_pred ccc-cCCCCCCEEEccCCcccccCC--cchh-cccccceEee
Q 003156 366 KSI-SNLNKLKILKLEFNELSGEIP--QELG-KLASLLAVNV 403 (843)
Q Consensus 366 ~~~-~~l~~L~~L~L~~N~l~~~~p--~~~~-~l~~L~~l~l 403 (843)
..+ .++++|++|+|++|++++..+ ..+. .++.++.+++
T Consensus 296 ~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l 337 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGEL 337 (386)
T ss_dssp HHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHHHHHTCCEE
T ss_pred HHHHhcCCCceEEEccCCcCCcchhHHHHHHHHhhhcCcchh
Confidence 666 567888888888888876653 2222 3444444444
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.5e-23 Score=212.96 Aligned_cols=208 Identities=14% Similarity=0.137 Sum_probs=170.0
Q ss_pred CCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCC-CccccCCCcCccccCCccCCEEecCC-
Q 003156 11 NNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNH-FSGDLDFASGYGIWSLKRLRTLDLSH- 88 (843)
Q Consensus 11 ~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~-i~~~~~~~~~~~~~~l~~L~~L~L~~- 88 (843)
.++++ .+|. + .++|++|+|++|+|+++++..|.++++|++|+|++|+ ++..++ ..|..+++|++|++++
T Consensus 20 c~~l~-~ip~--~--~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~----~~f~~l~~L~~L~l~~~ 90 (239)
T 2xwt_C 20 CKDIQ-RIPS--L--PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLES----HSFYNLSKVTHIEIRNT 90 (239)
T ss_dssp ECSCS-SCCC--C--CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECT----TTEESCTTCCEEEEEEE
T ss_pred ccCcc-ccCC--C--CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCH----hHcCCCcCCcEEECCCC
Confidence 34476 7886 3 3589999999999999988889999999999999997 775443 3578889999999998
Q ss_pred ccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCc---EEEccCC-cccccCCchhhcccCCc-EEEeecCcc
Q 003156 89 NLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLT---TLDLSNN-LFTGQLPVSLRLLNSMI-FISVSNNTL 163 (843)
Q Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l 163 (843)
|+++...+..|.++++|++|+|++|++++ +|. |..+++|+ +|++++| .++...+..|..+++|+ .|++++|++
T Consensus 91 n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 91 RNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp TTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 89987777888999999999999999985 555 88888888 9999999 89888888899999999 999999999
Q ss_pred cccCCCCccCCCCccEEEcccCC-cCCCCCCCCCCC-CCCcEEEecCCcCCCCCCchhhccCcceeeccCC
Q 003156 164 TGDIPHWIGNISTLEFLDFSNNH-LTGSLPSSLFNC-KKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSEN 232 (843)
Q Consensus 164 ~~~~p~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n 232 (843)
+...+..|.. ++|++|+|++|+ ++...+..|..+ ++|+.|++++|.++ .+|.. .-.+|+.|+++++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~-~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK-GLEHLKELIARNT 236 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT-TCTTCSEEECTTC
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh-HhccCceeeccCc
Confidence 8544555555 889999999995 887777788888 99999999999998 45554 2236888888765
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=7.2e-25 Score=239.25 Aligned_cols=256 Identities=19% Similarity=0.203 Sum_probs=163.9
Q ss_pred EccCCcccccCCchhhcccCCcEEEeecCcccccCC----CCccCCC-CccEEEcccCCcCCCCCCCCCCC-----CCCc
Q 003156 133 DLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIP----HWIGNIS-TLEFLDFSNNHLTGSLPSSLFNC-----KKLS 202 (843)
Q Consensus 133 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l-----~~L~ 202 (843)
+++.|.+++.+|..+...++|++|+|++|++++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 444444444444444433344444444444443333 3444444 55555555555554444444443 5666
Q ss_pred EEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCccccc-CccCEEeCCCCccceeCCcccc----C-CC
Q 003156 203 VIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLF-QTLRILDLSSNNLVGDIPAEMG----L-FA 276 (843)
Q Consensus 203 ~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l-~~L~~L~L~~n~l~~~~p~~~~----~-l~ 276 (843)
+|+|++|.+++..+..+... ...+ ++|++|+|++|++++..+..+. . .+
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~-------------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 138 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKT-------------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPA 138 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHH-------------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCT
T ss_pred EEECcCCcCChHHHHHHHHH-------------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCC
Confidence 66666666654443333221 0012 4677777777777655444433 2 25
Q ss_pred CCcEEEcCCCcccCCCCCC----ccccc-cceEEEccCCcccccCCccccc----c-CCCcEEEcCCCCCCCC----chh
Q 003156 277 NLRYLNLSSNHLRSRIPPE----LGYFH-SLIHLDLRNNALYGSIPQEVCE----S-RSLGILQLDGNSLTGP----IPQ 342 (843)
Q Consensus 277 ~L~~L~L~~N~l~~~~~~~----~~~l~-~L~~L~L~~n~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~----~p~ 342 (843)
+|++|+|++|.+++..+.. +..++ +|++|+|++|++++..+..+.. + ++|+.|+|++|.|++. ++.
T Consensus 139 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 139 SITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 7888888888887543322 34444 9999999999999776655554 4 6999999999999863 556
Q ss_pred hhcc-cCCCcEEecccccccccCC----ccccCCCCCCEEEccCCcccccC-------CcchhcccccceEeecccccee
Q 003156 343 VIRN-CTSLYLLSLSHNHLSGSIP----KSISNLNKLKILKLEFNELSGEI-------PQELGKLASLLAVNVSYNRLIG 410 (843)
Q Consensus 343 ~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~-------p~~~~~l~~L~~l~ls~N~l~~ 410 (843)
.+.. .++|+.|+|++|++++..+ ..+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|++..
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 6666 4599999999999986544 44578899999999999965433 3456788899999999999876
Q ss_pred cCC
Q 003156 411 RLP 413 (843)
Q Consensus 411 ~~p 413 (843)
..|
T Consensus 299 ~~~ 301 (362)
T 3goz_A 299 SHS 301 (362)
T ss_dssp GGC
T ss_pred cch
Confidence 643
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=7.3e-23 Score=217.72 Aligned_cols=191 Identities=23% Similarity=0.303 Sum_probs=90.3
Q ss_pred cCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCC
Q 003156 25 NCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHY 104 (843)
Q Consensus 25 ~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 104 (843)
.+++|++|++++|.+..++ .+..+++|++|+|++|.+++.+. +..+++|++|+|++|++++ ++ .+..+++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~------~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~ 108 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP------LKNLTKITELELSGNPLKN-VS-AIAGLQS 108 (308)
T ss_dssp HHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG------GTTCCSCCEEECCSCCCSC-CG-GGTTCTT
T ss_pred HcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh------HccCCCCCEEEccCCcCCC-ch-hhcCCCC
Confidence 3445555555555554443 24445555555555555443211 3444555555555555542 21 3455555
Q ss_pred CCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEccc
Q 003156 105 LKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSN 184 (843)
Q Consensus 105 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 184 (843)
|++|+|++|++++. +. +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|+|++
T Consensus 109 L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~ 182 (308)
T 1h6u_A 109 IKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADD 182 (308)
T ss_dssp CCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCC
Confidence 55555555555432 21 4455555555555555543322 4455555555555555543222 45555555555555
Q ss_pred CCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcce
Q 003156 185 NHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFM 235 (843)
Q Consensus 185 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~ 235 (843)
|++++..+ +..+++|+.|++++|.+++.. . +..+ +|+.|++++|.+.
T Consensus 183 n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~-~-l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 183 NKISDISP--LASLPNLIEVHLKNNQISDVS-P-LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp SCCCCCGG--GGGCTTCCEEECTTSCCCBCG-G-GTTCTTCCEEEEEEEEEE
T ss_pred CccCcChh--hcCCCCCCEEEccCCccCccc-c-ccCCCCCCEEEccCCeee
Confidence 55543221 445555555555555554322 1 2222 4555555555554
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=5.6e-25 Score=242.60 Aligned_cols=243 Identities=22% Similarity=0.296 Sum_probs=182.6
Q ss_pred cCCchhhcccCCcEEEeecCccccc----CCCCccCCCCccEEEcccCCc---CCCCCCCC-------CCCCCCcEEEec
Q 003156 142 QLPVSLRLLNSMIFISVSNNTLTGD----IPHWIGNISTLEFLDFSNNHL---TGSLPSSL-------FNCKKLSVIRLR 207 (843)
Q Consensus 142 ~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~i---~~~~~~~~-------~~l~~L~~L~L~ 207 (843)
.++..+..+++|+.|+|++|++... ++..|..+++|++|+|++|.+ ++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3445555666666666666666543 233466777788888777533 33444444 678899999999
Q ss_pred CCcCCCC----CCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccC----C----
Q 003156 208 GNSLNGN----IPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGL----F---- 275 (843)
Q Consensus 208 ~N~l~~~----~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~----l---- 275 (843)
+|.++.. +|..+. .+++|++|+|++|.+++..+..+.. +
T Consensus 103 ~n~l~~~~~~~l~~~l~-----------------------------~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~ 153 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLS-----------------------------KHTPLEHLYLHNNGLGPQAGAKIARALQELAVNK 153 (386)
T ss_dssp SCCCCTTTHHHHHHHHH-----------------------------HCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHH-----------------------------hCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhh
Confidence 9988752 232222 3567888888888886544444433 3
Q ss_pred -----CCCcEEEcCCCcccC-CCC---CCccccccceEEEccCCcccc-----cCCccccccCCCcEEEcCCCCCC----
Q 003156 276 -----ANLRYLNLSSNHLRS-RIP---PELGYFHSLIHLDLRNNALYG-----SIPQEVCESRSLGILQLDGNSLT---- 337 (843)
Q Consensus 276 -----~~L~~L~L~~N~l~~-~~~---~~~~~l~~L~~L~L~~n~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~---- 337 (843)
++|++|++++|+++. ..+ ..+..+++|++|+|++|+++. ..+..+..+++|+.|+|++|.++
T Consensus 154 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~ 233 (386)
T 2ca6_A 154 KAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS 233 (386)
T ss_dssp HHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH
T ss_pred hcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHH
Confidence 899999999999973 233 356678899999999999982 34447889999999999999996
Q ss_pred CCchhhhcccCCCcEEeccccccccc----CCcccc--CCCCCCEEEccCCcccc----cCCcch-hcccccceEeeccc
Q 003156 338 GPIPQVIRNCTSLYLLSLSHNHLSGS----IPKSIS--NLNKLKILKLEFNELSG----EIPQEL-GKLASLLAVNVSYN 406 (843)
Q Consensus 338 ~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~l~ls~N 406 (843)
+.+|..+..+++|+.|+|++|+|++. +|..+. .+++|+.|+|++|+|++ .+|..+ .++++|+.|++++|
T Consensus 234 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N 313 (386)
T 2ca6_A 234 SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313 (386)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred HHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCC
Confidence 57888999999999999999999866 567774 49999999999999997 488887 67899999999999
Q ss_pred cceecCC
Q 003156 407 RLIGRLP 413 (843)
Q Consensus 407 ~l~~~~p 413 (843)
++++..|
T Consensus 314 ~l~~~~~ 320 (386)
T 2ca6_A 314 RFSEEDD 320 (386)
T ss_dssp BSCTTSH
T ss_pred cCCcchh
Confidence 9886543
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.3e-23 Score=211.26 Aligned_cols=195 Identities=17% Similarity=0.170 Sum_probs=106.9
Q ss_pred CCCEEECCCCCCccccCCCcCccccCCccCCEEecCCcc-CcccCchhhhcCCCCCEEEcCC-CcccccCCCCCCCCCCC
Q 003156 52 SLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNL-FSGSIPQGVAALHYLKELLLQG-NQFSGPLPADIGFCPHL 129 (843)
Q Consensus 52 ~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L 129 (843)
+|++|+|++|+|++.+. ..|..+++|++|++++|+ ++...+..|.++++|++|+|++ |.+++..+..|.++++|
T Consensus 32 ~l~~L~l~~n~l~~i~~----~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L 107 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPS----HAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLL 107 (239)
T ss_dssp TCCEEEEESCCCSEECT----TTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTC
T ss_pred cccEEEEeCCcceEECH----HHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCC
Confidence 56666666666654332 235556666666666664 5555555566666666666665 66665555555566666
Q ss_pred cEEEccCCcccccCCchhhcccCCc---EEEeecC-cccccCCCCccCCCCcc-EEEcccCCcCCCCCCCCCCCCCCcEE
Q 003156 130 TTLDLSNNLFTGQLPVSLRLLNSMI---FISVSNN-TLTGDIPHWIGNISTLE-FLDFSNNHLTGSLPSSLFNCKKLSVI 204 (843)
Q Consensus 130 ~~L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~i~~~~~~~~~~l~~L~~L 204 (843)
++|++++|.+++ +|. |..+++|+ .|++++| ++++..+..|.++++|+ +|++++|+++...+..|.. ++|+.|
T Consensus 108 ~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L 184 (239)
T 2xwt_C 108 KFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAV 184 (239)
T ss_dssp CEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEE
T ss_pred CEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEE
Confidence 666666666654 333 55555555 6666666 56555555566666666 6666666665332223333 566666
Q ss_pred EecCCc-CCCCCCchhhcc--CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCC
Q 003156 205 RLRGNS-LNGNIPEGLFDL--GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSN 262 (843)
Q Consensus 205 ~L~~N~-l~~~~p~~~~~~--~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n 262 (843)
++++|+ +++..+..+... +|+.|++++|++.+ +|.. .+++|+.|+++++
T Consensus 185 ~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--------~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 185 YLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--------GLEHLKELIARNT 236 (239)
T ss_dssp ECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--------TCTTCSEEECTTC
T ss_pred EcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--------HhccCceeeccCc
Confidence 666663 553333333333 46666666666652 2221 2455666665554
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=3e-22 Score=206.49 Aligned_cols=180 Identities=19% Similarity=0.170 Sum_probs=126.1
Q ss_pred CCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCE
Q 003156 28 SLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKE 107 (843)
Q Consensus 28 ~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 107 (843)
+.++++++++.++.++.... ++|++|+|++|.+++..+ ..|..+++|++|+|++|++++..+..|..+++|++
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~---~~l~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 87 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIP---ADTEKLDLQSTGLATLSD----ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGT 87 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCC---TTCCEEECTTSCCCCCCT----TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCeEEecCCCCccccCCCCC---CCCCEEEccCCCcCccCH----hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCE
Confidence 45566666666666555432 456666666666664322 24556666666666666666666666677777777
Q ss_pred EEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCc
Q 003156 108 LLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHL 187 (843)
Q Consensus 108 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i 187 (843)
|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++
T Consensus 88 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 167 (251)
T 3m19_A 88 LGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167 (251)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcC
Confidence 77777777766666667777777777777777766666677777777777777777766666778888888888888888
Q ss_pred CCCCCCCCCCCCCCcEEEecCCcCCCC
Q 003156 188 TGSLPSSLFNCKKLSVIRLRGNSLNGN 214 (843)
Q Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (843)
++..+..|..+++|+.|+|++|++.+.
T Consensus 168 ~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 168 QSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 877677788888888888888888765
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=4.2e-22 Score=205.37 Aligned_cols=180 Identities=22% Similarity=0.179 Sum_probs=165.7
Q ss_pred CccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCC
Q 003156 3 NMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLR 82 (843)
Q Consensus 3 ~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~ 82 (843)
+.+.+++++++++ .+|.... ++|++|+|++|.|.++.+..|.++++|++|+|++|.|++.+ +..|..+++|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~ 86 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS----AGVFDDLTELG 86 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC----TTTTTTCTTCC
T ss_pred CCeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC----HhHhccCCcCC
Confidence 4688999999999 8997653 68999999999999999999999999999999999998644 34678899999
Q ss_pred EEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCc
Q 003156 83 TLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNT 162 (843)
Q Consensus 83 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 162 (843)
+|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 87 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 99999999998888899999999999999999998888888999999999999999998888899999999999999999
Q ss_pred ccccCCCCccCCCCccEEEcccCCcCCC
Q 003156 163 LTGDIPHWIGNISTLEFLDFSNNHLTGS 190 (843)
Q Consensus 163 l~~~~p~~~~~l~~L~~L~L~~N~i~~~ 190 (843)
+++..+..|..+++|++|+|++|.++..
T Consensus 167 l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 167 LQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9988888999999999999999999853
No 342
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=5.9e-23 Score=218.97 Aligned_cols=153 Identities=24% Similarity=0.298 Sum_probs=102.9
Q ss_pred cCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccC---CC-CCCccccccceEEEccCCcccccCCc----cccc
Q 003156 251 FQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRS---RI-PPELGYFHSLIHLDLRNNALYGSIPQ----EVCE 322 (843)
Q Consensus 251 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~---~~-~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~ 322 (843)
+++|++|+|++|++.+..+..++.+++|++|+|++|++.+ .. +..+..+++|++|+|++|+++ .++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 3456666666666655555666666666666666666543 11 122355667777777777775 2222 2456
Q ss_pred cCCCcEEEcCCCCCCCCchhhhccc---CCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccc
Q 003156 323 SRSLGILQLDGNSLTGPIPQVIRNC---TSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLL 399 (843)
Q Consensus 323 l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 399 (843)
+++|++|+|++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 7788888888888887767766666 58888888888888 6676664 7888888888888853 33 56778888
Q ss_pred eEeeccccce
Q 003156 400 AVNVSYNRLI 409 (843)
Q Consensus 400 ~l~ls~N~l~ 409 (843)
.|++++|+++
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 8888888776
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=4.7e-23 Score=219.73 Aligned_cols=225 Identities=20% Similarity=0.189 Sum_probs=148.6
Q ss_pred CCCcEEEccCcccccccc---ccccCCCCCCEEECCCCCCccccCCCcCccc--cCCccCCEEecCCccCcccCc----h
Q 003156 27 ASLRYLSLAGNILQGPIG---KIFNYCSSLNTLNLSNNHFSGDLDFASGYGI--WSLKRLRTLDLSHNLFSGSIP----Q 97 (843)
Q Consensus 27 ~~L~~L~L~~n~i~~~~~---~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~ 97 (843)
..++.|.+.++.+....- ..+..+++|++|+|++|.+++..+. .+ ..+++|++|+|++|.+.+..+ .
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~----~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~ 139 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPP----LPLEATGLALSSLRLRNVSWATGRSWLAEL 139 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCC----CSSSCCCBCCSSCEEESCCCSSTTSSHHHH
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhh----hhhhccCCCCCEEEeecccccchhhhhHHH
Confidence 346677777766642110 0122345677777777777654332 23 567777777777777775433 3
Q ss_pred hhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccc---cC-CchhhcccCCcEEEeecCcccccCCC----
Q 003156 98 GVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTG---QL-PVSLRLLNSMIFISVSNNTLTGDIPH---- 169 (843)
Q Consensus 98 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~-~~~~~~l~~L~~L~L~~N~l~~~~p~---- 169 (843)
.+..+++|++|+|++|++++..+..|+.+++|++|+|++|++.+ .. +..+..+++|++|+|++|+++. ++.
T Consensus 140 ~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~ 218 (310)
T 4glp_A 140 QQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAA 218 (310)
T ss_dssp HTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHH
T ss_pred HhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHH
Confidence 34467777777777777777777777777777777777777653 11 2234567777777777777752 222
Q ss_pred CccCCCCccEEEcccCCcCCCCCCCCCCC---CCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCC
Q 003156 170 WIGNISTLEFLDFSNNHLTGSLPSSLFNC---KKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSS 246 (843)
Q Consensus 170 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~ 246 (843)
.++++++|++|+|++|++++..|..+..+ ++|++|+|++|.++ .+|..+. .+|+.|++++|++.+. |.
