BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003157
(843 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C0L8|COG5_MOUSE Conserved oligomeric Golgi complex subunit 5 OS=Mus musculus
GN=Cog5 PE=2 SV=3
Length = 829
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 265/833 (31%), Positives = 435/833 (52%), Gaps = 52/833 (6%)
Query: 31 ATSTVTATATATTASSSSPLDVFANDPILSAFLSPSFSSTSFSSAALSSGSPASTAERLH 90
+T +V + +A ++ + D S FL+ F +++S ++ A +L
Sbjct: 6 STISVAGRGASGSAVVAATVQAILQDDCYSEFLNEDFDVKTYTSQSIHQAVIAEQLAKLA 65
Query: 91 HAIRLLENQLRSEVLSRHTDLLNQLSSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPY 150
I L+ +L +V++RH DLL Q + + E L +++ + +LQ +V R++S++ +PY
Sbjct: 66 QGISQLDKELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAVDRMKSKIVEPY 125
Query: 151 KSIKSKTIQLSNLHRTTELLQHTIRALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIV 210
I ++T QL+ L +LL+ IR L LSK+L+ + E +TKAAQ E+
Sbjct: 126 NKIVARTAQLARLQVACDLLRRIIRILYLSKRLQGQLQGGSRE-----ITKAAQSLNELD 180
Query: 211 TMCKEYDLSGIDVINEELLWVKEVGEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGE 270
+ + DLSGI+VI +LL++ ++ N+A ++LE G+E N QVGT LQVF+NLG
Sbjct: 181 YLSQGIDLSGIEVIENDLLFIARARLEVENQAKRLLEQGVETQNPTQVGTALQVFHNLGT 240
Query: 271 LKVTVEHLVNKYKNMGVKSVNVALDMKAISGGGAGFGPGGIRGSGTPQIGGGVKAREGLW 330
LK TV +V+ Y S+N ALD+K ++ GG + P G R LW
Sbjct: 241 LKETVTSVVDGYCAALEDSINNALDVKVLTQPSQSAVRGGPGRAAMPTPGSTAGFRASLW 300
Query: 331 QRMGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAF 390
M MD + +A V HLQ+VL+KKRDP +H+ ++E+I++G P + W + A
Sbjct: 301 TNMEKLMDHICAACGQVQHLQKVLTKKRDPVSHICFIEEIIKDGQPEILYMFWNAVTLAL 360
Query: 391 ANQMKSAFTASSFVKEIFTSGYPKLLSMIENLLERISR---------------------- 428
++ SA +S F+K+ F YPKLL + +L +R+ +
Sbjct: 361 SSHFHSATNSSMFLKQAFEGEYPKLLRLYNDLWKRLQQSSQNTQGTFSPSGTPDLCVDLP 420
Query: 429 --ETDVKGVL----PAISPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRGSV 482
E D + + P PE + +++ ++ A+L+ L+RL D +N VFP R
Sbjct: 421 HMEDDTQDMFRLKRPDYDPEKA--LKDSLQPYEAAYLSKSLSRLFDPINLVFPPGGRNP- 477
Query: 483 PSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAEYQISTGPEARQIPG 542
PS +++ I I E+ +D LTL V + + K + L A ++E +ST +A Q+ G
Sbjct: 478 PSSDELDGITKTITSELNVAAVDANLTLAVSKNVAKTIQLYAVKSEQLLSTQGDASQVIG 537
Query: 543 PATSAQIKNFALCQHLQEIYTRMSSMI---TGLPPIAAEVLSPSLGTIYGVACDSVTSLF 599
P T Q +N + L +++ ++ ++ + A + + +L TI+ + +++ L
Sbjct: 538 PLTEGQKRNVGVVNSLFKLHQSVTKVVASQSSFSATAEQTIMSALKTIHDLMGNAIQPLL 597
Query: 600 QAMIDGLESCILQIHDQNFSVLGMDAAM-DNNASPYMEELQKCILHFRSEFLSRLLPSSA 658
++ D +E+ I+ +H ++FS + D S YM+ELQ I +++
Sbjct: 598 TSVADAIEAIIITMHQEDFSGASSSSGKPDVPCSLYMKELQGFIARVMNDYFKHF--ECL 655
Query: 659 NTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGKLRMARDMAELELAVGQNLF 718
+ TE I A R + FIR+ASL+RPL E GKLR+A D A++ELAVG
Sbjct: 656 DFVFDNTEAI--------AQRAIELFIRNASLIRPLGEGGKLRLAADFAQMELAVGPLCR 707
Query: 719 PVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPP-SVILHHLYSRGPDELQSPLQRN 777
V LG YR LR+FRPL+F + + SP + D+ P S+I+ L++R P EL+SP QR
Sbjct: 708 RVSDLGKSYRMLRSFRPLLFQTSEHVADSPAVGDIIPFSIIIQFLFTRAPAELKSPFQRA 767
Query: 778 KLTPLQYSLWLDSQ-GEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQL 829
+ + ++S WLD E ++ L+ Y VR+R KEF+PVYP+M+QL
Sbjct: 768 EWSHARFSQWLDDHPSEKDRLLLLRGALEAYVQSVRSRDGKEFAPVYPIMVQL 820
>sp|Q9UP83|COG5_HUMAN Conserved oligomeric Golgi complex subunit 5 OS=Homo sapiens
GN=COG5 PE=1 SV=3
Length = 839
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 263/805 (32%), Positives = 418/805 (51%), Gaps = 67/805 (8%)
Query: 56 DPILSAFLSPSFSSTSFSSAALSSGSPASTAERLHHAIRLLENQLRSEVLSRHTDLLNQL 115
D S FL+ F +++S ++ A +L I L+ +L +V++RH DLL Q
Sbjct: 62 DGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQA 121
Query: 116 SSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPYKSIKSKTIQLSNLHRTTELLQHTIR 175
+ + E L +++ + +LQ +V R+++++ +PY I ++T QL+ L +LL+ IR
Sbjct: 122 TGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIR 181
Query: 176 ALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVG 235
L LSK+L+ + E +TKAAQ E+ + + DLSGI+VI +LL++
Sbjct: 182 ILNLSKRLQGQLQGGSRE-----ITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARAR 236
Query: 236 EKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVALD 295
++ N+A ++LE G+E N QVGT LQVFYNLG LK T+ +V+ Y +++N ALD
Sbjct: 237 LEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALD 296
Query: 296 MKAISGGGAGFGPGGIRGSGTPQIGGGVKAREGLWQRMGTCMDQLHSAVVAVWHLQRVLS 355
+K ++ GG S P G R W M MD +++ V HLQ+VL+
Sbjct: 297 IKVLTQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLA 356
Query: 356 KKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIFTSGYPKL 415
KKRDP +H+ ++E++++G P + W + +A ++Q A +S F+K+ F YPKL
Sbjct: 357 KKRDPVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKL 416
Query: 416 LSMIENLLERISR------------------------ETDVKGVL----PAISPEGKGQM 447
L + +L +R+ + E D + + P PE +
Sbjct: 417 LRLYNDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKA--L 474
Query: 448 IAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRGSVPSKEQISRILSRIQEEIEAVHMDGR 507
+++ ++ A+L+ L+RL D +N VFP R PS +++ I+ I E+ +D
Sbjct: 475 KDSLQPYEAAYLSKSLSRLFDPINLVFPPGGRNP-PSSDELDGIIKTIASELNVAAVDTN 533
Query: 508 LTLLVLREIGKVLILVAERAEYQISTGPEARQIPGPATSAQIKNFALCQHLQEIYTRMSS 567
LTL V + + K + L + ++E +ST +A Q+ GP T Q +N A+ L +++ ++
Sbjct: 534 LTLAVSKNVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTK 593
Query: 568 MITGLPPIAAEVLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFS-VLGMDAA 626
I L A + L S+G D +E+ I+ +H ++FS L
Sbjct: 594 AIHALMENAVQPLLTSVG------------------DAIEAIIITMHQEDFSGSLSSSGK 635