T Consensus 219 l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-~~L~~L~Ls~N~l~~~-~~------ 289 (310)
T 4glp_A 219 LAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-AKLRVLDLSSNRLNRA-PQ------ 289 (310)
T ss_dssp HHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-SCCSCEECCSCCCCSC-CC------
T ss_pred HHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-CCCCEEECCCCcCCCC-ch------
Confidence 24567778888888888776667666665 57888888888877 5666554 4678888888887743 21
Q ss_pred cccccCccCEEeCCCCccce
Q 003156 247 SSTLFQTLRILDLSSNNLVG 266 (843)
Q Consensus 247 ~~~~l~~L~~L~L~~n~l~~ 266 (843)
...+++|+.|+|++|++++
T Consensus 290 -~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 290 -PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp -TTSCCCCSCEECSSTTTSC
T ss_pred -hhhCCCccEEECcCCCCCC
Confidence 1346889999999999874
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=4.4e-22 Score=211.68 Aligned_cols=124 Identities=23% Similarity=0.342 Sum_probs=67.6
Q ss_pred CccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEc
Q 003156 252 QTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQL 331 (843)
Q Consensus 252 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 331 (843)
++|++|+|++|++++. +. +..+++|++|++++|.+++..+ +..+++|++|++++|++++. +. +..+++|+.|++
T Consensus 107 ~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l 180 (308)
T 1h6u_A 107 QSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKA 180 (308)
T ss_dssp TTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEEC
Confidence 3444444444444432 21 4555555555555555554322 55555555666666655532 22 555666666666
Q ss_pred CCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc
Q 003156 332 DGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 332 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
++|.+++..+ +..+++|+.|+|++|++++.. .+..+++|+.|+|++|+++
T Consensus 181 ~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 181 DDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred CCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 6666664332 566666666666666666333 2566666666666666665
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=3.6e-22 Score=216.65 Aligned_cols=200 Identities=14% Similarity=0.082 Sum_probs=132.3
Q ss_pred cEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCE-
Q 003156 5 KFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRT- 83 (843)
Q Consensus 5 ~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~- 83 (843)
++++.++++++ +||..+ .+++++|+|++|+|+.+++++|.++++|++|+|++|++.+.. ...+|.++++|++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i---~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI---EADVFSNLPKLHEI 84 (350)
T ss_dssp TEEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEE---CTTSBCSCTTCCEE
T ss_pred CEEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCcc---ChhHhhcchhhhhh
Confidence 46777888888 788665 357888888888888888888888888888888888875432 2335667777664
Q ss_pred EecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccC-CcccccCCchhhccc-CCcEEEeecC
Q 003156 84 LDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSN-NLFTGQLPVSLRLLN-SMIFISVSNN 161 (843)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N 161 (843)
+.++.|+|....|+.|..+++|++|++++|+++...+..+....++..|++++ |++..+.+..|..+. .++.|+|++|
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred hcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 55566777766677777777777777777777766665666666677777754 456655555565554 4666666666
Q ss_pred cccccCCCCccCCCCccEEEccc-CCcCCCCCCCCCCCCCCcEEEecCCcCC
Q 003156 162 TLTGDIPHWIGNISTLEFLDFSN-NHLTGSLPSSLFNCKKLSVIRLRGNSLN 212 (843)
Q Consensus 162 ~l~~~~p~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (843)
+|+.+.+..| ...+|++|++++ |.++.+.++.|..+++|+.|+|++|+|+
T Consensus 165 ~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 165 GIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp CCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred cccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 6664333333 345566666653 5555443445566666666666666665
No 346
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=9.6e-24 Score=228.17 Aligned_cols=249 Identities=20% Similarity=0.186 Sum_probs=173.1
Q ss_pred CcEEEccCCcccccCCchhhcc--cCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCC-CCCCCCCCCCCcEEE
Q 003156 129 LTTLDLSNNLFTGQLPVSLRLL--NSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGS-LPSSLFNCKKLSVIR 205 (843)
Q Consensus 129 L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~ 205 (843)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 556666666554 3445555 6666777777766655444 44567777777777776643 556666777777777
Q ss_pred ecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCC-cccee-CCccccCCCCCcEEEc
Q 003156 206 LRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSN-NLVGD-IPAEMGLFANLRYLNL 283 (843)
Q Consensus 206 L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L 283 (843)
|++|.+++..+..+. .+++|++|+|++| .+++. ++..+..+++|++|++
T Consensus 125 L~~~~l~~~~~~~l~-----------------------------~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l 175 (336)
T 2ast_B 125 LEGLRLSDPIVNTLA-----------------------------KNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNL 175 (336)
T ss_dssp CTTCBCCHHHHHHHT-----------------------------TCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEEC
T ss_pred CcCcccCHHHHHHHh-----------------------------cCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcC
Confidence 777766543333222 1456777777776 45542 4555667777888888
Q ss_pred CCC-cccCC-CCCCccccc-cceEEEccCC--ccc-ccCCccccccCCCcEEEcCCCC-CCCCchhhhcccCCCcEEecc
Q 003156 284 SSN-HLRSR-IPPELGYFH-SLIHLDLRNN--ALY-GSIPQEVCESRSLGILQLDGNS-LTGPIPQVIRNCTSLYLLSLS 356 (843)
Q Consensus 284 ~~N-~l~~~-~~~~~~~l~-~L~~L~L~~n--~l~-~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls 356 (843)
++| .+++. .+..+..++ +|++|++++| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|+.|+|+
T Consensus 176 ~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~ 255 (336)
T 2ast_B 176 SWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLS 255 (336)
T ss_dssp CCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred CCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCC
Confidence 887 77643 344566777 8888888888 444 4566777889999999999998 777788889999999999999
Q ss_pred ccc-ccccCCccccCCCCCCEEEccCCcccccCCcchhccc-ccceEeeccccceecCCC
Q 003156 357 HNH-LSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLA-SLLAVNVSYNRLIGRLPV 414 (843)
Q Consensus 357 ~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~~~~p~ 414 (843)
+|. +.......++++++|+.|+|++| ++ ...+..+. .+..|++++|++++..|.
T Consensus 256 ~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 256 RCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred CCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCC
Confidence 995 33222236888999999999999 33 33455553 488888999999998884
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=9.7e-24 Score=228.12 Aligned_cols=128 Identities=20% Similarity=0.210 Sum_probs=80.9
Q ss_pred CCEEecCCccCcccCchhhhcC--CCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCccccc-CCchhhcccCCcEEE
Q 003156 81 LRTLDLSHNLFSGSIPQGVAAL--HYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQ-LPVSLRLLNSMIFIS 157 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~ 157 (843)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. .+..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 566666666654 3455555 6777777777777755544 45677777777777777644 555666666777777
Q ss_pred eecCcccccCCCCccCCCCccEEEcccC-CcCC-CCCCCCCCCCCCcEEEecCC-cCC
Q 003156 158 VSNNTLTGDIPHWIGNISTLEFLDFSNN-HLTG-SLPSSLFNCKKLSVIRLRGN-SLN 212 (843)
Q Consensus 158 L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~i~~-~~~~~~~~l~~L~~L~L~~N-~l~ 212 (843)
|++|++++..+..++.+++|++|+|++| .+++ .++..+.++++|++|++++| .++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 7777666555556666666777777666 4543 13444555666666666666 554
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=4.9e-21 Score=207.69 Aligned_cols=240 Identities=17% Similarity=0.109 Sum_probs=135.3
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccC-CchhhcccCCcE-EEee
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQL-PVSLRLLNSMIF-ISVS 159 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~-L~L~ 159 (843)
+.++.++++++ .+|..+ .+++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+ +.+|.+++++.. +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45666677776 345433 246777777777777555566777777777777777765433 345666666554 4555
Q ss_pred cCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecC-CcCCCCCCchhhccCcceeeccCCcceecC
Q 003156 160 NNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRG-NSLNGNIPEGLFDLGLEEIDLSENGFMGSI 238 (843)
Q Consensus 160 ~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~ 238 (843)
.|+++...|..|.++++|++|++++|+++...+..+....++..|++.+ |.+. .++...+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~----------------- 150 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFV----------------- 150 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSST-----------------
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchh-----------------
Confidence 6677766667777777777777777777755555555566666666654 3343 22211110
Q ss_pred CCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCC-CcccCCCCCCccccccceEEEccCCcccccCC
Q 003156 239 PPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSS-NHLRSRIPPELGYFHSLIHLDLRNNALYGSIP 317 (843)
Q Consensus 239 p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 317 (843)
.....++.|+|++|+|+...+..| ...+|++|++++ |.++.+.++.|..+++|++|+|++|+|+...+
T Consensus 151 ----------~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 151 ----------GLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp ----------TSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred ----------hcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh
Confidence 011345566666666663333333 344566666653 55555444556666666666666666663322
Q ss_pred ccccccCCCcEEEcCCC-CCCCCchhhhcccCCCcEEecccc
Q 003156 318 QEVCESRSLGILQLDGN-SLTGPIPQVIRNCTSLYLLSLSHN 358 (843)
Q Consensus 318 ~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N 358 (843)
.. +.+|+.|.+.++ .++ .+| .+.++++|+.++++++
T Consensus 220 ~~---~~~L~~L~~l~~~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 220 YG---LENLKKLRARSTYNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp SS---CTTCCEEECTTCTTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred hh---hccchHhhhccCCCcC-cCC-CchhCcChhhCcCCCC
Confidence 22 233444443333 233 444 2555666666666544
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=3.6e-22 Score=208.67 Aligned_cols=142 Identities=18% Similarity=0.100 Sum_probs=114.3
Q ss_pred hhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-----------------cChHHHHHHHHHHHhccCCCccceee
Q 003156 557 EKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-----------------QYPEDFEREVRVLGKARHPNLISLEG 619 (843)
Q Consensus 557 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~h~niv~l~g 619 (843)
+..+.||+|+||.||+|.+ .+|+.||+|.+...... .....+.+|+.++++++ | +++.+
T Consensus 93 ~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~ 168 (282)
T 1zar_A 93 AIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK 168 (282)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred EecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence 3457899999999999999 68999999998543211 01356889999999999 5 66766
Q ss_pred EEEcCCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcE
Q 003156 620 YYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPR 699 (843)
Q Consensus 620 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 699 (843)
++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++ ++.+|
T Consensus 169 ~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vk 232 (282)
T 1zar_A 169 VYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIW 232 (282)
T ss_dssp EEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEE
T ss_pred EEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEE
Confidence 5543 45699999999999987 421 23457999999999999998 999999999999999 99999
Q ss_pred EeeccCcccccccccceeccccccccccCCcccc
Q 003156 700 ISDFGLARLLTRLDKHVMSNRFQSALGYVAPELT 733 (843)
Q Consensus 700 l~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 733 (843)
|+|||+++.. ..|+|||++
T Consensus 233 l~DFG~a~~~---------------~~~~a~e~l 251 (282)
T 1zar_A 233 IIDFPQSVEV---------------GEEGWREIL 251 (282)
T ss_dssp ECCCTTCEET---------------TSTTHHHHH
T ss_pred EEECCCCeEC---------------CCCCHHHHH
Confidence 9999999632 237888876
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=5.7e-21 Score=190.89 Aligned_cols=181 Identities=22% Similarity=0.191 Sum_probs=133.4
Q ss_pred cEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEE
Q 003156 5 KFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTL 84 (843)
Q Consensus 5 ~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L 84 (843)
+.+++++++++ .+|... .++|++|++++|+++.++...|..+++|++|+|++|++++.+. ..|..+++|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L 81 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN----GVFNKLTSLTYL 81 (208)
T ss_dssp TEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT----TTTTTCTTCCEE
T ss_pred CEEEecCCCcc-CCCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh----hhcCCCCCcCEE
Confidence 56778888887 777543 4578888888888888887778888888888888888775432 346677888888
Q ss_pred ecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCccc
Q 003156 85 DLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLT 164 (843)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 164 (843)
+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|+.|++++|.+.
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 88888887666666777888888888888887666666777788888888888877666666777777777777777665
Q ss_pred ccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCC
Q 003156 165 GDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKK 200 (843)
Q Consensus 165 ~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 200 (843)
+ .+++|+.|+++.|++++.+|..++.++.
T Consensus 162 ~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 162 C-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp C-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred c-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3 3456777777777777777776665543
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=5.4e-21 Score=217.94 Aligned_cols=189 Identities=29% Similarity=0.405 Sum_probs=119.0
Q ss_pred CCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccC
Q 003156 152 SMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSE 231 (843)
Q Consensus 152 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~ 231 (843)
+|+.|+|++|++++ +|..+ +++|++|+|++|.|+ .+| ..+++|+.|+|++|.|++ +|. +.
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~----------- 119 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LP----------- 119 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CC-----------
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hh-----------
Confidence 56666666666654 44433 255666666666666 344 335666666666666653 443 21
Q ss_pred CcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCc
Q 003156 232 NGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNA 311 (843)
Q Consensus 232 n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 311 (843)
.+|++|+|++|+|++ +|. .+++|+.|++++|.|++ +|. .+++|++|+|++|+
T Consensus 120 --------------------~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 120 --------------------ASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp --------------------TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred --------------------cCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 145555555555553 333 35566666666666654 333 34566677777777
Q ss_pred ccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCC-------cEEecccccccccCCccccCCCCCCEEEccCCcc
Q 003156 312 LYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSL-------YLLSLSHNHLSGSIPKSISNLNKLKILKLEFNEL 384 (843)
Q Consensus 312 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 384 (843)
|++ +|. |. ++|+.|+|++|.|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|
T Consensus 172 L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp CSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred CCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 664 454 44 67777777777777 4555 443 55 88888888888 6788787888888888888888
Q ss_pred cccCCcchhcccc
Q 003156 385 SGEIPQELGKLAS 397 (843)
Q Consensus 385 ~~~~p~~~~~l~~ 397 (843)
++.+|..+..+..
T Consensus 243 ~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 243 SSRIRESLSQQTA 255 (571)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CCcCHHHHHHhhc
Confidence 8888888877655
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=4.4e-21 Score=193.13 Aligned_cols=158 Identities=19% Similarity=0.192 Sum_probs=133.1
Q ss_pred cCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCC-CCccccccceEEEccCCcccccCCccccccCCCcEEEcC
Q 003156 254 LRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIP-PELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLD 332 (843)
Q Consensus 254 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 332 (843)
-+.+++++|.++ .+|..+. ..+++|+|++|.|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 357888888887 4666553 456888888888887754 457888889999999999987777788899999999999
Q ss_pred CCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecC
Q 003156 333 GNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRL 412 (843)
Q Consensus 333 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 412 (843)
+|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|++++|++++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888888899999999999999999888888999999999999999999888889999999999999999998776
Q ss_pred CC
Q 003156 413 PV 414 (843)
Q Consensus 413 p~ 414 (843)
+.
T Consensus 170 ~l 171 (220)
T 2v70_A 170 YL 171 (220)
T ss_dssp GG
T ss_pred ch
Confidence 63
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2.2e-20 Score=186.53 Aligned_cols=133 Identities=20% Similarity=0.176 Sum_probs=67.6
Q ss_pred cCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEee
Q 003156 80 RLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVS 159 (843)
Q Consensus 80 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 159 (843)
+|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44444444444443333344444555555555555544444444445555555555555554444444555555555555
Q ss_pred cCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCC
Q 003156 160 NNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLN 212 (843)
Q Consensus 160 ~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (843)
+|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+.
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 55555444444555555555555555555444444555555555555555554
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=4.7e-20 Score=210.18 Aligned_cols=180 Identities=31% Similarity=0.364 Sum_probs=92.4
Q ss_pred CCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCE
Q 003156 28 SLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKE 107 (843)
Q Consensus 28 ~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 107 (843)
+|+.|+|++|+|++++...+ ++|++|+|++|+|+.++ ..+++|++|+|++|+|++ +|. +.. +|++
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~---~~L~~L~Ls~N~l~~ip--------~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~ 124 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP---PQITVLEITQNALISLP--------ELPASLEYLDACDNRLST-LPE-LPA--SLKH 124 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC---TTCSEEECCSSCCSCCC--------CCCTTCCEEECCSSCCSC-CCC-CCT--TCCE
T ss_pred CccEEEeCCCCCCccCHhHc---CCCCEEECcCCCCcccc--------cccCCCCEEEccCCCCCC-cch-hhc--CCCE
Confidence 55555555555555544432 45555555555555322 123555555555555553 333 333 5555
Q ss_pred EEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCc
Q 003156 108 LLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHL 187 (843)
Q Consensus 108 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i 187 (843)
|+|++|.|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|++++ +|. |. ++|+.|+|++|+|
T Consensus 125 L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L 192 (571)
T 3cvr_A 125 LDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLL 192 (571)
T ss_dssp EECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCC
T ss_pred EECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCC
Confidence 5555555554 333 34555555555555554 222 34555555555555553 444 43 5555556655555
Q ss_pred CCCCCCCCCCCCCC-------cEEEecCCcCCCCCCchhhcc-CcceeeccCCcceecCC
Q 003156 188 TGSLPSSLFNCKKL-------SVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFMGSIP 239 (843)
Q Consensus 188 ~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p 239 (843)
+ .+|. +.. +| +.|+|++|.|+ .+|..++.+ +|+.|++++|.+.+.+|
T Consensus 193 ~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 193 E-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp S-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred C-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 5 3444 332 44 55666666555 455544444 45556666665555443
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=7.5e-20 Score=184.06 Aligned_cols=154 Identities=24% Similarity=0.333 Sum_probs=120.3
Q ss_pred CEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCC
Q 003156 255 RILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGN 334 (843)
Q Consensus 255 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 334 (843)
+.+++++|.++ .+|..+. ++|+.|++++|.|+++.+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 56777777777 4555443 57788888888887777777788888888888888888777778888888888888888
Q ss_pred CCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceec
Q 003156 335 SLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 335 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 411 (843)
.|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 88866666677888888888888888877777888888888888888888877777788888888888888887654
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.5e-20 Score=196.29 Aligned_cols=188 Identities=23% Similarity=0.295 Sum_probs=149.2
Q ss_pred cEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEE
Q 003156 5 KFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTL 84 (843)
Q Consensus 5 ~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L 84 (843)
..+.+..+.+++.++ +..+++|++|++++|.+..++. +..+++|++|+|++|++++..+ +..+++|++|
T Consensus 27 ~~~~l~~~~~~~~~~---~~~l~~L~~L~l~~~~i~~~~~--~~~l~~L~~L~L~~n~l~~~~~------l~~l~~L~~L 95 (291)
T 1h6t_A 27 IKDNLKKKSVTDAVT---QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKP------LANLKNLGWL 95 (291)
T ss_dssp HHHHTTCSCTTSEEC---HHHHHTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG------GTTCTTCCEE
T ss_pred HHHHhcCCCcccccc---hhhcCcccEEEccCCCcccChh--HhcCCCCCEEEccCCccCCCcc------cccCCCCCEE
Confidence 345667777773333 4567889999999999887754 7888999999999998885432 6778889999
Q ss_pred ecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCccc
Q 003156 85 DLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLT 164 (843)
Q Consensus 85 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 164 (843)
+|++|.+++ ++ .+..+++|++|+|++|++++. ..+..+++|++|++++|.+++. ..+..+++|+.|++++|+++
T Consensus 96 ~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 96 FLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp ECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred ECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 999998874 33 488889999999999988854 4577888999999999988865 67888889999999999888
Q ss_pred ccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCC
Q 003156 165 GDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNG 213 (843)
Q Consensus 165 ~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (843)
+..+ +..+++|++|+|++|.+++ ++ .+..+++|+.|++++|++..
T Consensus 170 ~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 170 DIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred cchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 6554 8888899999999998885 34 48888889999998888873
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=4e-20 Score=194.69 Aligned_cols=170 Identities=22% Similarity=0.280 Sum_probs=152.2
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
|++|+.|++++|+++ .++. |..+++|++|+|++|++.++++ |..+++|++|+|++|++++.+ .+..+++
T Consensus 45 l~~L~~L~l~~~~i~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~------~l~~l~~ 113 (291)
T 1h6t_A 45 LNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS------SLKDLKK 113 (291)
T ss_dssp HHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG------GGTTCTT
T ss_pred cCcccEEEccCCCcc-cChh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCCh------hhccCCC
Confidence 357999999999998 6764 7899999999999999998877 899999999999999998642 3778999
Q ss_pred CCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeec
Q 003156 81 LRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSN 160 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 160 (843)
|++|+|++|++++. ..+..+++|++|+|++|++++. ..+..+++|++|++++|.+++..+ +..+++|+.|++++
T Consensus 114 L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~ 187 (291)
T 1h6t_A 114 LKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 187 (291)
T ss_dssp CCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCC
Confidence 99999999999853 5689999999999999999965 568899999999999999997655 99999999999999
Q ss_pred CcccccCCCCccCCCCccEEEcccCCcCC
Q 003156 161 NTLTGDIPHWIGNISTLEFLDFSNNHLTG 189 (843)
Q Consensus 161 N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 189 (843)
|++++ ++ .+..+++|+.|++++|+++.
T Consensus 188 N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 188 NHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 99985 44 48999999999999999985
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=8.9e-20 Score=198.60 Aligned_cols=160 Identities=28% Similarity=0.196 Sum_probs=127.2
Q ss_pred CccCEEeCCCCccceeCCcccc-CCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEE
Q 003156 252 QTLRILDLSSNNLVGDIPAEMG-LFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQ 330 (843)
Q Consensus 252 ~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 330 (843)
+.++.|+|++|+|++..+..+. .+++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 4577888888888877777776 788888888888888887777888888888888888888877677788888888888
Q ss_pred cCCCCCCCCchhhhcccCCCcEEecccccccccCCccc---cCCCCCCEEEccCCcccccCCcchhcccc--cceEeecc
Q 003156 331 LDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSI---SNLNKLKILKLEFNELSGEIPQELGKLAS--LLAVNVSY 405 (843)
Q Consensus 331 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~l~ls~ 405 (843)
|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecC
Confidence 88888887778888888888888888888885444444 56888888888888888666677777776 37788888
Q ss_pred ccceec
Q 003156 406 NRLIGR 411 (843)
Q Consensus 406 N~l~~~ 411 (843)
|++...
T Consensus 199 N~~~C~ 204 (361)
T 2xot_A 199 NPLECD 204 (361)
T ss_dssp SCEECC
T ss_pred CCccCC
Confidence 887643
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=5.8e-20 Score=211.96 Aligned_cols=189 Identities=23% Similarity=0.285 Sum_probs=132.8
Q ss_pred ccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCE
Q 003156 4 MKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRT 83 (843)
Q Consensus 4 l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~ 83 (843)
+..+.|+.+.+.+.++ +..+++|+.|++++|.|..++. |..+++|++|+|++|+|++.++ +..+++|+.