Query: 627 MDNNASPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIR 686
D S YM+ELQ I S++ + TE I R V FIR
Sbjct: 636 PDVPCSLYMKELQGFIARVMSDYFKHF--ECLDFVFDNTEAIAQRAVE--------LFIR 685
Query: 687 HASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGA 746
HASL+RPL E GK+R+A D A++ELAVG V LG YR LR+FRPL+F + + +
Sbjct: 686 HASLIRPLGEGGKMRLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVAS 745
Query: 747 SPLLQD-LPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQ-GEDQIWKGIKATL 804
SP L D +P S+I+ L++R P EL+SP QR + + ++S WLD E I+ L
Sbjct: 746 SPALGDVIPFSIIIQFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGAL 805
Query: 805 DDYAAKVRARGDKEFSPVYPLMLQL 829
+ Y VR+R KEF+PVYP+M+QL
Sbjct: 806 EAYVQSVRSREGKEFAPVYPIMVQL 830
>sp|Q54HE0|COG5_DICDI Conserved oligomeric Golgi complex subunit 5 OS=Dictyostelium
discoideum GN=cog5 PE=3 SV=1
Length = 898
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 193/442 (43%), Gaps = 69/442 (15%)
Query: 55 NDPILSAFLSPSFSSTSFSSAALSSGSPASTAERLHHAIRLLENQLRSEVLSRHTDLLNQ 114
N I + FL F+ ++S AL S + + L R L +L + + + DL
Sbjct: 58 NSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKL 117
Query: 115 LSSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPYKSIKSKTIQLSNLHRTTELLQHTI 174
+++ + T++ VS+L+ S++R+++++S+PY +KS QL + + ELL+ I
Sbjct: 118 ANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLI 177
Query: 175 RALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEV 234
R ++L KKL++ + DL+K+AQ EI + K+ DL+GI++I+ +++W+K
Sbjct: 178 RYIQLVKKLKNHLQAGSR-----DLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTC 232
Query: 235 GEKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKYKNMGVKSVNVAL 294
+++ + +L GME NQ V LQVF+N+ L V +VN +K++ L
Sbjct: 233 SDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALL 292
Query: 295 DMKAISGG----------------------GAGFGPGGIRGSGTPQIGGGVKAREGLWQR 332
++ + + + +W +
Sbjct: 293 NVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLK 352
Query: 333 MGTCMDQLHSAVVAVWHLQRVLSKKRDPFTHVLLLDEVI--------------------- 371
+ +D L+S+++ + HLQRVL K +DP TH L++ ++
Sbjct: 353 FESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQ 412
Query: 372 -----------------QEGDPMLTDRV----WEGLVKAFANQMKSAFTASSFVKEIFTS 410
P+L + + W+ ++K N + A +S+ ++ F
Sbjct: 413 QQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIR 472
Query: 411 GYPKLLSMIENLLERISRETDV 432
YPK+ + ++++ D+
Sbjct: 473 EYPKVSKFFLDFIKKLQNYIDI 494
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 154/350 (44%), Gaps = 66/350 (18%)
Query: 440 SPEGKGQMIAAIEIFQTAFLTLCLTRLSDLVNSVFPMSSRGS------VPSKEQISRILS 493
+ + K + +I +F+ A+L +++S +VN +FP S+ S +P+ +Q+ +
Sbjct: 563 ADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSK 622
Query: 494 RIQEEIEAV------HMDGRLTLLVLREIGKVLILVAERAEYQI---------------- 531