T Consensus 23 l~~l~l~~~~i~~~~~---~~~L~~L~~L~l~~n~i~~l~~--l~~l~~L~~L~Ls~N~l~~~~~------l~~l~~L~~ 91 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT---QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKP------LTNLKNLGW 91 (605)
T ss_dssp HHHHHTTCSCTTSEEC---HHHHTTCCCCBCTTCCCCCCTT--GGGCTTCCEEECTTSCCCCCGG------GGGCTTCCE
T ss_pred HHHHhccCCCcccccc---hhcCCCCCEEECcCCCCCCChH--HccCCCCCEEEeeCCCCCCChh------hccCCCCCE
Confidence 3445666677763333 4567777778888887776653 6777788888888877775432 567777788
Q ss_pred EecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcc
Q 003156 84 LDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTL 163 (843)
Q Consensus 84 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 163 (843)
|+|++|.|.+ ++ .+..+++|++|+|++|.|++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++
T Consensus 92 L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l 165 (605)
T 1m9s_A 92 LFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 165 (605)
T ss_dssp EECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCC
T ss_pred EECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcC
Confidence 8888877764 33 577777777777777777743 3467777777777777777754 5677777777777777777
Q ss_pred cccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCC
Q 003156 164 TGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNG 213 (843)
Q Consensus 164 ~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (843)
.+..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+
T Consensus 166 ~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 166 SDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 76555 77777777777777777753 357777777777777777763
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=8.1e-20 Score=198.93 Aligned_cols=178 Identities=21% Similarity=0.117 Sum_probs=114.9
Q ss_pred cEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCcccc-CCccCCEEecCCccCcccCchhhhcCCCCCEE
Q 003156 30 RYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIW-SLKRLRTLDLSHNLFSGSIPQGVAALHYLKEL 108 (843)
Q Consensus 30 ~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 108 (843)
+.+++++|++..++.... +.+++|+|++|+|++.+. ..|. .+++|++|+|++|+|++..+..|..+++|++|
T Consensus 21 ~~l~c~~~~l~~iP~~~~---~~l~~L~Ls~N~l~~l~~----~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLP---SYTALLDLSHNNLSRLRA----EWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TEEECCSSCCSSCCSSCC---TTCSEEECCSSCCCEECT----TSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CEEEeCCCCcCccCccCC---CCCCEEECCCCCCCccCh----hhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 456666666666555432 346666666666664432 2344 56666666666666666555666666667777
Q ss_pred EcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCc---cCCCCccEEEcccC
Q 003156 109 LLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWI---GNISTLEFLDFSNN 185 (843)
Q Consensus 109 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~L~~N 185 (843)
+|++|+|+...+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|+++...+..| ..+++|+.|+|++|
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 777766666666666666777777777777766666667777777777777777764444444 56778888888888
Q ss_pred CcCCCCCCCCCCCCC--CcEEEecCCcCCCC
Q 003156 186 HLTGSLPSSLFNCKK--LSVIRLRGNSLNGN 214 (843)
Q Consensus 186 ~i~~~~~~~~~~l~~--L~~L~L~~N~l~~~ 214 (843)
+|+...+..+..++. |+.|+|++|++...
T Consensus 174 ~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 174 KLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 888655556666665 47788888888743
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=2.9e-19 Score=181.04 Aligned_cols=157 Identities=24% Similarity=0.215 Sum_probs=116.0
Q ss_pred ccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcC
Q 003156 253 TLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLD 332 (843)
Q Consensus 253 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 332 (843)
+.+.++.+++.++ .+|..+. ++|++|+|++|.|+++.|..|..+++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 3556777777776 4555443 677777777777777777777777777777777777775555566777778888888
Q ss_pred CCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecC
Q 003156 333 GNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRL 412 (843)
Q Consensus 333 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 412 (843)
+|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|++++|++.+..
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 88877666666777788888888888877 67777777788888888888887666667777778888888888777655
Q ss_pred C
Q 003156 413 P 413 (843)
Q Consensus 413 p 413 (843)
+
T Consensus 176 ~ 176 (229)
T 3e6j_A 176 R 176 (229)
T ss_dssp G
T ss_pred c
Confidence 4
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=4.4e-19 Score=178.45 Aligned_cols=156 Identities=17% Similarity=0.163 Sum_probs=119.2
Q ss_pred CEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCc-hhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEE
Q 003156 54 NTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIP-QGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTL 132 (843)
Q Consensus 54 ~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 132 (843)
+++++++|.++.++... ...+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|
T Consensus 14 ~~l~~s~n~l~~iP~~~-------~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHI-------PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TEEECCSSCCSSCCSCC-------CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CEeEeCCCCcccCccCC-------CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 35666666666543321 1345677777777765533 457777788888888888877777778888888888
Q ss_pred EccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCC
Q 003156 133 DLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLN 212 (843)
Q Consensus 133 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (843)
+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++.
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 88888888777777888888888888888888777888888888999999999998877888888999999999999887
Q ss_pred CCCC
Q 003156 213 GNIP 216 (843)
Q Consensus 213 ~~~p 216 (843)
+..+
T Consensus 167 c~c~ 170 (220)
T 2v70_A 167 CNCY 170 (220)
T ss_dssp CSGG
T ss_pred CCCc
Confidence 6554
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=2.3e-19 Score=207.01 Aligned_cols=175 Identities=22% Similarity=0.268 Sum_probs=155.2
Q ss_pred CCCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCcc
Q 003156 1 MMNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKR 80 (843)
Q Consensus 1 ~~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~ 80 (843)
|++|+.|+|++|.|. .++. |..+++|+.|+|++|.|.++++ |..+++|++|+|++|+|++.+ .+..+++
T Consensus 42 L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~------~l~~l~~ 110 (605)
T 1m9s_A 42 LNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS------SLKDLKK 110 (605)
T ss_dssp HTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT------TSTTCTT
T ss_pred CCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh------hhccCCC
Confidence 468999999999998 7773 7899999999999999998887 899999999999999998643 4778999
Q ss_pred CCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeec
Q 003156 81 LRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSN 160 (843)
Q Consensus 81 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 160 (843)
|+.|+|++|+|.+ + ..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++
T Consensus 111 L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 184 (605)
T 1m9s_A 111 LKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 184 (605)
T ss_dssp CCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcC
Confidence 9999999999985 3 4689999999999999999965 568899999999999999997766 99999999999999
Q ss_pred CcccccCCCCccCCCCccEEEcccCCcCCCCCCC
Q 003156 161 NTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSS 194 (843)
Q Consensus 161 N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~ 194 (843)
|++++. ..+..+++|+.|+|++|.+.+.....
T Consensus 185 N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~ 216 (605)
T 1m9s_A 185 NHISDL--RALAGLKNLDVLELFSQECLNKPINH 216 (605)
T ss_dssp SCCCBC--GGGTTCTTCSEEECCSEEEECCCCCC
T ss_pred CCCCCC--hHHccCCCCCEEEccCCcCcCCcccc
Confidence 999864 35899999999999999998643333
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=8.7e-19 Score=176.29 Aligned_cols=135 Identities=17% Similarity=0.176 Sum_probs=88.3
Q ss_pred ccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEe
Q 003156 79 KRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISV 158 (843)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 158 (843)
++|++|+|++|+|+...+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|.|+.+.+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 34555666666655555555666666666666666666555666666666666666666666555555666666666666
Q ss_pred ecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCC
Q 003156 159 SNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNG 213 (843)
Q Consensus 159 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (843)
++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 6666666666667777777777777777776666667777777777777777754
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=3.9e-18 Score=172.72 Aligned_cols=156 Identities=22% Similarity=0.184 Sum_probs=114.3
Q ss_pred CCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEE
Q 003156 53 LNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTL 132 (843)
Q Consensus 53 L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 132 (843)
-+.++.+++.++..+..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..+++|++|
T Consensus 21 ~~~v~c~~~~l~~ip~~~-------~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGI-------PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp TTEEECTTSCCSSCCSCC-------CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEeEccCCCcCccCCCC-------CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 445666666666544321 1567777777777776666777777777777777777776655666777777777
Q ss_pred EccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCC
Q 003156 133 DLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLN 212 (843)
Q Consensus 133 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (843)
+|++|+|++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|+...+..|..+++|+.|+|++|++.
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 77777777666667777777778888888777 66777888888888888888888766677888888888888888887
Q ss_pred CCCC
Q 003156 213 GNIP 216 (843)
Q Consensus 213 ~~~p 216 (843)
+..+
T Consensus 173 c~c~ 176 (229)
T 3e6j_A 173 CECR 176 (229)
T ss_dssp TTBG
T ss_pred CCcc
Confidence 6544
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=2.7e-21 Score=221.80 Aligned_cols=201 Identities=25% Similarity=0.256 Sum_probs=129.1
Q ss_pred CCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCc-------------CCCCCCchhhcc-Ccceee-ccCCcceecC
Q 003156 174 ISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNS-------------LNGNIPEGLFDL-GLEEID-LSENGFMGSI 238 (843)
Q Consensus 174 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~~-~L~~L~-l~~n~l~~~~ 238 (843)
+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+..|..+..+ +|+.|+ ++.|.+
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~---- 422 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL---- 422 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH----
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc----
Confidence 444555555555554 344455555555555544432 333444444443 455565 444433
Q ss_pred CCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCc
Q 003156 239 PPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQ 318 (843)
Q Consensus 239 p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 318 (843)
.+|+.+.+++|.++...+ ..|+.|+|++|.|++ +|. |+.+++|+.|+|++|+|+ .+|.
T Consensus 423 -------------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~ 480 (567)
T 1dce_A 423 -------------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPP 480 (567)
T ss_dssp -------------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCG
T ss_pred -------------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccch
Confidence 245556666666663322 247778888888876 344 777778888888888887 6777
Q ss_pred cccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccC-CccccCCCCCCEEEccCCcccccCCcc---hhc
Q 003156 319 EVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSI-PKSISNLNKLKILKLEFNELSGEIPQE---LGK 394 (843)
Q Consensus 319 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~ 394 (843)
.++.+++|+.|+|++|.|++ +| .|+++++|+.|+|++|+|++.. |..|+.|++|+.|+|++|+|++.+|.. +..
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~ 558 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 558 (567)
T ss_dssp GGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHH
T ss_pred hhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHH
Confidence 78888888888888888875 56 6778888888888888887665 777888888888888888887655432 334
Q ss_pred ccccceEee
Q 003156 395 LASLLAVNV 403 (843)
Q Consensus 395 l~~L~~l~l 403 (843)
+++|+.||+
T Consensus 559 lp~L~~L~l 567 (567)
T 1dce_A 559 LPSVSSILT 567 (567)
T ss_dssp CTTCSEEEC
T ss_pred CcccCccCC
Confidence 677777754
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.3e-18 Score=171.97 Aligned_cols=154 Identities=16% Similarity=0.245 Sum_probs=135.8
Q ss_pred cccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcE
Q 003156 249 TLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGI 328 (843)
Q Consensus 249 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 328 (843)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45788999999999998 566 68899999999999998764 357889999999999999999888899999999999
Q ss_pred EEcCCCCCCCCchhhhcccCCCcEEeccccc-ccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeecccc
Q 003156 329 LQLDGNSLTGPIPQVIRNCTSLYLLSLSHNH-LSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNR 407 (843)
Q Consensus 329 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~ 407 (843)
|++++|.+++..|..|..+++|+.|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 9999999998889999999999999999998 65 666 69999999999999999995 44 78999999999999999
Q ss_pred cee
Q 003156 408 LIG 410 (843)
Q Consensus 408 l~~ 410 (843)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 764
No 368
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=1.9e-18 Score=169.78 Aligned_cols=132 Identities=26% Similarity=0.339 Sum_probs=91.2
Q ss_pred CEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCC-CccccccceEEEccCCcccccCCccccccCCCcEEEcCC
Q 003156 255 RILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPP-ELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDG 333 (843)
Q Consensus 255 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 333 (843)
+.+++++|.++ .+|..+.. +|++|++++|.|+++.+. .|..+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777775 55654432 677777777777665553 366777777777777777766666777777777777777
Q ss_pred CCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCC
Q 003156 334 NSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIP 389 (843)
Q Consensus 334 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 389 (843)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 77776666667777777777777777776667777777777777777777765543
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=6e-19 Score=182.65 Aligned_cols=169 Identities=27% Similarity=0.309 Sum_probs=107.3
Q ss_pred CCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCC
Q 003156 26 CASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYL 105 (843)
Q Consensus 26 l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 105 (843)
+.++..+++++|.+..+. .+..+++|++|++++|.|+..+ .+..+++|++|+|++|+|++..+ +..+++|
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~------~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L 87 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA------GMQFFTNLKELHLSHNQISDLSP--LKDLTKL 87 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT------TGGGCTTCCEEECCSSCCCCCGG--GTTCSSC
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch------HHhhCCCCCEEECCCCccCCChh--hccCCCC
Confidence 345556666666666555 3556666666666666665332 24556666666666666664333 6666667
Q ss_pred CEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccC
Q 003156 106 KELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNN 185 (843)
Q Consensus 106 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 185 (843)
++|+|++|++++. |. +.. ++|++|+|++|++++. ..+..+++|+.|+|++|++++. + .++.+++|++|+|++|
T Consensus 88 ~~L~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N 160 (263)
T 1xeu_A 88 EELSVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGN 160 (263)
T ss_dssp CEEECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTS
T ss_pred CEEECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCC
Confidence 7777777766643 22 222 6677777777777643 2466677777777777777643 2 4667777777777777
Q ss_pred CcCCCCCCCCCCCCCCcEEEecCCcCCC
Q 003156 186 HLTGSLPSSLFNCKKLSVIRLRGNSLNG 213 (843)
Q Consensus 186 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (843)
++++. ..+..+++|+.|++++|.+.+
T Consensus 161 ~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 161 EITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred cCcch--HHhccCCCCCEEeCCCCcccC
Confidence 77754 567777777777777777764
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=3.4e-21 Score=221.00 Aligned_cols=217 Identities=23% Similarity=0.198 Sum_probs=164.1
Q ss_pred CCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcE
Q 003156 124 GFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSV 203 (843)
Q Consensus 124 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 203 (843)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|......|. .+..+.+.+..|..+.++++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 55778888888888887 6677888888888888765542101110 00111233455666666777777
Q ss_pred EE-ecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEE
Q 003156 204 IR-LRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLN 282 (843)
Q Consensus 204 L~-L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 282 (843)
|+ ++.|.+. +|..+.+++|.+.... ...|+.|+|++|.|++ +|. ++.+++|+.|+
T Consensus 414 L~~l~~n~~~----------~L~~l~l~~n~i~~l~------------~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~ 469 (567)
T 1dce_A 414 VDPMRAAYLD----------DLRSKFLLENSVLKME------------YADVRVLHLAHKDLTV-LCH-LEQLLLVTHLD 469 (567)
T ss_dssp HCGGGHHHHH----------HHHHHHHHHHHHHHHH------------HTTCSEEECTTSCCSS-CCC-GGGGTTCCEEE
T ss_pred Ccchhhcccc----------hhhhhhhhcccccccC------------ccCceEEEecCCCCCC-CcC-ccccccCcEee
Confidence 76 5555442 3555666677665321 1358999999999995 676 99999999999
Q ss_pred cCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCc-hhhhcccCCCcEEeccccccc
Q 003156 283 LSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPI-PQVIRNCTSLYLLSLSHNHLS 361 (843)
Q Consensus 283 L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 361 (843)
|++|.|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..|+++++|+.|+|++|+|+
T Consensus 470 Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 470 LSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp CCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 9999998 578899999999999999999996 66 8999999999999999999876 999999999999999999999
Q ss_pred ccCCcc---ccCCCCCCEEEc
Q 003156 362 GSIPKS---ISNLNKLKILKL 379 (843)
Q Consensus 362 ~~~p~~---~~~l~~L~~L~L 379 (843)
+..|.. +..+++|+.|++
T Consensus 547 ~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 547 QEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GSSSCTTHHHHHCTTCSEEEC
T ss_pred CCccHHHHHHHHCcccCccCC
Confidence 665532 234899999975
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=9.2e-19 Score=172.09 Aligned_cols=157 Identities=24% Similarity=0.254 Sum_probs=132.9
Q ss_pred CcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCc-cccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecc
Q 003156 278 LRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQ-EVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLS 356 (843)
Q Consensus 278 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 356 (843)
-+++++++|.++. +|..+. .+|++|++++|+|++..+. .|..+++|++|+|++|.|++..|..|.++++|+.|+|+
T Consensus 10 ~~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 3789999999975 555443 3899999999999976664 48999999999999999999989999999999999999
Q ss_pred cccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecCCCCCCCCCCCCCCcCCCCCCCCCC
Q 003156 357 HNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPVGGVFPTLDQSSLQGNLGICSPL 436 (843)
Q Consensus 357 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 436 (843)
+|+|++..|..|.++++|++|+|++|+|++.+|..+..+++|+.|+|++|++++..+.......+....+.++...|+.|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999888888999999999999999999999999999999999999999999887742221223333455666677655
Q ss_pred C
Q 003156 437 L 437 (843)
Q Consensus 437 ~ 437 (843)
.
T Consensus 167 ~ 167 (192)
T 1w8a_A 167 S 167 (192)
T ss_dssp T
T ss_pred h
Confidence 3
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=7.6e-19 Score=207.96 Aligned_cols=191 Identities=24% Similarity=0.351 Sum_probs=118.1
Q ss_pred EcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCC
Q 003156 181 DFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLS 260 (843)
Q Consensus 181 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~ 260 (843)
++..|.+. ..++.+..+++|+.|+|++|.+. .+|..++. +++|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~-----------------------------l~~L~~L~Ls 255 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFK-----------------------------YDFLTRLYLN 255 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGG-----------------------------CCSCSCCBCT
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcC-----------------------------CCCCCEEEee
Confidence 45556665 56777888888888888888887 56554432 4678888888
Q ss_pred CCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCc
Q 003156 261 SNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPI 340 (843)
Q Consensus 261 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 340 (843)
+|.|+ .+|..|+.+++|++|+|++|.|+ .+|..|+.+.+|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+
T Consensus 256 ~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 332 (727)
T 4b8c_D 256 GNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332 (727)
T ss_dssp TSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHH
T ss_pred CCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCC
Confidence 88888 78888899999999999999998 56888999999999999999998 77888999999999999999999999
Q ss_pred hhhhcccCC-CcEEecccccccccCCccccCCCCCCEEEccCC--------cccccCCcchhcccccceEeeccccceec
Q 003156 341 PQVIRNCTS-LYLLSLSHNHLSGSIPKSISNLNKLKILKLEFN--------ELSGEIPQELGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 341 p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N--------~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 411 (843)
|..+..+.. +..|+|++|.+++.+|.. |+.|++++| .|.+..+..+.++..+....+++|-+.+.
T Consensus 333 p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 333 LKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CCCGG
T ss_pred hHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeeccccccc
Confidence 988876533 335889999999888864 456667776 44444455556666667777777766543
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=4e-19 Score=210.31 Aligned_cols=195 Identities=22% Similarity=0.223 Sum_probs=121.0
Q ss_pred CCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCC
Q 003156 27 ASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLK 106 (843)
Q Consensus 27 ~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 106 (843)
+.+++|+|.+|.+..++. ..|+.++|+.|.|. .++++.|.+. ..++.|..+++|+
T Consensus 173 ~~~~~l~L~~n~~~~~~~------~~l~~l~Ls~~~i~------------------~~~~~~n~~~-~~~~~~~~l~~L~ 227 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQ------ALLQHKKLSQYSID------------------EDDDIENRMV-MPKDSKYDDQLWH 227 (727)
T ss_dssp --------------------------------------------------------------------------CCCCCC
T ss_pred CccceEEeeCCCCCcchh------hHhhcCccCccccc------------------Ccccccccee-cChhhhccCCCCc
Confidence 456677777777665433 23455666666543 3355566666 6788899999999
Q ss_pred EEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCC
Q 003156 107 ELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNH 186 (843)
Q Consensus 107 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 186 (843)
.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+ .+|..|+++++|++|+|++|.
T Consensus 228 ~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 9999999998 56666778999999999999999 78889999999999999999999 779999999999999999999
Q ss_pred cCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccC--cceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCC
Q 003156 187 LTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLG--LEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSN 262 (843)
Q Consensus 187 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~--L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n 262 (843)
|+ .+|..|..+++|+.|+|++|.|++.+|..+.... ...+++++|.+.+.+|. .|+.|+++.|
T Consensus 305 l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------------~l~~l~l~~n 369 (727)
T 4b8c_D 305 VT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------------ERRFIEINTD 369 (727)
T ss_dssp CC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------------C---------
T ss_pred CC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------------ccceeEeecc
Confidence 98 6788899999999999999999988888876653 34578999999877664 4677777777
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.7e-18 Score=179.20 Aligned_cols=169 Identities=16% Similarity=0.268 Sum_probs=145.4
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
+++..++|++|.++ .++ .|..+++|++|++++|+|..++ .+..+++|++|+|++|+|++.++ +..+++|
T Consensus 19 ~~l~~l~l~~~~i~-~~~--~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~------l~~l~~L 87 (263)
T 1xeu_A 19 ANAVKQNLGKQSVT-DLV--SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSP------LKDLTKL 87 (263)
T ss_dssp HHHHHHHHTCSCTT-SEE--CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG------GTTCSSC
T ss_pred HHHHHHHhcCCCcc-ccc--chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChh------hccCCCC
Confidence 34677889999998 666 3788999999999999999887 48899999999999999986533 7789999
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecC
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNN 161 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 161 (843)
++|+|++|++++ ++. +.. ++|++|+|++|++++. + .+..+++|++|+|++|++++. ..+..+++|+.|+|++|
T Consensus 88 ~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N 160 (263)
T 1xeu_A 88 EELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGN 160 (263)
T ss_dssp CEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTS
T ss_pred CEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCC
Confidence 999999999985 443 333 8999999999999864 3 588999999999999999965 37899999999999999
Q ss_pred cccccCCCCccCCCCccEEEcccCCcCCC
Q 003156 162 TLTGDIPHWIGNISTLEFLDFSNNHLTGS 190 (843)
Q Consensus 162 ~l~~~~p~~~~~l~~L~~L~L~~N~i~~~ 190 (843)
++++. ..+..+++|+.|++++|.++..
T Consensus 161 ~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 161 EITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred cCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 99966 6789999999999999999854
No 375
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=3.4e-18 Score=176.42 Aligned_cols=138 Identities=19% Similarity=0.168 Sum_probs=105.9
Q ss_pred hhhcCeeccccceEEEEEEECCCCeE--EEEEEeecCCcc-c----------------------ChHHHHHHHHHHHhcc
Q 003156 556 LEKAAEVGEGVFGTVYKVSFGTQGRM--LAVKKLVTSDII-Q----------------------YPEDFEREVRVLGKAR 610 (843)
Q Consensus 556 ~~~~~~ig~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~-~----------------------~~~~~~~E~~~l~~l~ 610 (843)
++..+.||+|+||.||+|.+..+|+. ||||.+...... . ....+.+|+.++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 34456899999999999999557888 999987443111 0 0125789999999998
Q ss_pred CCCc--cceeeEEEcCCeeEEEEEeCCC-C----CHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhh-hcCCCCeee
Q 003156 611 HPNL--ISLEGYYWTPQLKLLVSDYAPN-G----SLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLH-HSFRPPIIH 682 (843)
Q Consensus 611 h~ni--v~l~g~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH 682 (843)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8864 333332 346899999942 4 67666443 234567899999999999999 77 9999
Q ss_pred cCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 683 YNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 683 ~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
|||||+|||+++ .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.3e-18 Score=187.04 Aligned_cols=288 Identities=15% Similarity=0.139 Sum_probs=160.2
Q ss_pred CCCCcEEEccCccccccccccccC-CCCCCEEECCCCCCc--cccCCCcCccccCCccCCEEecCCccCcccCchhhhc-
Q 003156 26 CASLRYLSLAGNILQGPIGKIFNY-CSSLNTLNLSNNHFS--GDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAA- 101 (843)
Q Consensus 26 l~~L~~L~L~~n~i~~~~~~~f~~-l~~L~~L~Ls~N~i~--~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~- 101 (843)
+.++++|.++++ +....-..+.. +++|++|||++|+|. .... ..++.++.+.+..|. +....|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~-------~~~~~~~~~~~~~~~---I~~~aF~~~ 92 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKA-------GTYPNGKFYIYMANF---VPAYAFSNV 92 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESS-------SSSGGGCCEEECTTE---ECTTTTEEE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcc-------ccccccccccccccc---cCHHHhccc
Confidence 457888888764 22222222333 677888888888776 2111 112224555555553 33455555
Q ss_pred -------CCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCC
Q 003156 102 -------LHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNI 174 (843)
Q Consensus 102 -------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 174 (843)
+++|++|+|.+ .++.+.+..|.+|++|++|++++|.+..+.+.+|.. +
T Consensus 93 ~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~------------------------~ 147 (329)
T 3sb4_A 93 VNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALAD------------------------S 147 (329)
T ss_dssp ETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCT------------------------T
T ss_pred ccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcC------------------------C
Confidence 66677776666 666566666666666666666666665555555544 4
Q ss_pred CCccEEEcccC----CcCCCCCCCCCCCCCCc-EEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCccc
Q 003156 175 STLEFLDFSNN----HLTGSLPSSLFNCKKLS-VIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSST 249 (843)
Q Consensus 175 ~~L~~L~L~~N----~i~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~ 249 (843)
.++..+.+..+ ........+|.++.+|+ .+.+.... .++..++... .
T Consensus 148 ~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~-------------------------~ 199 (329)
T 3sb4_A 148 VTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAG-------------------------L 199 (329)
T ss_dssp TCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTT-------------------------C
T ss_pred CceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhhcc-------------------------c
Confidence 44444433331 11223344555666665 44443221 2233222110 0
Q ss_pred ccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCc-E
Q 003156 250 LFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLG-I 328 (843)
Q Consensus 250 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-~ 328 (843)
...++..+.+.++-...........+++|+.|++++|.++.+.+.+|.++.+|+.|+|.+| ++...+..|.++.+|+ .
T Consensus 200 ~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~ 278 (329)
T 3sb4_A 200 QPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGT 278 (329)
T ss_dssp CGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred CccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEE
Confidence 0223334443333111111111112466777777776676666666777777777777766 6655566677777777 7
Q ss_pred EEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEc
Q 003156 329 LQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKL 379 (843)
Q Consensus 329 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 379 (843)
|++.+ .++.+.+..|.+|++|+.|++++|+++...+.+|.++++|+.|+.
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 77776 566566677777777777777777777666667777777777753
No 377
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=6.5e-18 Score=166.92 Aligned_cols=178 Identities=17% Similarity=0.178 Sum_probs=135.8
Q ss_pred cCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCc
Q 003156 17 PVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIP 96 (843)
Q Consensus 17 ~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 96 (843)
.+|+..|... ....+..+....+. ...+++|++|++++|.++..+ .+..+++|++|++++|.+. .+
T Consensus 16 ~~pd~~~~~~---~~~~~~~~~~~~i~---~~~l~~L~~L~l~~n~i~~l~------~l~~l~~L~~L~l~~n~~~--~~ 81 (197)
T 4ezg_A 16 NIPDSTFKAY---LNGLLGQSSTANIT---EAQMNSLTYITLANINVTDLT------GIEYAHNIKDLTINNIHAT--NY 81 (197)
T ss_dssp CCCCHHHHHH---HHHHHTCCTTCCCB---HHHHHTCCEEEEESSCCSCCT------TGGGCTTCSEEEEESCCCS--CC
T ss_pred ecCcHHHHHH---HHHHhCCCccccCC---hhhcCCccEEeccCCCccChH------HHhcCCCCCEEEccCCCCC--cc
Confidence 5676655432 22223333333332 356778889999998887432 3667888999999999776 33
Q ss_pred hhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCc-ccccCCCCccCCC
Q 003156 97 QGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNT-LTGDIPHWIGNIS 175 (843)
Q Consensus 97 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~ 175 (843)
..+..+++|++|+|++|.+++..+..+..+++|++|++++|.+++..+..+..+++|++|++++|+ +. .+| .+..++
T Consensus 82 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~ 159 (197)
T 4ezg_A 82 NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLP 159 (197)
T ss_dssp GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCS
T ss_pred hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCC
Confidence 478889999999999999987778889999999999999999988778888999999999999998 65 455 688899
Q ss_pred CccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCC
Q 003156 176 TLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLN 212 (843)
Q Consensus 176 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (843)
+|++|++++|++++ ++ .+..+++|+.|++++|++.
T Consensus 160 ~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 160 ELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp SCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 99999999999985 34 7888999999999999886
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.6e-18 Score=184.59 Aligned_cols=290 Identities=12% Similarity=0.087 Sum_probs=199.4
Q ss_pred CccCCEEecCCccCcccCchhhhc-CCCCCEEEcCCCccc--ccCCCCCCCCCCCcEEEccCCcccccCCchhhc-----
Q 003156 78 LKRLRTLDLSHNLFSGSIPQGVAA-LHYLKELLLQGNQFS--GPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRL----- 149 (843)
Q Consensus 78 l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----- 149 (843)
+.+|+.|.++++- .......+.. +++|++|+|++|+|. ...... ++.+..+++..|. +.+.+|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccc---ccccccccccccc---cCHHHhccccccc
Confidence 4567777776542 2112223333 677888888888876 222222 2335566666664 44567777
Q ss_pred ---ccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcce
Q 003156 150 ---LNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEE 226 (843)
Q Consensus 150 ---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~ 226 (843)
+++|+.|.|.+ +++.+.+.+|.++++|+.|++++|.++.+.+.+|.++.++..+.+..+...... . .
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~-~-----~--- 166 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFK-N-----R--- 166 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTS-T-----T---
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcc-c-----c---
Confidence 99999999999 888788889999999999999999998888899999888877766553221000 0 0
Q ss_pred eeccCCcceecCCCCCCCCCcccccCccC-EEeCCCCc-cceeCCccccCCCCCcEEEcCCCcccCCCCCCc-cccccce
Q 003156 227 IDLSENGFMGSIPPGSSSSSSSTLFQTLR-ILDLSSNN-LVGDIPAEMGLFANLRYLNLSSNHLRSRIPPEL-GYFHSLI 303 (843)
Q Consensus 227 L~l~~n~l~~~~p~~~~~~~~~~~l~~L~-~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~ 303 (843)
+....+ .....|+ .+.+.... +.......-....++..+.+.++-.. .....+ ..+++|+
T Consensus 167 --i~~~~f--------------~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~ 229 (329)
T 3sb4_A 167 --WEHFAF--------------IEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLV 229 (329)
T ss_dssp --TTTSCE--------------EESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCC
T ss_pred --cccccc--------------ccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCe
Confidence 000011 0112233 23332211 11111111123456777777765321 111111 2378999
Q ss_pred EEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCc-EEecccccccccCCccccCCCCCCEEEccCC
Q 003156 304 HLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLY-LLSLSHNHLSGSIPKSISNLNKLKILKLEFN 382 (843)
Q Consensus 304 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 382 (843)
.|+|++|+++...+..|.++++|+.|+|.+| ++.+.+..|.+|++|+ .|++.+ .++...+.+|.++++|+.|++++|
T Consensus 230 ~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n 307 (329)
T 3sb4_A 230 SLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGD 307 (329)
T ss_dssp EEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSS
T ss_pred EEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCC
Confidence 9999999999777788999999999999998 8877788999999999 999999 787677899999999999999999
Q ss_pred cccccCCcchhcccccceEee
Q 003156 383 ELSGEIPQELGKLASLLAVNV 403 (843)
Q Consensus 383 ~l~~~~p~~~~~l~~L~~l~l 403 (843)
+++...+.+|.++++|+.+..
T Consensus 308 ~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 308 KITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCCEECTTTTCTTCCCCEEEC
T ss_pred ccCccchhhhcCCcchhhhcc
Confidence 999888889999999998864
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.72 E-value=5.3e-16 Score=170.03 Aligned_cols=147 Identities=11% Similarity=0.115 Sum_probs=69.8
Q ss_pred ccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCC
Q 003156 47 FNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFC 126 (843)
Q Consensus 47 f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 126 (843)
+..+..++++.+.++ ++. +...+|.+ .+|+.+++..+ ++.+...+|.+ .+|+.+.|.. .++.+.+..|.++
T Consensus 109 ~~~~~~l~~i~ip~~-i~~----I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c 179 (401)
T 4fdw_A 109 TEILKGYNEIILPNS-VKS----IPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYC 179 (401)
T ss_dssp EEECSSCSEEECCTT-CCE----ECTTTTTT-CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTC
T ss_pred EEecCCccEEEECCc-cCE----ehHhhccc-CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCc
Confidence 334445555555442 222 22233444 24555555444 44344444544 2455555553 4444444555555
Q ss_pred CCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEe
Q 003156 127 PHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRL 206 (843)
Q Consensus 127 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 206 (843)
++|+.+++++|+++.+...+|. ..+|+.+.|.++ +..+...+|.++++|+.++|.+| ++.+...+|.+ .+|+.+.+
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 5555555555555544444444 245555555532 44444555555555555555543 33344444444 44555554
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.71 E-value=3.6e-16 Score=171.40 Aligned_cols=275 Identities=9% Similarity=0.080 Sum_probs=193.7
Q ss_pred hhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhc
Q 003156 22 LFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAA 101 (843)
Q Consensus 22 ~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 101 (843)
+|..+..++.+.+.+ .+..|....|.++ +|+.++|.+| +.. +...+|.+ .+|+.+.+.. .+..+...+|.+
T Consensus 108 ~~~~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~----I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~ 178 (401)
T 4fdw_A 108 LTEILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKS----IGDMAFFN-STVQEIVFPS-TLEQLKEDIFYY 178 (401)
T ss_dssp EEEECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCE----ECTTTTTT-CCCCEEECCT-TCCEECSSTTTT
T ss_pred EEEecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccE----ECHHhcCC-CCceEEEeCC-CccEehHHHhhC
Confidence 345567777777753 5677777788774 6888888766 553 33345666 4688888875 566666777888
Q ss_pred CCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCCccEEE
Q 003156 102 LHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNISTLEFLD 181 (843)
Q Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 181 (843)
+.+|+.++|.+|.++.+....|. +.+|+.+.|.++ ++.+...+|.++++|+.+.+..| ++.+...+|.+ .+|+.+.
T Consensus 179 c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~ 254 (401)
T 4fdw_A 179 CYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVK 254 (401)
T ss_dssp CTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEE
T ss_pred cccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEE
Confidence 88888888888888766666666 578888888744 66677778888888888888764 55566677777 7788888
Q ss_pred cccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCC
Q 003156 182 FSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSS 261 (843)
Q Consensus 182 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~ 261 (843)
| .+.++.+...+|.+|++|+.+.+.+|.+..... . .++.. .+..+++|+.++|.
T Consensus 255 l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~--------~-----------~I~~~-----aF~~c~~L~~l~l~- 308 (401)
T 4fdw_A 255 L-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPE--------A-----------MIHPY-----CLEGCPKLARFEIP- 308 (401)
T ss_dssp E-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTT--------C-----------EECTT-----TTTTCTTCCEECCC-
T ss_pred e-CCCccEEChhHhhCCCCCCEEEeCCccccCCcc--------c-----------EECHH-----HhhCCccCCeEEeC-
Confidence 8 455665667788888888888888876641000 0 01111 12235678888887
Q ss_pred CccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccC-CCcEEEcCCCCCC
Q 003156 262 NNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESR-SLGILQLDGNSLT 337 (843)
Q Consensus 262 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 337 (843)
+.++......|.++++|+.+.+..| ++.+...+|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 309 ~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 309 ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 4466667778888888888888655 666777888888 888888888888766666777774 6788888776544
No 381
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.71 E-value=4e-16 Score=171.90 Aligned_cols=332 Identities=13% Similarity=0.091 Sum_probs=182.8
Q ss_pred cCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCc
Q 003156 17 PVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIP 96 (843)
Q Consensus 17 ~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 96 (843)
+|...+|.+|.+|+++.|.. .++.|...+|.++++|+.++|.++ +.. +...+|.++.+|+.+.+..+ +.....
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~----I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKM----IGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCE----ECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceE----ccchhhcccccchhhcccCc-eeeecc
Confidence 46666677777777777753 366666777777777777777654 332 23345666666666666543 333455
Q ss_pred hhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCCC
Q 003156 97 QGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNIST 176 (843)
Q Consensus 97 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 176 (843)
.+|.+...++........ ......|.++++|+.+.+.++. ..+....|.+..+|+.+.+..| +..+...+|.++..
T Consensus 134 ~aF~~~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~ 209 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEGVT--VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECIL 209 (394)
T ss_dssp TTTTTCCCSEEECCTTCC--EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccccccCcccc--ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccc
Confidence 556555433333322222 2334556666666666665443 2244555555666666555544 33344455555555
Q ss_pred ccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccccCccCE
Q 003156 177 LEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRI 256 (843)
Q Consensus 177 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~ 256 (843)
|+.+.+..+... +.+.+....+|+.+.+..+. + .+... .......|+.
T Consensus 210 L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~-~i~~~----------------------------~f~~~~~l~~ 257 (394)
T 4fs7_A 210 LENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-T-ELGKS----------------------------VFYGCTDLES 257 (394)
T ss_dssp CCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-C-EECSS----------------------------TTTTCSSCCE
T ss_pred cceeecCCCceE--eehhhcccCCCceEEECCCc-e-ecccc----------------------------ccccccccee
Confidence 555555444332 12223334455555443221 1 11110 1122345666
Q ss_pred EeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCC
Q 003156 257 LDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSL 336 (843)
Q Consensus 257 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 336 (843)
+.+..+... .....|.....++.+....+.+. ...|..+.+|+.+.+.++ ++......|.++.+|+.+++.++ +
T Consensus 258 ~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 258 ISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp EEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C
T ss_pred EEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-c
Confidence 666655443 55566666677777766665442 245666667777777554 44444556667777777777543 5
Q ss_pred CCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccce
Q 003156 337 TGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLA 400 (843)
Q Consensus 337 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 400 (843)
+.+...+|.+|++|+.+++..| ++..-..+|.++++|+.+++..+ ++ .+...|.+.++|+.
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 5455566777777777777665 55455566777777777777544 32 23345555555554
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=8.9e-17 Score=154.33 Aligned_cols=132 Identities=23% Similarity=0.169 Sum_probs=80.4
Q ss_pred CCCcEEEcCCCccc-CCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEe
Q 003156 276 ANLRYLNLSSNHLR-SRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLS 354 (843)
Q Consensus 276 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 354 (843)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 33444455555666666666666543 5556666666666666666655666666666666666
Q ss_pred cccccccccC-CccccCCCCCCEEEccCCcccccCC---cchhcccccceEeeccccce
Q 003156 355 LSHNHLSGSI-PKSISNLNKLKILKLEFNELSGEIP---QELGKLASLLAVNVSYNRLI 409 (843)
Q Consensus 355 Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~ls~N~l~ 409 (843)
|++|++++.. +..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666666421 1566666777777777777764444 36666777777777777654
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.6e-16 Score=152.52 Aligned_cols=138 Identities=24% Similarity=0.239 Sum_probs=123.7
Q ss_pred cCccCEEeCCCCccc-eeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEE
Q 003156 251 FQTLRILDLSSNNLV-GDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGIL 329 (843)
Q Consensus 251 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 329 (843)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.|++. ..+..+++|++|++++|++++.+|..+..+++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478999999999998 67888899999999999999999876 789999999999999999998788888889999999
Q ss_pred EcCCCCCCCCc-hhhhcccCCCcEEecccccccccCC---ccccCCCCCCEEEccCCcccccCCcc
Q 003156 330 QLDGNSLTGPI-PQVIRNCTSLYLLSLSHNHLSGSIP---KSISNLNKLKILKLEFNELSGEIPQE 391 (843)
Q Consensus 330 ~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p~~ 391 (843)
+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+. .+|.+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99999999643 2789999999999999999996544 48999999999999999998 55543
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=1.4e-16 Score=149.55 Aligned_cols=127 Identities=20% Similarity=0.236 Sum_probs=80.4
Q ss_pred CCCcEEEcCCCccc-CCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEe
Q 003156 276 ANLRYLNLSSNHLR-SRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLS 354 (843)
Q Consensus 276 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 354 (843)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34455555555554 33444445555555555555555533 4566666777777777777765666666677777777
Q ss_pred ccccccccc-CCccccCCCCCCEEEccCCcccccCC---cchhcccccceEeec
Q 003156 355 LSHNHLSGS-IPKSISNLNKLKILKLEFNELSGEIP---QELGKLASLLAVNVS 404 (843)
Q Consensus 355 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~ls 404 (843)
+++|++++. .|..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777777642 23667777777777777777775555 467777777777765
No 385
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.67 E-value=2.6e-15 Score=165.36 Aligned_cols=323 Identities=14% Similarity=0.102 Sum_probs=236.1
Q ss_pred CCccEEecCCCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccC
Q 003156 2 MNMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRL 81 (843)
Q Consensus 2 ~~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L 81 (843)
++|+.+.|.. .++ .|...+|.+|++|+.++|..+ +..+....|.++++|+.+.+..+ +.. +...+|.+...+
T Consensus 71 ~~L~~i~lp~-~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~----i~~~aF~~~~~~ 142 (394)
T 4fs7_A 71 RKVTEIKIPS-TVR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKS----IGVEAFKGCDFK 142 (394)
T ss_dssp TTEEEEECCT-TCC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCE----ECTTTTTTCCCS
T ss_pred CCceEEEeCC-Ccc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eee----ecceeeeccccc
Confidence 5799999975 477 899999999999999999755 88899999999999999988765 332 333466666544
Q ss_pred CEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecC
Q 003156 82 RTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNN 161 (843)
Q Consensus 82 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 161 (843)
...... .+......+|.++.+|+.+.+.++.. .+....|.++.+|+.+++..| ++.+...+|.+...|+.+.+..+
T Consensus 143 ~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 143 EITIPE--GVTVIGDEAFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp EEECCT--TCCEECTTTTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTT
T ss_pred ccccCc--cccccchhhhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCC
Confidence 433332 23335567899999999999987654 477788999999999999887 66677888999999999988877
Q ss_pred cccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCC
Q 003156 162 TLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPG 241 (843)
Q Consensus 162 ~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~ 241 (843)
... +.+.+....+|+.+.+..+. +.+....|.++.+|+.+.+..+... +....+
T Consensus 219 ~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~--i~~~~F--------------------- 272 (394)
T 4fs7_A 219 LYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR--IGGSLF--------------------- 272 (394)
T ss_dssp CCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE--ECSCTT---------------------
T ss_pred ceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce--eecccc---------------------
Confidence 553 33444556789999987654 4366678899999999998776543 222111
Q ss_pred CCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCcccc
Q 003156 242 SSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVC 321 (843)
Q Consensus 242 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 321 (843)
.....++.+.+..+.+ ....|....+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++......|.