I EIE + + G+L L+V KV+ L + + E +
Sbjct: 623 TIWSEIEWLVGNNDRQLLGKLMLVV----SKVIDLFSSKIESMVQPPGLIVLNSNIGSSS 678
Query: 532 STG-------------PEARQIPGPATSAQIKNFALCQHLQEIYTRMSSMITGLPPIAAE 578
STG T +Q N L ++ + + S++T P+ E
Sbjct: 679 STGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTS-QPLERE 737
Query: 579 ---VLSPSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNA---- 631
V+ SL ++ + + +T L + +E IH++++ + N +
Sbjct: 738 SIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTC 797
Query: 632 SPYMEELQKCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLV 691
S YME + + +F++++L R P + ++SM S++ I ++++ SL+
Sbjct: 798 SSYMESFKTLVNYFQNQYLMRFTPCQ----------LLNNQIKSMISKIFIVYLKYCSLL 847
Query: 692 R-PLSESGKLRMARDMAELELAVGQNLFP--VEQLGAPYRALRAFRPLIF 738
+ P SE+GKL+M D+ LE AV L ++++G Y +R ++ IF
Sbjct: 848 KQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIF 897
>sp|Q9VJD3|COG5_DROME Conserved oligomeric Golgi complex subunit 5 OS=Drosophila
melanogaster GN=fws PE=2 SV=1
Length = 751
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 163/791 (20%), Positives = 327/791 (41%), Gaps = 74/791 (9%)
Query: 56 DPILSAFLSPSFSSTSFSSAALSSGSPASTAERLHHAIRLLENQLRSEVLSRHTDLLNQL 115
DP+ + + + S + +A++S + + L ++ + +L +V +H LL Q
Sbjct: 5 DPVATKTPNAADSDDNDFTASMSHLTIGQQIQELSKQLQNTKEELHQQVRDKHGALLQQA 64
Query: 116 SSLNHAEHALSTVRSAVSSLQSSVRRVRSELSDPYKSIKSKTIQLSNLHRTTELLQHTIR 175
+ + AL+ + V ++ + R+++++ Y+ ++++T L LH + LL+
Sbjct: 65 THAGRFDAALNALAEDVQRVRETGHRLKNQVDTQYQQVENQTQVLGRLHDVSHLLRSAGT 124
Query: 176 ALRLSKKLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINEELLWVKEVG 235
L L+ KL+ D+ + A++H E+ + ++ +L ID I +E +V
Sbjct: 125 LLSLTAKLK----------ATKDVLRLAEIHFELGQLIEDKELKDIDFIQQERAYVISSA 174
Query: 236 EKLRNEAMKVLEGGMEGLNQAQVGTGLQVFYNLGELKVTVEHLVNKY---KNMGVKSVNV 292
+K+RN L G++ N+ QV L++F N L+ ++++L+ + +K
Sbjct: 175 QKIRNLTQMQLVTGLQERNENQVVNALKIFMNFNTLEKSLDNLLATFIADMEQSLKECFA 234
Query: 293 ALDMKAISGGGAGF--GPGGIRGSG-TPQIGGGVKAREGLWQRMGTCM-DQLHSAVVAVW 348
D+ ++ P RG G TPQ+ R W+ + + D+L +
Sbjct: 235 GNDISVLNKSPTHNVSKPAPSRGPGKTPQLTTTQNFRAKFWKSLHWLLYDELFETCTQIK 294
Query: 349 HLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEGLVKAFANQMKSAFTASSFVKEIF 408
L+ L ++ + F + + D + R W+ + + KS V +
Sbjct: 295 LLKTAL-EQINQFGY------TSESSDQCIPQRFWQQVQQLL---RKSFDECPQHVTQTL 344
Query: 409 TSGYPKLLSMIENLLERISRETDVKGVLPAISPEGKGQMIAAIEIFQTAFLTLCLTRLSD 468
G KLL+ L +R+ E + ++ A +E+ +++ C
Sbjct: 345 QEGLSKLLTSARGLEQRLHGEF-----------QFDNELFAPLEV---GYVSKCAANFKA 390
Query: 469 LVNSVFPMSSRGSVPSKEQISRILSRIQEEIEAVHMDGRLTLLVLREIGKVLILVAERAE 528
+ V +P E + + E+ A +D RLT + + + E
Sbjct: 391 CLAGV-------DLPGNETVDNFIRVASTELSAALIDSRLTNAIANVFAACGKELCTKLE 443
Query: 529 YQISTGPEARQI---PGPATSAQIKNFALCQHLQEIYTRMSS----MITGLPPIAAEVLS 581