T Consensus 273 -------~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 340 (394)
T 4fs7_A 273 -------YNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFR 340 (394)
T ss_dssp -------TTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTT
T ss_pred -------ccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhcc
Confidence 1134455555554432 3345667778888888765 56666677888888888888654 6655567788
Q ss_pred ccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEE
Q 003156 322 ESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKIL 377 (843)
Q Consensus 322 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 377 (843)
++.+|+.+++..| ++.+...+|.+|++|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 341 ~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 341 GCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 8888888888776 66566778889999999998765 33 345678888877764
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=4e-16 Score=153.11 Aligned_cols=128 Identities=24% Similarity=0.332 Sum_probs=84.3
Q ss_pred EEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEeccccc
Q 003156 280 YLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNH 359 (843)
Q Consensus 280 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 359 (843)
.+++++|.++.+ |..+. .+|++|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~~i-p~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKVL-PKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSSC-CSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCcC-CCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 445555555432 22221 35666666666666 555666777777777777777776666667777777777777777
Q ss_pred ccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceec
Q 003156 360 LSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 360 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 411 (843)
|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|++++|++.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 7766666677777777777777777755555677777777777777777643
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=2e-16 Score=148.46 Aligned_cols=129 Identities=19% Similarity=0.202 Sum_probs=116.8
Q ss_pred cCccCEEeCCCCccc-eeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEE
Q 003156 251 FQTLRILDLSSNNLV-GDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGIL 329 (843)
Q Consensus 251 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 329 (843)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 78888999999999999999999876 788999999999999999998788888889999999
Q ss_pred EcCCCCCCCC-chhhhcccCCCcEEecccccccccCC---ccccCCCCCCEEEccC
Q 003156 330 QLDGNSLTGP-IPQVIRNCTSLYLLSLSHNHLSGSIP---KSISNLNKLKILKLEF 381 (843)
Q Consensus 330 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~ 381 (843)
++++|.+++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999964 34889999999999999999996655 5789999999999874
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=6.7e-16 Score=149.56 Aligned_cols=130 Identities=23% Similarity=0.196 Sum_probs=72.6
Q ss_pred cCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCC
Q 003156 254 LRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDG 333 (843)
Q Consensus 254 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 333 (843)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 456667777666 344332 24666666666666655555555556666666666666544444455555555555555
Q ss_pred CCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccc
Q 003156 334 NSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSG 386 (843)
Q Consensus 334 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 386 (843)
|.|++..+..|.++++|+.|+|++|+|++..+..+..+++|++|+|++|.+++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 55555444445555555555555555554333344555555555555555554
No 389
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=149.52 Aligned_cols=127 Identities=20% Similarity=0.159 Sum_probs=66.5
Q ss_pred cEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcCCCCCEEE
Q 003156 30 RYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAALHYLKELL 109 (843)
Q Consensus 30 ~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 109 (843)
+.+++++|++..++...+ ++|++|+|++|+|+..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~---~~l~~L~L~~n~i~~ip-----~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ 84 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP---RDVTELYLDGNQFTLVP-----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLI 84 (193)
T ss_dssp TEEECTTSCCSSCCSCCC---TTCCEEECCSSCCCSCC-----GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CEEEcCCCCCCcCCCCCC---CCCCEEECCCCcCchhH-----HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEE
Confidence 344555555554444322 34555555555554222 1344555555555555555544445555555555555
Q ss_pred cCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCccc
Q 003156 110 LQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLT 164 (843)
Q Consensus 110 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 164 (843)
|++|+|++..+..|..+++|++|+|++|.|+...+..|..+++|+.|+|++|.+.
T Consensus 85 Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 5555555555555555555555555555555444445555555555555555554
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.5e-15 Score=147.14 Aligned_cols=135 Identities=24% Similarity=0.191 Sum_probs=116.4
Q ss_pred CCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecc
Q 003156 277 NLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLS 356 (843)
Q Consensus 277 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 356 (843)
..+.+++++|.++.+ |..+ .++|++|++++|++++..+..+..+++|++|++++|.+++..+..|.++++|+.|+|+
T Consensus 8 ~~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 357899999999864 3333 3689999999999997777778899999999999999997777788999999999999
Q ss_pred cccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccceecCCC
Q 003156 357 HNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRLIGRLPV 414 (843)
Q Consensus 357 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 414 (843)
+|+|++..+..|..+++|++|+|++|+|++..+..+..+++|+.|++++|++++..|.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 9999977777789999999999999999977777788899999999999999988773
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=1.5e-15 Score=146.83 Aligned_cols=134 Identities=17% Similarity=0.146 Sum_probs=97.4
Q ss_pred ccCCCCCcEEEcCCCcccCCCCCCccccc-cceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCC
Q 003156 272 MGLFANLRYLNLSSNHLRSRIPPELGYFH-SLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSL 350 (843)
Q Consensus 272 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 350 (843)
+....+|+.|++++|.++.+ +. +..+. +|++|++++|.+++. ..+..+++|++|+|++|.|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 44556677777777777643 33 33333 777777777777754 567778888888888888885544556788888
Q ss_pred cEEecccccccccCCc--cccCCCCCCEEEccCCcccccCCcc----hhcccccceEeeccccceec
Q 003156 351 YLLSLSHNHLSGSIPK--SISNLNKLKILKLEFNELSGEIPQE----LGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 351 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~l~ls~N~l~~~ 411 (843)
+.|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|.. +..+++|+.||+++|.+...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 88888888886 5665 7788888888888888887 45553 78888888888888876543
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=4.9e-17 Score=160.71 Aligned_cols=151 Identities=21% Similarity=0.256 Sum_probs=121.2
Q ss_pred CccCEEeCCCCccceeCCc------cccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCC
Q 003156 252 QTLRILDLSSNNLVGDIPA------EMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRS 325 (843)
Q Consensus 252 ~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 325 (843)
..++.++++.+.+.+..|. .+..+++|++|++++|.+++ +| .+..+++|++|++++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3445555555555555554 78888999999999999987 45 8888899999999999998 67877888899
Q ss_pred CcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCC-ccccCCCCCCEEEccCCcccccCCcc----------hhc
Q 003156 326 LGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIP-KSISNLNKLKILKLEFNELSGEIPQE----------LGK 394 (843)
Q Consensus 326 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~----------~~~ 394 (843)
|+.|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|++|++++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 9999999999985 55 68899999999999999984332 47889999999999999998776653 788
Q ss_pred ccccceEeeccccce
Q 003156 395 LASLLAVNVSYNRLI 409 (843)
Q Consensus 395 l~~L~~l~ls~N~l~ 409 (843)
+++|+.|| +|.++
T Consensus 173 l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 173 LPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSCSEEC--CGGGT
T ss_pred CCCcEEEC--CcccC
Confidence 99999887 66654
No 393
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.57 E-value=3.4e-13 Score=148.38 Aligned_cols=336 Identities=12% Similarity=0.130 Sum_probs=170.6
Q ss_pred cCChhhhhcCC-CCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccC
Q 003156 17 PVPYQLFENCA-SLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSI 95 (843)
Q Consensus 17 ~~~~~~f~~l~-~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 95 (843)
.|...+|.++. .|+.+.+.. .++.|...+|.++++|+.+.+..|..+.. ..+...+|....+|+.+.+..+ ++.+.
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l-~~Ig~~aF~~c~~L~~i~~~~~-~~~I~ 129 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCV-KKIGRQAFMFCSELTDIPILDS-VTEID 129 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCC-CEECTTTTTTCTTCCBCGGGTT-CSEEC
T ss_pred EcCHhhccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCee-eEechhhchhcccceeeccCCc-cceeh
Confidence 45555666553 466666643 35556666666666666666655432111 1123334555555555555433 33344
Q ss_pred chhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccccCCCCccCCC
Q 003156 96 PQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTGDIPHWIGNIS 175 (843)
Q Consensus 96 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 175 (843)
...|.+..+|+.+.+..+. ..+....|..+.+|+.+.+.++ ++ .+...+|.+ .
T Consensus 130 ~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~------------------------~I~~~aF~~-~ 182 (394)
T 4gt6_A 130 SEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VT------------------------AIEERAFTG-T 182 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CC------------------------EECTTTTTT-C
T ss_pred hhhhhhhccccccccccee-eeecccceecccccccccccce-ee------------------------Eeccccccc-c
Confidence 4445555555555554332 2233444445555555554433 22 233334433 3
Q ss_pred CccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhcc-CcceeeccCCcceecCCCCCCCCCcccccCcc
Q 003156 176 TLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDL-GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTL 254 (843)
Q Consensus 176 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L 254 (843)
+|+.+.+..+... ....+|.++.+|+......+... .+...++.. ...... +. ..+ ....+
T Consensus 183 ~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~-~~~----------~~~~~ 244 (394)
T 4gt6_A 183 ALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYP-AIDNVLYEKSANGDYA-----LI-RYP----------SQRED 244 (394)
T ss_dssp CCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSC-BSSSCEEEECTTSCEE-----EE-ECC----------TTCCC
T ss_pred ceeEEEECCcccc-cccchhhhccccceecccccccc-cccceeeccccccccc-----cc-ccc----------ccccc
Confidence 4555555544332 44455666666666655544433 122211111 000000 00 000 01223
Q ss_pred CEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCC
Q 003156 255 RILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGN 334 (843)
Q Consensus 255 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 334 (843)
..+.+. +.++......|....+|+.+.+.++.. .+...+|.++..|+.+.+. +.++......|.++.+|+.++|..+
T Consensus 245 ~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~ 321 (394)
T 4gt6_A 245 PAFKIP-NGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG 321 (394)
T ss_dssp SEEECC-TTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ceEEcC-CcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc
Confidence 344443 233435556677777777777766543 3555677777777777775 4455455566777777777777654
Q ss_pred CCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhcccccceEeeccccc
Q 003156 335 SLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASLLAVNVSYNRL 408 (843)
Q Consensus 335 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l 408 (843)
++.+...+|.+|++|+.+.+..+ ++..-..+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 322 -v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 322 -ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp -CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred -ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 55455667777888888877654 554556677778888888877776542 3445556677766665543
No 394
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=1.2e-15 Score=162.95 Aligned_cols=138 Identities=13% Similarity=0.111 Sum_probs=97.1
Q ss_pred hhhhcCeeccccceEEEEEEECCCCeEEEEEEeecCCcc-------------cChHHH--------HHHHHHHHhccCCC
Q 003156 555 LLEKAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDII-------------QYPEDF--------EREVRVLGKARHPN 613 (843)
Q Consensus 555 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~--------~~E~~~l~~l~h~n 613 (843)
.|++...||+|+||.||+|... +|+.||||.++..... ...... .+|...+.++.+.+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3667788999999999999986 7999999987432110 001111 34566666665444
Q ss_pred ccceeeEEEcCCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEc
Q 003156 614 LISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLD 693 (843)
Q Consensus 614 iv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 693 (843)
+.-..-+... ..++||||+++++|..+.. ......++.|++.+|.|||.. +||||||||.|||++
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~----------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSS----------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCC----------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhcc----------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 3222212121 2379999999988754321 123467889999999999998 999999999999998
Q ss_pred CCCC----------cEEeeccCccc
Q 003156 694 DNYN----------PRISDFGLARL 708 (843)
Q Consensus 694 ~~~~----------~kl~Dfgl~~~ 708 (843)
+++. +.|+||+-+-.
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCCcccccccccceEEEEeCCccc
Confidence 7763 88999997643
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=5.1e-15 Score=143.13 Aligned_cols=132 Identities=19% Similarity=0.165 Sum_probs=112.2
Q ss_pred ccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEE
Q 003156 250 LFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGIL 329 (843)
Q Consensus 250 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 329 (843)
...+|+.|++++|+++ .+|......++|++|++++|.|++. ..|..+++|++|+|++|+|++..+..+..+++|+.|
T Consensus 17 ~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp CTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 4578999999999998 4555333344999999999999876 688899999999999999996655556899999999
Q ss_pred EcCCCCCCCCchh--hhcccCCCcEEecccccccccCCcc----ccCCCCCCEEEccCCcccc
Q 003156 330 QLDGNSLTGPIPQ--VIRNCTSLYLLSLSHNHLSGSIPKS----ISNLNKLKILKLEFNELSG 386 (843)
Q Consensus 330 ~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~ 386 (843)
+|++|.|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+++|.+..
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999997 5665 8999999999999999998 56764 8999999999999999873
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=2.4e-14 Score=137.31 Aligned_cols=107 Identities=24% Similarity=0.238 Sum_probs=54.2
Q ss_pred eEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCC
Q 003156 303 IHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFN 382 (843)
Q Consensus 303 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 382 (843)
+.+++++|+++ .+|..+ .++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 34444444444 233333 144555555555555444555555555555555555555444444455555555555555
Q ss_pred cccccCCcchhcccccceEeeccccceecC
Q 003156 383 ELSGEIPQELGKLASLLAVNVSYNRLIGRL 412 (843)
Q Consensus 383 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 412 (843)
+|++..+..|..+++|+.|+|++|++++..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 555444444555555555555555554443
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=5.9e-16 Score=152.90 Aligned_cols=157 Identities=21% Similarity=0.227 Sum_probs=127.6
Q ss_pred CcceeeccCCcceecCCCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccc
Q 003156 223 GLEEIDLSENGFMGSIPPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSL 302 (843)
Q Consensus 223 ~L~~L~l~~n~l~~~~p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 302 (843)
.++.++++.+.+.|.+|.-......+..+++|++|+|++|++++ +| .+..+++|++|++++|.|+. +|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhcCCcC
Confidence 45666666666666555422222234567899999999999996 67 88999999999999999984 67777788999
Q ss_pred eEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCch-hhhcccCCCcEEecccccccccCCcc----------ccCC
Q 003156 303 IHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIP-QVIRNCTSLYLLSLSHNHLSGSIPKS----------ISNL 371 (843)
Q Consensus 303 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------~~~l 371 (843)
++|++++|++++ +| .+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+++.+|.. +..+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999996 45 68899999999999999995433 57899999999999999999776653 8899
Q ss_pred CCCCEEEccCCcccc
Q 003156 372 NKLKILKLEFNELSG 386 (843)
Q Consensus 372 ~~L~~L~L~~N~l~~ 386 (843)
++|+.|| +|.++.
T Consensus 174 ~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 174 PNLKKLD--GMPVDV 186 (198)
T ss_dssp SSCSEEC--CGGGTT
T ss_pred CCcEEEC--CcccCH
Confidence 9999987 787764
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=6.7e-14 Score=134.59 Aligned_cols=104 Identities=26% Similarity=0.236 Sum_probs=56.0
Q ss_pred cEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccc
Q 003156 279 RYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHN 358 (843)
Q Consensus 279 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 358 (843)
+.+++++|.++. +|..+. .+|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 456666666643 333332 45555555555555555555555555555555555555444444555555555555555
Q ss_pred cccccCCccccCCCCCCEEEccCCccc
Q 003156 359 HLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 359 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555433334555555555555555555
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.49 E-value=2.3e-12 Score=141.81 Aligned_cols=324 Identities=12% Similarity=0.139 Sum_probs=208.5
Q ss_pred CccEEecCCCcCcccCChhhhhcCCCCcEEEccCcc---ccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCc
Q 003156 3 NMKFLDLSNNLLSGPVPYQLFENCASLRYLSLAGNI---LQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLK 79 (843)
Q Consensus 3 ~l~~L~L~~n~i~~~~~~~~f~~l~~L~~L~L~~n~---i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~ 79 (843)
.|+.+.+-.+ ++ .|...+|.+|++|+.+.++.|. ++.|...+|.++.+|+.+.+.++ +.. +...+|....
T Consensus 65 ~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~----I~~~aF~~c~ 137 (394)
T 4gt6_A 65 VLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE----IDSEAFHHCE 137 (394)
T ss_dssp CCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE----ECTTTTTTCT
T ss_pred cCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce----ehhhhhhhhc
Confidence 3777888654 67 7999999999999999998874 78899999999999999988775 332 4445788999
Q ss_pred cCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEee
Q 003156 80 RLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVS 159 (843)
Q Consensus 80 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 159 (843)
+|+.+.+..+ +..+....|....+|+.+.+..+ ++.+....|.+ .+|+.+.+..+-.. ....+|....++......
T Consensus 138 ~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~ 213 (394)
T 4gt6_A 138 ELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSD 213 (394)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEEC
T ss_pred ccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceeccc
Confidence 9999999765 44477788999999999999876 44455666654 67999988776433 556667777777766665
Q ss_pred cCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCC
Q 003156 160 NNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIP 239 (843)
Q Consensus 160 ~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p 239 (843)
.+... .....+..........+ ..+.....+..+.+ |..+. .+.
T Consensus 214 ~~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~i---------p~~v~----------------~i~ 257 (394)
T 4gt6_A 214 SESYP-AIDNVLYEKSANGDYAL----------IRYPSQREDPAFKI---------PNGVA----------------RIE 257 (394)
T ss_dssp CSSSC-BSSSCEEEECTTSCEEE----------EECCTTCCCSEEEC---------CTTEE----------------EEC
T ss_pred ccccc-cccceeecccccccccc----------cccccccccceEEc---------CCcce----------------Ecc
Confidence 55443 11111111000000000 00111112222221 11100 000
Q ss_pred CCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCcc
Q 003156 240 PGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQE 319 (843)
Q Consensus 240 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 319 (843)
.. .+.....|+.+.+.++... .....|.+..+|+.+.+. +.++.+...+|.++.+|+.++|.++ ++......
T Consensus 258 ~~-----aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 329 (394)
T 4gt6_A 258 TH-----AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDA 329 (394)
T ss_dssp TT-----TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred cc-----eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhH
Confidence 00 1122455666776655443 566677777888888886 4455666678888888888888764 65555678
Q ss_pred ccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCccc
Q 003156 320 VCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 320 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
|.++.+|+.+.+..+ ++.+-..+|.+|++|+.+++.+|.... ..+.....|+.+.+..|.+.
T Consensus 330 F~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 330 FAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred hhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 888899999998655 665667789999999999999887542 46777888888888777653
No 400
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=3.1e-13 Score=129.48 Aligned_cols=107 Identities=26% Similarity=0.208 Sum_probs=78.5
Q ss_pred cEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccc
Q 003156 279 RYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHN 358 (843)
Q Consensus 279 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 358 (843)
+.|++++|.++. +|..+ ..+|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455555555554 33333 256677777777777666777778888888888888888777777788888888888888
Q ss_pred cccccCCccccCCCCCCEEEccCCcccccC
Q 003156 359 HLSGSIPKSISNLNKLKILKLEFNELSGEI 388 (843)
Q Consensus 359 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 388 (843)
+|++..+..|..+++|++|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 888666667888888888888888887543
No 401
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=3.8e-13 Score=129.28 Aligned_cols=108 Identities=22% Similarity=0.201 Sum_probs=68.5
Q ss_pred eEEEccCCcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCC
Q 003156 303 IHLDLRNNALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFN 382 (843)
Q Consensus 303 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 382 (843)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56666666665 4555443 56666666666666666666666666666666666666544445566666666666666
Q ss_pred cccccCCcchhcccccceEeeccccceecCC
Q 003156 383 ELSGEIPQELGKLASLLAVNVSYNRLIGRLP 413 (843)
Q Consensus 383 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 413 (843)
+|++..+..|..+++|+.|+|++|++....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 6665545556666666666666666664433
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=5.9e-14 Score=152.25 Aligned_cols=161 Identities=21% Similarity=0.249 Sum_probs=120.0
Q ss_pred cCccCEEeCCCCccceeCCccccCC-----CCCcEEEcCCCcccCCCCCCc-cccccceEEEccCCcccccCCcccc---
Q 003156 251 FQTLRILDLSSNNLVGDIPAEMGLF-----ANLRYLNLSSNHLRSRIPPEL-GYFHSLIHLDLRNNALYGSIPQEVC--- 321 (843)
Q Consensus 251 l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~--- 321 (843)
+++|+.|+|++|.++......+... ++|++|+|++|.|+......+ ..+.+|++|+|++|.|+......++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4678889999988875444443332 689999999998864322222 3466899999999999754444442
Q ss_pred --ccCCCcEEEcCCCCCCCC----chhhhcccCCCcEEeccccccccc----CCccccCCCCCCEEEccCCccccc----
Q 003156 322 --ESRSLGILQLDGNSLTGP----IPQVIRNCTSLYLLSLSHNHLSGS----IPKSISNLNKLKILKLEFNELSGE---- 387 (843)
Q Consensus 322 --~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~---- 387 (843)
..++|+.|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++..+...++|+.|+|++|.|++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 457899999999999753 444557789999999999999753 356677888999999999999853
Q ss_pred CCcchhcccccceEeeccccceec
Q 003156 388 IPQELGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 388 ~p~~~~~l~~L~~l~ls~N~l~~~ 411 (843)
++..+...++|+.|||++|.++..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHH
Confidence 344556678999999999998644
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=2.4e-14 Score=155.35 Aligned_cols=183 Identities=18% Similarity=0.144 Sum_probs=101.1
Q ss_pred CCCcEEEccCccccccccccccC-----CCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhh--
Q 003156 27 ASLRYLSLAGNILQGPIGKIFNY-----CSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGV-- 99 (843)
Q Consensus 27 ~~L~~L~L~~n~i~~~~~~~f~~-----l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-- 99 (843)
+.|++|+|++|.|.......|.. .++|++|+|++|.|+..... .....+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~---~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~ 148 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLR---TLLPVFLRARKLGLQLNSLGPEACKDLRD 148 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHH---HTHHHHHTEEEEECCSSCCCHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHH---HHHHHHHhccHhhcCCCCCCHHHHHHHHH
Confidence 45667777777665433333222 25677777777766532110 112235567777777777764333333
Q ss_pred ---hcCCCCCEEEcCCCccccc----CCCCCCCCCCCcEEEccCCcccccC----CchhhcccCCcEEEeecCccccc--
Q 003156 100 ---AALHYLKELLLQGNQFSGP----LPADIGFCPHLTTLDLSNNLFTGQL----PVSLRLLNSMIFISVSNNTLTGD-- 166 (843)
Q Consensus 100 ---~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~-- 166 (843)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+... +..+...++|+.|+|++|.|+..
T Consensus 149 ~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~ 228 (372)
T 3un9_A 149 LLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAA 228 (372)
T ss_dssp HHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHH
T ss_pred HHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHH
Confidence 2346677777777776532 2233345667777777777776432 34455666777777777777642
Q ss_pred --CCCCccCCCCccEEEcccCCcCCCCCCCCCCC---C--CCcEEE--ecCCcCC
Q 003156 167 --IPHWIGNISTLEFLDFSNNHLTGSLPSSLFNC---K--KLSVIR--LRGNSLN 212 (843)
Q Consensus 167 --~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l---~--~L~~L~--L~~N~l~ 212 (843)
+...+...++|++|+|++|.|++.....+..+ . .|+.+. +..|.+.
T Consensus 229 ~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 229 LALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 23344456778888888888775333333222 1 166666 5566554
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=4.1e-12 Score=137.31 Aligned_cols=103 Identities=24% Similarity=0.171 Sum_probs=65.5
Q ss_pred EEEcCCC-cccCCCCCCccccccceEEEccC-CcccccCCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEeccc
Q 003156 280 YLNLSSN-HLRSRIPPELGYFHSLIHLDLRN-NALYGSIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSH 357 (843)
Q Consensus 280 ~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 357 (843)
.++++++ .|++ +|. +..+++|++|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 6664 444 66666667777764 666655556666666666666666666666666666666666666666
Q ss_pred ccccccCCccccCCCCCCEEEccCCccc
Q 003156 358 NHLSGSIPKSISNLNKLKILKLEFNELS 385 (843)
Q Consensus 358 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 385 (843)
|+|++..+..|..++ |+.|+|.+|.|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 666644444444444 666666666665
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=7.7e-12 Score=135.13 Aligned_cols=105 Identities=22% Similarity=0.187 Sum_probs=65.5
Q ss_pred EEEccCC-cccccCCccccccCCCcEEEcCC-CCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccC
Q 003156 304 HLDLRNN-ALYGSIPQEVCESRSLGILQLDG-NSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEF 381 (843)
Q Consensus 304 ~L~L~~n-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 381 (843)
.++++++ +|+ .+|. +..+++|+.|+|++ |.|++..+..|.++++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3466665 666 3555 66666666666664 666655556666666666666666666666666666666666666666
Q ss_pred CcccccCCcchhcccccceEeeccccceec
Q 003156 382 NELSGEIPQELGKLASLLAVNVSYNRLIGR 411 (843)
Q Consensus 382 N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 411 (843)
|+|++..+..+..++ |+.|+|++|+|...
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 666654444555444 66666666666543
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.27 E-value=4.1e-10 Score=123.09 Aligned_cols=302 Identities=12% Similarity=0.064 Sum_probs=165.0
Q ss_pred hhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCcccCchhhhcC
Q 003156 23 FENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGSIPQGVAAL 102 (843)
Q Consensus 23 f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 102 (843)
|....+|+++.+. ..++.|...+|.++.+|++++|..+ ++. +...+|.+. +|+.+.+..+ +..+...+|..
T Consensus 42 ~~~~~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~----Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~- 112 (379)
T 4h09_A 42 YKDRDRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTS----IGDGAFADT-KLQSYTGMER-VKKFGDYVFQG- 112 (379)
T ss_dssp GGGGGGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCE----ECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-
T ss_pred cccccCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceE----echhhhcCC-CCceEECCce-eeEeccceecc-
Confidence 5566677777774 3566777777777777777777654 443 333456554 5666666543 44444455554
Q ss_pred CCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEeecCcccc------------cCCCC
Q 003156 103 HYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISVSNNTLTG------------DIPHW 170 (843)
Q Consensus 103 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------~~p~~ 170 (843)
.+|+.+.+..+. .......|.+. +|+.+.+..+ ++.+....|.....++.+.+..+.... .....
T Consensus 113 ~~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (379)
T 4h09_A 113 TDLDDFEFPGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILES 189 (379)
T ss_dssp CCCSEEECCTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEE
T ss_pred CCcccccCCCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecc
Confidence 367777776553 22444444443 5666655543 344555666666777766665543221 11223
Q ss_pred ccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecCCCCCCCCCcccc
Q 003156 171 IGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSIPPGSSSSSSSTL 250 (843)
Q Consensus 171 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~~ 250 (843)
+.....+..+.+..+... .....+..+.+|+.+.+..+ +. .+....+ ..
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~-~i~~~~f----------------------------~~ 238 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VT-TLGDGAF----------------------------YG 238 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CC-EECTTTT----------------------------TT
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccc-ee-EEccccc----------------------------cC
Confidence 445566677666554433 55667777888888876544 22 1111111 11
Q ss_pred cCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCccccccCCCcEEE
Q 003156 251 FQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVCESRSLGILQ 330 (843)
Q Consensus 251 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 330 (843)
...|+.+.+..+ ++......|....+|+.+.+..+ ++.+....|.++.+|+.+.+.++.++......|.++.+|+.+.
T Consensus 239 ~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~ 316 (379)
T 4h09_A 239 MKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVT 316 (379)
T ss_dssp CSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEE
T ss_pred CccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEE
Confidence 344555555544 44344555666666666666543 4444445566666666666665555544445555666666666
Q ss_pred cCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCC
Q 003156 331 LDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNL 371 (843)
Q Consensus 331 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 371 (843)
|..+ ++.+-..+|.+|++|+.+.+..+ ++..-..+|.++
T Consensus 317 lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 317 LPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred cCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 6433 44344455666666666655443 332334444443
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.15 E-value=3.8e-09 Score=115.38 Aligned_cols=297 Identities=10% Similarity=0.029 Sum_probs=153.4
Q ss_pred ccCCEEecCCccCcccCchhhhcCCCCCEEEcCCCcccccCCCCCCCCCCCcEEEccCCcccccCCchhhcccCCcEEEe
Q 003156 79 KRLRTLDLSHNLFSGSIPQGVAALHYLKELLLQGNQFSGPLPADIGFCPHLTTLDLSNNLFTGQLPVSLRLLNSMIFISV 158 (843)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 158 (843)
.+|+.+.+.. .++.+...+|.++.+|+.+.|..+ ++.+...+|.++ +|+.+.+..+ ++.+...+|.. .+|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 3444444432 233334444555555555555432 333444444444 3444444432 33333344433 24555555
Q ss_pred ecCcccccCCCCccCCCCccEEEcccCCcCCCCCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCcceecC
Q 003156 159 SNNTLTGDIPHWIGNISTLEFLDFSNNHLTGSLPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENGFMGSI 238 (843)
Q Consensus 159 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~l~~~~ 238 (843)
..+- ......+|.+. +|+.+.+..+ ++.+....|..+.+++.+.+..+.................. ....
T Consensus 121 p~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 190 (379)
T 4h09_A 121 PGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTI-------LESY 190 (379)
T ss_dssp CTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSE-------EEEC
T ss_pred CCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccce-------eccc
Confidence 4432 22333444443 4555555433 33345556667777777766655433111110000000000 0000
Q ss_pred CCCCCCCCcccccCccCEEeCCCCccceeCCccccCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCc
Q 003156 239 PPGSSSSSSSTLFQTLRILDLSSNNLVGDIPAEMGLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQ 318 (843)
Q Consensus 239 p~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 318 (843)
+ ....+..+.+..+.-. .....+....+|+.+.+..+ +..+....|..+..|+.+.+..+ ++.....
T Consensus 191 ~----------~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~ 257 (379)
T 4h09_A 191 P----------AAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF 257 (379)
T ss_dssp C----------TTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT
T ss_pred c----------ccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcc
Confidence 0 1123344444333222 44455556666777776554 33445566667777777777655 4445556
Q ss_pred cccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcccccCCcchhccccc
Q 003156 319 EVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNELSGEIPQELGKLASL 398 (843)
Q Consensus 319 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 398 (843)
.|.++.+|+.+.+..+ ++......|.+|++|+.+.+.++.++.....+|.++.+|+.+.|..+ ++..-..+|.++.+|
T Consensus 258 aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 335 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKAL 335 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCC
Confidence 6677777777777544 44345566777777777777777777555667777777777777644 554556677777777
Q ss_pred ceEeecc
Q 003156 399 LAVNVSY 405 (843)
Q Consensus 399 ~~l~ls~ 405 (843)
+.+.+..
T Consensus 336 ~~i~ip~ 342 (379)
T 4h09_A 336 STISYPK 342 (379)
T ss_dssp CCCCCCT
T ss_pred CEEEECC
Confidence 7776643
No 408
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.12 E-value=1.8e-10 Score=118.99 Aligned_cols=138 Identities=17% Similarity=0.041 Sum_probs=107.1
Q ss_pred hcCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CCCccceeeEEEcCCeeEEEEEeCCC
Q 003156 558 KAAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HPNLISLEGYYWTPQLKLLVSDYAPN 636 (843)
Q Consensus 558 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~ 636 (843)
....++.|+.+.||++.. .++.+++|....... .....+.+|+.+++.+. +..+.++++++...+..++||||++|
T Consensus 18 ~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp EEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred eEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 344577788899999975 468899999864221 22346889999999984 67788999999888889999999999
Q ss_pred CCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhc-----------------------------------------
Q 003156 637 GSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHS----------------------------------------- 675 (843)
Q Consensus 637 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------------------------------------- 675 (843)
.++.+.+. +......++.+++++++.||+.
T Consensus 95 ~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T 3tm0_A 95 VLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp EEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred eehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence 99877632 1123457888999999999981
Q ss_pred ---------------CCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 676 ---------------FRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 676 ---------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
..+.++|+|+++.||+++++..+.|.||+.+.
T Consensus 166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01358999999999999876667799999875
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.98 E-value=1.1e-09 Score=112.82 Aligned_cols=130 Identities=15% Similarity=0.081 Sum_probs=96.5
Q ss_pred eec-cccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCC--ccceeeEEEcCCeeEEEEEeCCCC
Q 003156 561 EVG-EGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPN--LISLEGYYWTPQLKLLVSDYAPNG 637 (843)
Q Consensus 561 ~ig-~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~lV~e~~~~g 637 (843)
.++ .|..+.||++... +|+.+++|..... ....+.+|+.+++.+.+.+ +.+++++...++..++||||++|.
T Consensus 26 ~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~ 100 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ 100 (264)
T ss_dssp ECSCTTSSCEEEEEECT-TSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred ecccCCCCceEEEEecC-CCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCc
Confidence 344 5556999999764 6778999986443 2245788999999996544 456888888777889999999998
Q ss_pred CHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcC-----------------------------------------
Q 003156 638 SLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSF----------------------------------------- 676 (843)
Q Consensus 638 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 676 (843)
++. ... . ....++.++++.++.||...
T Consensus 101 ~l~--~~~-------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 101 DLL--SSH-------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp ETT--TSC-------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred ccC--cCc-------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 873 111 1 12356777888888888641
Q ss_pred --------------CCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 677 --------------RPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 677 --------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
.+.++|+|++|.||++++++.+.|.|||.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999887767899999875
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=1.1e-09 Score=118.57 Aligned_cols=143 Identities=15% Similarity=0.208 Sum_probs=105.4
Q ss_pred CeeccccceEEEEEEECCCCeEEEEEEee--cCCcccChHHHHHHHHHHHhcc--CCCccceeeEEEcC---CeeEEEEE
Q 003156 560 AEVGEGVFGTVYKVSFGTQGRMLAVKKLV--TSDIIQYPEDFEREVRVLGKAR--HPNLISLEGYYWTP---QLKLLVSD 632 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~---~~~~lV~e 632 (843)
+.++.|.++.||++... +..+++|+.. ..........+.+|+.+++.+. +..+.++++++.+. +..++|||
T Consensus 44 ~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 36899999999998874 5678888775 3322222356788999999997 45678889888766 34789999
Q ss_pred eCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcC------------------------------------
Q 003156 633 YAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSF------------------------------------ 676 (843)
Q Consensus 633 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 676 (843)
|++|..+.+. ....++..++..++.++++.|+.||...
T Consensus 122 ~v~G~~l~~~------~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQ------SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCT------TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCC------ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9998776431 1223677888899999999999999721
Q ss_pred -------------------CCCeeecCCCCCCEEEcCCCC--cEEeeccCccccc
Q 003156 677 -------------------RPPIIHYNLKPSNILLDDNYN--PRISDFGLARLLT 710 (843)
Q Consensus 677 -------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfgl~~~~~ 710 (843)
.+.++|+|+++.||+++.++. +.|.||+.+..-.
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 247999999999999997653 6899999987543
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=1.4e-09 Score=116.69 Aligned_cols=60 Identities=27% Similarity=0.305 Sum_probs=30.4
Q ss_pred CCCccEEEcccCCcCCC----CCCCCCCCCCCcEEEecCCcCCCCCCchhhccCcceeeccCCc
Q 003156 174 ISTLEFLDFSNNHLTGS----LPSSLFNCKKLSVIRLRGNSLNGNIPEGLFDLGLEEIDLSENG 233 (843)
Q Consensus 174 l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~L~l~~n~ 233 (843)
+++|++|+|+.|.+++. ++..+.++++|+.|+|++|.|+...-..+...-...+++++++
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 45666666666666542 2233344566666676666665322222222112345666655
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=1.6e-09 Score=114.46 Aligned_cols=185 Identities=18% Similarity=0.144 Sum_probs=119.6
Q ss_pred eeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CCC--ccceeeEEEcCC---eeEEEEEeC
Q 003156 561 EVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HPN--LISLEGYYWTPQ---LKLLVSDYA 634 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~g~~~~~~---~~~lV~e~~ 634 (843)
.++.|.+..||++. ..+++|..... .....+.+|+++++.+. +.. +.++++.....+ ..|+|||++
T Consensus 27 ~~~~G~~n~v~~v~-----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 27 ISGEGNDCIAYEIN-----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp EEEECSSEEEEEST-----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred ecCCCCcceEEEEC-----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 58999999999863 45888875322 23467889999999884 332 334444433332 347899999
Q ss_pred CCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhc---------------------------------------
Q 003156 635 PNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHS--------------------------------------- 675 (843)
Q Consensus 635 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------------------------------------- 675 (843)
+|.++.+.... .++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99888654332 256667777888888888888851
Q ss_pred ----------------CCCCeeecCCCCCCEEEcC--CCCcEEeeccCcccccccccceecccc---cc---------cc
Q 003156 676 ----------------FRPPIIHYNLKPSNILLDD--NYNPRISDFGLARLLTRLDKHVMSNRF---QS---------AL 725 (843)
Q Consensus 676 ----------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgl~~~~~~~~~~~~~~~~---~g---------~~ 725 (843)
..+.++|+|+++.||++++ +..+.|.||+.+..-.+..+....... .+ ..
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1246899999999999997 566889999998654332111000000 00 00
Q ss_pred ccCC-cccccCcCCCCCchhHHHHHHHHHHHHhCCCCC
Q 003156 726 GYVA-PELTCQSLRVNEKCDIYGFGVLILELVTGRRPV 762 (843)
Q Consensus 726 ~y~a-PE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~ 762 (843)
++.. |+.. .......+.|++|.++|.+.+|..+|
T Consensus 253 ~~~~~~~~~---~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVL---EKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHH---HHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHH---HHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1122 2221 01123468999999999999998776
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.75 E-value=3.2e-09 Score=113.95 Aligned_cols=134 Identities=17% Similarity=0.188 Sum_probs=60.7
Q ss_pred cCCCCCcEEEcCCCcccCCCCCCccccccceEEEccCCcccccCCcccc--ccCCCcEEEcCC--CCCCCC-----chhh
Q 003156 273 GLFANLRYLNLSSNHLRSRIPPELGYFHSLIHLDLRNNALYGSIPQEVC--ESRSLGILQLDG--NSLTGP-----IPQV 343 (843)
Q Consensus 273 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~ 343 (843)
..+++|+.|++++|.-.. .+. +. +++|+.|+|..|.+.......++ .+++|+.|+|+. |...+. +...
T Consensus 169 ~~~P~L~~L~L~g~~~l~-l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~ 245 (362)
T 2ra8_A 169 DAMPLLNNLKIKGTNNLS-IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL 245 (362)
T ss_dssp HTCTTCCEEEEECCBTCB-CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGG
T ss_pred hcCCCCcEEEEeCCCCce-ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHH
Confidence 444555555555542111 111 22 45555555555555432222222 455555555532 111110 0011
Q ss_pred h--cccCCCcEEecccccccccCCcccc---CCCCCCEEEccCCccccc----CCcchhcccccceEeeccccce
Q 003156 344 I--RNCTSLYLLSLSHNHLSGSIPKSIS---NLNKLKILKLEFNELSGE----IPQELGKLASLLAVNVSYNRLI 409 (843)
Q Consensus 344 ~--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~ 409 (843)
+ ..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.++
T Consensus 246 l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 246 FSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp SCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 1 1345666666666655533322222 355666666666666542 2333345556666666666544
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.58 E-value=5.3e-09 Score=101.28 Aligned_cols=119 Identities=14% Similarity=0.112 Sum_probs=58.1
Q ss_pred cccCCCCCCEEECCCC-CCccccCCCcCccccCCccCCEEecCCccCccc----CchhhhcCCCCCEEEcCCCccccc--
Q 003156 46 IFNYCSSLNTLNLSNN-HFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGS----IPQGVAALHYLKELLLQGNQFSGP-- 118 (843)
Q Consensus 46 ~f~~l~~L~~L~Ls~N-~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~-- 118 (843)
.+...+.|++|+|++| .|...........+...++|++|+|++|.|... +...+...++|++|+|++|.|.+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3444555555555555 544211111112233344555555555555421 223344445566666666665532
Q ss_pred --CCCCCCCCCCCcEEEc--cCCcccccC----CchhhcccCCcEEEeecCccc
Q 003156 119 --LPADIGFCPHLTTLDL--SNNLFTGQL----PVSLRLLNSMIFISVSNNTLT 164 (843)
Q Consensus 119 --~~~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 164 (843)
+...+...++|++|+| ++|.|+... ...+...++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334445556666666 556665322 233444466666666666654
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=1.6e-08 Score=102.78 Aligned_cols=80 Identities=24% Similarity=0.341 Sum_probs=57.0
Q ss_pred cccCCCcEEEcCCCCCCC--CchhhhcccCCCcEEecccccccccCCccccCCC--CCCEEEccCCcccccCCc------
Q 003156 321 CESRSLGILQLDGNSLTG--PIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLN--KLKILKLEFNELSGEIPQ------ 390 (843)
Q Consensus 321 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~------ 390 (843)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 456788888888888876 3456677888888888888888754 3344444 888888888888876652
Q ss_pred -chhcccccceEe
Q 003156 391 -ELGKLASLLAVN 402 (843)
Q Consensus 391 -~~~~l~~L~~l~ 402 (843)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 356777777665
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.55 E-value=8.8e-09 Score=99.67 Aligned_cols=120 Identities=14% Similarity=0.172 Sum_probs=79.9
Q ss_pred hhhhcCCCCcEEEccCc-ccccc----ccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCccc-
Q 003156 21 QLFENCASLRYLSLAGN-ILQGP----IGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGS- 94 (843)
Q Consensus 21 ~~f~~l~~L~~L~L~~n-~i~~~----~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~- 94 (843)
.++...+.|++|+|++| .|... ....+...++|++|+|++|.|...........+...++|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34566788888888888 77542 2334566778888888888876432211223344557788888888888743
Q ss_pred ---CchhhhcCCCCCEEEc--CCCccccc----CCCCCCCCCCCcEEEccCCccc
Q 003156 95 ---IPQGVAALHYLKELLL--QGNQFSGP----LPADIGFCPHLTTLDLSNNLFT 140 (843)
Q Consensus 95 ---~~~~~~~l~~L~~L~L--~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 140 (843)
+...+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3455666778888888 77887643 2334445678888888888776
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.40 E-value=7.1e-07 Score=94.60 Aligned_cols=134 Identities=14% Similarity=0.119 Sum_probs=95.8
Q ss_pred cCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccC----CCccceeeEEEcCCeeEEEEEeC
Q 003156 559 AAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARH----PNLISLEGYYWTPQLKLLVSDYA 634 (843)
Q Consensus 559 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~~~~~~~~lV~e~~ 634 (843)
.+.++.|....||++ |..+++|..... .....+.+|..+++.+.+ ..+.+++++ +..++||||+
T Consensus 42 v~~l~~G~~n~vy~v-----g~~~vlR~~~~~---~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i 109 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC-----NEQYVVKVPKRD---SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYI 109 (320)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESSH---HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECC
T ss_pred EEeCCCCCCceEEEE-----CCEEEEEeCCcH---HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeec
Confidence 346899999999997 556888875322 123568899999998865 123444444 4568999999
Q ss_pred CCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcC--------------------------------------
Q 003156 635 PNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSF-------------------------------------- 676 (843)
Q Consensus 635 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------- 676 (843)
+|.++...... .++..++..++.++++.++.||+..
T Consensus 110 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 110 KGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred CCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 99988643321 2455566677777777777777431
Q ss_pred ----------------------CCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 677 ----------------------RPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 677 ----------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
.+.++|+|+++.||+++.+..+.|.||+.+....