QI G +++Q+ P + + + ++ RM S P A E++S
Sbjct: 444 AQIKLGADSKQVVDLPNLQQQQNTQLANVLFYYKDSVRRMLSDLHVHFEKTPGTAREIIS 503
Query: 582 PSLGTIYGVACDSVTSLFQAMIDGLESCILQIHDQNFSVLGMDAAMDNNASP--YMEELQ 639
SL + + + +++I + +L +H + G+++ + P YM+ELQ
Sbjct: 504 RSLEQADLLIGTILQQIMESIITTISIIVLSMHREP----GLNSERMSTTGPSMYMKELQ 559
Query: 640 KCILHFRSEFLSRLLPSSANTTTAGTETICTRLVRSMASRVLIFFIRHASLVRPLSESGK 699
+ + S ++ L T G E +A R + F+ + ++RPLS G+
Sbjct: 560 EFVNRSWSHHIA-LFDDKQMTKKCGHE---------LAKRCIELFLHNVCILRPLSSCGR 609
Query: 700 LRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQD--LPPSV 757
R+ +D +E A+ + +LG P R LRA LI +L + +D +P +
Sbjct: 610 QRLKQDCQHMEQALKPLCPNLAELGKPSRLLRAMSLLIVQTAEELVKQTIGEDSLVPSYI 669
Query: 758 ILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQ-GEDQIWKGIKATLDDYAAKVRARGD 816
+L L+ +LQSP + + WLD E + + I L Y R +
Sbjct: 670 VLLLLFGHAGADLQSPHTTANWSNERLIEWLDGHTAEREKLELISGALQRYRDNARRKNI 729
Query: 817 KEFSPVYPLML 827
+++ VYP+M+
Sbjct: 730 QQYDEVYPMMV 740
>sp|Q5XHF8|VIP2_XENLA Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate
kinase 2 OS=Xenopus laevis GN=ppip5k2 PE=2 SV=1
Length = 1131
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 63 LSPSFSSTSFSSAALSSGSPASTAERLHHAIRLLENQLRSEVLS-RHTDLLNQLSSLNHA 121
LSP+ S + S +P T ++++ I+ L +Q+R + + D+ L H+
Sbjct: 655 LSPTGSVSQIKSMHFIK-NPVKTCDKVYSLIQSLTSQIRQRMEDPKFADI-----QLYHS 708
Query: 122 EHALSTVRSAVSSLQSSV-----RRVRSELSDPYKSIKSKTIQLSNLHRTTELLQHTIRA 176
E L + S L+ R S++ D Y IK H + L++T+
Sbjct: 709 E-TLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDV-----QHNCSLKLENTMEL 762
Query: 177 LRLSKKLRDLIAPAE---AEPEKLDLTKA 202
RLSK L D++ P E + PEKL++ K
Sbjct: 763 YRLSKALADIVIPQEYGISRPEKLEIAKG 791
>sp|Q75AA0|PAN1_ASHGO Actin cytoskeleton-regulatory complex protein PAN1 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=PAN1 PE=3 SV=2
Length = 1248
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 86 AERLHHAIRLLENQLRSEVLSRHTD-LLNQLSSLNHAEHAL--STVRSAVSSLQSSVRRV 142
+ER ++R + Q++ E RH D L++Q+ SL +HA S +++ SL SS+ +
Sbjct: 588 SERSQLSLRQKDQQIKDEETMRHVDSLMHQIRSLPMKKHAAVPSDMKARFDSLTSSISTL 647
Query: 143 RSELSDPYKSIKSKTIQLSNLHRTT---------ELLQHTIRALR----LSKKLRDLIAP 189
+ +++ I + + L L + E+ ++ + R L+ ++ L
Sbjct: 648 FNNIAEIDDEITNAKVHLYRLKNPSSIVGSGPNGEVTEYDQKKARQKAVLAARMAALTGT 707
Query: 190 AEAEPEKLDLTKAAQLHCEIVTMCKEYDLSGIDVINE 226
P + DL + Q E V KE +++N+
Sbjct: 708 PIETPSEADLRREEQGLNEEVAKIKEESRKNQEILND 744
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2
SV=1
Length = 1556
Score = 34.7 bits (78), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 20/174 (11%)
Query: 58 ILSAFLSPSFSSTSFSSAALSSGSPAS-------TAERLHHAIRLLENQLRSEVLSRHTD 110
+ SAF S+S L G P + AE L ++ +L E+ D
Sbjct: 507 VFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK----KLTPELFDSQPD 562