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1245999999999999987667999999986544
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=3.5e-08 Score=100.20 Aligned_cols=79 Identities=29% Similarity=0.368 Sum_probs=48.3
Q ss_pred ccccceEEEccCCcccc--cCCccccccCCCcEEEcCCCCCCCCchhhhcccC--CCcEEecccccccccCCc-------
Q 003156 298 YFHSLIHLDLRNNALYG--SIPQEVCESRSLGILQLDGNSLTGPIPQVIRNCT--SLYLLSLSHNHLSGSIPK------- 366 (843)
Q Consensus 298 ~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------- 366 (843)
.+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34556666666666654 3345555667777777777777643 2344444 777777777777765552
Q ss_pred cccCCCCCCEEE
Q 003156 367 SISNLNKLKILK 378 (843)
Q Consensus 367 ~~~~l~~L~~L~ 378 (843)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 356677777765
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.35 E-value=3.3e-06 Score=87.14 Aligned_cols=136 Identities=19% Similarity=0.162 Sum_probs=97.9
Q ss_pred eeccccce-EEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CCCccceeeEEEcCCeeEEEEEeCCCCC
Q 003156 561 EVGEGVFG-TVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HPNLISLEGYYWTPQLKLLVSDYAPNGS 638 (843)
Q Consensus 561 ~ig~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~gs 638 (843)
.+..|..| .||+.....++..+++|+-... ....+.+|...++.+. +--+.++++++.+++..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 34556555 6999887767788999986432 2456888999998884 3346778899998899999999999988
Q ss_pred HHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcC------------------------------------------
Q 003156 639 LQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSF------------------------------------------ 676 (843)
Q Consensus 639 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------ 676 (843)
+.+..... ......++.+++..++.||..-
T Consensus 107 ~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 77655431 1223345555666666665320
Q ss_pred -------------CCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 677 -------------RPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 677 -------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
.+.++|+|+.+.||++++++.+-|.||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11379999999999999887778999998753
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.29 E-value=5.1e-06 Score=86.14 Aligned_cols=140 Identities=21% Similarity=0.254 Sum_probs=91.4
Q ss_pred CeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCC---CccceeeEEEcCCeeEEEEEeCCC
Q 003156 560 AEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHP---NLISLEGYYWTPQLKLLVSDYAPN 636 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~~~~~~~lV~e~~~~ 636 (843)
+.||.|.++.||++... +|+.++||+..... ......|.+|++.++.+++. .+.+++++. ..++||||+++
T Consensus 21 ~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELA-DGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEETTEEEEEEEET-TSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeCCcchhheEEEEeC-CCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 47899999999999875 78899999864322 22346789999999999865 577777763 36899999999
Q ss_pred CCHH--------H---HHhhcCCCC-----------------CCCChhHHHH---H-----------------HHHHHHH
Q 003156 637 GSLQ--------A---KLHERLPST-----------------PPLSWTNRFK---V-----------------ILGTAKG 668 (843)
Q Consensus 637 gsL~--------~---~l~~~~~~~-----------------~~l~~~~~~~---i-----------------~~~ia~~ 668 (843)
+++. . .||...... ..-+|..... + ...+.+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 8753 1 233321110 0123433210 0 1111122
Q ss_pred HHhhh----hcCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 669 LAHLH----HSFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 669 l~~LH----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
++.+. ....+.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 23332 2235689999999999999984 5889999 654
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.18 E-value=7.5e-06 Score=85.97 Aligned_cols=135 Identities=18% Similarity=0.131 Sum_probs=89.9
Q ss_pred eeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCC---CccceeeEEE-cCCeeEEEEEeCCC
Q 003156 561 EVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHP---NLISLEGYYW-TPQLKLLVSDYAPN 636 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~-~~~~~~lV~e~~~~ 636 (843)
.++.|....||+. |..+++|.-.. ......+.+|+++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 26 ~l~~G~~n~v~~v-----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 26 SLGEGFRNYAILV-----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEECSSEEEEEE-----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred ecCCCcceeEEEE-----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 5788888999987 45678887421 12345788999999999653 3556666664 34557899999999
Q ss_pred CCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhc-----------------------------------------
Q 003156 637 GSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHS----------------------------------------- 675 (843)
Q Consensus 637 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------------------------------------- 675 (843)
.++.+.... .++..++..++.++++.|+.||..
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 888663221 123333334444444444444421
Q ss_pred ----------------CCCCeeecCCCCCCEEEcC---CCC-cEEeeccCcccc
Q 003156 676 ----------------FRPPIIHYNLKPSNILLDD---NYN-PRISDFGLARLL 709 (843)
Q Consensus 676 ----------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfgl~~~~ 709 (843)
..+.++|+|+++.||+++. ++. +.|.||+.+..-
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2346799999999999997 455 489999988653
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.07 E-value=1.9e-05 Score=84.80 Aligned_cols=143 Identities=14% Similarity=0.137 Sum_probs=90.5
Q ss_pred CeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCC--ccceeeEEEcC-CeeEEEEEeCCC
Q 003156 560 AEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPN--LISLEGYYWTP-QLKLLVSDYAPN 636 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~-~~~~lV~e~~~~ 636 (843)
+.++.|....+|+... +|+.+++|..... ..+..|+.+++.+.... +.++++++... +..++||||++|
T Consensus 47 ~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV--GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEECSSEEEEEEEE--TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EECCCCCcceEEEEEE--CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 3688999999999886 5888999976321 36889999999986533 55677777664 567899999987
Q ss_pred CCHHH------------------HHhhcCCCC-CC------------CChhHH---------------------HHHHHH
Q 003156 637 GSLQA------------------KLHERLPST-PP------------LSWTNR---------------------FKVILG 664 (843)
Q Consensus 637 gsL~~------------------~l~~~~~~~-~~------------l~~~~~---------------------~~i~~~ 664 (843)
.++.+ .|+...... .. -+|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 65531 112211000 00 011111 011112
Q ss_pred HHHHHHhhhhc-CCCCeeecCCCCCCEEEcCCCCcEEeeccCccccc
Q 003156 665 TAKGLAHLHHS-FRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLT 710 (843)
Q Consensus 665 ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 710 (843)
+..-+.++... ..+.++|+|+.+.||++++++.+.|.||+.+..-.
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 22222333221 12578999999999999887778899999886543
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.93 E-value=1.4e-05 Score=85.94 Aligned_cols=80 Identities=9% Similarity=0.018 Sum_probs=54.3
Q ss_pred ee-ccccceEEEEEEEC--C----CCeEEEEEEeecCCc--ccChHHHHHHHHHHHhcc-C--CCccceeeEEEcC---C
Q 003156 561 EV-GEGVFGTVYKVSFG--T----QGRMLAVKKLVTSDI--IQYPEDFEREVRVLGKAR-H--PNLISLEGYYWTP---Q 625 (843)
Q Consensus 561 ~i-g~G~~g~Vy~~~~~--~----~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h--~niv~l~g~~~~~---~ 625 (843)
.| +.|....+|+.... . +++.+++|....... ......+.+|+.+++.+. + -.+.++++++.+. +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 57 88889999998763 1 166788887643220 101245778999988884 3 3567788887655 3
Q ss_pred eeEEEEEeCCCCCHH
Q 003156 626 LKLLVSDYAPNGSLQ 640 (843)
Q Consensus 626 ~~~lV~e~~~~gsL~ 640 (843)
..++||||++|.++.
T Consensus 107 ~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 107 TPFFLMDYVEGVVPP 121 (357)
T ss_dssp SCEEEEECCCCBCCC
T ss_pred CceEEEEecCCCChh
Confidence 468999999886653
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.90 E-value=5.3e-06 Score=77.90 Aligned_cols=83 Identities=8% Similarity=0.035 Sum_probs=55.4
Q ss_pred cceEEEccCCcccccCCccccccCCCcEEEcCCCC-CCCCchhhhccc----CCCcEEeccccc-ccccCCccccCCCCC
Q 003156 301 SLIHLDLRNNALYGSIPQEVCESRSLGILQLDGNS-LTGPIPQVIRNC----TSLYLLSLSHNH-LSGSIPKSISNLNKL 374 (843)
Q Consensus 301 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 374 (843)
+|+.||++++.|+..--..+..+++|+.|+|++|. |++.--..+..+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 56677777766665444556677777777777773 665444455543 368888888874 765555556777888
Q ss_pred CEEEccCCc
Q 003156 375 KILKLEFNE 383 (843)
Q Consensus 375 ~~L~L~~N~ 383 (843)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 888887774
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.86 E-value=4.2e-06 Score=78.60 Aligned_cols=92 Identities=9% Similarity=0.061 Sum_probs=74.4
Q ss_pred CCccccccCCCcEEEcCCCCCCCCchhhhcccCCCcEEeccccc-ccccCCccccCC----CCCCEEEccCCc-ccccCC
Q 003156 316 IPQEVCESRSLGILQLDGNSLTGPIPQVIRNCTSLYLLSLSHNH-LSGSIPKSISNL----NKLKILKLEFNE-LSGEIP 389 (843)
Q Consensus 316 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p 389 (843)
+|.....-..|+.||++++.|+..--..+.++++|+.|+|++|. |+..--..++.+ ++|++|+|++|. ||..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 34444344579999999999988777778999999999999995 776555566665 479999999985 887656
Q ss_pred cchhcccccceEeecccc
Q 003156 390 QELGKLASLLAVNVSYNR 407 (843)
Q Consensus 390 ~~~~~l~~L~~l~ls~N~ 407 (843)
..+..+++|+.|++++++
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 678889999999999875
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.84 E-value=3.5e-05 Score=84.27 Aligned_cols=76 Identities=17% Similarity=0.192 Sum_probs=49.5
Q ss_pred CeeccccceEEEEEEECCCCeEEEEEEeecCCc------ccChHHHHHHHHHHHhccC--CCcc-ceeeEEEcCCeeEEE
Q 003156 560 AEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDI------IQYPEDFEREVRVLGKARH--PNLI-SLEGYYWTPQLKLLV 630 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv-~l~g~~~~~~~~~lV 630 (843)
+.+|.|.++.||++....+++.++||....... ....+.+..|.++++.+.. |..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 368999999999997654678899998643211 1123567889999988742 3333 45543 34456899
Q ss_pred EEeCCCC
Q 003156 631 SDYAPNG 637 (843)
Q Consensus 631 ~e~~~~g 637 (843)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.80 E-value=0.00015 Score=77.36 Aligned_cols=140 Identities=16% Similarity=0.218 Sum_probs=80.2
Q ss_pred eeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-----CCCcccee-e--EEEcCCeeEEEEE
Q 003156 561 EVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-----HPNLISLE-G--YYWTPQLKLLVSD 632 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-g--~~~~~~~~~lV~e 632 (843)
.|+.|..+.||++... +..+++|+.... ...+..|+.+++.+. .|.++... | +....+..++|||
T Consensus 39 ~l~gG~~n~~~~v~~~--~~~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 39 VIQGNQMALVWKVHTD--SGAVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp ECC----CEEEEEEET--TEEEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eccccccCcEEEEEeC--CCCEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 4666778999999874 445899987541 234445666665553 24443311 1 1234566789999
Q ss_pred eCCCCCHH--------------HHHhhcCCC-----C-----CCCChhHHH-----------------------------
Q 003156 633 YAPNGSLQ--------------AKLHERLPS-----T-----PPLSWTNRF----------------------------- 659 (843)
Q Consensus 633 ~~~~gsL~--------------~~l~~~~~~-----~-----~~l~~~~~~----------------------------- 659 (843)
|++|.++. ..+|..... . ....|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 122321110 0 012332211
Q ss_pred --HHHHHHHHHHHhhhh----------cCCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 660 --KVILGTAKGLAHLHH----------SFRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 660 --~i~~~ia~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
.+...+..++.+|+. ...+.++|+|+++.||+++.++.+.|.||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123345666663 124589999999999999888899999999774
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.62 E-value=1.2e-05 Score=77.11 Aligned_cols=118 Identities=13% Similarity=0.133 Sum_probs=60.7
Q ss_pred cccCCCCCCEEECCCC-CCccccCCCcCccccCCccCCEEecCCccCccc----CchhhhcCCCCCEEEcCCCccccc--
Q 003156 46 IFNYCSSLNTLNLSNN-HFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGS----IPQGVAALHYLKELLLQGNQFSGP-- 118 (843)
Q Consensus 46 ~f~~l~~L~~L~Ls~N-~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~-- 118 (843)
.+.+-+.|++|+|++| +|..........++..-+.|+.|+|++|+|... +...+..-+.|++|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3444556666666653 554221111122334445566666666666532 223344556666666666666532
Q ss_pred --CCCCCCCCCCCcEEEccCCc---ccc----cCCchhhcccCCcEEEeecCcc
Q 003156 119 --LPADIGFCPHLTTLDLSNNL---FTG----QLPVSLRLLNSMIFISVSNNTL 163 (843)
Q Consensus 119 --~~~~~~~l~~L~~L~L~~N~---l~~----~~~~~~~~l~~L~~L~L~~N~l 163 (843)
+...+...+.|++|+|++|. +.. .+...+..-+.|+.|+++.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 22334455567777776542 231 1223455566777777766654
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.61 E-value=1.3e-05 Score=76.81 Aligned_cols=117 Identities=12% Similarity=0.093 Sum_probs=65.9
Q ss_pred hcCCCCcEEEccCc-ccccc----ccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCccCccc----
Q 003156 24 ENCASLRYLSLAGN-ILQGP----IGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHNLFSGS---- 94 (843)
Q Consensus 24 ~~l~~L~~L~L~~n-~i~~~----~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---- 94 (843)
.+-+.|++|+|++| +|... ....+..-+.|++|+|++|+|..........++..-+.|++|+|++|.|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 44566777777764 66431 2233455567777777777776443333334455556677777777777632
Q ss_pred CchhhhcCCCCCEEEcCCC---cccc----cCCCCCCCCCCCcEEEccCCccc
Q 003156 95 IPQGVAALHYLKELLLQGN---QFSG----PLPADIGFCPHLTTLDLSNNLFT 140 (843)
Q Consensus 95 ~~~~~~~l~~L~~L~L~~n---~l~~----~~~~~~~~l~~L~~L~L~~N~l~ 140 (843)
+...+..-+.|++|+|++| .+.. .+...+...+.|+.|+++.|.+.
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2234445566777777654 2331 12233444566777777766544
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.54 E-value=7.2e-05 Score=82.33 Aligned_cols=80 Identities=13% Similarity=-0.014 Sum_probs=48.5
Q ss_pred CCCeeecCCCCCCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCc--CCCCCchhHHHHHHHHHH
Q 003156 677 RPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQS--LRVNEKCDIYGFGVLILE 754 (843)
Q Consensus 677 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~~Dv~S~Gvil~e 754 (843)
.+.++|+|+++.||+++.++ +++.||+.+..-.+.-+-.. ....-...|.+|+..... .......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999999776 99999999875432211100 000011346666644211 111224556688888888
Q ss_pred HHhC
Q 003156 755 LVTG 758 (843)
Q Consensus 755 lltg 758 (843)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.43 E-value=0.0021 Score=67.01 Aligned_cols=137 Identities=19% Similarity=0.180 Sum_probs=92.1
Q ss_pred eeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhcc---CCCccceeeEEEcCCeeEEEEEeCCCC
Q 003156 561 EVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR---HPNLISLEGYYWTPQLKLLVSDYAPNG 637 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lV~e~~~~g 637 (843)
.|+.|....+|+... +++.+++|..... ....+..|+..++.+. ...+.++++++...+..++||||+++.
T Consensus 43 ~l~gG~~n~~y~v~~--~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 43 KLYSGEMNEIWLIND--EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EECCSSSSEEEEEES--SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred EeCCccceeeeEEEE--CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 689999999999876 5678889986532 2567889999998884 356888898888888899999999987
Q ss_pred CHH-----------HHHhhcCC-CC-----------------CCCChhHHH---HHH--HH--------------HHH-H
Q 003156 638 SLQ-----------AKLHERLP-ST-----------------PPLSWTNRF---KVI--LG--------------TAK-G 668 (843)
Q Consensus 638 sL~-----------~~l~~~~~-~~-----------------~~l~~~~~~---~i~--~~--------------ia~-~ 668 (843)
.+. ..||.... .. ..-+|.... ++. .+ +.. .
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 642 12333221 00 012454322 111 11 111 1
Q ss_pred HHhhhh-cCCCCeeecCCCCCCEEEcCCCCcEEeecc
Q 003156 669 LAHLHH-SFRPPIIHYNLKPSNILLDDNYNPRISDFG 704 (843)
Q Consensus 669 l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 704 (843)
...|.. ...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223321 2256899999999999999887 8888974
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.31 E-value=0.00099 Score=68.96 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=53.1
Q ss_pred CeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccC---CCccceeeEEEcCCeeEEEEEeCCC
Q 003156 560 AEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARH---PNLISLEGYYWTPQLKLLVSDYAPN 636 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~~lV~e~~~~ 636 (843)
+.+|.|..+.||+.+.. +|+.|++|+-.... ......|..|+..|+.+.- -.+.+++++. ..++||||+++
T Consensus 21 ~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELA-DGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEETTEEEEEEEET-TSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EecCCCCCeEEEEEEEC-CCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 46899999999999986 89999999864332 2334568899999998842 2344455432 24789999987
Q ss_pred CCH
Q 003156 637 GSL 639 (843)
Q Consensus 637 gsL 639 (843)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.02 E-value=0.00084 Score=59.97 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=38.9
Q ss_pred cEEecCCCcCc-ccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCCCc
Q 003156 5 KFLDLSNNLLS-GPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNHFS 64 (843)
Q Consensus 5 ~~L~L~~n~i~-~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~ 64 (843)
+.++.++++++ ..+|..+ -++|++|+|++|+|+.++.+.|..+++|++|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l---p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF---PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC---CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC---CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 35677777775 3466442 245777777777777777777777777777777777643
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.81 E-value=0.0014 Score=58.41 Aligned_cols=55 Identities=22% Similarity=0.297 Sum_probs=25.1
Q ss_pred EEEcCCCCCC-CCchhhhcccCCCcEEecccccccccCCccccCCCCCCEEEccCCcc
Q 003156 328 ILQLDGNSLT-GPIPQVIRNCTSLYLLSLSHNHLSGSIPKSISNLNKLKILKLEFNEL 384 (843)
Q Consensus 328 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 384 (843)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 23332221 2355555555555533333444455555555555444
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.76 E-value=0.005 Score=65.08 Aligned_cols=142 Identities=11% Similarity=0.023 Sum_probs=72.6
Q ss_pred eeccccceE-EEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccC--CCccceeeEEEcCCeeEEEEEeCCCC
Q 003156 561 EVGEGVFGT-VYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARH--PNLISLEGYYWTPQLKLLVSDYAPNG 637 (843)
Q Consensus 561 ~ig~G~~g~-Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lV~e~~~~g 637 (843)
.++.|+... +|+.... +|+.+++|...... .+.+..|+.+++.+.. -.+.+++.+..+.+ ++|||++.+.
T Consensus 25 ~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSP-TGAKAVLMDWSPEE----GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp C--------CCEEEECT-TCCEEEEEECCTTT----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred ECCCCCCCceEEEEEcC-CCCeEEEEECCCCC----CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 465555554 6676542 36677777643321 1234556777776642 23455666543333 7899999777
Q ss_pred CHHHHHhhcC---------------------CC-CCCCChhHHH-------H-H------------HHHHHHHHHhhhh-
Q 003156 638 SLQAKLHERL---------------------PS-TPPLSWTNRF-------K-V------------ILGTAKGLAHLHH- 674 (843)
Q Consensus 638 sL~~~l~~~~---------------------~~-~~~l~~~~~~-------~-i------------~~~ia~~l~~LH~- 674 (843)
++.+++.... .. .+.++..... . + ...+...++.+..
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 7765543210 00 0111111000 0 0 0011112222211
Q ss_pred --cCCCCeeecCCCCCCEEEcCC----CCcEEeeccCcccc
Q 003156 675 --SFRPPIIHYNLKPSNILLDDN----YNPRISDFGLARLL 709 (843)
Q Consensus 675 --~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgl~~~~ 709 (843)
...+.++|||+.+.||+++.+ +.+.|.||+.+..-
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 124479999999999999874 67899999988654
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.75 E-value=0.0037 Score=65.04 Aligned_cols=140 Identities=14% Similarity=0.089 Sum_probs=75.2
Q ss_pred cCeeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCc-cceeeEEEcCCeeEEEEEeC-CC
Q 003156 559 AAEVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNL-ISLEGYYWTPQLKLLVSDYA-PN 636 (843)
Q Consensus 559 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~-~~ 636 (843)
.+.|+.|....+|++ +.+++|...... .. ..+..+|+.+++.+....+ .+++++ +++.-++|+||+ ++
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~-~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGT-EE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee------eeEEEECCCCCc-cc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCC
Confidence 347889999999998 357888764321 11 1234568888887753333 345543 344457899999 55
Q ss_pred CCHHH------------------HHhhcCCC-CCCCCh-hHHHHHHHH--------------HHHHHH----hhhh-cCC
Q 003156 637 GSLQA------------------KLHERLPS-TPPLSW-TNRFKVILG--------------TAKGLA----HLHH-SFR 677 (843)
Q Consensus 637 gsL~~------------------~l~~~~~~-~~~l~~-~~~~~i~~~--------------ia~~l~----~LH~-~~~ 677 (843)
.++.. .+|..... ....+. .....+... +...+. .+.. ...
T Consensus 93 ~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~ 172 (301)
T 3dxq_A 93 QTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLP 172 (301)
T ss_dssp EECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCC
Confidence 44421 11111100 000111 111111000 111111 1111 123
Q ss_pred CCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 678 PPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 678 ~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
+.++|+|+.+.||+ ..++.+.+.||..+..-
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 46899999999999 56677899999988643
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.66 E-value=0.0052 Score=67.36 Aligned_cols=71 Identities=10% Similarity=0.193 Sum_probs=48.4
Q ss_pred eeccccceEEEEEEECC-------CCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCc-cceeeEEEcCCeeEEEEE
Q 003156 561 EVGEGVFGTVYKVSFGT-------QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNL-ISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e 632 (843)
.|+.|....||++.... +++.+++|+.... ...+.+..|..+++.+...++ .++++.+. + .+|+|
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 67888899999998752 2578888887321 122566689999988853333 56666543 2 38999
Q ss_pred eCCCCC
Q 003156 633 YAPNGS 638 (843)
Q Consensus 633 ~~~~gs 638 (843)
|++|.+
T Consensus 153 ~l~G~~ 158 (429)
T 1nw1_A 153 YIPSRP 158 (429)
T ss_dssp CCCEEE
T ss_pred EeCCcc
Confidence 998643
No 438
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.58 E-value=0.0062 Score=64.00 Aligned_cols=142 Identities=12% Similarity=0.051 Sum_probs=79.0
Q ss_pred eeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCC--ccceeeE------EEcCCeeEEEEE
Q 003156 561 EVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPN--LISLEGY------YWTPQLKLLVSD 632 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~------~~~~~~~~lV~e 632 (843)
.|+.|....+|+.... +| .+++|...... ..+.+..|+.+++.+.... +.+++.. ....+..++|++
T Consensus 29 ~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTT-KD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EECC---EEEEEEEES-SC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred ccCCCcccceEEEEeC-Cc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 5778888999999874 34 68889875421 2245667888877774212 2233321 122355689999
Q ss_pred eCCCCCHH--------------HHHhhcCCC--CC---C---CChhHHHH------------HHHHHHHHHHhhhhc---
Q 003156 633 YAPNGSLQ--------------AKLHERLPS--TP---P---LSWTNRFK------------VILGTAKGLAHLHHS--- 675 (843)
Q Consensus 633 ~~~~gsL~--------------~~l~~~~~~--~~---~---l~~~~~~~------------i~~~ia~~l~~LH~~--- 675 (843)
|++|..+. ..+|..... .. . ..|..... +...+...+++++..
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 99886431 112221110 00 0 12322110 001133445555432
Q ss_pred -CCCCeeecCCCCCCEEEcCCCCcEEeeccCcc
Q 003156 676 -FRPPIIHYNLKPSNILLDDNYNPRISDFGLAR 707 (843)
Q Consensus 676 -~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 707 (843)
..+.++|+|+.+.||+++++..+.|.||+.+.
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23479999999999999987666899999775
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.56 E-value=0.0083 Score=64.22 Aligned_cols=142 Identities=17% Similarity=0.196 Sum_probs=82.4
Q ss_pred eeccccceEEEEEEECC-------CCeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CCCccceeeEEEcCCeeEEEEE
Q 003156 561 EVGEGVFGTVYKVSFGT-------QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+..|-...+|++.... +++.+++|+... .......+.+|..+++.+. +.-..++++++.+ .+|||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 57778888899988742 357888888522 2234566779999998884 3333556665543 28999
Q ss_pred eCCCCCHHH--------------H---HhhcC-CCCCCCC--hhHHHHHHHHHHH-------------------HHHhhh
Q 003156 633 YAPNGSLQA--------------K---LHERL-PSTPPLS--WTNRFKVILGTAK-------------------GLAHLH 673 (843)
Q Consensus 633 ~~~~gsL~~--------------~---l~~~~-~~~~~l~--~~~~~~i~~~ia~-------------------~l~~LH 673 (843)
|++|.++.. . +|... +...... |.++.++..++.. .+.+|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998765421 1 12111 1112222 3444444433321 233332
Q ss_pred hc-----CCCCeeecCCCCCCEEEcCC----CCcEEeeccCccc
Q 003156 674 HS-----FRPPIIHYNLKPSNILLDDN----YNPRISDFGLARL 708 (843)
Q Consensus 674 ~~-----~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgl~~~ 708 (843)
.. ....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 11 23478999999999999876 7899999998864
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.47 E-value=0.016 Score=60.96 Aligned_cols=142 Identities=15% Similarity=0.145 Sum_probs=80.8
Q ss_pred eeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCC--CccceeeE-----EEcCCeeEEEEEe
Q 003156 561 EVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHP--NLISLEGY-----YWTPQLKLLVSDY 633 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~g~-----~~~~~~~~lV~e~ 633 (843)
.++ |....||++... +|+.+++|...... ...+.+..|..+++.+... .+.+++.. ....+..++||||
T Consensus 33 ~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDE-DRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEC-CSSSEEEEECCT-TCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred eec-CcccceEEEEcC-CCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 456 788899987764 56679999875332 1346677888888887422 23444432 1224456789999
Q ss_pred CCCCCHH-----H---------HHhhcCC-----CCCCCChhHH----HHH---------------HHHHHHHHHhhhhc
Q 003156 634 APNGSLQ-----A---------KLHERLP-----STPPLSWTNR----FKV---------------ILGTAKGLAHLHHS 675 (843)
Q Consensus 634 ~~~gsL~-----~---------~l~~~~~-----~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~~ 675 (843)
++|.++. . .+|.... .....++... ..+ ...+...++.+...
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9875431 1 1222110 0112222211 000 01111222333221
Q ss_pred ----CCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 676 ----FRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 676 ----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
..+.++|+|+++.||+++ + .+.+.||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234689999999999999 4 899999988754
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.41 E-value=0.027 Score=54.01 Aligned_cols=102 Identities=16% Similarity=0.099 Sum_probs=67.0
Q ss_pred CHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCeeecCCCCCCEEEcCCCCcEEeeccCccccccccccee
Q 003156 638 SLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVM 717 (843)
Q Consensus 638 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 717 (843)
||.+.|..+ +.+++++++|.++.|.+++|.-.-.+-. + ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 34 SLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 899999987 5789999999999999999877621101 1 1223346899999999888764 1110
Q ss_pred ccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCC
Q 003156 718 SNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRP 761 (843)
Q Consensus 718 ~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p 761 (843)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ----~~~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS--SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0112367888752 3457888999999999998864444
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.05 E-value=0.032 Score=61.37 Aligned_cols=73 Identities=11% Similarity=0.105 Sum_probs=46.8
Q ss_pred eeccccceEEEEEEECCCCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCCc-cceeeEEEcCCeeEEEEEeCCCCCH
Q 003156 561 EVGEGVFGTVYKVSFGTQGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNL-ISLEGYYWTPQLKLLVSDYAPNGSL 639 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~~~gsL 639 (843)
.|+.|-...+|++.....+..+++|+..... .. .-+..+|..+++.+...++ .++++++ ++ ..|+||++|.++
T Consensus 115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~-~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 115 IINGGITNILIKVKDMSKQAKYLIRLYGPKT-DE-IINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EECC--CEEEEEEEETTTTEEEEEEEECC-C-CS-CSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EcCCCeEeEEEEEEECCCCceEEEEECCCCh-hh-hcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 6888889999999985335788888763321 11 1123589999998865444 4666665 22 359999987543
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.87 E-value=0.013 Score=62.96 Aligned_cols=72 Identities=7% Similarity=0.018 Sum_probs=42.5
Q ss_pred eeccccceEEEEEEECC--------CCeEEEEEEeecCCcccChHHHHHHHHHHHhccCCC-ccceeeEEEcCCeeEEEE
Q 003156 561 EVGEGVFGTVYKVSFGT--------QGRMLAVKKLVTSDIIQYPEDFEREVRVLGKARHPN-LISLEGYYWTPQLKLLVS 631 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~lV~ 631 (843)
.++.|....+|++.... .++.+++|...... .. ..+...|..+++.+...+ +.++++.. . -++||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 57888888999998742 12678888764321 11 113467888888885333 34666543 2 36899
Q ss_pred EeCCCCC
Q 003156 632 DYAPNGS 638 (843)
Q Consensus 632 e~~~~gs 638 (843)
||++|.+
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.67 E-value=0.047 Score=57.63 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=28.3
Q ss_pred CCeeecCCCCCCEEEcCCCCcEEeeccCcccc
Q 003156 678 PPIIHYNLKPSNILLDDNYNPRISDFGLARLL 709 (843)
Q Consensus 678 ~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 709 (843)
..++|+|+.+.||++++++.+.+.||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47999999999999998888999999887643
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.88 E-value=0.11 Score=55.62 Aligned_cols=144 Identities=16% Similarity=0.161 Sum_probs=80.5
Q ss_pred eeccccceEEEEEEECC-------CCeEEEEEEeecCCcc-----------c------ChHHHHHHHHHHHhcc-CCCcc
Q 003156 561 EVGEGVFGTVYKVSFGT-------QGRMLAVKKLVTSDII-----------Q------YPEDFEREVRVLGKAR-HPNLI 615 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~-----------~------~~~~~~~E~~~l~~l~-h~niv 615 (843)
.|..|-...+|++.... .++.|.++..-..... . ..+....|..+++.+. +.-..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 56667778888887742 1367777775332110 0 0122345888888885 44445
Q ss_pred ceeeEEEcCCeeEEEEEeCCCCCHHH--------------H---Hhhc-CCCCCCCC--hhHHHHHHHHHH---------
Q 003156 616 SLEGYYWTPQLKLLVSDYAPNGSLQA--------------K---LHER-LPSTPPLS--WTNRFKVILGTA--------- 666 (843)
Q Consensus 616 ~l~g~~~~~~~~~lV~e~~~~gsL~~--------------~---l~~~-~~~~~~l~--~~~~~~i~~~ia--------- 666 (843)
++++++.. .+|+||+++-+|.. . +|.. .+...... |..+.++..++.
T Consensus 139 kl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 66766532 28999998654421 1 1111 11112223 223333433321
Q ss_pred -------------HHHHh----hhhc-CCCCeeecCCCCCCEEEcCC------CCcEEeeccCccc
Q 003156 667 -------------KGLAH----LHHS-FRPPIIHYNLKPSNILLDDN------YNPRISDFGLARL 708 (843)
Q Consensus 667 -------------~~l~~----LH~~-~~~~ivH~dlk~~Nill~~~------~~~kl~Dfgl~~~ 708 (843)
.-+.. |... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 11222 2221 23478999999999999876 7899999988753
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.58 E-value=0.23 Score=53.72 Aligned_cols=141 Identities=15% Similarity=0.206 Sum_probs=83.2
Q ss_pred eeccccceEEEEEEECCC-------CeEEEEEEeecCCcccChHHHHHHHHHHHhcc-CCCccceeeEEEcCCeeEEEEE
Q 003156 561 EVGEGVFGTVYKVSFGTQ-------GRMLAVKKLVTSDIIQYPEDFEREVRVLGKAR-HPNLISLEGYYWTPQLKLLVSD 632 (843)
Q Consensus 561 ~ig~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e 632 (843)
.+..|-...+|+...... ++.+++|+..... ...-+..+|..+++.+. +.-..++++.+ . -+.|+|
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 677788899999987521 5788888853321 11223467888888885 33234555533 2 268999
Q ss_pred eCCCCCHHH--------------H---HhhcC------C---CCCCCChhHHHHHHHHH-------------------HH
Q 003156 633 YAPNGSLQA--------------K---LHERL------P---STPPLSWTNRFKVILGT-------------------AK 667 (843)
Q Consensus 633 ~~~~gsL~~--------------~---l~~~~------~---~~~~l~~~~~~~i~~~i-------------------a~ 667 (843)
|++|.++.. . +|... + ...+.-|.++.++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865321 1 11110 1 11111244433333222 12
Q ss_pred HHHhhhh---------------------cCCCCeeecCCCCCCEEEcCCCCcEEeeccCccc
Q 003156 668 GLAHLHH---------------------SFRPPIIHYNLKPSNILLDDNYNPRISDFGLARL 708 (843)
Q Consensus 668 ~l~~LH~---------------------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 708 (843)
.+.+|.. .....++|+|+.+.||+ +.++.+.+.||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2333321 11236899999999999 8888999999998864
No 447
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=86.23 E-value=0.6 Score=38.91 Aligned_cols=50 Identities=18% Similarity=0.312 Sum_probs=40.5
Q ss_pred CCcCcccCChhhhhcCCCCcEEEccCccccccccccccCCCCCCEEECCCCC
Q 003156 11 NNLLSGPVPYQLFENCASLRYLSLAGNILQGPIGKIFNYCSSLNTLNLSNNH 62 (843)
Q Consensus 11 ~n~i~~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~Ls~N~ 62 (843)
+..++ .|...+|.+|.+|+.+.|..+ ++.|...+|.++.+|+.+.+....
T Consensus 5 g~~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 45666 788888999999999998654 677888889999999999887754
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=86.00 E-value=3.1 Score=44.62 Aligned_cols=30 Identities=23% Similarity=0.362 Sum_probs=25.3
Q ss_pred CeeecCCCCCCEEE------cCCCCcEEeeccCccc
Q 003156 679 PIIHYNLKPSNILL------DDNYNPRISDFGLARL 708 (843)
Q Consensus 679 ~ivH~dlk~~Nill------~~~~~~kl~Dfgl~~~ 708 (843)
.++|+|+.+.||++ +++..+++.||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998864
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.52 E-value=3.3 Score=39.79 Aligned_cols=115 Identities=12% Similarity=0.191 Sum_probs=77.8
Q ss_pred cCCCccceeeEEEcCCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHH-hhhhcCCCCeeecCCCCC
Q 003156 610 RHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLA-HLHHSFRPPIIHYNLKPS 688 (843)
Q Consensus 610 ~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~dlk~~ 688 (843)
.||+. -..+-.+.+...+.++.-+++.=...++. .+...+++++..++.-.. +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-------~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-------TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-------SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-------cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 57877 33444666777777776655533344433 677889999999988777 66654 78889999
Q ss_pred CEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCCCc
Q 003156 689 NILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVE 763 (843)
Q Consensus 689 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p~~ 763 (843)
|+++|.++.+++.-.|+-..+ +|.-+ +..-=.-.+=+++..++.++..|.
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l-------------------pP~e~------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL-------------------PPDEW------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB-------------------SSCSC------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC-------------------CCCCC------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999987765332 23211 111123346677777888777764
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.56 E-value=0.16 Score=55.81 Aligned_cols=61 Identities=8% Similarity=0.092 Sum_probs=17.5
Q ss_pred CeeccccceEEEEEEECCCCeEEEE------EEeecCCcc-cChHHHHHHHHHHHhccCCCccceeeEEEc
Q 003156 560 AEVGEGVFGTVYKVSFGTQGRMLAV------KKLVTSDII-QYPEDFEREVRVLGKARHPNLISLEGYYWT 623 (843)
Q Consensus 560 ~~ig~G~~g~Vy~~~~~~~~~~vav------K~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 623 (843)
+.+| ||.||+|.+.....+||| |........ +....|.+|..+++..+|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 3566 999999999755568888 766543322 223468889999999999999999988753
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.90 E-value=2.1 Score=40.91 Aligned_cols=124 Identities=12% Similarity=0.150 Sum_probs=82.0
Q ss_pred HHHHHHhccCCCccceeeEEEcCCeeEEEEEeCCCCCHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHhhhhcCCCCee
Q 003156 602 EVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPII 681 (843)
Q Consensus 602 E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iv 681 (843)
|+..|. -.||+.+.. .+-.+.+...+.|+.-+.+.=...++ ..+...+++++..++.-..+++.. +
T Consensus 36 el~LL~-~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik-------~~~~~eKlr~l~ni~~l~~~~~~r-----~ 101 (215)
T 4ann_A 36 LMYLLE-QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK-------SFTKNEKLRYLLNIKNLEEVNRTR-----Y 101 (215)
T ss_dssp GGGGGG-SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG-------GSCHHHHHHHHHHGGGGGGGGGSS-----E
T ss_pred HHHHHh-ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH-------hcCHHHHHHHHHHHHHHHHHhcCc-----e
Confidence 444443 268888877 45566666656566543321111232 367788999999999888777654 7
Q ss_pred ecCCCCCCEEEcCCCCcEEeeccCcccccccccceeccccccccccCCcccccCcCCCCCchhHHHHHHHHHHHHhCCCC
Q 003156 682 HYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRP 761 (843)
Q Consensus 682 H~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Dv~S~Gvil~elltg~~p 761 (843)
|--+.|+|++++.++.+++.-.|+...+. |.- .+...=.-.+=+++..+++++..
T Consensus 102 tf~L~P~NL~f~~~~~p~i~~RGik~~l~-------------------P~~------~~ee~fL~qyKAliiall~~K~~ 156 (215)
T 4ann_A 102 TFVLAPDELFFTRDGLPIAKTRGLQNVVD-------------------PLP------VSEAEFLTRYKALVICAFNEKQS 156 (215)
T ss_dssp ECCCSGGGEEECTTSCEEESCCEETTTBS-------------------CCC------CCHHHHHHHHHHHHHHHHCTTCC
T ss_pred EEEEecceEEEcCCCCEEEEEccCccCCC-------------------CCC------CCHHHHHHHHHHHHHHHHcCCCC
Confidence 88999999999999999998777643222 221 12222234577788889999888
Q ss_pred CcC
Q 003156 762 VEY 764 (843)
Q Consensus 762 ~~~ 764 (843)
|..
T Consensus 157 Fe~ 159 (215)
T 4ann_A 157 FDA 159 (215)
T ss_dssp HHH
T ss_pred HHH
Confidence 853
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=78.03 E-value=4.2 Score=27.60 Aligned_cols=9 Identities=11% Similarity=0.508 Sum_probs=3.9
Q ss_pred HHHHHHHHH
Q 003156 482 SAIVAIIAA 490 (843)
Q Consensus 482 ~~~~~~~~~ 490 (843)
..+++++++
T Consensus 12 ~~Ia~~vVG 20 (44)
T 2jwa_A 12 TSIISAVVG 20 (44)
T ss_dssp HHHHHHHHH
T ss_pred cchHHHHHH
Confidence 344444444
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=73.29 E-value=5.5 Score=27.08 Aligned_cols=9 Identities=22% Similarity=0.150 Sum_probs=4.1
Q ss_pred HHHHHHHHH
Q 003156 482 SAIVAIIAA 490 (843)
Q Consensus 482 ~~~~~~~~~ 490 (843)
.+|.+.+++
T Consensus 10 ~aIA~gVVg 18 (44)
T 2l2t_A 10 PLIAAGVIG 18 (44)
T ss_dssp HHHHHHHHH
T ss_pred ceEEEeehH
Confidence 454444443
No 454
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=69.06 E-value=8.5 Score=27.36 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 003156 482 SAIVAIIAAILIAGGVLVISLLNVSTRRRL 511 (843)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~ 511 (843)
.+++++++++++++.++++.+.+-..+|++
T Consensus 11 iIi~svl~GLLLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 11 VILLSAFAGLLLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 344445555555544444443333344433
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=66.87 E-value=9.5 Score=31.48 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=35.4
Q ss_pred CccccccccccccCCCCCCEEECCCCCCccccCCCcCccccCCccCCEEecCCc
Q 003156 36 GNILQGPIGKIFNYCSSLNTLNLSNNHFSGDLDFASGYGIWSLKRLRTLDLSHN 89 (843)
Q Consensus 36 ~n~i~~~~~~~f~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~~l~~L~~L~L~~n 89 (843)
+..+..|....|.++++|+++.|-.+ ++ .+...+|.+..+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~----~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IG----LLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SS----CCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hh----eEcHHHHhccCCccEEEEcCC
Confidence 45577788888888888888888775 33 244557777888888877654
No 456
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=61.75 E-value=6.4 Score=28.97 Aligned_cols=19 Identities=16% Similarity=0.251 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 003156 483 AIVAIIAAILIAGGVLVIS 501 (843)
Q Consensus 483 ~~~~~~~~~l~~~~~~~~~ 501 (843)
+++++++.++++++.++++
T Consensus 12 ivlGg~~~lll~~glcI~c 30 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFF 30 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHH
Confidence 4555556666666666554
No 457
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=53.37 E-value=25 Score=22.73 Aligned_cols=26 Identities=38% Similarity=0.406 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003156 483 AIVAIIAAILIAGGVLVISLLNVSTR 508 (843)
Q Consensus 483 ~~~~~~~~~l~~~~~~~~~~~~~~~~ 508 (843)
++++.+++.++++++-.+.+..+++.
T Consensus 7 ~ivalivalIiaIVVWtiv~ieYrk~ 32 (36)
T 1pi7_A 7 AIVALVVAIIIAIVVWSIVIIEGRGG 32 (36)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444333333
No 458
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=52.79 E-value=27 Score=24.93 Aligned_cols=29 Identities=10% Similarity=0.126 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003156 482 SAIVAIIAAILIAGGVLVISLLNVSTRRR 510 (843)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~~~~~~~r~ 510 (843)
.+++++++++++++.++++.+.+-..+|+
T Consensus 14 iIi~svl~GLllL~li~~~LwK~GFFkR~ 42 (54)
T 2knc_A 14 WVLVGVLGGLLLLTILVLAMWKVGFFKRN 42 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 33444444445444444443333333443
No 459
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=37.65 E-value=75 Score=24.71 Aligned_cols=20 Identities=15% Similarity=0.147 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003156 480 SVSAIVAIIAAILIAGGVLV 499 (843)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~ 499 (843)
++.+++++++++.+++.+++
T Consensus 13 Iv~gvi~gilliGllllliw 32 (79)
T 2knc_B 13 VLLSVMGAILLIGLAALLIW 32 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555544333
No 460
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=36.15 E-value=41 Score=22.58 Aligned_cols=20 Identities=10% Similarity=0.275 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003156 482 SAIVAIIAAILIAGGVLVIS 501 (843)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~ 501 (843)
.+++++++++++++.++++.
T Consensus 12 iIi~s~l~GLllL~li~~~L 31 (42)
T 2k1a_A 12 WVLVGVLGGLLLLTILVLAM 31 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444445444444433
No 461
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=27.86 E-value=1.1e+02 Score=22.75 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003156 484 IVAIIAAILIAGGVLVIS 501 (843)
Q Consensus 484 ~~~~~~~~l~~~~~~~~~ 501 (843)
...+.++++++++++++.
T Consensus 20 gGLifA~vLfi~GI~iil 37 (67)
T 2jp3_A 20 GGLIFGGLLCIAGIALAL 37 (67)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHH
Confidence 334445555555555554
Done!