Query: 111 LLNQLSSLNHAE----HALSTVRSAVSSLQSSV---RRVRSELSDPYKSIKSKTIQLSN- 162
LL+QL +L + H + VR+ + + + R S + Y ++ ++
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 163 LHRTTELLQHTIRALRLSK-KLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKE 215
L + ++H R R +LI A PEKLDL AA +H E+ M +E
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 20/174 (11%)
Query: 58 ILSAFLSPSFSSTSFSSAALSSGSPAS-------TAERLHHAIRLLENQLRSEVLSRHTD 110
+ SAF S+S L G P + AE L ++ +L E+ D
Sbjct: 507 VFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK----KLTPELFDSQPD 562
Query: 111 LLNQLSSLNHAE----HALSTVRSAVSSLQSSV---RRVRSELSDPYKSIKSKTIQLSN- 162
LL+QL +L + H + VR+ + + + R S + Y ++ ++
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 163 LHRTTELLQHTIRALRLSK-KLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKE 215
L + ++H R R +LI A PEKLDL AA +H E+ M +E
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
>sp|A1YVX4|KDM5C_PIG Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1
Length = 1516
Score = 34.3 bits (77), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 20/174 (11%)
Query: 58 ILSAFLSPSFSSTSFSSAALSSGSPAS-------TAERLHHAIRLLENQLRSEVLSRHTD 110
+ SAF S+S L G P + AE L ++ +L E+ D
Sbjct: 466 VFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK----KLTPELFDSQPD 521
Query: 111 LLNQLSSLNHAE----HALSTVRSAVSSLQSSV---RRVRSELSDPYKSIKSKTIQLSN- 162
LL+QL +L + H + VR+ + + + R S + Y ++ ++
Sbjct: 522 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 581
Query: 163 LHRTTELLQHTIRALRLSK-KLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKE 215
L + ++H R R +LI A PEKLDL AA +H E+ M +E
Sbjct: 582 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 635
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 20/174 (11%)
Query: 58 ILSAFLSPSFSSTSFSSAALSSGSPAS-------TAERLHHAIRLLENQLRSEVLSRHTD 110
+ SAF S+S L G P + AE L ++ +L E+ D
Sbjct: 507 VFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK----KLTPELFDSQPD 562
Query: 111 LLNQLSSLNHAE----HALSTVRSAVSSLQSSV---RRVRSELSDPYKSIKSKTIQLSN- 162
LL+QL +L + H + VR+ + + + R S + Y ++ ++
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 163 LHRTTELLQHTIRALRLSK-KLRDLIAPAEAEPEKLDLTKAAQLHCEIVTMCKE 215
L + ++H R R +LI A PEKLDL AA +H E+ M +E
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 286,766,096
Number of Sequences: 539616
Number of extensions: 11870333
Number of successful extensions: 54897
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 51853
Number of HSP's gapped (non-prelim): 2401
length of query: 843
length of database: 191,569,459
effective HSP length: 126
effective length of query: 717
effective length of database: 123,577,843
effective search space: 88605313431
effective search space used: 88605313431
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)